BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001380
         (1089 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225450563|ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-like [Vitis vinifera]
          Length = 1078

 Score = 1689 bits (4373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 835/1074 (77%), Positives = 934/1074 (86%), Gaps = 8/1074 (0%)

Query: 12   ASSLSLQTKLFFFSPNTKQLRPSSVSSALFQCGAKRTVLGRRMVV--KACVTKVEETDVN 69
            +SS    T  F F P +     S+  S + +  ++   L  R     KACV K+EE +V 
Sbjct: 6    SSSQRHHTTPFIFPPPSI----STPLSLIRRLSSRHVSLRHRRTAAPKACV-KLEEKNVP 60

Query: 70   VSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFL 129
             + +S+WGKVSAVLFDMDGVLCNSEEPSRRA VDVF EMGV+VT EDF+PFMGTGEANFL
Sbjct: 61   ETGKSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVFHEMGVQVTTEDFVPFMGTGEANFL 120

Query: 130  GGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASS 189
            GGVASVKGVKGFD EAAKKRFFEIYL+KYAKPNSGIGFPGALELINQCKS GLKVAVASS
Sbjct: 121  GGVASVKGVKGFDPEAAKKRFFEIYLEKYAKPNSGIGFPGALELINQCKSNGLKVAVASS 180

Query: 190  ADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
            ADRIKVDANLAAAGLP+SMFDAIVSADAFENLKPAPDIFL+ASKIL+VP  ECIVIEDAL
Sbjct: 181  ADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASKILDVPPGECIVIEDAL 240

Query: 250  AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEH 309
            AGVQAAKAAQMRCIAVTTTL EE LK A PSLIRKEIG+VS++DILTGG    NEKIQ  
Sbjct: 241  AGVQAAKAAQMRCIAVTTTLPEETLKAAGPSLIRKEIGNVSVHDILTGGSDCPNEKIQGS 300

Query: 310  ELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLF 369
            + +++  Q S  +LKE  ++ SI +T +      S +GLQGSRR+++RYGSLG+A SCL 
Sbjct: 301  QYINSFEQTSPEVLKEGAESVSIQETNSDGGGVLSIAGLQGSRRDMVRYGSLGIALSCLA 360

Query: 370  FAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPI 429
            FAVSNWKAMQYASPKAIWN+LFGVNRP+F + E G SQ+ RIQQFVNYISD+E+R     
Sbjct: 361  FAVSNWKAMQYASPKAIWNLLFGVNRPTFGKNE-GESQTGRIQQFVNYISDLESRGNATT 419

Query: 430  VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
            VPEFP++LDWLN+APLQ RRDLKGKVVVLDFWTYCCINCMHVLPDLEFLE KYKD PFTV
Sbjct: 420  VPEFPSQLDWLNSAPLQLRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLETKYKDKPFTV 479

Query: 490  VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
            VGVHSAKFDNEKDLEAIRNAVLRYGI+HPVVNDGDM LWRELGVNSWPTFAVVGPNGKLL
Sbjct: 480  VGVHSAKFDNEKDLEAIRNAVLRYGINHPVVNDGDMYLWRELGVNSWPTFAVVGPNGKLL 539

Query: 550  AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            AQL+GEG RKDLDD+V AAL+FYG+KK+LDN+PLPLSLEK+NDPRL TSPLKFPGKLAID
Sbjct: 540  AQLSGEGRRKDLDDIVAAALIFYGEKKMLDNSPLPLSLEKENDPRLLTSPLKFPGKLAID 599

Query: 610  ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
            ++NNRLFISDSNHNRIVVTDL+GN+I+QIGS+GEEGLRDGSFDDATFNRPQGLAYNAKKN
Sbjct: 600  VINNRLFISDSNHNRIVVTDLNGNYILQIGSTGEEGLRDGSFDDATFNRPQGLAYNAKKN 659

Query: 670  LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            LLYVADTENHALREIDFVN+TV+TLAGNGTKGSDYQGG KG +QLLNSPWDVC++PINE 
Sbjct: 660  LLYVADTENHALREIDFVNETVQTLAGNGTKGSDYQGGGKGATQLLNSPWDVCFEPINEI 719

Query: 730  VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
            VYIAMAGQHQIWEH+T+DGVTRAFSGDGYERNLNG SS +TSFAQPSGISLSPD  E+Y+
Sbjct: 720  VYIAMAGQHQIWEHNTLDGVTRAFSGDGYERNLNGYSSTSTSFAQPSGISLSPDLKEVYI 779

Query: 790  ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
            ADSESSSIRAL+LKTGGSRLLAGGD +F DNLF+FGD DG+GSEVLLQHPLGV C K+GQ
Sbjct: 780  ADSESSSIRALDLKTGGSRLLAGGDTVFSDNLFRFGDHDGVGSEVLLQHPLGVSCGKDGQ 839

Query: 850  IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
            IYVADSYNHKIKKLDPA+ RVSTLAG GKAGFKDG ALAAQLSEP+GI+E +NG LFIAD
Sbjct: 840  IYVADSYNHKIKKLDPATGRVSTLAGTGKAGFKDGRALAAQLSEPSGIVEVENGVLFIAD 899

Query: 910  TNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEG 969
            TNN++IRYLDL K+E +L TLELKGVQPP PKSRS KRLRRRSS D QTI  DG  SNEG
Sbjct: 900  TNNSVIRYLDLKKKEADLVTLELKGVQPPIPKSRSLKRLRRRSSADTQTITADGTSSNEG 959

Query: 970  NIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVST 1029
            N+Y++IS+PE YHFSKEA+SKFS++ EPE  ++I PLDG LSP G A LHFRR SPS   
Sbjct: 960  NLYIRISVPEGYHFSKEAQSKFSIETEPETTMVIAPLDGILSPGGFATLHFRRSSPSAFM 1019

Query: 1030 GRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEITLPYDLKPKILTNSL 1083
             R++CKVYYCKEDEVCLY+ + FEVPF++ +P S PAEI+L Y +KPK  TNSL
Sbjct: 1020 ARVNCKVYYCKEDEVCLYQSVAFEVPFRDAIPGSSPAEISLDYAVKPKTPTNSL 1073


>gi|356571070|ref|XP_003553704.1| PREDICTED: NHL repeat-containing protein 2-like [Glycine max]
          Length = 1098

 Score = 1683 bits (4359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 823/1099 (74%), Positives = 925/1099 (84%), Gaps = 26/1099 (2%)

Query: 6    LLSSPPASSLSLQTKLFFFSPNTKQLRPSSVSSALFQCGAKRTVLGRRMVVKACVTKVEE 65
            LLS P AS+    + LF  S N  + +P+S+ S  F C +KR VL  R  VKAC   VEE
Sbjct: 11   LLSRPTAST----STLFLLSSNLTRPKPASLPSRFFHCRSKRLVLTPRFAVKACAVNVEE 66

Query: 66   TDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGE 125
             +V   S  +WGKVSAVLFDMDGVLCNSEEPSRRA VD+FAEMGV+VTV+DF+PFMGTGE
Sbjct: 67   KNVAAIS-GEWGKVSAVLFDMDGVLCNSEEPSRRAGVDLFAEMGVDVTVDDFVPFMGTGE 125

Query: 126  ANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVA 185
            ANFLGGVASVKGVKGFD EAAKKRFFEIYLDKYAKP+SGIGFPGALELI+QCKSKGLKVA
Sbjct: 126  ANFLGGVASVKGVKGFDPEAAKKRFFEIYLDKYAKPDSGIGFPGALELISQCKSKGLKVA 185

Query: 186  VASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVI 245
            VASSADRIKVDANLAAAGLP+SMFDAIVSADAFENLKPAPDIFL+AS+ILNVP++ECIVI
Sbjct: 186  VASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASRILNVPSNECIVI 245

Query: 246  EDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNE- 304
            EDALAGV+AAKAAQMRCIAV TTLS+E L+ A P+LIR  IGSVSL+DIL+GG   Y+  
Sbjct: 246  EDALAGVEAAKAAQMRCIAVRTTLSDEALEPAGPTLIRDNIGSVSLDDILSGGSVGYSMY 305

Query: 305  --------------KIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQG 350
                           I  HE+L+       A+  ++      L+  A         GLQG
Sbjct: 306  YFSDNYSWIVLKSVDIILHEVLY-----RHAIADKRMQGSETLNDFAESSSTVLAGGLQG 360

Query: 351  SRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSER 410
            SRR+ILR+GSLG+A SCLFF +SNWKAMQYASPKA+WN LFGV +P  EQ E  +S+ +R
Sbjct: 361  SRRDILRFGSLGIAISCLFFTISNWKAMQYASPKAVWNKLFGVTQPPLEQKED-NSRDDR 419

Query: 411  IQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMH 470
            IQQFVNYISD+E+R    IVPEFP+KLDWLNTAPLQFRRDLKGKVV+LDFWTYCCINCMH
Sbjct: 420  IQQFVNYISDLESRGNAQIVPEFPSKLDWLNTAPLQFRRDLKGKVVLLDFWTYCCINCMH 479

Query: 471  VLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530
            VLP+L+ LEKKYKDMPF VVGVHSAKFDNEKD EAIRNAVLRYGISHPVVNDGDM LWR+
Sbjct: 480  VLPELDVLEKKYKDMPFVVVGVHSAKFDNEKDSEAIRNAVLRYGISHPVVNDGDMYLWRK 539

Query: 531  LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKD 590
            LG+NSWPTFA+VGPNGK+LAQLAGEGH+KDLDD VEAALLFYGK+ +LDNTP+ LSLEKD
Sbjct: 540  LGINSWPTFAIVGPNGKVLAQLAGEGHKKDLDDFVEAALLFYGKQNMLDNTPISLSLEKD 599

Query: 591  NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
            NDPRL TSPLKFPGKLAID+LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL+DGS
Sbjct: 600  NDPRLSTSPLKFPGKLAIDVLNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLQDGS 659

Query: 651  FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
            FDDATFNRPQGLAYNAKKN+LYVADTENHALREIDFVN+ VRTLAGNGTKGSDY GG KG
Sbjct: 660  FDDATFNRPQGLAYNAKKNILYVADTENHALREIDFVNEKVRTLAGNGTKGSDYVGGGKG 719

Query: 711  TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
             SQLLNSPWDVC+ P +EK+YIAMAGQHQIWEH+ +D  TR FSGDGYERNLNGSSS +T
Sbjct: 720  DSQLLNSPWDVCFHPFDEKIYIAMAGQHQIWEHNLLDATTRVFSGDGYERNLNGSSSTST 779

Query: 771  SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            SFAQPSG+SLS D  EIY+ADSESSSIRA++LKT GS+LLAGGDP+F DNLFKFGD+DG+
Sbjct: 780  SFAQPSGLSLSQDLREIYIADSESSSIRAMDLKTRGSQLLAGGDPMFADNLFKFGDQDGI 839

Query: 831  GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
            GSEVLLQHPLGV C  +G+IY+ADSYNHKIKKLDP S RVST+AG GKAGFKDG A+ AQ
Sbjct: 840  GSEVLLQHPLGVVCGNDGEIYIADSYNHKIKKLDPTSKRVSTIAGTGKAGFKDGTAVKAQ 899

Query: 891  LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRR 950
            LSEP+GI+E   G LFIADTNN++IRYLDLN  E EL+TLELKG+QPP PKSRS KRLRR
Sbjct: 900  LSEPSGIVEGNKGRLFIADTNNSLIRYLDLNINETELRTLELKGIQPPKPKSRSFKRLRR 959

Query: 951  RSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNL 1010
            R+S D   I +D   SNEGN+ +KISLP EYHFSKEARS+FSVD+EPE+AV IDPLDG L
Sbjct: 960  RASADTMPITIDTISSNEGNLSIKISLPNEYHFSKEARSRFSVDIEPEDAVNIDPLDGFL 1019

Query: 1011 SPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEITL 1070
            SPEGSA LHF+R S + S GRI+CKVYYCKEDEVCLY+ LLFEVPFQE V N   A++TL
Sbjct: 1020 SPEGSATLHFKRSSNNASVGRINCKVYYCKEDEVCLYQSLLFEVPFQEGVSNPAEADVTL 1079

Query: 1071 PYDLKPKILTNSLQLPVAP 1089
             + +KPK  T++    VAP
Sbjct: 1080 AHFVKPKTSTSNFLQSVAP 1098


>gi|255542920|ref|XP_002512523.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
 gi|223548484|gb|EEF49975.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
          Length = 1016

 Score = 1673 bits (4333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 829/1044 (79%), Positives = 906/1044 (86%), Gaps = 38/1044 (3%)

Query: 54   MVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVT 113
            M VKACV   ++  V    E+KW KVSAVLFDMDGVLCNSEEPSR AAVDVFAEMGV+VT
Sbjct: 1    MDVKACVKVEQKKGVAEVEETKWRKVSAVLFDMDGVLCNSEEPSRLAAVDVFAEMGVDVT 60

Query: 114  VEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALEL 173
            VEDF+PFMGTGEANFLGGVA+VKGV+GF+++AAKKRFFEIYL+KYAKPNSGIGFPGALEL
Sbjct: 61   VEDFVPFMGTGEANFLGGVANVKGVQGFNTDAAKKRFFEIYLEKYAKPNSGIGFPGALEL 120

Query: 174  INQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASK 233
            I QCK KGLKVAVASSADRIKVDANLAAAGLP+SMFDAIVSADAFENLKPAPDIFL+ASK
Sbjct: 121  ITQCKEKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASK 180

Query: 234  ILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLND 293
            IL VP SECIVIEDALAGVQAA+AAQMRCIAV TTLSEE L  ASPSLIR +IGSVSL+D
Sbjct: 181  ILEVPPSECIVIEDALAGVQAAQAAQMRCIAVKTTLSEETLSNASPSLIRNDIGSVSLDD 240

Query: 294  ILTGGGGSYNEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRR 353
            IL+GG   YN                         N S  +  A ++   S  GLQ SRR
Sbjct: 241  ILSGGSDGYN-------------------------NGSFPNNIATND---SVGGLQASRR 272

Query: 354  EILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQ 413
             ILRYGSLG+A SCLFF +SNWKAMQYASP+AIWN+LF VN+  FE+ E       R+QQ
Sbjct: 273  NILRYGSLGIALSCLFFTISNWKAMQYASPQAIWNLLFRVNKLDFEKNENTGKSQSRVQQ 332

Query: 414  FVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRR---------DLKGKVVVLDFWTYC 464
            FVNYISD+E R+T  IVPEFPAKLDWLNTAPLQFRR         +LKGKVV+LDFWTYC
Sbjct: 333  FVNYISDLETRETARIVPEFPAKLDWLNTAPLQFRRANYFSLFVQELKGKVVILDFWTYC 392

Query: 465  CINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGD 524
            CINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRY ISHPVVNDGD
Sbjct: 393  CINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYNISHPVVNDGD 452

Query: 525  MNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP 584
            M LWRELG++SWPTFA+VGPNGKLLAQ++GEGHRKDLD+LVEAALL+YG KK+LD+T +P
Sbjct: 453  MYLWRELGISSWPTFALVGPNGKLLAQISGEGHRKDLDELVEAALLYYGGKKILDSTSIP 512

Query: 585  LSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEE 644
            LSLEKDNDPRL TSPLKFPGKLAID+LN RLFISDSNHNRIVVTDLDGNFIVQIGS+GEE
Sbjct: 513  LSLEKDNDPRLVTSPLKFPGKLAIDVLNKRLFISDSNHNRIVVTDLDGNFIVQIGSTGEE 572

Query: 645  GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
            GLRDG FD+ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN+ VRTLAGNGTKGSDY
Sbjct: 573  GLRDGPFDEATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNEMVRTLAGNGTKGSDY 632

Query: 705  QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNG 764
             GG+KGT Q+LNSPWDVC++P+NEKVYIAMAGQHQIWEH+  DGVTRAFSGDGYERNLNG
Sbjct: 633  VGGQKGTIQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEHNNADGVTRAFSGDGYERNLNG 692

Query: 765  SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
            SSS +TSFAQPSGISLSPD  E+Y+ADSESSSIR L+L TGGSRLLAGGDPIF DNLFKF
Sbjct: 693  SSSTSTSFAQPSGISLSPDLKEVYIADSESSSIRVLDLTTGGSRLLAGGDPIFSDNLFKF 752

Query: 825  GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG 884
            GD DG+GSEVLLQHPLGV CAKNGQIYVADSYNHKIKKLDPA+ RVST+AG GKAGFKDG
Sbjct: 753  GDHDGIGSEVLLQHPLGVLCAKNGQIYVADSYNHKIKKLDPATKRVSTIAGTGKAGFKDG 812

Query: 885  AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRS 944
             ALAAQLSEP+GIIEA+NG L IADTNN+IIRYLDLNKEE EL+TLELKGVQP  PKS+S
Sbjct: 813  KALAAQLSEPSGIIEAENGRLIIADTNNSIIRYLDLNKEEAELRTLELKGVQPTAPKSKS 872

Query: 945  PKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIID 1004
             KRLRRRSS D QTI +DGG S EG++ LKISLPEEYHFSKEARSKF V+ EPENAV+ID
Sbjct: 873  LKRLRRRSSADVQTIKIDGGSSKEGDLCLKISLPEEYHFSKEARSKFIVETEPENAVLID 932

Query: 1005 PLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSP 1064
            P DG LSPEG+A+LHFRR S S STGRI+CKVYYCKEDEVCLY+ L FEVPFQ EV +S 
Sbjct: 933  PSDGYLSPEGTAILHFRRSSASASTGRINCKVYYCKEDEVCLYESLQFEVPFQ-EVQDSI 991

Query: 1065 PAEITLPYDLKPKILTNSLQLPVA 1088
            P+EIT+ Y +KPK  TNSLQLPV+
Sbjct: 992  PSEITVAYAVKPKASTNSLQLPVS 1015


>gi|449435944|ref|XP_004135754.1| PREDICTED: NHL repeat-containing protein 2-like [Cucumis sativus]
          Length = 1086

 Score = 1662 bits (4303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 811/1096 (73%), Positives = 934/1096 (85%), Gaps = 22/1096 (2%)

Query: 2    IAMKLLS-SPPASSLSLQTKLFFFSPNTKQLRPSSVSSALFQCGAKRTVLGRRMVVKACV 60
            + +K LS SPP        +L FFS   K  +P+SV   L Q  ++R V+ R+M VKACV
Sbjct: 1    MTLKYLSPSPP---FLTSARLCFFSSKLKGTKPTSVPYYLLQWRSQRLVVPRKMAVKACV 57

Query: 61   TKVEETDVNVSS-ESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLP 119
             KVEE+    S+ +S+WGKVSAVLFDMDGVLCNSE+ SRRAAVDVF E+GVEVT E+F+P
Sbjct: 58   -KVEESSPKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFRELGVEVTPEEFVP 116

Query: 120  FMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKS 179
            FMGTGEANFLGGVASVKGV GF  EAAKKRFFEIYL+KYAKPNSGIGFPGALELI +CKS
Sbjct: 117  FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKYAKPNSGIGFPGALELITECKS 176

Query: 180  KGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPT 239
            KGLKVAVASSADRIKVDANLAAAGLP+SMFDAIVSADAFENLKPAPDIF++ASK+LNVP+
Sbjct: 177  KGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFIAASKLLNVPS 236

Query: 240  SECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGG 299
             ECIVIEDALAGVQAA+AA+MRCIAV TTLS+E LK A PSLIR +IG+++++DIL+GG 
Sbjct: 237  DECIVIEDALAGVQAAQAAKMRCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGS 296

Query: 300  GSY---------NEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQG 350
             +Y         NEKIQE + L  + Q S        D  ++ D  AA++  S    L G
Sbjct: 297  DAYSIIPFSLIRNEKIQEPQFLQTSEQLSQQKYTAGIDAAAVQDLDAANDGSSPIGRLLG 356

Query: 351  SRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSER 410
            +RR+I+RYGSLG+AFSCL F + NWKAMQYASPKAIWN+LFGVN+PSF+     +  S R
Sbjct: 357  TRRDIVRYGSLGIAFSCLIFTIRNWKAMQYASPKAIWNLLFGVNQPSFQN----NVNSGR 412

Query: 411  IQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMH 470
            IQ+F+ YIS++E R T P+VPEFP+KLDWLNT+PLQF +DLKGKVV+LDFWTYCCINCMH
Sbjct: 413  IQRFMEYISEIETRGTAPVVPEFPSKLDWLNTSPLQFSKDLKGKVVLLDFWTYCCINCMH 472

Query: 471  VLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530
            VLPDLE+LEKKY D  F VVGVHSAKFDNEKDLEAIRNAVLRYGI+HPVVNDGDM LWRE
Sbjct: 473  VLPDLEYLEKKYNDKAFAVVGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMFLWRE 532

Query: 531  LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKD 590
            LG+NSWPTFA+V PNGKLLAQ++GEG RKDLDD VEAALLFYG+KK+LD+ PLPL LEKD
Sbjct: 533  LGINSWPTFAIVSPNGKLLAQISGEGRRKDLDDFVEAALLFYGEKKILDSRPLPLRLEKD 592

Query: 591  NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
            NDPRL  SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDL GNF++QIGS+GE+GLRDG+
Sbjct: 593  NDPRLIASPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLSGNFLLQIGSTGEDGLRDGN 652

Query: 651  FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
            FDDATFNRPQGLAYNAKKNLLYVADTENHALRE+DFV + VRTLAG+G+KGSDYQGG++G
Sbjct: 653  FDDATFNRPQGLAYNAKKNLLYVADTENHALREVDFVKERVRTLAGDGSKGSDYQGGKEG 712

Query: 711  TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
            TSQLLNSPWDVC++PINEKVYIAMAGQHQIW H T++GVT++FSGDG+ERNLNGSS+ +T
Sbjct: 713  TSQLLNSPWDVCFEPINEKVYIAMAGQHQIWVHDTLNGVTKSFSGDGFERNLNGSSATST 772

Query: 771  SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            SFAQPSG+SLSPD  E+Y+ADSESSSIRA++LKTG SRLLAGGDPIF DNLFKFGD DG+
Sbjct: 773  SFAQPSGLSLSPDLSEVYIADSESSSIRAVDLKTGASRLLAGGDPIFSDNLFKFGDHDGV 832

Query: 831  GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
            GSEVLLQHPLGV+C+K+GQIYVADSYNHK+K LDP S +V+T+AG GKAGFKDG AL AQ
Sbjct: 833  GSEVLLQHPLGVFCSKDGQIYVADSYNHKVKMLDPVSKKVTTIAGTGKAGFKDGTALEAQ 892

Query: 891  LSEPAGIIEAQNGNLFIADTNNNIIRYLDL-NKEEPELQTLELKGVQPPTPKSRSPKRLR 949
            LSEP+GI EA  G LFIADTNNN+IRYL L N+E+ +L TLELKGVQPP PK++S KRLR
Sbjct: 893  LSEPSGITEA-GGRLFIADTNNNVIRYLYLNNREQSQLLTLELKGVQPPNPKTKSLKRLR 951

Query: 950  RRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGN 1009
            RR SPD QTI+VDGG  +EGN+ LKISLP+EYHFSKEARSKF+V+ EPE  + IDP DG 
Sbjct: 952  RR-SPDTQTIIVDGGAFSEGNLSLKISLPKEYHFSKEARSKFNVETEPETVLSIDPSDGY 1010

Query: 1010 LSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEIT 1069
            LSPEG A LHF+R SP+ S GRISCKVYYCKEDEVCLYK LLFEVPF+EEV  +  AEIT
Sbjct: 1011 LSPEGFASLHFKRSSPAASLGRISCKVYYCKEDEVCLYKSLLFEVPFREEVSETSKAEIT 1070

Query: 1070 LPYDLKPKILTNSLQL 1085
            L +++KPK  T+SL L
Sbjct: 1071 LAFEVKPKTSTSSLPL 1086


>gi|224125014|ref|XP_002319481.1| predicted protein [Populus trichocarpa]
 gi|222857857|gb|EEE95404.1| predicted protein [Populus trichocarpa]
          Length = 1065

 Score = 1660 bits (4298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 812/1069 (75%), Positives = 912/1069 (85%), Gaps = 33/1069 (3%)

Query: 21   LFFFSPNTKQLRPSSVSSALFQCGAKRTVLGRRMVVKACVTKVEETDVNVSSESKWGKVS 80
            LFFF+ N K  +P S    LFQ  +K  V  ++M VKACV KVE+      + ++WGKVS
Sbjct: 26   LFFFTSNPKGSKPISSLVQLFQRRSKNLVFNKKMEVKACV-KVEQKSETEVTGNEWGKVS 84

Query: 81   AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
            AVLFDMDGVLCNSEEPSR A VDVFAEMGVEVTV+DF+PFMGTGEANFLGGVA+VKGVKG
Sbjct: 85   AVLFDMDGVLCNSEEPSRMAGVDVFAEMGVEVTVDDFVPFMGTGEANFLGGVANVKGVKG 144

Query: 141  FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
            FD+E AKKRFFEIYLDKYAKPNSGIGF GALELI QCK+KGLKVAVASSADRIKVDANLA
Sbjct: 145  FDTEMAKKRFFEIYLDKYAKPNSGIGFLGALELITQCKNKGLKVAVASSADRIKVDANLA 204

Query: 201  AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
            AAGLPVSMFDAIVSADAFENLKPAPDIFL+ASKIL VPTSECIVIEDALAGVQAAKAAQM
Sbjct: 205  AAGLPVSMFDAIVSADAFENLKPAPDIFLAASKILGVPTSECIVIEDALAGVQAAKAAQM 264

Query: 261  RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAASQNST 320
            RCIAVTTTLSEE L +ASPSLIRKEIG++SL+DIL GG                      
Sbjct: 265  RCIAVTTTLSEEILNDASPSLIRKEIGNISLDDILDGG---------------------- 302

Query: 321  ALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQY 380
                E+T+N SIL+  A ++  SS  GLQGSRR+I+RYGSLG+A SCL+F ++NWKAMQY
Sbjct: 303  ---SERTENGSILNQVATNDNVSSIKGLQGSRRDIVRYGSLGIALSCLYFTITNWKAMQY 359

Query: 381  ASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWL 440
            ASPK IWN LFGV+ PSFEQ E         +QFV YISD+E +    IVPEFP KLDWL
Sbjct: 360  ASPKGIWNKLFGVDTPSFEQNESIGI----FKQFVKYISDLETKGNATIVPEFPGKLDWL 415

Query: 441  NTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500
            NT+PLQF+RDLKGKVV+LDFWTYCCINCMHVLPDLE+LEKKYKD PFTVVGVHSAKFDNE
Sbjct: 416  NTSPLQFQRDLKGKVVLLDFWTYCCINCMHVLPDLEYLEKKYKDAPFTVVGVHSAKFDNE 475

Query: 501  KDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKD 560
            KDLEAIRNAVLRY ISHPVVNDGDM LWRELGV+SWPTFA+VGPNGKL+AQL+GEG RKD
Sbjct: 476  KDLEAIRNAVLRYNISHPVVNDGDMFLWRELGVSSWPTFAIVGPNGKLIAQLSGEGRRKD 535

Query: 561  LDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDS 620
            LDDL+EA LL+YG++K+L++ P+PLSLEK+NDPRL +SPLKFPGKLAID+LNNRLFISDS
Sbjct: 536  LDDLIEAVLLYYGERKILNSRPIPLSLEKNNDPRLLSSPLKFPGKLAIDVLNNRLFISDS 595

Query: 621  NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680
            NHNRIVVTDLDGNFI QIGSSGEEGLRDGSFDDATFNRPQGLAYN+KKN+LYVADTENHA
Sbjct: 596  NHNRIVVTDLDGNFIAQIGSSGEEGLRDGSFDDATFNRPQGLAYNSKKNILYVADTENHA 655

Query: 681  LREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH 738
            LRE+DFV++ VRTLAGNGTKGSDYQG  G   T  +LNSPWDV ++P+NEKVYIAMAGQH
Sbjct: 656  LREVDFVSEKVRTLAGNGTKGSDYQGAFGASLTFHVLNSPWDVSFEPVNEKVYIAMAGQH 715

Query: 739  QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIR 798
            QIWEH   +GVTRAFSGDGYERNLNGSS  +TSFAQPSG+SLSPDF E+YVADSESSSIR
Sbjct: 716  QIWEHDISNGVTRAFSGDGYERNLNGSSPTSTSFAQPSGVSLSPDF-ELYVADSESSSIR 774

Query: 799  ALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNH 858
             L+L+T G+RLLAGGDPIFPDNLFKFGD DG+GSEVLLQHPLGV  AK+G IY+ADSYNH
Sbjct: 775  VLSLRTKGTRLLAGGDPIFPDNLFKFGDHDGIGSEVLLQHPLGVLHAKDGLIYIADSYNH 834

Query: 859  KIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            KIKKLD A+ RV+T+AG GKAGFKDG AL AQLSEPAG+IEA+NG L IADTNN++IRYL
Sbjct: 835  KIKKLDLATKRVTTIAGTGKAGFKDGKALTAQLSEPAGLIEAENGRLIIADTNNSVIRYL 894

Query: 919  DLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLP 978
            DLNK E EL TLELKGVQPP  KS+S KRLR+RSS D +TI VDG  S+EGN+ +KIS+P
Sbjct: 895  DLNKGEAELLTLELKGVQPPASKSKSLKRLRKRSSADTETIKVDGCSSSEGNMRIKISVP 954

Query: 979  EEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYY 1038
            EEYHFSKEARSKFSV+ EPEN V+IDP +G LS  G+A +HF+R   S S GRI+CKVYY
Sbjct: 955  EEYHFSKEARSKFSVETEPENTVLIDPSEGYLSSGGTASIHFKRSDASPSMGRINCKVYY 1014

Query: 1039 CKEDEVCLYKPLLFEVPFQEEVPNSPPAEITLPYDLKPKILTNSLQLPV 1087
            CKEDEVCLY+ LLFEVPFQEE P+S P+EITL Y +KPK   ++LQLP+
Sbjct: 1015 CKEDEVCLYQSLLFEVPFQEETPDSTPSEITLAYFVKPKSSPSNLQLPI 1063


>gi|296089788|emb|CBI39607.3| unnamed protein product [Vitis vinifera]
          Length = 1002

 Score = 1653 bits (4281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 806/998 (80%), Positives = 893/998 (89%), Gaps = 1/998 (0%)

Query: 86   MDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEA 145
            MDGVLCNSEEPSRRA VDVF EMGV+VT EDF+PFMGTGEANFLGGVASVKGVKGFD EA
Sbjct: 1    MDGVLCNSEEPSRRAGVDVFHEMGVQVTTEDFVPFMGTGEANFLGGVASVKGVKGFDPEA 60

Query: 146  AKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLP 205
            AKKRFFEIYL+KYAKPNSGIGFPGALELINQCKS GLKVAVASSADRIKVDANLAAAGLP
Sbjct: 61   AKKRFFEIYLEKYAKPNSGIGFPGALELINQCKSNGLKVAVASSADRIKVDANLAAAGLP 120

Query: 206  VSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAV 265
            +SMFDAIVSADAFENLKPAPDIFL+ASKIL+VP  ECIVIEDALAGVQAAKAAQMRCIAV
Sbjct: 121  LSMFDAIVSADAFENLKPAPDIFLAASKILDVPPGECIVIEDALAGVQAAKAAQMRCIAV 180

Query: 266  TTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAASQNSTALLKE 325
            TTTL EE LK A PSLIRKEIG+VS++DILTGG    NEKIQ  + +++  Q S  +LKE
Sbjct: 181  TTTLPEETLKAAGPSLIRKEIGNVSVHDILTGGSDCPNEKIQGSQYINSFEQTSPEVLKE 240

Query: 326  KTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKA 385
              ++ SI +T +      S +GLQGSRR+++RYGSLG+A SCL FAVSNWKAMQYASPKA
Sbjct: 241  GAESVSIQETNSDGGGVLSIAGLQGSRRDMVRYGSLGIALSCLAFAVSNWKAMQYASPKA 300

Query: 386  IWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPL 445
            IWN+LFGVNRP+F + EG  SQ+ RIQQFVNYISD+E+R     VPEFP++LDWLN+APL
Sbjct: 301  IWNLLFGVNRPTFGKNEG-ESQTGRIQQFVNYISDLESRGNATTVPEFPSQLDWLNSAPL 359

Query: 446  QFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEA 505
            Q RRDLKGKVVVLDFWTYCCINCMHVLPDLEFLE KYKD PFTVVGVHSAKFDNEKDLEA
Sbjct: 360  QLRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLETKYKDKPFTVVGVHSAKFDNEKDLEA 419

Query: 506  IRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLV 565
            IRNAVLRYGI+HPVVNDGDM LWRELGVNSWPTFAVVGPNGKLLAQL+GEG RKDLDD+V
Sbjct: 420  IRNAVLRYGINHPVVNDGDMYLWRELGVNSWPTFAVVGPNGKLLAQLSGEGRRKDLDDIV 479

Query: 566  EAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRI 625
             AAL+FYG+KK+LDN+PLPLSLEK+NDPRL TSPLKFPGKLAID++NNRLFISDSNHNRI
Sbjct: 480  AAALIFYGEKKMLDNSPLPLSLEKENDPRLLTSPLKFPGKLAIDVINNRLFISDSNHNRI 539

Query: 626  VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
            VVTDL+GN+I+QIGS+GEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID
Sbjct: 540  VVTDLNGNYILQIGSTGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 599

Query: 686  FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
            FVN+TV+TLAGNGTKGSDYQGG KG +QLLNSPWDVC++PINE VYIAMAGQHQIWEH+T
Sbjct: 600  FVNETVQTLAGNGTKGSDYQGGGKGATQLLNSPWDVCFEPINEIVYIAMAGQHQIWEHNT 659

Query: 746  VDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
            +DGVTRAFSGDGYERNLNG SS +TSFAQPSGISLSPD  E+Y+ADSESSSIRAL+LKTG
Sbjct: 660  LDGVTRAFSGDGYERNLNGYSSTSTSFAQPSGISLSPDLKEVYIADSESSSIRALDLKTG 719

Query: 806  GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
            GSRLLAGGD +F DNLF+FGD DG+GSEVLLQHPLGV C K+GQIYVADSYNHKIKKLDP
Sbjct: 720  GSRLLAGGDTVFSDNLFRFGDHDGVGSEVLLQHPLGVSCGKDGQIYVADSYNHKIKKLDP 779

Query: 866  ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEP 925
            A+ RVSTLAG GKAGFKDG ALAAQLSEP+GI+E +NG LFIADTNN++IRYLDL K+E 
Sbjct: 780  ATGRVSTLAGTGKAGFKDGRALAAQLSEPSGIVEVENGVLFIADTNNSVIRYLDLKKKEA 839

Query: 926  ELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSK 985
            +L TLELKGVQPP PKSRS KRLRRRSS D QTI  DG  SNEGN+Y++IS+PE YHFSK
Sbjct: 840  DLVTLELKGVQPPIPKSRSLKRLRRRSSADTQTITADGTSSNEGNLYIRISVPEGYHFSK 899

Query: 986  EARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVC 1045
            EA+SKFS++ EPE  ++I PLDG LSP G A LHFRR SPS    R++CKVYYCKEDEVC
Sbjct: 900  EAQSKFSIETEPETTMVIAPLDGILSPGGFATLHFRRSSPSAFMARVNCKVYYCKEDEVC 959

Query: 1046 LYKPLLFEVPFQEEVPNSPPAEITLPYDLKPKILTNSL 1083
            LY+ + FEVPF++ +P S PAEI+L Y +KPK  TNSL
Sbjct: 960  LYQSVAFEVPFRDAIPGSSPAEISLDYAVKPKTPTNSL 997


>gi|30696124|ref|NP_564718.2| haloacid dehalogenase-like hydrolase domain-containing protein
            [Arabidopsis thaliana]
 gi|17529226|gb|AAL38840.1| unknown protein [Arabidopsis thaliana]
 gi|332195279|gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein
            [Arabidopsis thaliana]
          Length = 1055

 Score = 1571 bits (4067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 752/996 (75%), Positives = 853/996 (85%), Gaps = 30/996 (3%)

Query: 76   WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV 135
            WGKVSAVLFDMDGVLCNSE+ SRRAAVDVF EMGVEVTV+DF+PFMGTGEA FLGGVASV
Sbjct: 71   WGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDFVPFMGTGEAKFLGGVASV 130

Query: 136  KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
            K VKGFD +AAK+RFFEIYLDKYAKP SGIGFPGALEL+ +CK+KGLKVAVASSADRIKV
Sbjct: 131  KEVKGFDPDAAKERFFEIYLDKYAKPESGIGFPGALELVTECKNKGLKVAVASSADRIKV 190

Query: 196  DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
            DANL AAGL ++MFDAIVSADAFENLKPAPDIFL+A+KIL VPTSEC+VIEDALAGVQAA
Sbjct: 191  DANLKAAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAA 250

Query: 256  KAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAA 315
            +AA MRCIAV TTLSE  LK+A PS+IR +IG++S+NDILTGG  S              
Sbjct: 251  QAANMRCIAVKTTLSEAILKDAGPSMIRDDIGNISINDILTGGSDS-------------- 296

Query: 316  SQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNW 375
            ++NSTA+L+E T          +D+  +S +G QGSRR+ILRYGSLG+A SC++FA +NW
Sbjct: 297  TRNSTAMLEENT---------VSDK--TSANGFQGSRRDILRYGSLGIALSCVYFAATNW 345

Query: 376  KAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPA 435
            KAMQYASPKA+WN L G   PSF Q +G      R+QQFV+YI+D+E+++T   VPEFP+
Sbjct: 346  KAMQYASPKALWNALVGAKSPSFTQNQG----EGRVQQFVDYIADLESKQTATTVPEFPS 401

Query: 436  KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSA 495
            KLDWLNTAPLQFRRDLKGKVV+LDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSA
Sbjct: 402  KLDWLNTAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSA 461

Query: 496  KFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGE 555
            KFDNEKDL+AIRNAVLRY ISHPVVNDGDM +WRELG+NSWPTFAVV PNGK++AQ+AGE
Sbjct: 462  KFDNEKDLDAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGE 521

Query: 556  GHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRL 615
            GHRKDLDD+V AAL +YG K +LD+TPLP  LEKDNDPRL TSPLKFPGKLAID LNNRL
Sbjct: 522  GHRKDLDDVVAAALTYYGGKNVLDSTPLPTRLEKDNDPRLATSPLKFPGKLAIDTLNNRL 581

Query: 616  FISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675
            FISDSNHNRI+VTDL+GNFIVQIGSSGEEG +DGSF+DA FNRPQGLAYNAKKNLLYVAD
Sbjct: 582  FISDSNHNRIIVTDLEGNFIVQIGSSGEEGFQDGSFEDAAFNRPQGLAYNAKKNLLYVAD 641

Query: 676  TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735
            TENHALREIDFVN+ V+TLAGNGTKGSDYQGG KGT QLLNSPWDVC++P+NEKVYIAMA
Sbjct: 642  TENHALREIDFVNERVQTLAGNGTKGSDYQGGRKGTKQLLNSPWDVCFEPVNEKVYIAMA 701

Query: 736  GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESS 795
            GQHQIWE+S +DG+TR FSG+GYERNLNGS+   TSFAQPSGISL PD  E Y+ADSESS
Sbjct: 702  GQHQIWEYSVLDGITRVFSGNGYERNLNGSTPQTTSFAQPSGISLGPDLKEAYIADSESS 761

Query: 796  SIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADS 855
            SIRAL+L+TGGSRLLAGGDP F +NLFKFGD DG+G+EVLLQHPLGV CA +GQIY+ DS
Sbjct: 762  SIRALDLQTGGSRLLAGGDPYFSENLFKFGDNDGVGAEVLLQHPLGVLCANDGQIYLTDS 821

Query: 856  YNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNII 915
            YNHKIKKLDP + RV TLAG GKAGFKDG    AQLSEPAG+   +NG LF+ADTNN++I
Sbjct: 822  YNHKIKKLDPVTKRVVTLAGTGKAGFKDGKVKGAQLSEPAGLAITENGRLFVADTNNSLI 881

Query: 916  RYLDLNK-EEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLK 974
            RY+DLNK E+ E+ TLELKGVQPPTPK++S KRLR+R+S D + + VD   S EG++ LK
Sbjct: 882  RYIDLNKGEDSEILTLELKGVQPPTPKAKSLKRLRKRASADTKIVKVDSVTSREGDLNLK 941

Query: 975  ISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISC 1034
            ISLP+ YHFSKEARSKF VDVEPENAV IDP +G LSPEGS +LHF + S S S G+ISC
Sbjct: 942  ISLPDGYHFSKEARSKFVVDVEPENAVAIDPTEGTLSPEGSTMLHFIQSSTSASVGKISC 1001

Query: 1035 KVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEITL 1070
            KVYYCKEDEVCLY+ + FEVPF+ E   S    IT 
Sbjct: 1002 KVYYCKEDEVCLYQSVQFEVPFKVESELSASPTITF 1037


>gi|297848174|ref|XP_002891968.1| hypothetical protein ARALYDRAFT_892829 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297337810|gb|EFH68227.1| hypothetical protein ARALYDRAFT_892829 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1058

 Score = 1564 bits (4049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/1021 (73%), Positives = 868/1021 (85%), Gaps = 40/1021 (3%)

Query: 66   TDVNVSSES--------KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDF 117
            + +NV++ES         WGKVSAVLFDMDGVLCNSE+ SRRAAVDVFAEMGVEVTV+DF
Sbjct: 56   SKLNVAAESPPATIATEDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFAEMGVEVTVDDF 115

Query: 118  LPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQC 177
            +PFMGTGEA FLGGVASVK VKGFD +AAKKRFFEIYLDKYAKP SGIGFPGALEL+ +C
Sbjct: 116  VPFMGTGEAKFLGGVASVKEVKGFDPDAAKKRFFEIYLDKYAKPESGIGFPGALELVTEC 175

Query: 178  KSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237
            K+KGLKVAVASSADRIKVDANL AAGL + MFDAIVSADAFENLKPAPDIFL+A+KIL V
Sbjct: 176  KNKGLKVAVASSADRIKVDANLKAAGLSLKMFDAIVSADAFENLKPAPDIFLAAAKILGV 235

Query: 238  PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297
            PTSEC+VIEDALAGVQAA+AA MRCIAV TTLSE  LK+A PS+IR +IG++S++DILTG
Sbjct: 236  PTSECVVIEDALAGVQAAQAANMRCIAVKTTLSEAILKDAGPSMIRDDIGNISISDILTG 295

Query: 298  GGGSYNEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILR 357
            G  S              ++NSTA+L+E T         A+D+  +S +G QGSRR+ILR
Sbjct: 296  GSDS--------------TRNSTAILEENT---------ASDK--TSANGFQGSRRDILR 330

Query: 358  YGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNY 417
            YGSLG+A SC++FA +NWKAMQYASPKA+WN L G   PSF Q +G      R+QQFV+Y
Sbjct: 331  YGSLGIALSCVYFAANNWKAMQYASPKALWNALVGAKSPSFTQNQG----EGRVQQFVDY 386

Query: 418  ISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
            I+D+E+++T   VPEFP+KLDWLNTAPLQFRRDLKGKVV+LDFWTYCCINCMHVLPDLEF
Sbjct: 387  ITDLESKQTATAVPEFPSKLDWLNTAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLEF 446

Query: 478  LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
            LEKKYKDMPFTVVGVHSAKFDNEKDL AIRNAVLRY ISHPVVNDGDM +WRELG+NSWP
Sbjct: 447  LEKKYKDMPFTVVGVHSAKFDNEKDLNAIRNAVLRYDISHPVVNDGDMYMWRELGINSWP 506

Query: 538  TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT 597
            TFAVV PNGK++AQ+AGEGHRKDLDDLV AAL +YG K +LD+TPLP+ LEKDNDPRL  
Sbjct: 507  TFAVVSPNGKVIAQIAGEGHRKDLDDLVAAALTYYGGKNILDSTPLPIRLEKDNDPRLAM 566

Query: 598  SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
            SPLKFPGKLAID LNNRLFISDSNHNRI+VTDL+GNFIVQIGS+GEEG +DGSF+DA FN
Sbjct: 567  SPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLEGNFIVQIGSTGEEGFQDGSFEDAAFN 626

Query: 658  RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            RPQGLAYNAKKNLLYVADTENHALREIDFVN+ VRTLAGNGTKGSDYQGG KGT QLLNS
Sbjct: 627  RPQGLAYNAKKNLLYVADTENHALREIDFVNERVRTLAGNGTKGSDYQGGRKGTKQLLNS 686

Query: 718  PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
            PWDVC++P+NEKVY+AMAGQHQIWE++ +DG+TR FSG+GYERNLNGS+   TSFAQPSG
Sbjct: 687  PWDVCFEPVNEKVYVAMAGQHQIWEYNVLDGITRVFSGNGYERNLNGSTPQTTSFAQPSG 746

Query: 778  ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
            ISL PD  E Y+ADSESSSIRAL+L+TGGSRLLAGGDP F +NLFKFGD DG+G+EVLLQ
Sbjct: 747  ISLGPDLKEAYIADSESSSIRALDLQTGGSRLLAGGDPYFSENLFKFGDNDGVGAEVLLQ 806

Query: 838  HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI 897
            HPLGV CAK+GQIY+ DSYNHKIKKLDP + RV T+AG GKAGFKDG    AQLSEPAG+
Sbjct: 807  HPLGVLCAKDGQIYLTDSYNHKIKKLDPITKRVVTVAGTGKAGFKDGKVKGAQLSEPAGL 866

Query: 898  IEAQNGNLFIADTNNNIIRYLDLNK-EEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDA 956
               +NG LF+ADTNN++IRY+DLNK E+ E+ TL+LKGVQ P PK++S KRLR+R+S D 
Sbjct: 867  AITENGRLFVADTNNSLIRYIDLNKGEDAEILTLDLKGVQLPMPKAKSVKRLRKRASADT 926

Query: 957  QTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSA 1016
            + + VD   S EG++ LKISLP+ YHFSKEARSKF VDVEPE+AV I+P++G + PEGS 
Sbjct: 927  KIVKVDSVTSREGDLNLKISLPDGYHFSKEARSKFVVDVEPESAVAINPMEGYIGPEGST 986

Query: 1017 VLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEITLPYDLKP 1076
            +LHF++ S S S G+ISCKVYYCKEDEVCLY+ + FEVPF+ E  +S  A  T+ + +KP
Sbjct: 987  MLHFKQSSTSASVGKISCKVYYCKEDEVCLYQSVQFEVPFKVESESS--ASPTITFTVKP 1044

Query: 1077 K 1077
            +
Sbjct: 1045 R 1045


>gi|12323029|gb|AAG51506.1|AC058785_9 hypothetical protein [Arabidopsis thaliana]
          Length = 1041

 Score = 1516 bits (3926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/1039 (71%), Positives = 849/1039 (81%), Gaps = 56/1039 (5%)

Query: 45   AKRTVLGRRMVVKACVTKV----EETDVNVSSES--------KWGKVSAVLFDMDGVLCN 92
            +K T  G R      ++K       T ++V++ES         WGKVSAVLFDMDGVLCN
Sbjct: 28   SKSTFTGFRSRTGVYLSKTTALQSSTKLSVAAESPAATIATDDWGKVSAVLFDMDGVLCN 87

Query: 93   SEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFE 152
            SE+ SRRAAVDVF EMGVEVTV+DF+PFMGTGEA FLGGVASVK VKGFD +AAK+RFFE
Sbjct: 88   SEDLSRRAAVDVFTEMGVEVTVDDFVPFMGTGEAKFLGGVASVKEVKGFDPDAAKERFFE 147

Query: 153  IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAI 212
            IYLDKYAKP SGIGFPGALEL+ +CK+KGLKVAVASSADRIKVDANL AAGL ++MFDAI
Sbjct: 148  IYLDKYAKPESGIGFPGALELVTECKNKGLKVAVASSADRIKVDANLKAAGLSLTMFDAI 207

Query: 213  VSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEE 272
            VSADAFENLKPAPDIFL+A+KIL VPTSEC+VIEDALAGVQAA+AA MRCIAV TTLSE 
Sbjct: 208  VSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAAQAANMRCIAVKTTLSEA 267

Query: 273  RLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAASQNSTALLKEKTDNWSI 332
             LK+A PS+IR +IG++S+NDILTGG  S              ++NSTA+L+E T     
Sbjct: 268  ILKDAGPSMIRDDIGNISINDILTGGSDS--------------TRNSTAMLEENT----- 308

Query: 333  LDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFG 392
                 +D+  +S +G QGSRR+ILRYGSLG+A SC++FA +NWKAMQYASPKA+WN L G
Sbjct: 309  ----VSDK--TSANGFQGSRRDILRYGSLGIALSCVYFAATNWKAMQYASPKALWNALVG 362

Query: 393  VNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLK 452
               PSF Q +G      R+QQFV+YI+D+E+++T   VPEFP+KLDWLNTAPLQFRRDLK
Sbjct: 363  AKSPSFTQNQG----EGRVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLK 418

Query: 453  GKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLR 512
            GKVV+LDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDL+AIRNAVLR
Sbjct: 419  GKVVILDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLDAIRNAVLR 478

Query: 513  YGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572
            Y ISHPVVNDGDM +WRELG+NSWPTFAVV PNGK++AQ+AGEGHRKDLDD+V AAL +Y
Sbjct: 479  YDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALTYY 538

Query: 573  GKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDG 632
            G K +LD+TPLP  LEKDNDPRL TSPLKFPGKLAID LNNRLFISDSNHNRI+VTDL+G
Sbjct: 539  GGKNVLDSTPLPTRLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLEG 598

Query: 633  NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692
            NFIVQIGSSGEEG +DGSF+DA FNRPQGLAYNAKKNLLYVADTENHALREIDFVN+ V+
Sbjct: 599  NFIVQIGSSGEEGFQDGSFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVQ 658

Query: 693  TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
            TLAGNGTKGSDYQGG KGT Q  +               I   GQHQIWE+S +DG+TR 
Sbjct: 659  TLAGNGTKGSDYQGGRKGTKQASD--------------LIQNIGQHQIWEYSVLDGITRV 704

Query: 753  FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG 812
            FSG+GYERNLNGS+   TSFAQPSGISL PD  E Y+ADSESSSIRAL+L+TGGSRLLAG
Sbjct: 705  FSGNGYERNLNGSTPQTTSFAQPSGISLGPDLKEAYIADSESSSIRALDLQTGGSRLLAG 764

Query: 813  GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVST 872
            GDP F +NLFKFGD DG+G+EVLLQHPLGV CA +GQIY+ DSYNHKIKKLDP + RV T
Sbjct: 765  GDPYFSENLFKFGDNDGVGAEVLLQHPLGVLCANDGQIYLTDSYNHKIKKLDPVTKRVVT 824

Query: 873  LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK-EEPELQTLE 931
            LAG GKAGFKDG    AQLSEPAG+   +NG LF+ADTNN++IRY+DLNK E+ E+ TLE
Sbjct: 825  LAGTGKAGFKDGKVKGAQLSEPAGLAITENGRLFVADTNNSLIRYIDLNKGEDSEILTLE 884

Query: 932  LKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKF 991
            LKGVQPPTPK++S KRLR+R+S D + + VD   S EG++ LKISLP+ YHFSKEARSKF
Sbjct: 885  LKGVQPPTPKAKSLKRLRKRASADTKIVKVDSVTSREGDLNLKISLPDGYHFSKEARSKF 944

Query: 992  SVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLL 1051
             VDVEPENAV IDP +G LSPEGS +LHF + S S S G+ISCKVYYCKEDEVCLY+ + 
Sbjct: 945  VVDVEPENAVAIDPTEGTLSPEGSTMLHFIQSSTSASVGKISCKVYYCKEDEVCLYQSVQ 1004

Query: 1052 FEVPFQEEVPNSPPAEITL 1070
            FEVPF+ E   S    IT 
Sbjct: 1005 FEVPFKVESELSASPTITF 1023


>gi|383100947|emb|CCD74491.1| haloacid dehalogenase-like hydrolase domain-containing protein
            [Arabidopsis halleri subsp. halleri]
          Length = 1028

 Score = 1503 bits (3891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1021 (71%), Positives = 843/1021 (82%), Gaps = 70/1021 (6%)

Query: 66   TDVNVSSES--------KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDF 117
            T +NV++ES         WGKVSAVLFDMDGVLCNSE+ SRRAAVDVF EMGVEVTV+DF
Sbjct: 56   TKLNVAAESPPATIATEDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDF 115

Query: 118  LPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQC 177
            +PFMGTGEA FLGGVASVK VKGFD +AAKKRFFEIYLDKYAKP SGIGFPGALEL+N+C
Sbjct: 116  VPFMGTGEAKFLGGVASVKEVKGFDPDAAKKRFFEIYLDKYAKPESGIGFPGALELVNEC 175

Query: 178  KSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237
            K+KGLKVAVASSADRIKVDANL AAGL ++MFDAIVSADAFENLKPAPDIFL+A+KIL V
Sbjct: 176  KNKGLKVAVASSADRIKVDANLKAAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGV 235

Query: 238  PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297
            PTSEC+VIEDALAGVQAA+AA MRCIAV TTLSE  LK+A PS+IR +IG++S++DIL+G
Sbjct: 236  PTSECVVIEDALAGVQAAQAANMRCIAVKTTLSEAILKDAGPSMIRDDIGNISISDILSG 295

Query: 298  GGGSYNEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILR 357
            G  S              ++NSTA+L+E T         A+D+  +S +G QGSRR+ILR
Sbjct: 296  GSDS--------------TRNSTAILEENT---------ASDK--TSANGFQGSRRDILR 330

Query: 358  YGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNY 417
            YGSLG+A SC++FA +NWKAMQYASPKA+WN L G   PSF Q +G      R+QQFV+Y
Sbjct: 331  YGSLGIALSCVYFAATNWKAMQYASPKALWNALVGAKSPSFTQNQG----EGRVQQFVDY 386

Query: 418  ISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
            I+D+E+++T   VPEFP+KLDWLNTAPLQFRRDLKGKVV+LDFWTYCCINCMHVLPDL F
Sbjct: 387  IADLESKQTATAVPEFPSKLDWLNTAPLQFRRDLKGKVVILDFWTYCCINCMHVLPDLAF 446

Query: 478  LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
            LEKKYKDMPFTVVGVHSAKFDNEKDL+AIRNAVLRY ISHPVVNDGDM +WRELG+NSWP
Sbjct: 447  LEKKYKDMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDISHPVVNDGDMYMWRELGINSWP 506

Query: 538  TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT 597
            TFAVV PNGK++AQ+AGEGHRKDLDDLV AAL +YG K +LD+TPLP  LEKDNDPRL T
Sbjct: 507  TFAVVSPNGKVIAQIAGEGHRKDLDDLVAAALTYYGGKNVLDSTPLPTRLEKDNDPRLAT 566

Query: 598  SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
            SPLKFPGKLAID LNNRLFISDSNHNRI+VTDL+GNFIVQIGS+GEEG +DGSF+DA FN
Sbjct: 567  SPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLEGNFIVQIGSTGEEGFQDGSFEDAAFN 626

Query: 658  RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            RPQGLAYNAKKNLLYVADTENHALR                               LLNS
Sbjct: 627  RPQGLAYNAKKNLLYVADTENHALR------------------------------YLLNS 656

Query: 718  PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
            PWDVC++P+NEKVY+AMAGQHQIWE++ +DG+TR FSG+GYERNLNGS+   TSFAQPSG
Sbjct: 657  PWDVCFEPVNEKVYVAMAGQHQIWEYNVLDGITRVFSGNGYERNLNGSTPQTTSFAQPSG 716

Query: 778  ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
            ISL PD  E Y+ADSESSSIRAL+L+TGGSRLLAGGDP F +NLFKFGD DG+G+EVLLQ
Sbjct: 717  ISLGPDLKEAYIADSESSSIRALDLQTGGSRLLAGGDPYFSENLFKFGDNDGVGAEVLLQ 776

Query: 838  HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI 897
            HPLGV CAK+GQIY+ DSYNHKIKKLDP + RV T+AG GKAGFKDG    AQLSEPAG+
Sbjct: 777  HPLGVLCAKDGQIYLTDSYNHKIKKLDPVTKRVVTVAGTGKAGFKDGKVKGAQLSEPAGL 836

Query: 898  IEAQNGNLFIADTNNNIIRYLDLNK-EEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDA 956
               +NG LF+ADTNN++IRY+DLNK E+ E+ TLELKGVQPP PK++S KRLR+R+S D 
Sbjct: 837  AITENGRLFVADTNNSLIRYIDLNKGEDAEILTLELKGVQPPMPKAKSLKRLRKRASADT 896

Query: 957  QTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSA 1016
            + + VD   S EG++ LKISLP+ YHFSKEARSKF VDVEPENAV IDP++GNLSPEGS 
Sbjct: 897  KIVKVDSVTSREGDLNLKISLPDGYHFSKEARSKFVVDVEPENAVAIDPMEGNLSPEGST 956

Query: 1017 VLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEITLPYDLKP 1076
            +LH+R+   S S G+ISCKVYYCKEDEVCLY+ + FEVPF+ E  +S  A  T+ + +KP
Sbjct: 957  MLHYRQSLTSASFGKISCKVYYCKEDEVCLYQSVQFEVPFKVESESS--ASPTITFTVKP 1014

Query: 1077 K 1077
            +
Sbjct: 1015 R 1015


>gi|218190788|gb|EEC73215.1| hypothetical protein OsI_07299 [Oryza sativa Indica Group]
          Length = 1103

 Score = 1437 bits (3721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/1044 (68%), Positives = 842/1044 (80%), Gaps = 29/1044 (2%)

Query: 51   GRRMVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV 110
            GRR V  A        +  V+  + WGKVSAVLFDMDGVLCNSEE SR A VD+FAEMGV
Sbjct: 53   GRRDVAAASAPASSSPETEVAPGA-WGKVSAVLFDMDGVLCNSEELSRLAGVDLFAEMGV 111

Query: 111  EVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGA 170
            +VT +DF+P+MGTGEANFLGGVA +KGVK F++E+AKKRFFEIYLDKYAKPN+GIGFPGA
Sbjct: 112  DVTGDDFVPYMGTGEANFLGGVAKLKGVKDFNAESAKKRFFEIYLDKYAKPNAGIGFPGA 171

Query: 171  LELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230
            L+L+ +CK+ GLKVAVASSADRIKVDANLAAAGLP+S+FDAIVSADAFENLKPAPDIFL+
Sbjct: 172  LDLVTECKNAGLKVAVASSADRIKVDANLAAAGLPLSLFDAIVSADAFENLKPAPDIFLA 231

Query: 231  ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290
            ASK L V T ECIVIEDALAGVQAAKAA+MRCIAV TTL E+ L++ASPSLIRK IG +S
Sbjct: 232  ASKTLGVDTDECIVIEDALAGVQAAKAAEMRCIAVMTTLEEDALQQASPSLIRKNIGDIS 291

Query: 291  LNDILTGGGGSYNEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQG 350
            + DIL GG  +Y      H++L+ A+   +A     T++ S +D         S  GL G
Sbjct: 292  IRDILYGGSNAY------HKILNGATNAESA---PSTNSASSID--------DSCEGLVG 334

Query: 351  SRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSER 410
            SRR ILRYGSLG+A SCL +   NWKAMQ+ SPK + N   G N   F   EG    + R
Sbjct: 335  SRRNILRYGSLGIAVSCLIYTTRNWKAMQFVSPKGLLNYFTGGNSSIFASNEG-EQLTSR 393

Query: 411  IQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMH 470
            +QQ   Y++D E   +   VPEFP KLDWLNTAPLQF RDLKG+VV+LDFWTYCCINCMH
Sbjct: 394  VQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFWTYCCINCMH 453

Query: 471  VLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530
            VLPDLEF+EKKYKD PFTVVGVHSAKFDNEKDLEAIRNAVLRY I+HPVVNDGDM LWRE
Sbjct: 454  VLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRE 513

Query: 531  LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKD 590
            LGVNSWPTF V+GPNGK+LAQ++GEGHRKDLDD+V AAL FY + KLL N+ LPL+LEKD
Sbjct: 514  LGVNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLLQNSSLPLALEKD 573

Query: 591  NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
             D RL  SPLKFPGKLAID+LNNRLFISDSNHNRIVVT+L+G FI QIGSS EEGL DG+
Sbjct: 574  KDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSS-EEGLLDGT 632

Query: 651  FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
            FD A+FNRPQGLAYN+KKN+LYVADTENHALREI+FV++TV+TLAGNGTKGSDY+GG +G
Sbjct: 633  FDTASFNRPQGLAYNSKKNILYVADTENHALREINFVSETVKTLAGNGTKGSDYRGGGQG 692

Query: 711  TSQ-----LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS 765
            T+Q     +LNSPWDVCY P  E +YIAMAGQHQIW+H+T+DGVT   SGDGYERNLNGS
Sbjct: 693  TNQACFFMVLNSPWDVCYDPSKETLYIAMAGQHQIWKHNTLDGVTEVLSGDGYERNLNGS 752

Query: 766  SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFG 825
            SS  TSFAQPSGISL+P+  E+ VADSESSSIR +NLK+GGSR LAGGDP+ P+NLF+FG
Sbjct: 753  SSTRTSFAQPSGISLAPELQELIVADSESSSIRVVNLKSGGSRSLAGGDPMIPENLFRFG 812

Query: 826  DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            D DG GS+VLLQHPLGV  A + QIYVADSYNHKIK+LDP + +V+T+AG G+AG+KDG 
Sbjct: 813  DHDGTGSDVLLQHPLGVVYASDNQIYVADSYNHKIKRLDPVTRKVTTIAGTGRAGYKDGP 872

Query: 886  ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
            AL+AQLSEPAG++E  +G L +ADTNN+ IRY+ LN++  E++TL+L GVQPP+PK ++ 
Sbjct: 873  ALSAQLSEPAGLVEVGDGRLLVADTNNSTIRYIVLNEKGAEVRTLDLIGVQPPSPKPKTL 932

Query: 946  KRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDP 1005
            KRLRR  S D   I +DGG S EG + L IS+P+ YHFSKEARSKF VD+EP +A+ I+P
Sbjct: 933  KRLRRHLSADTDVINIDGGSSIEGYLSLAISVPDGYHFSKEARSKFDVDIEPADAIEIEP 992

Query: 1006 LDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEE-VPNSP 1064
            ++G L+  G A L +RR S S STGRI+CKVYYCKEDEVCLY+ + F+V F+EE VP+  
Sbjct: 993  VNGFLN-SGQASLKYRRKSSSSSTGRINCKVYYCKEDEVCLYQSVAFDVKFREEAVPS-- 1049

Query: 1065 PAEITLPYDLKPKILTNSLQLPVA 1088
            PA+ITL Y + P+  ++S QL  A
Sbjct: 1050 PAQITLSYSVVPRDTSSSAQLIAA 1073


>gi|222624800|gb|EEE58932.1| hypothetical protein OsJ_10596 [Oryza sativa Japonica Group]
          Length = 1017

 Score = 1417 bits (3667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1009 (69%), Positives = 824/1009 (81%), Gaps = 28/1009 (2%)

Query: 86   MDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEA 145
            MDGVLCNSEE SR A VD+FAEMGV+VT +DF+P+MGTGEANFLGGVA +KGVK F++E+
Sbjct: 1    MDGVLCNSEELSRLAGVDLFAEMGVDVTGDDFVPYMGTGEANFLGGVAKLKGVKDFNAES 60

Query: 146  AKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLP 205
            AKKRFFEIYLDKYAKPN+GIGFPGAL+L+ +CK+ GLKVAVASSADRIKVDANLAAAGLP
Sbjct: 61   AKKRFFEIYLDKYAKPNAGIGFPGALDLVTECKNAGLKVAVASSADRIKVDANLAAAGLP 120

Query: 206  VSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAV 265
            +S+FDAIVSADAFENLKPAPDIFL+ASK L V T ECIVIEDALAGVQAAKAA+MRCIAV
Sbjct: 121  LSLFDAIVSADAFENLKPAPDIFLAASKTLGVDTDECIVIEDALAGVQAAKAAEMRCIAV 180

Query: 266  TTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAASQNSTALLKE 325
             TTL E+ L++ASPSLIRK IG +S+ DIL GG  +Y      H++L+ A+   +A    
Sbjct: 181  MTTLEEDALQQASPSLIRKNIGDISIRDILYGGSNAY------HKILNGATNAESA---P 231

Query: 326  KTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKA 385
             T++ S +D         S  GL GSRR ILRYGSLG+A SCL +   NWKAMQ+ SPK 
Sbjct: 232  STNSASSID--------DSREGLVGSRRNILRYGSLGIAVSCLIYTTRNWKAMQFVSPKG 283

Query: 386  IWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPL 445
            + N   G N   F   EG    + R+QQ   Y++D E   +   VPEFP KLDWLNTAPL
Sbjct: 284  LLNYFTGGNSSIFASNEG-EQLTSRVQQIKKYLADFETGGSATCVPEFPRKLDWLNTAPL 342

Query: 446  QFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEA 505
            QF RDLKG+VV+LDFWTYCCINCMHVLPDLEF+EKKYKD PFTVVGVHSAKFDNEKDLEA
Sbjct: 343  QFGRDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEA 402

Query: 506  IRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLV 565
            IRNAVLRY I+HPVVNDGDM LWRELGVNSWPTF V+GPNGK+LAQ++GEGHRKDLDD+V
Sbjct: 403  IRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVV 462

Query: 566  EAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRI 625
             AAL FY + KLL N+ LPL+LEKD D RL  SPLKFPGKLAID+LNNRLFISDSNHNRI
Sbjct: 463  GAALEFYEENKLLQNSSLPLALEKDKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNRI 522

Query: 626  VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
            VVT+L+G FI QIGSS EEGL DG+FD A+FNRPQGLAYN+KKN+LYVADTENHALREI+
Sbjct: 523  VVTNLEGEFICQIGSS-EEGLLDGTFDTASFNRPQGLAYNSKKNILYVADTENHALREIN 581

Query: 686  FVNDTVRTLAGNGTKGSDYQGGEKGTSQ-----LLNSPWDVCYKPINEKVYIAMAGQHQI 740
            FV++TV+TLAGNGTKGSDY+GG +GT+Q     +LNSPWDVCY P  E +YIAMAGQHQI
Sbjct: 582  FVSETVKTLAGNGTKGSDYRGGGQGTNQACFFMVLNSPWDVCYDPSKETLYIAMAGQHQI 641

Query: 741  WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL 800
            W+H+T+DGVT   SGDGYERNLNGSSS  TSFAQPSGISL+P+  E+ VADSESSSIR +
Sbjct: 642  WKHNTLDGVTEVLSGDGYERNLNGSSSTRTSFAQPSGISLAPELQELIVADSESSSIRVV 701

Query: 801  NLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKI 860
            NLK+GGSR LAGGDP+ P+NLF+FGD DG GS+VLLQHPLGV  A + QIYVADSYNHKI
Sbjct: 702  NLKSGGSRSLAGGDPMIPENLFRFGDHDGTGSDVLLQHPLGVVYASDNQIYVADSYNHKI 761

Query: 861  KKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
            K+LDP + +V+T+AG G+AG+KDG AL+AQLSEPAG++E  +G L +ADTNN+ IRY+ L
Sbjct: 762  KRLDPVTRKVTTIAGTGRAGYKDGPALSAQLSEPAGLVEVGDGRLLVADTNNSTIRYIVL 821

Query: 921  NKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEE 980
            N++  E++TL+L GVQPP+PK ++ KRLRRR S D   I +DGG S EG + L IS+P+ 
Sbjct: 822  NEKGAEVRTLDLIGVQPPSPKPKTLKRLRRRLSADTDVINIDGGSSIEGYLSLAISVPDG 881

Query: 981  YHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCK 1040
            YHFSKEARSKF VD+EP +A+ I+P++G L+  G A L +RR S S STGRI+CKVYYCK
Sbjct: 882  YHFSKEARSKFDVDIEPADAIEIEPVNGFLN-SGQASLKYRRKSSSSSTGRINCKVYYCK 940

Query: 1041 EDEVCLYKPLLFEVPFQEE-VPNSPPAEITLPYDLKPKILTNSLQLPVA 1088
            EDEVCLY+ + F+V F+EE VP+  PA+ITL Y + P+  ++S QL  A
Sbjct: 941  EDEVCLYQSVAFDVKFREEAVPS--PAQITLSYSVVPRDTSSSAQLIAA 987


>gi|449524308|ref|XP_004169165.1| PREDICTED: NHL repeat-containing protein 2-like, partial [Cucumis
           sativus]
          Length = 892

 Score = 1388 bits (3593), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/900 (74%), Positives = 773/900 (85%), Gaps = 19/900 (2%)

Query: 2   IAMKLLS-SPPASSLSLQTKLFFFSPNTKQLRPSSVSSALFQCGAKRTVLGRRMVVKACV 60
           + +K LS SPP        +L FFS   K  +P+SV   L Q  ++R V+ R+M VKACV
Sbjct: 1   MTLKYLSPSPP---FLTSARLCFFSSKLKGTKPTSVPYYLLQWRSQRLVVPRKMAVKACV 57

Query: 61  TKVEETDVNVSS-ESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLP 119
            KVEE+    S+ +S+WGKVSAVLFDMDGVLCNSE+ SRRAAVDVF E+GVEVT E+F+P
Sbjct: 58  -KVEESSPKESAYKSEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFRELGVEVTPEEFVP 116

Query: 120 FMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKS 179
           FMGTGEANFLGGVASVKGV GF  EAAKKRFFEIYL+KYAKPNSGIGFPGALELI +CKS
Sbjct: 117 FMGTGEANFLGGVASVKGVAGFSPEAAKKRFFEIYLEKYAKPNSGIGFPGALELITECKS 176

Query: 180 KGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPT 239
           KGLKVAVASSADRIKVDANLAAAGLP+SMFDAIVSADAFENLKPAPDIF++ASK+LNVP+
Sbjct: 177 KGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFIAASKLLNVPS 236

Query: 240 SECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGG 299
            ECIVIEDALAGVQAA+AA+MRCIAV TTLS+E LK A PSLIR +IG+++++DIL+GG 
Sbjct: 237 DECIVIEDALAGVQAAQAAKMRCIAVKTTLSDETLKTAGPSLIRNDIGNITIHDILSGGS 296

Query: 300 GSY---------NEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQG 350
            +Y         NEKIQE + L  + Q S        D  ++ D  AA++  S    L G
Sbjct: 297 DAYSIIPFSLIRNEKIQEPQFLQTSEQLSQQKYTAGIDAAAVQDLDAANDGSSPIGRLLG 356

Query: 351 SRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSER 410
           +RR+I+RYGSLG+AFSCL F + NWKAMQYASPKAIWN+LFGVN+PSF+     +  S R
Sbjct: 357 TRRDIVRYGSLGIAFSCLIFTIRNWKAMQYASPKAIWNLLFGVNQPSFQN----NVNSGR 412

Query: 411 IQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMH 470
           IQ+F+ YIS++E R T P+VPEFP+KLDWLNT+PLQF +DLKGKVV+LDFWTYCCINCMH
Sbjct: 413 IQRFMEYISEIETRGTAPVVPEFPSKLDWLNTSPLQFSKDLKGKVVLLDFWTYCCINCMH 472

Query: 471 VLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530
           VLPDLE+LEKKY D  F VVGVHSAKFDNEKDLEAIRNAVLRYGI+HPVVNDGDM LWRE
Sbjct: 473 VLPDLEYLEKKYNDKAFAVVGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMFLWRE 532

Query: 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKD 590
           LG+NSWPTFA+V PNGKLLAQ++GEG RKDLDD VEAALLFYG+KK+LD+ PLPL LEKD
Sbjct: 533 LGINSWPTFAIVSPNGKLLAQISGEGRRKDLDDFVEAALLFYGEKKILDSRPLPLRLEKD 592

Query: 591 NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
           NDPRL  SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDL GNF++QIGS+GE+GLRDG+
Sbjct: 593 NDPRLIASPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLSGNFLLQIGSTGEDGLRDGN 652

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
           FDDATFNRPQGLAYNAKKNLLYVADTENHALRE+DFV + VRTLAG+G+KGSDYQGG++G
Sbjct: 653 FDDATFNRPQGLAYNAKKNLLYVADTENHALREVDFVKERVRTLAGDGSKGSDYQGGKEG 712

Query: 711 TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
           TSQLLNSPWDVC++PINEKVYIAMAGQHQIW H T++GVT++FSGDG+ERNLNGSS+ +T
Sbjct: 713 TSQLLNSPWDVCFEPINEKVYIAMAGQHQIWVHDTLNGVTKSFSGDGFERNLNGSSATST 772

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
           SFAQPSG+SLSPD  E+Y+ADSESSSIRA++LKTG SRLLAGGDPIF DNLFKFGD DG+
Sbjct: 773 SFAQPSGLSLSPDLSEVYIADSESSSIRAVDLKTGASRLLAGGDPIFSDNLFKFGDHDGV 832

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
           GSEVLLQHPLGV+C+K+GQIYVADSYNHK+K LDP S +V+T+AG GKAGFKDG AL AQ
Sbjct: 833 GSEVLLQHPLGVFCSKDGQIYVADSYNHKVKMLDPVSKKVTTIAGTGKAGFKDGTALEAQ 892



 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNL 905
           N +++++DS +++I   D + N +  +   G+ G +DG    A  + P G+   A+   L
Sbjct: 614 NNRLFISDSNHNRIVVTDLSGNFLLQIGSTGEDGLRDGNFDDATFNRPQGLAYNAKKNLL 673

Query: 906 FIADTNNNIIRYLDLNKEE 924
           ++ADT N+ +R +D  KE 
Sbjct: 674 YVADTENHALREVDFVKER 692


>gi|168024767|ref|XP_001764907.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683943|gb|EDQ70349.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1040

 Score = 1239 bits (3205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1034 (59%), Positives = 771/1034 (74%), Gaps = 44/1034 (4%)

Query: 54   MVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVT 113
            +VV+A V++ E   V+++ + + G V  VLFDMDGVLC+SE  SR+AAV++FAEMG  VT
Sbjct: 28   VVVRAAVSE-EGQGVSIA-DKEAGVVRGVLFDMDGVLCDSEHCSRKAAVELFAEMGYNVT 85

Query: 114  VEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALEL 173
             EDF+PFMGTGEANFLGGVA   GVK FD+ +AK+RFF+IY++K+A PNSG+G+PGAL+L
Sbjct: 86   EEDFIPFMGTGEANFLGGVAKKYGVKDFDTVSAKRRFFQIYIEKFAPPNSGLGYPGALDL 145

Query: 174  INQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASK 233
            I QCK  GLK+AVASSADR+KVDANLAAAG P S FDAIVSAD FENLKPAPDIF++A+K
Sbjct: 146  ILQCKEAGLKLAVASSADRVKVDANLAAAGFPQSNFDAIVSADLFENLKPAPDIFIAAAK 205

Query: 234  ILNVPTSECIVIEDALAGVQAAKAAQM-RCIAVTTTLSEERLKEASPSLIRKEIGSVSLN 292
             L +PT EC+VIEDA AG+QAA+AA M RCI+VTTTLSEE+L EA P L+RK+I  ++L 
Sbjct: 206  SLGLPTHECVVIEDAYAGIQAARAAGMSRCISVTTTLSEEKLMEAGPQLVRKDISRITLK 265

Query: 293  DILTGGGGSYNEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSR 352
            DI            QE   +      S A           +                 +R
Sbjct: 266  DI------------QELGFIFLKLHCSIAYFASNLTQIGYI------------CRFSTTR 301

Query: 353  REILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQ 412
            RE+L+ GSL +     +F+ ++ KA+ YASPKA+ N L GV +P        ++ SER++
Sbjct: 302  REVLKLGSLAIGLGSAYFSATHLKALSYASPKALLNALQGVGQPLL------ANGSERVR 355

Query: 413  QFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVL 472
            QF  YI+D+E++    +VPEF  KL+WLNTAPL  ++DLKGKVVVLDFWTYCCINCMH+L
Sbjct: 356  QFKQYITDIESKYAGQVVPEFQPKLEWLNTAPLSLKKDLKGKVVVLDFWTYCCINCMHIL 415

Query: 473  PDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELG 532
            PDL FLEKKYKD P TV+GVHSAKFDNEKD  AIRNAVLRY ++HPVVNDG+M +WR+LG
Sbjct: 416  PDLAFLEKKYKDQPMTVIGVHSAKFDNEKDSAAIRNAVLRYDVTHPVVNDGEMTMWRQLG 475

Query: 533  VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDND 592
            V+SWPT AVV P G+L+A L+GEGHR+DLDDL+EA+L FYG+K LLD  PL  SLE+D D
Sbjct: 476  VSSWPTLAVVSPKGRLIAMLSGEGHREDLDDLLEASLEFYGEKNLLDAKPLIPSLERDKD 535

Query: 593  PRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
             RL  SPLKFPGKL  D++N RLFISDSNH+RIVVTDLDGNFIV +   G EGL+DGSF+
Sbjct: 536  SRLVASPLKFPGKLTTDLVNGRLFISDSNHHRIVVTDLDGNFIVNV-GGGGEGLKDGSFE 594

Query: 653  DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
             + FNRPQG+AYNA KN+LYVADTENHALREID   +TVRTLAGNG KGSDY+GG+KG++
Sbjct: 595  TSLFNRPQGVAYNAFKNVLYVADTENHALREIDLAKETVRTLAGNGIKGSDYRGGKKGSA 654

Query: 713  QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772
            Q+LNSPWDV +      VYIAMAGQHQIW ++  DG    FSGDGYERN NG    +TS+
Sbjct: 655  QVLNSPWDVAHDAEGGFVYIAMAGQHQIWRYNIADGRAEVFSGDGYERNQNGKRGKDTSY 714

Query: 773  AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
            AQPSGIS +PDF  +Y+ADSESSSIR +++ TGGS+LLAGGDP F DNLF+FGDRDG+GS
Sbjct: 715  AQPSGISFTPDFKYMYLADSESSSIRRVDMTTGGSKLLAGGDPTFSDNLFQFGDRDGVGS 774

Query: 833  EVLLQHPLGVYCAKNGQIYVADSYNHK------IKKLDPASNRVSTLAGIGKAGFKDGAA 886
               LQHPLGV  +  G +YVADSYNHK      IK L+P++ +V+TLAG G AGFKDG A
Sbjct: 775  NAQLQHPLGVLYSSEGLVYVADSYNHKAISCLQIKVLNPSTQKVTTLAGTGTAGFKDGTA 834

Query: 887  LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE-EPELQTLELKGVQPPTPKSRS- 944
               QLSEPAGI    +G L++ADTNN++IR LDL  +  P+++TLELKGVQPP+  + + 
Sbjct: 835  QEGQLSEPAGIALGPDGKLYVADTNNSLIRVLDLQAQGGPKIETLELKGVQPPSVAAPTG 894

Query: 945  PKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIID 1004
            P+RLR+R S D Q I +D   S  G++ L+ISL   YHFS EA+SK+ V++E ++ V +D
Sbjct: 895  PRRLRQRLSSDTQVIRIDPITSLNGDLQLQISLAPGYHFSNEAQSKYEVELEMDSGVTLD 954

Query: 1005 PLDGNLSPEGSAVLHFRR--MSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPN 1062
            P  G + P+G+A++HF+R   S S  T R+SCKVY+CKED+VCLYK L+F+VPF  EV N
Sbjct: 955  PATGTIGPDGNAIIHFKRDLNSASKFTTRVSCKVYFCKEDQVCLYKALVFDVPFSSEVVN 1014

Query: 1063 SPPAEITLPYDLKP 1076
                ++TL   +KP
Sbjct: 1015 DASQKVTLSALVKP 1028


>gi|108707786|gb|ABF95581.1| HAD-superfamily hydrolase, subfamily IA, variant 3 containing
            protein, expressed [Oryza sativa Japonica Group]
          Length = 1064

 Score = 1205 bits (3118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/1058 (60%), Positives = 771/1058 (72%), Gaps = 72/1058 (6%)

Query: 51   GRRMVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV 110
            GRR V  A        +  V+  + WGKVSAVLFDMDGVLCNSEE SR A VD+FAEMGV
Sbjct: 53   GRRDVAAASAPASSSPETEVAPGA-WGKVSAVLFDMDGVLCNSEELSRLAGVDLFAEMGV 111

Query: 111  EVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGA 170
            +VT +DF+P+MGTGEANFLGGVA +KGVK F++E+AKKRFFEIYLDKYAKPN+GIGFPGA
Sbjct: 112  DVTGDDFVPYMGTGEANFLGGVAKLKGVKDFNAESAKKRFFEIYLDKYAKPNAGIGFPGA 171

Query: 171  LELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230
            L+L+ +CK+ GLKVAVASSADRIKVDANLAAAGLP+S+FDAIVSADAFENLKPAPDIFL+
Sbjct: 172  LDLVTECKNAGLKVAVASSADRIKVDANLAAAGLPLSLFDAIVSADAFENLKPAPDIFLA 231

Query: 231  ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290
            ASK L V T ECIVIEDALAGVQAAKAA+MRCIAV TTL E+ L++ASPSLIRK IG +S
Sbjct: 232  ASKTLGVDTDECIVIEDALAGVQAAKAAEMRCIAVMTTLEEDALQQASPSLIRKNIGDIS 291

Query: 291  LNDILTGGGGSYNEKIQEHELLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQG 350
            + DIL GG  +Y      H++L+ A+   +A             T +A     S  GL G
Sbjct: 292  IRDILYGGSNAY------HKILNGATNAESAP-----------STNSASSIDDSREGLVG 334

Query: 351  SRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLF-GVNRPSFEQTEGGSSQSE 409
            SRR ILRYGSLG+A SCL +   NWK + + +    +N  F  V+  S   +   SS SE
Sbjct: 335  SRRNILRYGSLGIAVSCLIYTTRNWKLVIFLN---TYNYHFYTVHGMSLAASITQSSLSE 391

Query: 410  RIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCM 469
            ++     Y+      K   I+              L   +DLKG+VV+LDFWTYCCINCM
Sbjct: 392  QLTPCSLYLP-----KGCLIISRVEI------VRYLLVMKDLKGRVVLLDFWTYCCINCM 440

Query: 470  HVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529
            HVLPDLEF+EKKYKD PFTVVGVHSAKFDNEKDLEAIRNAVLRY I+HPVVNDGDM LWR
Sbjct: 441  HVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWR 500

Query: 530  ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEK 589
            ELGVNSWPTF V+GPNGK+LAQ++GEGHRKDLDD+V AAL FY + KLL N+ LPL+LEK
Sbjct: 501  ELGVNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLLQNSSLPLALEK 560

Query: 590  DNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDG 649
            D D RL  SPLKFPGKLAID+LNNRLFISDSNHNRIVVT+L+G FI QIGSS EEGL DG
Sbjct: 561  DKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSS-EEGLLDG 619

Query: 650  SFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDF----------VNDT-VRTLAGNG 698
            +FD A+FNRPQGLAYN+KKN+LYVADTENHALR + +          ++D  + T+A   
Sbjct: 620  TFDTASFNRPQGLAYNSKKNILYVADTENHALRTLTWFIVLSLHVILISDCHMFTIAYYT 679

Query: 699  TKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758
               S  Q    G  ++LNSPWDVCY P  E +YIAMAGQHQIW+H+T+DGVT   SGDGY
Sbjct: 680  VSTS--QNINIGKLKVLNSPWDVCYDPSKETLYIAMAGQHQIWKHNTLDGVTEVLSGDGY 737

Query: 759  ERNLNGSS---SLNTSFAQPS----GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLA 811
            ERNLNGSS    +N      S    GI+L   F      +  + S+  L    G +  L 
Sbjct: 738  ERNLNGSSYPLCINEHVVYVSFYSHGIALESHFY----CECWNCSLYPLLCYLGPTWFLQ 793

Query: 812  GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS 871
                      + FGD DG GS+VLLQHPLGV  A + QIYVADSYNHKIK+LDP + +V+
Sbjct: 794  ----------YLFGDHDGTGSDVLLQHPLGVVYASDNQIYVADSYNHKIKRLDPVTRKVT 843

Query: 872  TLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931
            T+AG G+AG+KDG AL+AQLSEPAG++E  +G L +ADTNN+ IRY+ LN++  E++TL+
Sbjct: 844  TIAGTGRAGYKDGPALSAQLSEPAGLVEVGDGRLLVADTNNSTIRYIVLNEKGAEVRTLD 903

Query: 932  LKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKF 991
            L GVQPP+PK ++ KRLRRR S D   I +DGG S EG + L IS+P+ YHFSKEARSKF
Sbjct: 904  LIGVQPPSPKPKTLKRLRRRLSADTDVINIDGGSSIEGYLSLAISVPDGYHFSKEARSKF 963

Query: 992  SVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLL 1051
             VD+EP +A+ I+P++G L+  G A L +RR S S STGRI+CKVYYCKEDEVCLY+ + 
Sbjct: 964  DVDIEPADAIEIEPVNGFLN-SGQASLKYRRKSSSSSTGRINCKVYYCKEDEVCLYQSVA 1022

Query: 1052 FEVPFQEE-VPNSPPAEITLPYDLKPKILTNSLQLPVA 1088
            F+V F+EE VP+  PA+ITL Y + P+  ++S QL  A
Sbjct: 1023 FDVKFREEAVPS--PAQITLSYSVVPRDTSSSAQLIAA 1058


>gi|302760605|ref|XP_002963725.1| hypothetical protein SELMODRAFT_79954 [Selaginella moellendorffii]
 gi|300168993|gb|EFJ35596.1| hypothetical protein SELMODRAFT_79954 [Selaginella moellendorffii]
          Length = 1052

 Score = 1187 bits (3070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1025 (59%), Positives = 756/1025 (73%), Gaps = 46/1025 (4%)

Query: 58   ACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDF 117
            +C   VE++      + +   V  VLFDMDGVLC+SEE SR AAVDVFA MGV V  EDF
Sbjct: 55   SCARAVEKSRQGAVLQEEAPPVRGVLFDMDGVLCDSEERSRDAAVDVFAGMGVTVRPEDF 114

Query: 118  LPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQC 177
            +PFMGTGEANFLGGVA +  V GFD   AK++FFE+Y+ KYAKP+SG+G+PGALELI +C
Sbjct: 115  IPFMGTGEANFLGGVAGLYQVPGFDPIQAKEKFFEVYIQKYAKPDSGLGYPGALELIMEC 174

Query: 178  KSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237
            K  GLKVAVASSADRIKVDANL+AAGLP + FDAIVSAD FE LKPAPDIFL+A+K L +
Sbjct: 175  KRAGLKVAVASSADRIKVDANLSAAGLPQTNFDAIVSADVFERLKPAPDIFLAAAKALGL 234

Query: 238  PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297
            P SEC+V+EDALAGVQAA+AA MRCIAV+TTLSEE L +A+P+L R  I +++L+DIL  
Sbjct: 235  PPSECVVVEDALAGVQAARAAGMRCIAVSTTLSEESLAKANPTLTRMNIANITLSDILN- 293

Query: 298  GGGSYNEKIQEHELLHAASQNSTALLKEKTDNW--SILDTGAADEKGSSTSGLQGSRREI 355
                         L   A+   T +      +W  SILDT  +   G +       RR+I
Sbjct: 294  -------------LQDKAAPGVTGM------DWIYSILDTEVSLPFGIT-------RRDI 327

Query: 356  LRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFV 415
            +R GS  +  SCL FA + WKAM Y SP A+ N   G +        G        Q ++
Sbjct: 328  IRLGSFSLGTSCLAFAATRWKAMTYGSPMALLNAFLGADDIPLAIGSGKGC----CQFYL 383

Query: 416  NYISDVENRKTT--PIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVL 472
            +YIS++E +K T    V EFP  L WLNTA PL+F+  L GKVV+LDFWTYCCINCMHVL
Sbjct: 384  SYISNLEAKKVTGGQKVMEFPPGLQWLNTAAPLRFKGALHGKVVILDFWTYCCINCMHVL 443

Query: 473  PDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELG 532
            PDL +LE+KYKD P TVVGVHSAKFDNEKD EAIRNAVLRY ++HPVVNDGDMNLWR+LG
Sbjct: 444  PDLAYLEQKYKDQPLTVVGVHSAKFDNEKDTEAIRNAVLRYNVTHPVVNDGDMNLWRKLG 503

Query: 533  VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDND 592
            V+SWPTF VV PNGK++A+LAGEGHRKDLD+LV+AAL +YG+KKLL+  P+PL LEK   
Sbjct: 504  VSSWPTFVVVSPNGKVIARLAGEGHRKDLDNLVDAALQYYGEKKLLNAQPIPLQLEKSKS 563

Query: 593  PRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
             R+ T+PL FPGKLA D+ N RLFISDSNHNRIVVTDL+GN+I+Q+G SG EGL DGSF 
Sbjct: 564  ARILTTPLSFPGKLATDLANGRLFISDSNHNRIVVTDLNGNYILQVG-SGSEGLTDGSFS 622

Query: 653  DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
             A+FNRPQG+AY+ +KN+LYVADTENHALRE+DFV +TVRTLAG G +G DY+GG+ G S
Sbjct: 623  LASFNRPQGVAYDTEKNILYVADTENHALREVDFVKETVRTLAGTGERGFDYRGGKAGQS 682

Query: 713  QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772
            Q LNSPWD+C  P +  +YIAMAG+HQIWE +  +GV + FSGDGYERNLNGS   N+S+
Sbjct: 683  QPLNSPWDLCLHP-DGMLYIAMAGEHQIWEFNRSNGVAKVFSGDGYERNLNGSKGSNSSY 741

Query: 773  AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
            AQPSG+SLSPD   +Y+ADSESSS+R++NLKTGGS+ L+GGDP FP+NLF+FGD+DG  S
Sbjct: 742  AQPSGLSLSPDMDHLYIADSESSSVRSVNLKTGGSQWLSGGDPTFPENLFQFGDKDGPAS 801

Query: 833  EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
            + L QHPLG+  + NG IYVADSYNHKIK +D AS  V T+AG G AG++DG ++ AQ S
Sbjct: 802  QALFQHPLGILSSANGAIYVADSYNHKIKLMDLASKTVRTVAGTGVAGYEDGKSVKAQFS 861

Query: 893  EPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQ--TLELKGVQPPTPKSRSPKRLRR 950
            EPAG+    NG+LF+ADTNNN+IR L    ++  +Q  TLELKGV+PP P  +SP+RLRR
Sbjct: 862  EPAGLALGPNGSLFVADTNNNLIRLLKPGADDNAIQVTTLELKGVEPPRPLEKSPRRLRR 921

Query: 951  RSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNL 1010
            R S D + + +       G++ L+I LP EYHFSKEA SK+ VDVEP+++V + P  G  
Sbjct: 922  RPSSDMEVVRLQAVPGLRGDLQLQIDLPPEYHFSKEATSKYEVDVEPDDSVDVKPDKGTF 981

Query: 1011 SPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQE-----EVPNSPP 1065
              +G A L F R  P+ S  RI  KVYYC+E++VCLYK ++ EVP +E     E  +S P
Sbjct: 982  Q-DGRASLSFERSKPTSSLLRIISKVYYCEEEKVCLYKGIVVEVPLEESNGGTENSSSIP 1040

Query: 1066 AEITL 1070
             ++T+
Sbjct: 1041 VKLTV 1045


>gi|302786076|ref|XP_002974809.1| hypothetical protein SELMODRAFT_101985 [Selaginella moellendorffii]
 gi|300157704|gb|EFJ24329.1| hypothetical protein SELMODRAFT_101985 [Selaginella moellendorffii]
          Length = 1049

 Score = 1181 bits (3056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1004 (60%), Positives = 748/1004 (74%), Gaps = 46/1004 (4%)

Query: 79   VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
            V  VLFDMDGVLC+SEE SR AAVDVFA MGV V  EDF+PFMGTGEANFLGGVA +  V
Sbjct: 73   VRGVLFDMDGVLCDSEERSRDAAVDVFAGMGVTVRPEDFIPFMGTGEANFLGGVAGLYQV 132

Query: 139  KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
             GFD   AK++FFE+Y+ KYAKP+SG+G+PGALELI +CK  GLKVAVASSADRIKVDAN
Sbjct: 133  PGFDPIQAKEKFFEVYIQKYAKPDSGLGYPGALELIMECKRAGLKVAVASSADRIKVDAN 192

Query: 199  LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
            L+AAGLP + FDAIVSAD FE LKPAPDIFL+A+K L +P SEC+V+EDALAGVQAA+AA
Sbjct: 193  LSAAGLPQTNFDAIVSADVFERLKPAPDIFLAAAKALGLPPSECVVVEDALAGVQAARAA 252

Query: 259  QMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAASQN 318
             MRCIAV+TTLSEE L +A+P+L R  I +++L+DIL               L   A+  
Sbjct: 253  GMRCIAVSTTLSEESLAKANPTLTRMNIANITLSDILN--------------LQDKAAPG 298

Query: 319  STALLKEKTDNW--SILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNWK 376
             T +      +W  SILDT  +   G +       RR+I+R GS  +  SCL FA + WK
Sbjct: 299  VTGM------DWIYSILDTEVSLPFGIT-------RRDIIRLGSFSLGTSCLAFAATRWK 345

Query: 377  AMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTT--PIVPEFP 434
            AM Y SP A+ N   G +        G        Q +++YIS++E +K T    V EFP
Sbjct: 346  AMTYGSPMALLNAFLGADDIPLAIGSGKGC----CQFYLSYISNLEAKKVTGGQKVMEFP 401

Query: 435  AKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVH 493
              L WLNTA PL+F+  L GKVV+LDFWTYCCINCMHVLPDL +LE+KYKD P TVVGVH
Sbjct: 402  PGLQWLNTAAPLRFKGALHGKVVILDFWTYCCINCMHVLPDLAYLEQKYKDQPLTVVGVH 461

Query: 494  SAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLA 553
            SAKFDNEKD EAIRNAVLRY ++HPVVNDGDMNLWR+LGV+SWPTF VV PNGK++A+LA
Sbjct: 462  SAKFDNEKDTEAIRNAVLRYNVTHPVVNDGDMNLWRQLGVSSWPTFVVVSPNGKVIARLA 521

Query: 554  GEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNN 613
            GEGHRKDLD+LV+AAL +YG+KKLL+  P+PL LEK    R+ T+PL FPGKLA D+ N+
Sbjct: 522  GEGHRKDLDNLVDAALQYYGEKKLLNAQPIPLQLEKSKSARILTTPLSFPGKLATDLANS 581

Query: 614  RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673
            RLFISDSNHNRIVVTDL+GN+I+Q+G SG EGL DGSF  A+FNRPQG+AY+ +KN+LYV
Sbjct: 582  RLFISDSNHNRIVVTDLNGNYILQVG-SGAEGLTDGSFSLASFNRPQGVAYDTEKNILYV 640

Query: 674  ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIA 733
            ADTENHALRE+DFV +TVRTLAG G +G DY+GG+ G SQ LNSPWD+C  P +  +YIA
Sbjct: 641  ADTENHALREVDFVKETVRTLAGTGERGFDYRGGKAGQSQPLNSPWDLCLHP-DGMLYIA 699

Query: 734  MAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793
            MAG+HQIWE +  +GV + FSGDGYERNLNGS   N+S+AQPSG+SLSPD   +Y+ADSE
Sbjct: 700  MAGEHQIWEFNRSNGVAKVFSGDGYERNLNGSKGSNSSYAQPSGLSLSPDMDHLYIADSE 759

Query: 794  SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVA 853
            SSS+R++NLKTGGS+ L+GGDP FP+NLF+FGD+DG  S+ L QHPLG+  + NG +YVA
Sbjct: 760  SSSVRSVNLKTGGSQWLSGGDPAFPENLFQFGDKDGPASQALFQHPLGILSSANGAVYVA 819

Query: 854  DSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN 913
            D+YNHKIK +D AS  V T+AG G AG++DG  + AQ SEPAG+    NG+LF+ADTNNN
Sbjct: 820  DTYNHKIKLMDLASKTVRTVAGTGVAGYEDGKGVKAQFSEPAGLALGPNGSLFVADTNNN 879

Query: 914  IIRYLDLNKEEPELQ--TLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNI 971
            +IR L    ++  +Q  TLELKGV+PP P  +SP+RLRRR S D + + +       G++
Sbjct: 880  VIRLLKPRPDDNAIQVTTLELKGVEPPRPLEKSPRRLRRRPSSDMEVVRLQAVPGLRGDL 939

Query: 972  YLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGR 1031
             L+I LP  YHFSKEA SK+ VDVEP+++V + P  G L  +G A L F R  P+ S  R
Sbjct: 940  QLQIDLPPGYHFSKEATSKYEVDVEPDDSVDVKPDKGTLQ-DGRASLSFERSKPTRSLLR 998

Query: 1032 ISCKVYYCKEDEVCLYKPLLFEVPFQE-----EVPNSPPAEITL 1070
            I  KVYYC+E++VCLYK ++ EVP +E     E  +S P ++T+
Sbjct: 999  IISKVYYCEEEKVCLYKGIVVEVPLEESNGGTEDSSSIPVKLTV 1042


>gi|108707787|gb|ABF95582.1| HAD-superfamily hydrolase, subfamily IA, variant 3 containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 772

 Score =  965 bits (2494), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/692 (69%), Positives = 555/692 (80%), Gaps = 33/692 (4%)

Query: 76  WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV 135
           WGKVSAVLFDMDGVLCNSEE SR A VD+FAEMGV+VT +DF+P+MGTGEANFLGGVA +
Sbjct: 77  WGKVSAVLFDMDGVLCNSEELSRLAGVDLFAEMGVDVTGDDFVPYMGTGEANFLGGVAKL 136

Query: 136 KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
           KGVK F++E+AKKRFFEIYLDKYAKPN+GIGFPGAL+L+ +CK+ GLKVAVASSADRIKV
Sbjct: 137 KGVKDFNAESAKKRFFEIYLDKYAKPNAGIGFPGALDLVTECKNAGLKVAVASSADRIKV 196

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           DANLAAAGLP+S+FDAIVSADAFENLKPAPDIFL+ASK L V T ECIVIEDALAGVQAA
Sbjct: 197 DANLAAAGLPLSLFDAIVSADAFENLKPAPDIFLAASKTLGVDTDECIVIEDALAGVQAA 256

Query: 256 KAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAA 315
           KAA+MRCIAV TTL E+ L++ASPSLIRK IG +S+ DIL GG  +Y      H++L+ A
Sbjct: 257 KAAEMRCIAVMTTLEEDALQQASPSLIRKNIGDISIRDILYGGSNAY------HKILNGA 310

Query: 316 SQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNW 375
           +   +A             T +A     S  GL GSRR ILRYGSLG+A SCL +   NW
Sbjct: 311 TNAESAP-----------STNSASSIDDSREGLVGSRRNILRYGSLGIAVSCLIYTTRNW 359

Query: 376 KAMQYASPKAIWNVLF-GVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFP 434
           K + + +    +N  F  V+  S   +   SS SE++     Y+      K   I+    
Sbjct: 360 KLVIFLNT---YNYHFYTVHGMSLAASITQSSLSEQLTPCSLYLP-----KGCLIISRVE 411

Query: 435 AKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHS 494
                     L   +DLKG+VV+LDFWTYCCINCMHVLPDLEF+EKKYKD PFTVVGVHS
Sbjct: 412 I------VRYLLVMKDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHS 465

Query: 495 AKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAG 554
           AKFDNEKDLEAIRNAVLRY I+HPVVNDGDM LWRELGVNSWPTF V+GPNGK+LAQ++G
Sbjct: 466 AKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFVVIGPNGKVLAQISG 525

Query: 555 EGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR 614
           EGHRKDLDD+V AAL FY + KLL N+ LPL+LEKD D RL  SPLKFPGKLAID+LNNR
Sbjct: 526 EGHRKDLDDVVGAALEFYEENKLLQNSSLPLALEKDKDSRLLASPLKFPGKLAIDVLNNR 585

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           LFISDSNHNRIVVT+L+G FI QIGSS EEGL DG+FD A+FNRPQGLAYN+KKN+LYVA
Sbjct: 586 LFISDSNHNRIVVTNLEGEFICQIGSS-EEGLLDGTFDTASFNRPQGLAYNSKKNILYVA 644

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           DTENHALREI+FV++TV+TLAGNGTKGSDY+GG +GT+Q+LNSPWDVCY P  E +YIAM
Sbjct: 645 DTENHALREINFVSETVKTLAGNGTKGSDYRGGGQGTNQVLNSPWDVCYDPSKETLYIAM 704

Query: 735 AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS 766
           AGQHQIW+H+T+DGVT   SGDGYERNLNGSS
Sbjct: 705 AGQHQIWKHNTLDGVTEVLSGDGYERNLNGSS 736



 Score = 40.0 bits (92), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 12/181 (6%)

Query: 712 SQLLNSPWD----VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767
           S+LL SP      +    +N +++I+ +  ++I   + ++G      G   E  L+G+  
Sbjct: 564 SRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVV-TNLEGEFICQIGSSEEGLLDGTFD 622

Query: 768 LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
              SF +P G++ +     +YVAD+E+ ++R +N  +   + LAG      D  ++ G  
Sbjct: 623 -TASFNRPQGLAYNSKKNILYVADTENHALREINFVSETVKTLAGNGTKGSD--YRGG-- 677

Query: 828 DGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAA 886
            G G+  +L  P  V Y      +Y+A +  H+I K +        L+G G     +G++
Sbjct: 678 -GQGTNQVLNSPWDVCYDPSKETLYIAMAGQHQIWKHNTLDGVTEVLSGDGYERNLNGSS 736

Query: 887 L 887
           L
Sbjct: 737 L 737


>gi|307106270|gb|EFN54516.1| hypothetical protein CHLNCDRAFT_31604 [Chlorella variabilis]
          Length = 1072

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/1016 (49%), Positives = 667/1016 (65%), Gaps = 71/1016 (6%)

Query: 78   KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEM-GVEVTVEDFLPFMGTGEANFLGGVASVK 136
            +V A+LFDMDGVLC+SEE SR AA +V  E+ G+EV   +F+ + GTGEANFLGGVA   
Sbjct: 78   EVRAILFDMDGVLCDSEEISREAACEVMKELYGLEVEPSEFIEYTGTGEANFLGGVARKY 137

Query: 137  GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
            G   F+ E+ K +FFEIY+ +YA+  S I   GA  L+  C++ GLK AVASSADR+KVD
Sbjct: 138  GAP-FEVESCKAKFFEIYM-RYAQKTS-IAHAGARSLVEACRAAGLKTAVASSADRVKVD 194

Query: 197  ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
            ANLAA+ +P+ +FDAIVSADAF+NLKP+PDIFL+A+  L V  + C+VIEDA+AGVQAA+
Sbjct: 195  ANLAASDIPLDLFDAIVSADAFQNLKPSPDIFLAAAAQLGVDPANCVVIEDAVAGVQAAR 254

Query: 257  AAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAAS 316
            AA MR I V+TTL+   ++ A+P  I+ ++  +++ DI               + L   S
Sbjct: 255  AAGMRVIGVSTTLTPAVMQSAAPDWIQADVLGITVADI---------------QGLKLPS 299

Query: 317  QNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNWK 376
              + A         S  + G  +      +G + +RR++L+  SLG AF+ L+  +S  +
Sbjct: 300  GGTVA---------SPSNRGWMEGVVYLPAGYRTTRRDLLKSASLGGAFASLYVGISRAQ 350

Query: 377  AMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAK 436
            ++ YASPKA+ N LF   +P   +  GGS    R+  F  YI+D+E R    +VPEFPA 
Sbjct: 351  SLSYASPKALLNALFPPAQPPPMEDIGGS----RVAAFKRYIADLEKRGGGQVVPEFPAG 406

Query: 437  LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
            +DW N APL+  R+L+GK++VLDF+TYCCINCMHVLP+L  LE+KY  +   VVGVHSAK
Sbjct: 407  VDWFNCAPLRLDRELRGKILVLDFFTYCCINCMHVLPELASLERKYP-LNLAVVGVHSAK 465

Query: 497  FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
            FDNEKD +AIR+AVLRY + HPVVND  M LWR LGV+SWPT AVV P GKL+A L+GEG
Sbjct: 466  FDNEKDSDAIRSAVLRYEVEHPVVNDSGMTLWRGLGVSSWPTLAVVSPQGKLIAMLSGEG 525

Query: 557  HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKL-AIDILNNRL 615
            H++D+DD+V AA+  YG++ LLD TPLPL+LE++ DPRL  SPL+FPG   A+     RL
Sbjct: 526  HKQDVDDIVAAAIEHYGRQGLLDATPLPLALEREKDPRLAASPLRFPGACKAVSDRAGRL 585

Query: 616  FISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675
            FISDSN+NRIVV D +G F+  IG  G  GL DGS++DA F RPQG+AY+AK++ LYVAD
Sbjct: 586  FISDSNNNRIVVCDENGRFLEAIG-CGAPGLVDGSYEDAAFFRPQGIAYSAKRDCLYVAD 644

Query: 676  TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735
            TE+HALR++D    TV TLAGNG KGSDY+GG  G SQL+NSPWD         VY+AMA
Sbjct: 645  TESHALRQVDLQKQTVFTLAGNGAKGSDYRGGGSGASQLMNSPWD-------RYVYVAMA 697

Query: 736  GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESS 795
            G HQIW   T  G+  +FSG G+ER  NG S+L T++AQPSG+SL+P    ++VADSESS
Sbjct: 698  GLHQIWRFDTSTGIASSFSGTGFERFQNGPSALTTAWAQPSGLSLAPTGDALFVADSESS 757

Query: 796  SIRALNLKTGGSRLLAGGDPIFPDNLF-------------KFGDRDGMGSEVLLQHPLGV 842
            ++R L+L +GGS+   GGD +F +NLF             +FGD+DG GS+ LLQHPL V
Sbjct: 758  TVRRLDLGSGGSQACVGGDALFAENLFRKECATLRVTLLCRFGDKDGTGSDALLQHPLAV 817

Query: 843  YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
              A +G++YVADSYNH++K+LDPA+N + TLAG G AG++DG    AQLSEPAG+    +
Sbjct: 818  LAAPSGKVYVADSYNHRLKELDPATNTIRTLAGSGAAGYRDGVGTTAQLSEPAGLAAGPD 877

Query: 903  GNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP--TPKSRSPKRLRRRSSPDAQTIV 960
            G + I DTNN++IR  D   +   L TL LKGV PP  +P+          + P    ++
Sbjct: 878  GTVIICDTNNSLIRTYDPRTQ--RLTTLALKGVPPPRRSPQGPPAGDASPSADPPPGAVL 935

Query: 961  VDGG---LSNEGNIYLKISLPEEYHFSKEARSKFS-VDVEPENAVIIDPLDGNLSPE--- 1013
            V       +  G + L I LP  YH +  A S FS V +     V + P  G L+ +   
Sbjct: 936  VQAPSAVTAASGEVRLSIRLPPGYHLTPGANSNFSAVVLGGGGGVQLRPPAGILTEDASG 995

Query: 1014 --GSAVLHFRRMSPSVSTG---RISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSP 1064
                A + F R + S  +G   RI  K+Y+C+  +VCL++ L F+VP  +    SP
Sbjct: 996  SAAIAAIRFSRQAGSGGSGLLLRIVAKLYFCQLGDVCLFQELCFDVPLADASGASP 1051


>gi|147775279|emb|CAN61591.1| hypothetical protein VITISV_030553 [Vitis vinifera]
          Length = 659

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/630 (71%), Positives = 511/630 (81%), Gaps = 31/630 (4%)

Query: 12  ASSLSLQTKLFFFSPNTKQLRPSSVSSALFQCGAKRTVLGRRMVV--KACVTKVEETDVN 69
           +SS    T  F F P +     S+  S + +  ++   L  R     KACV K+EE +V 
Sbjct: 6   SSSQRHHTTPFIFPPPSI----STPLSLIRRLSSRHVSLRHRRTAAPKACV-KLEEKNVP 60

Query: 70  VSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFL 129
            + +S+WGKVSAVLFDMDGVLCNSEEPSRRA VDVF EMGV+VT EDF+PFMGTGEANFL
Sbjct: 61  ETGKSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVFHEMGVQVTTEDFVPFMGTGEANFL 120

Query: 130 GGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASS 189
           GGVASVKGVKGFD EAAKKRFFEIYL+KYAKPNSGIGFPGALELINQCKS GLKVAVASS
Sbjct: 121 GGVASVKGVKGFDPEAAKKRFFEIYLEKYAKPNSGIGFPGALELINQCKSNGLKVAVASS 180

Query: 190 ADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
           ADRIKVDANLAAAGLP+SMFDAIVSADAFENLKPAPDIFL+ASKIL+VP  ECIVIEDAL
Sbjct: 181 ADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASKILDVPPGECIVIEDAL 240

Query: 250 AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYN------ 303
           AGVQAAKAAQMRCIAVTTTL EE LK A PSLIRKEIG+V   + L+ G   ++      
Sbjct: 241 AGVQAAKAAQMRCIAVTTTLPEETLKAAGPSLIRKEIGNVF--NYLSSGTMRFDGDKPLQ 298

Query: 304 -EKIQEHELLHAASQNSTALLKEKTDNW-----SILDTGAADEKGSST-SGLQGSRREIL 356
             + ++  +L   ++     LK++   +     +++  G++  +G +      GSRR+++
Sbjct: 299 MRRYRDLSILILLNKLHLKCLKKEQKVYQSRKQTLMVVGSSQLRGKTVIKKAPGSRRDMV 358

Query: 357 RYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVN 416
           RYGSLG+A SCL FAVSNWKAMQYASPKAIWN+LFGVNRP+F + E G SQ+ RIQQFVN
Sbjct: 359 RYGSLGIALSCLAFAVSNWKAMQYASPKAIWNLLFGVNRPTFGKNE-GESQTGRIQQFVN 417

Query: 417 YISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           YISD+E+         F    DWLN+APLQ RRDLKGKVVVLDFWTYCCINCMHVLPDLE
Sbjct: 418 YISDLES--------SFHLNFDWLNSAPLQLRRDLKGKVVVLDFWTYCCINCMHVLPDLE 469

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
           FLE KYKD PFTVVGVHSAKFDNEKDLEAIRNAVLRYGI+HPVVNDGDM LWRELGVNSW
Sbjct: 470 FLETKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYGINHPVVNDGDMYLWRELGVNSW 529

Query: 537 PTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF 596
           PTFAVVGPNGKLLAQL+GEG RKDLDD+V AAL+FYG+KK+LDN+PLPLSLEK+NDPRL 
Sbjct: 530 PTFAVVGPNGKLLAQLSGEGRRKDLDDIVAAALIFYGEKKMLDNSPLPLSLEKENDPRLL 589

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIV 626
           TSPLKFPGKLAID++NNRLFISDSNHNRIV
Sbjct: 590 TSPLKFPGKLAIDVINNRLFISDSNHNRIV 619


>gi|384248465|gb|EIE21949.1| hypothetical protein COCSUDRAFT_16964 [Coccomyxa subellipsoidea
            C-169]
          Length = 1021

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/1035 (47%), Positives = 651/1035 (62%), Gaps = 74/1035 (7%)

Query: 79   VSAVLFDMDGVLCNSEEPSRRAAVDVFAEM-GVEVTVEDFLPFMGTGEANFLGGVASVKG 137
            V A+LFDMDGVLCNSEE ++R   +   ++ GV V  ++F  F G GEA FL GVA   G
Sbjct: 22   VQAILFDMDGVLCNSEEMTQRVGAETLLKVYGVTVDPDEFRAFAGMGEAYFLSGVAGKYG 81

Query: 138  VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
            ++  D +  K+ F+ IYL+K A P   IG PGA+EL+  C+  GLKVAVASSADR+KVDA
Sbjct: 82   IQIDDIDKLKEVFYGIYLEKAADPTEDIGLPGAIELVKACREAGLKVAVASSADRVKVDA 141

Query: 198  NLAAAGLPVSM-FDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
            NL   G      FDAIVSAD FE LKPAPDIFL+A++ + V  S CIV+EDA AGVQAA+
Sbjct: 142  NLKLVGFDAEADFDAIVSADLFERLKPAPDIFLAAAREVGVEPSACIVVEDAAAGVQAAR 201

Query: 257  AAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEHELLHAAS 316
            AA MR + VTTTLS++ +    P  +R  I  +S+ D+L G              LH A+
Sbjct: 202  AAGMRVVGVTTTLSKQDMLAQRPDEVRPTIAEISV-DLLQG--------------LHWAA 246

Query: 317  QNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILRYGSLGVAFSCLFFAVSNWK 376
            ++ +A   E+  N       +  E G S +G      +I      GV     +FA    +
Sbjct: 247  RDESA--AEERAN-------SGKEAGPSDNGATNFHAQI------GV---LTWFASPRMQ 288

Query: 377  AMQYASPKAIWNVLFGVNRPSFEQTEGGSSQ-SERIQQFVNYISDVENRKTTPIVPEFPA 435
            AM +ASPKAI N L  + RPS   T G S + SER   F  +I  VE R     VP+FPA
Sbjct: 289  AMSFASPKAILNAL--LPRPS--PTTGLSQERSERAAAFRRFIESVERRGGGEEVPDFPA 344

Query: 436  KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSA 495
               W N+ PL+  R+LKGKVVVLDFWTYCCINCMHVLP+L  LE+KY   P  VVGVHSA
Sbjct: 345  GAQWFNSPPLKLSRELKGKVVVLDFWTYCCINCMHVLPELAALERKYAGRPVAVVGVHSA 404

Query: 496  KFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGE 555
            KFDNEKD EAIRNAVLRY I+HPV+ND  M LWR+LG+ SWPT  VV P G+++A L GE
Sbjct: 405  KFDNEKDNEAIRNAVLRYDITHPVINDARMVLWRDLGIASWPTLLVVSPRGRVIATLPGE 464

Query: 556  GHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKD-NDPRLFTSPLKFPGKLAIDILNNR 614
            G+++++DD++ AAL +YG++ +LD+TP+P++LE++       +SPL++PGKL  D+   R
Sbjct: 465  GNQQNVDDMLAAALEYYGERGMLDDTPVPMTLERERRGSATASSPLRYPGKLTADLAGGR 524

Query: 615  LFISDSNHNR--------IVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA 666
            LFISDSN++R        +  T   G F+ QIG +G   LRDG++  A   RPQGLAY+A
Sbjct: 525  LFISDSNNHRHAAHATALLHSTPHPGRFLDQIGGNG-PALRDGAYQAAALYRPQGLAYSA 583

Query: 667  KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG-SDYQGGEKGTSQLLNSPWDVCYKP 725
            +++ LYVADTEN+ALRE++    T+RTLAG+G K   DY GG  G +Q LNSPWD+ +  
Sbjct: 584  RRDCLYVADTENNALREVNLKTRTLRTLAGDGAKAEQDYTGGRSGRAQRLNSPWDLAFNA 643

Query: 726  I--------NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
                      + +YIAMAGQHQIW H    G   AFSGDGYERN NG++   TS+AQPSG
Sbjct: 644  QANHQLGNPEDSLYIAMAGQHQIWRHDLASGSMAAFSGDGYERNANGATGPATSWAQPSG 703

Query: 778  ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
            +SLS D  E++VADSESS++R+++L +GG +   GGDP+F DNLF+FGD+DG G+  LLQ
Sbjct: 704  LSLSADGRELWVADSESSTVRSMDLTSGGGKAHVGGDPLFADNLFRFGDKDGSGTGALLQ 763

Query: 838  HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI 897
            HPL V    NG + VADSYNH++K LDPA++ + T+AG G AG  DG    A++SEP G+
Sbjct: 764  HPLAVLALSNGDVIVADSYNHRLKLLDPATDSIRTVAGSGAAGLTDGTGGNARVSEPGGL 823

Query: 898  IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT-----PKSRSPKRLRRRS 952
                 G +FIADTNN+ IR  D   +   L+TLELK V PPT       + SP      +
Sbjct: 824  CAGPRGTVFIADTNNSAIRVFD--PKTGALRTLELKDVPPPTVSPDAAPADSPGSAEDPA 881

Query: 953  SPDAQTIVV--DGGLSNEGNIYLKISLPEEYHFSKEARSKFSVD-VEPENAVIIDPLDGN 1009
             P   T+VV      S   N++++I LP  YH +K A S+F    + P   VI+ P  G 
Sbjct: 882  IPKGATLVVSDAAIASASANLHVRIQLPRGYHLTKGANSRFEASALGPGAQVILQPSSGR 941

Query: 1010 LSPEGSAVLHFRRMS----PSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPP 1065
            L+     +    R++     SVS   I CKVY+C++ +VCL++ + F+VP + +   +  
Sbjct: 942  LTETAEELSADVRVNLSTLDSVSGILIFCKVYFCQDQDVCLFEEIYFKVPVRVQA-GTGG 1000

Query: 1066 AEITLPYDLKPKILT 1080
             E+ + Y L PK  T
Sbjct: 1001 GEVCVSYALSPKAQT 1015


>gi|242041147|ref|XP_002467968.1| hypothetical protein SORBIDRAFT_01g037270 [Sorghum bicolor]
 gi|241921822|gb|EER94966.1| hypothetical protein SORBIDRAFT_01g037270 [Sorghum bicolor]
          Length = 607

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/494 (72%), Positives = 411/494 (83%), Gaps = 11/494 (2%)

Query: 70  VSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFL 129
           V+  + WGKVSAVLFDMDGVLC+SEEPSR+A VDVFAEMGVEVTV+DF+PFMGTGEANFL
Sbjct: 71  VAEGAAWGKVSAVLFDMDGVLCDSEEPSRQAGVDVFAEMGVEVTVDDFVPFMGTGEANFL 130

Query: 130 GGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASS 189
           GGVA  KGVKGF+ E+AKKRFFEIYLDKYAKPNSGIGFPGALELI +CK+ GLKVAVASS
Sbjct: 131 GGVARAKGVKGFNPESAKKRFFEIYLDKYAKPNSGIGFPGALELIMECKNSGLKVAVASS 190

Query: 190 ADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
           ADRIKVDANLAAAGLPVS+FDAIVSADAFENLKPAPDIFL+ASK L V T++CIVIEDAL
Sbjct: 191 ADRIKVDANLAAAGLPVSLFDAIVSADAFENLKPAPDIFLAASKNLGVDTNKCIVIEDAL 250

Query: 250 AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYNEKIQEH 309
           AGVQAAKAA+MRCIAVTTTL E  L++ SPSLIRK IG +S+NDIL GG  + + +  E+
Sbjct: 251 AGVQAAKAAEMRCIAVTTTLEEVALQQGSPSLIRKNIGDISINDILYGGSNARHNEGAEN 310

Query: 310 ELLHAASQNSTALLKEKTDNWS-ILDTGAADEKGSSTS---GLQGSRREILRYGSLGVAF 365
                 ++NS+++     ++ +     G +D KGS TS   GL GSRREILRYGSLG+A 
Sbjct: 311 ------TENSSSVRNALPESLNGTTGAGLSDTKGSPTSKNEGLLGSRREILRYGSLGIAL 364

Query: 366 SCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRK 425
           SC F AV NWKAMQ+ASPK + N   G N   F + E G S S R+QQ   Y+++ E+  
Sbjct: 365 SCFFVAVRNWKAMQFASPKGLLNFFMGGNSSVFARNE-GESLSSRVQQIKKYLAEFESGG 423

Query: 426 TTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM 485
           +   VPEFP KLDWLNTAPLQF RDLKG+VV+LDFWTYCCINCMHVLPDLEF+EKKYK+ 
Sbjct: 424 SATYVPEFPRKLDWLNTAPLQFGRDLKGRVVLLDFWTYCCINCMHVLPDLEFVEKKYKEK 483

Query: 486 PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPN 545
           PFTVVGVHSAKFDNEKDLEAIRNAVLRY ++HPVVNDGDM LWRELGVNSWPTF ++GPN
Sbjct: 484 PFTVVGVHSAKFDNEKDLEAIRNAVLRYNVTHPVVNDGDMYLWRELGVNSWPTFVLIGPN 543

Query: 546 GKLLAQLAGEGHRK 559
           GK+LAQ++GEGHRK
Sbjct: 544 GKVLAQISGEGHRK 557


>gi|302834543|ref|XP_002948834.1| hypothetical protein VOLCADRAFT_80356 [Volvox carteri f. nagariensis]
 gi|300266025|gb|EFJ50214.1| hypothetical protein VOLCADRAFT_80356 [Volvox carteri f. nagariensis]
          Length = 774

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/754 (48%), Positives = 479/754 (63%), Gaps = 56/754 (7%)

Query: 346  SGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGS 405
            +G + +RRE+L++ SL  A  C + A +  KAM +ASP+A+ N L  +  P+ E  +GG 
Sbjct: 3    AGYRTTRRELLKFASLAGAAGCFYVAATRSKAMSFASPQALINAL--MPPPAPESLDGG- 59

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQF------RRDLKGKVVVLD 459
               +R+  F  YI+D+E R     VP+FP   DWLN+APL        R  L G+VV+LD
Sbjct: 60   ---DRVAAFKRYIADLERRGGGREVPDFPRGADWLNSAPLTLTGPPTSRGSLAGRVVLLD 116

Query: 460  FWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPV 519
            FWTYCCINC+H LPDL  LE ++   P  VVGVHSAKFDNEKD  AIR AVLRY ISHPV
Sbjct: 117  FWTYCCINCIHALPDLAELETQFASAPVAVVGVHSAKFDNEKDSSAIRAAVLRYDISHPV 176

Query: 520  VNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLD 579
            VND  M +W  LGV+SWPT AVV P GKL+A L+GEGHR+DL+DL+ AAL +YG+   LD
Sbjct: 177  VNDRGMAVWAALGVSSWPTLAVVSPGGKLIAMLSGEGHRQDLEDLITAALQYYGETGQLD 236

Query: 580  -NTPLPLSLEKDNDP--RLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIV 636
             +TPLPL+LE++  P      SPL++PGK+A D+ + RLF+SDSN++RIV+TDL+G FI 
Sbjct: 237  GSTPLPLALERNKTPPESAVASPLRYPGKIASDLSSGRLFVSDSNNHRIVITDLNGRFIE 296

Query: 637  QIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG 696
            QIG +G   LRDGSF+ A FNRPQGL ++ ++N L+VADTENHA+R  D  ++TV TLAG
Sbjct: 297  QIGGNGP-ALRDGSFETAAFNRPQGLVFSPRRNQLFVADTENHAVRCCDLTSNTVITLAG 355

Query: 697  NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD 756
            NG+KG DY+GG  G++Q LNSPWDV      + +YIA+AGQHQIW+     G    FSG 
Sbjct: 356  NGSKGRDYRGGRGGSAQPLNSPWDVELDARQDYLYIALAGQHQIWDLELSSGTAALFSGT 415

Query: 757  GYERNLNGSSSLNTSFAQPSGISLSPDFMEI-YVADSESSSIRALNLKTGGSRLLAGGDP 815
            G ERN NG +   TS+AQPSG+SL+ D   + YVADSESS+IR L+L +GGS L  GGDP
Sbjct: 416  GAERNQNGPTPFTTSWAQPSGLSLAGDGSGLMYVADSESSTIRVLDLGSGGSGLKVGGDP 475

Query: 816  IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
            +F DNLF+FGD+DG G+E LLQHPL V  + +G  IYVADSYNH+IK L+P +N + TLA
Sbjct: 476  LFSDNLFRFGDKDGFGAEALLQHPLAVLSSADGSAIYVADSYNHRIKALNPNTNEIVTLA 535

Query: 875  GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934
            G G AGF+DG   AAQ SEPAG+    NG + IADTNN+ +R LD   +   + TL L G
Sbjct: 536  GSGAAGFRDGVGTAAQFSEPAGLCRGPNGTILIADTNNSAVRILDPKTQR--VSTLGLTG 593

Query: 935  VQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLS------------NEGNIYLKISLPEEYH 982
            V    P  R        +      + V  G              +  ++ + + LP  YH
Sbjct: 594  V----PDPRVDPLAAIAAGATVPGLAVPAGFQLVRTLQPLAVGPSGSSLTVTVGLPPGYH 649

Query: 983  FSKEARSKFSVDV------EPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTG------ 1030
             +  A S +   V          A ++ P  G L P+  A      +SP+ +        
Sbjct: 650  LTAGASSSYYCQVLAAAPGADATATVVRPASGQL-PDSVAPSVTLSVSPAAAPRAQSPPG 708

Query: 1031 -------RISCKVYYCKEDEVCLYKPLLFEVPFQ 1057
                   R+  KVYYC++++VCL++ + FEVP +
Sbjct: 709  GYDRLLLRVLAKVYYCQQNDVCLFEQICFEVPLE 742


>gi|440794391|gb|ELR15552.1| haloacid dehalogenase family hydrolase family protein [Acanthamoeba
            castellanii str. Neff]
          Length = 731

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 291/679 (42%), Positives = 404/679 (59%), Gaps = 49/679 (7%)

Query: 430  VPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
            V + P  + W N + PL    DL+GK+ VLDFWT+CCINC+HVLP+L  LE KY D    
Sbjct: 55   VKDLPQGVTWFNLSRPLSLSHDLRGKLSVLDFWTFCCINCIHVLPELAELEHKYADRAVV 114

Query: 489  VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
             VGVHSAKF+NEK+ EAI+ AV+RY I HPVVND D+ LW    ++ WPT  +VGP+ K 
Sbjct: 115  FVGVHSAKFENEKENEAIKQAVMRYDIHHPVVNDADLVLWNAYDIHCWPTLMLVGPDLKP 174

Query: 549  LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
            LA   GEG++  +D+ +  AL  + K +  D+  LP  LE++  P   TSPL +PGK+AI
Sbjct: 175  LALFTGEGNKAAVDEFIAVALDSFDKAEFSDHA-LPTLLEQNKSPA--TSPLLYPGKIAI 231

Query: 609  DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA-- 666
            D  + RLFISDSN++RIVVTDL G F+ +IG+ G  G +DGS+ +A FNR QG+AY+   
Sbjct: 232  DNEHGRLFISDSNNHRIVVTDLQGAFLEEIGTRGSLGFKDGSYAEAKFNRLQGVAYHKTD 291

Query: 667  KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            +   LYVAD ENHALR +D +  TV TLAG+GT+G+D+ GG+ G  Q L++PWDV   P 
Sbjct: 292  EHERLYVADAENHALRVVDLLAKTVTTLAGDGTQGNDFVGGKSGREQQLSTPWDVALSPD 351

Query: 727  NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
             +++++AMAG HQIWE S        +SGDG E N N ++ L  S+AQPSG+S+ P   E
Sbjct: 352  GQQLFVAMAGTHQIWEVSLDSSAVTNYSGDGQEMNRNNTNRLKASWAQPSGLSVGP--TE 409

Query: 787  IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
            I++AD+ESS+IRA++   G +R + GGD I P NLF +GD++G   E  LQHPLGV    
Sbjct: 410  IFIADAESSTIRAIHRTNGKTRTIVGGD-IDPKNLFAYGDKEGKAREARLQHPLGVCWVA 468

Query: 847  NG--QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAG-IIEAQNG 903
             G  ++   D+YNHK+K LDPA+N +S   G GK G  DG    AQ  EP+G  + A   
Sbjct: 469  GGLNRVVTTDTYNHKVKLLDPATNVISFWLGNGKPGLSDGVGAEAQFYEPSGACVTADGK 528

Query: 904  NLFIADTNNNIIRYLDLNKEEPELQTLELKGV------------QPPTPKSRSPKRLRRR 951
             +F+ DTNN+ IR +D++     ++TL+L G                TP+++  KRL  R
Sbjct: 529  TVFVCDTNNHAIRVIDVDT--AAVRTLDLTGFAAAATTSAPAASTTSTPQAQPLKRLVNR 586

Query: 952  SSPDAQTIVVDGG--LSNEGNIYLKISL----PEEYHFSKEARSKFSVDVEPE---NAVI 1002
            S     TI   G   +   G + L+I      P  +HF+  A S++ + V P+   +A+ 
Sbjct: 587  SRA---TITRRGPFVIPASGELKLRIKSAAIPPAGHHFTPGAPSQWQL-VAPQGQPSALF 642

Query: 1003 ID--PLDGNLSPEG-----SAVLHFRRMSPSVSTGRISCKVYYCKEDE-VCLYKPLLFEV 1054
             D   + G  S E        +L     +    T      VYYC +DE  C  + LL E+
Sbjct: 643  SDFTAMRGKFSTEAVDDVLVTLLIREDAAAEGETLEWEANVYYCSDDEGTCSAEALLIEI 702

Query: 1055 PFQEEVPNSPPAEITLPYD 1073
              +++   + PA  T P D
Sbjct: 703  VLEKQQETASPA--TTPAD 719


>gi|414866497|tpg|DAA45054.1| TPA: hypothetical protein ZEAMMB73_628261 [Zea mays]
          Length = 446

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/405 (65%), Positives = 302/405 (74%), Gaps = 15/405 (3%)

Query: 51  GRRMVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV 110
           GRR VV A            +  + WGKVSAVLFDMDGVLCNSEEPSR+A VDVFAEMGV
Sbjct: 49  GRRDVVAAAAASAPSPSSPGTEVAVWGKVSAVLFDMDGVLCNSEEPSRQAGVDVFAEMGV 108

Query: 111 EVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGA 170
           EV V+DF+PFMGTGEANFLGGVA  KGVK F+ E+AKKRFFEIYLDKYAKPNSGIGFPGA
Sbjct: 109 EVAVDDFVPFMGTGEANFLGGVARAKGVKDFNPESAKKRFFEIYLDKYAKPNSGIGFPGA 168

Query: 171 LELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230
           LELI +CK+ GLKVAVASSADRIKVDANLAAAGL V +FDAIVSADAFE LKPAPDIFL+
Sbjct: 169 LELILECKNSGLKVAVASSADRIKVDANLAAAGLSVFLFDAIVSADAFEKLKPAPDIFLA 228

Query: 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290
           ASK L V T+ECIVIEDALAGVQAA AA+MRCIAVTTTL E  L++ SPS IRK IG +S
Sbjct: 229 ASKSLGVDTNECIVIEDALAGVQAANAAEMRCIAVTTTLEEIALRQGSPSFIRKNIGDIS 288

Query: 291 LNDILTGGGGSYNEKIQEHELLHAASQNSTAL---LKEKTDNWSILDTGAADEKG---SS 344
           +NDIL GG  +       H     +++NS+++   L E  +  +    G +D KG   S 
Sbjct: 289 INDILYGGSNA------RHNEGAGSTENSSSVGNALSESLNGATA--AGHSDTKGFPISK 340

Query: 345 TSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGG 404
             GL GSRREILRYGSLG+A SCLF AV NWKAMQ+ASPK + N L G N   F + E G
Sbjct: 341 NKGLLGSRREILRYGSLGIALSCLFVAVRNWKAMQFASPKGLLNFLMGGNSSVFARNE-G 399

Query: 405 SSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRR 449
            S S R+QQ   Y+++ E+  +   VPEFP KLDWLNTAPLQF R
Sbjct: 400 ESLSSRVQQIKKYLAEFESGGSATYVPEFPRKLDWLNTAPLQFGR 444


>gi|226491870|ref|NP_001146693.1| uncharacterized protein LOC100280294 [Zea mays]
 gi|219888369|gb|ACL54559.1| unknown [Zea mays]
          Length = 446

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/405 (65%), Positives = 301/405 (74%), Gaps = 15/405 (3%)

Query: 51  GRRMVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV 110
           GRR VV A            +  + WGKVSAVLFDMDGVLCNSEEPSR+A VDVFAEMGV
Sbjct: 49  GRRDVVAAAAASAPSPSSPGTEVAVWGKVSAVLFDMDGVLCNSEEPSRQAGVDVFAEMGV 108

Query: 111 EVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGA 170
           EV V+DF+PFMGTGEANFLGGVA  KGVK F+ E+AKKRFFEIYLDKY KPNSGIGFPGA
Sbjct: 109 EVAVDDFVPFMGTGEANFLGGVARAKGVKDFNPESAKKRFFEIYLDKYEKPNSGIGFPGA 168

Query: 171 LELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230
           LELI +CK+ GLKVAVASSADRIKVDANLAAAGL V +FDAIVSADAFE LKPAPDIFL+
Sbjct: 169 LELILECKNSGLKVAVASSADRIKVDANLAAAGLSVFLFDAIVSADAFEKLKPAPDIFLA 228

Query: 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290
           ASK L V T+ECIVIEDALAGVQAA AA+MRCIAVTTTL E  L++ SPS IRK IG +S
Sbjct: 229 ASKSLGVDTNECIVIEDALAGVQAANAAEMRCIAVTTTLEEIALRQGSPSFIRKNIGDIS 288

Query: 291 LNDILTGGGGSYNEKIQEHELLHAASQNSTAL---LKEKTDNWSILDTGAADEKG---SS 344
           +NDIL GG  +       H     +++NS+++   L E  +  +    G +D KG   S 
Sbjct: 289 INDILYGGSNA------RHNEGAGSTENSSSVGNALSESLNGATA--AGHSDTKGFPISK 340

Query: 345 TSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGG 404
             GL GSRREILRYGSLG+A SCLF AV NWKAMQ+ASPK + N L G N   F + E G
Sbjct: 341 NKGLLGSRREILRYGSLGIALSCLFVAVRNWKAMQFASPKGLLNFLMGGNSSVFARNE-G 399

Query: 405 SSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRR 449
            S S R+QQ   Y+++ E+  +   VPEFP KLDWLNTAPLQF R
Sbjct: 400 ESLSSRVQQIKKYLAEFESGGSATYVPEFPRKLDWLNTAPLQFGR 444


>gi|242041143|ref|XP_002467966.1| hypothetical protein SORBIDRAFT_01g037250 [Sorghum bicolor]
 gi|241921820|gb|EER94964.1| hypothetical protein SORBIDRAFT_01g037250 [Sorghum bicolor]
          Length = 360

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/355 (63%), Positives = 278/355 (78%), Gaps = 1/355 (0%)

Query: 734  MAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793
            MAGQHQIW+H   DGVT+  SGDGYERNLNGSS+ +TSFAQPSGISL+ +  E++V DSE
Sbjct: 1    MAGQHQIWKHIVRDGVTKVISGDGYERNLNGSSATSTSFAQPSGISLASEMQELFVVDSE 60

Query: 794  SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVA 853
            SSSIR +NLKTGGSRLLAGGDP+FP+NLF+FGD DG GS+VLLQHPLGV  A + Q+Y+A
Sbjct: 61   SSSIRVVNLKTGGSRLLAGGDPVFPENLFRFGDYDGTGSDVLLQHPLGVAYASDNQVYIA 120

Query: 854  DSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN 913
            DSYNHKIKKLDP + +V+T+AG G+AG+KDG  LAAQLSEPAG++E  +G L +ADTNNN
Sbjct: 121  DSYNHKIKKLDPVTRKVTTIAGTGRAGYKDGPGLAAQLSEPAGLVEVGDGRLLVADTNNN 180

Query: 914  IIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYL 973
             IRY+ L+ +  E++TLEL GVQPP+PK ++ KRLRRR S D   I+VDGG S EG + L
Sbjct: 181  TIRYITLSDKGAEVKTLELIGVQPPSPKPKALKRLRRRLSADTDVIIVDGGSSKEGFLSL 240

Query: 974  KISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRIS 1033
             I++P+ YHFSKEARSKF V+ EP N V I+P  G L+ EG A L FRR+S S S GRI+
Sbjct: 241  AITVPDGYHFSKEARSKFDVETEPPNEVEIEPASGFLNSEGQASLKFRRISSSFSMGRIN 300

Query: 1034 CKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEITLPYDLKPKILTNSLQLPVA 1088
            CKVYYCKEDEVCLY+ + F+V F+EE   S PA+I L Y + P+  + S QL  A
Sbjct: 301  CKVYYCKEDEVCLYQSVAFDVKFREEAEPS-PAQIMLSYSVSPRDNSGSTQLIAA 354



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 631 DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDT 690
           DG   V  G   E  L   S    +F +P G++  ++   L+V D+E+ ++R ++     
Sbjct: 14  DGVTKVISGDGYERNLNGSSATSTSFAQPSGISLASEMQELFVVDSESSSIRVVNLKTGG 73

Query: 691 VRTLAG-------NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH 743
            R LAG       N  +  DY G   G+  LL  P  V Y   N+ VYIA +  H+I + 
Sbjct: 74  SRLLAGGDPVFPENLFRFGDYDG--TGSDVLLQHPLGVAYASDNQ-VYIADSYNHKIKKL 130

Query: 744 STVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
             V       +G G     +G   L    ++P+G+    D   + VAD+ +++IR + L 
Sbjct: 131 DPVTRKVTTIAGTGRAGYKDG-PGLAAQLSEPAGLVEVGD-GRLLVADTNNNTIRYITLS 188

Query: 804 TGGSRL 809
             G+ +
Sbjct: 189 DKGAEV 194


>gi|432922359|ref|XP_004080313.1| PREDICTED: NHL repeat-containing protein 2-like [Oryzias latipes]
          Length = 720

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 288/700 (41%), Positives = 394/700 (56%), Gaps = 63/700 (9%)

Query: 402  EGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDF 460
            E  ++Q E+ +    ++  V+ R+ T I P+F   L+WLNT APL   +DL GKVV+LDF
Sbjct: 22   ENATTQEEKEELVHQFLERVDEREDTKI-PDFQTGLEWLNTDAPLSLNKDLAGKVVLLDF 80

Query: 461  WTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPV 519
            +TYCCINCMH+LPDL  LEK++       ++GVHSAKF NEK L+ IR+AVLRY I HPV
Sbjct: 81   FTYCCINCMHILPDLHQLEKRHSTQDGLVIIGVHSAKFPNEKILDNIRSAVLRYNICHPV 140

Query: 520  VNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLD 579
            VNDG+ +LW EL V+ WPT  ++GP G LL  L GEGH + L    +AAL FYG K  L 
Sbjct: 141  VNDGEASLWHELEVSCWPTLVLLGPRGNLLFSLVGEGHSEKLTLFTDAALRFYGGKGQLK 200

Query: 580  NTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIG 639
               L + L KD+   L  S L FPGK+AID    RL I+D+ H+RI+V    G  +  IG
Sbjct: 201  AHALKIRLYKDS---LACSILSFPGKVAIDKSTQRLVIADTGHHRILVVSSAGQLLHVIG 257

Query: 640  SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
                 G +DGS  +A+FN PQG+A+  K + +YVADTENH +R+ID     V T+AG G 
Sbjct: 258  GPA-SGRKDGSLSEASFNSPQGVAF--KGDAVYVADTENHLIRKIDLSGGRVSTIAGAGV 314

Query: 700  KGSDYQGGEKGTSQLLNSPWDVCYKPI----NEKVYIAMAGQHQIWEHSTVD-------- 747
            +G+D +GG  G  Q ++SPWDV         +  ++IAMAG HQIW     D        
Sbjct: 315  QGTDREGGAVGVQQPISSPWDVTLGTAGGEEDNVLWIAMAGTHQIWALFLADGKLPKGGE 374

Query: 748  ---GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNL 802
               GV   ++G G E N N S      FAQPSG++L+ +  +  +YVADSESS+IR+L L
Sbjct: 375  FKAGVCVRWAGSGSEENRNNSYPHKAGFAQPSGLALATEEPWNCLYVADSESSTIRSLAL 434

Query: 803  KTGGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHK 859
            K G  +LL GG  DP+   NLF FGD DG G E  LQHPLGV +  +   +YVADSYNHK
Sbjct: 435  KDGAVKLLVGGERDPL---NLFAFGDADGKGVEAKLQHPLGVAWSPRQSLLYVADSYNHK 491

Query: 860  IKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRY 917
            IK +DP +   STLAG G+AG   G  L  +  +EP GI     G  L++ADTNN+ I+ 
Sbjct: 492  IKVVDPKTKVCSTLAGTGEAGDSLGPELTESCFNEPGGICVGGEGKLLYVADTNNHQIKV 551

Query: 918  LDLNKEE----PELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYL 973
            LDL  +     P    +    V  P  ++++P   +  +  +   + V  G +    + L
Sbjct: 552  LDLLSKTVSVFPVSSEVTDSTVSKPLGRTKAPPLPKSAARKEMPPVEVSAGQTV--TMSL 609

Query: 974  KISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEG---------------SAVL 1018
             +SLPE    ++EA S + +  E +  +    LDG ++                  +A  
Sbjct: 610  TLSLPEGAKLTEEAPSCWVLSAEGDEWL----LDGQVTTGEVVDLSQPINISTRLPAAET 665

Query: 1019 HFRRMSPSVSTGRISCKVYYCKE-DEVCLYKPLLFEVPFQ 1057
             ++   P ++ G     V+YC E  + C+ K   F  P  
Sbjct: 666  EWKNNKPCLTLG---VWVFYCLEAGKACMMKAASFSQPLH 702


>gi|348508723|ref|XP_003441903.1| PREDICTED: NHL repeat-containing protein 2-like [Oreochromis
            niloticus]
          Length = 719

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 289/722 (40%), Positives = 406/722 (56%), Gaps = 80/722 (11%)

Query: 388  NVLFGVNRPSFEQTEGGSSQSER---IQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-A 443
            + LF V        +  ++Q E+   +QQ++  + + E+ K    +P+F   L+WLNT  
Sbjct: 8    STLFPVQSQLDNDLDDATTQQEKEDLVQQYLKKLDEREDLK----IPDFQTGLEWLNTEG 63

Query: 444  PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY--KDMPFTVVGVHSAKFDNEK 501
            PL   ++L GKVV+LDF+TYCCINC+H+LPDL  LEK++  KD    +VGVHSAKF NEK
Sbjct: 64   PLSLNKELAGKVVLLDFFTYCCINCIHILPDLHQLEKRHSVKD-GLVIVGVHSAKFPNEK 122

Query: 502  DLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDL 561
             L+ IR+AVLRY I HPVVND + +LW EL ++ WPT  ++GP G LL  L GEGHR  L
Sbjct: 123  VLDNIRSAVLRYDICHPVVNDSEASLWHELEISCWPTLVLLGPRGNLLFSLVGEGHRDRL 182

Query: 562  DDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSN 621
                + AL +YG + LL    + + L KD  P    S L FPGK+AID    RL I+D+ 
Sbjct: 183  MLFTDCALRYYGGRGLLKAHTVGIKLYKDALP---PSILSFPGKVAIDNSTKRLVIADTG 239

Query: 622  HNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHAL 681
            H+RI+V    G+ +  IG   E G +DG   +A+FN PQG+A   K + +YVADTENH +
Sbjct: 240  HHRILVVSSTGDLLHVIGGP-ESGRKDGDVSEASFNSPQGVAI--KGDTVYVADTENHLI 296

Query: 682  REIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI----NEKVYIAMAGQ 737
            R+ID +   V TLAG GT+G+D +GG  G  Q ++SPWDV         +  +++AMAG 
Sbjct: 297  RKIDLLEGKVSTLAGVGTQGTDKEGGAMGPQQPISSPWDVMLGTASGDEDNVLWVAMAGT 356

Query: 738  HQIWEHSTVD-----------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--F 784
            HQIW     D           G+   ++G G E N N +      FAQPSG++L+P+  +
Sbjct: 357  HQIWALFLADGKLPKGSESKAGICVRWAGSGNEENRNNAYPHKAGFAQPSGLALAPEEPW 416

Query: 785  MEIYVADSESSSIRALNLKTGGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
              +YVADSESS+IR L LK G  +LL GG  DP+   NLF FGD DG G +  LQHPLGV
Sbjct: 417  SCMYVADSESSTIRTLALKDGAVKLLVGGERDPL---NLFAFGDVDGKGVDAKLQHPLGV 473

Query: 843  -YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL-AAQLSEPAGIIEA 900
             + ++   +YVADSYNHKIK +DP + + STLAG G AG   G     +  +EP GI   
Sbjct: 474  AWASEQNLLYVADSYNHKIKVVDPKTKQCSTLAGTGDAGGTLGPEFNKSCFNEPGGICVG 533

Query: 901  QNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQ------------PPTPKSRSPKR 947
              G  L++ADTNN+ ++ LDL  +   L  +  +               P  PKS + K 
Sbjct: 534  DGGKLLYVADTNNHQVKVLDLASKTVSLLPISRECTDSLPTKPSGPTKAPTLPKSAARKE 593

Query: 948  LRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDP-- 1005
            +   +    QT+++           + +SLPE    ++EA S +++  E  N  ++D   
Sbjct: 594  MPPVAVTAGQTVIMS----------VTLSLPEGTKLTEEAPSCWALSAE-GNEWLLDHQV 642

Query: 1006 LDGN---------LSPEGSAVLHFRRMSPSVSTGRISCKVYYCKE-DEVCLYKPLLFEVP 1055
            L G+         +S +  AV+     SPS++   ++   YYC E  + C+ K   F  P
Sbjct: 643  LTGSIKDLSQPLCISAKLPAVMKELNGSPSLT---LAVWAYYCMEAGKACMMKAASFSQP 699

Query: 1056 FQ 1057
             Q
Sbjct: 700  LQ 701


>gi|317419409|emb|CBN81446.1| NHL repeat-containing protein 2 [Dicentrarchus labrax]
          Length = 719

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 287/696 (41%), Positives = 396/696 (56%), Gaps = 56/696 (8%)

Query: 402  EGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDF 460
            E   +Q E+       +  ++ R+   I P+F   L+WLNT  PL   ++L GKVV+LDF
Sbjct: 22   EEAQTQQEKENLVFQCLKKLDERQDLKI-PDFQTGLEWLNTEGPLSLNKELAGKVVLLDF 80

Query: 461  WTYCCINCMHVLPDLEFLEKKY--KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHP 518
            +TYCCINCMH+LPDL  LEKK+  KD    VVGVHSAKF NEK L+ +R+AVLRY I HP
Sbjct: 81   FTYCCINCMHILPDLHQLEKKHSVKDG-LVVVGVHSAKFPNEKFLDNVRSAVLRYDICHP 139

Query: 519  VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLL 578
            VVND + +LW EL V+ WPT  ++GP G LL  + GEGHR  L    + AL +YG++ LL
Sbjct: 140  VVNDSEAHLWHELEVSCWPTLVLLGPRGNLLFSIVGEGHRDRLMLFTDCALRYYGEQGLL 199

Query: 579  DNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI 638
                + + L +D+ P   TS L FPGK+AID    RL I+D+ H+RI++    G  +  I
Sbjct: 200  KTHAVKIKLYRDSLP---TSFLSFPGKVAIDSSEKRLAIADTGHHRILLLSSTGQLLHVI 256

Query: 639  GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
            G   E G RDG   +A+FN PQG+A   K + +YVADTENH +R+ID +   V TLAG G
Sbjct: 257  GGP-ESGRRDGDLSEASFNSPQGVAI--KGDTVYVADTENHLIRKIDLLEGRVSTLAGVG 313

Query: 699  TKGSDYQGGEKGTSQLLNSPWDVCYKPI----NEKVYIAMAGQHQIWEHSTVD------- 747
             +G+D  GG  G  Q ++SPWDV         +  ++IAMAG HQIW     D       
Sbjct: 314  IQGTDKDGGAMGPQQPISSPWDVTLGTAGGVEDNVLWIAMAGTHQIWALFLADGKLPKGS 373

Query: 748  ----GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALN 801
                G    ++G G E N N S     SFAQPSG++L+P+  +  +YVADSESS+IR L 
Sbjct: 374  ESKAGACVRWAGSGSEENRNNSYPHKASFAQPSGLALAPEEPWSCLYVADSESSTIRTLA 433

Query: 802  LKTGGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNH 858
            LK G  +LL GG  DP+   NLF FGD DG G +  LQHPLGV +  +   +YVADSYNH
Sbjct: 434  LKDGAVKLLVGGERDPM---NLFAFGDIDGKGVDAKLQHPLGVAWDPEQSLLYVADSYNH 490

Query: 859  KIKKLDPASNRVSTLAGIGKAGFKDGAAL-AAQLSEPAGIIEAQNGN-LFIADTNNNIIR 916
            KIK +DP + + STLAG G+AG   G     +  +EP GI    +G  L++ADTNN+ ++
Sbjct: 491  KIKVVDPKTKQCSTLAGTGEAGDTLGPEFNKSCFNEPGGICVGDHGKLLYVADTNNHQVK 550

Query: 917  YLDLNKEEPEL---QTLELKGV-QPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIY 972
             LDL  +   L    T+    V   P+  +++P   +  +  +   + V  G +    I 
Sbjct: 551  VLDLASKTVSLFPISTVCTDSVPSKPSGPAKAPTLPKSAARKEMPPVAVSAGQTLTMTIA 610

Query: 973  LKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----------NLSPEGSAVLHFRR 1022
            L  SLPE    ++EA S +++  E    ++  P+            ++S +  AV+    
Sbjct: 611  L--SLPEGTKLTEEAPSCWALSSEGNEWLLESPVVTGDIVDLSKPFSISTKLPAVIKDSN 668

Query: 1023 MSPSVSTGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
             +PS++   ++  VYYC E    C+ K   F  P Q
Sbjct: 669  RNPSLT---LAVWVYYCMETGNACMMKAASFNQPLQ 701


>gi|414866498|tpg|DAA45055.1| TPA: hypothetical protein ZEAMMB73_628261 [Zea mays]
          Length = 420

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/379 (64%), Positives = 281/379 (74%), Gaps = 16/379 (4%)

Query: 51  GRRMVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV 110
           GRR VV A            +  + WGKVSAVLFDMDGVLCNSEEPSR+A VDVFAEMGV
Sbjct: 49  GRRDVVAAAAASAPSPSSPGTEVAVWGKVSAVLFDMDGVLCNSEEPSRQAGVDVFAEMGV 108

Query: 111 EVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGA 170
           EV V+DF+PFMGTGEANFLGGVA  KGVK F+ E+AKKRFFEIYLDKYAKPNSGIGFPGA
Sbjct: 109 EVAVDDFVPFMGTGEANFLGGVARAKGVKDFNPESAKKRFFEIYLDKYAKPNSGIGFPGA 168

Query: 171 LELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230
           LELI +CK+ GLKVAVASSADRIKVDANLAAAGL V +FDAIVSADAFE LKPAPDIFL+
Sbjct: 169 LELILECKNSGLKVAVASSADRIKVDANLAAAGLSVFLFDAIVSADAFEKLKPAPDIFLA 228

Query: 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290
           ASK L V T+ECIVIEDALAGVQAA AA+MRCIAVTTTL E  L++ SPS IRK IG +S
Sbjct: 229 ASKSLGVDTNECIVIEDALAGVQAANAAEMRCIAVTTTLEEIALRQGSPSFIRKNIGDIS 288

Query: 291 LNDILTGGGGSYNEKIQEHELLHAASQNSTAL---LKEKTDNWSILDTGAADEKG---SS 344
           +NDIL GG  +       H     +++NS+++   L E  +  +    G +D KG   S 
Sbjct: 289 INDILYGGSNA------RHNEGAGSTENSSSVGNALSESLNGATA--AGHSDTKGFPISK 340

Query: 345 TSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGG 404
             GL GSRREILRYGSLG+A SCLF AV NWKAMQ+ASPK + N L G N   F + EG 
Sbjct: 341 NKGLLGSRREILRYGSLGIALSCLFVAVRNWKAMQFASPKGLLNFLMGGNSSVFARNEGK 400

Query: 405 SSQSERIQQFVNYISDVEN 423
            S+  RI  F  +I  +++
Sbjct: 401 KSRCRRI--FTGFIVAIQS 417


>gi|224052833|ref|XP_002198291.1| PREDICTED: NHL repeat-containing protein 2 [Taeniopygia guttata]
          Length = 727

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 285/702 (40%), Positives = 390/702 (55%), Gaps = 70/702 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYC 464
            +  E+      Y+  +++R+    VPE    L WLNT  P+   +DL GKVVVLDF+TYC
Sbjct: 25   TAQEKENLVYQYVKKMDSRERDLAVPELGGDLQWLNTEGPISLHKDLCGKVVVLDFFTYC 84

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE +Y D     +VGVHSAKF NEK L+ I++AVLRY I HPVVND 
Sbjct: 85   CINCLHLLPDLHALEHQYSDKDGLVIVGVHSAKFPNEKVLDNIKSAVLRYNIVHPVVNDA 144

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D  LW EL V+ WPT  ++GP G +L  L GEGHR+ L       L FY ++  + +  +
Sbjct: 145  DATLWHELEVSCWPTLVILGPRGNMLFSLVGEGHREKLFLFTSITLKFYKERGQIKDNNI 204

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+A+D    RL I+D+ H+RI+VT  +G  +  IG    
Sbjct: 205  GIKLYKDSLP---PSPLLFPGKVAVDDSGGRLVIADTGHHRILVTRKNGQILHTIGGP-N 260

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G RDG F +A FN PQG+A   K N++YVADTENH +R+ID     V T+AG G +G D
Sbjct: 261  SGRRDGRFSEAAFNSPQGIAI--KNNVIYVADTENHLIRKIDLELQMVTTVAGIGVQGVD 318

Query: 704  YQGGEKGTSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIWE-----------HSTV 746
             +GG KG  Q ++SPWDV +         ++ ++IAMAG HQIW                
Sbjct: 319  KEGGAKGEEQPISSPWDVVFGSSISGTQEDDVLWIAMAGIHQIWALMLEGGKLPKGSDLK 378

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             GV   F+G G E N N +      FAQPSG+SL+P+  +  ++VADSESS++R ++LK 
Sbjct: 379  KGVCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLAPEEPWSCLFVADSESSTVRTISLKD 438

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG G    LQHPLGV   K  Q +YVADSYNHKIK
Sbjct: 439  GAVKHLVGGERDPL---NLFAFGDVDGAGINAKLQHPLGVTWDKKRQLLYVADSYNHKIK 495

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGNL-FIADTNNNIIRYLD 919
             +DP     +TLAG G+AG   G++   +  +EP G+   +NG L ++ADTNN+ I+ LD
Sbjct: 496  VVDPKMKNCATLAGTGEAGNVVGSSFTQSAFNEPGGLCVEENGRLMYVADTNNHQIKVLD 555

Query: 920  LNKE--------EPE---------LQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVD 962
            L  +        +P+         +Q  ++  + P  PKS    +L   +    QTI   
Sbjct: 556  LETKILSMLPILKPDACDVPDNLPVQKDKITNL-PRLPKSAPNVKLPSLTVAPGQTI--- 611

Query: 963  GGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVII--DPLDGNLSPEGS-AVLH 1019
                      LK++LP +   ++EA S + +  E  N  ++    L G +    S  V+ 
Sbjct: 612  -------QFLLKLNLPLDSKLNEEAPSAWFITAEDNNTWLLQGQCLTGEIKDISSQTVIP 664

Query: 1020 FRRMSPSVS---TGRISCKVYYC-KEDEVCLYKPLLFEVPFQ 1057
            F+     VS   T  I   +YYC K    C+   + F  P Q
Sbjct: 665  FQLPGSCVSAEATLAIKACLYYCSKGSSACMMAGVSFSQPLQ 706


>gi|410896258|ref|XP_003961616.1| PREDICTED: NHL repeat-containing protein 2-like [Takifugu rubripes]
          Length = 716

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 281/686 (40%), Positives = 388/686 (56%), Gaps = 47/686 (6%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      ++  ++ R    I P+F   L+W+NT  PL   ++L GKVV+LDF+TYC
Sbjct: 26   TQQEKEDLVYQHLKTLDQRDDLKI-PDFQPGLEWINTEGPLSLNKELAGKVVLLDFFTYC 84

Query: 465  CINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LEKKY  +    VVGVHSAKF NEK L+ IR+AVLRY I HPVVND 
Sbjct: 85   CINCLHILPDLHQLEKKYSAEDGLVVVGVHSAKFPNEKVLDNIRSAVLRYDICHPVVNDS 144

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            +  LW EL V+ WPT   +GP G LL  L GEGHR        AAL +Y ++ LL    +
Sbjct: 145  EACLWHELEVSCWPTLVFLGPRGNLLFSLVGEGHRDKQMLFSAAALRYYKERGLLKTHTV 204

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
            P+ L +D+ P    S L FPGK+AID  N RL I+D+ H+R+++    G  +  IG   E
Sbjct: 205  PIRLFRDSLP---PSILSFPGKIAIDDGNKRLAIADTGHHRVLMVSTTGQLLQVIGGP-E 260

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG   +A+FN PQG+A   K + +YVADTENH +R+ID     V TLAG G +G+D
Sbjct: 261  SGRKDGDLSEASFNSPQGVAI--KGDTVYVADTENHLIRKIDLSAGKVSTLAGTGEQGTD 318

Query: 704  YQGGEKGTSQLLNSPWDVCYKPI----NEKVYIAMAGQHQIWEHSTVD-----------G 748
              GG  G  Q ++SPWDV            ++IAMAG HQIW     D           G
Sbjct: 319  KDGGAPGPEQPISSPWDVTLGTAGGYEGNVLWIAMAGTHQIWALFLEDGKLPKGSESKAG 378

Query: 749  VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGG 806
                ++G G E N N S     SFAQPSG++L+P+  +  +YVADSESS++R L LK G 
Sbjct: 379  TCLRWAGSGSEENRNNSYPHKASFAQPSGLALAPEEPWSCLYVADSESSTVRTLALKDGA 438

Query: 807  SRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
             + L GG  DP+   NLF FGD DG G +  LQHPLGV +  +  ++YVADSYNHKIK +
Sbjct: 439  VKSLVGGERDPM---NLFAFGDVDGKGVDAKLQHPLGVAWAPQQSRLYVADSYNHKIKVV 495

Query: 864  DPASNRVSTLAGIGKAGFKDGAALAAQL-SEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP + + STLAG G+AG   G A    L +EPAGI     G  L++ADTNN+ ++ LDL+
Sbjct: 496  DPKAKQCSTLAGTGEAGDAFGPAFHQSLFNEPAGICVGSGGKLLYVADTNNHRVKVLDLD 555

Query: 922  KE--EPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPE 979
                 P   +++     P  P +++P   +  +  +   + V  G +    + L ++LP 
Sbjct: 556  SRTVSPFPISVDCTDSAPSGP-AKAPALPKSATRIEMPPVEVSAGQTLV--MLLSLTLPH 612

Query: 980  EYHFSKEARSKFSVDVEPENAVIIDP-LDGNLSPEGSAVLHFRRM------SPSVSTGRI 1032
                + EA S +++  E    ++  P + GN+      +    R+      S  V    +
Sbjct: 613  GTKLTAEAPSFWALTAEGCEWLLDSPTVTGNVMDLSKPLTISTRLPVPIKDSTDVPGLTL 672

Query: 1033 SCKVYYCKE-DEVCLYKPLLFEVPFQ 1057
            S  +YYCKE D  C+ K   F+ P +
Sbjct: 673  SVWLYYCKETDHTCMMKAASFKQPLR 698


>gi|126273410|ref|XP_001377730.1| PREDICTED: NHL repeat-containing protein 2 [Monodelphis domestica]
          Length = 777

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/698 (39%), Positives = 401/698 (57%), Gaps = 64/698 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYC 464
            +  E+      Y+  V+  +    +PEFP  L+WLNT   +   +DL GKVVVLDF+TYC
Sbjct: 80   TAQEKDNLVYQYLQKVDGWEQDLAMPEFPEGLEWLNTEGSISIYKDLCGKVVVLDFFTYC 139

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE KY D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 140  CINCIHLLPDLNALEHKYTDKDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDT 199

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D  LW++L V+ WPT  ++GP G +L  L GEGH++ L      AL FY +K  + +  +
Sbjct: 200  DAILWQDLEVSCWPTLVILGPRGNILFSLVGEGHKEKLFLFTSVALKFYKEKGQIKDNKI 259

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L +D+ P    SPL FPGK+ +D L++RL I+D+ H+RI+V   +G     IG    
Sbjct: 260  GIKLYRDSLP---PSPLLFPGKVTVDNLSDRLVIADTGHHRILVVRKNGQIQHSIGGP-N 315

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG+F ++TFN PQG++   K N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 316  SGSKDGTFLESTFNSPQGVS--IKNNIIYVADTENHLIRKIDLETEMVSTVAGIGIQGTD 373

Query: 704  YQGGEKGTSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +         N+ ++IAMAG HQIW           +   +
Sbjct: 374  KEGGAKGEEQPISSPWDVVFGTSGSQVQQNDVLWIAMAGIHQIWALMLEDGKLLKKSDLI 433

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G   +F+G G E N N +     SFAQPSG+S++ +  +  ++VADSESS++R ++LK 
Sbjct: 434  KGTCLSFAGSGNEENRNNAYPHKASFAQPSGLSVASEEPWNCLFVADSESSTVRTVSLKD 493

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 494  GAVKHLVGGERD-PMNLFAFGDVDGAGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVV 552

Query: 864  DPASNRVSTLAGIGKAG-FKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +T+AG G+A       +  +  +EP G+   +NGN L+IADTNN+ I+ +DL 
Sbjct: 553  DPKTKNCTTIAGTGEASNIISSTSTESTFNEPGGLCIGENGNLLYIADTNNHQIKVMDLE 612

Query: 922  KEEPELQTL---ELKGVQPPTPKSRSPKRLRR--RSSPDAQT--IVVDGGLSNEGNIYLK 974
             +   + ++   E   V  P  + +   +L +  +SSP+ +   + V  G S +  + L+
Sbjct: 613  TKIISVLSIINSETAVVDGPFLEKQKTIKLPKLPKSSPNVKLSPLTVSPGQSLQ--LILR 670

Query: 975  ISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMS--PSVSTG-- 1030
            + LP E   ++ A S + +  E    +    L+G  +P G      R +S  P +S    
Sbjct: 671  LDLPAETKLTEGAPSFWFLTAEGNEWL----LEGQ-TPSG----EIRSLSTQPVISLKIP 721

Query: 1031 ----------RISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                       I   +YYC  D   C+ K +LF  P Q
Sbjct: 722  HSCLSFEVIVSICVCLYYCSSDSSACMMKGILFSQPLQ 759


>gi|72094692|ref|XP_795849.1| PREDICTED: NHL repeat-containing protein 2-like [Strongylocentrotus
            purpuratus]
          Length = 706

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 275/670 (41%), Positives = 387/670 (57%), Gaps = 46/670 (6%)

Query: 432  EFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTV 489
            E PA L+W NT+ PL F+ +L+GK+VVLDF+TYCCINCMH+LPDLE LE+KY  +    V
Sbjct: 44   EIPAGLEWFNTSGPLSFKSNLQGKLVVLDFFTYCCINCMHILPDLEALEEKYSVEDGVVV 103

Query: 490  VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
            VGVHSAKF+NEK    I+NA+LRY I HPVVND D  +W +L +  WPT  +VGP+G+ +
Sbjct: 104  VGVHSAKFENEKVSANIKNAILRYNIHHPVVNDPDAVMWNDLNIQCWPTLLIVGPSGEPI 163

Query: 550  AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
              + GEGHR  L ++V+ +L  +  K  L    LP+   KD+   L  SPL +PGK+  +
Sbjct: 164  LSIIGEGHRDILFEVVQLSLDHFKSK--LSPHSLPVVDLKDS---LVDSPLLYPGKVTTN 218

Query: 610  ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG-EEGLRDGSFDDATFNRPQGLAYNAKK 668
                 L +SD+ HNR+++  LDG  +VQ    G E G  DG + +A F+ PQGL +   +
Sbjct: 219  PEGTLLAVSDTGHNRVIIVALDG--VVQHCIGGPETGFNDGLYREARFHSPQGLCW--AQ 274

Query: 669  NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728
            +++YVADTENHA+R+ID     V T+AG G +G D+ G  +GT Q+++SPWDV   P NE
Sbjct: 275  DVIYVADTENHAIRKIDLKEQCVTTIAGTGEQGVDWYGAGRGTEQVISSPWDVVLGPPNE 334

Query: 729  KV-YIAMAGQHQIWEHSTVD-----------GVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
             V +IAMAG HQ+W     D           G+   ++G G E N N S      FAQPS
Sbjct: 335  DVLFIAMAGTHQLWGLFLSDGHWLKAVSHDAGICMNYAGSGKEENRNNSYPRKAGFAQPS 394

Query: 777  GISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
            G++L+P   F  ++VADSESSSIR ++ K G  + + GG+ + P NLF +GD DG G E 
Sbjct: 395  GLALAPQEPFNCMFVADSESSSIRRVSFKDGAVKNVVGGE-MDPMNLFAYGDSDGKGLEA 453

Query: 835  LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK--AGFKDGAALAAQLS 892
             LQHPLGV    +  ++VADSYNHKIK +DP     +T AG G+   G  D   L AQ +
Sbjct: 454  KLQHPLGVAWDHSKLLFVADSYNHKIKMIDPEERYCATYAGTGEPGKGGDDEHILKAQFN 513

Query: 893  EPAGIIEAQNG-NLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTP----KSRSPKR 947
            EP G+  +  G  +++ADTNN+ IR +D+          ELK V PP      K  +PK+
Sbjct: 514  EPGGLAISPCGCKIYVADTNNHTIRCIDIKTS----TVTELKVVLPPVTSVDSKPSAPKK 569

Query: 948  LRRRSSPDAQTIVVDG---GLSNEGNIYLKISLPEEYHFSKEARSKFSVDV---EPENAV 1001
            ++      A    V+G   GL     + L +SLP E + ++ A S + + +   EP++ +
Sbjct: 570  VKTMLPKHASPTTVEGLSVGLDGSVTLVLDVSLPPESYLTEGAPSAWQIFIPGSEPQSVM 629

Query: 1002 IIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPF--QEE 1059
             I  L+   +P  S        +    T ++   +YYC    VC  + L + VP   QE 
Sbjct: 630  SITRLESLSNPLPSYTWTPPPDTQLPVTLQVESTLYYCLTSGVCKRQVLGYSVPVTRQEG 689

Query: 1060 VPNSPPAEIT 1069
             P     E++
Sbjct: 690  APQDVKVELS 699


>gi|414866496|tpg|DAA45053.1| TPA: hypothetical protein ZEAMMB73_628261 [Zea mays]
          Length = 415

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/358 (66%), Positives = 270/358 (75%), Gaps = 14/358 (3%)

Query: 51  GRRMVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV 110
           GRR VV A            +  + WGKVSAVLFDMDGVLCNSEEPSR+A VDVFAEMGV
Sbjct: 49  GRRDVVAAAAASAPSPSSPGTEVAVWGKVSAVLFDMDGVLCNSEEPSRQAGVDVFAEMGV 108

Query: 111 EVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGA 170
           EV V+DF+PFMGTGEANFLGGVA  KGVK F+ E+AKKRFFEIYLDKYAKPNSGIGFPGA
Sbjct: 109 EVAVDDFVPFMGTGEANFLGGVARAKGVKDFNPESAKKRFFEIYLDKYAKPNSGIGFPGA 168

Query: 171 LELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230
           LELI +CK+ GLKVAVASSADRIKVDANLAAAGL V +FDAIVSADAFE LKPAPDIFL+
Sbjct: 169 LELILECKNSGLKVAVASSADRIKVDANLAAAGLSVFLFDAIVSADAFEKLKPAPDIFLA 228

Query: 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290
           ASK L V T+ECIVIEDALAGVQAA AA+MRCIAVTTTL E  L++ SPS IRK IG +S
Sbjct: 229 ASKSLGVDTNECIVIEDALAGVQAANAAEMRCIAVTTTLEEIALRQGSPSFIRKNIGDIS 288

Query: 291 LNDILTGGGGSYNEKIQEHELLHAASQNSTAL---LKEKTDNWSILDTGAADEKG---SS 344
           +NDIL GG  +       H     +++NS+++   L E  +  +    G +D KG   S 
Sbjct: 289 INDILYGGSNA------RHNEGAGSTENSSSVGNALSESLNGATA--AGHSDTKGFPISK 340

Query: 345 TSGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTE 402
             GL GSRREILRYGSLG+A SCLF AV NWKAMQ+ASPK + N L G N   F + E
Sbjct: 341 NKGLLGSRREILRYGSLGIALSCLFVAVRNWKAMQFASPKGLLNFLMGGNSSVFARNE 398


>gi|57107627|ref|XP_544027.1| PREDICTED: NHL repeat-containing protein 2 isoform 1 [Canis lupus
            familiaris]
          Length = 726

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 278/712 (39%), Positives = 389/712 (54%), Gaps = 60/712 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  PL   +DL GKVV+LDF+TYC
Sbjct: 30   TQEEKDSLVYQYLQKVDGWEQDLAVPEFPEGLEWLNTEEPLSVYKDLCGKVVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHTLEHTYSDEDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D ++NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  EIKLYKDSLP---PSPLLFPGKVTVDHVSNRLVIADTGHHRILVVWKNGQIQYIIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A   + N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--RNNIIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG  G  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAPGEEQPISSPWDVVFGMSGSEVGGDDILWIAMAGTHQIWALLLDCGRLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+P+  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLAPEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGVNARLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G A     ++   +  +EP G+    NG  L++ADTNN+ I+ +D
Sbjct: 501  AVDPKTKNCTTLAGTGDASNVITSSFTESTFNEPGGLCVGDNGQLLYVADTNNHQIKVMD 560

Query: 920  LNKEEPELQ--------------TLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +   +                +E +   P  PKS    RL   ++   QT+     L
Sbjct: 561  LETKTISVLPVSRPDNAVVDGPFLVEKQKTLPKLPKSAPNIRLSPVAASPGQTLQFKLRL 620

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSP 1025
                   L   +P  +  + E          P   +       ++S + +  L       
Sbjct: 621  DLPSGTKLTEGVPSCWFLTAEGNEWLLQGQIPSGEI------ESISSQPAISLQIPGDCL 674

Query: 1026 SV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQEEVPNSPPAEITLPYDLK 1075
            S+ +   IS  +YYC  D   C+ K +LF  P Q     S   E T P +LK
Sbjct: 675  SLEAVISISVFLYYCSADSSACMMKGILFSQPLQI---TSTHQECTAPVELK 723


>gi|426253136|ref|XP_004020256.1| PREDICTED: NHL repeat-containing protein 2 [Ovis aries]
          Length = 726

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 280/695 (40%), Positives = 394/695 (56%), Gaps = 59/695 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GKVVVLDF+TYC
Sbjct: 30   TQEEKDGLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKVVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ +R+AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVLDNLRSAVLRYNITHPVVNDV 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+++L      AL +Y  +  +    +
Sbjct: 150  DASLWQELEVSCWPTLIILGPRGNMLFSLIGEGHKENLFLYTSIALKYYKDRGQIRANKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+A+D ++NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKIAVDHVSNRLVIADTGHHRILVVWKNGQTQHSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F +++FN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESSFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGDEQPISSPWDVVFGRSGSEVQRDNILWIAMAGTHQIWALLLDCGRLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++RA++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLAAEDPWSCLFVADSESSTVRAVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  R L GG+   P NLF FGD DG+G +  LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVRPLVGGERD-PTNLFAFGDVDGVGIDARLQHPLGVTWDKKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G A    G++   +  +EP G+   +NG  L++ADTNN+ I+ LDL 
Sbjct: 503  DPKTKNCTTLAGTGNASNIIGSSFTDSTFNEPGGLCIGENGQLLYVADTNNHQIKVLDLE 562

Query: 922  KEE----PELQTLELKGVQPPTPKSRSPKRLRR--RSSPDAQTIVVDGGLSNEGNIYLKI 975
             +     P  ++ E   V  P+  +  PK L +  +S+P  +   V           L++
Sbjct: 563  TKTVSVFPVFRS-ENAVVDGPS-LAEKPKTLPKLPKSAPGIRLSPVAASPGQTLQFKLRL 620

Query: 976  SLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTG----- 1030
             LP     ++ A S + +  E    +    L G + P G   +      P++S       
Sbjct: 621  DLPSGTKLTEGASSCWFLSAEGNEWL----LQGQI-PSGE--IESISNQPTISLQIPGDC 673

Query: 1031 -------RISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                    IS  +YYC  D   C+ K +LF  P Q
Sbjct: 674  LSLEAVLSISVFLYYCSADSSACMMKGVLFSQPLQ 708


>gi|118486065|gb|ABK94876.1| unknown [Populus trichocarpa]
          Length = 308

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/283 (80%), Positives = 248/283 (87%), Gaps = 1/283 (0%)

Query: 21  LFFFSPNTKQLRPSSVSSALFQCGAKRTVLGRRMVVKACVTKVEETDVNVSSESKWGKVS 80
           LFFF+ N K  +P S    LFQ  +K  V  ++M VKACV KVE+      + ++WGKVS
Sbjct: 26  LFFFTSNPKGSKPISSLVQLFQRRSKNLVFNKKMEVKACV-KVEQKSETEVTGNEWGKVS 84

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AVLFDMDGVLCNSEEPSR A VDVFAEMGVEVTV+DF+PFMGTGEANFLGGVA+VKGVKG
Sbjct: 85  AVLFDMDGVLCNSEEPSRMAGVDVFAEMGVEVTVDDFVPFMGTGEANFLGGVANVKGVKG 144

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
           FD+E AKKRFFEIYLDKYAKPNSGIGF GALELI QCK+KGLKVAVASSADRIKVDANLA
Sbjct: 145 FDTEMAKKRFFEIYLDKYAKPNSGIGFLGALELITQCKNKGLKVAVASSADRIKVDANLA 204

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
           AAGLPVSMFDAIVSADAFENLKPAPDIFL+ASKIL VPTSECIVIEDALAGVQAAKAAQM
Sbjct: 205 AAGLPVSMFDAIVSADAFENLKPAPDIFLAASKILGVPTSECIVIEDALAGVQAAKAAQM 264

Query: 261 RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYN 303
           RCIAVTTTLSEE L +ASPSLIRKEIG++SL+DIL GG G Y+
Sbjct: 265 RCIAVTTTLSEEILNDASPSLIRKEIGNISLDDILDGGSGGYS 307


>gi|139949007|ref|NP_001077192.1| NHL repeat-containing protein 2 [Bos taurus]
 gi|166233893|sp|A4IF69.1|NHLC2_BOVIN RecName: Full=NHL repeat-containing protein 2
 gi|134025213|gb|AAI34431.1| NHLRC2 protein [Bos taurus]
 gi|296472617|tpg|DAA14732.1| TPA: NHL repeat-containing protein 2 [Bos taurus]
          Length = 726

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 277/695 (39%), Positives = 390/695 (56%), Gaps = 59/695 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +   +VPEFP  L+WLNT  P+   +DL GKVV+LDF+TYC
Sbjct: 30   TQEEKDGLVYQYLQKVDGWEQDLLVPEFPEGLEWLNTEEPISVYKDLCGKVVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ IR+AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVLDNIRSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH++ L      AL +Y  +  +    +
Sbjct: 150  DASLWQELEVSCWPTLIILGPRGNMLFSLIGEGHKEKLFLYTSIALKYYKDRGQIRANKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D ++NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKITVDHVSNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F +++FN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESSFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGDEQPISSPWDVVFGRSGPEVQRDNILWIAMAGTHQIWALLLDCGRLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEGPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGERD-PMNLFAFGDVDGVGINARLQHPLGVTWDQKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G A    G++   +  +EP G+   +NG  L++ADTNN+ I+ LDL 
Sbjct: 503  DPKTKNCTTLAGTGNASNMIGSSFTDSTFNEPGGLCIGENGQLLYVADTNNHQIKVLDLE 562

Query: 922  KEE----PELQTLELKGVQPPTPKSRSPKRLRR--RSSPDAQTIVVDGGLSNEGNIYLKI 975
             +     P  ++ E   V  P    + PK L +  +S+P  +   V           L++
Sbjct: 563  TKTVSVFPVFRS-ENAVVDGPCLAGK-PKTLPKLPKSAPGIRLAPVAASPGQTLQFKLRL 620

Query: 976  SLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTG----- 1030
             LP     ++ A S + +  E    +    L G + P G   +      P++S       
Sbjct: 621  DLPSGTKLTEGASSCWFLSAEGNEWL----LQGQI-PSGE--IESISNQPTISLQIPGDC 673

Query: 1031 -------RISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                    IS  +YYC  D   C+ K +LF  P Q
Sbjct: 674  LSLEAILSISVFLYYCSSDSSACMMKGILFSQPLQ 708


>gi|417404183|gb|JAA48864.1| Putative nhl repeat-containing protein 2 [Desmodus rotundus]
          Length = 725

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 278/703 (39%), Positives = 384/703 (54%), Gaps = 76/703 (10%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL+GKVVVLDF+TYC
Sbjct: 30   TQEEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEGPISVYKDLRGKVVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ IR+AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVLDNIRSAVLRYDITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLLLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD  P    SPL FPGK+ +D ++ RL I+D+ H+RI+V   +G     IG   +
Sbjct: 210  GIKLYKDTLP---PSPLLFPGKVTVDHVSKRLVIADTGHHRILVVWKNGQIQYSIGGP-D 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +   + +V      ++AMAG HQIW           +    
Sbjct: 324  KEGGAKGEEQPISSPWDVVWGSSDSEVQRDDILWVAMAGTHQIWALLLDCGRLPKKSELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWNCLFVADSESSTVRMVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKPLVGGERDPM---NLFAFGDTDGVGISAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
             +DP +    TLAG G A     +   +  +EP G+   +NG  L+IADTNN+ I+ +DL
Sbjct: 501  VVDPKTKNCITLAGTGDASNVSSSFTQSTFNEPGGLCIGENGQLLYIADTNNHQIKVMDL 560

Query: 921  NKEEPELQTL--------------ELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLS 966
              +   +  +              E +   P  PKS    RL   ++   QT+     L 
Sbjct: 561  ETKTVSVLPVFKAGNAVVDGPSPGENQKTVPELPKSAPSIRLAPAAASPGQTLQFKLRLD 620

Query: 967  NEGNIYLKISLPEEYHFSKEARSKF-----------SVDVEPENAVIIDPLDGNLSPEGS 1015
                  L   +P  +  + E                S+  +P  ++ I P D  LSPE  
Sbjct: 621  FPPGTKLTEGVPSCWFLTAEDNEWLLQGQVPSGEIESISNQPTISLRI-PAD-CLSPE-- 676

Query: 1016 AVLHFRRMSPSVSTGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            AV+  R              +YYC  D   C+ K +LF  P Q
Sbjct: 677  AVVSVRVF------------LYYCSADSSACMMKGVLFRQPLQ 707


>gi|343780954|ref|NP_001230490.1| NHL repeat-containing protein 2 [Sus scrofa]
          Length = 725

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 279/717 (38%), Positives = 400/717 (55%), Gaps = 71/717 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT   +   +DL GKVVVLDF+TYC
Sbjct: 30   TQEEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEESISIYKDLCGKVVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            + +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  EASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIKDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+   L  SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDS---LTPSPLLFPGKVTVDHVTNRLVIADTGHHRILVVWKNGQIQYTIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A   + N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVA--IRNNIIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCY------KPINEKVYIAMAGQHQIW-----------EHSTV 746
             +GG  G  Q ++SPWDV +       P ++ ++IAMAG HQIW           ++   
Sbjct: 324  KEGGANGEEQPISSPWDVVFGRSGSEAPGDDILWIAMAGTHQIWALLLDCGRLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+S++ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSVASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGER-DPMNLFAFGDVDGVGINAKLQHPLGVTWDEKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G AG   G++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKSCTTLAGTGDAGDTIGSSFTKSTFNEPGGLCIGENGQLLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT---------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNE 968
             +     P  ++         L  K   P  PKS    RL   ++   QT+         
Sbjct: 563  TKTVSVLPVFRSESAVVDGPILAEKRTLPKLPKSAPGIRLSPVAASPGQTL--------- 613

Query: 969  GNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNL-SPEGSAVLHFRRMSPSV 1027
                L++ LP     ++ A S + +  E    +    L G + S E  ++ +   +S  +
Sbjct: 614  -QFKLRLDLPSGTKLTEGAPSCWFLSAEGNEWL----LQGQIPSGEIESISNQPTISLQI 668

Query: 1028 STGRISCKV--------YYCKED-EVCLYKPLLFEVPFQEEVPNSPPAEITLPYDLK 1075
                +S +V        YYC  D   C+ K +LF  P Q  + N+  + I  P +LK
Sbjct: 669  PGDCVSLEVVLSISVFLYYCSTDSSACMMKGILFSQPLQ--ITNTQQSYIA-PVELK 722


>gi|57529823|ref|NP_001006504.1| NHL repeat-containing protein 2 [Gallus gallus]
 gi|82081010|sp|Q5ZI67.1|NHLC2_CHICK RecName: Full=NHL repeat-containing protein 2
 gi|53136494|emb|CAG32576.1| hypothetical protein RCJMB04_29n5 [Gallus gallus]
          Length = 727

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 276/698 (39%), Positives = 388/698 (55%), Gaps = 68/698 (9%)

Query: 409  ERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCIN 467
            E+      Y+  +++R+    VPE    L WLNT  P+   +DL GKVVVLDF+TYCCIN
Sbjct: 28   EKENLVYQYLKKMDSRERDLTVPELSRDLQWLNTEGPISLHKDLCGKVVVLDFFTYCCIN 87

Query: 468  CMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMN 526
            C+H+LPDL  LE +Y D     ++GVHSAKF NEK L++I++AVLRY I HPVVND D  
Sbjct: 88   CLHLLPDLHELEHQYSDKDGLVIIGVHSAKFPNEKVLDSIKSAVLRYNIVHPVVNDADAT 147

Query: 527  LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
            LW EL V+ WPT  ++GP G +L  L GEGH++ L       L FY ++  + +  + + 
Sbjct: 148  LWHELEVSCWPTLVILGPRGNMLFSLVGEGHKEKLFLFTSITLKFYKERGQIKDNSIGIK 207

Query: 587  LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL 646
            L KD+ P    SPL FPGK+ +D    RL I+D+ H+RI+VT  +G  +  IG     G 
Sbjct: 208  LYKDSLP---PSPLLFPGKVTVDKSGERLVIADTGHHRILVTLKNGQILHTIGGP-NSGR 263

Query: 647  RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG 706
            +DG F +A FN PQG+A   K N++YVADTENH +R+ID   + V T+AG G +G D +G
Sbjct: 264  KDGRFSEAAFNSPQGVAI--KNNVIYVADTENHLIRKIDLELEIVTTVAGIGIQGVDKEG 321

Query: 707  GEKGTSQLLNSPWDVCY------KPINEKVYIAMAGQHQIWE-----------HSTVDGV 749
            G KG  Q ++SPWDV +         ++ ++IAMAG HQ+W                 GV
Sbjct: 322  GAKGEEQPISSPWDVVFGNSVSGTQEDDVLWIAMAGIHQVWALMLEGGKLPKGSDLKKGV 381

Query: 750  TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGS 807
               F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK G  
Sbjct: 382  CLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEEPWNCLFVADSESSTVRMISLKDGAV 441

Query: 808  RLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLD 864
            + L GG  DP+   NLF FGD DG G    LQHPLG+ +  K   +YVADSYNHKIK +D
Sbjct: 442  KHLVGGERDPL---NLFAFGDVDGAGINAKLQHPLGITWDKKRKLLYVADSYNHKIKVVD 498

Query: 865  PASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGNL-FIADTNNNIIRYLDLNK 922
            P     +TLAG G+A    G++   +  +EP G+   +NG L ++ADTNN+ I+ LDL  
Sbjct: 499  PKMKNCATLAGTGEASNVVGSSFTQSTFNEPGGLCIEENGRLVYVADTNNHQIKVLDLET 558

Query: 923  E--------EPE----LQTLELKGVQ----PPTPKSRSPKRLRRRSSPDAQTIVVDGGLS 966
            +         PE       L ++  Q    P  PKS    +L   S+   QTI       
Sbjct: 559  KILSMLPILNPETCDVTDNLSVQKDQIANLPKLPKSAPNIQLPSLSAAPGQTI------- 611

Query: 967  NEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVII--DPLDG---NLSPEGSAVLHFR 1021
                  LK++LP +   ++EA + + +  E  N  ++    L G   ++S +        
Sbjct: 612  ---QFLLKLTLPPDSKLNEEAPNAWFITAEDNNTWLLQGQCLSGEIKDVSCQTVIPFQLP 668

Query: 1022 RMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            R+  S  +   I   +YYC +D   C+ K + F  P Q
Sbjct: 669  RVCLSAEAVLAIKACLYYCSKDSSACMMKGISFNQPLQ 706


>gi|149689662|ref|XP_001495693.1| PREDICTED: NHL repeat-containing protein 2 [Equus caballus]
          Length = 726

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 273/696 (39%), Positives = 390/696 (56%), Gaps = 61/696 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +   +VPEFP  L+WLNT  P+   +DL GKVVV DF++YC
Sbjct: 30   TQEEKDSLVYQYLQKVDGWEQDLLVPEFPEGLEWLNTEEPISVYKDLSGKVVVFDFFSYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L++I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVLDSIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIKDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDRVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG+F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGTFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG +G  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAEGEQQPISSPWDVVFGTSGSEVQRDDILWIAMAGTHQIWALLLDSGRLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+S++ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSVASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   +LF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---DLFAFGDVDGVGINAKLQHPLGVTWDKKRNLVYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G A     ++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKTCTTLAGTGDASNVISSSFTQSTFNEPGGLCIGENGQLLYVADTNNHQIKVMD 560

Query: 920  LNKEEPE---LQTLELKGVQPPTPKSRSPKRLRR--RSSPDAQTIVVDGGLSNEGNIYLK 974
            L  +      L T E   V  P P+ +  K L R  +S+P  +   V           L+
Sbjct: 561  LETKMISVLPLFTSENTVVDGPFPEEKQ-KTLPRLPKSAPAVKLSPVAASPGQTLQFKLR 619

Query: 975  ISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTG---- 1030
            + LP     ++ A S + +  E    +    L G + P G   +      P++S      
Sbjct: 620  LDLPSGAKLTEGAPSCWFLTAEGNEWL----LQGQI-PSGE--IESISNQPTISLQIPGD 672

Query: 1031 --------RISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                     +S  +YYC  D   C+ K +LF  P Q
Sbjct: 673  CVSLEAVISVSVFLYYCSADSSACMMKGILFSQPLQ 708


>gi|147818279|emb|CAN64724.1| hypothetical protein VITISV_026725 [Vitis vinifera]
          Length = 423

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/458 (54%), Positives = 296/458 (64%), Gaps = 82/458 (17%)

Query: 626  VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
            VVTDL+GN+I+QIGS                                   T    LR+  
Sbjct: 43   VVTDLNGNYILQIGS-----------------------------------TGEEGLRDGS 67

Query: 686  FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
            F + T                         N P  + Y      +Y+A    H + E   
Sbjct: 68   FDDAT------------------------FNRPQGLAYNAKKNLLYVADTENHALREIDF 103

Query: 746  VDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
            V+   +  +G+G                       + D  E+Y+ADSESSSIRAL+LKTG
Sbjct: 104  VNETVQTLAGNG-----------------------TKDLKEVYIADSESSSIRALDLKTG 140

Query: 806  GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
            GSRLLAGGD +F DNLF+FGD DG+GSEVLLQHPLGV C K+GQIYVADSYNHKIKKLDP
Sbjct: 141  GSRLLAGGDTVFSDNLFRFGDHDGVGSEVLLQHPLGVSCGKDGQIYVADSYNHKIKKLDP 200

Query: 866  ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEP 925
            A+ RVSTLAG GKAGFKDG ALAAQLSEP+GI+E +NG LFIADTNN++IRYLDL K+E 
Sbjct: 201  ATGRVSTLAGTGKAGFKDGRALAAQLSEPSGIVEVENGVLFIADTNNSVIRYLDLKKKEA 260

Query: 926  ELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSK 985
            +L TLELKGVQPP PKSRS KRLRRRSS D QTI  DG  SNEGN+Y++IS+PE YHFSK
Sbjct: 261  DLVTLELKGVQPPIPKSRSLKRLRRRSSADTQTITADGTSSNEGNLYIRISVPEGYHFSK 320

Query: 986  EARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVC 1045
            EA+SKFS++ EPE  ++I PLDG LSP G A LHFRR SPS    R++CKVYYCKEDEVC
Sbjct: 321  EAQSKFSIETEPETTMVIAPLDGILSPGGFATLHFRRSSPSAFMARVNCKVYYCKEDEVC 380

Query: 1046 LYKPLLFEVPFQEEVPNSPPAEITLPYDLKPKILTNSL 1083
            LY+ + FEVPF++ +P S PA+I+L Y +KPK  TNSL
Sbjct: 381  LYQSVAFEVPFRDAIPGSSPADISLDYAVKPKTPTNSL 418


>gi|301755504|ref|XP_002913612.1| PREDICTED: NHL repeat-containing protein 2-like [Ailuropoda
            melanoleuca]
 gi|281347739|gb|EFB23323.1| hypothetical protein PANDA_001408 [Ailuropoda melanoleuca]
          Length = 726

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/693 (39%), Positives = 390/693 (56%), Gaps = 55/693 (7%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GKVV+LDF+TYC
Sbjct: 30   TQEEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKVVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D ++NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  EVKLYKDSLP---LSPLLFPGKVTVDHVSNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A   + N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGVFSESTFNSPQGVAI--RNNIIYVADTENHLVRKIDLEAEMVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG +G  Q ++SPWDV +     ++      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAQGEEQPISSPWDVVFGTSGSEIQRDDILWIAMAGTHQIWALLLDSGRLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+PD  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLAPDEPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   STLAG G A     ++   +  +EP G+   ++G  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCSTLAGTGDASNVITSSFTESTFNEPGGLCIGEDGQLLYVADTNNHQIKVMD 560

Query: 920  LNKEEPELQTLELKGVQPPTPK-------SRSPKRLRR--RSSPDAQTIVVDGGLSNEGN 970
            L     E +T+ +  V  P             PK L +  +S+P+ +   V         
Sbjct: 561  L-----ETKTISVLPVFIPDSAVVDGPFLVEKPKTLPKLPKSAPNIRLSPVAASPGQTLQ 615

Query: 971  IYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPL-DGNL-SPEGSAVLHFRRMSPSVS 1028
              L++ LP     ++   S + +  E    ++   +  G + S     V+  +     +S
Sbjct: 616  FKLRLDLPSGTKLTEGVSSCWFLTAEGNEWLLQGQIPSGEIESISSQPVISLQIPGDCLS 675

Query: 1029 TG---RISCKVYYCKEDE-VCLYKPLLFEVPFQ 1057
                  IS  +YYC  D   C+ K ++F  P Q
Sbjct: 676  LEAVISISVFLYYCSADSNACMMKGIVFSQPLQ 708


>gi|332212861|ref|XP_003255539.1| PREDICTED: NHL repeat-containing protein 2 [Nomascus leucogenys]
          Length = 726

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 271/698 (38%), Positives = 386/698 (55%), Gaps = 65/698 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I+NAVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKNAVLRYNITHPMVNDT 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID     V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAGKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKA-GFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G      + +   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCTTLAGTGDTNNVTNSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKVMD 560

Query: 920  LNKEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +     P  ++          +E +   P  PKS    RL   ++   QT+      
Sbjct: 561  LETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL------ 614

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFR 1021
                   L++ LP     ++   S + +  E    ++   +      N+S + +  L   
Sbjct: 615  ----QFKLRLELPSGSKLTEGVPSCWFLTAEGNEWLLQGQIPSGDIENISSQPTISLQIP 670

Query: 1022 RMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                S+ +   IS  +YYC  D   C+ K +LF  P Q
Sbjct: 671  DDCLSLEAIVSISVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|297687408|ref|XP_002821208.1| PREDICTED: NHL repeat-containing protein 2 [Pongo abelii]
          Length = 726

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/696 (38%), Positives = 386/696 (55%), Gaps = 61/696 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVA--IMNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWD+ +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDIVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGERD-PKNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCVGENGQLLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          +E +   P  PKS    RL   ++   QT+        
Sbjct: 563  TKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL-------- 614

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLD----GNLSPEGSAVLHFRRM 1023
                 L++ LP     ++   S + +  E    ++   +      N+S + +  L     
Sbjct: 615  --QFKLRLDLPSGSKLTEGVPSCWFLTAEGNEWLLQGQMPFGDIENISSQPTISLQIPDD 672

Query: 1024 SPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              S+ +   IS  +YYC  D   C+ K +LF  P Q
Sbjct: 673  CLSLEAIVSISVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|345324001|ref|XP_001513492.2| PREDICTED: NHL repeat-containing protein 2-like [Ornithorhynchus
            anatinus]
          Length = 725

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 274/692 (39%), Positives = 387/692 (55%), Gaps = 74/692 (10%)

Query: 416  NYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPD 474
             Y+  V+ R+    VPEF   L+WLNT +P+   +DL GKVVVLDF+TYCCINC+H+LPD
Sbjct: 40   QYLRQVDGRERDLKVPEFAEGLEWLNTESPIYMYKDLSGKVVVLDFFTYCCINCIHLLPD 99

Query: 475  LEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGV 533
            L  LE+K+ D     VVGVHSAKF NEK L+ I++AVLRY I+HPVVND D +LW+ L V
Sbjct: 100  LHALEQKFSDEDGLVVVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDADASLWQALEV 159

Query: 534  NSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDP 593
            + WPT  ++GP G +L  L GEGH++ L      AL +Y  K  + +  + + L +D  P
Sbjct: 160  SCWPTLVILGPRGNMLFSLVGEGHKEKLFLFTSVALKYYKGKGQIKDNKIVIKLYRDFLP 219

Query: 594  RLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDD 653
                SPL FPGK+A+D    RL I+D+ H+RI+V   +G     IG     G +DG+F +
Sbjct: 220  ---PSPLLFPGKVAVDRATGRLVIADTGHHRILVVKKNGQIQYSIGGP-NSGRKDGTFSE 275

Query: 654  ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
            + FN PQG+A   K N++YVADTENH +R+ID   + V T+AG G +G+D +GG KG +Q
Sbjct: 276  SAFNSPQGVAI--KNNIIYVADTENHLIRKIDLEVEQVSTVAGVGVQGTDKEGGAKGEAQ 333

Query: 714  LLNSPWDVCYKPINEK------VYIAMAGQHQIW-----------EHSTVDGVTRAFSGD 756
             ++SPWDV +     +      ++IAMAG HQIW           +     G    F+G 
Sbjct: 334  PISSPWDVAFGTSGSEDNRDYILWIAMAGTHQIWALLLDSGTLPKKSELKKGTCLRFAGS 393

Query: 757  GYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGGD 814
            G E N N +      FAQPSG+SL+    +  +++ADSESS++R ++LK G  + L GG+
Sbjct: 394  GNEENRNNAYPHKAGFAQPSGLSLASGEPWNCLFIADSESSTVRTISLKDGAVKHLVGGE 453

Query: 815  PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTL 873
               P NLF FGD DG G    LQHPLGV   + G  +YVADSYNHKIK +DP +   +TL
Sbjct: 454  RD-PMNLFAFGDIDGAGINAKLQHPLGVTWDEKGNLLYVADSYNHKIKVVDPKTKNCATL 512

Query: 874  AGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPEL---- 927
            AG G+A    G++L     +EP G+   ++G+ L++ADTNN+ I+ LDL  +   +    
Sbjct: 513  AGTGEASNVIGSSLTQTTFNEPGGLCIGEDGHLLYVADTNNHQIKVLDLEAKTVSVFPIL 572

Query: 928  --------QTLELKGVQPPTPKSRSPK-RLRRRSSPDAQTIVVDGGLSNEGNIYLKISLP 978
                    +TLE K  + P     +PK  L   +    QT+             L++ LP
Sbjct: 573  NSETAVDGRTLEKKVAKLPKLPKFAPKIELSPLTVCPGQTL----------RFGLRLVLP 622

Query: 979  EEYHFSKEARSKFSVDVEPENAV------------IIDPLDGNLSPEGSAVLHFRRMSPS 1026
             +   ++EA S + +  E    +            I +P + +L    S V     +S +
Sbjct: 623  AKSKLTEEAASFWYLTAEGNEWLLQGQTPLGEIKDISNPCEISLLIPCSCVSFQVILSVN 682

Query: 1027 VSTGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            V        +YYC  D   C+ K +LF  P Q
Sbjct: 683  VF-------LYYCSVDSSACMMKGILFNQPLQ 707


>gi|114632912|ref|XP_508046.2| PREDICTED: NHL repeat-containing protein 2 [Pan troglodytes]
 gi|410221294|gb|JAA07866.1| NHL repeat containing 2 [Pan troglodytes]
 gi|410252040|gb|JAA13987.1| NHL repeat containing 2 [Pan troglodytes]
 gi|410252042|gb|JAA13988.1| NHL repeat containing 2 [Pan troglodytes]
 gi|410252044|gb|JAA13989.1| NHL repeat containing 2 [Pan troglodytes]
 gi|410252046|gb|JAA13990.1| NHL repeat containing 2 [Pan troglodytes]
 gi|410292446|gb|JAA24823.1| NHL repeat containing 2 [Pan troglodytes]
 gi|410341451|gb|JAA39672.1| NHL repeat containing 2 [Pan troglodytes]
 gi|410341453|gb|JAA39673.1| NHL repeat containing 2 [Pan troglodytes]
          Length = 726

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/696 (38%), Positives = 386/696 (55%), Gaps = 61/696 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEK------VYIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +      ++IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEAQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGERD-PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          +E +   P  PKS    RL   ++   QT+        
Sbjct: 563  TKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL-------- 614

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRM 1023
                 L++ LP     ++   S + +  E    ++   +      N+S + +  L     
Sbjct: 615  --QFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIATGDIENISSQPTISLQIPDD 672

Query: 1024 SPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              S+ +   IS  +YYC  D   C+ K +LF  P Q
Sbjct: 673  CLSLEAIVSISVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|440911916|gb|ELR61535.1| NHL repeat-containing protein 2, partial [Bos grunniens mutus]
          Length = 760

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 279/712 (39%), Positives = 393/712 (55%), Gaps = 75/712 (10%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +   +VPEFP  L+WLNT  P+   +DL GKVV+LDF+TYC
Sbjct: 46   TQEEKDGLVYQYLQKVDGWEQDLLVPEFPEGLEWLNTEEPISVYKDLCGKVVILDFFTYC 105

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ IR+AVLRY I+HPVVND 
Sbjct: 106  CINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVLDNIRSAVLRYNITHPVVNDA 165

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH++ L      AL +Y  +  +    +
Sbjct: 166  DASLWQELEVSCWPTLIILGPRGNMLFSLIGEGHKEKLFLYTSIALKYYKDRGQIRANKI 225

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D ++NRL I+D+ H+RI+V   +G     IG    
Sbjct: 226  GIKLYKDSLP---PSPLLFPGKITVDHVSNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 281

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F +++FN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 282  PGRKDGIFSESSFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTD 339

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 340  KEGGAKGDEQPISSPWDVVFGRSGPEVQRDNILWIAMAGTHQIWALLLDCGRLPKKNELK 399

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 400  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEGPWSCLFVADSESSTVRTVSLKD 459

Query: 805  GGSRLLAGG--DPIFPD---------------NLFKFGDRDGMGSEVLLQHPLGV-YCAK 846
            G  + L GG  DP+F +               NLF FGD DG+G    LQHPLGV +  K
Sbjct: 460  GAVKHLVGGERDPMFCEKILIHAVSFLFKKKKNLFAFGDVDGVGINARLQHPLGVTWDQK 519

Query: 847  NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN- 904
               +YVADSYNHKIK +DP +   +TLAG G A    G++   +  +EP G+   +NG  
Sbjct: 520  RNLLYVADSYNHKIKVVDPKTKNCTTLAGTGNASNMIGSSFTDSTFNEPGGLCIGENGQL 579

Query: 905  LFIADTNNNIIRYLDLNKEE----PELQTLELKGVQPPTPKSRSPKRLRR--RSSPDAQT 958
            L++ADTNN+ I+ LDL  +     P  ++ E   V  P    + PK L +  +S+P  + 
Sbjct: 580  LYVADTNNHQIKVLDLETKTVSVFPVFRS-ENAVVDGPCLAGK-PKTLPKLPKSAPGIRL 637

Query: 959  IVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVL 1018
              V           L++ LP     ++ A S + +  E    +    L G + P G   +
Sbjct: 638  SPVAASPGQTLQFKLRLDLPSGTKLTEGASSCWFLSAEGNEWL----LQGQI-PSGE--I 690

Query: 1019 HFRRMSPSVSTG------------RISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                  P++S               IS  +YYC  D   C+ K +LF  P Q
Sbjct: 691  ESISNQPTISLQIPGDCLSLEAILSISVFLYYCSSDSSACMMKGILFSQPLQ 742


>gi|119569873|gb|EAW49488.1| NHL repeat containing 2, isoform CRA_b [Homo sapiens]
          Length = 726

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/696 (38%), Positives = 386/696 (55%), Gaps = 61/696 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + +RL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTDRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEKVSTIAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGERD-PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          +E +   P  PKS    RL   ++   QT+        
Sbjct: 563  TKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL-------- 614

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRM 1023
                 L++ LP     ++   S + +  E    ++   +      N+S + +  L     
Sbjct: 615  --QFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDD 672

Query: 1024 SPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              S+ +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 673  CLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|426366237|ref|XP_004050167.1| PREDICTED: NHL repeat-containing protein 2 [Gorilla gorilla gorilla]
          Length = 726

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/697 (38%), Positives = 387/697 (55%), Gaps = 63/697 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW++L V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQDLEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--INNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGER-NPMNLFAFGDVDGVGINAKLQHPLGVTWDKKRSLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          +E +   P  PKS    RL   ++   QT+        
Sbjct: 563  TKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL-------- 614

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEP-----ENAVIIDPLDGNLSPEGSAVLHFRR 1022
                 L++ LP     ++   S + +  E      +  +    +D N+S + +  L    
Sbjct: 615  --QFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIATGDID-NISSQPTISLQIPD 671

Query: 1023 MSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
               S+ +   IS  +YYC  D   C+ K +LF  P Q
Sbjct: 672  DCLSLEAIVSISVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|42476013|ref|NP_940916.2| NHL repeat-containing protein 2 [Homo sapiens]
 gi|74762548|sp|Q8NBF2.1|NHLC2_HUMAN RecName: Full=NHL repeat-containing protein 2
 gi|21748831|dbj|BAC03493.1| unnamed protein product [Homo sapiens]
          Length = 726

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/696 (38%), Positives = 386/696 (55%), Gaps = 61/696 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + +RL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTDRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGERD-PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          +E +   P  PKS    RL   ++   QT+        
Sbjct: 563  TKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL-------- 614

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRM 1023
                 L++ LP     ++   S + +  E    ++   +      N+S + +  L     
Sbjct: 615  --QFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDD 672

Query: 1024 SPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              S+ +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 673  CLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|380812570|gb|AFE78159.1| NHL repeat-containing protein 2 [Macaca mulatta]
          Length = 726

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/698 (38%), Positives = 387/698 (55%), Gaps = 65/698 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+V+LDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDDKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAERVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R+++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRSISLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKIMD 560

Query: 920  LNKEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +     P  ++          +E +   P  PKS    RL   +    QT+      
Sbjct: 561  LETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVAVCAGQTL------ 614

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFR 1021
                   L++ LP     ++   S + +  E    ++   +      N+S + +  L   
Sbjct: 615  ----QFQLRLDLPSGSKLTEGVPSCWFLRAEGNEWLLQGQMPSGDIENISSQPTISLQIP 670

Query: 1022 RMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                S+ +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 671  DDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|383418201|gb|AFH32314.1| NHL repeat-containing protein 2 [Macaca mulatta]
          Length = 726

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/698 (38%), Positives = 387/698 (55%), Gaps = 65/698 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+V+LDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDDKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAERVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R+++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRSVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKIMD 560

Query: 920  LNKEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +     P  ++          +E +   P  PKS    RL   +    QT+      
Sbjct: 561  LETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVAVCAGQTL------ 614

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFR 1021
                   L++ LP     ++   S + +  E    ++   +      N+S + +  L   
Sbjct: 615  ----QFQLRLDLPSGSKLTEGVPSCWFLRAEGNEWLLQGQMPSGDIENISSQPTISLQIP 670

Query: 1022 RMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                S+ +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 671  DDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|326923951|ref|XP_003208196.1| PREDICTED: NHL repeat-containing protein 2-like [Meleagris gallopavo]
          Length = 727

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 275/699 (39%), Positives = 387/699 (55%), Gaps = 70/699 (10%)

Query: 409  ERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCIN 467
            E+      Y+  +++R+    VPE    L WLNT  P+   +DL GKVVVLDF+TYCCIN
Sbjct: 28   EKENLVYQYLKKMDSRERDLTVPELGGDLQWLNTEGPISLHKDLCGKVVVLDFFTYCCIN 87

Query: 468  CMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMN 526
            C+H+LPDL  LE +Y D     ++GVHSAKF NEK L++I++AVLRY I HPVVND D  
Sbjct: 88   CLHLLPDLHELENQYSDKDGLVIIGVHSAKFPNEKALDSIKSAVLRYDIVHPVVNDADAT 147

Query: 527  LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
            LW EL V+ WPT  ++GP G +L  L GEGH++ L       L FY ++  + +  + + 
Sbjct: 148  LWHELEVSCWPTLVILGPRGNMLFSLVGEGHKEKLFLFTSITLKFYKERGQIKDNNIGIK 207

Query: 587  LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL 646
            L KD+ P    SPL FPGK+ +D    RL I+D+ H+RI+VT  +G  +  IG     G 
Sbjct: 208  LYKDSLP---PSPLLFPGKVTVDKSGERLVIADTGHHRILVTLKNGQILHTIGGP-NSGR 263

Query: 647  RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG 706
            +DG F +A FN PQG+A   K N++YVADTENH +R+ID   + V T+AG G +G D +G
Sbjct: 264  KDGRFSEAAFNSPQGVAI--KNNVIYVADTENHLIRKIDLDLEIVTTVAGIGIQGVDKEG 321

Query: 707  GEKGTSQLLNSPWDVCY------KPINEKVYIAMAGQHQIWE-----------HSTVDGV 749
            G KG  Q ++SPWDV           ++ ++IAMAG HQ+W                 GV
Sbjct: 322  GAKGEEQPISSPWDVVLGNSVAGTEEDDVLWIAMAGIHQVWALMLEGGKLPKGSDLKKGV 381

Query: 750  TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGS 807
               F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK G  
Sbjct: 382  CLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEEPWNCLFVADSESSTVRMISLKDGAV 441

Query: 808  RLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLD 864
            + L GG  DP+   NLF FGD DG G    LQHPLG+ +  K   +YVADSYNHKIK +D
Sbjct: 442  KHLVGGERDPL---NLFAFGDVDGAGINAKLQHPLGITWDKKRKLLYVADSYNHKIKVVD 498

Query: 865  PASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGNL-FIADTNNNIIRYLDLNK 922
            P     +TLAG G+A    G++   +  +EP G+   +NG L ++ADTNN+ I+ LDL  
Sbjct: 499  PKMKNCATLAGTGEASNVVGSSFTQSTFNEPGGLCIEENGRLMYVADTNNHQIKVLDLET 558

Query: 923  E--------EPE---------LQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            +         PE          Q  ++  + P  PKS    +L   S+   QTI      
Sbjct: 559  KILSMLPILNPETCDVTDHLATQKDQIANL-PKLPKSAPNIQLPSLSAAPGQTI------ 611

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDP--LDG---NLSPEGSAVLHF 1020
                   LK++LP +   ++EA + + +  E  N  ++    L G   ++S +       
Sbjct: 612  ----QFLLKLTLPPDSKLNEEAPNAWFITAEDNNTWLLQGQYLSGEIKDVSCQTVIPFQL 667

Query: 1021 RRMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
             R+  S  +   I   +YYC +D   C+ K + F  P Q
Sbjct: 668  PRVCLSAEAVLAIKACLYYCSKDSSACMMKGISFNQPLQ 706


>gi|109090607|ref|XP_001091193.1| PREDICTED: NHL repeat-containing protein 2 [Macaca mulatta]
          Length = 726

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/698 (38%), Positives = 386/698 (55%), Gaps = 65/698 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+V+LDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDDKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVA--IMNNIIYVADTENHLIRKIDLEAERVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTISLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKIMD 560

Query: 920  LNKEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +     P  ++          +E +   P  PKS    RL   +    QT+      
Sbjct: 561  LETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVAVCAGQTL------ 614

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFR 1021
                   L++ LP     ++   S + +  E    ++   +      N+S + +  L   
Sbjct: 615  ----QFQLRLDLPSGSKLTEGVPSCWFLRAEGNEWLLQGQMPSGDIENISSQPTISLQIP 670

Query: 1022 RMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                S+ +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 671  DDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|386811933|ref|ZP_10099158.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386404203|dbj|GAB62039.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 669

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/645 (41%), Positives = 381/645 (59%), Gaps = 44/645 (6%)

Query: 424  RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
            RK  P  PE      WLN A      D+KGKVV+LDFWTYCCINCMH++PDL+ LE KY 
Sbjct: 39   RKKIP-APELTGGTAWLNVARPLTLADVKGKVVLLDFWTYCCINCMHIIPDLKKLETKYP 97

Query: 484  DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
            +  F V+GVHSAKF NE++ E IR A+LRY I HPVVND +  +W+  G  +WPT  ++ 
Sbjct: 98   N-EFVVIGVHSAKFKNERESENIRQAILRYEIEHPVVNDSNFAIWQAYGAKAWPTLVLID 156

Query: 544  PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEK-DNDPRLFTSPLKF 602
            P G ++ +  GEGH   LD ++   +  Y  K LL   PLP+ LEK    P LF+    F
Sbjct: 157  PEGNVVGRDTGEGHYDVLDKIIGDVISEYRSKNLLSEKPLPILLEKGKKGPSLFS----F 212

Query: 603  PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
            PGK+  D ++NRLFI+DSNHNRIV+  LDG  +  +G +G+ G  DG+F +A+FN PQG+
Sbjct: 213  PGKVLADEISNRLFIADSNHNRIVIATLDGKVLDVVG-NGKIGKDDGTFTEASFNHPQGM 271

Query: 663  AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
            A++  ++ LYVADTENH +R++D    TV+T+AG G + +    G  GTS  LNSPWD+ 
Sbjct: 272  AFH--RDYLYVADTENHLIRKLDLKTKTVKTIAGTGKQANFMAAGGMGTSSPLNSPWDLV 329

Query: 723  YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT-SFAQPSGISLS 781
            +  +  ++YIAMAG HQIW+ +    V   ++G G E  ++G   L+T + AQPSGI+++
Sbjct: 330  F--LKGQLYIAMAGAHQIWKMNLETTVFEPYAGSGREGCIDG--PLDTCALAQPSGITIA 385

Query: 782  PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                ++Y ADSE S++R ++++    + + G D      LF FGD DG G EV LQHPLG
Sbjct: 386  DK--KLYFADSEVSAVRYVDMEKKEVKTVIGRD------LFVFGDVDGQGEEVRLQHPLG 437

Query: 842  VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
            V+   NG IY+AD+YNHKIK L+P      T+ G G+ G  DG    AQ  EP G+  A 
Sbjct: 438  VW-NYNGLIYIADTYNHKIKVLNPLDKTCRTILGSGQFGHDDGK--DAQFYEPGGLSIAN 494

Query: 902  NGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVV 961
            N  L+IADTNN+ IR +D+  +  E+ TL++ G++    +S+ P  +   + P A+ + +
Sbjct: 495  N-KLYIADTNNHAIRVMDIRTK--EVNTLQVTGLKVEVSESK-PLTI---TLPFAKVLEL 547

Query: 962  D-GGLSNEGNIY--LKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAV- 1017
                L  E  I   L I LP+ YH +      +S  +E  N V ++     +  E   + 
Sbjct: 548  PLKTLKAESCIQLTLNIDLPKGYHLNPNVLLVYS--IEAGNGVQVEQGSQEIRLEKPVLP 605

Query: 1018 --LHFRRMSP-SVSTGRISCKVYYCKEDE--VCLYKPLLFEVPFQ 1057
                F+  +   ++  +IS   YYC+ED    C    +++  P +
Sbjct: 606  IKTSFKTETEIQITDLKISAGFYYCREDNQGACYADAVIWHYPLK 650


>gi|29789158|ref|NP_080087.1| NHL repeat-containing protein 2 [Mus musculus]
 gi|81898236|sp|Q8BZW8.1|NHLC2_MOUSE RecName: Full=NHL repeat-containing protein 2
 gi|26329039|dbj|BAC28258.1| unnamed protein product [Mus musculus]
 gi|63146329|gb|AAH95956.1| NHL repeat containing 2 [Mus musculus]
 gi|148669816|gb|EDL01763.1| NHL repeat containing 2 [Mus musculus]
 gi|187951881|gb|AAI38191.1| NHL repeat containing 2 [Mus musculus]
 gi|223459878|gb|AAI38192.1| NHL repeat containing 2 [Mus musculus]
          Length = 725

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 266/689 (38%), Positives = 387/689 (56%), Gaps = 48/689 (6%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+ +    Y+  V+  +    VPEFP  L+WLNT  PL   +DL GKVVVLDF+TYC
Sbjct: 30   TQQEKDELVYQYLQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYKDLCGKVVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+HVLPDL  LE+++ D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHVLPDLHALERRFSDKDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G LL  L GEGHR  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNLLFSLIGEGHRDKLFSYTSIALKYYKDRGQIRDGKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L K++ P    SPL FPGK+A+D    RL ++D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLFKESLP---PSPLLFPGKVAVDHATGRLVVADTGHHRILVIQKNGRIQSSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F +++FN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGMFSESSFNSPQGVAI--ADNVIYVADTENHLIRKIDLEAEKVTTVAGVGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIW-----------EHSTV 746
             +GGE+G  Q ++SPWDV           N+ ++IAMAG HQIW           +    
Sbjct: 324  TEGGEEGDKQPISSPWDVALGTSGSEVQRNDILWIAMAGTHQIWALLLDSGTLPKKSDLK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG++L+ +  +  ++VADSESS++R ++L+ 
Sbjct: 384  KGTCIRFAGSGNEENRNNAYPHKAGFAQPSGLALASEEPWSCLFVADSESSTVRTVSLRD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG G    LQHPLGV   +  Q+ YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGAGINAKLQHPLGVAWDEERQVLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
             +DP +   +TLAG G A     +   +  +EP G+   ++G  L++ADTNN+ I+ +DL
Sbjct: 501  VVDPKTKGCTTLAGTGDASDASSSFAESAFNEPGGLCIGESGRLLYVADTNNHQIKVMDL 560

Query: 921  NKEEPEL------QTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLK 974
                  +       +  + G  P   +   PK  +  +      + V  G + +  + LK
Sbjct: 561  EARTVSVLPVCKSDSAVVDGSFPREKQKTVPKVPKSAAHIGLPPVTVHPGQALQ--LRLK 618

Query: 975  ISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-ST 1029
            + LP     ++ A S + ++ E    ++ +        N+S + +  L       S+ + 
Sbjct: 619  LQLPPGAKLTEGAPSCWFLEAEGNEWLLQEQTPSGDIENISNQPAISLQIPTHCLSLEAV 678

Query: 1030 GRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              +   +YYC  D   C+ K ++F  P Q
Sbjct: 679  VSVVVFLYYCSADSSACMMKGVVFRQPLQ 707


>gi|355783113|gb|EHH65034.1| hypothetical protein EGM_18374, partial [Macaca fascicularis]
          Length = 723

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/696 (38%), Positives = 385/696 (55%), Gaps = 61/696 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+V+LDF+TYC
Sbjct: 27   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVILDFFTYC 86

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 87   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 146

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 147  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDDKI 206

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 207  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 262

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 263  PGRKDGIFSESTFNSPQGVA--IMNNIIYVADTENHLIRKIDLEAERVSTVAGIGIQGTD 320

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 321  KEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 380

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 381  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTISLKD 440

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 441  GAVKHLVGGERD-PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVV 499

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 500  DPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKIMDLE 559

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          +E +   P  PKS    RL   +    QT+        
Sbjct: 560  TKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTVCAGQTL-------- 611

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRM 1023
                 L++ LP     ++   S + +  E    ++   +      N+S + +  L     
Sbjct: 612  --QFQLRLDLPSGSKLTEGVPSCWFLRAEGNEWLLQGQMPSGDIENISSQPTISLQIPDD 669

Query: 1024 SPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              S+ +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 670  CLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 705


>gi|428308867|ref|YP_007119844.1| thiol-disulfide isomerase-like thioredoxin [Microcoleus sp. PCC
           7113]
 gi|428250479|gb|AFZ16438.1| thiol-disulfide isomerase-like thioredoxin [Microcoleus sp. PCC
           7113]
          Length = 515

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/519 (46%), Positives = 330/519 (63%), Gaps = 23/519 (4%)

Query: 424 RKTTPI-VPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKK 481
           +KT+ +  PE P    WLNT  PL  ++ LKG+VVVLDFWTYCCINC+HVLPDL++LE K
Sbjct: 5   KKTSRVRTPELPQARIWLNTDQPLALKQ-LKGRVVVLDFWTYCCINCLHVLPDLKYLEHK 63

Query: 482 YKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAV 541
           YKD   TV+G+HSAKFD EK+ E IR AVLRY I HPV+ D + ++W++  V +WPT  V
Sbjct: 64  YKD-SLTVIGIHSAKFDQEKEAENIRQAVLRYDIEHPVLVDNNFDVWQQYAVRAWPTLMV 122

Query: 542 VGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLK 601
           + P G ++  ++GEG+R  LD L+E  +  + +K  ++   L L+LEK   P    +PL 
Sbjct: 123 IDPEGYVIGSVSGEGNRDVLDQLIEQVIREHQEKGTINFQELSLTLEKQRQP--LATPLA 180

Query: 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
           FPGK+  D    RLFI+DS H+RIVV+ L G  + Q+  +G+ GL DGSF++A F  PQG
Sbjct: 181 FPGKVLTDEEGERLFIADSGHHRIVVSSLSGE-VQQVIGTGKPGLTDGSFEEAQFFAPQG 239

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWD 720
           +  +++  LLYVADTENH LR++D  N  V+T+AG G +    +    K     LNSPWD
Sbjct: 240 MTLDSENQLLYVADTENHCLRQVDLKNQQVKTIAGTGEQSHHIRPHSGKALETRLNSPWD 299

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           V  + +   + IAMAG HQIWE     G  R ++G G E  L+G+     +FAQPSG  L
Sbjct: 300 V--EKVGHCLLIAMAGSHQIWEMQLETGWLRTYAGTGAEACLDGTPD-QAAFAQPSG--L 354

Query: 781 SPDFMEIYVADSESSSIRALNLKTG-GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           + D  E+Y+ADSE SSIRA+ L      R + G        LF FGD DG  ++V LQH 
Sbjct: 355 TTDGRELYIADSEVSSIRAVGLVDHLPVRTVCGS-----GELFGFGDVDGEDADVRLQHA 409

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV   +N  ++VAD+YNHKIK++DP +    T+ G G AG +DG ++ A+ SEP+G + 
Sbjct: 410 LGVEYTQN-YLWVADTYNHKIKRVDPRTGTCQTMIGQGTAGHQDGQSIKARFSEPSG-LS 467

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           A   +L++ADTNN+ IR + L+    E+ TLE  G+  P
Sbjct: 468 AIAAHLYVADTNNHAIRCIALDT--LEVTTLEFLGLCAP 504


>gi|397510538|ref|XP_003825652.1| PREDICTED: NHL repeat-containing protein 2 [Pan paniscus]
          Length = 726

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 267/696 (38%), Positives = 385/696 (55%), Gaps = 61/696 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEK------VYIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +      ++IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEAQRGDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLVGGERD-PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          +E +   P  PKS    RL   ++   QT+        
Sbjct: 563  TKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL-------- 614

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRM 1023
                 L++ LP     ++   S + +  E    ++   +      N+  + +  L     
Sbjct: 615  --QFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIATGDIENIFSQPTISLQIPDD 672

Query: 1024 SPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              S+ +   IS  +YYC  D   C+ K +LF  P Q
Sbjct: 673  CLSLEAIVSISVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|296221249|ref|XP_002756652.1| PREDICTED: NHL repeat-containing protein 2 [Callithrix jacchus]
          Length = 726

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 267/698 (38%), Positives = 387/698 (55%), Gaps = 65/698 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+V+LDF+TYC
Sbjct: 30   TQQEKNSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++ VHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLRALEHTYSDKDGLLIISVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL ++ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEISCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDDKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N +YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNTIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG +G  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAQGEQQPISSPWDVVFGTSGPEVQRDDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +     +FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAAFAQPSGLSLASEDPWSCLFVADSESSTVRTISLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKHCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKVMD 560

Query: 920  LNKEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +     P  ++          +E +   P  PKS    RL   ++   QT+      
Sbjct: 561  LETKMVSVLPIFRSENVVVDGPFLVEKQKTLPKLPKSAPNIRLSPMTACAGQTL------ 614

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFR 1021
                   L++ LP     ++   S + +  E    ++   +      N+S + +  L   
Sbjct: 615  ----QFKLRLDLPSGSKLTEGVPSCWFLTAEGNEWLLQGQIPSGDIENISNQPTVSLQIP 670

Query: 1022 RMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            +   S+ +   IS  +YYC  D   C+ K +LF  P Q
Sbjct: 671  KDCLSLEAIVSISVFLYYCSADSSACMMKAVLFSQPLQ 708


>gi|327277470|ref|XP_003223487.1| PREDICTED: NHL repeat-containing protein 2-like [Anolis carolinensis]
          Length = 724

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 273/695 (39%), Positives = 391/695 (56%), Gaps = 49/695 (7%)

Query: 402  EGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDF 460
            E  ++  E+      ++  V++ +    VPEF A L WLNT   L   +DL GKVVVLDF
Sbjct: 22   EEATTAQEKENLVYQHLQKVDSWERDLKVPEFGADLQWLNTEGSLSLYKDLCGKVVVLDF 81

Query: 461  WTYCCINCMHVLPDLEFLEKKYK--DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHP 518
            +TYCCINC+HVLPDL  LE+KY   D  F VVGVHSAKF NEK L+ I++AVLRY I+HP
Sbjct: 82   FTYCCINCIHVLPDLHELEQKYSVTDGLF-VVGVHSAKFPNEKILDNIKSAVLRYNITHP 140

Query: 519  VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLL 578
            VVND D  LW EL V+ WPT  +VGP G +L  + GEG ++ L      AL +Y ++  +
Sbjct: 141  VVNDADATLWHELEVSCWPTLIIVGPRGNMLFTVVGEGQKEKLFLFASIALRYYKEQGQI 200

Query: 579  DNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI 638
            +   +   L +D+ P    SPL FPGK+ +D   +RL I+D+ H+RI+V    G  +  +
Sbjct: 201  NANTIRTRLYRDSLP---PSPLLFPGKVTVDSSGDRLVIADTGHHRILVVKKTGQILYTV 257

Query: 639  GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
            G   + G +DG++ +ATFN PQG+A   K N++YVADTENH +R++D   + V T+AG G
Sbjct: 258  GGP-DSGRKDGTYSEATFNSPQGVAI--KNNIIYVADTENHLIRKVDLQLEMVSTVAGVG 314

Query: 699  TKGSDYQGGEKGTSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIWE---------- 742
             +G+D +GG +G  Q ++SPWDV +         ++ ++IAMAG HQIW           
Sbjct: 315  IQGTDKEGGARGDEQPISSPWDVAFGTSVSATHEDDVLWIAMAGIHQIWALMLDCGKLPK 374

Query: 743  -HSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRA 799
                  G    F+G G E N N +     +FAQPSG+S++P+  +  ++VADSESS+IR 
Sbjct: 375  GSDLKKGTCLRFAGSGNEENRNNAYPHKAAFAQPSGLSVAPEEPWNYLFVADSESSTIRT 434

Query: 800  LNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNH 858
            ++LK G  + L GG+   P NLF FGD DG G    LQHPLGV +  K   +YVADSYNH
Sbjct: 435  ISLKDGAVKHLVGGERD-PMNLFAFGDIDGAGINAKLQHPLGVAWDKKRSLLYVADSYNH 493

Query: 859  KIKKLDPASNRVSTLAGIGKAGFKDGAA-LAAQLSEPAGIIEAQNGN-LFIADTNNNIIR 916
            KIK +DP     +TLAG G+A    G++ +++  +EP G+   + G  L++ADTNN+ I+
Sbjct: 494  KIKIVDPKMKNCATLAGTGEASNTVGSSFISSTFNEPGGLCVEEGGCLLYVADTNNHQIK 553

Query: 917  YLDLNKEE----PELQTLELKGVQPPT---PKSRSPKRLRRRSSPDAQTIVVDGGLSNEG 969
             LDL  +     P L +  +  V   +   P    P +L  +S+P+ Q   +        
Sbjct: 554  VLDLETKTISLLPLLNSDTVDAVTDRSMQKPDMAKPPKL-PKSAPNLQLPSLTVSPGQAL 612

Query: 970  NIYLKISLPEEYHFSKEARSKFSVDVE------PENAVIIDPLDGNLSPEGSAVLHFRRM 1023
               LK+SLP     ++E  S + +  E       E   + +  D +  P     +    +
Sbjct: 613  QFALKLSLPSNTKLTEEMPSAWFLTAEGSEWLIHEQKALGEIEDISKQPVIPFQIPMICL 672

Query: 1024 SPSVSTGRISCKVYYCKEDE-VCLYKPLLFEVPFQ 1057
            S  V      C +YYC +D   C+ K + F  PF 
Sbjct: 673  SSEVVLSIKVC-LYYCSKDSNACMMKGISFTQPFH 706


>gi|395828052|ref|XP_003787200.1| PREDICTED: NHL repeat-containing protein 2 [Otolemur garnettii]
          Length = 726

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 271/694 (39%), Positives = 375/694 (54%), Gaps = 57/694 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GKVVVLDF+TYC
Sbjct: 30   TQQEKDNLVYQYVQKVDGWERDLAVPEFPEGLEWLNTEEPISIYKDLCGKVVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+ PDL  LE+ Y D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCLHLFPDLHALERAYSDEDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYQDRGQIKDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D +  RL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKITVDHVTKRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A   K N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--KNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q +NSPWDV     + +V      +IAMAG HQIW           +    
Sbjct: 324  TEGGAKGEEQPINSPWDVILGTSDSEVQRDDILWIAMAGTHQIWALLLDSGKLPKKSELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+    +  ++V DSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASGEPWSCLFVVDSESSTVRTVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +    TLAG G       ++ A +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCMTLAGTGDTNNVISSSFAESTFNEPGGLCIGENGQLLYVADTNNHQIKVMD 560

Query: 920  LNKEEPELQTL--------------ELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +   +  +              E +   P  PKS     L   +    QT+     L
Sbjct: 561  LETKTISVLPIFTSENATVDGPFPAEKQRTLPKLPKSAPSIGLPAMTVCPGQTLQFKLRL 620

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSP 1025
                   L   +P  +  S +          P   +       N+S + +  L       
Sbjct: 621  ELPSGTKLTEGVPSCWFLSADGNEWLLQGQTPSGDI------ENISNQPTISLQIPGDCL 674

Query: 1026 SV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            S+ +   IS  +YYC  D   C+ K +LF  P Q
Sbjct: 675  SLEAIVSISVFLYYCSADSSACMMKAILFSQPLQ 708


>gi|431895427|gb|ELK04943.1| NHL repeat-containing protein 2 [Pteropus alecto]
          Length = 726

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 270/699 (38%), Positives = 387/699 (55%), Gaps = 67/699 (9%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +   +VPEFP  L+WLNT  P+   ++L GKV++LDF+TYC
Sbjct: 30   TQEEKNNLVYQYLQKVDGWEQDLLVPEFPEGLEWLNTEEPISVYKNLCGKVIILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEDTYSDKDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  + GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVIFGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D ++ RL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDHVSKRLVIADTGHHRILVIWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +GSD
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEMVSTIAGIGIQGSD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV     + +V      +IAMAG HQIW           +    
Sbjct: 324  KEGGAKGEQQPISSPWDVVIGTSDSEVQRDDILWIAMAGTHQIWALLLDCGRLPKKSELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDIDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G A    G++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKHCTTLAGTGDASNVIGSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKVMD 560

Query: 920  LNKEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +     P   +          +E +   P  PKS    RL   ++   QT+      
Sbjct: 561  LETKTISVLPVFMSESTIVDGPFLVEKQKTVPILPKSAPAIRLPPVAASPGQTL------ 614

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFR 1021
                   L++ LP     ++ A S + +  +    ++   +      ++S + +  L   
Sbjct: 615  ----QFKLRLDLPSGTKLTEGAPSCWFLTAKDNEWLLQGQIPSGEIESISSQPTIQLQIP 670

Query: 1022 R--MSPSVSTGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
               +SP      +S  +YYC  D   C+ K + F  P Q
Sbjct: 671  ADCLSPEAVI-SVSVLLYYCSADSSACMMKGISFSQPLQ 708


>gi|12835819|dbj|BAB23375.1| unnamed protein product [Mus musculus]
          Length = 748

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/689 (38%), Positives = 386/689 (56%), Gaps = 48/689 (6%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+ +    Y+  V+  +    VPEFP  L+WLNT  PL   +DL GKVVVLDF+TYC
Sbjct: 53   TQQEKDELVYQYLQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYKDLCGKVVVLDFFTYC 112

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+HVLPDL  LE+++ D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 113  CINCIHVLPDLHALERRFSDKDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 172

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G LL  L GEGHR  L      AL +Y  +  + +  +
Sbjct: 173  DASLWQELEVSCWPTLVILGPRGNLLFPLIGEGHRDKLFSYTSIALKYYKDRGQIRDGKI 232

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L K++ P    SPL FPGK+A+D    RL ++D+ H+RI+V   +G     IG    
Sbjct: 233  GIKLFKESLP---PSPLLFPGKVAVDHATGRLVVADTGHHRILVIQKNGRIQSSIGGP-N 288

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F +++FN PQG+A     N++YVADTENH +R+ D   + V T+AG G +G+D
Sbjct: 289  PGRKDGMFPESSFNSPQGVAI--ADNVIYVADTENHLIRKTDLEAEKVTTVAGVGIQGTD 346

Query: 704  YQGGEKGTSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIW-----------EHSTV 746
             +GGE+G  Q ++SPWDV           N+ ++IAMAG HQIW           +    
Sbjct: 347  TEGGEEGDKQPISSPWDVALGTSGSEVQRNDILWIAMAGTHQIWALLLDSGTLPKKSDLK 406

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG++L+ +  +  ++VADSESS++R ++L+ 
Sbjct: 407  KGTCIRFAGSGNEENRNNAYPHKAGFAQPSGLALASEEPWSCLFVADSESSTVRTVSLRD 466

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG G    LQHPLGV   +  Q+ YVADSYNHKIK
Sbjct: 467  GAVKHLVGGERDPM---NLFAFGDVDGAGINAKLQHPLGVAWDEERQVLYVADSYNHKIK 523

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
             +DP +   +TLAG G A     +   +  +EP G+   ++G  L++ADTNN+ I+ +DL
Sbjct: 524  VVDPKTKGCTTLAGTGDASDASSSFAESAFNEPGGLCIGESGRLLYVADTNNHQIKVMDL 583

Query: 921  NKEEPEL------QTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLK 974
                  +       +  + G  P   +   PK  +  +      + V  G + +  + LK
Sbjct: 584  EARTVSVLPVCKSDSAVVDGSFPREKQKTVPKVPKSAAHIGLPPVTVHPGQALQ--LRLK 641

Query: 975  ISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-ST 1029
            + LP     ++ A S + ++ E    ++ +        N+S + +  L       S+ + 
Sbjct: 642  LQLPPGAKLTEGAPSCWFLEAEGNEWLLQEQTPSGDIENISNQPAISLQIPTHCLSLEAV 701

Query: 1030 GRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              +   +YYC  D   C+ K ++F  P Q
Sbjct: 702  VSVVVFLYYCSADSSACMMKGVVFRQPLQ 730


>gi|157818439|ref|NP_001100914.1| NHL repeat-containing protein 2 [Rattus norvegicus]
 gi|149040462|gb|EDL94500.1| NHL repeat containing 2 (predicted) [Rattus norvegicus]
          Length = 725

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/689 (38%), Positives = 384/689 (55%), Gaps = 48/689 (6%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  PL   RDL GKVV+LDF+TYC
Sbjct: 30   TQQEKDDLVYQYLQKVDGWEQDLAVPEFPEGLEWLNTEEPLSIYRDLCGKVVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+HVLPDL  LE+ + D     +VGVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHVLPDLHALERTFSDTDGLLIVGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDT 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G LL  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNLLFSLIGEGHKDKLFSYTSIALKYYKDRGQIRDGKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L K++ P    SPL FPGK+A D    RL ++D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLFKESLP---PSPLLFPGKVAADPTTGRLVVADTGHHRILVLQKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F +++F+ PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGVFSESSFHSPQGVAI--ADNVIYVADTENHLIRKIDLEAEKVSTVAGIGVQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GGE+G  Q ++SPWDV       KV      +IAMAG HQIW           +    
Sbjct: 324  TEGGEEGDKQPISSPWDVALGTSGSKVQRNDILWIAMAGTHQIWAFLLDSGTLPKKSDLK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG++L+P+  +  ++VADSESS++R ++L+ 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLALAPEEPWSCLFVADSESSTVRTVSLRD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGAGISAKLQHPLGVAWDEKRHLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
             +DP +   +TLAG G A     +   +  +EP G+   + G  L++ADTNN+ I+ +DL
Sbjct: 501  VVDPNTKVCTTLAGTGDANDASSSFAESAFNEPGGLCIGERGRLLYVADTNNHQIKVMDL 560

Query: 921  NKEEPEL------QTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLK 974
                  +       +  + G  P   +   PK  +   +     + V  G + +  + L+
Sbjct: 561  EARTVSVLPVFKSDSAVVDGSFPREKQKTVPKVPKSAPNISLPPVTVHPGQALQ--LGLR 618

Query: 975  ISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-ST 1029
            + LP     ++ A S + +  E    ++ + +      N+S + +  L       S+ + 
Sbjct: 619  LELPPGAKLTEGAPSGWFLKAEGNEWLLQEQIPSGDIENISNQPAISLQIPTECLSLEAV 678

Query: 1030 GRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              ++  +YYC  D   C+ K ++F  P Q
Sbjct: 679  VSVTVFLYYCSADSSACMMKGVVFRQPLQ 707


>gi|344274719|ref|XP_003409162.1| PREDICTED: NHL repeat-containing protein 2 [Loxodonta africana]
          Length = 726

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 271/690 (39%), Positives = 379/690 (54%), Gaps = 55/690 (7%)

Query: 409  ERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCIN 467
            E+      Y+  V+  +    VPEFP  L WLNT  P+   +DL GKVVVLDF+TYCCIN
Sbjct: 33   EKDSLVYQYLQKVDGWEQDLSVPEFPEGLQWLNTEGPISVYKDLCGKVVVLDFFTYCCIN 92

Query: 468  CMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMN 526
            C+H+LPDL  LE  Y D     VVGVHSAKF NEK L++I++AVLRY I+HPVVND D +
Sbjct: 93   CIHLLPDLHTLEHTYSDKDGLLVVGVHSAKFPNEKVLDSIKSAVLRYNITHPVVNDADAS 152

Query: 527  LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
            LW++L V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  +    + + 
Sbjct: 153  LWQDLEVSCWPTLVILGPRGNMLFSLMGEGHKDKLFLYTSIALKYYKDRGQIREKTIGIK 212

Query: 587  LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL 646
            L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG     G 
Sbjct: 213  LYKDSLP---PSPLLFPGKVIVDHVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-NPGR 268

Query: 647  RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG 706
            +DG+F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D +G
Sbjct: 269  KDGTFSESTFNSPQGVA--IMNNVIYVADTENHLIRKIDLEAEIVSTVAGIGIQGTDKEG 326

Query: 707  GEKGTSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIW-----------EHSTVDGV 749
            G KG  Q ++SPWDV           N+ ++IAMAG HQIW           ++    G 
Sbjct: 327  GAKGEQQPISSPWDVVLGTSGSEIQRNDILWIAMAGTHQIWALLLDSGKLPKKNELKKGT 386

Query: 750  TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGS 807
               F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK G  
Sbjct: 387  CLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEEPWSCLFVADSESSTVRTVSLKDGAV 446

Query: 808  RLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLD 864
            + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +D
Sbjct: 447  KHLIGGERDPM---NLFAFGDVDGVGISAKLQHPLGVTWDKKRSLLYVADSYNHKIKVVD 503

Query: 865  PASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNK 922
            P +    TLAG G A     ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL  
Sbjct: 504  PKTKNCLTLAGTGDASNVISSSFTESTFNEPGGLCIGENGRLLYVADTNNHQIKVMDLET 563

Query: 923  EE----PELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLP 978
            +     P +++       P  P  +       +S+P      V           L++ LP
Sbjct: 564  KTISVLPVIRSENSVVDGPVLPDKQKTLPKLPKSAPSISLSPVTASPGQTLQFKLRLDLP 623

Query: 979  EEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSV----------S 1028
                 ++   S + +  E    +      G +S  G     F + + SV          +
Sbjct: 624  SGTKLTEGVPSCWFLTAEGNEWL----FQGQIS-SGEIESIFNQPTISVQIPGDCLSLEA 678

Query: 1029 TGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            T  I   +YYC  D   C+ K +LF  P Q
Sbjct: 679  TVSIRVFLYYCSADSSACMMKGILFSQPLQ 708


>gi|326672461|ref|XP_003199671.1| PREDICTED: NHL repeat-containing protein 2-like [Danio rerio]
          Length = 719

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 278/691 (40%), Positives = 390/691 (56%), Gaps = 48/691 (6%)

Query: 402  EGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDF 460
            E  +SQ E+ +    Y+  ++ R+   IVP+F   L+WLNT  PL  R++L GKVV+LDF
Sbjct: 22   EETTSQEEKEKLVHEYLLKIDEREDL-IVPDFEEGLEWLNTDGPLSLRKELSGKVVLLDF 80

Query: 461  WTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPV 519
            +TYCCINC+H+LPDL  LEK Y       VVGVHSAKF NEK L+ +++AVLRY ISHPV
Sbjct: 81   FTYCCINCIHILPDLHQLEKNYSIQDGLIVVGVHSAKFPNEKVLQNVQSAVLRYDISHPV 140

Query: 520  VNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLD 579
            VND D  LW+EL V+ WPT  ++GP G LL  L GEGHR+ L     AAL  Y ++ LL 
Sbjct: 141  VNDSDARLWQELEVSCWPTLVLLGPRGNLLFSLVGEGHREHLFLFTAAALKHYREQGLLK 200

Query: 580  NTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIG 639
            +  + + L +D+ P    S L FPGK+AID    +L I+D+ H+R++V    G  +  +G
Sbjct: 201  DHNVGIKLYRDSLP---PSILSFPGKIAIDPSGKQLAIADTGHHRVLVVSNTGQVLHTVG 257

Query: 640  SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
                 G RDG+  +A F+ PQGL    K + +YVADTENH +R+I+     V TLAG G 
Sbjct: 258  GP-SSGKRDGNLSEAQFSSPQGLFI--KGDTVYVADTENHLVRKINLTEGKVSTLAGIGV 314

Query: 700  KGSDYQGGEKGTSQLLNSPWDVCYKPINEKV-YIAMAGQHQIWEHSTVD----------- 747
            +G+D +GG  G  Q ++SPWDV        V +IAMAG HQIW     D           
Sbjct: 315  QGTDKEGGALGPQQPISSPWDVTLGSAGGDVLWIAMAGTHQIWALFLEDGKLPKGSDSKA 374

Query: 748  GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTG 805
            G    F+G G E N N +       AQPSG++L+P   +  +++ADSESS+IR+L+LK G
Sbjct: 375  GTCVRFAGSGNEENRNNAYPHKAGLAQPSGLALAPTEPWESLFIADSESSTIRSLSLKDG 434

Query: 806  GSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKK 862
              + + GG  DP+   NLF FGD DG G +  LQHPLGV +      +YVADSYNHKIK 
Sbjct: 435  AVKHVVGGERDPL---NLFAFGDVDGKGIDAKLQHPLGVSWDEGRSLLYVADSYNHKIKV 491

Query: 863  LDPASNRVSTLAGIGKAGFKDGAA-LAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
            +DP + +   LAG GKAG   G + L +  +EP G+   + G  L++ADTNN+ I+ LDL
Sbjct: 492  VDPKTKQCMVLAGTGKAGNGIGPSFLESSFNEPGGLCVGEGGKLLYVADTNNHHIKVLDL 551

Query: 921  NKEE----PELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEG---NIYL 973
              +     P +   ++  +   T  + S  + R +    A  + +     + G    + L
Sbjct: 552  ETKTVSLFPIVGHQDVDAILKTTTNNTSAVKKRPKLPKSAPVLAMPSISISSGQSVTLLL 611

Query: 974  KISLPEEYHFSKEARSKFSVDVEP-----ENAVIIDPLDGNLSPEGSAVLHF--RRMSPS 1026
            K++LP     ++EA S +S+  E      E   +   +D +LS   S VL      +SP 
Sbjct: 612  KLALPAGTKLTEEAPSFWSLSAEGNEWLLEGRAVTGSID-DLSEPISIVLSIPVAPVSPD 670

Query: 1027 VSTGRISCKVYYC-KEDEVCLYKPLLFEVPF 1056
              T  +   +Y+C  E   C+ K + F+ P 
Sbjct: 671  -PTLTLDAWLYFCVSEGGACMMKTVSFKQPL 700


>gi|351706822|gb|EHB09741.1| NHL repeat-containing protein 2 [Heterocephalus glaber]
          Length = 726

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 269/687 (39%), Positives = 377/687 (54%), Gaps = 53/687 (7%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL+GKVV+LDF++YC
Sbjct: 30   TQREKDDLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLRGKVVILDFFSYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     +VGVHSAKF NEK L+ I +AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHELEHTYSDKDGLLIVGVHSAKFPNEKVLDNITSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW++L V+ WPT  ++GP G +L  L GEGH++ L      AL +Y  +  + +  +
Sbjct: 150  DASLWQDLEVSCWPTLVILGPRGNMLFSLIGEGHKEKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D   NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDHATNRLVIADTGHHRILVIWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGLFSESTFNSPQGVA--MMDNVIYVADTENHLIRKIDLEAERVSTVAGIGVQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q + SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPICSPWDVAFGTSGSEVKRNNILWIAMAGIHQIWALLLDSSKLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWNCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
            G  + L GG+   P NLF FGD DG+G +  LQHPLGV +  K   +YVADSYNHKIK +
Sbjct: 444  GAVKHLIGGERD-PMNLFAFGDVDGVGIDAKLQHPLGVAWDKKRNLLYVADSYNHKIKVV 502

Query: 864  DPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLN 921
            DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL 
Sbjct: 503  DPKTKNCTTLAGTGNTNNVTSSSFTESTFNEPGGLCVGENGRLLYVADTNNHQIKVMDLE 562

Query: 922  KEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN 967
             +     P  ++          LE     P  PKS    RL   +    QT+    GL  
Sbjct: 563  TKTISVLPVFKSENAVVDGPLRLEKPKSVPKLPKSAPSIRLSPVTVCPGQTLQFKLGLDL 622

Query: 968  EGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSV 1027
                 L   +P  +  + E          P   +       N+S + +  L       S+
Sbjct: 623  PSGTKLTDGVPSCWFLTAEGNEWLLQGQIPSGDI------ENISSQPTISLQIPGNCLSL 676

Query: 1028 STG-RISCKVYYCKED-EVCLYKPLLF 1052
                 IS  +YYC  D   C+ K +LF
Sbjct: 677  EVVLSISVFLYYCSADSSACMMKGILF 703


>gi|403259474|ref|XP_003922237.1| PREDICTED: NHL repeat-containing protein 2 [Saimiri boliviensis
            boliviensis]
          Length = 726

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 267/689 (38%), Positives = 384/689 (55%), Gaps = 47/689 (6%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+V+LDF+TYC
Sbjct: 30   TQQEKDNLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++ VHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLRALEHTYSDKDGLLIISVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSVALKYYKDRGQIRDDKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             +   KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKPYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVA--IMNNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSGSEVQRDDILWIAMAGTHQIWALLLDSGKLPKKNELT 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +     +FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAAFAQPSGLSLASEDPWSCLFVADSESSTVRTISLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLVGGERDPM---NLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKVMD 560

Query: 920  L-NKEEPELQTLELKGVQPPTP----KSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLK 974
            L  K    L     + V    P    K ++  +L  +S+P+     V           L+
Sbjct: 561  LETKMVSVLPIFRSENVVVDGPFLVEKQKTLPKL-PKSAPNIGLSPVTACAGQTLQFKLR 619

Query: 975  ISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-ST 1029
            + LP     ++   S + +  E    ++   +      N+S + +  L       S+ + 
Sbjct: 620  LDLPSGSKLTEGVPSCWFLTAEGNEWLLQGQIPSGDIENISNQPTISLQIPNDCLSLEAV 679

Query: 1030 GRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              IS  +YYC  D   C+ K +LF  P Q
Sbjct: 680  VSISVFLYYCSADSSACMMKAVLFSQPLQ 708


>gi|254417234|ref|ZP_05030979.1| Redoxin family [Coleofasciculus chthonoplastes PCC 7420]
 gi|196176040|gb|EDX71059.1| Redoxin family [Coleofasciculus chthonoplastes PCC 7420]
          Length = 496

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/513 (47%), Positives = 321/513 (62%), Gaps = 24/513 (4%)

Query: 427 TPIV--PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           TP V  PE P    WLNT  PL    +LKG+VV+LDFWTYCCINC+HVLPDL +LE+KYK
Sbjct: 2   TPRVRAPELPQDSIWLNTNHPLSLT-NLKGRVVILDFWTYCCINCLHVLPDLNYLEQKYK 60

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D    V+G+HSAKFDNEKD E IR A+LRY + HPVV D + NLW++  V +WPT  V+ 
Sbjct: 61  D-SLIVIGIHSAKFDNEKDAENIRQAILRYDVEHPVVVDFNGNLWQQYAVRAWPTLIVID 119

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFP 603
           P G ++  +AGEG+R+ LD L+   +  +  K  +   PL  +LEK   P   T+PL FP
Sbjct: 120 PEGYVIRDVAGEGNREVLDQLIGELIQKHQHKGTMTMEPLHFTLEKQQHP--LTNPLAFP 177

Query: 604 GKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
           GK+  D  ++RLFI+DS H+RI+V+ L G  +  IG +GE GL DG+F +A F  PQG+ 
Sbjct: 178 GKVLADEFSDRLFIADSGHHRILVSTLTGEVLNIIG-TGEPGLTDGTFAEAQFFAPQGIT 236

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK-GTSQLLNSPWDVC 722
            +     LYVADT+NH LR I      V T+AG G +    Q     G    LNSPWD+ 
Sbjct: 237 LDPDNQRLYVADTDNHCLRCIHLETKQVETIAGTGEQSRQIQPHSGLGLQTALNSPWDI- 295

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
            + I+ ++ IAMAG HQIWE     G    ++G G E  L+GS +   +FAQPSGI  + 
Sbjct: 296 -EIIDNRLLIAMAGSHQIWEMQLETGEIGTYAGTGAEACLDGSLN-EAAFAQPSGI--TS 351

Query: 783 DFMEIYVADSESSSIRALNLKTG-GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
           D  E+YVADSE SSIR + L      R + G        LF+FGDRDG  SEV LQH LG
Sbjct: 352 DGRELYVADSEVSSIRGVGLINNLPVRTICGS-----GELFEFGDRDGHKSEVRLQHCLG 406

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           V   +N  ++VAD+YNHKIK++DP +    TL G GKAG +DG +  A+ +EP+G + A 
Sbjct: 407 VEYTQN-YLWVADTYNHKIKRVDPTTGSCQTLLGNGKAGHRDGQSHEAEFAEPSG-VSAI 464

Query: 902 NGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934
              L+IADTNN++IR +DL     E+ TL L G
Sbjct: 465 AARLYIADTNNHVIRCVDLGT--LEVTTLNLSG 495


>gi|149177401|ref|ZP_01856005.1| hypothetical protein PM8797T_18906 [Planctomyces maris DSM 8797]
 gi|148843734|gb|EDL58093.1| hypothetical protein PM8797T_18906 [Planctomyces maris DSM 8797]
          Length = 683

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 267/658 (40%), Positives = 369/658 (56%), Gaps = 40/658 (6%)

Query: 428  PIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPF 487
            P  P     ++WLNT+     +DL+GKVV++DFWTYCCINCMHVLPDL +LEKKY +   
Sbjct: 52   PKAPSIDGGVEWLNTSGEITLKDLRGKVVLIDFWTYCCINCMHVLPDLAYLEKKYPN-EL 110

Query: 488  TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
             V+G HSAKFDNEK+ + IR A+ RY I HPV+ND +M +WR+ GV +WP+  ++ P G 
Sbjct: 111  VVIGCHSAKFDNEKETDNIRRAIQRYEIKHPVINDANMTVWRKFGVRAWPSMVLIDPEGN 170

Query: 548  LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
                L+GEG+R+ LD ++E  + ++  K  LD TP+   LE     +L  +PLKFPGKL 
Sbjct: 171  YCGHLSGEGNRELLDKVLEKVIAYHRAKGTLDETPVHFELES---AKLKQTPLKFPGKLL 227

Query: 608  IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
             D    RLFISDSNHNRIV+  LDG  I  IG SG+ G +DG +  A+F+ PQG+A    
Sbjct: 228  ADPAQQRLFISDSNHNRIVIASLDGKLIDVIG-SGQIGNKDGDYKTASFDHPQGMALVG- 285

Query: 668  KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
             N LYVADTENH++R +D     V TLAG G +      G K     LNSPW +    I+
Sbjct: 286  -NTLYVADTENHSIRTVDLDKKQVSTLAGTGEQARFRSAGGKLKEAALNSPWALA--AID 342

Query: 728  EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS-FAQPSGISLSPDFME 786
            + +YI MAG HQIW H         ++G G E   NG   L TS FAQ SGI++  D   
Sbjct: 343  DVLYICMAGPHQIWSHKLGSDEIGVYAGSGREDITNG--PLETSAFAQTSGIAVDGDVF- 399

Query: 787  IYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
             YV DSE S++R ++ K      +AG  D     +LF+FGD+DG+G    LQHPLGV   
Sbjct: 400  -YVVDSEGSAVRKVDTKNKTVSTVAGTSDLERGRSLFEFGDKDGIGEAARLQHPLGVL-Y 457

Query: 846  KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL-AAQLSEPAGIIEAQNGN 904
             NG++YVAD+YNHK+K +D  +N V T  G G    KDG +L   + SEP+G+ +  N  
Sbjct: 458  DNGRLYVADTYNHKLKTIDLKTNEVKTFLGTG----KDGNSLNPVEFSEPSGLAKVGN-R 512

Query: 905  LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT-PK----SRSPKRLRRRSSPDAQTI 959
            LF+ADTNN   R   +N ++ ++   ++ G+ PP+ PK    S +    +  ++P  Q +
Sbjct: 513  LFVADTNNQ--RICVVNLDDHKVSEFKIAGLAPPSLPKTVDDSFTAAADKALNAP-PQKV 569

Query: 960  VVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSA-VL 1018
            V    L     I +   LP +Y  S  A  KF+        VI+    G  + EG   VL
Sbjct: 570  VPGAAL----KIKVSPQLPTDYKLSPLAPVKFTFKSAENPEVIL--ARGKGAVEGDQLVL 623

Query: 1019 HFRRMSPSVSTGRISCKVYYCKE--DEVCLYKPLLFEVPFQEEVPNSPPAEITLPYDL 1074
                M        ++ +  YC++    +C      + +P Q +   +    I+L  DL
Sbjct: 624  QLPAMKQLSGKYTLNLRFGYCRDGVGGLCKQHSAQWNIPLQAD-KGAKSESISLSLDL 680


>gi|395502099|ref|XP_003755423.1| PREDICTED: NHL repeat-containing protein 2 [Sarcophilus harrisii]
          Length = 1044

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/683 (39%), Positives = 384/683 (56%), Gaps = 66/683 (9%)

Query: 433  FPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-FTVV 490
            +P  L+WLNT   +   +DL GKVVVLDF+TYCCINC+H+LPDL  LE KY D     ++
Sbjct: 377  WPQGLEWLNTEGSISVYKDLCGKVVVLDFFTYCCINCIHLLPDLHALEHKYTDKDGLLII 436

Query: 491  GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
            GVHSAKF NEK L+ I++AVLRY I+HPVVND D  LW+EL V+ WPT  ++GP G ++ 
Sbjct: 437  GVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDADAFLWQELEVSCWPTLVILGPRGNIIF 496

Query: 551  QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
             L GEGHR+ L      AL +Y  +  + +  + + L KD+ P   +SPL FPGK+AID 
Sbjct: 497  SLVGEGHREKLFLFTSMALKYYKDRGQIKDNKIGIKLYKDSLP---SSPLLFPGKVAIDD 553

Query: 611  LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            + + L I+D+ H+RI+V   +G     IG     G +DG+F ++TFN PQG+A   K N+
Sbjct: 554  VTDSLVIADTGHHRILVVRKNGQIQHSIGGP-NSGRKDGTFLESTFNSPQGVAI--KNNI 610

Query: 671  LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYK------ 724
            +YVADTENH +R+ID     V T+AG G +G+D +GG KG  Q ++SPWDV +       
Sbjct: 611  IYVADTENHLIRKIDLETKMVSTVAGIGIQGTDKEGGAKGEEQPISSPWDVVFGISVSEI 670

Query: 725  PINEKVYIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
              ++ ++IAMAG HQIW           +     G    F+G G+E N N +      FA
Sbjct: 671  CKDDILWIAMAGIHQIWALLLDDGRLPKKSELTKGTCLRFAGSGHEENRNNAYPHKAGFA 730

Query: 774  QPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGG--DPIFPDNLFKFGDRDG 829
            QPSG+S++ +  +  ++VADSESS++R ++LK G  + L GG  DP+   NLF FGD DG
Sbjct: 731  QPSGLSVASEEPWNCLFVADSESSTVRTVSLKDGAVKHLVGGERDPM---NLFAFGDVDG 787

Query: 830  MGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG-FKDGAAL 887
             G    LQHPLGV +  K   +YVADSYNHKIK +DP +   +T+AG G+A       + 
Sbjct: 788  AGINAKLQHPLGVAWDKKRNLLYVADSYNHKIKVVDPKTKSCTTIAGTGEASNVITSTST 847

Query: 888  AAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQ------PPTP 940
             +  +EP G+   ++ N L+IADTNN+ I+ +DL  E   +  L +   +      P   
Sbjct: 848  ESTFNEPGGLCIGEDNNLLYIADTNNHQIKVMDL--ETKIISVLPIINFETAVVDGPFLE 905

Query: 941  KSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENA 1000
            K + PK    +SSP+ +   +           L++  P E   ++ A S + +  E    
Sbjct: 906  KQKLPK--LPKSSPNVKLSPLTVSPGQSLQFILRLDFPAETKLTEGAPSFWFLTAEGNEW 963

Query: 1001 VIIDPLDGNLSPEG-----------SAVLHFRRMSPSVSTGRISCKVYYCKEDE-VCLYK 1048
            +    L+G  +P G           S  + +  +S  +      C +YYC  D   C+ K
Sbjct: 964  L----LEGQ-TPSGEIRSLSKQPVISLQIPYSCLSFELVVSICVC-LYYCSADSNACMMK 1017

Query: 1049 PLLFEVPFQ---EEVPNSPPAEI 1068
             +LF  P Q       N+PP E+
Sbjct: 1018 GILFSQPLQITKTHQSNTPPVEL 1040


>gi|156406833|ref|XP_001641249.1| predicted protein [Nematostella vectensis]
 gi|156228387|gb|EDO49186.1| predicted protein [Nematostella vectensis]
          Length = 708

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 255/673 (37%), Positives = 374/673 (55%), Gaps = 61/673 (9%)

Query: 430  VPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-F 487
            +PEF   ++WLN    L FR  L+GK+ VLDF+TYCCINCMH+LPDLE +E+K+ +    
Sbjct: 31   IPEFDPDIEWLNCKNSLSFREQLRGKLCVLDFFTYCCINCMHILPDLEEMERKFSEKDGL 90

Query: 488  TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
             +VGVHSAKF+NE+    I +AV+RY I H VVND D  +W  LGV+ WPT  +VGP G+
Sbjct: 91   VIVGVHSAKFENERSSANILSAVIRYDIRHAVVNDSDAKMWHTLGVSCWPTLVIVGPGGE 150

Query: 548  LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
            LL  L GEGH++ L   V+AAL +Y     + +  + LSL K++ P+   S L +PGK+ 
Sbjct: 151  LLLSLVGEGHKQTLLRFVDAALKYYKCSGQISDHEIGLSLAKESIPK---SKLLYPGKVC 207

Query: 608  IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEE----GLRDGSFDDATFNRPQGLA 663
            +D    RL I+D+ H+R++V   +G     IG  GE+    G +DG+F +A F+ PQG+A
Sbjct: 208  LDGAGRRLVIADTGHHRVIVCSTEGVVHEVIG--GEDGFSAGFQDGTFKEAKFHAPQGVA 265

Query: 664  YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
               +  ++YVADTENHA+REI+  +  V T+AG G +G+D +GG +G  Q ++SPW V  
Sbjct: 266  MLGE--VIYVADTENHAIREINLDSKKVTTVAGTGRQGADKEGGRQGREQTISSPWGVAL 323

Query: 724  KPI---------NEKVYIAMAGQHQIWEHSTVD-----------GVTRAFSGDGYERNLN 763
             P             +YIAMAG HQIW     D           G    F+G G E N N
Sbjct: 324  GPAPGSKTDDNPANVLYIAMAGTHQIWSLYLDDGPWLKGGSHKAGTLVRFAGSGNEENRN 383

Query: 764  GSSSLNTSFAQPSG--ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
             S     +FAQPSG  +++S     ++VADSESSS+R ++++TG ++ + G D   P NL
Sbjct: 384  NSYPHKAAFAQPSGLAVAISNTLRCLFVADSESSSVRCVDIETGATKAVVGADRD-PMNL 442

Query: 822  FKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
            F FGD DG G +   QHPLGV +  +   + VADSYNHKIK ++P     ST  G GK  
Sbjct: 443  FAFGDVDGKGVDAKFQHPLGVAWNPQEDHLLVADSYNHKIKTVEPKQKTCSTFLGHGKPD 502

Query: 881  FKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTL--ELKGVQP 937
                      L EP G+  +Q+   ++IADTNN++IR +DL  +   +  L   +   + 
Sbjct: 503  -------PDVLDEPGGLCISQDSKRMYIADTNNHVIRVVDLQTKTTAVLNLIDHVSSGRS 555

Query: 938  PTPKSRSP----KRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSV 993
             T     P    +RL    +P  Q   V    S +  + ++I+LP   HF++ A S++  
Sbjct: 556  QTDSGGRPQAAIRRLTSIRTPVTQHPPVHVTHSQDLELRIEIALPPGCHFTEGATSRWQA 615

Query: 994  DVEPENAVIID-------PLDGNLSPE---GSAVLHFRRMSPSVSTGRISCKVYYCKEDE 1043
                + A  ++       P +G  + E    S    +R    S ++ ++   VY+C+E  
Sbjct: 616  YCVDQTASRLEDSLSGLTPRNGVFTEESLTASTSFCYRPDLDSATSVQVEAVVYFCEEGG 675

Query: 1044 VCLYKPLLFEVPF 1056
             C  +  +++VP 
Sbjct: 676  TCRMEGFIYDVPL 688


>gi|326672463|ref|XP_003199672.1| PREDICTED: NHL repeat-containing protein 2-like [Danio rerio]
          Length = 719

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 275/691 (39%), Positives = 388/691 (56%), Gaps = 48/691 (6%)

Query: 402  EGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDF 460
            E  +SQ E+ +    Y+  ++ R+   IVP+F   L+WLNT  PL   ++L GKVV+LDF
Sbjct: 22   EETTSQEEKEKLVHEYLLKIDEREDL-IVPDFEEGLEWLNTDGPLSLGKELLGKVVLLDF 80

Query: 461  WTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPV 519
            +TYCCINC+H+LPDL  LEK Y       VVGVHSAKF NEK L+ +++AVLRY I+HPV
Sbjct: 81   FTYCCINCIHILPDLHQLEKNYSIQDGLIVVGVHSAKFPNEKVLQNVQSAVLRYDINHPV 140

Query: 520  VNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLD 579
            VND D  LW+EL V+ WPT  ++GP G LL  L GEGHR+ L     AAL  Y ++ LL 
Sbjct: 141  VNDSDARLWQELEVSCWPTLLLLGPRGNLLFSLVGEGHREHLFLFTAAALKHYREQGLLK 200

Query: 580  NTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIG 639
            +  + + L +D+ P    S L FPGK+AID    +L I+D+ H+R++V    G  +  +G
Sbjct: 201  DHNVGIKLYRDSLP---PSILSFPGKIAIDPSGKQLAIADTGHHRVLVVSNTGQVLHTVG 257

Query: 640  SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
                 G RDG+  +A F+ PQGL    K + +YVADTENH +R+I+     V TLAG G 
Sbjct: 258  GP-SSGKRDGNLSEAQFSSPQGLFI--KGDTVYVADTENHLVRKINLTEGKVSTLAGIGV 314

Query: 700  KGSDYQGGEKGTSQLLNSPWDVCYKPINEKV-YIAMAGQHQIWEHSTVD----------- 747
            +G+D +GG  G  Q ++SPWDV        V +IAMAG HQIW     D           
Sbjct: 315  QGTDKEGGALGPQQPISSPWDVTLGSAGGDVLWIAMAGTHQIWALFLEDGKLPKGSDSKA 374

Query: 748  GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTG 805
            G    F+G G E N N +       AQPSG++L+P   +  +++ADSESS+IR+L+LK G
Sbjct: 375  GTCVRFAGSGNEENRNNAYPHKAGLAQPSGLALAPTEPWESLFIADSESSTIRSLSLKDG 434

Query: 806  GSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKK 862
              + + GG  DP+   NLF FGD DG G +  LQHPLGV +      +YVADSYNHKIK 
Sbjct: 435  AVKHVVGGERDPL---NLFAFGDVDGKGIDAKLQHPLGVSWDEGRSLLYVADSYNHKIKV 491

Query: 863  LDPASNRVSTLAGIGKAGFKDGAA-LAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
            +DP + +   LAG G+AG   G   L +  +EP G+   + G  L++ADTNN+ I+ LDL
Sbjct: 492  VDPKTKQCMVLAGTGEAGNGIGPRFLESSFNEPGGLCVGEGGKLLYVADTNNHHIKVLDL 551

Query: 921  NKEE----PELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEG---NIYL 973
              +     P +   ++  +   T  + S  + R +    A  + +     + G    + L
Sbjct: 552  ETKTVSLFPIVGHQDVDAILKTTTNNTSAVKKRPKLPKSAPVLAMPSISISSGQSVTLLL 611

Query: 974  KISLPEEYHFSKEARSKFSVDVEP-----ENAVIIDPLDGNLSPEGSAVLHF--RRMSPS 1026
            K++LP     ++EA S +S+  E      E   +   +D +LS   S VL      +SP 
Sbjct: 612  KLALPAGTKLTEEAPSFWSLSAEGNEWLLEGRAVTGSID-DLSEPISIVLSIPVAPVSPD 670

Query: 1027 VSTGRISCKVYYC-KEDEVCLYKPLLFEVPF 1056
              T  +   +Y+C  E   C+ K + F+ P 
Sbjct: 671  -PTLTLDAWLYFCVSEGGACMMKTVSFKQPL 700


>gi|449670570|ref|XP_002158620.2| PREDICTED: NHL repeat-containing protein 2-like [Hydra
           magnipapillata]
          Length = 629

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/561 (43%), Positives = 341/561 (60%), Gaps = 38/561 (6%)

Query: 430 VPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-F 487
           VPEF     WLN    LQF +DLKGK+ VLDF+TYCCINCMH+LPDL  LE+ +      
Sbjct: 41  VPEFDFGFQWLNVKEKLQFNKDLKGKLCVLDFFTYCCINCMHILPDLHDLEESFSVQDGL 100

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            V+G+HSAKF NEK L  I +AV+RY ISHPVVND +  LW E+ +  WPT  VV P G+
Sbjct: 101 VVLGIHSAKFQNEKILSNILSAVIRYDISHPVVNDPNAVLWNEMNIQCWPTLVVVSPIGQ 160

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
           +L  L GEGHR  L + VE AL  Y  K LL +  LP+ LEK +   L    L++PGKL 
Sbjct: 161 VLLYLVGEGHRNFLFNFVEFALKKYRNKGLLSSHALPIQLEKSS---LKFKNLRYPGKLT 217

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
                  L +SDS H+++++ + +G  + +IG +G  G +DG    + F+ PQGL++   
Sbjct: 218 ASPCGKMLAVSDSGHHQVLIIERNGYVVKRIG-TGFPGFKDGEAHVSQFSSPQGLSW--I 274

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP-- 725
           +N+++VADTENH++REI+  N   +T+ GNG +G D +GG+ G  Q ++SPWDV      
Sbjct: 275 ENVIFVADTENHSIREINVANWITKTIVGNGKQGKDKEGGKLGIEQEISSPWDVVVGASP 334

Query: 726 -------INEKVYIAMAGQHQIWEHSTVDG-----------VTRAFSGDGYERNLNGSSS 767
                  +N  +YIA+AG HQIW +   DG           V   F+G G E N N S  
Sbjct: 335 GSDTTDCVNNCLYIAVAGTHQIWCYFLKDGLWLKKGHQKKEVALRFAGSGEEENRNNSYP 394

Query: 768 LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
              SFAQPSG+++  +  +++VADSESSSIR+++LKTG  + + G D   P NLF +GD 
Sbjct: 395 TKASFAQPSGLAIIKN--QLFVADSESSSIRSVDLKTGAVKGVVGADRD-PTNLFSYGDV 451

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
           DG+G    LQHPL V  A NG +YVADSYNHKIK ++ ++   +TLAG G  G K+G  L
Sbjct: 452 DGIGLNAKLQHPLDV-AAVNGHLYVADSYNHKIKVVNMSNLSCTTLAGNGVVGIKNGDFL 510

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL-NKEEPELQTLELKGVQP-PTPKSRSP 945
           +A+ +EP GII   +  ++IADTNN++IR L+L  +    L+ LE       P   S++ 
Sbjct: 511 SAEFNEPGGII-CLDDTIYIADTNNHLIRVLNLTTRLVSTLEILETDNFDGFPVAVSKTS 569

Query: 946 KRLRRRSSPDAQTIVVDGGLS 966
           ++L   +  +   + V G LS
Sbjct: 570 EKL---AHDNLAMLSVSGSLS 587


>gi|119509213|ref|ZP_01628363.1| NHL repeat protein [Nodularia spumigena CCY9414]
 gi|119466055|gb|EAW46942.1| NHL repeat protein [Nodularia spumigena CCY9414]
          Length = 502

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/517 (44%), Positives = 327/517 (63%), Gaps = 26/517 (5%)

Query: 427 TPIV--PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           TP V  PE P    WLNT  PL  + +LKG+VV+LDFWTYCCINC+H+LPDL++LE+KY+
Sbjct: 2   TPRVRAPELPQNYTWLNTDKPLSLK-ELKGRVVILDFWTYCCINCLHILPDLKYLEQKYQ 60

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D   TV+GVHSAKFDNEK++E IR A+LRY I HPV+ D D  +W E  V +WPTF ++ 
Sbjct: 61  D-SLTVIGVHSAKFDNEKEIENIRQAILRYDIEHPVLVDRDFRVWEEYTVRAWPTFMIID 119

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFP 603
           P G ++  L+GEG R  LD+L++  +  + +K  ++   + ++LEK    +  T+PL FP
Sbjct: 120 PEGYVVGYLSGEGKRDSLDELIQQLISEHQEKGTINFQEISVTLEKQR--QALTTPLAFP 177

Query: 604 GKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
           GK+        LFI+DS H+R+V++  DG  +  IG +G+ GL DG+F++A F  PQG+A
Sbjct: 178 GKVLATPAG--LFIADSGHHRVVMSSYDGEILHLIG-TGKSGLTDGAFNEAQFFAPQGMA 234

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD-YQGGEKGTSQLLNSPWDVC 722
           ++ +  +LYVADTENH LR +D     V+T+AG G +  + Y  G  G    LNSPWDV 
Sbjct: 235 FDPENQMLYVADTENHTLRRVDLKRQIVKTIAGTGEQSRNIYPHGGAGIETALNSPWDVV 294

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
              + + ++IAMAG HQIW+ +   G+ + ++G G E  ++G  + ++ FAQPSGI+ + 
Sbjct: 295 --QLGQTLFIAMAGSHQIWQMNLESGIVKTYAGTGAEACIDGLLT-DSVFAQPSGITTNG 351

Query: 783 DFMEIYVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              E+Y+ADSE SSIR + LK     R + G        LF FGD  G G  V LQH LG
Sbjct: 352 --QELYIADSEVSSIRGVGLKEPQQVRSICGS-----KQLFGFGDVHGQGENVRLQHCLG 404

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           V  A+N  ++VAD+YNHKIK + P++    T+ G G AG +DG     +  EP+G +   
Sbjct: 405 VEYAQN-YLWVADTYNHKIKLVSPSTGNCQTILGDGSAGLQDGQGQNTRFFEPSG-LSVM 462

Query: 902 NGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
              L+I+DTNN+ IR  DLNK   E+ TL+  G+  P
Sbjct: 463 GDYLYISDTNNHAIRRGDLNKF--EVTTLKFPGLCAP 497


>gi|354501729|ref|XP_003512941.1| PREDICTED: NHL repeat-containing protein 2 [Cricetulus griseus]
          Length = 699

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 260/662 (39%), Positives = 377/662 (56%), Gaps = 56/662 (8%)

Query: 437  LDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHS 494
            L+WLNT  PL   +DL GKVVVLDF+TYCCINC+HVLPDL  LE+++ D     +VGVHS
Sbjct: 35   LEWLNTEEPLSVYKDLCGKVVVLDFFTYCCINCIHVLPDLHALERRFSDTDGLLIVGVHS 94

Query: 495  AKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAG 554
            AKF NEK L+ I++AVLRY I+HPVVND D +LW+EL V+ WPT  ++GP G +L  L G
Sbjct: 95   AKFPNEKVLDNIKSAVLRYNITHPVVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIG 154

Query: 555  EGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR 614
            EGH+  L      AL +Y  +  + +  + + L K++ P    SPL FPGK+A+D    R
Sbjct: 155  EGHKDKLFLYTSMALKYYKDRGQIRDGKIGIKLFKESLP---LSPLLFPGKVAVDHATGR 211

Query: 615  LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
            L ++D+ H+RI+V   +G     IG     G +DG F +++FN PQG+A     N++YVA
Sbjct: 212  LVVADTGHHRILVIQKNGQIECSIGGP-NPGRKDGMFSESSFNSPQGVAI--VNNVIYVA 268

Query: 675  DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI------NE 728
            DTENH +R+ID   + V T+AG G +G+D +GGE+G  Q ++SPWDV           N+
Sbjct: 269  DTENHLIRKIDLEAEKVSTVAGVGVQGTDTEGGERGEKQPISSPWDVVVGTSDSEVQRND 328

Query: 729  KVYIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
             ++IAMAG HQIW           +     G    F+G G E N N +      FAQPSG
Sbjct: 329  ILWIAMAGTHQIWALLLDSGTLPKKSELKKGTCLRFAGSGNEENRNNAYPHKAGFAQPSG 388

Query: 778  ISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGG--DPIFPDNLFKFGDRDGMGSE 833
            +SL+ +  +  ++VADSESS++R+++LK G  + L GG  DP+   NLF FGD DG+G  
Sbjct: 389  LSLASEDPWSCLFVADSESSTVRSVSLKDGAVKHLVGGERDPM---NLFAFGDADGVGII 445

Query: 834  VLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
              LQHPLGV +  K   +YVADSYNHKIK +DP +   +TLAG G A     +   +  +
Sbjct: 446  AKLQHPLGVAWDQKRSLLYVADSYNHKIKVVDPKTKLCTTLAGTGVANDVVCSFAESAFN 505

Query: 893  EPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP----------TPK 941
            EP G+    +G  L++ADTNN+ I+ +DL     E +T+ +  +  P          T K
Sbjct: 506  EPGGLCVGDSGRLLYVADTNNHQIKVMDL-----EARTVSVLPILKPGSVVVDGPFATEK 560

Query: 942  SRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAV 1001
             ++  ++  +S+P+ Q   V         + LK+ LP     ++   S + +  E    +
Sbjct: 561  QKTAPKV-PKSAPNIQLPPVPVCPGQTLQLKLKLDLPPGAKLTEGVASCWFLTAEGNEWL 619

Query: 1002 IIDPLDG----NLSPEGSAVLHFRRMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVP 1055
            + + +      N+S + +  L       S+ +   +S  +YYC  D   C+ K +LF  P
Sbjct: 620  LQEQIPSGNIENISNQPTISLQIPAECLSLEAVISVSVFLYYCSADSSACMMKAILFRQP 679

Query: 1056 FQ 1057
              
Sbjct: 680  LH 681


>gi|348578653|ref|XP_003475097.1| PREDICTED: NHL repeat-containing protein 2-like [Cavia porcellus]
          Length = 726

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 264/694 (38%), Positives = 377/694 (54%), Gaps = 57/694 (8%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEF   L+WLNT  PL   +DL GKVV+LDF++YC
Sbjct: 30   TQQEKDDLVYQYLQKVDGWEQDLSVPEFEEGLEWLNTEEPLSLYKDLCGKVVILDFFSYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  + D     +VGVHSAKF NEK L+ I +AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHELEHVFSDKDGLLIVGVHSAKFPNEKVLDNITSAVLRYNITHPVVNDV 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+++D   N L ++D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKISVDHATNTLVMADTGHHRILVIWENGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++ FN PQG+A     N+++VADTENH +R+ID + + V T+AG G +G+D
Sbjct: 266  PGRKDGLFSESAFNSPQGVAM--MDNIIFVADTENHLIRKIDLIAEKVSTVAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTV 746
             +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW           ++   
Sbjct: 324  KEGGAKGEEQPISSPWDVAFGTSGSEVQRNNILWIAMAGIHQIWALLLDFGKLPKKNELK 383

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKT 804
             G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK 
Sbjct: 384  KGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWNCLFVADSESSTVRTVSLKD 443

Query: 805  GGSRLLAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
            G  + L GG  DP+   NLF FGD DG+G +  LQHPLGV +  K   +YVADSYNHKIK
Sbjct: 444  GAVKHLIGGERDPM---NLFAFGDADGVGIDAKLQHPLGVAWDKKRNLLYVADSYNHKIK 500

Query: 862  KLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
             +DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +D
Sbjct: 501  VVDPKTKNCTTLAGTGNTNNVTSSSFTESTFNEPGGLCVGENGRLLYVADTNNHQIKVMD 560

Query: 920  LNKEE----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            L  +     P  ++          LE   + P  P+S    RL   +    QT+     L
Sbjct: 561  LETKTISVLPIFKSENAVVDGPLLLEKPKIVPKLPRSAPTIRLSPVTVCPGQTLQFKLRL 620

Query: 966  SNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSP 1025
                   L   +P  +  + E          P   +       N+S + + +L       
Sbjct: 621  DLPPGSKLTDGVPSCWFLAAEGNEWLLQGQIPSGDI------ENISNQPTILLQIPGNCL 674

Query: 1026 SVSTG-RISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            S+     I   +YYC  D   C+   +LF  P Q
Sbjct: 675  SLEVVLSIRVFLYYCSADSSACMMHGILFSQPLQ 708


>gi|325106982|ref|YP_004268050.1| redoxin [Planctomyces brasiliensis DSM 5305]
 gi|324967250|gb|ADY58028.1| Redoxin domain protein [Planctomyces brasiliensis DSM 5305]
          Length = 563

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/519 (44%), Positives = 317/519 (61%), Gaps = 30/519 (5%)

Query: 433 FPAKLD---------WLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           FP + D         WLNT  PL +R DL+GKVVV+DFWTYCCINCMHVLPDLE+LE KY
Sbjct: 62  FPQRFDAPSLDGGKGWLNTKQPLSWR-DLRGKVVVIDFWTYCCINCMHVLPDLEYLENKY 120

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
            +    V+GVHSAKF+NE+D  AIR+A+ RY I HPV+ND DM +WR+ G  SWPT  V+
Sbjct: 121 -EKELVVIGVHSAKFENEQDTSAIRSAIQRYEIKHPVINDADMTVWRKFGARSWPTLVVI 179

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P GK +  L+GEG+R  LD+++   + ++ +K  L+  P+   LE D   +L  +PL+F
Sbjct: 180 DPEGKYIGYLSGEGNRDVLDNVIGKLVDYHREKGTLNEEPIKFDLEAD---KLENTPLRF 236

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK+  D    RLFI+DSNHNRI++  LDG     IG +G+ G +DGS++ A+F+ PQG+
Sbjct: 237 PGKVLADAAGKRLFIADSNHNRIIIAGLDGQLQAVIG-TGKIGRQDGSYEQASFDHPQGM 295

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A     N LYVADTENH LR ID  +  V TLAG G +     GG       LNSPW   
Sbjct: 296 ALVG--NTLYVADTENHLLRTIDLESKQVATLAGTGEQARFRAGGGSLAETALNSPW--A 351

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
            + +N  +YIAMAG HQ+W+H         F+G G E  ++GS +  ++ AQPSGI+   
Sbjct: 352 LQELNGTLYIAMAGPHQLWKHQLGSQEISVFAGSGREDIIDGSLA-ESALAQPSGITT-- 408

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP--DNLFKFGDRDGMGSEVLLQHPL 840
           D   ++  DSE S+IR     +  +     G    P   +LF+F D DG+G+E   QHPL
Sbjct: 409 DGESLFFVDSEGSAIRKTGTASDTTVNTLAGPHDLPRGRSLFEFADIDGVGAEARFQHPL 468

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           G+   ++G +YVADSYNHKI+ ++ A+ +V++  G G+AG  D      Q SEP G +  
Sbjct: 469 GI-AYRDGLLYVADSYNHKIRLVETATGKVTSFLGTGEAG--DSLEADVQFSEPGG-LSI 524

Query: 901 QNGNLFIADTNNNIIRYLDL-NKEEPELQTLELKGVQPP 938
               L++ADTNN+ I  ++L +K   E Q  EL   Q P
Sbjct: 525 SGDTLYVADTNNHRILTINLQDKSVSEFQIPELTSPQAP 563


>gi|334116916|ref|ZP_08491008.1| NHL repeat containing protein [Microcoleus vaginatus FGP-2]
 gi|333461736|gb|EGK90341.1| NHL repeat containing protein [Microcoleus vaginatus FGP-2]
          Length = 546

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/553 (43%), Positives = 331/553 (59%), Gaps = 64/553 (11%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PEFP    WLNT  PL     LKG+VV+LDFWTYCCINC+HVLPDL++LE+KYKD   TV
Sbjct: 7   PEFPGNYPWLNTDKPLSIE-SLKGRVVLLDFWTYCCINCLHVLPDLKYLEQKYKD-SLTV 64

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKF+NEK++E IR A+LRY I HPV+ D  M +W+   V +WPT  V+ P   ++
Sbjct: 65  IGVHSAKFENEKEVENIRQAILRYDIEHPVIVDSGMKVWQSYAVRAWPTLMVIDPESYVV 124

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKL--- 606
             ++GEG+R+ LD+LV   +  Y  K  L    L  SLEK   P   ++PL FPGK+   
Sbjct: 125 GFVSGEGNREALDELVGKLIAEYKDKNALKFKQLTFSLEKQRKP--VSTPLAFPGKVLAF 182

Query: 607 -------------------------AID--------------ILNNRLFISDSNHNRIVV 627
                                    ++D              ++ + LFI+DS HNRIVV
Sbjct: 183 AIAATEAKQLHQQGALLGEMSQGNESVDETVLPGPANSVIQNLVGSCLFIADSGHNRIVV 242

Query: 628 TDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFV 687
           + L+G  +  IGS G+ GL DG F++A F  PQG+A++A+  +LYVADTENHALR+IDF 
Sbjct: 243 STLEGEVLHVIGS-GQPGLTDGDFEEAEFFAPQGMAFDAESQILYVADTENHALRKIDFT 301

Query: 688 NDTVRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
              V T+AG G +  +      KG    LNSPWD+  + +  +++IAMAG HQIWE    
Sbjct: 302 TQRVETVAGTGEQSHEISPRSGKGLETQLNSPWDL--ERVGNRLFIAMAGSHQIWEMQLD 359

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
            G    ++G G E  ++G+ +  ++F+QPSG  L+ D  E++VADSE SSIRA+ +    
Sbjct: 360 TGTIGTYAGIGRESCVDGNLA-ESAFSQPSG--LATDRSELFVADSEISSIRAVGIDEDP 416

Query: 807 S-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
             R + G        LF FGD+DG G EV LQH LGV  A+N  ++VAD+YNHKIK++D 
Sbjct: 417 KVRTVCGSG-----ELFGFGDKDGRGDEVRLQHCLGVEYAQN-YLWVADTYNHKIKRIDH 470

Query: 866 ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEP 925
                 T+ G G AG  D   L A+  EP+G + A   +LF+ADTNN++IR ++L+    
Sbjct: 471 RGGTCRTMIGEGTAGLVDAKGLKARFFEPSG-LSAIGPHLFVADTNNHVIRRVELDT--L 527

Query: 926 ELQTLELKGVQPP 938
           E+ TL+  G+  P
Sbjct: 528 EVTTLDFPGLCAP 540


>gi|47219684|emb|CAG12606.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 805

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 249/568 (43%), Positives = 325/568 (57%), Gaps = 59/568 (10%)

Query: 405 SSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTY 463
           S+Q E+      Y+  ++ R    I P+F   L+W+NT  PL   ++L GKVV+LDF+TY
Sbjct: 25  STQQEKEDLVYQYLKTLDGRDDLKI-PDFQPALEWINTEGPLSLHKELAGKVVLLDFFTY 83

Query: 464 CCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           CCINC+H+LPDL  LEK++  +    VVGVHSAKF NEK L+ IR+AVLRY I HPVVND
Sbjct: 84  CCINCLHILPDLHQLEKQHSAEDGLVVVGVHSAKFPNEKVLDNIRSAVLRYNICHPVVND 143

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTP 582
            +  LW  L V+ WPT   +GP G LL  L GEGH        +AAL +Y ++ LL    
Sbjct: 144 SEACLWHALEVSCWPTLVFLGPRGNLLFSLVGEGHWDKQMLFTDAALRYYRERGLLRTHA 203

Query: 583 LPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG 642
           +PL L +D+ P    S L FPGK+AID  + R+ I+D+ H+R+++    G  +  IG   
Sbjct: 204 VPLKLLRDSLP---PSILSFPGKIAIDDRSKRVAIADTGHHRVLLVSTTGQLLQVIGGP- 259

Query: 643 EEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALR-------------------- 682
           E G +DG   +A+FN PQG+A   K + +YVADTENH +R                    
Sbjct: 260 ESGRKDGDLSEASFNSPQGVAI--KGDTVYVADTENHLIRKVQLITASLCSTLPSRCLSP 317

Query: 683 ---------EIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN----EK 729
                    +ID     V TLAG G +G+D +GG  G  Q ++SPWDV            
Sbjct: 318 CLNASVCIYQIDLSAGKVSTLAGTGAQGTDKEGGAPGPRQPISSPWDVTLGSAGGDEANV 377

Query: 730 VYIAMAGQHQIWEHSTVD-----------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
           ++IAMAG HQIW     D           G    ++G G E N N S     SFAQPSG+
Sbjct: 378 LWIAMAGTHQIWALFLADGKLPKGSEVKAGTCVRWAGSGNEENRNNSYPHKASFAQPSGL 437

Query: 779 SLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           +L+P+  +  +YVADSESS+IR L LK G  + L GG+   P NLF FGD DG G +  L
Sbjct: 438 ALAPEEPWSCLYVADSESSTIRTLALKDGAVKSLVGGERD-PMNLFAFGDVDGKGVDAKL 496

Query: 837 QHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL-SEP 894
           QHPL V  A     +YVADSYNHKIK +DP + R STLAG G+AG   G A    L +EP
Sbjct: 497 QHPLAVAWAPGASLLYVADSYNHKIKVVDPKAKRCSTLAGTGEAGDTLGPAFHQCLFNEP 556

Query: 895 AGIIEAQNGN-LFIADTNNNIIRYLDLN 921
           AGI     G  L++ADTNN+ +  LDL+
Sbjct: 557 AGICIGGGGKLLYVADTNNHRVAVLDLD 584



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 579 DNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI 638
           +  P+ L    D D +   + L+ P  +A     + L+++DS +++I V D        +
Sbjct: 475 ERDPMNLFAFGDVDGKGVDAKLQHPLAVAWAPGASLLYVADSYNHKIKVVDPKAKRCSTL 534

Query: 639 GSSGEEGLRDG-SFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691
             +GE G   G +F    FN P G+       LLYVADT NH +  +D  + TV
Sbjct: 535 AGTGEAGDTLGPAFHQCLFNEPAGICIGGGGKLLYVADTNNHRVAVLDLDSRTV 588


>gi|186683945|ref|YP_001867141.1| redoxin domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186466397|gb|ACC82198.1| Redoxin domain protein [Nostoc punctiforme PCC 73102]
          Length = 509

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/512 (44%), Positives = 324/512 (63%), Gaps = 27/512 (5%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    W NT  PL  ++ LKG+V++LDFWTYCCINC+H+LP+L++LE+KYKD   T+
Sbjct: 8   PELPHNYSWFNTDKPLSLKQ-LKGRVIILDFWTYCCINCLHILPNLKYLEQKYKD-SLTI 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFDNEK+ E IR A+LRY + HPV+ D +  LW E  V +WPT  ++ P G ++
Sbjct: 66  IGVHSAKFDNEKETENIRQAILRYDVEHPVIIDSNFRLWEEYAVRAWPTLIIIDPEGYVI 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            Q++GEG+R  LD+L++  +  +  K  ++   L L LEK   P +  +PL FPGK+   
Sbjct: 126 GQISGEGNRDALDELIQKLIQQHQDKGTINFQELSLILEKQRQPLI--TPLAFPGKVLAT 183

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
                LFI+DS H+R++++  DG  +  IG +G+ GL DG+F++A F  PQG+AY+A+  
Sbjct: 184 --QTGLFIADSGHHRLIMSSFDGEILHLIG-TGKSGLTDGAFNEAQFFAPQGMAYDAENQ 240

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSD-YQGGEKGTSQLLNSPWDVCYKPINE 728
           +LYVADTENH LR +D     V  +AG G +  + +  G  G    LNSPWD+    +  
Sbjct: 241 ILYVADTENHTLRRVDMKRQVVDAIAGTGEQSRNIHPHGGVGLETPLNSPWDLV--KVGN 298

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            ++IAMAG HQIWE      + + ++G G E  ++GS +  ++FAQPSGI  S D  E+Y
Sbjct: 299 TLFIAMAGPHQIWEMDLETSMIKTYAGTGAEACIDGSLT-ESAFAQPSGI--STDGKELY 355

Query: 789 VADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +ADSE SSIR + + +    R + G        LF FGD DG G +V LQH LGV  A+N
Sbjct: 356 IADSEVSSIRGVGIVEPYQVRTVCGS-----GGLFGFGDVDGQGEDVRLQHCLGVEFAQN 410

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LF 906
             I+V D+YNHKIK + P+ N   T+ G G AG +DG    ++  EP+G+  + NG+ L+
Sbjct: 411 F-IWVTDTYNHKIKLVSPSGN-CQTIQGDGTAGLQDGQGKNSRFFEPSGL--SINGSYLY 466

Query: 907 IADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           IADTNN+ IR +DLN    E+ TLE  G+  P
Sbjct: 467 IADTNNHAIRRVDLNT--LEVTTLEFFGLCAP 496


>gi|17228508|ref|NP_485056.1| hypothetical protein alr1013 [Nostoc sp. PCC 7120]
 gi|17130359|dbj|BAB72970.1| alr1013 [Nostoc sp. PCC 7120]
          Length = 503

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/511 (44%), Positives = 322/511 (63%), Gaps = 26/511 (5%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    WLNT  PL  ++ L G+VV+LDFWTYCCINC+HVLPDL++LE+KYKD   TV
Sbjct: 8   PELPQNYPWLNTEQPLSIKQ-LNGRVVILDFWTYCCINCLHVLPDLKYLEQKYKD-SLTV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFDNE++ E IR A+LRY I HPV+ D D  +W+E  V +WPT  V+ P G ++
Sbjct: 66  IGVHSAKFDNEQETENIRQAILRYDIEHPVLVDKDFRVWQEYAVRAWPTLMVIDPKGYVI 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
             ++GEG+R  LD L+   +  +  +  ++   L L+LEK   P    +PL FPGK+   
Sbjct: 126 GYVSGEGNRDKLDQLITQVIQEH--QGAINFQQLSLTLEKQRQP--LITPLAFPGKVLAT 181

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
              + LF++DS H+RIVV+D +G  +  IG +G+ GL DG+F +A F+ PQG+A++ +  
Sbjct: 182 --PSGLFVADSGHHRIVVSDFNGEILHLIG-NGKSGLTDGNFQEAQFSAPQGMAFDMENQ 238

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWDVCYKPINE 728
           +LY+ADTENHALR +D    TV T+AG G +  + Q  G  G    LNSPWD+    I  
Sbjct: 239 ILYLADTENHALRRVDINQQTVETIAGTGEQSRNIQPHGGVGLETALNSPWDLV--NIEN 296

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            +YIAMAG HQIW+     GV + ++G G E  L+ S +  ++FAQPSGI  + +  E+Y
Sbjct: 297 SLYIAMAGVHQIWQMDLASGVIKTYAGTGVEACLDASLT-ESAFAQPSGI--TNNEQELY 353

Query: 789 VADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +ADSE SSIR + L +    R + G        LF FGD DG G +V LQH LGV   +N
Sbjct: 354 IADSEISSIRGVGLVEPQEVRTVCGS-----GGLFGFGDVDGQGEDVRLQHCLGVEYFQN 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             ++VAD+YNHKIK + P +    T+ G G AG ++G     +  EP+G + A +  L+I
Sbjct: 409 -YLWVADTYNHKIKSVSPHTGNCQTVLGDGLAGLQNGQGKNTRFFEPSG-LSAIDSYLYI 466

Query: 908 ADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           +DTNN++IR +DL     E+ T++  G+  P
Sbjct: 467 SDTNNHVIRRVDLRT--LEVTTMQFNGLCAP 495



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 606 LAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           L ++   N L+++D+ NH    V+   GN    +G  G  GL++G   +  F  P GL+ 
Sbjct: 401 LGVEYFQNYLWVADTYNHKIKSVSPHTGNCQTVLGD-GLAGLQNGQGKNTRFFEPSGLS- 458

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            A  + LY++DT NH +R +D     V T+  NG    D
Sbjct: 459 -AIDSYLYISDTNNHVIRRVDLRTLEVTTMQFNGLCAPD 496


>gi|428317077|ref|YP_007114959.1| NHL repeat containing protein [Oscillatoria nigro-viridis PCC 7112]
 gi|428240757|gb|AFZ06543.1| NHL repeat containing protein [Oscillatoria nigro-viridis PCC 7112]
          Length = 546

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/552 (43%), Positives = 327/552 (59%), Gaps = 62/552 (11%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEFP    WLNT        LKG+VV+LDFWTYCCINC+HVLPDL++LE+KYKD   TV+
Sbjct: 7   PEFPGNYPWLNTEKPLSIESLKGRVVLLDFWTYCCINCLHVLPDLKYLEQKYKD-SLTVI 65

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHSAKF+NEK++E IR A+LRY I HPV+ D  M +W+   V +WPT  V+ P   ++ 
Sbjct: 66  GVHSAKFENEKEVENIRQAILRYDIEHPVIVDSGMKVWQSYAVRAWPTLMVIDPESYVVG 125

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKL---A 607
            ++GEG+R+ LD+LV   +  Y  K  L    L  SLEK   P   ++PL FPGK+   A
Sbjct: 126 FVSGEGNREALDELVGKLIAEYKDKNALKFKQLSFSLEKQRKP--VSTPLAFPGKVLAFA 183

Query: 608 I---------------------------------------DILNNRLFISDSNHNRIVVT 628
           I                                       +++ + LFI+DS HNRIVV+
Sbjct: 184 IAATEAKHLHQQVALLGEMSQENEFVDETVLPGPANSVIQNLVGSCLFIADSGHNRIVVS 243

Query: 629 DLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN 688
            L+G  +  IGS G+ GL DG F++A F  PQG+A++A+  +LYVADTENHALR+IDF  
Sbjct: 244 TLEGEVLHVIGS-GKPGLTDGDFEEAEFFAPQGMAFDAESQILYVADTENHALRKIDFTT 302

Query: 689 DTVRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD 747
             V T+AG G +  +      KG    LNSPWD+  + +  +++IAMAG HQIWE     
Sbjct: 303 QRVETVAGTGEQSHEISPRSGKGLETQLNSPWDL--ERVGNRLFIAMAGSHQIWEMQLDT 360

Query: 748 GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS 807
           G    ++G G E  ++G+ +  ++F+QPSG  L+ D  E++VADSE SSIRA+ +     
Sbjct: 361 GTIGTYAGIGRESCVDGNLA-ESAFSQPSG--LATDRSELFVADSEISSIRAVGIDEDPK 417

Query: 808 -RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
            R + G        LF FGD+DG   +V LQH LGV  A+N  ++VAD+YNHKIK++D  
Sbjct: 418 VRTVCGSG-----ELFGFGDKDGRADQVRLQHCLGVEYAQN-YLWVADTYNHKIKRIDHR 471

Query: 867 SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPE 926
                T+ G G AG  D   L A+  EP+G + A   +LF+ADTNN++IR ++L+    E
Sbjct: 472 GGTCRTMIGDGTAGLVDAKGLKARFFEPSG-LSAIGPHLFVADTNNHVIRRVELDT--LE 528

Query: 927 LQTLELKGVQPP 938
           + TL    + PP
Sbjct: 529 VTTLNFPSLCPP 540


>gi|283781091|ref|YP_003371846.1| NHL repeat containing protein [Pirellula staleyi DSM 6068]
 gi|283439544|gb|ADB17986.1| NHL repeat containing protein [Pirellula staleyi DSM 6068]
          Length = 782

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 268/661 (40%), Positives = 372/661 (56%), Gaps = 57/661 (8%)

Query: 430  VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
            +P+FP  ++W+NT  L  +RD+KGK V+LDFWTYCCINCMHVLP+L+ LEKKY +    V
Sbjct: 128  LPDFPKDMEWINTGALS-KRDIKGKFVLLDFWTYCCINCMHVLPELKKLEKKYPNE-LVV 185

Query: 490  VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
            +GVHSAKFD EKD   IR+AVLRY + HPVVND +  +W   GV+SWPT  +V P G  +
Sbjct: 186  IGVHSAKFDTEKDAANIRSAVLRYEVEHPVVNDAEHEIWNMCGVSSWPTVLLVDPEGFAV 245

Query: 550  AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
               AGE   +++  ++E A  +Y  KKLLD  P+   LE + +     +PL+FPGK+  D
Sbjct: 246  WGRAGEFKFEEVQAVIERAKPYYIAKKLLDEKPIKFPLESEKE---APTPLRFPGKILAD 302

Query: 610  ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
                RLFISDSNHNRIV+T LDG  I  IG SG  G  DGSF +A+F+ PQG A + +  
Sbjct: 303  AAGQRLFISDSNHNRIVITSLDGKLIETIG-SGVIGKADGSFAEASFDHPQGCALDGET- 360

Query: 670  LLYVADTENHALREIDFVNDTVRTLAGNGTKG-SDYQGGE--KGTSQL------------ 714
             LYVADTENH LR+ID    TV T+AG G +  S + G E  + T+++            
Sbjct: 361  -LYVADTENHLLRKIDLTKKTVTTIAGTGKQAESAWPGIEEVRLTAEVPERWVGPPKTTG 419

Query: 715  LNSPWDVCYKPINEK-VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS-------S 766
            +NSPW +    ++EK +YIAMAG HQIW+    +     ++G+G E  ++G        +
Sbjct: 420  INSPWALW---VHEKNLYIAMAGPHQIWKMPLDESEIGPYAGNGREDIVDGPLIPKVPYT 476

Query: 767  SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFG 825
               +SFAQPSG  LS D   ++VADSE SSIRA+    T   R + G   +    LF FG
Sbjct: 477  EGFSSFAQPSG--LSSDGEWLFVADSEGSSIRAVPFDPTKEVRTIVGTSELPGGRLFDFG 534

Query: 826  DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            D DG      LQH L V  ++ G+IYVAD+YN+KIK +D  +  V T+AG G  G  D  
Sbjct: 535  DVDGPRERAKLQHALEVVYSE-GKIYVADTYNNKIKLVDAKTGEVKTIAGSGSPGTSDD- 592

Query: 886  ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT-PKSRS 944
               A   EPAG+       L++ADTNN++IR +D+     +  TL ++G+ PP  P +  
Sbjct: 593  --PATFDEPAGLALVGE-TLYVADTNNHLIRKVDVATG--KTSTLTIEGLTPPQKPVAAK 647

Query: 945  PKRLRRRSSPDAQTIV---VDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAV 1001
                        +T+    VDG ++    + +K+ LPE +  +  A   + VD+  E+  
Sbjct: 648  TPDFSSAKVEKLETVTLKPVDGKVT----LQVKLVLPEGWKTNPLAPMSYYVDLAGESGP 703

Query: 1002 I---IDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYC-KEDE-VCLYKPLLFEVPF 1056
            +           +P  +  +     S       IS   YYC K DE VC    ++F+VP 
Sbjct: 704  VSRAAAGKKKLAAPTSTFAVELPVTSDGTDEVTISLNYYYCEKSDEGVCKIGSVVFKVPL 763

Query: 1057 Q 1057
            +
Sbjct: 764  K 764


>gi|37519956|ref|NP_923333.1| hypothetical protein gll0387 [Gloeobacter violaceus PCC 7421]
 gi|35210948|dbj|BAC88328.1| gll0387 [Gloeobacter violaceus PCC 7421]
          Length = 544

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/521 (45%), Positives = 325/521 (62%), Gaps = 36/521 (6%)

Query: 427 TPIV--PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           TP V  PE P K  WLNT  PL+ + +L+G+VV+LDFWTYCCINC+H+LPDL++LE KY+
Sbjct: 43  TPRVRAPELPPKFHWLNTDRPLRLK-ELRGRVVLLDFWTYCCINCLHILPDLKYLEDKYR 101

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D   TV+GVH+AKF NE+DL+ IR A+LR+ I HPV+ D    +W+   V +WPT  ++ 
Sbjct: 102 DS-LTVIGVHTAKFANEQDLDNIRRAILRHDIEHPVIVDESHTIWQSYTVRAWPTLVLID 160

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP----LSLEKDNDPRLFTSP 599
           P+G  +   +GEG+R  LD L+   +L    ++     PLP      LEK + P    +P
Sbjct: 161 PDGYYVGHASGEGNRDLLDQLIGELVL----RQTNQGRPLPGGLRTRLEKASAP---PTP 213

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L FPGKL   +  +RLF+SDS H+RIV + LDG+    IG SG  G RDG+F++A F  P
Sbjct: 214 LAFPGKLT--VYGDRLFVSDSGHHRIVTSSLDGSSHESIG-SGIPGWRDGNFEEAEFWAP 270

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNSP 718
           QGLA +A    L+V DTENH LR+ID V   V T AG G +   Y   E  G    LNSP
Sbjct: 271 QGLALSADGRTLFVCDTENHLLRKIDLVRRQVSTFAGTGEQSLGYGQVEGPGLEIPLNSP 330

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
           WD      +  +Y+AMAG HQIW+     G    F+G+G+E  LNG+    ++FAQPSGI
Sbjct: 331 WDAVVA--DGALYVAMAGSHQIWKCDPHSGRISTFAGNGHESTLNGTRD-GSAFAQPSGI 387

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
           + +     ++VADSESSS+R + +    + LL G       +LF FGD+DG+G  VLLQH
Sbjct: 388 TTND--HRLFVADSESSSVRTVGIAEDITALLCGS-----GDLFGFGDQDGLGEAVLLQH 440

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGII 898
           PLGV+    G +++ D+YNHKIK++DP S R  TL G   +G+ DG    A+  EPAG+ 
Sbjct: 441 PLGVHW-DGGTLWLTDTYNHKIKRIDPESGRCETLTGHIDSGYLDGDLAEARFWEPAGLW 499

Query: 899 EAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
             +NG+ ++IADTNN+ IR +DL      + TL+++ +  P
Sbjct: 500 --RNGDRIYIADTNNHAIRVIDLVSR--RVSTLKIRNLCAP 536


>gi|406832294|ref|ZP_11091888.1| NHL repeat containing protein [Schlesneria paludicola DSM 18645]
          Length = 707

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/525 (43%), Positives = 318/525 (60%), Gaps = 28/525 (5%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+    ++WLN++     +DL+GK+V++DFWT+CCINCMHVLPDL +LEKK+ +    VV
Sbjct: 64  PDLDGGVEWLNSSGPISIKDLRGKIVLIDFWTFCCINCMHVLPDLAYLEKKFPN-ELVVV 122

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHSAKFDNEK+   IRNA++RY I HPVVND +M +WR+ GV SWPT AV+ P G+   
Sbjct: 123 GVHSAKFDNEKETGNIRNAIVRYEIEHPVVNDANMTIWRKFGVRSWPTLAVIDPEGQYCG 182

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
            ++GEG+R+ L+ +VE  + ++  KK LD TPL   LE++   +  + PL++PGK+  D 
Sbjct: 183 FVSGEGNRELLEKVVEKLIAYHKSKKTLDETPLHFDLERN---KSVSEPLRYPGKILADA 239

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            N+RLFISDSNHNR++V  L G  I  IGS G  G +DG +  A F+ PQG+      + 
Sbjct: 240 ANDRLFISDSNHNRLIVCTLTGKLIDVIGS-GAIGHKDGGYAVAQFDHPQGMTLVG--DT 296

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           LYVADTENH LR ID     V T AG G +      G       LNSPWD+    ++  +
Sbjct: 297 LYVADTENHLLRAIDLKQKHVSTFAGVGEQARTRAPGGTLRETALNSPWDLTV--VDGVM 354

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           YIAMAG HQ+W H         ++G G E   NG     ++ AQPSGI    D   +YV 
Sbjct: 355 YIAMAGPHQVWAHKLGTNTLAQYAGSGREDITNGELD-QSALAQPSGIV--HDGQTLYVV 411

Query: 791 DSESSSIRALNLKT--------GGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
           DSE S++RA+            G    +AG  D     +LF+FG+ DG G EV  QHPLG
Sbjct: 412 DSEGSAVRAITTDAKNDLSDPKGMVTTIAGPHDLPRGRSLFEFGNIDGSGDEVRFQHPLG 471

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           +    +G ++VADSYNH+++++D  +  VST AG GK G +       Q +EPAG+  A 
Sbjct: 472 L-VHHDGSLFVADSYNHQVRQVDLKTRAVSTWAGTGKPGRE---LAPVQFAEPAGLAIA- 526

Query: 902 NGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPK 946
           NG L++ADTNN+ I  +DL  +      L ++G+  P+P +  P+
Sbjct: 527 NGTLYVADTNNHRIVLIDLATKNA--SELAIEGLTAPSPTADEPE 569


>gi|427719807|ref|YP_007067801.1| NHL repeat containing protein [Calothrix sp. PCC 7507]
 gi|427352243|gb|AFY34967.1| NHL repeat containing protein [Calothrix sp. PCC 7507]
          Length = 505

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/519 (43%), Positives = 326/519 (62%), Gaps = 30/519 (5%)

Query: 427 TPIV--PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           TP V  PE P    W NT  PL  + +LKG+VV+LDFWTYCCINC+H+LPDL++LE+KY+
Sbjct: 2   TPRVRAPELPQNYLWFNTDQPLSLK-ELKGRVVILDFWTYCCINCLHILPDLKYLEQKYR 60

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D   TV+GVHSAKFDNEK+ E IR A+LRY I HPV+ D D  +W+E  V +WPT  V+ 
Sbjct: 61  D-SLTVIGVHSAKFDNEKETENIRQAILRYDIEHPVLVDRDFRVWQEYTVRAWPTLVVID 119

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFP 603
           P   ++A ++GEG+R  LD+ +   +  + +K  L+   L L+LEK   P    +PL FP
Sbjct: 120 PESYVIASVSGEGNRDVLDEFIAKLINQHQEKGTLNFQELSLTLEKQRQP--LITPLAFP 177

Query: 604 GKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
           GK+      + LFI+DS H+R+V +  DG  +  IG +G+ G  DG F +A F  PQG+A
Sbjct: 178 GKVLATA--SGLFIADSGHHRLVRSSFDGEILHVIG-TGKPGFIDGDFSEAQFFAPQGMA 234

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD-YQGGEKGTSQLLNSPWDVC 722
           ++ +  +LY+ADTENHALR +D  +  V+T+AG G +  + +     G    LNSPWD+ 
Sbjct: 235 FDEENQILYIADTENHALRRVDLRHQLVKTIAGTGKQSRNIHPHSGAGLETELNSPWDLV 294

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
              +   ++IAMAG HQIW+     G+   ++G G E  ++GS +  ++FAQPSGI  + 
Sbjct: 295 --KVGNNLFIAMAGPHQIWQMDLETGIINTYAGTGAEACVDGSLT-ESAFAQPSGI--TT 349

Query: 783 DFMEIYVADSESSSIRALNL---KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           D  E+Y+ADSE SSIR++ +   +   +   +GG       LF FGD DG G  V LQH 
Sbjct: 350 DGKELYIADSEVSSIRSVGIVEPRQVKTVCGSGG-------LFSFGDVDGQGENVRLQHC 402

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV  A+N  ++VAD+YNHKIK + P++    T+ G G AG +DG    ++  EP+G + 
Sbjct: 403 LGVEYAQN-YLWVADTYNHKIKLVSPSTRNCQTVLGDGSAGLQDGEGKNSRFFEPSG-LS 460

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
             N +L++ADTNN++IR +DLN    E+ TL+  G+  P
Sbjct: 461 VINSHLYVADTNNHVIRRVDLNTF--EVTTLKFPGLCAP 497



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
           L ++   N L+++D+ +++I +          +   G  GL+DG   ++ F  P GL+  
Sbjct: 403 LGVEYAQNYLWVADTYNHKIKLVSPSTRNCQTVLGDGSAGLQDGEGKNSRFFEPSGLS-- 460

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
              + LYVADT NH +R +D     V TL   G    D
Sbjct: 461 VINSHLYVADTNNHVIRRVDLNTFEVTTLKFPGLCAPD 498


>gi|296124331|ref|YP_003632109.1| NHL repeat containing protein [Planctomyces limnophilus DSM 3776]
 gi|296016671|gb|ADG69910.1| NHL repeat containing protein [Planctomyces limnophilus DSM 3776]
          Length = 581

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/522 (45%), Positives = 317/522 (60%), Gaps = 34/522 (6%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLNT+     +DL+GKVVVLDFWTYCCINC+HVLPDL++LEKKY      V+
Sbjct: 82  PSLDGGIEWLNTSQPLSLKDLRGKVVVLDFWTYCCINCIHVLPDLKYLEKKYGK-ELVVI 140

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHSAKFDNEK+   IR A+LRY I HPVVND +M +WR+  + SWP+  ++ P G+   
Sbjct: 141 GVHSAKFDNEKESGNIRKAILRYEIEHPVVNDAEMTIWRKFSIRSWPSLVLIDPEGQFCG 200

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
             +GEG+R+ LD ++   + ++  K  L+  P+   LE   +     +PL+FPGKL +D 
Sbjct: 201 VASGEGNRELLDQVIAKVIDYHRAKGTLNEKPMAFDLESGKEA---ATPLRFPGKLLVDP 257

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            + R+FISDSNHNRIVV  L G  +  IG SG+ G +DG  + A F+ PQG+A +   N 
Sbjct: 258 AHERVFISDSNHNRIVVASLAGQLLKVIG-SGKIGAKDGPAESAQFDHPQGMALDG--NT 314

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNG--TKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728
           LYVADTENH LR ++     V TLAG G   +G D +GGE  T+  LNSPWD+  +    
Sbjct: 315 LYVADTENHLLRTVNLTTWEVSTLAGTGEQARGRD-RGGELRTTA-LNSPWDLYIQ--QG 370

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            +Y+AMAG HQ+W H+      + ++G G E   NGS +  ++ AQPSGI  + D   +Y
Sbjct: 371 VLYVAMAGPHQLWSHALGSKTIQNYAGSGREDITNGSLA-QSALAQPSGI--TSDGESLY 427

Query: 789 VADSESSSIRALNLKTGG---------SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           V DSE SSIR +               + ++   D     +LF+FGD DG GS V LQHP
Sbjct: 428 VVDSEGSSIRKITTSEADKLEDPEGKVTTVVGASDLPRGASLFEFGDIDGKGSAVRLQHP 487

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGII 898
           LG+     G+++VADSYNHKIK +DP      +  G GK     GAALA  QLSEPAG +
Sbjct: 488 LGI-VFHEGKLFVADSYNHKIKVIDPIKRTCESWLGNGKP----GAALAPVQLSEPAG-L 541

Query: 899 EAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTP 940
               G LFIADTNN+ +  +DL  +      L+++G+  P P
Sbjct: 542 ATYGGVLFIADTNNHRVLKVDLKTKAA--TELKIEGLTAPKP 581


>gi|434391812|ref|YP_007126759.1| NHL repeat containing protein [Gloeocapsa sp. PCC 7428]
 gi|428263653|gb|AFZ29599.1| NHL repeat containing protein [Gloeocapsa sp. PCC 7428]
          Length = 509

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/496 (44%), Positives = 310/496 (62%), Gaps = 22/496 (4%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    WLN   PL  ++ L+G+V++LDFWTYCCINC+H LPDL++LE+KYKD   TV
Sbjct: 7   PELPQNQAWLNVEQPLSLQQ-LRGQVIILDFWTYCCINCLHTLPDLKYLERKYKD-NLTV 64

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +G+HSAKFDNEK++E IR A+LRY I HPV+ D    +W++  V +WPT  ++ P G ++
Sbjct: 65  IGIHSAKFDNEKEVENIRQAILRYDIEHPVLVDSGFKVWQQYAVRAWPTLMIIDPEGYVV 124

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           + ++GEGH   +D LV   +  + +K       L L LEK   P    +PL FPGK+   
Sbjct: 125 SYVSGEGHCNAIDQLVAQLIQKHQEKGTFSAQVLNLILEKQRQP--LITPLAFPGKVLAT 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
             +  LFI+DS H+RIVV+ L G     IG +G+ GLRDGSF +A F  PQG+ ++ +K 
Sbjct: 183 TAS--LFIADSGHHRIVVSTLAGELQYVIG-TGKPGLRDGSFSEAQFFSPQGMCFDTEKQ 239

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNSPWDVCYKPINE 728
           LLYVADTENHA+R IDF    V T+AG G +  + Q     G    LNSPWD+  + +  
Sbjct: 240 LLYVADTENHAIRRIDFQRQVVETIAGTGDQSRNIQPHHGAGLETALNSPWDI--QQVGN 297

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            ++I MAG HQIWE          ++G G E  ++G+ +  ++FAQPSGI  + D  ++Y
Sbjct: 298 SLFIVMAGSHQIWELQLETLAISTYAGRGAEACIDGALA-ESAFAQPSGI--TTDGKDLY 354

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           +ADSE SSIR ++L+      L G        LF FGD DG+G+EV LQH LGV   +  
Sbjct: 355 IADSEVSSIRRISLENLQVTTLCGS-----GELFGFGDVDGVGAEVRLQHCLGVEYFQE- 408

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
           Q+++AD+YNHKIK++DP ++   T+ G   AG +D     AQ SEP+G +      +F+A
Sbjct: 409 QLWIADTYNHKIKRVDPHTSICQTVLG-DAAGDRDHKQTNAQFSEPSG-LSGIGSYIFVA 466

Query: 909 DTNNNIIRYLDLNKEE 924
           DTNN+ IR +++N  E
Sbjct: 467 DTNNHAIRRVNVNTLE 482



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IE 899
           G   A    +++ADS +H+I  +   +  +  + G GK G +DG+   AQ   P G+  +
Sbjct: 177 GKVLATTASLFIADSGHHRIV-VSTLAGELQYVIGTGKPGLRDGSFSEAQFFSPQGMCFD 235

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPE 926
            +   L++ADT N+ IR +D  ++  E
Sbjct: 236 TEKQLLYVADTENHAIRRIDFQRQVVE 262


>gi|347756512|ref|YP_004864075.1| Thiol-disulfide isomerase / thioredoxin [Candidatus
            Chloracidobacterium thermophilum B]
 gi|347589029|gb|AEP13558.1| Thiol-disulfide isomerase / thioredoxin [Candidatus
            Chloracidobacterium thermophilum B]
          Length = 676

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 254/641 (39%), Positives = 353/641 (55%), Gaps = 52/641 (8%)

Query: 431  PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
            PE    + W N   PL   + L+GKVV+LDFWTYCCINC+HV+PDL+ LE KY +    V
Sbjct: 51   PELEGGMAWFNVPGPLSLAQ-LRGKVVLLDFWTYCCINCLHVIPDLKALEAKYPNE-LVV 108

Query: 490  VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
            +GVHS KF  EK+  +I+ AV+RY I HPVVND +  +W    V +WPT  ++ P+G + 
Sbjct: 109  IGVHSGKFKTEKETNSIQQAVVRYDIRHPVVNDANFAIWNAYAVRAWPTLVLISPDGYVA 168

Query: 550  AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT---SPLKFPGKL 606
            ++ AGEGHR++LD  + A +    KK  L   P+ ++      PR F    SPL+FPGK+
Sbjct: 169  SRYAGEGHREELDRDIAALIAEARKKGTLKLDPVEIT------PRPFQETDSPLRFPGKV 222

Query: 607  AIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA 666
              D  + RLFI+D+NH+RIVV   DG  +  IG SG  G R+G ++ A F  PQG+A + 
Sbjct: 223  YADAASQRLFIADTNHHRIVVAGFDGKVLDTIG-SGAPGTRNGPYNFAEFQYPQGMALDG 281

Query: 667  KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
              + LYVADT NH LR ++     V T+AG G      Q G  GTS  L+SPWD+     
Sbjct: 282  --DFLYVADTGNHLLRRVNLKTRMVETVAGTGKNERSRQTG-PGTSVGLSSPWDLAIH-- 336

Query: 727  NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS-FAQPSGISLSPDFM 785
               ++IAMAG HQIW+++   GV   ++G G E   +G  +L T+ FAQPSG  LS D  
Sbjct: 337  QRTLFIAMAGAHQIWQYNLDTGVVGPYAGTGAEGRQDG--TLETAVFAQPSG--LSTDGK 392

Query: 786  EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
             +YVADSE S++RA++L TG    LAGGD      LF FGD +G G     QHPLGV  A
Sbjct: 393  RLYVADSEISAVRAIDLATGQVTTLAGGD------LFDFGDTNGKGENARFQHPLGVAAA 446

Query: 846  KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
            +  ++YVAD+YNHK++ +D  +  VS L G G  G ++   L A   EP G+  A  G L
Sbjct: 447  ER-KLYVADTYNHKLRTIDLRTRFVSNLIGSGMPGLQND--LPALFHEPGGLSYAA-GKL 502

Query: 906  FIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGG- 964
            F+ADTNN++IR ++   E   + T  +  +  PT     P +L+  + P+ + I V    
Sbjct: 503  FVADTNNHVIRLVEF--EPTRVSTFAIDKLTAPT-----PIKLKDDALPNEEQIGVPTQR 555

Query: 965  -LSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRM 1023
                 G I + I LP  + ++  A  ++ V +E     +  P         S+ L F   
Sbjct: 556  LTPGAGEIVVDIQLPPGFKYAPTAEQRYFVSIEAGTEGLTIPAKAMAV--TSSKLRFPVS 613

Query: 1024 SPSVSTGR------ISCKVYYCKE--DEVCLYKPLLFEVPF 1056
             P   T        +   V +CKE  +  C      F VPF
Sbjct: 614  IPYTVTANGMGAFDVVVSVTFCKEGNEGFCSVATYRFHVPF 654


>gi|434403812|ref|YP_007146697.1| thiol-disulfide isomerase-like thioredoxin [Cylindrospermum
           stagnale PCC 7417]
 gi|428258067|gb|AFZ24017.1| thiol-disulfide isomerase-like thioredoxin [Cylindrospermum
           stagnale PCC 7417]
          Length = 506

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/513 (43%), Positives = 327/513 (63%), Gaps = 28/513 (5%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    WLNT  PL  ++ LKG+VV+LDFWTYCCINC+H+LPDL++LE+KY++   TV
Sbjct: 8   PELPQNYPWLNTEKPLSLKQ-LKGRVVILDFWTYCCINCLHILPDLKYLEQKYQN-SLTV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFDNEK+ E IR A+LRY I HPV+ D +  +W+E  V +WPT  V+ P   ++
Sbjct: 66  IGVHSAKFDNEKETENIRQAILRYDIEHPVLVDINFRVWQEYAVRAWPTLMVIDPQTYVV 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
             ++GEGHR  LD L+E  +  + +K  ++   L L+LEK   P +  +PL FPGK+   
Sbjct: 126 NYVSGEGHRDSLDQLIENLIHEHREKGTINFQELSLTLEKQRQPLI--TPLAFPGKVLAT 183

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
                LFI+DS H+R+V++  +G     IG +G+ G  DG+F +A F+ PQG+AY+A+  
Sbjct: 184 PAG--LFIADSGHHRLVMSSFNGEVFHIIG-TGKSGFTDGNFSEAQFSAPQGMAYDAENQ 240

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSD---YQGGEKGTSQLLNSPWDVCYKPI 726
           +LYVADTENHALR++D     V T+AG G +  +   + G    T+  LNSPWD+  + I
Sbjct: 241 ILYVADTENHALRKVDIKRQVVGTIAGTGEQSHNTRPHSGAALETA--LNSPWDL--EKI 296

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
              ++IAMAG HQIW+    + + + ++G G E  ++G+ +  ++FAQPSGI  + D  E
Sbjct: 297 GNSLFIAMAGNHQIWQLDLENHIVKTYAGTGGEGCVDGNFT-ESAFAQPSGI--TTDGKE 353

Query: 787 IYVADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           +++ADSE SSIR + L + G  R + GG       LF FGD DG   +V LQH LGV   
Sbjct: 354 LFIADSEISSIRGVELGENGKVRTVCGG-----GFLFDFGDIDGQYFDVRLQHCLGVDFF 408

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
           +N  ++V D+YNHKIK ++P +    T+ G G AG ++G     +  EP+G + A +  L
Sbjct: 409 QN-HLWVTDTYNHKIKLVNPITGDCQTVLGDGSAGLQNGQGKNTRFFEPSG-LSAIDSYL 466

Query: 906 FIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           +I+DTNN++IR +DL  E  E+ TL+  G+  P
Sbjct: 467 YISDTNNHVIRRVDL--ETLEVTTLQFSGLCAP 497


>gi|405960880|gb|EKC26754.1| NHL repeat-containing protein 2 [Crassostrea gigas]
          Length = 699

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 267/705 (37%), Positives = 388/705 (55%), Gaps = 90/705 (12%)

Query: 398  FEQTEGGSSQSERIQQFVN-YISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKV 455
            F+Q    +  +E+    +  +I+ VEN+      P+F   L+W+N ++PL   + LKGKV
Sbjct: 14   FDQKLQDTDDTEKRHIVIREHINLVENKLKVK-CPQFKTDLEWMNVSSPLNLEQ-LKGKV 71

Query: 456  VVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYG 514
            VVLDF+TYCCINC+H+LPDL  LE ++       V+GVHSAKF+NEK    I +A+LRY 
Sbjct: 72   VVLDFFTYCCINCLHILPDLAALENQFTIQDGVVVIGVHSAKFENEKISANILSAILRYN 131

Query: 515  ISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGK 574
            I HPV+ND +  LW EL +  WPT  V+ P+G +L    GEGHRK L + V     FY  
Sbjct: 132  IDHPVMNDDEATLWNELMIQCWPTLVVLSPSGYILQFYVGEGHRKRLLEFVNVCTSFYRD 191

Query: 575  KKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNF 634
            K LL    +PL LEK          LKFPGK+ +   N  + +SD+ HNR++V   DG  
Sbjct: 192  KGLLSKHDIPLDLEKHKRDNF---SLKFPGKICVSGKN--IVVSDTGHNRVLVLSKDG-- 244

Query: 635  IVQIGSSGEE-GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRT 693
            +VQ    G+E G ++G+F    F+ PQG+    K+N++Y+ADTENHA+R+ID     V T
Sbjct: 245  VVQHCIGGKERGFKNGTFTQCRFDSPQGVV--MKENVIYLADTENHAIRKIDLQKQEVTT 302

Query: 694  LAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP-----INEKVYIAMAGQHQIWEHSTVD- 747
            +AGNG +G+D  GG  G  Q L+SPWD+   P      +  +YIAMAG HQIW +  +D 
Sbjct: 303  IAGNGKQGNDKFGGGIGIEQELSSPWDLVIGPSPDGQTDSVLYIAMAGTHQIWVYFLIDV 362

Query: 748  ----------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL--SPDFMEIYVADSESS 795
                      G    F+G G E N N +     +FAQPSG++L  +P+   ++VADSESS
Sbjct: 363  KWYKGKEYKQGSCVRFAGSGNEENRNNNYPEKAAFAQPSGLTLGNTPEGSFLFVADSESS 422

Query: 796  SIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVAD 854
            ++R++ LK G  + + GG+   P NLF +GD+DG G +  LQHPLGV + A +G I VAD
Sbjct: 423  TVRSVALKDGAVKHVVGGERD-PMNLFAYGDKDGTGIDAKLQHPLGVAWVADSGSILVAD 481

Query: 855  SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNN 913
            SYNHK+K +D +  + +T+ G       DG      L+EP G+ ++++ G  +IADTNN+
Sbjct: 482  SYNHKLKLVDISKKQCTTVWG------SDG---EVTLNEPGGLSVDSKQGLSYIADTNNH 532

Query: 914  IIRYLDLN------------KEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVV 961
             IR L +              +  +  T++L  +  P    + P++         +TI V
Sbjct: 533  SIRILRIQDKVMSQLPVIFPSDTVDSLTIKLSDILKP---GKEPEK--------NETISV 581

Query: 962  DGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFR 1021
              G  +E  + L +SLP   H + EA SK++  ++  +       DG  +P  S     +
Sbjct: 582  APG--SEVKVNLLLSLPVGGHVNDEAPSKWTAVMQESSC------DGAGNPIFSQTGTIQ 633

Query: 1022 RMSPS----------VSTGR----ISCKVYYCKEDEVCLYKPLLF 1052
              SP            S+GR    +  KV+YC E + C  K  +F
Sbjct: 634  ETSPQHLFSWKMPDLSSSGRLFLYLKAKVFYCDESKACKMKEKVF 678


>gi|355707227|gb|AES02894.1| NHL repeat containing 2 [Mustela putorius furo]
          Length = 498

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/493 (45%), Positives = 310/493 (62%), Gaps = 30/493 (6%)

Query: 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNA 509
           L GKVV+LDF+TYCCINC+H+LPDL  LE  Y D     +VGVHSAKF NEK ++ I++A
Sbjct: 1   LCGKVVILDFFTYCCINCIHLLPDLHALEHTYSDKDGLLIVGVHSAKFPNEKVVDNIKSA 60

Query: 510 VLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           VLRY I+HPVVND D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL
Sbjct: 61  VLRYNITHPVVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSMAL 120

Query: 570 LFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTD 629
            +Y  +  + +  + + L KD+ P    SPL FPGK+ +D +++RL I+D+ H+RI+V  
Sbjct: 121 KYYKDRGQIRDNKIEVKLYKDSLP---PSPLLFPGKVTVDHVSHRLVIADTGHHRILVVR 177

Query: 630 LDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND 689
            +G     IG     G +DG F ++TFN PQG+A   + N++YVADTENH +R+ID   +
Sbjct: 178 KNGEIQYSIGGP-NPGRKDGIFSESTFNSPQGVA--IRNNIIYVADTENHLIRKIDLEAE 234

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIW-- 741
            V T+AG G +G+D +GG +G  Q ++SPWDV +         N+ ++IAMAG HQIW  
Sbjct: 235 MVSTVAGIGIQGTDKEGGAQGEEQPISSPWDVVFGTSGSEVQRNDILWIAMAGTHQIWAL 294

Query: 742 ---------EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVA 790
                    ++    G    F+G G E N N +      FAQPSG+SL+P+  +  ++VA
Sbjct: 295 LLDCGRLPKKNELKKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLAPEDPWSCLFVA 354

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQ 849
           DSESS++R ++LK G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   
Sbjct: 355 DSESSTVRTVSLKDGAVKHLVGGER-DPMNLFAFGDVDGVGVNAKLQHPLGVTWDKKRNL 413

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFI 907
           +YVADSYNHKIK +DP +   STLAG G A     ++   +  +EP G+   +N   L++
Sbjct: 414 LYVADSYNHKIKVVDPKTKNCSTLAGTGDASNVTTSSFTESTFNEPGGLCIGENDQLLYV 473

Query: 908 ADTNNNIIRYLDL 920
           ADTNN+ I+ +DL
Sbjct: 474 ADTNNHQIKVMDL 486



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 16/177 (9%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKK--NLLYVADTENHALREIDFVNDTVRTLAG 696
           GS  EE   +     A F +P GL+   +   + L+VAD+E+  +R +   +  V+ L G
Sbjct: 317 GSGNEENRNNAYPHKAGFAQPSGLSLAPEDPWSCLFVADSESSTVRTVSLKDGAVKHLVG 376

Query: 697 ------NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
                 N     D  G   G +  L  P  V +      +Y+A +  H+I     VD  T
Sbjct: 377 GERDPMNLFAFGDVDG--VGVNAKLQHPLGVTWDKKRNLLYVADSYNHKI---KVVDPKT 431

Query: 751 R---AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
           +     +G G   N+  SS   ++F +P G+ +  +   +YVAD+ +  I+ ++L+T
Sbjct: 432 KNCSTLAGTGDASNVTTSSFTESTFNEPGGLCIGENDQLLYVADTNNHQIKVMDLET 488



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D D     + L+ P  +  D   N L+++DS +++I V D        +  +
Sbjct: 381 PMNLFAFGDVDGVGVNAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCSTLAGT 440

Query: 642 GE-EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691
           G+   +   SF ++TFN P GL       LLYVADT NH ++ +D    T+
Sbjct: 441 GDASNVTTSSFTESTFNEPGGLCIGENDQLLYVADTNNHQIKVMDLETKTI 491


>gi|75909875|ref|YP_324171.1| NHL repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75703600|gb|ABA23276.1| NHL repeat protein [Anabaena variabilis ATCC 29413]
          Length = 503

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/511 (43%), Positives = 315/511 (61%), Gaps = 26/511 (5%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    WLNT  PL  ++ L+G+VV+LDFWTYCCINC+HVLPDL++LE+KYKD   TV
Sbjct: 8   PELPQNYPWLNTEQPLSIKQ-LRGRVVILDFWTYCCINCLHVLPDLKYLEQKYKD-SLTV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFDNE++ E IR A+LRY I HPV+ D    +W+E  V +WPT  V+ P G ++
Sbjct: 66  IGVHSAKFDNEQETENIRQAILRYDIEHPVLVDKGFRVWQEYAVRAWPTLMVIDPKGYVI 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
             ++GEG+R  LD L+   +  +  +  ++   L L+LEK   P    +PL FPGK+   
Sbjct: 126 GYVSGEGNRDKLDQLITQVIQEH--QGAINFQQLSLTLEKQRQP--LITPLAFPGKVLAT 181

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
                LF++DS H+RIVV+D +G  +  IG +G+ GL DG+F +A F+ PQG+A++ +  
Sbjct: 182 --PGGLFVADSGHHRIVVSDFNGEILHLIG-NGKSGLTDGNFQEAQFSAPQGMAFDMENQ 238

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWDVCYKPINE 728
           +LYVADT+NH +R  D    TV T+AG G +  + Q  G  G    LNSPWD+    +  
Sbjct: 239 ILYVADTDNHVVRRADIQQQTVETIAGTGEQSRNIQPHGGAGLETALNSPWDLV--KVGN 296

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            +YIAMAG HQIW+     G  + ++G G E   +G  +  + FAQPSGI+ +    E+Y
Sbjct: 297 SLYIAMAGTHQIWQMDLPSGFVKTYAGTGAEGCFDGYLT-ESVFAQPSGITNNE--QELY 353

Query: 789 VADSESSSIRALN-LKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +ADSE SSIR +  L+    R + G        LF FGD DG G  V LQH LGV   +N
Sbjct: 354 IADSEISSIRGVGLLEPQEVRTVCGS-----GGLFGFGDVDGQGENVRLQHCLGVEYFQN 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             ++VAD+YNHKIK + P +    T+ G G AG ++G     +  EP+G + A +  L+I
Sbjct: 409 -YLWVADTYNHKIKLVSPHTGNCQTVLGDGSAGLQNGQGKNTRFFEPSG-LSAMDSYLYI 466

Query: 908 ADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           +DTNN++IR +DL     E+ T++  G+  P
Sbjct: 467 SDTNNHVIRRVDLRT--LEVTTMQFNGLCAP 495



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 4/99 (4%)

Query: 606 LAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           L ++   N L+++D+ NH   +V+   GN    +G  G  GL++G   +  F  P GL+ 
Sbjct: 401 LGVEYFQNYLWVADTYNHKIKLVSPHTGNCQTVLGD-GSAGLQNGQGKNTRFFEPSGLS- 458

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            A  + LY++DT NH +R +D     V T+  NG    D
Sbjct: 459 -AMDSYLYISDTNNHVIRRVDLRTLEVTTMQFNGLCAPD 496


>gi|340370782|ref|XP_003383925.1| PREDICTED: NHL repeat-containing protein 2-like [Amphimedon
           queenslandica]
          Length = 730

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/557 (41%), Positives = 333/557 (59%), Gaps = 27/557 (4%)

Query: 403 GGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA--PLQFRR-DLKGKVVVLD 459
           G  SQS +    ++++  +E      I PEFP+  +W NT   PL F    L+G +++LD
Sbjct: 24  GDGSQSVKEDAILSHLKALETDSRFNIDPEFPSDGNWFNTGGKPLSFSSGQLEGNLILLD 83

Query: 460 FWTYCCINCMHVLPDLEFLEKKY-KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHP 518
           F+TYCCINC+H+LPDL  LE K+  +    VVGVHS KF NEK    + NA+LRY I HP
Sbjct: 84  FFTYCCINCLHLLPDLAKLESKFSHNEGLLVVGVHSPKFPNEKGDSNLLNAILRYDIHHP 143

Query: 519 VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLL 578
           V+ND ++ LW +LG++ WPT  ++GP  KL+  + GEGH  +++  V  AL +Y    +L
Sbjct: 144 VLNDVNIILWEKLGISCWPTVVLIGPGNKLIYYIIGEGHYMEMELFVSTALRYYKSSGVL 203

Query: 579 DNTPLPLSLEKDNDPRLFTSPLKFPGKLAI---DILNNRLFISDSNHNRIVVTDLDGNFI 635
               + ++LEKD   ++  S L FPGKL       ++  L ISDS+++R++V D     +
Sbjct: 204 RGVSVGVALEKD---KVEESILSFPGKLVSFKRGGVSELLCISDSSNHRVLVVDAVTGLV 260

Query: 636 VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA 695
            Q+  SG  G +DG   +A FN PQGL     +  +YVADTENH +R+I   +D V T+A
Sbjct: 261 KQVYGSGSPGFKDGRGKEAEFNCPQGLVIC--EECVYVADTENHLIRKISLSDDFVLTVA 318

Query: 696 GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD-------- 747
           G G +G+D +GG+ G  Q ++SPWD+        +YIAMAG HQ+W +   +        
Sbjct: 319 GTGYQGNDKEGGKVGKEQEISSPWDLAINSDCSIIYIAMAGTHQLWAYFLNNAQLFKKVE 378

Query: 748 ---GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
              G      G G E N N S     + AQPSG+SL+ D   +YVADSESS+IR+++L  
Sbjct: 379 YGRGSVVRMVGSGEEANKNNSFPYKAALAQPSGLSLTKDGSILYVADSESSTIRSVSLNE 438

Query: 805 GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKL 863
           GG      G  + P +LF +GD DG G +V LQHP+GV +   N  +Y+ADS+NHKIK +
Sbjct: 439 GGGVKAVVGGALDPMDLFAYGDVDGKGRDVKLQHPMGVAWDDTNQLLYIADSFNHKIKVV 498

Query: 864 DPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNK 922
           +P +   STLAG G  G  DG+   AQ SEPAG+  +Q G+ L++ADTNN+ IR LDL  
Sbjct: 499 NPKTKVCSTLAGTGSPGLVDGSFEVAQFSEPAGLCMSQEGDTLYVADTNNHAIRILDL-- 556

Query: 923 EEPELQTLELKGVQPPT 939
           +E ++  ++L+  Q  T
Sbjct: 557 KEKKVSQVKLRLSQDST 573


>gi|443708985|gb|ELU03866.1| hypothetical protein CAPTEDRAFT_52631, partial [Capitella teleta]
          Length = 507

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/504 (47%), Positives = 303/504 (60%), Gaps = 37/504 (7%)

Query: 437 LDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY-KDMPFTVVGVHS 494
           L+W N+A PL    +L G++V+LDF+TYCCINCMH+LPDLE +E+ + ++    VVGVHS
Sbjct: 2   LEWFNSAEPLSLSGNLSGRLVLLDFFTYCCINCMHILPDLEAVEQAFPQEKGLQVVGVHS 61

Query: 495 AKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAG 554
           AKFDNEK    IR A+LRYGI HPVVND D  LW E+ V  WPT  ++GP+ K+L  LAG
Sbjct: 62  AKFDNEKVSANIRAALLRYGIHHPVVNDCDAILWHEMLVQCWPTVVLIGPDQKVLLSLAG 121

Query: 555 EGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR 614
           EGHR  L D +E AL  Y     ++  P+         P        FP K+ ID    R
Sbjct: 122 EGHRDVLLDCIEVALEHYSNT--INRQPI------QPGPSANIGEHLFPSKICIDAKGER 173

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           L +SD+  +RIVV  ++G     IG  G  GL DGSF  + F  PQG+ ++   +L+ VA
Sbjct: 174 LVMSDAVRHRIVVASMNGMVQHVIGGRG-HGLTDGSFISSQFFGPQGVCFHG-DDLIIVA 231

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           DTENHA+R+ID V  TVRT+AGNG +G+D  GG+    Q ++SPWDV        VYIAM
Sbjct: 232 DTENHAIRKIDLVAGTVRTIAGNGKQGTDLAGGKLFCLQEISSPWDVVMGS-EGVVYIAM 290

Query: 735 AGQHQIW----EHSTV-------DGVTRAFSGDGYERNLNGSSSLNTSFAQPSG-----I 778
           AG HQIW    +   V        G     +G G E N N    L  +FAQPSG     I
Sbjct: 291 AGTHQIWALCLDQDAVILGTPFQKGTCVRIAGSGEEENRNTRYPLTAAFAQPSGLAIHKI 350

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
            LSP    +Y+ADSESSSIR+L+L  G  + + G D I P NLF FGD DG G E  LQH
Sbjct: 351 KLSP---ILYIADSESSSIRSLDLSDGSVKSVVGAD-IDPKNLFAFGDVDGKGIEAKLQH 406

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG--FKDGAALAAQLSEPAG 896
           PL V  A++GQ++VADSYNHKIKK+ P    V T+ G GK G   KD + L   L+EP G
Sbjct: 407 PLAVTLAEDGQLFVADSYNHKIKKVVPKFREVRTVFGTGKMGDTLKD-SPLQCALNEPGG 465

Query: 897 I-IEAQNGNLFIADTNNNIIRYLD 919
           +     +  L+IADTNN+ I+  D
Sbjct: 466 LAYNPHSRRLYIADTNNHYIKIYD 489



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)

Query: 636 VQIGSSGEEGLRDGSFD-DATFNRPQGLAYNAKK--NLLYVADTENHALREIDFVNDTVR 692
           V+I  SGEE  R+  +   A F +P GLA +  K   +LY+AD+E+ ++R +D  + +V+
Sbjct: 318 VRIAGSGEEENRNTRYPLTAAFAQPSGLAIHKIKLSPILYIADSESSSIRSLDLSDGSVK 377

Query: 693 TLAG------NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
           ++ G      N     D  G  KG    L  P  V     + ++++A +  H+I +    
Sbjct: 378 SVVGADIDPKNLFAFGDVDG--KGIEAKLQHPLAVTLAE-DGQLFVADSYNHKIKKVVPK 434

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
               R   G G   +    S L  +  +P G++ +P    +Y+AD+ +  I+  + +   
Sbjct: 435 FREVRTVFGTGKMGDTLKDSPLQCALNEPGGLAYNPHSRRLYIADTNNHYIKIYDTEANM 494

Query: 807 SRLLA 811
           S +++
Sbjct: 495 SGIVS 499



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 29/222 (13%)

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           P  +C     E++ ++ A +H+I   S    V     G G+   L   S +++ F  P G
Sbjct: 162 PSKICIDAKGERLVMSDAVRHRIVVASMNGMVQHVIGGRGH--GLTDGSFISSQFFGPQG 219

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           +    D + I VAD+E+ +IR ++L  G  R +AG          K G     G    LQ
Sbjct: 220 VCFHGDDL-IIVADTENHAIRKIDLVAGTVRTIAGNG--------KQGTDLAGGKLFCLQ 270

Query: 838 H---PLGVYCAKNGQIYVADSYNHKIKKLDPASNRV--------STLAGIGKAGFKDGA- 885
               P  V     G +Y+A +  H+I  L    + V         T   I  +G ++   
Sbjct: 271 EISSPWDVVMGSEGVVYIAMAGTHQIWALCLDQDAVILGTPFQKGTCVRIAGSGEEENRN 330

Query: 886 ---ALAAQLSEPAGIIEAQ---NGNLFIADTNNNIIRYLDLN 921
               L A  ++P+G+   +   +  L+IAD+ ++ IR LDL+
Sbjct: 331 TRYPLTAAFAQPSGLAIHKIKLSPILYIADSESSSIRSLDLS 372


>gi|427706390|ref|YP_007048767.1| alkyl hydroperoxide reductase [Nostoc sp. PCC 7107]
 gi|427358895|gb|AFY41617.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Nostoc sp. PCC 7107]
          Length = 505

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/513 (42%), Positives = 322/513 (62%), Gaps = 28/513 (5%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    WLNT  PL  ++ L+G+VV+LDFWTYCC+NC+H+LPDL++LE KYKD   TV
Sbjct: 8   PELPQNYAWLNTDKPLSLKQ-LRGRVVILDFWTYCCVNCLHILPDLKYLEHKYKD-SVTV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFDNE++ E IR A+LRY I HPV+ D +  +W+E  V +WPTF ++ P G ++
Sbjct: 66  IGVHSAKFDNEQETENIRQAILRYDIEHPVIVDQNFRVWQEYTVRAWPTFMIIDPEGYVI 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
             ++GEG R  LD L+   +  + +K  ++   +   LEK   P +  SPL F GK+   
Sbjct: 126 GYVSGEGRRDVLDKLIAKVIAEHQQKSTINFQQINHILEKQQQPTI--SPLAFTGKVLAT 183

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
            +   LFI+DS H+R+V+++ DG  +  IG +G+ GL DGSF  A F+ PQG+ ++++  
Sbjct: 184 PVG--LFIADSGHHRLVMSNFDGEVLHIIG-TGKSGLTDGSFSTAQFSAPQGMVFDSENQ 240

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSD---YQGGEKGTSQLLNSPWDVCYKPI 726
           + Y+ADTENHALR +D     V T+AG G +  +   + G    T+  LNSPWD+    +
Sbjct: 241 IFYIADTENHALRRVDLKQQIVETIAGTGEQSRNIHPHSGVALETA--LNSPWDLV--KV 296

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
              ++IAMAG HQIW+ +    + + ++G G E  ++GS +  ++FAQPSGI  + D  +
Sbjct: 297 GNILFIAMAGSHQIWQMNLDTNIIKTYAGTGAEGCVDGSLT-ESAFAQPSGI--TTDGQQ 353

Query: 787 IYVADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           +Y+ADSE S+IR++ + +    R + G        LF FGD DG  ++V LQH +GV  A
Sbjct: 354 LYIADSEISTIRSVEIVEPFQVRTVCGS-----QQLFGFGDVDGRATDVRLQHCMGVEYA 408

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
            N  ++VAD+YNHKIK + P++    T+ G G AG +DG    ++  EP+G + A N  L
Sbjct: 409 DNF-LWVADTYNHKIKLVSPSTGNCQTILGDGFAGLQDGQGKNSRFFEPSG-LSAINSYL 466

Query: 906 FIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           +I+DTNN+ IR +DLN    E+ TL   G+  P
Sbjct: 467 YISDTNNHAIRRVDLNTF--EVTTLNFVGLCAP 497


>gi|427731644|ref|YP_007077881.1| thiol-disulfide isomerase-like thioredoxin [Nostoc sp. PCC 7524]
 gi|427367563|gb|AFY50284.1| thiol-disulfide isomerase-like thioredoxin [Nostoc sp. PCC 7524]
          Length = 505

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 220/511 (43%), Positives = 314/511 (61%), Gaps = 24/511 (4%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    WLNT  PL  R+ L+G+VV+LDFWTYCCINC+HV P L++LE KY+D   TV
Sbjct: 8   PELPQHYAWLNTDYPLSLRQ-LRGRVVILDFWTYCCINCIHVFPHLKYLEHKYQD-SLTV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFDNE++ E IR A+LRY I HPV+ D    +W+E  V +WPT  ++ P   ++
Sbjct: 66  IGVHSAKFDNEQETENIRQAILRYDIEHPVLVDRGFRVWQEYAVRAWPTLMIIDPESYVI 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
             +AGE +R  LD L+   +  + +K  ++     L+LEK   P    +PL FPGK+   
Sbjct: 126 GYIAGEANRDVLDQLIAELIQKHQEKGTINFQQFSLTLEKQRQP--LITPLAFPGKVLAT 183

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
            +   LFI+DS HNR+V+++L G  +  IG +G+ G  DG+FD+A F+ PQG+ ++A   
Sbjct: 184 PVG--LFIADSGHNRLVLSNLKGEVLHLIG-TGKSGFTDGAFDEAQFSAPQGMTFDAANQ 240

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSD-YQGGEKGTSQLLNSPWDVCYKPINE 728
           +LYVADT+NHA+R+I+     V T+AG G +  + +  G  G    LNSPWD+    +  
Sbjct: 241 ILYVADTDNHAVRQINLKRQIVETIAGTGEQSRNIHPHGGVGLETALNSPWDLV--KVGN 298

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            ++IAMAG HQIW      G+   ++G G E   +G  +  ++FAQPSGI+ +    E++
Sbjct: 299 TLFIAMAGSHQIWRIDLDTGMISTYAGTGAEGCFDGLLT-ESAFAQPSGITTNG--QELF 355

Query: 789 VADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +ADSE SSIR + L +    R + G       +LF FGD DG    V LQH LG+  A N
Sbjct: 356 IADSEISSIRGVGLIELSQVRTICGS-----GDLFGFGDVDGQDENVRLQHCLGIEHANN 410

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             ++VAD+YNHKIK + P +    T+ G G AG +DG   +A+  EP+G + A + NL+I
Sbjct: 411 F-LWVADTYNHKIKLVSPNTGNCQTILGDGNAGLQDGQGKSARFFEPSG-LSAMDSNLYI 468

Query: 908 ADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
            DTNN+ IR +DLN    E+ TL+  G+  P
Sbjct: 469 CDTNNHAIRRVDLNT--LEVTTLQFPGLCAP 497


>gi|170066897|ref|XP_001868267.1| NHL repeat containing 2 [Culex quinquefasciatus]
 gi|167863075|gb|EDS26458.1| NHL repeat containing 2 [Culex quinquefasciatus]
          Length = 734

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 243/530 (45%), Positives = 317/530 (59%), Gaps = 51/530 (9%)

Query: 430 VPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPF 487
           V +F   LDW N T PL F   LKGK+VVLDF+TYCCINCMH+LPDL+ LE  Y  +   
Sbjct: 53  VRDFKEDLDWFNVTEPLSFEGALKGKIVVLDFFTYCCINCMHILPDLKRLEHLYSVEDGL 112

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            VVGVHSAKF+NEKD   I  AV RY ISHPVVND   ++WR L V  WPT  ++GP   
Sbjct: 113 VVVGVHSAKFENEKDSANIAAAVQRYEISHPVVNDNVASMWRALRVQCWPTLMILGPRAN 172

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
            L  + GEGH  DL   V  A+ FY  K  + N  LP++L      ++ TS L+FPGK+A
Sbjct: 173 PLFVIMGEGHFDDLKLYVSTAMKFYKDKGAILNHSLPMNLASS---QVETSHLQFPGKIA 229

Query: 608 I-------DILNNRLF-ISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
                   D  +N L+ ISDS ++RI+V + +G  + +IG   + G  DG F  A FN P
Sbjct: 230 CSYREGISDGNDNPLYAISDSGNHRILVVNSEGTVLHRIGGK-KSGFVDGDFRKARFNAP 288

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           QGLA+    ++++VAD ENHA+R ID  +  V T+AG+G +G D  GG+ G  Q+++SPW
Sbjct: 289 QGLAFQ-NDDVIFVADNENHAIRRIDLKSKQVTTVAGSGQQGCDRIGGKIGRDQIISSPW 347

Query: 720 DVC-YK---------------PINEKVYIAMAGQHQIW---EHSTV--------DGVTRA 752
           DV  Y+               P+ + ++IAMAG HQIW   E  T+         G   A
Sbjct: 348 DVAVYRTRNLDMSFHSDESKVPLRDVIFIAMAGIHQIWAIFEEETIWWKFKKYPAGSCLA 407

Query: 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG 812
            +G+G E N N S   N +FAQPSG++L+ D  E+Y+ADSESSSIR ++L  G    +AG
Sbjct: 408 VAGNGREENRNNSYPNNAAFAQPSGLALNRDAKELYLADSESSSIRKMSLADGKVLAVAG 467

Query: 813 GDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVS 871
           GD   P +LF FGD DG      LQHPLGV Y A++  IYVAD+YNHKIKK++ ++N  +
Sbjct: 468 GDR-NPLDLFSFGDIDGKLYAAKLQHPLGVAYNARDNCIYVADTYNHKIKKINASTNVAT 526

Query: 872 TLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
           T        F D A    Q SEPAG+    +G  L+IADTNN+ I   DL
Sbjct: 527 TCT------FTDEAGSIKQFSEPAGLCLDPSGRYLYIADTNNHQIAVADL 570


>gi|312372811|gb|EFR20689.1| hypothetical protein AND_19679 [Anopheles darlingi]
          Length = 745

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 246/589 (41%), Positives = 331/589 (56%), Gaps = 56/589 (9%)

Query: 404 GSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWT 462
           GS+  +R +  ++Y+    +R+   +  EFP  LDW N T PL  +  L+GKVVVLDF+T
Sbjct: 29  GSNAGKRQKLVMDYLK-ATDREGRSVSAEFPDGLDWFNVTEPLTLQGSLRGKVVVLDFFT 87

Query: 463 YCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVN 521
           YCCINCMH+LP+L+ LE  Y  +    V+GVHSAKF NEKD   IR AV RY I+HPVVN
Sbjct: 88  YCCINCMHILPNLKRLEHLYPIEQGLAVIGVHSAKFRNEKDSNNIRAAVERYEITHPVVN 147

Query: 522 DGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNT 581
           D  M +WR+L V  WPT  ++GP    L  + GEG+  DL   V +A+ +Y +K  L   
Sbjct: 148 DNVMAMWRKLRVQCWPTLMILGPRANPLFVILGEGNYDDLKLYVGSAIRYYREKGELRTH 207

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGK-LAIDILNNRLF-ISDSNHNRIVVTDLDGNFIVQIG 639
            LP+ L          S LKFPGK +  +     L+ +SDS ++RI++ +  G     IG
Sbjct: 208 SLPIDLSHTAG---LASHLKFPGKVVCCEGGEEELYAVSDSGNHRILIFEPSGTVRYTIG 264

Query: 640 SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
                G  DG F +A FN PQG+A+      LYVAD ENHA+R ID    TV T+AGNG 
Sbjct: 265 GK-SSGFVDGGFREARFNAPQGVAFRGGDE-LYVADNENHAIRRIDLRTRTVSTVAGNGV 322

Query: 700 KGSDYQGGEKGTSQLLNSPWDVCY----------------KPINEKVYIAMAGQHQIWEH 743
           +G+D  GG+ G  Q L+SPWDV                   P+ + + IA+AG HQIW  
Sbjct: 323 QGNDRTGGKTGREQALSSPWDVAVYTTRDLDMSFHVDESKAPLKDVLLIAIAGIHQIWAI 382

Query: 744 STVD-----------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS 792
              D           G   A +G G+E+N N S   + +FAQPSG++++ +  E+Y+ADS
Sbjct: 383 FLEDTIWWKFKKYTAGSCCAIAGSGHEQNRNTSYPHSAAFAQPSGLAINREVKEVYLADS 442

Query: 793 ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIY 851
           ESS+IR ++L  G    +AGGD   P +LF FGD DG G E   QHPLGV Y AK+G IY
Sbjct: 443 ESSAIRKISLTDGKVMAVAGGDR-NPLDLFAFGDVDGKGYEAKFQHPLGVAYNAKDGHIY 501

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADT 910
           VAD+YNHKIKK+D ++N  +T        F++      + SEPAG+   + G  LFIADT
Sbjct: 502 VADTYNHKIKKIDASTNCATTCE------FREANGEIKRFSEPAGLCLDRTGQLLFIADT 555

Query: 911 NNN----------IIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLR 949
           NN+           IR L L+   PE         +    +S+ P +LR
Sbjct: 556 NNHELLVASLPDGTIRPLKLHFPVPEEMDSSSADDRATVLRSKHPIKLR 604


>gi|427739164|ref|YP_007058708.1| thiol-disulfide isomerase-like thioredoxin [Rivularia sp. PCC 7116]
 gi|427374205|gb|AFY58161.1| thiol-disulfide isomerase-like thioredoxin [Rivularia sp. PCC 7116]
          Length = 487

 Score =  401 bits (1031), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/509 (44%), Positives = 318/509 (62%), Gaps = 46/509 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE P    WLNT      + L+G+VV+LDFWTYCCINC+HVLPDL++LE+KYKD   TV+
Sbjct: 19  PELPQNYSWLNTDKPFSLKQLRGRVVILDFWTYCCINCLHVLPDLKYLEQKYKD-SVTVI 77

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+HSAKFD+EK+ E IR A+LRY I HPV+ D D  +W+E  V ++PTF V+ P G ++A
Sbjct: 78  GIHSAKFDHEKETENIRQAILRYDIQHPVLVDRDFRVWQEYAVKAYPTFVVINPQGYIVA 137

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGK-LAID 609
            L GEG R+ LD+ +   +  + +K  +D     L LEKD  P +  +PL FPGK LA D
Sbjct: 138 TLTGEGKREILDEAIAKLIQLHQEKGTIDFQEFDLVLEKDKTPLI--TPLSFPGKVLATD 195

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
              ++LFI+DS H+RIVV+ L+G  +  IG SG+ GL+DGSF++  F  PQG+A++   N
Sbjct: 196 ---SKLFIADSGHHRIVVSSLNGEVLHLIG-SGKAGLKDGSFEETEFFAPQGMAFDEVDN 251

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           +LYVADTEN+A+R++DF +  V T+A              G  + LNSPWD+    +  K
Sbjct: 252 ILYVADTENNAIRKVDFKSQKVETIA--------------GIKESLNSPWDLV--KLGNK 295

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           ++IAMAG HQIWE        + ++G G E   + S S  ++FAQPSGI+ +    E+Y+
Sbjct: 296 LFIAMAGCHQIWELDLETNFVKVYAGRGAESCFDSSLS-ESAFAQPSGITTNGK--ELYI 352

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           ADSE SSIRA+NL+T   + + G       +L  FGD DG G +  LQH LG+    N  
Sbjct: 353 ADSEVSSIRAINLQTQQVKTICGS-----GDLNAFGDVDGQGFDARLQHCLGIEYTDNF- 406

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           ++VAD+YNHKIK ++P +    +L       F          SEP+G+   +N NL++AD
Sbjct: 407 LWVADTYNHKIKFVNPVTGDCRSLLENENNCF----------SEPSGLSIFEN-NLYVAD 455

Query: 910 TNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           TNN++I+ + L+     ++T+E KG+  P
Sbjct: 456 TNNHVIKKVSLDI--LVVETIEFKGLCSP 482


>gi|408405002|ref|YP_006862985.1| NHL repeat-containing protein [Candidatus Nitrososphaera gargensis
           Ga9.2]
 gi|408365598|gb|AFU59328.1| NHL repeat-containing protein [Candidatus Nitrososphaera gargensis
           Ga9.2]
          Length = 501

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/507 (43%), Positives = 307/507 (60%), Gaps = 25/507 (4%)

Query: 432 EFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           +F     WLNT  PL    DLKG VVVLDFWTYCCINCMH LPDLE++EKKY+  P  V+
Sbjct: 14  DFQKGFVWLNTDRPLSLD-DLKGHVVVLDFWTYCCINCMHTLPDLEWIEKKYRGRPVVVI 72

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHSAKF NE++ E IR A+ RY ISHPV+ D  M +W+  GV+ WPT  V+ P G ++ 
Sbjct: 73  GVHSAKFYNEQEAENIREAIGRYEISHPVIVDRGMEIWQSYGVSGWPTLVVIDPKGNVVY 132

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
           Q +GEG R+ LDD++   L  + ++  L   P+ +   +    R+    L +PGKL++  
Sbjct: 133 QQSGEGQREYLDDVISVLLKRHKEQGTLAPEPIEIKRPEAAHSRV----LSYPGKLSLSP 188

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
               L ISDSNHNRI+V D D   I+     G + LRDGSF+ A F RPQG+ +    + 
Sbjct: 189 DGRMLAISDSNHNRILVVDADSGKIIHKVGGGSKDLRDGSFEQARFFRPQGVLW-VGYDK 247

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +YVADTENHALREID  +  V+TLAGNG +G   Q  + G    L+SPWD+ +   +  +
Sbjct: 248 IYVADTENHALREIDLQSRMVKTLAGNGKQGYWIQSPQDGKVTQLSSPWDLTHD--SGFI 305

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
            IAMAG HQIW +    G    F+G GYE  ++GS    + FAQPSG+++  +++  +VA
Sbjct: 306 LIAMAGLHQIWAYHIQTGRIGPFAGSGYENIVDGSLE-ESQFAQPSGLAVFGNYL--FVA 362

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI 850
           DSE S++R ++L     +   G      + LF FG +DG   E  LQHPLGV C  + +I
Sbjct: 363 DSEVSAVRRIDLGRKVVQTAVG------EGLFVFGHKDGPLEEARLQHPLGVACESSNKI 416

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGK----AGFKDGAALAAQLSEPAGIIEAQNGNLF 906
           YVAD+YNH ++ +D A  R+STL G  +        D +     L EP+  +E +   L+
Sbjct: 417 YVADTYNHAVRLIDLAEQRISTLVGRPEMKTMCNIDDPSCDTLGLYEPSD-VEVRGSLLY 475

Query: 907 IADTNNNIIRYLDLNKEEPELQTLELK 933
           I DTNN+++R  DL K+   L+TL +K
Sbjct: 476 ITDTNNHLVRIFDLEKK--VLRTLAVK 500


>gi|241584846|ref|XP_002403871.1| NHL repeat-containing protein [Ixodes scapularis]
 gi|215500274|gb|EEC09768.1| NHL repeat-containing protein [Ixodes scapularis]
          Length = 621

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/550 (41%), Positives = 320/550 (58%), Gaps = 29/550 (5%)

Query: 397 SFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVV 456
           SFE+    +   +R      YI+ V++     ++ +F + +DW+NT+      DL+G+VV
Sbjct: 40  SFEREYKDAETEDRNSLIHRYIASVDDSDDRFLLGDFGSDMDWINTSRPLTASDLRGRVV 99

Query: 457 VLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGI 515
           VLDF+T+CCINC HVLP+++ LE++        VVG+HSAKF +EK   ++  AV R GI
Sbjct: 100 VLDFFTFCCINCQHVLPEIKRLEEELPPSSGLLVVGIHSAKFQHEKRPSSVGQAVQRLGI 159

Query: 516 SHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKK 575
           +HPVVND    LWR+L VN WPT  V+GP+ + L  L GEG    L     AA+  +G  
Sbjct: 160 NHPVVNDSSSRLWRKLWVNCWPTMVVLGPSSQALLVLVGEGSTSFLHLFCRAAVDHFGPD 219

Query: 576 KLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFI 635
             L   PL      D      + PL FP K  +     RL ++D+ H+R++V D DG  +
Sbjct: 220 LRLSALPL------DPGGTPLSKPLHFPAK--VFATETRLVVADTGHHRVLVADHDGRVL 271

Query: 636 VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA 695
             +GS  E G RDG+ +DA FN PQG+ +    + +YVADT NH +RE+D     VRT+A
Sbjct: 272 YTVGSP-EPGWRDGALNDARFNGPQGVVWR-DPHFVYVADTGNHTVREVDLEQAQVRTVA 329

Query: 696 GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD-------- 747
           G G +GSD +GG +G  Q L+SPWD+C   + + ++IAMAG HQ+W  +  D        
Sbjct: 330 GTGQRGSDLEGGRQGPQQPLSSPWDLCL--VEDILFIAMAGSHQLWALALRDSQLFGKLH 387

Query: 748 ---GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
              G     +G G E N N S  L  SFAQPSGI+  P  + + +ADSESS+IR L+L+T
Sbjct: 388 LGAGTCLRIAGSGSEENRNNSYPLRASFAQPSGIAFHPPDV-LCIADSESSAIRTLSLRT 446

Query: 805 GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKL 863
           G  + L GG  + P +LF FGD DG   +V LQHPLGV  + + Q +YVADSYNHKI+K+
Sbjct: 447 GAVKNLVGG-ALNPTDLFCFGDADGSALDVRLQHPLGVCWSSDKQLLYVADSYNHKIRKV 505

Query: 864 DPASNRVSTLAGIGKAGFKDGA-ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
           D      +TLAG G AG   G+ +   Q  EP G+       L++ADTNN+ ++ + L+ 
Sbjct: 506 DVQKRLCTTLAGTGVAGDATGSFSDEVQFDEPGGLC-VVGSRLYVADTNNHCVKLVHLDL 564

Query: 923 EEPELQTLEL 932
              E  TL L
Sbjct: 565 GFVEKVTLTL 574


>gi|428214156|ref|YP_007087300.1| thiol-disulfide isomerase-like thioredoxin [Oscillatoria acuminata
           PCC 6304]
 gi|428002537|gb|AFY83380.1| thiol-disulfide isomerase-like thioredoxin [Oscillatoria acuminata
           PCC 6304]
          Length = 506

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/490 (45%), Positives = 304/490 (62%), Gaps = 21/490 (4%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PEFP+   WLN   PL   + LKG++V+LDFWTYCCINC+H+LPDL++LE+KY +   TV
Sbjct: 9   PEFPSHQPWLNCDRPLSLAQ-LKGRIVLLDFWTYCCINCLHILPDLKYLEQKYPEY-LTV 66

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKF+NEK+ E IR A+LRY I HPV+ D +  +W++  V +WPT  ++ P G ++
Sbjct: 67  IGVHSAKFENEKETENIRQAILRYDIEHPVIVDQEFEIWQQYAVRAWPTLVLIDPLGYVV 126

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
             ++GEG R +LD+ +   +     +      P+   LEK  +P    +PL FPGK+  D
Sbjct: 127 GMVSGEGKRGELDEAIAQLIAQQQAQGSASIPPIKPLLEKQKNP--LITPLAFPGKVLAD 184

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
             ++RLFI+DS H+RI+VT L+G     IG +G  GL DGSF +A F  PQG++++A   
Sbjct: 185 AASSRLFIADSGHHRIIVTTLNGTVQSIIG-NGIPGLTDGSFSEAQFFGPQGMSWDANSQ 243

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY--QGGEKGTSQLLNSPWDVCYKPIN 727
            LYVADTENHA+R+IDF  + V+TLAG G +      QGG  G    LNSPWD+      
Sbjct: 244 RLYVADTENHAIRQIDFTTEQVQTLAGTGEQNRTQGPQGGH-GLETPLNSPWDLELIG-G 301

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           E + +AMAG HQIW    +DG    +SG G E  ++G      +FAQPSGI  + D  E+
Sbjct: 302 EVLLMAMAGSHQIWALDLMDGTVGTYSGIGAEAGMDGELD-EAAFAQPSGI--TSDDEEL 358

Query: 788 YVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           +VADSE SSIR + L      R L G       +LF FGDRDG   E L QH LG+  A+
Sbjct: 359 FVADSEISSIRGIGLGNEPRVRTLCGS-----GDLFGFGDRDGTAEEALFQHCLGIDYAE 413

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
            G ++VAD+YNHKIK + P +    T+ G G  G  DG    ++  EP G+  A +G L+
Sbjct: 414 -GLLWVADTYNHKIKTVHPKTGECKTVLGDGTPGLLDGKNTTSRFFEPGGLSIA-SGILY 471

Query: 907 IADTNNNIIR 916
           IADTNN+ IR
Sbjct: 472 IADTNNHRIR 481


>gi|91076402|ref|XP_969236.1| PREDICTED: similar to CG12547 CG12547-PA [Tribolium castaneum]
 gi|270002449|gb|EEZ98896.1| hypothetical protein TcasGA2_TC004511 [Tribolium castaneum]
          Length = 712

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/533 (42%), Positives = 319/533 (59%), Gaps = 40/533 (7%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLE 479
           +EN    PI  +F + L+W N + PL F + LKGK+VVLDF+TYCCINCMH++PDL  +E
Sbjct: 35  LENLNYHPI-KDFASGLEWFNVSEPLSFSKHLKGKIVVLDFFTYCCINCMHIIPDLREVE 93

Query: 480 KKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPT 538
           K++  +    V+GVHSAKF+NEK    I  AV RY I+HPVVND +  +W+   V+ WPT
Sbjct: 94  KEFSVEDGLVVIGVHSAKFENEKVSSNILAAVQRYNITHPVVNDFNSQMWKNCEVSCWPT 153

Query: 539 FAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTS 598
             ++GPN   +  L GEGH+++L   + AAL +Y +K  + +  +P        P L   
Sbjct: 154 LLILGPNANPIVMLMGEGHKENLRTYIRAALEYYKEKNQISDHQIPFKSAYHLLPDL-KG 212

Query: 599 PLKFPGKLAIDILNNR---LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT 655
           PL FPGK+   +  N+   L ISD+ +NRI++   DG  + Q+G SGE G RDGSF    
Sbjct: 213 PLLFPGKITNFVTKNQEEILAISDTGNNRILILKSDGTILHQVG-SGEIGFRDGSFTQCE 271

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           FN PQGL +   +N L+VADTENHA+R+ID    TV ++ G+G +G D  GG++ T Q++
Sbjct: 272 FNAPQGLVFQ-NENTLFVADTENHAIRKIDLAKKTVESVVGSGVQGHDRVGGKQWTQQVI 330

Query: 716 NSPWDVCY---------------KPINEKVYIAMAGQHQIWE---HSTV--------DGV 749
           +SPWD+C                 PI E + IAMAG HQIW     +TV         G 
Sbjct: 331 SSPWDLCIFRTPDMDMSFYPEGNPPIREILIIAMAGTHQIWALFLENTVWWKCKKYTAGT 390

Query: 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
             + +G G E N N +      FAQPSG++L     E+Y+ADSESSS+R L+L  G    
Sbjct: 391 CLSIAGSGREENKNNAYPHAAGFAQPSGLALCSKNKEVYIADSESSSVRRLSLVDGKVMP 450

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASN 868
           + GGD   P+NLF FGD+DG   +  LQH LG+  +K+   ++VAD+YNHK+KK+    N
Sbjct: 451 VVGGDR-NPNNLFAFGDKDGTLFDAKLQHLLGLAMSKDEDLLFVADTYNHKLKKVKIVEN 509

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG-NLFIADTNNNIIRYLDL 920
            VST+  +  +   DGA      SEPAG+  + +G  +++ADTNN+ ++ L L
Sbjct: 510 SVSTVT-LPASDTTDGAK-NHPFSEPAGLCVSSDGRKIYLADTNNHCVKVLTL 560



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN 911
           ++D+ N++I  L  +   +    G G+ GF+DG+    + + P G++      LF+ADT 
Sbjct: 234 ISDTGNNRILILK-SDGTILHQVGSGEIGFRDGSFTQCEFNAPQGLVFQNENTLFVADTE 292

Query: 912 NNIIRYLDLNKEEPE 926
           N+ IR +DL K+  E
Sbjct: 293 NHAIRKIDLAKKTVE 307


>gi|428297525|ref|YP_007135831.1| NHL repeat containing protein [Calothrix sp. PCC 6303]
 gi|428234069|gb|AFY99858.1| NHL repeat containing protein [Calothrix sp. PCC 6303]
          Length = 511

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/515 (42%), Positives = 327/515 (63%), Gaps = 28/515 (5%)

Query: 427 TPIV--PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           TP V  PEFP    WLNT  PL  ++ L+G+VV+LDFWTYCCINC+HVLPDL++LE+KY 
Sbjct: 2   TPRVRAPEFPKNYPWLNTDKPLSLQQ-LRGRVVILDFWTYCCINCLHVLPDLKYLEEKYA 60

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           +   TV+GVHSAKFDNEK++E IR A+LRY I HPV+ D  + +W+   V ++PT  V+ 
Sbjct: 61  N-SLTVIGVHSAKFDNEKEIENIRQAILRYDIEHPVLVDSGLRVWQSYAVRAYPTMMVIS 119

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFP 603
           P+G ++   +GEG R+ LD+L+   +  Y ++  ++   + L+LEK + P L  +PL FP
Sbjct: 120 PDGYVVDYFSGEGKREILDELINQLIQQYEQQGSINFQRIKLTLEKQSQPLL--TPLAFP 177

Query: 604 GK-LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           GK LA  +    LFI+D+ H+RI+ T  DG  ++QI   G+ G  DG F+ ATF+ PQG+
Sbjct: 178 GKVLATSV---GLFIADTAHHRIIWTKFDGE-VLQIIGVGKAGFVDGDFEAATFSTPQGM 233

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWDV 721
            ++    +LY+ADT NHALR++D  N  VRT+AG G +  + +    K     LNSPWD+
Sbjct: 234 TFDEGNQILYIADTGNHALRQVDLGNQLVRTIAGTGIQSRNIRPHCGKALETPLNSPWDL 293

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
               I   ++IA+AG HQ+W+      +   ++G G E   +G  S  + FAQPSGI  +
Sbjct: 294 V--KIKGNLWIAIAGSHQLWKMDLETHLIGTYTGTGAEACFDGELS-ESVFAQPSGI--T 348

Query: 782 PDFMEIYVADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
            D   +Y+ADSE S+IR++ + ++   + + GG     ++L+ FGD+DG+G+EV LQH L
Sbjct: 349 SDGENLYIADSEVSTIRSVGIGESAQVKSICGG-----EDLYLFGDKDGIGTEVRLQHCL 403

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           G+    N  +++AD+YNHKIK +D  S    T+ G  ++GF D     A+  EP+G +  
Sbjct: 404 GIEYIDN-SLWIADTYNHKIKLVDSQSRNCQTILGDTQSGFIDAKGTDARFFEPSG-LSY 461

Query: 901 QNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
            +  L+IADTNN+ IR ++L+    E+ T+EL G+
Sbjct: 462 WDSYLYIADTNNHAIRKVNLST--LEVTTMELPGL 494


>gi|428206267|ref|YP_007090620.1| NHL repeat containing protein [Chroococcidiopsis thermalis PCC
           7203]
 gi|428008188|gb|AFY86751.1| NHL repeat containing protein [Chroococcidiopsis thermalis PCC
           7203]
          Length = 502

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/511 (43%), Positives = 314/511 (61%), Gaps = 25/511 (4%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE P    WLNT  PL  ++ L+G++V+LDFWTYCCINC+HVLPDL++LE+KYKD   TV
Sbjct: 9   PELPQNQPWLNTDKPLSLQQ-LRGRIVILDFWTYCCINCLHVLPDLKYLEQKYKD-SLTV 66

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFDNEK++E IR A+LRY I HPV+ D    +W++  V +WPT  ++ P G ++
Sbjct: 67  IGVHSAKFDNEKEVENIRQAILRYDIEHPVLVDTGFQVWQQYAVRAWPTLMIIDPEGYVI 126

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           +  AGEG+R+ LD+L+   +  Y  K  + +  L L LEK   P   T+P+ FPGK+   
Sbjct: 127 SSAAGEGNREVLDELIAKLIQEYRDKGAIASQELSLILEKQRQP--LTTPIAFPGKVLAT 184

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
                LFI+DS H+RI+ + LDG  +  IG +G+ GL DG F  A F  PQG+  + +  
Sbjct: 185 ATG--LFIADSGHHRIIWSTLDGEILHVIG-TGKPGLTDGDFTQAQFFAPQGMVLDDENQ 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYKPINE 728
           LLY+ADTENHA+R I+     V T+AG G +  + +  G  G    LNSPWD+    +  
Sbjct: 242 LLYLADTENHAIRRINLPLQRVETIAGTGEQSRNIRPYGGIGQKIALNSPWDLTM--LKN 299

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            ++IAMAG HQIW+     G+ + ++G G E  L+G  + +++FAQPSGI  + +  E+Y
Sbjct: 300 YLFIAMAGNHQIWQMDLEKGILQTYAGTGAEACLDGLVA-DSAFAQPSGI--TTNGRELY 356

Query: 789 VADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           VADSE SSIR + L      R + G        LF FGD DG G++V LQH LG+  A+N
Sbjct: 357 VADSEGSSIRGIGLMLDPQVRTICGS-----GELFGFGDVDGTGADVRLQHCLGIESAQN 411

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             ++VAD+YNHKIK + P S    T+ G G AG  D     +  +EP+G +      L++
Sbjct: 412 F-LWVADTYNHKIKLVSPHSGNCQTILG-GVAGLHDAQGQNSCFNEPSG-LSIFGAYLYV 468

Query: 908 ADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           ADTNN+ I+ + L+     + T+E  G+  P
Sbjct: 469 ADTNNHAIKRVALDT--LTVNTMEFSGLCAP 497



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 606 LAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           L I+   N L+++D+ NH   +V+   GN    +G  G  GL D    ++ FN P GL+ 
Sbjct: 404 LGIESAQNFLWVADTYNHKIKLVSPHSGNCQTILG--GVAGLHDAQGQNSCFNEPSGLSI 461

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
                 LYVADT NHA++ +     TV T+  +G    D
Sbjct: 462 FGA--YLYVADTNNHAIKRVALDTLTVNTMEFSGLCAPD 498


>gi|440683842|ref|YP_007158637.1| NHL repeat containing protein [Anabaena cylindrica PCC 7122]
 gi|428680961|gb|AFZ59727.1| NHL repeat containing protein [Anabaena cylindrica PCC 7122]
          Length = 506

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/511 (41%), Positives = 312/511 (61%), Gaps = 24/511 (4%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE P    WLNT      + LKG++V+LDFWTYCC+NC+H+LPDL++LE+KY+D   T++
Sbjct: 8   PELPQNYPWLNTVKPLSLKSLKGRIVILDFWTYCCVNCLHILPDLKYLERKYQD-SLTII 66

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KFDNEK++E+IR A+LRY I HPV+ D +  +W    V +WPT  ++ P G ++ 
Sbjct: 67  GVHSGKFDNEKEIESIRQAILRYEIEHPVLVDNNFLVWENYTVRAWPTLIIIDPQGYVIG 126

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
           Q AGEGH + +++++    L    +  ++      +LEK + P +  +PL FPGK+    
Sbjct: 127 QFAGEGHLQAIENVI--IQLQQKNQAHINFQQFQFTLEKQHQPLI--TPLAFPGKVLAT- 181

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            ++ LFI+DS H+RIV+T  DG  +  IG +G+ GL DG+F+   F+ PQG+ ++ +  +
Sbjct: 182 -SSGLFIADSGHHRIVMTRFDGKILYVIG-TGKSGLTDGAFNQVQFSAPQGMTFDDESQI 239

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWDVCYKPINEK 729
           LY+ADTEN+ALR+ID     V T+AG G +       G       LNSPWD+  + +  K
Sbjct: 240 LYIADTENYALRQIDLQRQVVETIAGTGQQNHIISPHGGVALETALNSPWDL--QKVGNK 297

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           + IAMAG HQIWE     G    F+G G E   + S+    +FAQPSGI+ +    E+++
Sbjct: 298 LLIAMAGSHQIWEMDLERGTIETFAGTGAEGCFD-STLTECAFAQPSGITTNGQ--ELFI 354

Query: 790 ADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           ADSE SSIR + L + G  R + G        LF FGD DG   +V LQH LGV   +N 
Sbjct: 355 ADSEVSSIRGVELDEQGKVRTICGS-----GMLFGFGDMDGEKLDVRLQHCLGVEYFQN- 408

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
            ++VAD+YNHKIK + P +    T+ G G  GF+DG     + SEP+G +   +  L+I+
Sbjct: 409 YLWVADTYNHKIKLVHPTTGNCQTVLGDGLPGFQDGQGKNTRFSEPSG-LSGIDSYLYIS 467

Query: 909 DTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
           DTNN+ IR ++L  +   +QTL+  G+  P+
Sbjct: 468 DTNNHAIRRVNL--KTLTVQTLDFPGLCAPS 496


>gi|402881549|ref|XP_003904331.1| PREDICTED: NHL repeat-containing protein 2 [Papio anubis]
          Length = 688

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 252/690 (36%), Positives = 364/690 (52%), Gaps = 87/690 (12%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+V+LDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDCWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVILDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HPVVND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPVVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDDKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + NRL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTNRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R++                GS+
Sbjct: 266  PGRKDGIFSESTFNSPQGVA--IMNNIIYVADTENHLIRKL------------TKGDGSE 311

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW-----------EHSTVDGVTRA 752
             Q G                    + ++IAMAG HQIW           ++    G    
Sbjct: 312  VQRG--------------------DILWIAMAGTHQIWALLLDSGKLPKKNELTKGTCLR 351

Query: 753  FSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLL 810
            F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK G  + L
Sbjct: 352  FAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTISLKDGAVKHL 411

Query: 811  AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNR 869
             GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +DP +  
Sbjct: 412  VGGERD-PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKN 470

Query: 870  VSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE--- 924
             +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL  +    
Sbjct: 471  CTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGQLLYVADTNNHQIKIMDLETKMVSV 530

Query: 925  -PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYL 973
             P  ++          +E +   P  PKS    RL   +    QT+             L
Sbjct: 531  LPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTVCAGQTL----------QFKL 580

Query: 974  KISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-S 1028
            ++ LP     ++   S + +  E    ++   +      N+S + +  L       S+ +
Sbjct: 581  RLDLPSGSKLTEGVPSCWFLRAEGNEWLLQGQMPSGDIENISSQPTISLQIPDDCLSLEA 640

Query: 1029 TGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
               +S  +YYC  D   C+ K +LF  P Q
Sbjct: 641  IVSVSVFLYYCSADSSACMMKAILFSQPLQ 670


>gi|158293254|ref|XP_314572.4| AGAP010610-PA [Anopheles gambiae str. PEST]
 gi|157016870|gb|EAA09865.4| AGAP010610-PA [Anopheles gambiae str. PEST]
          Length = 730

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/577 (41%), Positives = 326/577 (56%), Gaps = 61/577 (10%)

Query: 399 EQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKVVV 457
           E      S + R Q+ V+    V +R    +  EFP  LDW N T PL  +  L+GKVVV
Sbjct: 30  EDLYAAGSNAGRRQKLVHDYLKVADRDGKSVTAEFPDGLDWFNVTEPLTLQGSLRGKVVV 89

Query: 458 LDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIS 516
           LDF+TYCCINCMH+LP+L+ LE  Y  +    VVGVHSAKF NEKD   IR AV RY IS
Sbjct: 90  LDFFTYCCINCMHILPNLKRLEHLYPIEEGLAVVGVHSAKFRNEKDSANIRAAVERYEIS 149

Query: 517 HPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKK 576
           HPVVND    +WR+L V  WPT  ++GP    L  + GEG+ +DL   V +A+ FY +K 
Sbjct: 150 HPVVNDNVSAMWRKLRVQCWPTLMILGPRANPLFVIMGEGNYEDLKLYVGSAIRFYREKG 209

Query: 577 LLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI------LNNRLF-ISDSNHNRIVVTD 629
            +    LP++L          S +K+PGK+A  +         +LF +SDS ++R+++ D
Sbjct: 210 EIKRHSLPINLVSSG---AIASNMKYPGKVACSVPTGAGGSEEQLFAVSDSGNHRVLIVD 266

Query: 630 LDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND 689
             G  + ++G   + G  DG+F  A FN PQG+A+    ++++VAD ENHA+R ID    
Sbjct: 267 SAGTVLHKVGGK-QSGFVDGNFTKARFNAPQGVAFQG-TDVVFVADNENHAVRRIDLKAR 324

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY-----------------KPINEKVYI 732
            V T+AGNGT+G+D  GG+ G  QLL+SPWDV                    P  + + I
Sbjct: 325 LVSTIAGNGTQGNDRTGGKVGREQLLSSPWDVAVYSTRDLDMSFHADEASAPPSKDVLLI 384

Query: 733 AMAGQHQIWEHSTVD-----------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
           AMAG HQIW     D           G   A +G+G+E+N N S   + +FAQPSG++++
Sbjct: 385 AMAGIHQIWALFLQDTIWWKFKKYGAGTCWAIAGNGHEQNRNTSYPQSAAFAQPSGLAIN 444

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
               E+Y+ADSESS+IR ++L  G    +AGGD   P +LF FGD DG       QHPLG
Sbjct: 445 RTAKEVYLADSESSAIRKISLADGKVMAVAGGDR-NPLDLFAFGDVDGKQYGAKFQHPLG 503

Query: 842 V-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           V Y  ++G IY AD+YNHKIKK+D A+N  +T        F++      + +EPAG+   
Sbjct: 504 VAYNPQDGFIYFADTYNHKIKKIDAATNCATTCE------FREANGAVRRFNEPAGLCLD 557

Query: 901 QNGN-LFIADTNNN----------IIRYLDLNKEEPE 926
           ++G  L+IADTNN+           IR L LN   PE
Sbjct: 558 RSGQLLYIADTNNHELLVANLTDCTIRPLKLNFRVPE 594


>gi|157112324|ref|XP_001657496.1| hypothetical protein AaeL_AAEL000965 [Aedes aegypti]
 gi|108883769|gb|EAT47994.1| AAEL000965-PA [Aedes aegypti]
          Length = 812

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/553 (43%), Positives = 323/553 (58%), Gaps = 51/553 (9%)

Query: 405 SSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTY 463
           S  SE+ +    Y+ + +    +  + +F   LDW N T PL F   L+GK+VVLDF+TY
Sbjct: 113 SGLSEKRKLVAEYLKNADREGKS--IRDFKEGLDWFNVTEPLSFDGCLRGKIVVLDFFTY 170

Query: 464 CCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           CCINCMH+LPDL+ LE  Y  +    V+GVHSAKF+NEKD   I +AV RY ISHPVVND
Sbjct: 171 CCINCMHILPDLKRLEHLYSVEDGLVVIGVHSAKFENEKDSANILSAVQRYEISHPVVND 230

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTP 582
              ++WR L V  WPT  ++GP    L  + GEGH  DL   V +AL FY  K  +    
Sbjct: 231 NVSSMWRNLRVQCWPTLMILGPRANPLFVIMGEGHFDDLKLYVSSALKFYKDKGAILGHT 290

Query: 583 LPLSLEKDNDPRLFTSPLKFPGKLAI-----DILNNRLF-ISDSNHNRIVVTDLDGNFIV 636
           LP+++  +    + TS L+FPGK++      D  +N L+ ISDS ++RI+V + DG  + 
Sbjct: 291 LPINVATN---LIETSHLQFPGKISSSYRGGDNTDNCLYAISDSGNHRILVVNSDGLILY 347

Query: 637 QIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG 696
           +IG     G  DG F  A FN PQG+A+      L+VAD ENHA+R+ID  +  V T+ G
Sbjct: 348 RIGGK-RAGFVDGDFRKARFNAPQGVAFQ-NDTTLFVADNENHAIRKIDLKSQQVTTVVG 405

Query: 697 NGTKGSDYQGGEKGTSQLLNSPWDVC-YK---------------PINEKVYIAMAGQHQI 740
           NG +G D  GG+ G  Q+L+SPWDV  Y+               P+ + V+IAMAG HQI
Sbjct: 406 NGQQGCDRIGGKIGRDQILSSPWDVAVYRTKDLDMSFHADESKTPLKDVVFIAMAGIHQI 465

Query: 741 WEHSTVD-----------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           W     D           G   A +G+G E N N S   N +F+QPSG++++ D  EIY+
Sbjct: 466 WALFLEDTIWWKFKKYSAGSCLAIAGNGREENRNNSYPNNAAFSQPSGLAINKDAKEIYL 525

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNG 848
           ADSESSS+R ++L  G    +AGGD   P +LF FGD DG       QHPLGV Y +K+ 
Sbjct: 526 ADSESSSVRKMSLSDGKVLAVAGGDRN-PLDLFSFGDIDGKQYSAKFQHPLGVAYNSKDN 584

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFI 907
            IYVAD+YNHKIKK++ ++N  +T +      F+D +    Q +EPAG+     G  L+I
Sbjct: 585 CIYVADTYNHKIKKINASTNVATTCS------FQDESGSTKQFNEPAGLCLDPTGRFLYI 638

Query: 908 ADTNNNIIRYLDL 920
           ADTNN+ I   DL
Sbjct: 639 ADTNNHQIMIADL 651



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 16/156 (10%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDD-------AT 655
           P  LAI+     ++++DS  + +    L    ++ +       L   SF D       A 
Sbjct: 511 PSGLAINKDAKEIYLADSESSSVRKMSLSDGKVLAVAGGDRNPLDLFSFGDIDGKQYSAK 570

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           F  P G+AYN+K N +YVADT NH +++I+   +   T +        +Q  E G+++  
Sbjct: 571 FQHPLGVAYNSKDNCIYVADTYNHKIKKINASTNVATTCS--------FQD-ESGSTKQF 621

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR 751
           N P  +C  P    +YIA    HQI      D + R
Sbjct: 622 NEPAGLCLDPTGRFLYIADTNNHQIMIADLSDNIIR 657



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%)

Query: 579 DNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI 638
           D  PL L    D D + +++  + P  +A +  +N ++++D+ +++I   +   N     
Sbjct: 550 DRNPLDLFSFGDIDGKQYSAKFQHPLGVAYNSKDNCIYVADTYNHKIKKINASTNVATTC 609

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
               E G          FN P GL  +     LY+ADT NH +   D  ++ +R L
Sbjct: 610 SFQDESG------STKQFNEPAGLCLDPTGRFLYIADTNNHQIMIADLSDNIIRPL 659



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN 911
           ++DS NH+I  ++     +  + G  +AGF DG    A+ + P G+    +  LF+AD  
Sbjct: 328 ISDSGNHRILVVNSDGLILYRIGG-KRAGFVDGDFRKARFNAPQGVAFQNDTTLFVADNE 386

Query: 912 NNIIRYLDLNKEE 924
           N+ IR +DL  ++
Sbjct: 387 NHAIRKIDLKSQQ 399


>gi|87311714|ref|ZP_01093830.1| NHL repeat protein [Blastopirellula marina DSM 3645]
 gi|87285608|gb|EAQ77526.1| NHL repeat protein [Blastopirellula marina DSM 3645]
          Length = 652

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 251/658 (38%), Positives = 364/658 (55%), Gaps = 63/658 (9%)

Query: 437  LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
            ++W+NT+     RDL+GK V+LDFWTYCCINC+H+LP+L+ LE ++ +    V+GVHSAK
Sbjct: 1    MEWMNTSGPVRLRDLRGKFVLLDFWTYCCINCIHILPELKKLEHEFPNE-LVVIGVHSAK 59

Query: 497  FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
            F+NE D + I  A+LRY I HPVVND    +W    V SWP+  ++ P G ++   +GE 
Sbjct: 60   FENEGDAKNIAEAILRYEIEHPVVNDNQHRIWNSFFVRSWPSMYLIDPEGNVVYGKSGEF 119

Query: 557  HRKDLDDLVEAALLFYGKKKLLDNTPLPLS-LEKDNDPRLFTSPLKFPGKLAIDILNNRL 615
              K++  ++  A+ +Y ++  LD TP+    L    +P    +PL+FPGK+  D  ++RL
Sbjct: 120  EAKEIAAVLNRAIPYYEQQGTLDRTPIRFELLAYSQEP----TPLRFPGKVLADEKSDRL 175

Query: 616  FISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675
            FI+DSNHNRIV+ DLDG  I  IG +G  G  DG +  A+F+  QG+A +   + LYVAD
Sbjct: 176  FIADSNHNRIVIADLDGKLIETIG-NGAIGTTDGDYATASFHHLQGMALDG--DTLYVAD 232

Query: 676  TENHALREIDFVNDTVRTLAGNGTKGSDYQGG--EKG--TSQL------------LNSPW 719
            TENH LR++D     V T+AG G +G +   G  E G   SQ+            LNSPW
Sbjct: 233  TENHMLRKVDLKTKQVTTIAGKGVQGRNSWPGIPESGLLRSQVPDRFVGKPLETALNSPW 292

Query: 720  DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS-------SSLNTSF 772
             +  K   + +YIAMAG HQIW+          ++G+G E  ++G            +SF
Sbjct: 293  ALWVK--GDDLYIAMAGPHQIWKMKLDGSEIGPYAGNGREDIVDGPLLPPIPYEQGFSSF 350

Query: 773  AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMG 831
            AQPSG  L+ D   +YVADSE SSIRA+        R + G   +    LF FGD+DG  
Sbjct: 351  AQPSG--LTSDGTWLYVADSEGSSIRAVPFDPKEKVRTVTGSAHLGSGRLFAFGDKDGSA 408

Query: 832  SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
            +E  LQH LGV C  +GQIY+AD+YN KI+  D  +  V T+AG G+ G  D    A   
Sbjct: 409  TEARLQHALGV-CYVDGQIYIADTYNCKIRVADAKTGEVRTVAGTGEHGADDA---APTF 464

Query: 892  SEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPK--SRSPK--R 947
             EPAG+  A  G L+IADTNN++IR +DL  +  +++TL + G+ PP+P    ++PK   
Sbjct: 465  DEPAGLSYAA-GKLYIADTNNHLIRTIDLKSK--QVKTLTIAGLTPPSPPKVKQTPKFSA 521

Query: 948  LRRRSSPDAQTIVVDGGLSNEGNIYL----KISL--PEEYHFSKEARSKFSVDVEPENAV 1001
                  P  +    +G ++   +I L    KI+   P  Y+   E+     +  E E   
Sbjct: 522  AEEIVLPPTKVTAANGQVNLNVDIQLPPGWKINTLAPTSYYLEGESTGPAQIAAEVELVT 581

Query: 1002 IIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYYCKE--DEVCLYKPLLFEVPFQ 1057
            + +P      P+ S  +         ST ++S + YYC+E  D +C    + + VP +
Sbjct: 582  LAEP-----KPQFSVSVPV--AGEGKSTVKLSLRYYYCEEGVDGLCKTAEVRWSVPLE 632


>gi|320103300|ref|YP_004178891.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
 gi|319750582|gb|ADV62342.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
          Length = 698

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/550 (42%), Positives = 322/550 (58%), Gaps = 28/550 (5%)

Query: 433 FPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGV 492
           F   + W+NTA      DL+GK+V++DFWTYCCINC HV+PDLE+LEKKY +    V+GV
Sbjct: 74  FDGGIAWINTANRIKLSDLRGKIVLIDFWTYCCINCHHVIPDLEYLEKKYPNE-LVVIGV 132

Query: 493 HSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQL 552
           H+AKFD E+D E IR  V  Y I HPVVND D  +W   GV SWPT A++   G+ + + 
Sbjct: 133 HTAKFDAERDTENIRRKVAEYRIKHPVVNDADQRIWSYFGVRSWPTLALIDAQGRFVGRA 192

Query: 553 AGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILN 612
           +GEGHR+ LD+++   +    K   L+ TPL  + E D   +     L +PGK+  D   
Sbjct: 193 SGEGHREALDEVIGKLIEEARKDGTLNETPLVFTPESD---KPHDGKLLYPGKVLADAQG 249

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLY 672
            RLFISD+ HNRIVVT+L+G  +  IG SG  G  DGSF+ A+FNR QG+    +   LY
Sbjct: 250 GRLFISDTGHNRIVVTNLEGKRLDVIG-SGATGFADGSFETASFNRQQGIRLVGET--LY 306

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL--LNSPWDVCYKPINEKV 730
           VADTENHA+R  +    TV T+AG G +      G +G ++   LNSPWD+   P  +++
Sbjct: 307 VADTENHAIRAANLTTRTVATVAGTGKQTYHRGWGVRGPAKTTGLNSPWDLVKIPDEDRL 366

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM--EIY 788
            IAMAG HQIW++    G    +SG G E  ++G ++   ++AQPSGI    D     +Y
Sbjct: 367 IIAMAGPHQIWDYDFSKGEIGLWSGTGREDIVDGPAN-QANYAQPSGIDFGVDDQGPAVY 425

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           VADSE S IR ++LKTG +  L G        LF FGD DG  ++  LQH LGV   + G
Sbjct: 426 VADSEVSGIRRVDLKTGTASTLIG------RGLFVFGDVDGPLAQARLQHCLGVAFDR-G 478

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
            +YVAD+YN+K+K+LD  +  + TL G G+ G  DG     +L EP G+  A +  L+IA
Sbjct: 479 VLYVADTYNNKVKQLDLKARTIITLVGDGQPG--DGEE-PGRLYEPGGVSVAGD-MLYIA 534

Query: 909 DTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNE 968
           DTN++ +   DL   +    TLE  GV+PP      P     ++   A T      L+  
Sbjct: 535 DTNHHRVVAFDLKSRQARALTLE--GVEPPARLRVKPTFALAKTLDAADT---PAPLTPG 589

Query: 969 GNIYLKISLP 978
           G++  +++LP
Sbjct: 590 GSLRFQVTLP 599


>gi|430743901|ref|YP_007203030.1| thiol-disulfide isomerase-like thioredoxin [Singulisphaera acidiphila
            DSM 18658]
 gi|430015621|gb|AGA27335.1| thiol-disulfide isomerase-like thioredoxin [Singulisphaera acidiphila
            DSM 18658]
          Length = 696

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 244/643 (37%), Positives = 346/643 (53%), Gaps = 46/643 (7%)

Query: 432  EFPAKL------DWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM 485
            E P KL      DW+N+ P++   +L+GK+V+LDFWTYCCINC HVLPDL  LE+KYKD 
Sbjct: 57   EAPPKLSLEGGVDWINSGPIRLE-ELRGKLVLLDFWTYCCINCHHVLPDLAKLEQKYKD- 114

Query: 486  PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPN 545
               V+GVHS KFD E+  E IR  V  Y I HPV+ND D  LW   G +SWPT  ++  +
Sbjct: 115  ELVVIGVHSPKFDEERQTENIRRKVAEYQIKHPVINDADQVLWNRFGADSWPTMVLIDAD 174

Query: 546  GKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGK 605
            G  + +++GEG+   LD  +   +  +  K  L+ TP   S E D   +  TSPL +PGK
Sbjct: 175  GTPIGKVSGEGNYAILDHEIGLRVAKHKAKGDLNTTPFQFSAESD---KPDTSPLLYPGK 231

Query: 606  LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
            +  D  + +LFI+D+ HNRIV+TDLDG   V +GS G  G+ DG +  A FNRPQGL   
Sbjct: 232  VLADEKSKQLFIADTAHNRIVLTDLDGRKSVVVGSGG-IGMVDGDYAKAEFNRPQGLCL- 289

Query: 666  AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
               + LYVADTENHA+R I      V T+AG G +G    G   G +  L+SPWD+   P
Sbjct: 290  -VDDTLYVADTENHAIRAIHLKTKQVSTVAGTGQQGHRRSGAGAGKATSLSSPWDLVLIP 348

Query: 726  INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
              + + IAMAG HQIW +         ++G G E   +G  S    F+QPSG  L+ D  
Sbjct: 349  GTKTLAIAMAGTHQIWRYDIPSDSVTIWAGTGQENIEDGPVS-TALFSQPSG--LATDGH 405

Query: 786  EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
             ++VADSE S+IR + L      +      I    LF F D DG G  V LQH LGV   
Sbjct: 406  NLFVADSEVSAIREIVLDKKKPVVHT----IVGQGLFVFADVDGKGDVVRLQHCLGVAYG 461

Query: 846  KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
              G++++AD+YN+KIK  +PA+  V TL G  + G  D      +  +P G+  A   NL
Sbjct: 462  -GGKLFIADTYNNKIKVCNPATRTVETLVGNKQPGLTDD---PPRFYQPGGLSVAGT-NL 516

Query: 906  FIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL 965
            ++ADTNN +IR +DL   E  ++TLE+ G+ PP P  R+P      + P A+ + ++   
Sbjct: 517  YVADTNNGLIRVVDLG--EKTVRTLEIAGLTPPAPPKRNP------TFPRAKEVTLETAQ 568

Query: 966  SNEG-NIYLKISLPE---EYHFSKEARSKFSVDVEPENAVIIDPLDG--NLSPEGSAVLH 1019
               G ++   ++LP     Y  S +    + V+   +  ++     G   L P       
Sbjct: 569  VAPGKDLTFDVTLPSLDPGYKISPDVPMSYLVETPEKIGILATTSTGGRKLDPPAEVFTI 628

Query: 1020 FRRMSPSVSTG-----RISCKVYYCKED-EVCLYKPLLFEVPF 1056
               ++ +   G     R+S K + C +D  +C  K  ++ +P 
Sbjct: 629  KVDLANATKEGDSFTIRLSVKSFVCSKDSSLCTDKNYVWTIPI 671


>gi|428304139|ref|YP_007140964.1| NHL repeat containing protein [Crinalium epipsammum PCC 9333]
 gi|428245674|gb|AFZ11454.1| NHL repeat containing protein [Crinalium epipsammum PCC 9333]
          Length = 537

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/510 (41%), Positives = 307/510 (60%), Gaps = 38/510 (7%)

Query: 431 PEFPAKLDWLNT---------APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKK 481
           PE P    W+N           PL  +  L+G++V++DFWT  CINC+HV+PDL++LE+K
Sbjct: 29  PELPQNFTWINCDREAAREGDRPLSIK-SLRGRIVIIDFWTKSCINCLHVIPDLKYLEQK 87

Query: 482 YKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAV 541
           Y     T++GVHSAKF++E+  ++++ AV RYGI+HPV+ D D  +W++  V +WPTF V
Sbjct: 88  YSKY-LTIIGVHSAKFEHEQHPDSVQQAVWRYGITHPVIVDSDRYIWQQYAVKAWPTFVV 146

Query: 542 VGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLK 601
           +   G ++A ++GEG R+ LD+LV+  +     ++ +D   L L+LE D   RL  SPL 
Sbjct: 147 INATGYIVATVSGEGKREFLDNLVQQLIEESSGQRTVDQESLQLNLEPDQTLRL--SPLA 204

Query: 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
           FP K+     +N LFI+D+ H+R+V+  L+G     IG +G     DG  + A F  P G
Sbjct: 205 FPSKVIACQQSNSLFIADTGHHRLVIASLNGETQAVIG-TGSPAWVDGDLEIAQFCEPMG 263

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD-YQGGEKGTSQLLNSPWD 720
           + ++ ++ ++YVADT NH LR+ID     V T+AGNGT+    +  G K     LNSPWD
Sbjct: 264 MVFDYEQQVIYVADTVNHLLRKIDLKTRQVSTIAGNGTQSRYLFPHGGKALETALNSPWD 323

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +    I +K+YI MAG HQIW           F G G E  ++GS  +  +FAQPSGI+ 
Sbjct: 324 LV--KIKDKLYITMAGSHQIWMMDLAQETIHCFIGTGAEFCVDGSYEV-AAFAQPSGITT 380

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF-----PDNLFKFGDRDGMGSEVL 835
           + D  E+++ADSESSSIRA+ L         G  PI         LF FGD DG+G  V 
Sbjct: 381 NGD--ELFIADSESSSIRAVTL---------GDFPIVRTICGSGQLFGFGDVDGIGENVR 429

Query: 836 LQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           LQH LG+ Y A  G ++V D+YNHK+K+++P +    T+ G GKAG +DG       SEP
Sbjct: 430 LQHCLGITYGA--GYLWVTDTYNHKLKRVNPTTGECQTICGSGKAGLQDGFGTDVYFSEP 487

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
           +G+  A N  L+IAD+NN+ IR ++LN +E
Sbjct: 488 SGLAFACN-YLYIADSNNHAIRRINLNSQE 516



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           L+++D+ ++++   +        I  SG+ GL+DG   D  F+ P GLA+    N LY+A
Sbjct: 443 LWVTDTYNHKLKRVNPTTGECQTICGSGKAGLQDGFGTDVYFSEPSGLAFAC--NYLYIA 500

Query: 675 DTENHALREIDFVNDTVRTL 694
           D+ NHA+R I+  +  V T 
Sbjct: 501 DSNNHAIRRINLNSQEVTTF 520


>gi|21593742|gb|AAM65709.1| unknown [Arabidopsis thaliana]
          Length = 299

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/244 (79%), Positives = 216/244 (88%), Gaps = 8/244 (3%)

Query: 66  TDVNVSSES--------KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDF 117
           T ++V++ES         WGKVSAVLFDMDGVLCNSE+ SRRAAVDVF EMGVEVTV+DF
Sbjct: 53  TKLSVAAESPAATIATDDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDF 112

Query: 118 LPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQC 177
           +PFMGTGEA FLGGVASVK VKGFD +AAKKRFFEIYLDKYAKP SGIGFPGALEL+ +C
Sbjct: 113 VPFMGTGEAKFLGGVASVKEVKGFDPDAAKKRFFEIYLDKYAKPESGIGFPGALELVTEC 172

Query: 178 KSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237
           K+KGLKVAVASSADRIKVDANL AAGL ++MFDAIVSADAFENLKPAPDIFL+A+KIL V
Sbjct: 173 KNKGLKVAVASSADRIKVDANLKAAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGV 232

Query: 238 PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297
           PTSEC+VIEDALAGVQAA+AA MRCIAV TTLSE  LK+A PS+IR +IG++S+NDILTG
Sbjct: 233 PTSECVVIEDALAGVQAAQAANMRCIAVKTTLSEAILKDAGPSMIRDDIGNISINDILTG 292

Query: 298 GGGS 301
           G  S
Sbjct: 293 GSDS 296


>gi|428304361|ref|YP_007141186.1| NHL repeat containing protein [Crinalium epipsammum PCC 9333]
 gi|428245896|gb|AFZ11676.1| NHL repeat containing protein [Crinalium epipsammum PCC 9333]
          Length = 491

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/506 (41%), Positives = 303/506 (59%), Gaps = 36/506 (7%)

Query: 431 PEFPAKLDWLNT---------APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKK 481
           PE P    W+N           PL  +  L+G++V++DFWT  CINC+HV+PDL++LE+K
Sbjct: 7   PELPQNFTWINCDREAASEGDRPLSIK-SLRGRIVIIDFWTKGCINCLHVIPDLKYLEQK 65

Query: 482 YKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAV 541
           Y +   T++GVHSAKF++E+  +++R AV RY I+HPV+ D D  +W +  V +WPTF V
Sbjct: 66  YSEY-LTIIGVHSAKFEHEQHPDSVRQAVWRYEITHPVIVDSDRYIWEQYAVRAWPTFVV 124

Query: 542 VGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLK 601
           +   G ++A + GEG R+ LD+LV+  +     KK +D      +LE +   RL  SPL 
Sbjct: 125 INSQGYIVATVRGEGKREFLDNLVQQLIEESSGKKTVDGQSGKFTLEPNQTLRL--SPLA 182

Query: 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
           FP K+     +N LFI+D+ H+R+V+  LDG     IG +G  G  DG  + A F  P G
Sbjct: 183 FPSKVIACQQSNSLFIADTGHHRLVIASLDGETKAVIG-TGSAGWVDGDLEIAQFCEPMG 241

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD-YQGGEKGTSQLLNSPWD 720
           + +N ++ ++YVADT NH LR+ID     V TLAG GT+    +  G K     LNSPWD
Sbjct: 242 MVFNHEQQVIYVADTVNHLLRKIDLKTRQVSTLAGTGTQSRYLFPHGGKALETALNSPWD 301

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +    I +++YI MAG HQIW     +   +   G G E  +NGS  +  +FAQPSGI+ 
Sbjct: 302 LV--KIKDQLYITMAGSHQIWMMDLTEKTIQTLIGTGAEFCVNGSCDI-AAFAQPSGITT 358

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF-----PDNLFKFGDRDGMGSEVL 835
           + D  E+++ADSE+SSIRA+ L         G  P+         LF FGD DG+G  V 
Sbjct: 359 NGD--ELFIADSETSSIRAVTL---------GNFPVVRTICGSGQLFGFGDVDGIGENVR 407

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           LQH LGV  A +G ++V D+YNHK+K+++P +    T++G GKAG +DG       SEP+
Sbjct: 408 LQHCLGVAYA-SGYLWVTDTYNHKLKRVNPTTGECQTMSGSGKAGLQDGIGKDVYFSEPS 466

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLN 921
           G+  A N  L+IAD+NN+ IR ++LN
Sbjct: 467 GLSYACN-YLYIADSNNHAIRRINLN 491



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 842 VYCAKNGQIYVADSYNHK--IKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGII- 898
           + C ++  +++AD+ +H+  I  LD  +  V    G G AG+ DG    AQ  EP G++ 
Sbjct: 188 IACQQSNSLFIADTGHHRLVIASLDGETKAV---IGTGSAGWVDGDLEIAQFCEPMGMVF 244

Query: 899 EAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
             +   +++ADT N+++R +DL     ++ TL   G Q
Sbjct: 245 NHEQQVIYVADTVNHLLRKIDLKTR--QVSTLAGTGTQ 280


>gi|320103301|ref|YP_004178892.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
 gi|319750583|gb|ADV62343.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
          Length = 676

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/635 (37%), Positives = 355/635 (55%), Gaps = 45/635 (7%)

Query: 439  WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
            W+NTA      DL+GK+V+LDFWTYCCINC H+LPDLE+LE KY +    V+G+HS KF 
Sbjct: 45   WINTADRIKLSDLRGKIVLLDFWTYCCINCHHILPDLEYLEDKYPNQ-LVVLGIHSPKFP 103

Query: 499  NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
             E+D+E +R  V  Y I HPV  D +  +W+ LG+++WPT  ++   G+ + +L GEGHR
Sbjct: 104  AERDIENVRRKVAEYRIKHPVAQDSNQRVWKTLGIDTWPTLILLDARGREVLRLKGEGHR 163

Query: 559  KDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFIS 618
              LD+ +   +  +  +  L+ TPL  + E +  P    +PL +PGK+      + LFI+
Sbjct: 164  GTLDEAIARLIAVHRARGELNETPLVFTPESEK-PANRETPLLYPGKVV--AAGDSLFIA 220

Query: 619  DSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTEN 678
            D+ HNRIV+  LDG+    +G +G+ G+RDG+++ A+FNRPQG+  +A +N LYVADTEN
Sbjct: 221  DTGHNRIVIAGLDGSLKAVVG-NGKIGMRDGAYERASFNRPQGIRLDALRNRLYVADTEN 279

Query: 679  HALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL--LNSPWDVCYKPINEKVYIAMAG 736
            HA+R ID    +V T+AG G     Y G   G ++   LNSPWD+   P   +  +AMAG
Sbjct: 280  HAIRAIDLTTRSVTTVAGTGEM--VYPGLPGGPARRFGLNSPWDLVQIPETNQFLVAMAG 337

Query: 737  QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796
             HQI++       T  FSG G E   +G +    ++AQPSG  L+ D   ++VADSE+SS
Sbjct: 338  THQIYKIDFDQNATVVFSGSGIEEITDGPAP-RAAYAQPSG--LTTDGRIVFVADSETSS 394

Query: 797  IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
            IR L+ +TG  R L G        LF FGD +G  +   LQH L V  A NG++YVAD+Y
Sbjct: 395  IRLLDPQTGAVRTLLG------KGLFDFGDVEGGLTRARLQHCLAVEYA-NGKLYVADTY 447

Query: 857  NHKIKKLD--PASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
            N+KIK +D    +  + TL G  + G  D      +  +P G +    G L++ADTNN+ 
Sbjct: 448  NNKIKVIDFSARTKTIRTLVGDRRRGDTDD---PPRFDQPGG-LSVLGGQLYVADTNNHK 503

Query: 915  IRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIY-- 972
            IR +DL      ++TL + G+ PP  +   P      S P AQ I +   L   G+ Y  
Sbjct: 504  IRVVDLATL--AVKTLTIDGLTPPPLERFKP------SFPLAQKITLPETLVKPGDAYKL 555

Query: 973  -LKISLPEEYHFSKEARSKFSVDVEPENAVI---IDPLDGNLSPE-GSAVLHFRRMSPSV 1027
             + ++LP  + F  +   ++ ++   ++  +   +DP  G L P      L     +P  
Sbjct: 556  EVALTLPNGFQFGPDTPIQYLIETPGQSDALGTALDPNGGELRPPLDRFTLDLPLRTPLA 615

Query: 1028 S----TGRISCKVYYCKEDE-VCLYKPLLFEVPFQ 1057
            +    T  +S   + C++ +  C  + +++ +P +
Sbjct: 616  AGETLTVTLSVATFLCRKSQGFCQPRSVIWTIPLR 650


>gi|110737585|dbj|BAF00734.1| hypothetical protein [Arabidopsis thaliana]
          Length = 299

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/244 (78%), Positives = 216/244 (88%), Gaps = 8/244 (3%)

Query: 66  TDVNVSSES--------KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDF 117
           T ++V++ES         WGKVSAVLFDMDGVLCNSE+ SRRAAVDVF EMGVEVTV+DF
Sbjct: 53  TKLSVAAESPAATIATDDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDF 112

Query: 118 LPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQC 177
           +PFMGTGEA FLGGVASVK VKGFD +AAK+RFFEIYLDKYAKP SGIGFPGALEL+ +C
Sbjct: 113 VPFMGTGEAKFLGGVASVKEVKGFDPDAAKERFFEIYLDKYAKPESGIGFPGALELVTEC 172

Query: 178 KSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237
           K+KGLKVAVASSADRIKVDANL AAGL ++MFDAIVSADAFENLKPAPDIFL+A+KIL V
Sbjct: 173 KNKGLKVAVASSADRIKVDANLKAAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGV 232

Query: 238 PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297
           PTSEC+VIEDALAGVQAA+AA MRCIAV TTLSE  LK+A PS+IR +IG++S+NDILTG
Sbjct: 233 PTSECVVIEDALAGVQAAQAANMRCIAVKTTLSEAILKDAGPSMIRDDIGNISINDILTG 292

Query: 298 GGGS 301
           G  S
Sbjct: 293 GSDS 296


>gi|269926393|ref|YP_003323016.1| alkyl hydroperoxide reductase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790053|gb|ACZ42194.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Thermobaculum terrenum ATCC BAA-798]
          Length = 493

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/496 (44%), Positives = 291/496 (58%), Gaps = 25/496 (5%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+FP  L W NT       DL+GK+V+LDFWTYCCINCMH+LP L  LE+KY D    V+
Sbjct: 13  PDFPGGLKWFNTDRHISLADLRGKIVILDFWTYCCINCMHILPHLRKLEEKYPD-ELVVI 71

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHSAKF  E+    IRNA+ RY + HPVVND ++ +W E  V +WPT   + P G+++ 
Sbjct: 72  GVHSAKFMAERSDTGIRNAIRRYSVRHPVVNDANLQIWSEYAVRAWPTLYFIDPTGRIVG 131

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
              GE    +LD+++   +  Y    +LD TP+  + E     R     L FPGK+    
Sbjct: 132 MHEGEIRFPELDNIISQMIQEYDSLGILDRTPIRFNAE-----RAPEGILAFPGKVLALE 186

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
             + L+I+DSNHNRI+   L G  I +I  +GEEGL DGS  +A FN PQG+A   + N 
Sbjct: 187 DEDSLYIADSNHNRILECSLSGK-IRRIWGNGEEGLVDGSASEAKFNHPQGMA--IRGNE 243

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGS--DYQGGEKGTSQLLNSPWDVCYKPINE 728
           LYVADTENHALR +      V T+AG G +G    +Q    G    LNSPWD+  + +N+
Sbjct: 244 LYVADTENHALRLLHLNEGKVETIAGTGEQGYPISFQ-PSIGKYTELNSPWDL--EIVND 300

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            +YIAMAG HQIW      GV R  +G   E   +G +S     AQPSG  L+ D   +Y
Sbjct: 301 VLYIAMAGCHQIWAMEMPSGVVRPLAGTAREGIKDGPASA-AWLAQPSG--LTTDGQLLY 357

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
            ADSE+SSIR L+  +G    L G D      LF+FGD DG+G  V LQHPL V     G
Sbjct: 358 FADSETSSIRLLDPASGRVETLVGID------LFEFGDVDGVGGMVRLQHPLDVEW-HAG 410

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
           ++Y+ADSYN+KIK LDP +    T  G GK   +DG    A L+EP G + A +  L++A
Sbjct: 411 KLYIADSYNNKIKILDPHTRECRTWVGSGKQELRDGTRQDASLAEPGG-LSATSRYLYVA 469

Query: 909 DTNNNIIRYLDLNKEE 924
           DTNN+ IR +D +  E
Sbjct: 470 DTNNHAIRIVDFSTGE 485



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           ++    L ++    +L+I+DS +N+I + D           SG++ LRDG+  DA+   P
Sbjct: 397 VRLQHPLDVEWHAGKLYIADSYNNKIKILDPHTRECRTWVGSGKQELRDGTRQDASLAEP 456

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
            GL+  A    LYVADT NHA+R +DF    V TL
Sbjct: 457 GGLS--ATSRYLYVADTNNHAIRIVDFSTGEVSTL 489



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 6/88 (6%)

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIA 908
           +Y+ADS +++I +    S ++  + G G+ G  DG+A  A+ + P G+  A  GN L++A
Sbjct: 191 LYIADSNHNRILECS-LSGKIRRIWGNGEEGLVDGSASEAKFNHPQGM--AIRGNELYVA 247

Query: 909 DTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           DT N+ +R L LN  E +++T+   G Q
Sbjct: 248 DTENHALRLLHLN--EGKVETIAGTGEQ 273


>gi|119569872|gb|EAW49487.1| NHL repeat containing 2, isoform CRA_a [Homo sapiens]
          Length = 683

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 242/693 (34%), Positives = 359/693 (51%), Gaps = 98/693 (14%)

Query: 406  SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYC 464
            +Q E+      Y+  V+  +    VPEFP  L+WLNT  P+   +DL GK+VVLDF+TYC
Sbjct: 30   TQQEKDSLVYQYLQKVDGWEQDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC 89

Query: 465  CINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+H+LPDL  LE  Y D     ++GVHSAKF NEK L+ I++AVLRY I+HP+VND 
Sbjct: 90   CINCIHLLPDLHALEHTYSDKDGLLIIGVHSAKFPNEKVLDNIKSAVLRYNITHPMVNDA 149

Query: 524  DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL 583
            D +LW+EL V+ WPT  ++GP G +L  L GEGH+  L      AL +Y  +  + +  +
Sbjct: 150  DASLWQELEVSCWPTLVILGPRGNMLFSLIGEGHKDKLFLYTSIALKYYKDRGQIRDNKI 209

Query: 584  PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
             + L KD+ P    SPL FPGK+ +D + +RL I+D+ H+RI+V   +G     IG    
Sbjct: 210  GIKLYKDSLP---PSPLLFPGKVTVDQVTDRLVIADTGHHRILVVWKNGQIQYSIGGP-N 265

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G +DG F ++TFN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D
Sbjct: 266  PGRKDGIFSESTFNSPQGVAI--MNNIIYVADTENHLIRKIDLEAEKVSTIAGIGIQGTD 323

Query: 704  YQGGEKGTSQLLNSPWDVCYKPINEK----VYIAMAGQHQIW-----------EHSTVDG 748
             +GG KG  Q ++SPWDV +     +    ++IAMAG HQIW           ++    G
Sbjct: 324  KEGGAKGEQQPISSPWDVVFGTSEVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELTKG 383

Query: 749  VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGG 806
                F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R ++LK G 
Sbjct: 384  TCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGA 443

Query: 807  SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
             + L GG+            RD M                             IK +DP 
Sbjct: 444  VKHLVGGE------------RDPM-----------------------------IKVVDPK 462

Query: 867  SNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGNL-FIADTNNNIIRYLDLNKEE 924
            +   +TLAG G       ++   +  +EP G+   +NG L ++ADTNN+ I+ +DL  + 
Sbjct: 463  TKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKM 522

Query: 925  ----PELQT----------LELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGN 970
                P  ++          +E +   P  PKS    RL   ++   QT+           
Sbjct: 523  VSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSAPSIRLSPVTACAGQTL----------Q 572

Query: 971  IYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPS 1026
              L++ LP     ++   S + +  E    ++   +      N+S + +  L       S
Sbjct: 573  FKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDDCLS 632

Query: 1027 V-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
            + +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 633  LEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 665


>gi|328783461|ref|XP_396242.3| PREDICTED: NHL repeat-containing protein 2 [Apis mellifera]
          Length = 699

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/570 (38%), Positives = 317/570 (55%), Gaps = 48/570 (8%)

Query: 395 RPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKG 453
           R S E       Q E + + +   S+   R     + +F A L+W N T  L   R L G
Sbjct: 24  RGSLELLLDRKEQKELVLRHIKTFSNKNTR-----IADFQAGLEWFNVTEELSLYRHLNG 78

Query: 454 KVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT----VVGVHSAKFDNEKDLEAIRNA 509
           K+++LDF+TYCCINCMH+LPDL+ LEK++   P T    V+GVHSAKF NE+D + + +A
Sbjct: 79  KIIILDFFTYCCINCMHILPDLDDLEKRF---PITDGLVVIGVHSAKFSNERDSKRLLSA 135

Query: 510 VLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           + RY I HPVVND  ++ WR LG++ WPT  ++GP G+LLA   GEGHR +L   VE AL
Sbjct: 136 IQRYNIKHPVVNDKTLSAWRNLGISCWPTLLMIGPTGELLAVFVGEGHRDELILFVEVAL 195

Query: 570 LFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR----LFISDSNHNRI 625
            ++     +    LPL LE      +    L FP KL  +I  N     L I+D+ +NRI
Sbjct: 196 TYFKSLNKISKNDLPLQLECHLLATVDNKNLLFPSKL--EIFQNEQGENLIIADTGNNRI 253

Query: 626 VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
           ++ D  GN    IG S  +  RDG F++A FN PQG+        +YVAD ENHA+R+ID
Sbjct: 254 LIVDTKGNVQHVIGGSNPD-FRDGDFENARFNAPQGVC--ILDTFIYVADNENHAIRKID 310

Query: 686 FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY------KPINEKVYIAMAGQHQ 739
            +   V T+ G G +G DY GG+ G  Q+L+SPWD+        K I   + IAMAG HQ
Sbjct: 311 LIKKMVTTVVGTGIQGHDYIGGKIGKDQILSSPWDLAIYKYEYNKNIIPILLIAMAGTHQ 370

Query: 740 IWEHSTVD-----------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           IW     D           G   A  G G E N N         AQPSG++++ +    +
Sbjct: 371 IWALFLEDTIWWKKREYKAGTCIAIVGSGKEENRNNLYPHTAGLAQPSGLTVNKERKIAF 430

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKN 847
            ADSESS+IR+++L++G   ++ G +   P +L  +GD DG+     LQHPLG+ + +K+
Sbjct: 431 FADSESSAIRSIDLESGQVSVVCGANR-NPVDLHDYGDSDGIKYAAKLQHPLGITWHSKD 489

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNLF 906
             +Y+ D+YNHKIKK+D  +    T+ G GK   K          EP+GI I ++   L+
Sbjct: 490 NAVYITDTYNHKIKKIDVTTQNCKTIYGDGKPNEK------FSFDEPSGIAISSEKDLLY 543

Query: 907 IADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           +ADTNN+ ++ +D  KE     ++ +  ++
Sbjct: 544 VADTNNHEVKVIDTKKENITTLSINISTIE 573


>gi|326493576|dbj|BAJ85249.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 308

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/228 (81%), Positives = 209/228 (91%)

Query: 76  WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV 135
           WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV+V V+DF+PF GTGEANFLGGVA V
Sbjct: 79  WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVDVNVDDFIPFTGTGEANFLGGVARV 138

Query: 136 KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
           KGVK F +E+AKKRFFEIYL+KYAKPNSGIGFPGALELI +CK+ GLKVAVASSADR+KV
Sbjct: 139 KGVKDFSTESAKKRFFEIYLEKYAKPNSGIGFPGALELIMECKNAGLKVAVASSADRVKV 198

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           DANLAAAGLPVS+FDAIVSADAFENLKPAPDIFL+ASK L V T ECIVIEDALAGVQAA
Sbjct: 199 DANLAAAGLPVSLFDAIVSADAFENLKPAPDIFLAASKNLGVDTDECIVIEDALAGVQAA 258

Query: 256 KAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGGSYN 303
           +AA++RCIAVTT+L E+ L++ASP  IRK+IG +S+NDIL GG  +Y+
Sbjct: 259 EAAEIRCIAVTTSLDEDALRQASPVFIRKDIGDISINDILCGGSNAYH 306


>gi|168702582|ref|ZP_02734859.1| NHL repeat [Gemmata obscuriglobus UQM 2246]
          Length = 599

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/526 (44%), Positives = 312/526 (59%), Gaps = 44/526 (8%)

Query: 431 PEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE    + WLN+A PL  ++DLKGK+V+LDFWT CCINC+H++PDL  LEKKY +    V
Sbjct: 95  PELDGGVAWLNSAGPLTLKKDLKGKIVILDFWTLCCINCIHIMPDLAKLEKKYPNE-LVV 153

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF+NEKD  +IR A+LRY I HPVVND D  LW +  V++WPTF V+ P G L+
Sbjct: 154 IGVHSPKFENEKDTASIRKAILRYQIEHPVVNDADHKLWNKFQVDAWPTFVVIDPEGNLV 213

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
              +GEG+ + LD +V   +  + KKK LD  P+   L K  +     +PL FPGK+  D
Sbjct: 214 GYTSGEGNYELLDVVVGKLVDEHKKKKTLDEKPIRFDLAKFRE--TGDTPLFFPGKVVAD 271

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
               RLFI+DS H+R+VVTDL GN +  IG +G  G  DG FD A F+ PQG+A   + +
Sbjct: 272 EPGRRLFIADSTHHRVVVTDLAGNKLHVIG-TGAPGKTDGPFDKAQFDDPQGMA--VRGD 328

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-------LNSPWDVC 722
            L+VAD +NH +REID    TV T+AGNGT+  D++   +  +Q        LNSPWD+ 
Sbjct: 329 TLFVADRKNHLVREIDLKAKTVATIAGNGTQ--DHEAESRRLTQPVPAKEIGLNSPWDLW 386

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                +K+YIAMAG HQIW     +     ++G+G E   +G       FAQPSG++   
Sbjct: 387 LG--GDKLYIAMAGHHQIWALDLKEKNLIPYAGNGRETIGDGPLR-RAMFAQPSGLTSDG 443

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG----------S 832
            F+  YVADSE S+IR + L   G       + +    LF FGD DG G          +
Sbjct: 444 KFL--YVADSEISAIRKVPLDPEGKV-----ETLVGRGLFVFGDVDGAGQAADGPLAAKT 496

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
           E  LQH LGV  A +G++++AD+YN KIK  D  S  V T  G    G+  G  L    +
Sbjct: 497 EARLQHALGVAHA-DGKLFIADTYNSKIKTYDLKSGEVKTFLGGRPLGWF-GPDL---FN 551

Query: 893 EPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
           EPAGI  A  G L++ADTN + IR +D+  +   + TL LKGV+PP
Sbjct: 552 EPAGISYA-GGKLYVADTNAHRIRVVDVATK--TVTTLHLKGVEPP 594


>gi|195387367|ref|XP_002052367.1| GJ17513 [Drosophila virilis]
 gi|194148824|gb|EDW64522.1| GJ17513 [Drosophila virilis]
          Length = 736

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 247/627 (39%), Positives = 346/627 (55%), Gaps = 60/627 (9%)

Query: 432  EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVV 490
            EF   LDW N +       L+GK+VVLDF+TYCCINCMHVLP+L  LE+++  +    VV
Sbjct: 58   EFEPDLDWFNVSRPLTLAGLRGKIVVLDFFTYCCINCMHVLPELRALEERFPVESGLVVV 117

Query: 491  GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
            GVHS KF+NE+    I +A  RYGI HP+VND    LWR L +  WP+  V+ P+G  + 
Sbjct: 118  GVHSPKFENERTAANILSAAQRYGIKHPIVNDSKSALWRALSIRCWPSLLVLSPSGLPML 177

Query: 551  QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
             L GEGH + L D V AAL F+G+++ +D   LPL L  D  P    S L+FP K+A  +
Sbjct: 178  LLMGEGHGEFLHDFVGAALSFFGRQQKIDAFSLPLHLSTDLLP---ASNLRFPAKIA--M 232

Query: 611  LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
             N+   I+D+ +NR++V    G    ++G   E G  DG+ + A FN PQG+A+   K+ 
Sbjct: 233  FNDYYAIADAGNNRVLVVTTSGVVEYKVGGL-EAGFVDGNLNTARFNNPQGVAF-LDKDT 290

Query: 671  LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY------- 723
            L VADT+NHALR+I   +  V TLAG G +G+D  GG+ G  Q ++SPWDV         
Sbjct: 291  LIVADTDNHALRQISLKSGAVETLAGTGCQGNDRTGGKLGPLQPISSPWDVSVFRTRDMD 350

Query: 724  ------------KPINEKVYIAMAGQHQIWEHSTVDGVT----RAFS--------GDGYE 759
                        KPI   V IAMAG HQIW +   +G+     R F         G+G E
Sbjct: 351  MSFHVDELNVPEKPI---VLIAMAGTHQIWGYFP-EGIIWWKFRKFEPRCCVSLIGNGLE 406

Query: 760  RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
             N N S   N +FAQPSG+++S D++  ++ADSESSSIR  ++  G    + GGD   P 
Sbjct: 407  ENRNNSYPQNAAFAQPSGLAMSNDYL--FIADSESSSIRKASMVDGKVMPVVGGDR-NPL 463

Query: 820  NLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
            NLF FGD DG      LQHPLGV +   + ++YVAD+YNHKIK +D  +N +STL     
Sbjct: 464  NLFAFGDEDGKLYNAKLQHPLGVAFNQIDRKLYVADTYNHKIKVIDTDTNIISTLV---- 519

Query: 879  AGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQP 937
               KD + LA    EP+GI ++A+   L +ADTNN+ I  +DL     +   L+ K +  
Sbjct: 520  IKNKDDSILA--FREPSGICVDAEGNRLLVADTNNHTIHIIDLATHTAQPFLLDFKQISS 577

Query: 938  PTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGN-IYLKISLPEEYHFSKEARSKFSVDVE 996
             +        LR   +   + I +   L + G+ I   I L  +  F+ +A  K+++ + 
Sbjct: 578  TSETDAPLTSLRGVGAQLVKNIPL---LQHRGSTINFSIRLSSDLKFTADAPQKWTMKI- 633

Query: 997  PENAVIIDPLDGNLSPEGSAVLHFRRM 1023
               A+ +    G L+ EG   LH R +
Sbjct: 634  INPALEMKHTCGKLT-EGKCSLHIRHL 659


>gi|350403739|ref|XP_003486886.1| PREDICTED: NHL repeat-containing protein 2-like [Bombus impatiens]
          Length = 696

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/520 (43%), Positives = 304/520 (58%), Gaps = 42/520 (8%)

Query: 430 VPEFPAKLDWLNTAP-LQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-F 487
           + +F   L+W N A  L   + LKGK+V+LDF+TYCCINCMHVL DL+ LEK +      
Sbjct: 52  IIDFQPGLEWFNVAEGLSIYQHLKGKIVILDFFTYCCINCMHVLSDLDVLEKLFSIQDGL 111

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            +VGVHSAKF NEK+ + + +AV RY I HPVVND  M++WR LG+  WPT  ++GP G+
Sbjct: 112 VIVGVHSAKFSNEKNSKKLLSAVQRYNIKHPVVNDTKMSMWRYLGIVCWPTLVMLGPTGE 171

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
           LLA   GEGHR +L   V  AL ++     +    +PL L +   P + T  + FP KL 
Sbjct: 172 LLAVFVGEGHRDELIIHVGVALTYFRSLNKIHTNDIPLQLAQHLLP-VGTGNILFPSKL- 229

Query: 608 IDILNN----RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
            +IL N     L I+D+ HNRI+VTD  GN    IG    +  +DG F+ A FN PQG++
Sbjct: 230 -EILQNDQGESLVIADTGHNRILVTDTTGNVQHIIGGPNPD-FKDGDFETAKFNAPQGVS 287

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDV-C 722
                +L+YVADT+NHA+R+ID +   V T+AG G KG DY GG+ G  Q+L+SPWD+  
Sbjct: 288 --TLGSLIYVADTKNHAIRKIDLMRRIVITIAGTGIKGHDYVGGKIGKDQVLSSPWDLAV 345

Query: 723 YKP-----INEKVYIAMAGQHQIWE---HSTV--------DGVTRAFSGDGYERNLNGSS 766
           YK      I   + IAMAG HQIW      T+        +G   A  G G E N N S 
Sbjct: 346 YKHEHDNNITPILLIAMAGNHQIWALFLEDTIWWKNKKYNEGTCLAIVGSGTEENRNNSY 405

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG--DPIFPDNLFKF 824
             +   AQPSGI+++ +      ADSESSSIR++NL+TG    + GG  DP+   +L  +
Sbjct: 406 PHSAGLAQPSGITIAEELKLAVFADSESSSIRSINLQTGQVSAICGGSRDPL---DLHGY 462

Query: 825 GDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
           GD DG+   V LQHPLG+ +  K   IY+ D+YNHKIK ++  +    TL G    G   
Sbjct: 463 GDLDGVNYSVKLQHPLGIAWHPKEKIIYITDTYNHKIKIINVTTKHCRTLYG---GGIPH 519

Query: 884 GAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNK 922
              L     EP+GI I  + G +F+ADTNN+ ++ +D  K
Sbjct: 520 DIYL---FDEPSGIAICPEKGLIFVADTNNHAVKMMDTEK 556



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 11/194 (5%)

Query: 631 DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDT 690
           +G  +  +GS  EE   +     A   +P G+    +  L   AD+E+ ++R I+     
Sbjct: 386 EGTCLAIVGSGTEENRNNSYPHSAGLAQPSGITIAEELKLAVFADSESSSIRSINLQTGQ 445

Query: 691 VRTLAGNGTKGSDYQG-GE---KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
           V  + G      D  G G+      S  L  P  + + P  + +YI     H+I   +  
Sbjct: 446 VSAICGGSRDPLDLHGYGDLDGVNYSVKLQHPLGIAWHPKEKIIYITDTYNHKIKIINVT 505

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
               R   G G   ++         F +PSGI++ P+   I+VAD+ + +++ ++ + G 
Sbjct: 506 TKHCRTLYGGGIPHDI-------YLFDEPSGIAICPEKGLIFVADTNNHAVKMMDTEKGN 558

Query: 807 SRLLAGGDPIFPDN 820
              L    PI  D+
Sbjct: 559 ITTLPINIPIIEDD 572



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 10/118 (8%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           PL L    D D   ++  L+ P  +A       ++I+D+ +++I         I+ + + 
Sbjct: 456 PLDLHGYGDLDGVNYSVKLQHPLGIAWHPKEKIIYITDTYNHKIK--------IINVTTK 507

Query: 642 GEEGLRDGSF--DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
               L  G    D   F+ P G+A   +K L++VADT NHA++ +D     + TL  N
Sbjct: 508 HCRTLYGGGIPHDIYLFDEPSGIAICPEKGLIFVADTNNHAVKMMDTEKGNITTLPIN 565


>gi|194877446|ref|XP_001973882.1| GG16549 [Drosophila erecta]
 gi|190657069|gb|EDV54282.1| GG16549 [Drosophila erecta]
          Length = 717

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 246/648 (37%), Positives = 353/648 (54%), Gaps = 59/648 (9%)

Query: 397  SFEQTEGGSSQSERIQQFVN-YISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKV 455
            ++  + G + ++  I +F++ +  D+   K   +  EF + LDW N +       L+GKV
Sbjct: 23   AYRSSNGENEKTRTINKFLDRWNDDISIAKLKGLTVEFESDLDWFNVSSPLSVTGLQGKV 82

Query: 456  VVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYG 514
            +VLDF+TYCCINCMHVLP+L  LE+++  +    V+GVHS KF+NE+    I +AVLRYG
Sbjct: 83   IVLDFFTYCCINCMHVLPELHSLEERFPIETGIVVIGVHSPKFENERSATNIVSAVLRYG 142

Query: 515  ISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGK 574
            ISHP+VND    +WR +G+  WP+  ++ P G  +  L GEGH K L D V AAL F+ +
Sbjct: 143  ISHPIVNDSRSGMWRAIGIRCWPSLLILSPTGVPMMLLMGEGHGKFLQDFVAAALSFFSR 202

Query: 575  KKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNF 634
            +  +D+  LP+ L  D  P    S L+FP K+ +   N R  I+D+ +NR++V  L G  
Sbjct: 203  QGQIDHRGLPIKLFSDFQP---ASNLRFPAKI-VRSPNGRYAIADTGNNRVLV--LTGGG 256

Query: 635  IVQIGSSG-EEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRT 693
            +VQ    G + G  DG+   A FN PQG+A+   +N L VADT+NHA+R+I   N  V T
Sbjct: 257  VVQHKIGGYQPGFVDGNSTAARFNNPQGIAF-LNENTLIVADTKNHAIRQISLTNGMVET 315

Query: 694  LAGNGTKGSDYQGGEKGTSQLLNSPWDVCY--------------KPINEK--VYIAMAGQ 737
            LAG G +G++  GG  G  Q L+SPWDV                + I EK  V I+MAG 
Sbjct: 316  LAGTGHQGNERIGGRLGPLQPLSSPWDVAIFRTRDMDMSFHLDERNIPEKTIVLISMAGT 375

Query: 738  HQIWEHSTVDGVT----RAFS--------GDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
            HQIW +   +G+     R F         G+G E N N S   N +FAQPSG++++ D +
Sbjct: 376  HQIWGYFP-EGIIWWKFRKFEPLCCVSLIGNGLEENRNNSYPQNAAFAQPSGLAIAGDVL 434

Query: 786  EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YC 844
              Y+ADSESSSIR  ++  G    + GGD   P +LF FGD DG      LQHPLGV + 
Sbjct: 435  --YIADSESSSIRKASMIDGKVMPVVGGDR-NPLDLFAFGDIDGRLFNAKLQHPLGVSFN 491

Query: 845  AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG- 903
              N ++YVAD+YNHKIK +D  SN +STL        K         +EPAG+    NG 
Sbjct: 492  DANNRLYVADTYNHKIKVIDIDSNDISTLQ------IKSQENTNMIFNEPAGLCLDANGR 545

Query: 904  NLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDG 963
            NL +ADTNN+ I  +DL     +   L+   +   +         +   +   +T+ +D 
Sbjct: 546  NLLVADTNNHSIYIIDLVTLIAQPFRLDFSQLASASETDAPQDAQKTMENNIIRTLPLD- 604

Query: 964  GLSNEGNIYLKISLPEEYHFSKEARSKF-------SVDVEPENAVIID 1004
             L     I+  + L    +F+KEA  K+       SV + P +  ++D
Sbjct: 605  -LIKPSKIFFNLRLSPRLNFTKEAPQKWILKTVCQSVKINPSSGTLLD 651


>gi|116007528|ref|NP_001036460.1| CG12547, isoform A [Drosophila melanogaster]
 gi|442622271|ref|NP_001260704.1| CG12547, isoform B [Drosophila melanogaster]
 gi|17945781|gb|AAL48938.1| RE33981p [Drosophila melanogaster]
 gi|30923523|gb|EAA46001.1| CG12547, isoform A [Drosophila melanogaster]
 gi|220948326|gb|ACL86706.1| CG12547-PA [synthetic construct]
 gi|440214080|gb|AGB93239.1| CG12547, isoform B [Drosophila melanogaster]
          Length = 717

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 246/649 (37%), Positives = 364/649 (56%), Gaps = 57/649 (8%)

Query: 397  SFEQTEGGSSQSERIQQFVN-YISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKGK 454
            +++ ++G + ++  I +F++ +  D+   K   +  EF + L+W N + PL  +  L+GK
Sbjct: 23   AYKSSKGENEKAGTIVKFLDRWNDDISIAKLKDLTVEFESDLEWFNVSCPLSIK-GLQGK 81

Query: 455  VVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRY 513
            V++LDF+TYCCINCMHVL +L  LE+++  +    V+GVHS KF+NE++   I +AV RY
Sbjct: 82   VIILDFFTYCCINCMHVLQELHLLEERFPIESGVVVIGVHSPKFENERNAANILSAVQRY 141

Query: 514  GISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573
            GISHP+VND    +WR LG+  WP+  ++ P G  +  L GEGH K L D   +AL ++ 
Sbjct: 142  GISHPIVNDSRSGMWRALGIRCWPSLLILSPTGVPMMLLMGEGHGKFLQDFFSSALSYFS 201

Query: 574  KKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGN 633
            ++ ++D+  LPL L  D  P    S L+FP K+ +   N    I+D+ +NR++V    G 
Sbjct: 202  RQGIIDHRGLPLKLFNDFQP---ASNLRFPAKI-VQGPNGLYAIADTGNNRVLVLTAGGV 257

Query: 634  FIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRT 693
               +IG   + G  DG    A FN PQG+A+   +N+L VADT+NHA+R+I   N  V T
Sbjct: 258  VQHRIGGH-QPGFVDGDLTVARFNNPQGIAF-LNENVLIVADTKNHAIRQISLTNAMVET 315

Query: 694  LAGNGTKGSDYQGGEKGTSQLLNSPWDVCY--------------KPINEK--VYIAMAGQ 737
            LAG G +G+D  GG  G  Q L+SPWDV                + I EK  + I+MAG 
Sbjct: 316  LAGTGIQGNDRIGGRLGPLQPLSSPWDVAIFRTRDMDMSFHLDERNIPEKTIILISMAGT 375

Query: 738  HQIWEHSTVDGVT----RAFS--------GDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
            HQIW +   +G+     R F         G+G E N N S   N +FAQPSG++++ D +
Sbjct: 376  HQIWGYFP-EGIIWWKFRKFEPCCCVSLIGNGLEENRNNSYPQNAAFAQPSGLAIAGDVL 434

Query: 786  EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YC 844
              Y+ADSESSSIR  ++  G    + GGD   P NLF FGD DG      LQHPLGV + 
Sbjct: 435  --YIADSESSSIRKASMIDGKVMPVVGGDR-NPLNLFAFGDIDGRLFSAKLQHPLGVTFN 491

Query: 845  AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNG 903
              N ++YVAD+YNHKIK +D  SN +STL        K        L+EPAG+ ++A   
Sbjct: 492  DTNNKLYVADTYNHKIKIIDIDSNDISTLQ------IKSQENTNLILNEPAGLCLDASGR 545

Query: 904  NLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIV--V 961
            NL +ADTNN+ I  +DL     +   L+ + +   + +  +P+  ++   P    IV  +
Sbjct: 546  NLLVADTNNHSIHTIDLVTLIAQPFGLDFRQIASAS-EIDAPQDTQK---PTENNIVKAL 601

Query: 962  DGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNL 1010
               L     I+  + L   ++F+KEA  K+ V    + +VI++P  GNL
Sbjct: 602  PLDLIKPSKIFFNLRLSPRFNFTKEAPQKWIVKTVCQ-SVIVNPTCGNL 649


>gi|269837841|ref|YP_003320069.1| alkyl hydroperoxide reductase [Sphaerobacter thermophilus DSM
           20745]
 gi|269787104|gb|ACZ39247.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Sphaerobacter thermophilus DSM 20745]
          Length = 494

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/504 (43%), Positives = 292/504 (57%), Gaps = 25/504 (4%)

Query: 418 ISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           ++D    + T   PEFP   +W NT  PL+   DL+GK+V+LDFWTYC INC+H+LP L 
Sbjct: 1   MADYSAFRGTVRAPEFPPG-EWFNTTRPLEIS-DLRGKIVILDFWTYCUINCLHMLPQLR 58

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
            LE+++ D    V+GVHS KF  E+  E++R A+ RY + HPVVND ++ +W    V +W
Sbjct: 59  ELERRFPD-ELVVIGVHSPKFPAERRSESLRAAIQRYHVHHPVVNDANLEVWTRYAVRAW 117

Query: 537 PTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF 596
           PT   V P G+++ +  GE   +DL  +V   +  Y  + L+D +P+P  L+    P   
Sbjct: 118 PTLMFVDPEGRVIGRHEGEASAEDLARVVRELVDQYDAQGLIDRSPIP-GLQPMAPPE-- 174

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
              L FPGK+  D   +RL ++DS H+R++V  LDG+    IG SGE GLRDG    A F
Sbjct: 175 -GTLAFPGKVLADAATDRLIVADSGHHRLIVARLDGSDAWVIG-SGEAGLRDGPGAIAAF 232

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
           + PQGLA     + LYVADT NH +R +D    TV T+AG G  G  Y       +  L 
Sbjct: 233 HDPQGLALYG--DTLYVADTRNHVVRRVDLAARTVETIAGTGHIGWSYARAGAARAIDLR 290

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SPWD+     +  +YIAMAG HQIW     +   R ++G G E ++   +      AQPS
Sbjct: 291 SPWDLVLH--DGVLYIAMAGMHQIWALDLDEAELRPYAGSGRE-SIRDHTLQRAWLAQPS 347

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           G  L+ D   +YVADSE+S++R +    G   R L G        LF FGD DG+G EV 
Sbjct: 348 G--LATDGRLLYVADSETSAVRTVTFPPGDEVRTLVG------TGLFDFGDVDGIGDEVR 399

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           LQHPL V C  +G +YVADSYNHKIK+LDPA+ R  T  G G+ G  DG   AA+  EP 
Sbjct: 400 LQHPLAVACG-DGVLYVADSYNHKIKRLDPATRRCETWLGSGEPGDADGTGTAARFHEPG 458

Query: 896 GIIEAQNGNLFIADTNNNIIRYLD 919
           G+  A +  L+IADTNN+ IR  D
Sbjct: 459 GLSLAGS-RLYIADTNNHAIRVAD 481



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           ++    LA+   +  L+++DS +++I   D           SGE G  DG+   A F+ P
Sbjct: 398 VRLQHPLAVACGDGVLYVADSYNHKIKRLDPATRRCETWLGSGEPGDADGTGTAARFHEP 457

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
            GL+    +  LY+ADT NHA+R  D     V TL
Sbjct: 458 GGLSLAGSR--LYIADTNNHAIRVADTTTGAVTTL 490



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 845 AKNGQIYVADSYNHK--IKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
           A   ++ VADS +H+  + +LD +   V    G G+AG +DG    A   +P G+     
Sbjct: 187 AATDRLIVADSGHHRLIVARLDGSDAWV---IGSGEAGLRDGPGAIAAFHDPQGL-ALYG 242

Query: 903 GNLFIADTNNNIIRYLDLNKEEPE 926
             L++ADT N+++R +DL     E
Sbjct: 243 DTLYVADTRNHVVRRVDLAARTVE 266


>gi|195119117|ref|XP_002004078.1| GI18254 [Drosophila mojavensis]
 gi|193914653|gb|EDW13520.1| GI18254 [Drosophila mojavensis]
          Length = 734

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 262/674 (38%), Positives = 367/674 (54%), Gaps = 76/674 (11%)

Query: 408  SERIQQFVNYISDVENR-------------------KTTPIVPEFPAKLDWLNTAPLQFR 448
            +E++QQ  NY+S+  N+                   K   +  EF   LDW N +     
Sbjct: 17   TEQLQQ--NYLSNRANKAKIFDEFLGRWDANDSSLAKVKSLNFEFETDLDWFNVSRPLTL 74

Query: 449  RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIR 507
              L+GK+VVLDF+TYCCINCMHVLP+L  LE+++  +    VVGVHS KF+NE+    I 
Sbjct: 75   AGLRGKLVVLDFFTYCCINCMHVLPELRALEERFPVESGLVVVGVHSPKFENERTAANIL 134

Query: 508  NAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEA 567
            +A  RYGI HP+VND    LWR L +  WP+  V+ P G  +  L GEGH + L +   A
Sbjct: 135  SAAQRYGIKHPIVNDSKSALWRALSIRCWPSLLVLSPGGMPMLLLMGEGHGEFLREFAGA 194

Query: 568  ALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVV 627
            AL F+ +++ L+ + LPL L  D  P    S L+FP K+A  +L ++  I+D+ +NRI+V
Sbjct: 195  ALSFFDRQQKLNFSSLPLQLSTDLLP---ASNLRFPAKIA--MLEDQYAIADAGNNRIIV 249

Query: 628  TDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFV 687
                G    +IG   E G  DGS + + FN PQG+A+   KN L VADT+NHALR+I   
Sbjct: 250  VTNCGVVKYKIGGL-EAGFVDGSLNMSRFNNPQGVAF-LDKNTLIVADTDNHALRQISLN 307

Query: 688  NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY----------------KPINEKVY 731
            N  V TLAG G++G++  GG+ G  Q L+SPWDV                   P    V 
Sbjct: 308  NGVVETLAGTGSQGNERTGGKLGPLQPLSSPWDVSVFRTRDMDMSFHLDELNVPEKTIVL 367

Query: 732  IAMAGQHQIWEHSTVDGVT----RAFS--------GDGYERNLNGSSSLNTSFAQPSGIS 779
            IAMAG HQIW +   +G+     R F         G+G E N N S   N +FAQPSG++
Sbjct: 368  IAMAGTHQIWGYFP-EGIIWWKFRKFEPRCCVSLIGNGLEENRNNSYPQNAAFAQPSGLA 426

Query: 780  LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
            +S D++  Y+ADSESSSIR  ++  G    + GGD   P NLF FGD DG      LQHP
Sbjct: 427  MSSDYL--YIADSESSSIRKASMVDGKVMPVVGGDR-NPLNLFAFGDEDGKLYNAKLQHP 483

Query: 840  LGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI- 897
            LGV Y   + ++YVAD+YNHKIK++D  +N +STL        KDG+ LA  L EP+G+ 
Sbjct: 484  LGVAYNNVDRKLYVADTYNHKIKQVDTETNIISTLT----IKNKDGSTLA--LREPSGLC 537

Query: 898  IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQ 957
            ++A    L +ADTNN+ I  +DL     E   L+   +   T ++ +P+ L + S  +  
Sbjct: 538  VDADRNRLLVADTNNHGIHIIDLATLTAEPFLLDFNQIT-NTTETDAPRSLSKVSGLELV 596

Query: 958  TIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVD-VEPENAVIIDPLDGNLSPEGSA 1016
              +      N  NI   + L  +  F+ +A  K+ V  + P  A+ I+ L+G L+ EG  
Sbjct: 597  KKIPVLHYRN-CNINFSMRLSSDLKFTPDAPQKWMVKFLNP--ALEINQLNGILA-EGKC 652

Query: 1017 VLHF-RRMSPSVST 1029
             L    + S S+ T
Sbjct: 653  SLQLNNKSSKSIRT 666


>gi|255513298|gb|EET89564.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 579

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/512 (42%), Positives = 305/512 (59%), Gaps = 33/512 (6%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEFP    WLN        DL+G VVVLDFWTYCCINCMH+   LE LE  Y+  P  ++
Sbjct: 84  PEFPKGFKWLNATRQISMSDLRGCVVVLDFWTYCCINCMHMAHTLEKLEDYYRGKPVVII 143

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHSAKF NE+D   I+ A+ RY + HPV+ D  M++W E  VNSWPT  ++GP+GK+  
Sbjct: 144 GVHSAKFKNEQDSNNIKEAISRYEMRHPVIVDEKMHMWHEYFVNSWPTLVIIGPDGKIKY 203

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
           + AGE     +  +++  L   G    L   P  +  E+++  R     L++PGKL +  
Sbjct: 204 KRAGEATPGMISAIIDHILEESGPS--LAKEPPKIFAEQEHSAR----KLRYPGKLCMSP 257

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
              ++ IS+SN N IV+ D     ++    +G +GL DGSF+ + F RPQGL +    N 
Sbjct: 258 DGTKIAISNSNANEIVIIDAKSLAVLDTAGNGAKGLSDGSFETSEFYRPQGLEWVG--NR 315

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGS-----DYQGGEKGTSQLLNSPWDVCYKP 725
           +Y+ADTEN+A+REI+  + TV T+ G G  G      D+  G K +   +NSPWD+ Y  
Sbjct: 316 IYIADTENNAVREINLDDRTVATVLGTGRLGQPGSPWDFSAGTKIS---INSPWDLSYDE 372

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
            +  ++IAMAG HQIWE+   DG    ++G+  E  ++G+     SFAQPSGI +  D  
Sbjct: 373 KSGSLFIAMAGTHQIWEYIMRDGTAAPYAGNCAENIIDGNLK-EASFAQPSGIWV--DGN 429

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           EIYVADSE+S+IR++N+K G +  + G        LF FGD+DG  +   LQHP+GV  A
Sbjct: 430 EIYVADSEASAIRSINMKDGYASTITG------SGLFTFGDQDGSLASARLQHPIGV-SA 482

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTL-AGIGKAG---FKDGAALAAQLSEPAGIIEAQ 901
           K+G IYVAD+YN  I+++D  +NR++TL +G G+     F D      QL EP   ++  
Sbjct: 483 KDGLIYVADTYNSAIREIDVKANRITTLVSGPGRKSACRFGDPKCDTLQLYEPND-VKPF 541

Query: 902 NGNLFIADTNNNIIRYLDLNKEEPELQTLELK 933
              L IADTNNN+IR  D+  +E  L+TL++K
Sbjct: 542 GRALIIADTNNNLIRRFDI--DEKILETLQIK 571


>gi|340725457|ref|XP_003401086.1| PREDICTED: NHL repeat-containing protein 2-like [Bombus terrestris]
          Length = 692

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/528 (42%), Positives = 308/528 (58%), Gaps = 44/528 (8%)

Query: 430 VPEFPAKLDWLNTAP-LQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-F 487
           + +F   L+W N A  L   + LKGK+V+LDF+TYCCINCMHVL DL+ LEK +      
Sbjct: 48  ITDFQPGLEWFNVAEGLSIYQHLKGKIVILDFFTYCCINCMHVLSDLDVLEKLFSIQDGL 107

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            +VGVHSAKF NEK+ + + +A+ RY I HPVVND  M++W  LG+  WPT  ++GP G+
Sbjct: 108 VIVGVHSAKFPNEKNSKKLLSAIQRYNIKHPVVNDTTMSMWHYLGIVCWPTLIMLGPTGE 167

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
           LLA   GEGHR +L   V  AL ++     +    +PL L +   P +    + FP K  
Sbjct: 168 LLAVFVGEGHRDELIIHVGVALTYFRSLNKIHTNDIPLQLAQHLLP-VGNGNILFPSK-- 224

Query: 608 IDILNNR----LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
           ++IL       L ++D+ HNRI+V D  GN    IG    +  RDG+F+ A FN PQG++
Sbjct: 225 VEILQTEQGENLVVADTGHNRILVMDTAGNVQHIIGGPNPD-FRDGNFEIAKFNGPQGMS 283

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC- 722
                +++YVADT+NHA+R+ID +  TV T+AG GTKG+DY GG+ GT Q+L SPWD+  
Sbjct: 284 --TLDSVIYVADTKNHAIRKIDLIKKTVITIAGTGTKGNDYNGGKIGTDQVLASPWDLAI 341

Query: 723 YKP-----INEKVYIAMAGQHQIWE---HSTV--------DGVTRAFSGDGYERNLNGSS 766
           YK      I   + IAMAG HQIW      T+        +G   A  G G E N N + 
Sbjct: 342 YKHEHGNNITPILLIAMAGNHQIWALFLEDTIWWKNKKYKEGTCLAIVGSGTEENRNNTY 401

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            L    AQPSGI+++        ADSESS+IR+LNL+TG    + GG    P +L  +GD
Sbjct: 402 PLLAGLAQPSGITIAEVLKIAVFADSESSAIRSLNLQTGQVVHICGGSR-NPLDLHDYGD 460

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKD 883
            DG+   V LQHPLG+ +  K   IY+ D+YNHKIK ++ ++ +   + G+G   A F  
Sbjct: 461 TDGVNYGVKLQHPLGIAWHPKENIIYITDTYNHKIKIINVSTKQCKAIYGVGIPHASF-- 518

Query: 884 GAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTL 930
                    EP+GI I A+ G ++IADTNN+ ++   +N E   + TL
Sbjct: 519 ------LFDEPSGIAINAEKGLIYIADTNNHAVKM--INTERGNITTL 558



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 6/116 (5%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           PL L    D D   +   L+ P  +A     N ++I+D+ +++I + ++      Q  + 
Sbjct: 452 PLDLHDYGDTDGVNYGVKLQHPLGIAWHPKENIIYITDTYNHKIKIINVSTK---QCKAI 508

Query: 642 GEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
              G+   SF    F+ P G+A NA+K L+Y+ADT NHA++ I+     + TL  N
Sbjct: 509 YGVGIPHASF---LFDEPSGIAINAEKGLIYIADTNNHAVKMINTERGNITTLPIN 561



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%)

Query: 631 DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDT 690
           +G  +  +GS  EE   +     A   +P G+       +   AD+E+ A+R ++     
Sbjct: 382 EGTCLAIVGSGTEENRNNTYPLLAGLAQPSGITIAEVLKIAVFADSESSAIRSLNLQTGQ 441

Query: 691 VRTLAGNGTKGSDYQ--GGEKGTSQ--LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
           V  + G      D    G   G +    L  P  + + P    +YI     H+I   +  
Sbjct: 442 VVHICGGSRNPLDLHDYGDTDGVNYGVKLQHPLGIAWHPKENIIYITDTYNHKIKIINVS 501

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
               +A  G G       +S L   F +PSGI+++ +   IY+AD+ + +++ +N + G 
Sbjct: 502 TKQCKAIYGVGIPH----ASFL---FDEPSGIAINAEKGLIYIADTNNHAVKMINTERGN 554

Query: 807 SRLLAGGDPIFPDN 820
              L    P+  D+
Sbjct: 555 ITTLPINIPVIEDD 568


>gi|298245110|ref|ZP_06968916.1| NHL repeat containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297552591|gb|EFH86456.1| NHL repeat containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 496

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/493 (43%), Positives = 294/493 (59%), Gaps = 23/493 (4%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+FP  L W+N+  L   ++L+G++V+L FWT+CCINCMH L  L  +E+ + D   +++
Sbjct: 12  PDFPTNLAWINSDHLLSLKELRGRIVILHFWTFCCINCMHALAQLREIEEAFPDT-LSII 70

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
            +HS KF  E    ++ NAVLRYG+ HPVVND  M LW++  V +WPT   + P G+++ 
Sbjct: 71  SIHSPKFPGEHFTGSVHNAVLRYGVEHPVVNDHTMYLWQQYAVRAWPTLVFIDPEGRVIG 130

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
           +  GE       DL+   L  +  + LLD+  L  S      P  F   L FPGKLA+D 
Sbjct: 131 KHEGEISPTQGKDLLRQMLEEFEARGLLDHRQLRFS--AATAPSSF---LAFPGKLAVDA 185

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
             +RL ISDS H+R+V T+L G     IG SG +G  DGSF +A FN PQG+A     +L
Sbjct: 186 QADRLIISDSAHHRLVETNLQGRVRTIIG-SGVQGQADGSFAEAQFNHPQGVAL--VNDL 242

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWDVCYKPINE 728
           LYVADT+NH +R +D     V TLAG G +    +   +G ++   L+SPWD+      E
Sbjct: 243 LYVADTDNHLIRRVDLRTKQVETLAGTGEQNGMVRTRLQGPARSIALSSPWDLV--AFEE 300

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           K+YIAMAG H+I+  +   G    F+G G E   +G       FAQP+GI+L      +Y
Sbjct: 301 KLYIAMAGMHRIFVLNLATGEIEPFAGAGPEALRDGPRD-EALFAQPTGITLDVASQVLY 359

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
            ADSE+S+IRA+ L TG  ++      +    LF FGD DG+G E  LQH  G+ CA NG
Sbjct: 360 SADSEASAIRAIEL-TGEQQV----HTLVGTGLFDFGDVDGIGEEAQLQHVQGI-CAANG 413

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFI 907
            +Y+AD+YN++IK LDP +  V TLAG G+AG  +G A  AQ +EP  +  A  GN L+I
Sbjct: 414 LLYLADTYNNRIKALDPQTREVRTLAGTGEAGIHNGPAEQAQFNEPGDL--AITGNTLYI 471

Query: 908 ADTNNNIIRYLDL 920
           ADTNN+ IR LD+
Sbjct: 472 ADTNNHAIRLLDM 484



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 121/277 (43%), Gaps = 31/277 (11%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P  LA +A+ + L ++D+ +H L E + +   VRT+ G+G +G     G    +Q  N P
Sbjct: 178 PGKLAVDAQADRLIISDSAHHRLVETN-LQGRVRTIIGSGVQGQ--ADGSFAEAQF-NHP 233

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS-G 777
             V    +N+ +Y+A    H I             +G G +  +     + T    P+  
Sbjct: 234 QGVAL--VNDLLYVADTDNHLIRRVDLRTKQVETLAGTGEQNGM-----VRTRLQGPARS 286

Query: 778 ISLSPDF------MEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           I+LS  +       ++Y+A +    I  LNL TG     AG  P   + L     RDG  
Sbjct: 287 IALSSPWDLVAFEEKLYIAMAGMHRIFVLNLATGEIEPFAGAGP---EAL-----RDGPR 338

Query: 832 SEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLD-PASNRVSTLAGIGKAGFKD--GAAL 887
            E L   P G+      Q+ Y ADS    I+ ++     +V TL G G   F D  G   
Sbjct: 339 DEALFAQPTGITLDVASQVLYSADSEASAIRAIELTGEQQVHTLVGTGLFDFGDVDGIGE 398

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
            AQL    GI  A NG L++ADT NN I+ LD    E
Sbjct: 399 EAQLQHVQGICAA-NGLLYLADTYNNRIKALDPQTRE 434



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           N  L+++D+ +NRI   D     +  +  +GE G+ +G  + A FN P  LA     N L
Sbjct: 412 NGLLYLADTYNNRIKALDPQTREVRTLAGTGEAGIHNGPAEQAQFNEPGDLAITG--NTL 469

Query: 672 YVADTENHALREIDFVNDTVRTL 694
           Y+ADT NHA+R +D     + TL
Sbjct: 470 YIADTNNHAIRLLDMATRNITTL 492



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN 904
           A+  ++ ++DS +H++ + +    RV T+ G G  G  DG+   AQ + P G+    N  
Sbjct: 185 AQADRLIISDSAHHRLVETN-LQGRVRTIIGSGVQGQADGSFAEAQFNHPQGVALV-NDL 242

Query: 905 LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSR--SPKRLRRRSSP 954
           L++ADT+N++IR +DL  ++ E  TL   G Q    ++R   P R    SSP
Sbjct: 243 LYVADTDNHLIRRVDLRTKQVE--TLAGTGEQNGMVRTRLQGPARSIALSSP 292


>gi|414866495|tpg|DAA45052.1| TPA: hypothetical protein ZEAMMB73_628261 [Zea mays]
          Length = 355

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/255 (75%), Positives = 212/255 (83%), Gaps = 1/255 (0%)

Query: 51  GRRMVVKACVTKVEETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV 110
           GRR VV A            +  + WGKVSAVLFDMDGVLCNSEEPSR+A VDVFAEMGV
Sbjct: 49  GRRDVVAAAAASAPSPSSPGTEVAVWGKVSAVLFDMDGVLCNSEEPSRQAGVDVFAEMGV 108

Query: 111 EVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGA 170
           EV V+DF+PFMGTGEANFLGGVA  KGVK F+ E+AKKRFFEIYLDKYAKPNSGIGFPGA
Sbjct: 109 EVAVDDFVPFMGTGEANFLGGVARAKGVKDFNPESAKKRFFEIYLDKYAKPNSGIGFPGA 168

Query: 171 LELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230
           LELI +CK+ GLKVAVASSADRIKVDANLAAAGL V +FDAIVSADAFE LKPAPDIFL+
Sbjct: 169 LELILECKNSGLKVAVASSADRIKVDANLAAAGLSVFLFDAIVSADAFEKLKPAPDIFLA 228

Query: 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290
           ASK L V T+ECIVIEDALAGVQAA AA+MRCIAVTTTL E  L++ SPS IRK IG +S
Sbjct: 229 ASKSLGVDTNECIVIEDALAGVQAANAAEMRCIAVTTTLEEIALRQGSPSFIRKNIGDIS 288

Query: 291 LNDILTGGGGS-YNE 304
           +NDIL GG  + +NE
Sbjct: 289 INDILYGGSNARHNE 303


>gi|410976139|ref|XP_003994481.1| PREDICTED: NHL repeat-containing protein 2 [Felis catus]
          Length = 637

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 248/686 (36%), Positives = 359/686 (52%), Gaps = 105/686 (15%)

Query: 437  LDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHS 494
            L+WLNT  P+   +DL GKVV+LDF+TYCCINC+H+LPDL  LE  Y D     +VGVHS
Sbjct: 7    LEWLNTEEPISVYKDLCGKVVILDFFTYCCINCIHLLPDLHALEHTYSDKDGLLIVGVHS 66

Query: 495  AKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAG 554
            AKF NEK L+ I++AVLRY I+HPVVND D +LW+EL V+ WPT  ++GP G +L  L G
Sbjct: 67   AKFPNEKVLDNIKSAVLRYNITHPVVNDADASLWQELEVSCWPTLVILGPRGNMLFSLIG 126

Query: 555  EGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR 614
            EGH+  L      AL +Y  +  + N  + + L KD+ P    SPL FPGK+ +D ++N+
Sbjct: 127  EGHKDKLFLYTSIALKYYKDRGQIRNHKIEIKLYKDSLP---PSPLLFPGKVTVDHVSNK 183

Query: 615  LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
            L I+D+ H+RI+V   +G     IG+                                  
Sbjct: 184  LVIADTGHHRILVVLKNGQIQYSIGA---------------------------------- 209

Query: 675  DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV---- 730
                + + +ID   + V T+AG G +G+D +GG KG  Q ++SPWDV       +V    
Sbjct: 210  ----YFIVKIDLEAEMVSTVAGIGIQGTDKEGGAKGEEQPISSPWDVVLGTSGSEVQRDD 265

Query: 731  --YIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
              +IAMAG HQIW           ++    G    F+G G E N N +      FAQPSG
Sbjct: 266  ILWIAMAGTHQIWALLLDSGRLPKKNELQKGTCLRFAGSGNEENRNNAYPHKAGFAQPSG 325

Query: 778  ISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            +SL+ +  +  ++VADSESS++RA++L+ G  R L GG+   P NLF +GD DG+G +  
Sbjct: 326  LSLASEEPWRCLFVADSESSTVRAVSLRDGAVRHLVGGER-DPMNLFAYGDVDGVGIDAK 384

Query: 836  LQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLSE 893
            LQHPLGV +  K   +YVADSYNHKIK +DP +   +TLAG G A     ++   +  +E
Sbjct: 385  LQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDASNVITSSFTESTFNE 444

Query: 894  PAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT----------PKS 942
            P G+   +NG  L++ADTNN+ I+ +DL     E +T+ +  V  P            K 
Sbjct: 445  PGGLCIGENGQLLYVADTNNHQIKVMDL-----ETKTISVLPVFRPENAVVDGPFLGEKQ 499

Query: 943  RSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVI 1002
            ++  +L  +S+P+ Q   V           L++ LP     ++   S + +  E    + 
Sbjct: 500  KTLPKL-PKSAPNIQLPPVAASPGQTLQFKLRLDLPSGTKLTEGVPSCWFLTAEGNEWL- 557

Query: 1003 IDPLDGNLSPEGSAVLHFRRMSPSVSTG------------RISCKVYYCKEDE-VCLYKP 1049
               L G +    S V+      P++S               IS  +YYC  D   C+ K 
Sbjct: 558  ---LQGQIP---SGVIESISSQPAISLQIPGDCLSLEAILSISVFLYYCSTDSNACMMKG 611

Query: 1050 LLFEVPFQEEVPNSPPAEITLPYDLK 1075
            ++F  P Q  + ++ P  I  P +LK
Sbjct: 612  IMFSQPLQ--ITSAQPGCIA-PVELK 634


>gi|116754580|ref|YP_843698.1| NHL repeat-containing protein [Methanosaeta thermophila PT]
 gi|116666031|gb|ABK15058.1| NHL repeat containing protein [Methanosaeta thermophila PT]
          Length = 504

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/499 (42%), Positives = 296/499 (59%), Gaps = 31/499 (6%)

Query: 422 ENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKK 481
           ++R    I PEFP  L WLNT      RDL+G+ V++DFWTYCCINCMHV+ DL+ LE++
Sbjct: 21  QSRANPMIAPEFPEDLVWLNTDRRYTLRDLRGRFVLIDFWTYCCINCMHVVTDLKMLEER 80

Query: 482 YKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAV 541
           Y ++   V+GVH+AKF+NE  +E I  A++RYGI HPV+ D D  LWR  G+ +WP+F +
Sbjct: 81  YPEL--VVIGVHTAKFENEMRVENIEKAIMRYGIEHPVIVDSDRTLWRAYGIRAWPSFVL 138

Query: 542 VGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN-TPLPLSLEKDNDPRLFTSPL 600
           + P+G++L + +GEG    L  ++E  +  Y K+  L +  P P +  K       +  L
Sbjct: 139 IAPDGEILGRTSGEGIFSILMPIMEQLIPEYEKRGSLHHGKPAPRATHKG-----VSGAL 193

Query: 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
            FPGK+      + +FI+DSN+NRI++   DG+ +  IG SGE G  DG F +A   RPQ
Sbjct: 194 SFPGKVISG--GDNIFIADSNNNRILIVSPDGDLMDVIG-SGERGYSDGDFSEARLFRPQ 250

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWD 720
           G+A     +++Y+ADT NH +R  D    T+  +AG G       GG +G    L+SPWD
Sbjct: 251 GIAIVG--DVVYIADTGNHMVRAADLRRRTLVRMAGTGKSRHPGLGG-RGAEVSLSSPWD 307

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           + +  + + +YIAMAG HQIW    ++G+   ++G G E   +G        AQPSG  L
Sbjct: 308 LVF--VQDHLYIAMAGSHQIWRMD-LEGMVEPYAGSGIEGLADGPLE-QARLAQPSG--L 361

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
           + D   IY  DSESSS+R ++   G  R L G D      LF FGD DG      LQHPL
Sbjct: 362 TTDGNRIYFVDSESSSLRVID---GDVRTLIGRD------LFYFGDIDGDFGRARLQHPL 412

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           G++  K G IYVAD+YNH+IKK D +S  + T AG G  GF DG    A  +EP+G+   
Sbjct: 413 GLFY-KEGSIYVADTYNHRIKKADLSSGSIHTTAGTGSPGFADGPGAQAAFNEPSGLTFL 471

Query: 901 QNGNLFIADTNNNIIRYLD 919
            + +LFIADTNN+ +R  D
Sbjct: 472 GD-SLFIADTNNHAVRIYD 489


>gi|332027687|gb|EGI67755.1| NHL repeat-containing protein 2 [Acromyrmex echinatior]
          Length = 686

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 254/681 (37%), Positives = 352/681 (51%), Gaps = 58/681 (8%)

Query: 407  QSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCC 465
            Q E+    + +I   EN   T    +FP  L+W N T  L   + LKGK+V+LDF+TYCC
Sbjct: 26   QREKEILILKHIRRFENSGATH---DFPKGLEWFNVTEGLSLGQHLKGKIVLLDFFTYCC 82

Query: 466  INCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGD 524
            INCMHVL +LE +EKK   +    V+GVHSAKF NE+  + + +AV RY I+HPVVND  
Sbjct: 83   INCMHVLAELEEVEKKISVEDGLVVIGVHSAKFTNERSSKNVLSAVQRYNITHPVVNDVT 142

Query: 525  MNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP 584
            + +W ++G+  WP+  ++GPNG+ LA   GE H+ ++    + A+ ++   K + N  LP
Sbjct: 143  LRMWHDMGITCWPSLIMLGPNGQPLAVFVGENHKDEILLYTKIAIAYFKSLKQMSNHGLP 202

Query: 585  LSLEKDNDPRLFTSPLKFPGKLAIDILNN--RLFISDSNHNRIVVTDLDGNFIVQIGSSG 642
            L       P      L FPGKL +  L    +L ISDS +NRIV+T+  G     IG   
Sbjct: 203  LKPAHHLLPS-SKDGLLFPGKLTVLQLEQETKLVISDSGNNRIVITNEHGRVEHVIGGCN 261

Query: 643  EEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGS 702
             +G +DG F +A FN PQG+      N++YVAD  NHA+R+ID     V T+AG G++G 
Sbjct: 262  -QGFKDGDFKNARFNSPQGVC--VLNNIIYVADNNNHAIRKIDLAKRIVSTIAGTGSQGC 318

Query: 703  DYQGGEKGTSQLLNSPWDVCYKPINEK------VYIAMAGQHQIW-----------EHST 745
            D +GG+ GT Q L+SPWDV       K      + IA+AG HQIW           E   
Sbjct: 319  DRKGGKHGTDQALSSPWDVAIYHHEYKGTMVPVLLIAIAGTHQIWALFLEDTIWWKEKKY 378

Query: 746  VDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
              G   A  G G E N N S       AQPSGI++  +    ++ADSESS+IR L+L +G
Sbjct: 379  TAGTCAAIVGSGREENRNNSYPHAAGLAQPSGIAIVQECKVAFLADSESSAIRRLHLDSG 438

Query: 806  GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLD 864
                + GGD   P NL  FGD DG G    LQHPLGV +   + +IYV D+YNHKIK +D
Sbjct: 439  QVSAVCGGDK-NPANLHSFGDVDGKGHLAKLQHPLGVTWNHLDKRIYVTDTYNHKIKSID 497

Query: 865  PASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKE 923
              +    TL G  K             +EP+G+  + +GN L+IADTNN+ ++ +DL  E
Sbjct: 498  LTTEYCKTLFGDKKPDH------TFTFNEPSGLAVSPDGNILYIADTNNHALKIIDLKNE 551

Query: 924  EPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHF 983
              ++ T+ +          R   R          T+ V GG   E NI   I    +   
Sbjct: 552  --KISTMAI-------VSRRDSNRNTDNVFTFDTTVNVRGG---ELNISFNIIFTNDLKL 599

Query: 984  SKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVL---HFRRMSPSVSTGRISCKVYYCK 1040
            + +A  ++ V + P N      L G LS   S  L     R   P V+   ++C V  C 
Sbjct: 600  NADAPQEWQVFL-PVNTWTAKSLTGRLSTPISVKLPEEETRNQLP-VTLNIMACTVDTC- 656

Query: 1041 EDEVCLYKPLLFEVPFQEEVP 1061
               V L   +LF V  + + P
Sbjct: 657  ---VPLKLSVLFNVQRKTDAP 674


>gi|321469552|gb|EFX80532.1| hypothetical protein DAPPUDRAFT_304106 [Daphnia pulex]
          Length = 689

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/548 (42%), Positives = 314/548 (57%), Gaps = 59/548 (10%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAP-LQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLE 479
           +E   +  + PEF +  +W N    L    D K ++V++DF+TYCCINCMH+LPDL  LE
Sbjct: 1   MEEGSSRDVFPEFESGWEWFNVKQGLSVSSDFKDQLVIVDFFTYCCINCMHILPDLHALE 60

Query: 480 KKY--KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
           +KY        VVGVHSAKF+NEK    I  A+ RYGI+HPVVND D  LW++L +  WP
Sbjct: 61  EKYPSDQSGVVVVGVHSAKFENEKVSANIMAAIQRYGITHPVVNDSDAVLWKKLEITCWP 120

Query: 538 TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT 597
           T  ++GP+GK +  + GEGHR+ L   VE+AL FY  K  +   PLPL L   N   +F 
Sbjct: 121 TLLILGPDGKPVFVIIGEGHREVLFHYVESALSFY--KNRIAPRPLPLLL---NSLEVFQ 175

Query: 598 SPLKFPGKLAI--------DIL------NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE 643
           S L FPGK+ +         +L      +  + +SD+ H+RI++  L G   V IG    
Sbjct: 176 SHLLFPGKICMIKSKSIEDSVLECSKEDSTYMAVSDTGHHRILIISLQGEIKVTIGGP-T 234

Query: 644 EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            G  +G+F  A F  PQG+A+    + LYVADT NH++R IDF    V+T+AG G +G+D
Sbjct: 235 PGWNEGAFSTAKFRSPQGIAFLPPCH-LYVADTGNHSIRLIDFSTKQVKTVAGTGLQGTD 293

Query: 704 YQGGEKGTSQLLNSPWDVCY-----KPINEKVYIAMAGQHQIWEHSTVD----------- 747
            +GG  G  Q L SPWD+C        + + + IA AG HQIW  +  D           
Sbjct: 294 KEGGMPGIEQPLASPWDICLAHSSTSDVPDLLIIANAGTHQIWGLALQDLVWWKKIQVEA 353

Query: 748 GVTRAFSGDGYERNLNGSSSLNTSFAQPSGI------SLSPDFMEIYVADSESSSIRALN 801
           G     +G G E N N S      FAQPSG+      S S D++ +++ADSESSSIR +N
Sbjct: 354 GRCLRLAGSGAEENRNNSYPAKAGFAQPSGLCCAALQSPSTDYL-LFLADSESSSIRQVN 412

Query: 802 LKTGGSRLLAGG--DPIFPDNLFKFGDRDGMGS---EVLLQHPLGV-YCAKNGQIYVADS 855
           LK G  + L GG  DP+   +LF +GDRD   +    VLLQHPL V +   N  +YVADS
Sbjct: 413 LKDGSVKALVGGGKDPM---DLFSYGDRDNKDNPKGTVLLQHPLAVAWNTANQLLYVADS 469

Query: 856 YNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL-AAQLSEPAGII--EAQNGNLFIADTNN 912
           YNHKIK +DP +   ST  G GKAG  DG++    Q +EP G+   E   G L++ADTNN
Sbjct: 470 YNHKIKTVDPLTKLCSTYLGNGKAGLADGSSEDEIQFNEPGGLCIDEEGGGILYVADTNN 529

Query: 913 NIIRYLDL 920
           + IR ++L
Sbjct: 530 HCIRKVNL 537



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT- 655
           T  L+ P  +A +  N  L+++DS +++I   D           +G+ GL DGS +D   
Sbjct: 446 TVLLQHPLAVAWNTANQLLYVADSYNHKIKTVDPLTKLCSTYLGNGKAGLADGSSEDEIQ 505

Query: 656 FNRPQGLAYNAKKN-LLYVADTENHALREIDFVNDTVRTL 694
           FN P GL  + +   +LYVADT NH +R+++ V++ + TL
Sbjct: 506 FNEPGGLCIDEEGGGILYVADTNNHCIRKVNLVSNVIDTL 545


>gi|195030130|ref|XP_001987921.1| GH10881 [Drosophila grimshawi]
 gi|193903921|gb|EDW02788.1| GH10881 [Drosophila grimshawi]
          Length = 728

 Score =  371 bits (953), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 225/545 (41%), Positives = 311/545 (57%), Gaps = 48/545 (8%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVV 490
           EF   LDW N +       L GK+VVLDF+TYCCINCMHVLP+L  LE+++  +    VV
Sbjct: 58  EFDCDLDWFNVSRPLTLAGLHGKLVVLDFFTYCCINCMHVLPELRALEERFTVEKGLVVV 117

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF+NE+    I +A  RYGI HP+VND   +LW+ L +  WP+  V+ P+G  + 
Sbjct: 118 GVHSPKFENERTAANILSAAQRYGIKHPIVNDSKTSLWQALSIRCWPSLLVLSPSGLPML 177

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
            L GEGH + L D V AAL ++G+++ +DN+ LPL L  D  P    S L+FP K  I  
Sbjct: 178 LLMGEGHSEFLHDFVGAALTYFGRQQKIDNSSLPLQLSTDLQP---ASNLRFPAK--ISR 232

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            ++R  I+D+ +NR++V  + G    +IG   + GL DG    A FN PQG+A+   ++ 
Sbjct: 233 FSDRYAIADAGNNRVLVVTIAGIVEHKIGGL-DNGLVDGDLLTARFNNPQGVAF-LDEHT 290

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY------- 723
           L VADT+NHALR+I   N  V TLAG G +G++  GG+ G  Q L+SPWDV         
Sbjct: 291 LIVADTDNHALRQISLKNGIVETLAGTGYQGNERVGGKLGQLQPLSSPWDVAVFRTRDMD 350

Query: 724 ---------KPINEKVYIAMAGQHQIWEHSTVDGVT----RAFS--------GDGYERNL 762
                     P    V IAMAG HQIW +   +G+     R F         G+G E N 
Sbjct: 351 MSFHVDELNVPEKTIVLIAMAGTHQIWGYFP-EGIIWWKFRKFEPRCCVSLIGNGLEENR 409

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
           N S   N +FAQPSG++++ D++  +VADSESSSIR  ++  G    + GGD   P NLF
Sbjct: 410 NNSYPQNAAFAQPSGLAMTSDYL--FVADSESSSIRKASMVDGKVMPVVGGDR-NPLNLF 466

Query: 823 KFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
            FGD DG      LQHPLGV +   + ++YVAD+YNHKIK +D  +N +STL        
Sbjct: 467 AFGDEDGKLYNAKLQHPLGVAFNHIDRKLYVADTYNHKIKVIDIDTNIISTLV------I 520

Query: 882 KDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTP 940
           K+       L EP+G+ ++A    L +ADTNN+ I  +DL   +     L+ K +   T 
Sbjct: 521 KNQDDSILTLREPSGLCVDASGHQLLVADTNNHSIHIIDLTTNKARRFLLDFKQIPSSTS 580

Query: 941 KSRSP 945
           ++ +P
Sbjct: 581 ETDAP 585


>gi|196009344|ref|XP_002114537.1| hypothetical protein TRIADDRAFT_11855 [Trichoplax adhaerens]
 gi|190582599|gb|EDV22671.1| hypothetical protein TRIADDRAFT_11855 [Trichoplax adhaerens]
          Length = 507

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 216/513 (42%), Positives = 297/513 (57%), Gaps = 32/513 (6%)

Query: 432 EFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTV 489
           +FPA L+WLN    L F  +L GK+ VLD +TYCCINCMHV+PDL+ L  K+  +    +
Sbjct: 1   DFPANLEWLNCENQLSFENELNGKLCVLDIFTYCCINCMHVMPDLKHLHSKFSIEDGVMI 60

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKFD+EK    +  ++LR+ + HPVVND    ++  L +  WPTF ++GP G+ L
Sbjct: 61  IGVHSAKFDDEKSTANVIQSILRHELDHPVVNDERGIIYDSLDIQCWPTFVILGPQGQFL 120

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
             L GEG R+ L  LV   L +Y    LL +  +PLSLE+    ++    L FPGK+ + 
Sbjct: 121 HVLHGEGKREMLMWLVRLGLRYYDSLGLLSHHSIPLSLERH---KIKPMTLSFPGKVCVV 177

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG--EEGLRDGSFDDATFNRPQGLAYNAK 667
              + + ISDS H+RI++   DG     +G+    EEG  DG F  A FN PQG+  +  
Sbjct: 178 NDGDDIVISDSGHHRILIVGKDGITRSCVGNKEYFEEGFVDGVFQKARFNNPQGITCSRN 237

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
              ++VADT NHA+R+ID     V T+AG G +G+D  GG  G  Q LNSPWD+   P  
Sbjct: 238 GKTIFVADTNNHAIRKIDLEYCEVTTIAGTGNQGNDLVGGGAGKMQALNSPWDLTLGPSC 297

Query: 728 EK----VYIAMAGQHQIWEHSTVD-----------GVTRAFSGDGYERNLNGSSSLNTSF 772
           E     +YIAMAG HQIW  +  D           G   AF G G E N N        F
Sbjct: 298 EDQEVVLYIAMAGSHQIWALALEDCVWFNNRSLRRGCCLAFCGSGDEENRNNYYPHKAGF 357

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
           AQPSGI  +     +YVADSESS+IR +++KTG  + L GG  + P +LF FGD DG+G 
Sbjct: 358 AQPSGIVSTNS--SLYVADSESSTIRMIDIKTGSVKGLVGGG-LDPKDLFSFGDVDGIGM 414

Query: 833 EVLLQHPLGV---YCAKNGQIYVADSYNHKIKKLDPASNRVSTLA-GIGKAGFKDGAALA 888
              LQHP+G+    C+K+  + +ADSYNHKIK ++P     +TL  G    G  D     
Sbjct: 415 SAKLQHPIGIAWRACSKD--VIIADSYNHKIKIINPTKRTSTTLIDGNCGPGMNDKIVPD 472

Query: 889 AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
            +L EP+G+  + +GN L+IA+TN ++I  ++L
Sbjct: 473 VKLREPSGLHLSPDGNSLYIANTNAHVITMINL 505



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 6/170 (3%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           GS  EE   +     A F +P G+   +  + LYVAD+E+  +R ID    +V+ L G G
Sbjct: 340 GSGDEENRNNYYPHKAGFAQPSGIV--STNSSLYVADSESSTIRMIDIKTGSVKGLVGGG 397

Query: 699 TKGSD-YQGGEK---GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS 754
               D +  G+    G S  L  P  + ++  ++ V IA +  H+I   +     +    
Sbjct: 398 LDPKDLFSFGDVDGIGMSAKLQHPIGIAWRACSKDVIIADSYNHKIKIINPTKRTSTTLI 457

Query: 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
                  +N     +    +PSG+ LSPD   +Y+A++ +  I  +NL+T
Sbjct: 458 DGNCGPGMNDKIVPDVKLREPSGLHLSPDGNSLYIANTNAHVITMINLQT 507


>gi|389844275|ref|YP_006346355.1| NHL repeat protein [Mesotoga prima MesG1.Ag.4.2]
 gi|387859021|gb|AFK07112.1| NHL repeat protein [Mesotoga prima MesG1.Ag.4.2]
          Length = 496

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 215/495 (43%), Positives = 295/495 (59%), Gaps = 28/495 (5%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           EFP    W+N        DLKG VV+LDFWTYCCINC+HV+PDL++LEKKY+D PF V+G
Sbjct: 7   EFPESSKWINVERPLTLADLKGYVVLLDFWTYCCINCIHVIPDLKWLEKKYEDSPFVVIG 66

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           VHSAKF+NE D   IR AV RY I HPVV D D  LW    + +WP++ ++GP+GK+L++
Sbjct: 67  VHSAKFENEHDERNIRAAVQRYEIQHPVVIDNDYFLWERYVIRAWPSYVLIGPDGKILSK 126

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDIL 611
           ++GEG R+ L   +  AL    +K +L    +P+ LE         S L FPGK+A    
Sbjct: 127 ISGEGKREYLSHEISKALEEGKRKGVLSEKRIPVKLELTKSE----SNLSFPGKIAFGDG 182

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIV----QIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
            N LFISD+N++RI++T+L   F+     QIG SG  GL DG F++A  N+PQG+ Y+  
Sbjct: 183 EN-LFISDTNNDRILLTELSTPFVAKTIDQIG-SGLSGLEDGPFENARLNKPQGIVYSNG 240

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +  LYVADTENHALR  D     + TL+G+G + +D+      +   LNSPWD+  +   
Sbjct: 241 R--LYVADTENHALRIADMNQRCLSTLSGDGFQDNDWNYNGDASKARLNSPWDL--QTDG 296

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
             +YIAMAG HQIW     +    AF+G G E N+      + +FAQPSG+ L  D   +
Sbjct: 297 RFLYIAMAGMHQIWRLDLENNTISAFAGSGVE-NIGDGHLKDANFAQPSGLFL--DRNSL 353

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           YVADSE S+IR ++L+ G  + +AG        LF FG  DG+    L QHP+G++  + 
Sbjct: 354 YVADSEVSAIRFVDLEAGTVQTVAGS------GLFSFGYVDGILKRSLFQHPIGIH-GEG 406

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAG---IGKAGFKDGAALAAQLSEPAGIIEAQNGN 904
             +YVAD+YNH I+K+D    RV T+      G          +  L EP   ++   G 
Sbjct: 407 RFLYVADTYNHAIRKIDLGIRRVETVIKNLREGTCTLNGDKCSSLGLFEPND-VKFHKGL 465

Query: 905 LFIADTNNNIIRYLD 919
           L+IADTNN++IR  D
Sbjct: 466 LYIADTNNHLIRVFD 480



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 39/276 (14%)

Query: 659 PQGLAYNAKKNLLYVADTENHA--LREID--FVNDTVRTLAGNGTKGSDYQGGEKG--TS 712
           P  +A+   +NL +++DT N    L E+   FV  T+  +      GS   G E G   +
Sbjct: 174 PGKIAFGDGENL-FISDTNNDRILLTELSTPFVAKTIDQI------GSGLSGLEDGPFEN 226

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN---LNGSSS-- 767
             LN P  + Y   N ++Y+A    H +             SGDG++ N    NG +S  
Sbjct: 227 ARLNKPQGIVYS--NGRLYVADTENHALRIADMNQRCLSTLSGDGFQDNDWNYNGDASKA 284

Query: 768 -LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+ +       L  D   +Y+A +    I  L+L+       AG      +N+     
Sbjct: 285 RLNSPW------DLQTDGRFLYIAMAGMHQIWRLDLENNTISAFAGSGV---ENI----- 330

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDG 884
            DG   +     P G++  +N  +YVADS    I+ +D  +  V T+AG G    G+ DG
Sbjct: 331 GDGHLKDANFAQPSGLFLDRN-SLYVADSEVSAIRFVDLEAGTVQTVAGSGLFSFGYVDG 389

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
               +    P GI   +   L++ADT N+ IR +DL
Sbjct: 390 ILKRSLFQHPIGI-HGEGRFLYVADTYNHAIRKIDL 424



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLD---PASNRVSTLAGIGKAGFKDGAALA 888
           SE  L  P  +       ++++D+ N +I   +   P   +     G G +G +DG    
Sbjct: 167 SESNLSFPGKIAFGDGENLFISDTNNDRILLTELSTPFVAKTIDQIGSGLSGLEDGPFEN 226

Query: 889 AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRL 948
           A+L++P GI+ + NG L++ADT N+ +R  D+N+    L TL   G Q            
Sbjct: 227 ARLNKPQGIVYS-NGRLYVADTENHALRIADMNQR--CLSTLSGDGFQDNDWNYNGDASK 283

Query: 949 RRRSSP-DAQT 958
            R +SP D QT
Sbjct: 284 ARLNSPWDLQT 294


>gi|345482264|ref|XP_001607897.2| PREDICTED: NHL repeat-containing protein 2-like [Nasonia
           vitripennis]
          Length = 768

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 218/514 (42%), Positives = 300/514 (58%), Gaps = 35/514 (6%)

Query: 430 VPEFPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-F 487
           V +F   L+W N +  L   + L GK+VVLDF+TYCCINCMH+LPDLE LEK++      
Sbjct: 128 VNDFAKGLEWFNVSESLSMYKHLAGKIVVLDFFTYCCINCMHILPDLEALEKRFTIQDGL 187

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            VVGVHSAKF NE+D   I +AV RY I HPVVND  +++WR++G+  WP+  V+GP G+
Sbjct: 188 VVVGVHSAKFANERDSSKILSAVQRYNIGHPVVNDAKLSMWRDIGIVCWPSLVVLGPKGQ 247

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
            L  L GEGHR+DL    + AL ++   K + N  +PL L +   P +    L FPGK+ 
Sbjct: 248 PLFVLLGEGHREDLFLYTKIALKYFKSLKQISNDSIPLKLAQHILP-MNKGSLLFPGKIH 306

Query: 608 IDILN--NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
               +   +L +SD+ +NRI++   DG     +G     G +DG F+ A FN PQG+   
Sbjct: 307 SFKTDAGEKLVVSDTGNNRILIMGKDGKVEHVVGGYS-PGFKDGDFETARFNAPQGVC-- 363

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
             K+ ++VAD ENHA+R+I+    TV ++AG G++G DY GG+ G  Q L+SPWDV    
Sbjct: 364 VLKDDVFVADNENHAIRKINLKTKTVISIAGTGSQGRDYTGGKIGKEQELSSPWDVAIYQ 423

Query: 726 INEK------VYIAMAGQHQIWEHSTVD-----------GVTRAFSGDGYERNLNGSSSL 768
             +K      + IA+AG HQIW     D           G      G+G E N N +   
Sbjct: 424 HEQKGETVPVLLIAIAGSHQIWALFLEDTIWWKNKQCKAGTCCNIVGNGKEANRNNTYPH 483

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
             S AQPSG+++S +   ++ ADSESS++R + L  G    + G D   P NL  FGD+D
Sbjct: 484 AASLAQPSGLAVSQELKSVFFADSESSTVRRVCLDDGKVFAVCGADND-PSNLHCFGDQD 542

Query: 829 GMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
           G      LQHPLGV   K  Q +Y+AD+YNHKIKK D   N V T+ G GK       + 
Sbjct: 543 GKKYSAKLQHPLGVAWNKFDQMVYIADTYNHKIKKTDSEGNCV-TVCGEGK------PSK 595

Query: 888 AAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
            +  +EP+G+  +QNG+ L+IADTNN+ I+ LDL
Sbjct: 596 NSIFNEPSGLAVSQNGDILYIADTNNHSIKTLDL 629



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 15/172 (8%)

Query: 638 IGSSGEEGLRDGSF-DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG 696
           I  +G+E  R+ ++   A+  +P GLA + +   ++ AD+E+  +R +   +  V  + G
Sbjct: 468 IVGNGKEANRNNTYPHAASLAQPSGLAVSQELKSVFFADSESSTVRRVCLDDGKVFAVCG 527

Query: 697 NGTKGSDY-----QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR 751
                S+      Q G+K +++L   P  V +   ++ VYIA    H+I + +  +G   
Sbjct: 528 ADNDPSNLHCFGDQDGKKYSAKL-QHPLGVAWNKFDQMVYIADTYNHKI-KKTDSEGNCV 585

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
              G+G         S N+ F +PSG+++S +   +Y+AD+ + SI+ L+LK
Sbjct: 586 TVCGEG-------KPSKNSIFNEPSGLAVSQNGDILYIADTNNHSIKTLDLK 630


>gi|195456364|ref|XP_002075106.1| GK23381 [Drosophila willistoni]
 gi|194171191|gb|EDW86092.1| GK23381 [Drosophila willistoni]
          Length = 721

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 222/540 (41%), Positives = 305/540 (56%), Gaps = 46/540 (8%)

Query: 412 QQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHV 471
           +++ N   D+   K      +F A LDW N       R L GK+V+LDF+TYCCINC+HV
Sbjct: 42  ERWTNSKHDISIAKLKSFKFDFAADLDWFNVTQALSLRQLNGKIVLLDFFTYCCINCIHV 101

Query: 472 LPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530
           LPDL  LE ++  +    +VGVHS KF NE+  + I +A  RYGI+HP+VND    LW  
Sbjct: 102 LPDLYALENRFPIENGLVIVGVHSPKFANERIADNILSAAQRYGITHPIVNDSHSELWHA 161

Query: 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKD 590
           LG+  WP+  ++ P+G  +  L GEGH   L + ++AAL ++G+   ++N  LPL L   
Sbjct: 162 LGIRCWPSILLLSPDGVPMLLLMGEGHGSFLQEFIDAALSYFGRLNTIENFSLPLKLSTH 221

Query: 591 NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
             P    S L+FP K+A   L +R  I+D+ +NR++V   DG    +IG   E G  DG 
Sbjct: 222 MQP---ASNLRFPAKIARSQLGHRYAIADAGNNRVLVVLNDGVVEHKIGGF-ESGFIDGD 277

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
              + FN PQG+A+   ++ L VADT+NHALR+I      V TLAG G + S+  GG  G
Sbjct: 278 LTTSRFNNPQGIAF-LDEDTLIVADTKNHALRQISLQGGIVETLAGTGHQCSERTGGRTG 336

Query: 711 TSQLLNSPWDVCY--------------KPINEK--VYIAMAGQHQIWEHSTVDGVT---- 750
             Q ++SPWDV                + + EK  + I+MAG HQIW +   +G+     
Sbjct: 337 PVQSMSSPWDVAIFRTPDMDMSFHLDERNVLEKTIILISMAGTHQIWGYFP-EGIIWWKF 395

Query: 751 RAFS--------GDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
           R F         G+G E N N S   N +FAQPSGI+++ DF+  ++ADSESSSIR  ++
Sbjct: 396 RKFEPRCCVSLIGNGLEENRNNSYPQNAAFAQPSGIAMAEDFL--FIADSESSSIRKASM 453

Query: 803 KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIK 861
             G    + GGD   P NLF FGD DG      LQHPLGV Y   + ++YVAD+YNHKIK
Sbjct: 454 LDGKVMPVVGGDR-NPLNLFAFGDLDGKLFNAKLQHPLGVAYNHVDDKVYVADTYNHKIK 512

Query: 862 KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
            +DP +N +STL+   K G            EPA I  + +GN L +ADTNN+ I  +DL
Sbjct: 513 VIDPKTNSISTLSIKNKEGN------PISFKEPASICISADGNQLLVADTNNHTIVEVDL 566



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 17/177 (9%)

Query: 638 IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG- 696
           IG+  EE   +    +A F +P G+A    ++ L++AD+E+ ++R+   ++  V  + G 
Sbjct: 407 IGNGLEENRNNSYPQNAAFAQPSGIA--MAEDFLFIADSESSSIRKASMLDGKVMPVVGG 464

Query: 697 -----NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR 751
                N     D  G  K  +  L  P  V Y  +++KVY+A    H+I     +D  T 
Sbjct: 465 DRNPLNLFAFGDLDG--KLFNAKLQHPLGVAYNHVDDKVYVADTYNHKI---KVIDPKTN 519

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           + S     +N  G+     SF +P+ I +S D  ++ VAD+ + +I  ++LKT  S+
Sbjct: 520 SISTLSI-KNKEGNP---ISFKEPASICISADGNQLLVADTNNHTIVEVDLKTLSSQ 572


>gi|427796943|gb|JAA63923.1| Putative tlpa-like family, partial [Rhipicephalus pulchellus]
          Length = 719

 Score =  365 bits (937), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 217/522 (41%), Positives = 312/522 (59%), Gaps = 35/522 (6%)

Query: 416 NYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL 475
           +YI+++ +     IV +    L+W+NT+      DL+G+VVVLDF+T+CCINC HVLP +
Sbjct: 70  SYIAEMSSSDDPFIVTDLGTDLEWINTSRPLVSSDLRGRVVVLDFFTFCCINCQHVLPTV 129

Query: 476 EFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVN 534
           + LE+++       VVGVHSAKFD+EK L+ +  A++R GI+HPVVND    LW+ L VN
Sbjct: 130 KLLEQEFPVQSGLLVVGVHSAKFDHEKQLDNVSKALMRLGITHPVVNDAHSFLWKRLRVN 189

Query: 535 SWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPR 594
            WPT  V+GP+G+ L  L GEG  + L      AL  +        T LPL+        
Sbjct: 190 CWPTLVVLGPSGQALLFLVGEGATQLLLPFCRVALEQFHPSP---TTTLPLT-----PGA 241

Query: 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDA 654
           L T PL FP K+    +  RL I+D+ H+RIV+T+  G  ++Q+    E G +DG  + A
Sbjct: 242 LPTGPLCFPAKVFATEM--RLIIADTGHHRIVITNHSGE-VLQVVGGYEPGYQDGPLNGA 298

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
            F+ P G+ +    + + VADT NHA+RE+D  N TV TLAG G +G D +GG  G  Q 
Sbjct: 299 LFSEPNGVQWR-DPHFILVADTGNHAIREVDLENGTVSTLAGTGKQGEDTEGGRLGQQQE 357

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLN 763
           LNSPWD+C   ++  ++IAMAG HQIW           + +   G     +G G E N N
Sbjct: 358 LNSPWDICL--VDNVLFIAMAGSHQIWAYFFRDEVLFGKQTYTKGTCACIAGSGAEGNRN 415

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
               L  +FAQPSG+   P    +++ADSESSSIR+L+LK G  R + GG  + P +LF 
Sbjct: 416 NRYPLRATFAQPSGLCFQPP-SSLHIADSESSSIRSLSLKDGTVRNVVGGG-LDPTDLFC 473

Query: 824 FGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
           FGD DG+     LQHPLGV +    G++YVADSYNHK+K++D      +TL  +G A  +
Sbjct: 474 FGDTDGVALNAKLQHPLGVAWSTVKGRLYVADSYNHKVKEVDVEKRLCNTL--LGGASVE 531

Query: 883 DGAAL---AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           D + +   +A+LSEP G+   ++  +++ADTNN+ ++ +DL+
Sbjct: 532 DLSGVHSQSARLSEPGGLCIFES-KMYVADTNNHCVKVVDLD 572


>gi|307182571|gb|EFN69764.1| NHL repeat-containing protein 2 [Camponotus floridanus]
          Length = 687

 Score =  362 bits (930), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 209/518 (40%), Positives = 297/518 (57%), Gaps = 34/518 (6%)

Query: 430 VPEFPAKLDWLNTAP-LQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPF 487
           + +FP  L+W N +  L   + LKGK+V+LDF+TYCCINCMHVL +LE +EKK   +   
Sbjct: 48  IEDFPKSLEWFNVSEGLSLVQHLKGKIVLLDFFTYCCINCMHVLAELEEIEKKISIEDGL 107

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            V+G+HSAKF NE+  + + +A+ RY I+HPVVND  + +W  +G+  WP+  ++GPNG+
Sbjct: 108 VVIGIHSAKFTNERSSKNVLSAIQRYNITHPVVNDVTLRMWNNMGIICWPSLVMLGPNGQ 167

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
            LA   GE H+ ++       + ++     + N  LPL     +    F + L FPGKLA
Sbjct: 168 PLAVFVGEDHKNEILLYARVMIAYFKSLNQISNHSLPLR-PAYHLLSSFKNGLLFPGKLA 226

Query: 608 I--DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
           I       +L ISDS +NRIV+    G     IG    +G +DGSF +A FN PQG+   
Sbjct: 227 ILSSEHGTKLIISDSGNNRIVIATKHGEVEHFIGGCN-QGFKDGSFKNARFNSPQGVC-- 283

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC--- 722
              N +YVAD  NHA+R+I+   + V T+AG G++G D++GG++G +Q+L+SPWDV    
Sbjct: 284 VLNNTIYVADNNNHAIRKINLTENNVSTIAGTGSQGYDHKGGKQGINQVLSSPWDVAIYH 343

Query: 723 --YK-PINEKVYIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSL 768
             YK  I   + IA+AG HQIW           E     G   A  G G E N N S   
Sbjct: 344 HEYKDSIVPVLLIAIAGTHQIWALFLEDTIWWKEKKYTAGTCAAIVGSGREENRNNSYPH 403

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
               AQPSGI+++ ++   + ADSESS+IR ++L  G    + GGD   P NL  FGD D
Sbjct: 404 TAGLAQPSGIAVAQEYKIAFFADSESSAIRRVHLDNGRVSAVCGGDK-NPTNLHAFGDID 462

Query: 829 GMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
           G      LQHPLG+ +   N QIY+AD+YNHKIK +D  +    TL G GK         
Sbjct: 463 GKEYLAKLQHPLGIAWDHLNKQIYIADTYNHKIKTVDTTTGYCKTLFGAGKPD------P 516

Query: 888 AAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE 924
               +EP+G+  + + N L++ADTNN+ ++ +DL  E+
Sbjct: 517 MFSFNEPSGLAISPDDNILYVADTNNHTLKIIDLKNEK 554



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 579 DNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI 638
           D  P  L    D D + + + L+ P  +A D LN +++I+D+ +++I   D    +   +
Sbjct: 449 DKNPTNLHAFGDIDGKEYLAKLQHPLGIAWDHLNKQIYIADTYNHKIKTVDTTTGYCKTL 508

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA 695
             +G+    D  F   +FN P GLA +   N+LYVADT NH L+ ID  N+ + T+ 
Sbjct: 509 FGAGKP---DPMF---SFNEPSGLAISPDDNILYVADTNNHTLKIIDLKNEKISTMV 559


>gi|307202136|gb|EFN81636.1| NHL repeat-containing protein 2 [Harpegnathos saltator]
          Length = 688

 Score =  362 bits (930), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 251/697 (36%), Positives = 354/697 (50%), Gaps = 85/697 (12%)

Query: 405  SSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAP-LQFRRDLKGKVVVLDFWTY 463
            S Q ++    + +I   E  K    +PEFP   +W N +  L F + LKGK+V+LDF+TY
Sbjct: 25   SEQKDKKAVVLKHIKRFE--KNEAHIPEFPKGSEWFNVSEGLSFTQHLKGKIVLLDFFTY 82

Query: 464  CCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
            CCINCMHVL +LE +EK++  +    V+GVHSAKF NE+D + + +AV RY I HPVVND
Sbjct: 83   CCINCMHVLAELEEIEKQFSIEDGLVVIGVHSAKFTNERDSKNVLSAVQRYNIRHPVVND 142

Query: 523  GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTP 582
              + +W ++G+  WP+  ++GPNG+ L  L GE H+ ++    +  L ++     + N  
Sbjct: 143  VTLRMWNDMGIICWPSLVILGPNGQPLVVLVGEDHKDEIVLYTKVMLAYFKSLNQISNHN 202

Query: 583  LP-------LSLEKDNDPRLFTSPLKFPGKLAIDILNN--RLFISDSNHNRIVVTDLDGN 633
            LP       LS  KD         L FPGKLAI       +L ISDS ++RI++T+  G 
Sbjct: 203  LPMKPAYHLLSSLKDG--------LLFPGKLAIFSSEQGVKLIISDSGNSRILITNQHGE 254

Query: 634  FIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRT 693
                IG +  +G  DG F  A FN PQG+      +++YVAD  NHA+R+I+    +V T
Sbjct: 255  IEHIIGGTN-QGFEDGDFKSAKFNSPQGVC--MLDDVIYVADNNNHAIRKINLSEKSVST 311

Query: 694  LAGNGTKGSDYQGGEKGTSQLLNSPWDVC-----YKPINEKV-YIAMAGQHQIW------ 741
            +AG G++  D  GG  GT+Q L+SPWDV      YK     V  IA+AG HQIW      
Sbjct: 312  IAGTGSQSHDRCGGRSGTNQDLSSPWDVAIYYHEYKNTTVPVLLIAIAGTHQIWALFLKD 371

Query: 742  -----EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796
                 E   + G   A  G G E N N S       AQPSGI +  +    ++ADSESS+
Sbjct: 372  TIWWKEKKYMAGTCAAIVGSGREENRNNSYPHTAGLAQPSGIVVVQESKVAFLADSESSA 431

Query: 797  IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADS 855
            IR L+L +G    + GGD   P NL  FGD DG      LQHPLG+ +     QIYVAD+
Sbjct: 432  IRCLHLDSGRVSAVCGGDK-NPANLHAFGDMDGKEYSAKLQHPLGIAWNHLEKQIYVADT 490

Query: 856  YNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNI 914
            YNHKIK +D A+    TL G  K             +EP+ +  + +GN L++ADTNN+ 
Sbjct: 491  YNHKIKSVDVATGYCRTLFGDRKPNS------MFSFNEPSDLAVSPDGNILYVADTNNHA 544

Query: 915  IRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEG---NI 971
            ++ ++L  +E     +             S +R   R+  +  T + D  +S  G   NI
Sbjct: 545  LKVINLKSKEISTMVI-------------SSRRDSNRNIDN--TFIFDTTISTRGGELNI 589

Query: 972  YLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLS-------PEGSAVLHFRRMS 1024
               I    E   + +A  +++V + P N    D L G L        PEG A   F    
Sbjct: 590  SFNIVFLNEMKLNMDAPQRWTVSL-PANTGTTDTLTGRLPTPVSIKFPEGEADNKF---- 644

Query: 1025 PSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVP 1061
             SV    I C    C    + +   ++F V    +VP
Sbjct: 645  -SVVLNIIGCTTDTC----LPMKLSVMFNVHRSADVP 676


>gi|428225769|ref|YP_007109866.1| NHL repeat containing protein [Geitlerinema sp. PCC 7407]
 gi|427985670|gb|AFY66814.1| NHL repeat containing protein [Geitlerinema sp. PCC 7407]
          Length = 498

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 208/515 (40%), Positives = 291/515 (56%), Gaps = 35/515 (6%)

Query: 430 VPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
            PE PA   WLN   PL  R  L+G+VV+LDFWTY CINC+HVLPDL  LE++Y D    
Sbjct: 6   APELPADFPWLNFPGPLSLR-SLRGRVVLLDFWTYGCINCLHVLPDLHALEQRYGDR-LQ 63

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+G+H+ KF  E+   ++  A+ RYGI HPVV D +  LW +  + +WPT  ++ P G +
Sbjct: 64  VIGIHTGKFSQEQHPASVEQAIARYGIRHPVVVDQNQYLWDQYAIKAWPTLVLIDPAGYV 123

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
           + Q AGEGH    D  +   L     +      P P         +   SPL FPGK+AI
Sbjct: 124 VTQRAGEGHSDTFDRQIGELL---AGRSPDSGAPAP--------EQPIASPLAFPGKVAI 172

Query: 609 DIL--NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA 666
             +   N LF++D+ H+R+V+  L+G     +G SG  G +DG ++ A F  PQGL Y+ 
Sbjct: 173 GAIAQENHLFVADTGHHRLVIATLEGKVRATVG-SGTPGYQDGPWETAQFRAPQGLTYDP 231

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY--QGGEKGTSQLLNSPWDVCYK 724
             + LYVADT NH +R +   + TV TLAG G +      Q G +     LNSPWDV  K
Sbjct: 232 AGDRLYVADTGNHLIRCVHGRSRTVTTLAGTGQQNRSLRPQQGRR-LETPLNSPWDVALK 290

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
              ++++IAMAG HQIW  S  +       G G E  ++G++S   +FAQPSG+++  D 
Sbjct: 291 --GDRLFIAMAGSHQIWVLSLTEDAVGTLLGTGAEACIDGTAS-EATFAQPSGLAIDGD- 346

Query: 785 MEIYVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
             +YVADSESSS+RA++L    S + L G        LF FGDR+G G    LQH LG+ 
Sbjct: 347 -TLYVADSESSSVRAISLADPPSVQTLCGS-----GGLFDFGDREGRGDRARLQHCLGL- 399

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
               G +++AD+YNHKIK+L+ A      + G G  G +DG    A  SEP+G + ++  
Sbjct: 400 AHGPGNLWIADTYNHKIKRLNLAEGHCVNIVGSGLPGHQDGWGPEASFSEPSG-LASEGQ 458

Query: 904 NLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP 938
            L+IADTNN+ IR  D   +  ++ T   +G+  P
Sbjct: 459 TLYIADTNNHAIRRWDWATQ--QVTTFCFEGLCAP 491


>gi|322788140|gb|EFZ13922.1| hypothetical protein SINV_02735 [Solenopsis invicta]
          Length = 717

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 246/694 (35%), Positives = 347/694 (50%), Gaps = 90/694 (12%)

Query: 432  EFPAKLDWLNTAP-LQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKK--------- 481
            +FP  L+W N +  L   + LKGK+V+LDF+TYCCINCMHVL +LE +EKK         
Sbjct: 50   DFPKGLEWFNVSEGLSLAQHLKGKIVLLDFFTYCCINCMHVLAELEEVEKKVSIEDGLVV 109

Query: 482  ------YKD---MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELG 532
                  YK+   +    +GVHSAKF NE+  + + +AV RY I HPVVND  + +W ++G
Sbjct: 110  VSMIFYYKNSQTLESMYIGVHSAKFTNERSSKNVLSAVQRYNIMHPVVNDVTLRMWHDMG 169

Query: 533  VNSWPTFAVV------------GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
            +  WP+  ++            GP+G+ LA   GE H+ ++    + A+  +     + +
Sbjct: 170  ITCWPSLIMLGMKQNLHLNLISGPSGQPLAVFVGEDHKDEILLYTKVAIAHFKSLNQISS 229

Query: 581  TPLPLSLEKDNDPRLFTSPLKFPGKLAI--DILNNRLFISDSNHNRIVVTDLDGNFIVQI 638
              LPL L     P      L FPGKL +       +L ISDS +NRIV+T+  G     I
Sbjct: 230  HSLPLKLAHHLLPS-SKDGLLFPGKLTVLQSEQGTKLVISDSGNNRIVITNEHGRVEHVI 288

Query: 639  GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
            G    +G +DG F +A FN PQG+   A  N +Y+AD  NHA+R+I+    TV T+AG G
Sbjct: 289  GGC-SQGFKDGDFKNARFNSPQGVC--ALNNTIYIADNNNHAIRKINLSEKTVSTIAGTG 345

Query: 699  TKGSDYQGGEKGTSQLLNSPWDVC-----YKPINEKV-YIAMAGQHQIW----------- 741
             +G D  GG  GT Q L+SPWDV      YK  +  V  IA+AG HQIW           
Sbjct: 346  LQGCDRNGGGHGTDQALSSPWDVAIYHHEYKGTSVPVLLIAIAGTHQIWALFLEDTVWWK 405

Query: 742  EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALN 801
            E     G   A  G G E N N S       AQPSGI++  +    + ADSESS+IR L+
Sbjct: 406  EKKYTAGTCAAIVGSGREENRNNSYPHAAGLAQPSGIAIVQECKAAFFADSESSAIRRLH 465

Query: 802  LKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKI 860
            L +G    + GGD   P NL  FGD DG G+ V LQHPLGV +   + QIYVAD+YNHKI
Sbjct: 466  LDSGQVSAVCGGDK-NPANLHSFGDVDGKGNSVKLQHPLGVTWNHSDKQIYVADTYNHKI 524

Query: 861  KKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLD 919
            K ++ A+    TL G GK    D   +    +EP+G+  + NGN L++ADTNN+ ++ +D
Sbjct: 525  KSVNTATGHCKTLFGGGKP---DNTFI---FNEPSGLAVSPNGNILYVADTNNHSLKIID 578

Query: 920  LNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSN----EGNIYLKI 975
            L  E  ++ T+ +                RR S+ +   +     + N    E N    I
Sbjct: 579  LKNE--KISTMSIA--------------FRRDSNRNIDNVFAFDTVVNTHGGELNASFNI 622

Query: 976  SLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCK 1035
                +   + +A  ++ V + P N      L G LS   S  L        +   R++  
Sbjct: 623  VFTNDLKLNADAPQEWQVSL-PANTWTAKSLTGKLSTPISVKLPEEEERNQL---RVTLN 678

Query: 1036 VYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEIT 1069
            +  C  D  C+  PL   + F  +     P  +T
Sbjct: 679  IMACTAD-TCV--PLKLSILFNVQRRTDAPTVVT 709


>gi|403364957|gb|EJY82253.1| Haloacid dehalogenase-like hydrolase domain-containing protein
           [Oxytricha trifallax]
          Length = 621

 Score =  356 bits (914), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 223/559 (39%), Positives = 317/559 (56%), Gaps = 63/559 (11%)

Query: 428 PIVPEFPAKLDWLNTAP---LQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           P VP+FP   +WLNT     L  +R+LK K+ V+DFW+ CCINC+HVL ++E LEK +KD
Sbjct: 59  PNVPDFPKGHEWLNTKDNKDLSLKRELKNKLTVVDFWSSCCINCIHVLAEMEHLEKTFKD 118

Query: 485 MP-FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
                 VG HSAKF+NEKDL  ++ AV+RY I HPV ND D   W+   VN WPT  V+G
Sbjct: 119 QKQIAFVGCHSAKFENEKDLYMLKQAVIRYDIQHPVFNDRDFIFWQSQDVNCWPTIIVIG 178

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTP-LPLSLEKDN----------- 591
           PN K++ ++ GE +++ L+  + AAL  Y ++  LD T  LP++LEKD            
Sbjct: 179 PNQKVILKVTGEDNQQTLEQFLYAALEHYDQQ--LDKTSDLPIALEKDKVQEQIDSKQTE 236

Query: 592 -----DPRLFTSPLKFPGKLAIDILNNR----------LFISDSNHNRIVVTDLDGNFIV 636
                  R     L  PGK+ I I++            + ++DS++NR +V D++    V
Sbjct: 237 GLREEQIRAVKQNLNNPGKV-IAIVDTEGLPYPDTTDIMVVADSSNNRYIVIDMNTWKCV 295

Query: 637 QIGSSGEEGLRDGSFDDATFNRPQGLAY--NAK-KNLLYVADTENHALREIDFVNDTVRT 693
            +  +G+ G +DG+F +A F+  QG+ +  N K ++ L   DT+NH +REI+    TV  
Sbjct: 296 DVIGNGKIGFKDGNFQEAEFHHTQGMCHFQNEKGEHCLMACDTKNHCIREINLHKKTVTK 355

Query: 694 LAG-NGTKGSDYQGGEK-GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR 751
           +AG    +G D  GG+K    Q++ SPWD+      + +Y   AG HQIW   T      
Sbjct: 356 VAGLPEVRGFDRDGGKKPANEQMIASPWDILNVGDGQFIY-CNAGTHQIWMLDTQKDKCY 414

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISL-----SPDFMEIYVADSESSSIRALNLKTGG 806
            +SG   E NLN S+  ++ +AQPSGI+L      P +   ++ADSESS IRA+NLKT  
Sbjct: 415 RYSGSAAEGNLN-STPADSQWAQPSGITLGLWNGEPHY---FIADSESSCIRAINLKTKQ 470

Query: 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDP 865
           +  + GGD  +  NLF FGD DG G +  LQHP+GV YC+ N Q+YVAD+YNHKIK +D 
Sbjct: 471 AIGIVGGDSNYR-NLFAFGDADGQGFKARLQHPIGVNYCSLNNQLYVADTYNHKIKVMDF 529

Query: 866 ASNR--VSTLAGIGKAGFKDGAALAAQ---LSEPAGIIEAQNG----NLFIADTNNNIIR 916
             N   +   + IG +  K+   +  +   L+EP G+     G     + IADT NN IR
Sbjct: 530 TKNSKTIPVTSWIGSSTEKNPRVVDGKQPILNEPNGLWTVVKGGDLKGILIADTGNNCIR 589

Query: 917 YLDLNKEEPELQTLELKGV 935
              L   + E+ TLELKG+
Sbjct: 590 MATL---DGEVTTLELKGI 605


>gi|195164496|ref|XP_002023083.1| GL21149 [Drosophila persimilis]
 gi|194105168|gb|EDW27211.1| GL21149 [Drosophila persimilis]
          Length = 595

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 221/548 (40%), Positives = 313/548 (57%), Gaps = 58/548 (10%)

Query: 397 SFEQTEGGSSQSERIQQFVNYI------SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRD 450
           ++  T G   + E+++  ++Y+      + +   K+T I  EF + LDW N +       
Sbjct: 23  TYRNTNG---EKEKVKVLIDYLERWDDDNSIAKLKSTNI--EFESDLDWFNVSQPLSLEG 77

Query: 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNA 509
           L+GKVVVLDF+TYCCINCMHVLP+L  LE+++  +    V+GVHS KF+NE+    I +A
Sbjct: 78  LRGKVVVLDFFTYCCINCMHVLPELHSLEERFPIESGLVVIGVHSPKFENERTTANILSA 137

Query: 510 VLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           V RYGI+HP+VND    LWR LGV  WP+  V+ P G  +  L GEGH   + + + AAL
Sbjct: 138 VDRYGITHPIVNDSRSALWRALGVRCWPSIMVLSPTGLPMLLLMGEGHGIFMQEFIGAAL 197

Query: 570 LFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTD 629
            F+ +++ ++   LP+ L     P   TS L+FP K+A   L  R  I+D+ +NR++V  
Sbjct: 198 SFFSRQEKINLGSLPMKLSSHLHP---TSSLRFPAKIARSSL-GRYAIADAGNNRVLVVS 253

Query: 630 LDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND 689
            DG    +IG   + G  DG    + FN PQG+A+   ++ L VADTENHALR+I   N+
Sbjct: 254 ADGVVEHKIGGL-QAGFVDGKLALSRFNSPQGVAF-LNESTLIVADTENHALRKISLENE 311

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY--------------KPINEK--VYIA 733
            V TLAG G +G++  GG  G  Q L+SPWD+                + + EK  + I+
Sbjct: 312 LVETLAGTGHQGNERIGGRVGPLQALSSPWDLAVFRTRDMDMSFHLDERNVPEKTIILIS 371

Query: 734 MAGQHQIWEHSTVDGVT----RAFS--------GDGYERNLNGSSSLNTSFAQPSGISLS 781
           MAG HQIW +   +G+     R F         G+G E N N S   N +FAQPSG+++S
Sbjct: 372 MAGTHQIWGYFP-EGIIWWKFRKFEPLCCVSLIGNGLEENRNNSYPQNAAFAQPSGLAMS 430

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
            DF+  ++ADSESSSIR  ++  G    + GGD   P NLF FGD DG      LQHPLG
Sbjct: 431 KDFL--FIADSESSSIRKASMIDGKVMPVVGGDR-NPLNLFAFGDVDGKLFNAKLQHPLG 487

Query: 842 V-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IE 899
           V +   + ++YVAD+YNHKIK +D  +N VSTLA       K         +EPAG+ ++
Sbjct: 488 VTHSDADNKVYVADTYNHKIKVIDTETNCVSTLA------IKSQGGTPLIFNEPAGLCLD 541

Query: 900 AQNGNLFI 907
           A+  NL +
Sbjct: 542 AEGRNLLV 549


>gi|391330742|ref|XP_003739813.1| PREDICTED: NHL repeat-containing protein 2-like [Metaseiulus
           occidentalis]
          Length = 685

 Score =  345 bits (886), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 198/545 (36%), Positives = 313/545 (57%), Gaps = 49/545 (8%)

Query: 405 SSQSERIQQFVN-YISDVENRKTTPIVPEFP---AKLDWLNTAPLQFRRDLKGKVVVLDF 460
           ++  E  Q+ ++ Y+ ++EN + T  +P      A ++WLN+  L F    +G++ +LDF
Sbjct: 24  TTDREAWQELISAYLEELENDQKTYPLPGADIDRAGVEWLNSEKLSFDEHFRGRLTILDF 83

Query: 461 WTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVV 520
           +TYCC+NCMH+LP L  LE +       V+GVHSAKF+NEK  + +R+A+LR+ I HPV+
Sbjct: 84  FTYCCVNCMHILPHLRDLETQLPVEDLIVIGVHSAKFENEKLSDNVRHAILRHDIRHPVL 143

Query: 521 NDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY----GKKK 576
           ND +M LW    +  WPT  ++GP G++L +  GE   K++D L+    +F      + +
Sbjct: 144 NDPEMKLWEMCQIICWPTLMLMGPAGEVLYKFIGE---KNVDRLIPYVKIFVEYYKSRNR 200

Query: 577 LLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLF--ISDSNHNRIVVTDLDGNF 634
           + ++TPLPL L +        + L+ PGK+A+D   +  +  +SDS +NRI+V D   N 
Sbjct: 201 ITNSTPLPLRLMQGESS---LTQLRSPGKIALDYTGDTSYYVVSDSANNRILVFDRFSNE 257

Query: 635 IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           +  I  +GE G  DG++    F+ PQG+ +      ++VAD  NHA+R +DF    V T+
Sbjct: 258 VQLIVGTGEAGFLDGAYGICRFSSPQGVCF--YDGGIFVADAGNHAIRRVDFSTKCVSTV 315

Query: 695 AGNGTKGSDYQGGEKGTSQLLNSPWDVC-YKPINEKVYIAMAGQHQIWEHSTVD------ 747
            G G +G D  G   G  Q +++PWDV  Y+  +  + IAMAG HQIW ++T D      
Sbjct: 316 VGTGKQGVDLVGNLDGNVQEISTPWDVVLYR--HSVLIIAMAGSHQIWAYATEDNCRLFD 373

Query: 748 -------GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL 800
                  G     +G G E N N S  L   FAQPSG++L  +   +++ADSESSSIR +
Sbjct: 374 GKVVVEKGHCVCIAGSGREENRNTSYPLRAGFAQPSGLALDTNEKFLFIADSESSSIRVM 433

Query: 801 NLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHK 859
           ++++G  + + GGD + P NLF FGD+DG   +V LQHPLG+ + A+  ++ VAD+YN+K
Sbjct: 434 DMQSGAIKNICGGD-LDPTNLFAFGDQDGRALDVKLQHPLGLSWDAQTDKLIVADTYNNK 492

Query: 860 IKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYL 918
           +K +D      ST+              A    EP G+ +++    +++ADT  + I+ L
Sbjct: 493 LKIVDARLRTCSTIPD------------AEDFREPGGLAVDSTRRRVYVADTEKHRIKIL 540

Query: 919 DLNKE 923
           D++K+
Sbjct: 541 DMSKD 545


>gi|407792655|ref|ZP_11139692.1| NHL repeat containing protein [Idiomarina xiamenensis 10-D-4]
 gi|407217768|gb|EKE87600.1| NHL repeat containing protein [Idiomarina xiamenensis 10-D-4]
          Length = 510

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 208/502 (41%), Positives = 282/502 (56%), Gaps = 40/502 (7%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           +FPA   WLN +       LKGKVV+LDFWTY C+NCMHVLPDL  LE+++      V+ 
Sbjct: 39  DFPADAPWLNVSEKLSMEQLKGKVVLLDFWTYGCVNCMHVLPDLARLEEQFGH-ALAVIS 97

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           VHS KF+NEK+ E +R  V RY I H VVND D  LWR   VN+WPTF ++  NG+ + Q
Sbjct: 98  VHSPKFENEKNTERLRQIVARYEIKHAVVNDVDFKLWRAYQVNAWPTFVLIDTNGQYVGQ 157

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDIL 611
           L+GEG  + L    +A  L   +   +D  PLP++LE      L  S    PGK   +  
Sbjct: 158 LSGEGQYETLQ---QAIKLLLEEADDIDRKPLPIALET-----LPESRFAAPGKAVSN-- 207

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
            + + ++D+ H++IVVTD  G  + +IG +G     DGS   A+FN PQGLA+   +  L
Sbjct: 208 GDYIAVADTLHHQIVVTDKHGKTVQRIG-TGNAAFNDGSASAASFNSPQGLAF--AEQTL 264

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           YVADT NHALR ID  +  V T+AG G  G +Y    K T+  L SPWD+      + V 
Sbjct: 265 YVADTGNHALRAIDLSSWQVTTVAGTGQLGRNYNASGKATAVALRSPWDITM--YQDDVI 322

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           IAMAG HQIW +S         +G G E  L+G++    +F QPSG+++  D   +YVAD
Sbjct: 323 IAMAGTHQIWRYSPSQQRLSILAGSGREALLDGTAK-QAAFNQPSGLAVVGD--TLYVAD 379

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
           +E+S+IRA++L T   R + G        LF+FG +DG  +  LLQHPL V      Q+ 
Sbjct: 380 AEASAIRAIDLTTQKVRTVVG------QGLFEFGSKDGDFARALLQHPLAVAALTPDQLV 433

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAG--IIEAQNGN-LFIA 908
           VAD+YNH+++ LD  + +VSTL             L+  L EP G  II     N L IA
Sbjct: 434 VADTYNHQLRLLDLGTQQVSTL------------HLSDSLLEPGGVSIIRTNEQNQLLIA 481

Query: 909 DTNNNIIRYLDLNKEEPELQTL 930
           DT +  I     + +  +LQ L
Sbjct: 482 DTGHQRILIAKPSADGWQLQPL 503


>gi|357620506|gb|EHJ72671.1| hypothetical protein KGM_13091 [Danaus plexippus]
          Length = 747

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 235/607 (38%), Positives = 320/607 (52%), Gaps = 81/607 (13%)

Query: 399 EQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVV 457
           E     S+ ++R     N+I  V      P + +F   L+W+N + PL   +    KVVV
Sbjct: 18  EALASTSNATDRETLITNHIKKV--WAIVPPIEDFKKNLEWVNVSEPLSLSQHCSEKVVV 75

Query: 458 LDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIS 516
           LDFWTYCCINC HVLPDL+++E  YK D    V+GVH AKF NEK    +  AV RY I 
Sbjct: 76  LDFWTYCCINCYHVLPDLDYIENLYKNDSGLVVIGVHCAKFTNEKSSSNVLAAVQRYNIR 135

Query: 517 HPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKK 576
           HPVVND +  +W  LG+  WPT  ++GP  K +  L GEGHR +L   + +AL  +  + 
Sbjct: 136 HPVVNDAESVMWETLGIRCWPTLLILGPGNKPIFILTGEGHRAELCCYLGSALQHFATR- 194

Query: 577 LLDNTPLPLSLE-----KDNDPRLFTSPLKFPGKLAID-ILNNR-----LFISDSNHNRI 625
            L N+ LP+SL      KDND       L FP K+A++     R     L ISD+ H+R+
Sbjct: 195 -LSNSSLPVSLNSSVKAKDNDK------LYFPSKIALNPFYRGRGEEPFLAISDTGHHRV 247

Query: 626 VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
           ++TD  G  I+++      G +DG   DA FN PQGL +    ++L V DT NHALR + 
Sbjct: 248 LLTDCSG-IILRVVGGKTPGFKDGKLTDAQFNSPQGLCW-LSSSVLVVCDTNNHALRAVH 305

Query: 686 FVNDTVRTLAGNGTKG--SDYQGGEKGTSQLLNSPWDVCY----------KP-------- 725
               TV  LAG G +    D+ GG+    Q L+SPWDV            +P        
Sbjct: 306 LDEGTVEVLAGTGEQAVVGDF-GGKCLGLQALSSPWDVILYTTPDMDMSVRPSLPPPPPP 364

Query: 726 ---INEK-------VYIAMAGQHQIWE-----------HSTVDGVTRAFSGDGYERNLNG 764
              + +K       + IA AG HQIW             S  +G     +G G E   N 
Sbjct: 365 PPGVTDKKDEKRRVLLIACAGSHQIWALFLDNTIWWKYKSYSEGTCVCVAGSGAEAARNS 424

Query: 765 SSSLNTSFAQPSGISL-SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
           + + + +FAQPS ++L S    E+++ADSESSSIR L L TG    L GGD   P NLF 
Sbjct: 425 AYAASAAFAQPSALALRSGSSPEVFIADSESSSIRRLALSTGQVSTLCGGDR-NPLNLFA 483

Query: 824 FGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
           FGD D +G E  LQHP+ V Y   N  +YVAD+YNHKIKK+D    +VST+         
Sbjct: 484 FGDVDDVGVEAKLQHPMAVAYNEANKTLYVADTYNHKIKKVDVGPQKVSTINPTMIE--- 540

Query: 883 DGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPK 941
             +   A+ +EP+G+  + +G  L+IADTNN+ I+ L++ K   +    E K V+ P PK
Sbjct: 541 --STDPAKFNEPSGLSISSDGKYLYIADTNNHSIKILNVAKNVCQ----EFK-VRLPDPK 593

Query: 942 SRSPKRL 948
              P+ L
Sbjct: 594 FTEPENL 600


>gi|318059218|ref|ZP_07977941.1| hypothetical protein SSA3_14816 [Streptomyces sp. SA3_actG]
 gi|318079124|ref|ZP_07986456.1| hypothetical protein SSA3_21010 [Streptomyces sp. SA3_actF]
          Length = 610

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 184/455 (40%), Positives = 263/455 (57%), Gaps = 24/455 (5%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT    +   DL+G++V+LDFWT+CCINC+HVL +L  LE+K+
Sbjct: 9   RRARVRAPELVGKGGWLNTGGTSYSLADLRGRIVILDFWTFCCINCLHVLDELRELEEKH 68

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    ++GVHS KF +E +  A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+
Sbjct: 69  RDT-VVIIGVHSPKFVHEAEHAAVVDAVERYGVEHPVLDDPELATWKQYAVRAWPTLVVI 127

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   L  LV+     +G K  L     P        P    + L+F
Sbjct: 128 DPEGYVVAQHAGEGHAHALATLVDELEAEHGAKGTLRRGEGPYVA-----PEPVATDLRF 182

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK A+ +      +SD+  + +V  + DG  + +   SGE GLRDG    A FN PQGL
Sbjct: 183 PGK-ALRLPGGTFLVSDTTRHALVELEADGETVRRRIGSGERGLRDGDAAGARFNEPQGL 241

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPW 719
           A       + VADT NHALR +D  +  V TLAG G    +G    G  +  S  L+SPW
Sbjct: 242 AL-LPDGAVVVADTVNHALRRVDLASGEVSTLAGTGRQWWQGEPVAGPAREVS--LSSPW 298

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +   + KV+IAMAG HQ+W ++   G  RA +G   E  ++G +     FAQPSG++
Sbjct: 299 DVAW--FDGKVWIAMAGVHQLWTYAPEAGTVRAAAGTTNEGLVDGPAE-QAWFAQPSGLA 355

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S D   +++AD+E+S++R ++ + G  R   G        LF FG RDG   + LLQHP
Sbjct: 356 VSLDGERLWIADAETSAVRWID-REGTVRTAVG------TGLFDFGHRDGAAGQALLQHP 408

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           LGV    +G + VAD+YNH +++ DPAS  V+TLA
Sbjct: 409 LGVTALPDGSVAVADTYNHALRRYDPASEEVTTLA 443



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
            G   V+D+  H + +L+     V    G G+ G +DG A  A+ +EP G+    +G + 
Sbjct: 191 GGTFLVSDTTRHALVELEADGETVRRRIGSGERGLRDGDAAGARFNEPQGLALLPDGAVV 250

Query: 907 IADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           +ADT N+ +R +DL     E+ TL   G Q
Sbjct: 251 VADTVNHALRRVDLASG--EVSTLAGTGRQ 278



 Score = 47.8 bits (112), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD- 883
           G RDG  +      P G+    +G + VAD+ NH ++++D AS  VSTLAG G+  ++  
Sbjct: 224 GLRDGDAAGARFNEPQGLALLPDGAVVVADTVNHALRRVDLASGEVSTLAGTGRQWWQGE 283

Query: 884 ---GAALAAQLSEPAGIIEAQNGNLFIA 908
              G A    LS P  +    +G ++IA
Sbjct: 284 PVAGPAREVSLSSPWDVAWF-DGKVWIA 310


>gi|167041535|gb|ABZ06284.1| putative NHL repeat protein [uncultured marine microorganism
           HF4000_008B14]
          Length = 426

 Score =  333 bits (853), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 195/448 (43%), Positives = 268/448 (59%), Gaps = 24/448 (5%)

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVGVHSAKF NEK  + +  AV RY + HPVVND D  +W++    +WPT   + P GK+
Sbjct: 2   VVGVHSAKFPNEKIKDNLHKAVQRYELGHPVVNDVDFQVWQQYACRAWPTLMFIDPLGKV 61

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
           + +  GE   +  D L+   +  + +  +LD T  P++  KD  P    S L FPGK+  
Sbjct: 62  IGKHEGELSYEQFDTLISQMVSEFDEAGILDRT--PVTFVKDEAP---DSTLSFPGKVVA 116

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKK 668
           D  +NRLFI+DSNHNRI+VT LDG+ +  +G SGE G+ DGSF  A+F+ PQG+      
Sbjct: 117 DADSNRLFIADSNHNRIIVTTLDGDALKVVG-SGEPGMVDGSFAAASFDHPQGMVLVG-- 173

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728
           +LLYVAD ENHA+R++D   + V T+AG GT+GS  +G   G    LNSPWD+ +     
Sbjct: 174 DLLYVADAENHAIRKVDLAAEQVETIAGTGTQGSMREGTGPGLHTELNSPWDLAFH--EG 231

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            +YIAMAG HQ+W      G    ++G G E +L+     + + AQPSGI  + D   +Y
Sbjct: 232 SLYIAMAGLHQLWSMDLSSGTVGPYAGSGRE-SLDDGPLASATLAQPSGI--TSDGNRLY 288

Query: 789 VADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
            ADSE+S++R+ +L   G  R + G        LF+FGD DG    + LQHP+GV    +
Sbjct: 289 FADSETSAVRSADLDPHGMVRTIIG------LGLFEFGDVDGADHNIRLQHPIGV-AHHD 341

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
           G IY+AD+YNHKIKK+ P      T+ G G+ G +DG    AQ SEP+G +    G ++I
Sbjct: 342 GTIYLADTYNHKIKKVLPVMQSSFTMLGNGQPGDRDGPGNQAQFSEPSG-LSIDGGKIYI 400

Query: 908 ADTNNNIIRYLDLNKEEPELQTLELKGV 935
           ADTNN+ IR  DL  E  E+ TL+L GV
Sbjct: 401 ADTNNHAIRVADL--ESGEVVTLKLSGV 426


>gi|336313754|ref|ZP_08568676.1| thiol-disulfide isomerase-like thioredoxin [Rheinheimera sp. A13L]
 gi|335881693|gb|EGM79570.1| thiol-disulfide isomerase-like thioredoxin [Rheinheimera sp. A13L]
          Length = 498

 Score =  332 bits (851), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 208/510 (40%), Positives = 286/510 (56%), Gaps = 46/510 (9%)

Query: 432 EFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           EFP  L WLN T PL  ++ LKGKVV+LDFWTY C+NC+HV+PDL  LE+KY +    V+
Sbjct: 31  EFPVGLPWLNVTEPLTMQQ-LKGKVVLLDFWTYGCVNCIHVIPDLHKLEQKYGNQ-LAVI 88

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
            VHS KF+NEK L  + + V RYG+ H VVND +  LWR   V +WPTF ++GP+GK + 
Sbjct: 89  SVHSPKFENEKQLSTLTSIVRRYGMQHAVVNDVEFQLWRSYAVRAWPTFVLIGPDGKYVG 148

Query: 551 QLAGEGHRKDLDDLVEAALL-FYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           Q +GEG    LD  ++  L  F G+  L   TPLP+ L    DP    + L  PG + +D
Sbjct: 149 QTSGEGRYDVLDQAIKQLLAEFKGEPNL---TPLPIKLL---DP--LNTILAAPGAVTVD 200

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
                + ISD+ H++IV+ D  G  + ++GS   E L+DG  D + F+ PQGL    K  
Sbjct: 201 --ERYIAISDTLHHQIVLMDHQGKLVKRLGSGIAE-LKDGHSDSSAFSSPQGLVLTDKA- 256

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNG--TKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
            LYVADT NHA+R ID     V T+AGNG   +G    G        L SPWD+     N
Sbjct: 257 -LYVADTGNHAIRRIDLSTFQVNTIAGNGELAQGRLISGSTPAQVS-LRSPWDLALD--N 312

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
             +YIAMAG HQIW           F+G G E  L+G    + +F QPSG++L  +  ++
Sbjct: 313 NTLYIAMAGSHQIWTLDLKSSELNLFAGTGQEALLDGKRR-DAAFNQPSGLALRGN--KL 369

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +VAD+E+S++R ++L +G    L G        LF+FG +DG     LLQH   V     
Sbjct: 370 WVADAEASAVRQIDLSSGKVDTLVG------QGLFEFGLKDGGFKRALLQHNKDVVALDK 423

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             + VAD+YNHKI+ LD    +V TL            +L  +L+EP G +   N  L+I
Sbjct: 424 NTLAVADTYNHKIRLLDLDKQQVMTL------------SLGTELNEPGG-LAVFNDELYI 470

Query: 908 ADTNNNIIRYLDLNKEEPELQTLELKGVQP 937
           ADTNNN  R L  + ++ +L  L++   +P
Sbjct: 471 ADTNNN--RILRWHLKQQKLTELQVPASKP 498


>gi|302520584|ref|ZP_07272926.1| NHL repeat containing protein [Streptomyces sp. SPB78]
 gi|302429479|gb|EFL01295.1| NHL repeat containing protein [Streptomyces sp. SPB78]
          Length = 634

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 184/455 (40%), Positives = 263/455 (57%), Gaps = 24/455 (5%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT    +   DL+G++V+LDFWT+CCINC+HVL +L  LE+K+
Sbjct: 9   RRARVRAPELVGKGGWLNTGGTSYSLADLRGRIVILDFWTFCCINCLHVLDELRELEEKH 68

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    ++GVHS KF +E +  A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+
Sbjct: 69  RDT-VVIIGVHSPKFVHEAEHAAVVDAVERYGVEHPVLDDPELATWKQYAVRAWPTLVVI 127

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   L  LV+     +G K  L     P        P    + L+F
Sbjct: 128 DPEGYVVAQHAGEGHAHALATLVDELEAEHGAKGTLRRGEGPYVA-----PEPVATDLRF 182

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK A+ +      +SD+  + +V  + DG  + +   SGE GLRDG    A FN PQGL
Sbjct: 183 PGK-ALRLPGGTFLVSDTTRHALVELEADGETVRRRIGSGERGLRDGDAAGARFNEPQGL 241

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPW 719
           A       + VADT NHALR +D  +  V TLAG G    +G    G  +  S  L+SPW
Sbjct: 242 AL-LPDGAVVVADTVNHALRRVDPASGEVSTLAGTGRQWWQGEPVAGPAREVS--LSSPW 298

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +   + KV+IAMAG HQ+W ++   G  RA +G   E  ++G +     FAQPSG++
Sbjct: 299 DVAW--FDGKVWIAMAGVHQLWTYAPEAGTVRAAAGTTNEGLVDGPAE-QAWFAQPSGLA 355

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S D   +++AD+E+S++R ++ + G  R   G        LF FG RDG   + LLQHP
Sbjct: 356 VSLDGERLWIADAETSAVRWID-REGTVRTAVG------TGLFDFGHRDGAAGQALLQHP 408

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           LGV    +G + VAD+YNH +++ DPAS  V+TLA
Sbjct: 409 LGVTALPDGSVAVADTYNHALRRYDPASEEVTTLA 443



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD- 883
           G RDG  +      P G+    +G + VAD+ NH ++++DPAS  VSTLAG G+  ++  
Sbjct: 224 GLRDGDAAGARFNEPQGLALLPDGAVVVADTVNHALRRVDPASGEVSTLAGTGRQWWQGE 283

Query: 884 ---GAALAAQLSEPAGIIEAQNGNLFIA 908
              G A    LS P  +    +G ++IA
Sbjct: 284 PVAGPAREVSLSSPWDVAWF-DGKVWIA 310



 Score = 47.8 bits (112), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 39/73 (53%)

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
            G   V+D+  H + +L+     V    G G+ G +DG A  A+ +EP G+    +G + 
Sbjct: 191 GGTFLVSDTTRHALVELEADGETVRRRIGSGERGLRDGDAAGARFNEPQGLALLPDGAVV 250

Query: 907 IADTNNNIIRYLD 919
           +ADT N+ +R +D
Sbjct: 251 VADTVNHALRRVD 263


>gi|333025645|ref|ZP_08453709.1| hypothetical protein STTU_3149 [Streptomyces sp. Tu6071]
 gi|332745497|gb|EGJ75938.1| hypothetical protein STTU_3149 [Streptomyces sp. Tu6071]
          Length = 610

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 182/455 (40%), Positives = 261/455 (57%), Gaps = 24/455 (5%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT    +   DL+G++V+LDFWT+CCINC+HVL +L  LE+K+
Sbjct: 9   RRARVRAPELVGKGGWLNTGGTSYSLADLRGRIVILDFWTFCCINCLHVLDELRELEEKH 68

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    ++GVHS KF +E +  A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+
Sbjct: 69  RDT-VVIIGVHSPKFVHEAEHAAVVDAVERYGVEHPVLDDPELATWKQYAVRAWPTLVVI 127

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   L  LV+     +G K  L     P        P    + L+F
Sbjct: 128 DPEGYVVAQHAGEGHAHALATLVDELEAEHGAKGTLRRGEGPYVA-----PEPVATDLRF 182

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P K A+ +      +SD+  + +V  + DG  + +   SGE GL DG    A FN PQGL
Sbjct: 183 PAK-ALRLPGGTFLVSDTTRHALVELEADGETVRRRIGSGERGLLDGDATGARFNEPQGL 241

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPW 719
           A       + VADT NHALR +D  +  V TLAG G    +G    G  +  S  L+SPW
Sbjct: 242 AL-LPDGAVVVADTVNHALRRVDLASGEVSTLAGTGRQWWQGEPVAGPAREVS--LSSPW 298

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +   + KV+IAMAG HQ+W ++   G  RA +G   E  ++G +     FAQPSG++
Sbjct: 299 DVAW--FDGKVWIAMAGVHQLWTYAPEAGTVRAAAGTTNEGLVDGPAE-QAWFAQPSGLA 355

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S D   +++AD+E+S++R ++ + G  R   G        LF FG RDG   + LLQHP
Sbjct: 356 VSLDGERLWIADAETSAVRWID-REGTVRTAVG------TGLFDFGHRDGAAGQALLQHP 408

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           LGV    +G + VAD+YNH +++ DPAS  V+TLA
Sbjct: 409 LGVTALPDGSVAVADTYNHALRRYDPASEEVTTLA 443



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P        G   V+D+  H + +L+     V    G G+ G  DG A  A+ +EP 
Sbjct: 180 LRFPAKALRLPGGTFLVSDTTRHALVELEADGETVRRRIGSGERGLLDGDATGARFNEPQ 239

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           G+    +G + +ADT N+ +R +DL     E+ TL   G Q
Sbjct: 240 GLALLPDGAVVVADTVNHALRRVDLASG--EVSTLAGTGRQ 278



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD---- 883
           DG  +      P G+    +G + VAD+ NH ++++D AS  VSTLAG G+  ++     
Sbjct: 227 DGDATGARFNEPQGLALLPDGAVVVADTVNHALRRVDLASGEVSTLAGTGRQWWQGEPVA 286

Query: 884 GAALAAQLSEPAGIIEAQNGNLFIA 908
           G A    LS P  +    +G ++IA
Sbjct: 287 GPAREVSLSSPWDVAWF-DGKVWIA 310


>gi|182437571|ref|YP_001825290.1| hypothetical protein SGR_3778 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178466087|dbj|BAG20607.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 605

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 175/448 (39%), Positives = 263/448 (58%), Gaps = 24/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT   Q+   DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 10  PELIGKGGWLNTGDQQYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 69  IGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +G K  L     P        P    + L+FPGK A+ 
Sbjct: 129 AQHAGEGHAHAIEKLVEELEAEHGAKGTLRRGDGPYVA-----PEPVATHLRFPGK-ALL 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +  L +SD+  +R+V  D DG  + +   +GE GLRDG  D+A F+ PQGLA      
Sbjct: 183 LPDGGLLVSDTTRHRLVELDADGETVRRHFGTGERGLRDGGPDEARFSEPQGLAV-LPDG 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            + VADT NHA+R +D       TLAG G    +G+   G  +     L+SPWDV +   
Sbjct: 242 RVAVADTVNHAIRALDLTTGVTSTLAGTGRQWWQGTPTSGPAREVD--LSSPWDVAW--F 297

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            ++++IAMAG HQ+W +       RA +G   E  ++G ++    FAQPSG+++S D   
Sbjct: 298 GDRLWIAMAGVHQLWTYDPQSATVRAAAGTTNEGLVDGPAA-EAWFAQPSGLAVSADGER 356

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R ++        +  G       LF FG RDG   + LLQHP+GV    
Sbjct: 357 LWVADSETSALRWVDRDEHVHTAVGTG-------LFDFGHRDGAADQALLQHPIGVTALP 409

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + ++D+YNH +++ DPAS  V+TLA
Sbjct: 410 DGSVAISDTYNHALRRYDPASGEVTTLA 437



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 96/227 (42%), Gaps = 57/227 (25%)

Query: 747 DGVT-RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           DG T R   G G ER L         F++P G+++ PD   + VAD+ + +IRAL+L TG
Sbjct: 204 DGETVRRHFGTG-ERGLRDGGPDEARFSEPQGLAVLPDG-RVAVADTVNHAIRALDLTTG 261

Query: 806 GSRLLAG-------GDPIF----------PDNLFKFGDR--------------------- 827
            +  LAG       G P            P ++  FGDR                     
Sbjct: 262 VTSTLAGTGRQWWQGTPTSGPAREVDLSSPWDVAWFGDRLWIAMAGVHQLWTYDPQSATV 321

Query: 828 ------------DGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
                       DG  +E     P G+  + +G+ ++VADS    ++ +D     V T  
Sbjct: 322 RAAAGTTNEGLVDGPAAEAWFAQPSGLAVSADGERLWVADSETSALRWVD-RDEHVHTAV 380

Query: 875 GIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           G G    G +DGAA  A L  P G+    +G++ I+DT N+ +R  D
Sbjct: 381 GTGLFDFGHRDGAADQALLQHPIGVTALPDGSVAISDTYNHALRRYD 427



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 45/86 (52%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G + V+D+  H++ +LD     V    G G+ G +DG    A+ SEP 
Sbjct: 174 LRFPGKALLLPDGGLLVSDTTRHRLVELDADGETVRRHFGTGERGLRDGGPDEARFSEPQ 233

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLN 921
           G+    +G + +ADT N+ IR LDL 
Sbjct: 234 GLAVLPDGRVAVADTVNHAIRALDLT 259



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQG 661
           P  LA+     RL+++DS  + +   D D +    +G+   + G RDG+ D A    P G
Sbjct: 345 PSGLAVSADGERLWVADSETSALRWVDRDEHVHTAVGTGLFDFGHRDGAADQALLQHPIG 404

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           +      ++  ++DT NHALR  D  +  V TLA +  + SD
Sbjct: 405 VTALPDGSVA-ISDTYNHALRRYDPASGEVTTLATDVREPSD 445


>gi|326778226|ref|ZP_08237491.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Streptomyces griseus XylebKG-1]
 gi|326658559|gb|EGE43405.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Streptomyces griseus XylebKG-1]
          Length = 615

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 175/448 (39%), Positives = 263/448 (58%), Gaps = 24/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT   Q+   DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 20  PELIGKGGWLNTGDQQYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 78

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 79  IGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 138

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +G K  L     P        P    + L+FPGK A+ 
Sbjct: 139 AQHAGEGHAHAIEKLVEELEAEHGAKGTLRRGDGPYVA-----PEPVATHLRFPGK-ALL 192

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +  L +SD+  +R+V  D DG  + +   +GE GLRDG  D+A F+ PQGLA      
Sbjct: 193 LPDGGLLVSDTTRHRLVELDADGETVRRHFGTGERGLRDGGPDEARFSEPQGLAV-LPDG 251

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            + VADT NHA+R +D       TLAG G    +G+   G  +     L+SPWDV +   
Sbjct: 252 RVAVADTVNHAIRALDLTTGVTSTLAGTGRQWWQGTPTSGPAREVD--LSSPWDVAW--F 307

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            ++++IAMAG HQ+W +       RA +G   E  ++G ++    FAQPSG+++S D   
Sbjct: 308 GDRLWIAMAGVHQLWTYDPQSATVRAAAGTTNEGLVDGPAA-EAWFAQPSGLAVSADGER 366

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R ++        +  G       LF FG RDG   + LLQHP+GV    
Sbjct: 367 LWVADSETSALRWVDRDEHVHTAVGTG-------LFDFGHRDGAADQALLQHPIGVTALP 419

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + ++D+YNH +++ DPAS  V+TLA
Sbjct: 420 DGSVAISDTYNHALRRYDPASGEVTTLA 447



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 96/227 (42%), Gaps = 57/227 (25%)

Query: 747 DGVT-RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           DG T R   G G ER L         F++P G+++ PD   + VAD+ + +IRAL+L TG
Sbjct: 214 DGETVRRHFGTG-ERGLRDGGPDEARFSEPQGLAVLPDG-RVAVADTVNHAIRALDLTTG 271

Query: 806 GSRLLAG-------GDPIF----------PDNLFKFGDR--------------------- 827
            +  LAG       G P            P ++  FGDR                     
Sbjct: 272 VTSTLAGTGRQWWQGTPTSGPAREVDLSSPWDVAWFGDRLWIAMAGVHQLWTYDPQSATV 331

Query: 828 ------------DGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
                       DG  +E     P G+  + +G+ ++VADS    ++ +D     V T  
Sbjct: 332 RAAAGTTNEGLVDGPAAEAWFAQPSGLAVSADGERLWVADSETSALRWVD-RDEHVHTAV 390

Query: 875 GIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           G G    G +DGAA  A L  P G+    +G++ I+DT N+ +R  D
Sbjct: 391 GTGLFDFGHRDGAADQALLQHPIGVTALPDGSVAISDTYNHALRRYD 437



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 45/86 (52%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G + V+D+  H++ +LD     V    G G+ G +DG    A+ SEP 
Sbjct: 184 LRFPGKALLLPDGGLLVSDTTRHRLVELDADGETVRRHFGTGERGLRDGGPDEARFSEPQ 243

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLN 921
           G+    +G + +ADT N+ IR LDL 
Sbjct: 244 GLAVLPDGRVAVADTVNHAIRALDLT 269



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQG 661
           P  LA+     RL+++DS  + +   D D +    +G+   + G RDG+ D A    P G
Sbjct: 355 PSGLAVSADGERLWVADSETSALRWVDRDEHVHTAVGTGLFDFGHRDGAADQALLQHPIG 414

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           +      ++  ++DT NHALR  D  +  V TLA +  + SD
Sbjct: 415 VTALPDGSVA-ISDTYNHALRRYDPASGEVTTLATDVREPSD 455


>gi|451981204|ref|ZP_21929574.1| NHL repeat containing protein [Nitrospina gracilis 3/211]
 gi|451761567|emb|CCQ90828.1| NHL repeat containing protein [Nitrospina gracilis 3/211]
          Length = 488

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/492 (38%), Positives = 283/492 (57%), Gaps = 23/492 (4%)

Query: 437 LDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSA 495
           L W N A PL    +LKGKVV+LDFWT+CCINC+HV+P L+ +E+K+ +    V+GVHS 
Sbjct: 16  LPWFNAARPLDLP-ELKGKVVILDFWTFCCINCIHVIPTLKRIEEKFAEH-VVVIGVHSP 73

Query: 496 KFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGE 555
           KF  EK  + +  A+ RY I HP+V+D D  +W    + +WPT   +GP+G +L QL GE
Sbjct: 74  KFPGEKVTDNVERAIRRYEIVHPIVHDRDFKIWNRYAIRAWPTLVFIGPDGYILGQLPGE 133

Query: 556 GHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRL 615
            +   L++ + + +    +K  L      L      + +   S L FPGK+A    +   
Sbjct: 134 PNADLLEETMNSLVKELREKGFLQGNAADLIQPLKPETK---SELSFPGKIAYSESDKLF 190

Query: 616 FISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675
            ++D+NHN++V+ D +G    +IG SG  G  DG F++A+F RPQGL +  + ++++VAD
Sbjct: 191 AVADANHNQVVIADREGTIRHRIG-SGAVGKADGGFEEASFYRPQGLCF--QDDVVWVAD 247

Query: 676 TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735
           TENH LR+ID  +  V T+AG G +G   +         L+SPWDV        +Y A A
Sbjct: 248 TENHLLRKIDLNSKQVTTVAGTGDQGGFLRDTHPAKETALSSPWDVSLH--EGALYFANA 305

Query: 736 GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESS 795
           G HQI  +         F+G G E  L     L   FAQPSG+++     ++++ADSE+S
Sbjct: 306 GTHQIGRYHIAADTVEQFAGTGAE-ALQDGPRLQAPFAQPSGLTVGDG--KLFLADSETS 362

Query: 796 SIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADS 855
           +IR++ L   G      G       LF FGDRDG+G E +LQHPLGV+  + G +++ADS
Sbjct: 363 AIRSIELGGQGKVETYVG-----TGLFDFGDRDGVGKEAVLQHPLGVHYVE-GAVFIADS 416

Query: 856 YNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNII 915
           YNHKI+ LD A++ V T+         D      +L EPAG++   +  L+++DTNN+ I
Sbjct: 417 YNHKIRVLDLATHEVHTVEASVDIVCDD--KRCTRLWEPAGVL-CLDKVLYVSDTNNHRI 473

Query: 916 RYLDLNKEEPEL 927
             +DL+ E+ E+
Sbjct: 474 LKIDLDTEKTEI 485


>gi|302552781|ref|ZP_07305123.1| NHL repeat containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470399|gb|EFL33492.1| NHL repeat containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 605

 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 184/459 (40%), Positives = 266/459 (57%), Gaps = 34/459 (7%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT   Q+   DL+G++VVLDFWT+CC+NC+HVL +L  LE+K+
Sbjct: 7   RRARVRAPELTGKGGWLNTGGQQYTLADLRGRIVVLDFWTFCCVNCLHVLDELRELEEKH 66

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVHS KF +E D  A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+
Sbjct: 67  RDT-VVVIGVHSPKFVHEADHRAVVDAVERYGVEHPVLDDPELATWKQYAVRAWPTLVVI 125

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP--- 599
            P G ++AQ AGEGH   ++ LVE     +  K          +L + + P +   P   
Sbjct: 126 DPEGYVVAQHAGEGHVHAIERLVEELEAEHTAKG---------TLRRGDGPYVAPEPEPT 176

Query: 600 -LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNR 658
            L+FPGK A+ + +    +SD+  +++V    DG  +V+   SG  G  DGS D+A FN 
Sbjct: 177 VLRFPGK-ALLLPSGNFLVSDTTRHQLVELAGDGESVVRRIGSGARGFADGSADEAAFNE 235

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLL 715
           PQGL      +++ VADT NHALR +D     V TLAG G    +GS   G  +     L
Sbjct: 236 PQGLTLLDDGSVV-VADTVNHALRRLDLATGEVTTLAGTGRQWWQGSPTSGPAREVD--L 292

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
           +SPWDV +    +KV+IAMAG HQ+W +   DG     +G   E  ++G       FAQP
Sbjct: 293 SSPWDVAW--WQDKVWIAMAGVHQLWAYDPADGTVAVTAGTTNEGLVDGPGG-EAWFAQP 349

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           SG++ +PD   +++ADSE+S++R   ++  GS   A G       LF FG RDG   + L
Sbjct: 350 SGLAAAPD--RLWLADSETSALRW--VEPDGSVHTAVG-----TGLFDFGHRDGAAGQAL 400

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           LQHPLGV    +G + V+D+YNH +++ DPA+  V+TLA
Sbjct: 401 LQHPLGVTALPDGSVAVSDTYNHALRRYDPATGEVTTLA 439



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 7/160 (4%)

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
           R     S+   +F +P G++L  D   + VAD+ + ++R L+L TG    LAG       
Sbjct: 221 RGFADGSADEAAFNEPQGLTLLDDG-SVVVADTVNHALRRLDLATGEVTTLAGTG----R 275

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
             ++     G   EV L  P  V   ++ ++++A +  H++   DPA   V+  AG    
Sbjct: 276 QWWQGSPTSGPAREVDLSSPWDVAWWQD-KVWIAMAGVHQLWAYDPADGTVAVTAGTTNE 334

Query: 880 GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           G  DG    A  ++P+G+  A +  L++AD+  + +R+++
Sbjct: 335 GLVDGPGGEAWFAQPSGLAAAPD-RLWLADSETSALRWVE 373



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           +L+ P       +G   V+D+  H++ +L      V    G G  GF DG+A  A  +EP
Sbjct: 177 VLRFPGKALLLPSGNFLVSDTTRHQLVELAGDGESVVRRIGSGARGFADGSADEAAFNEP 236

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
            G+    +G++ +ADT N+ +R LDL     E+ TL   G Q
Sbjct: 237 QGLTLLDDGSVVVADTVNHALRRLDLATG--EVTTLAGTGRQ 276



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           +RL+++DS  + +   + DG+    +G+   + G RDG+   A    P G+      ++ 
Sbjct: 357 DRLWLADSETSALRWVEPDGSVHTAVGTGLFDFGHRDGAAGQALLQHPLGVTALPDGSVA 416

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            V+DT NHALR  D     V TLA +  + SD
Sbjct: 417 -VSDTYNHALRRYDPATGEVTTLATDLREPSD 447


>gi|407792264|ref|ZP_11139332.1| hypothetical protein B3C1_18191 [Gallaecimonas xiamenensis 3-C-1]
 gi|407197721|gb|EKE67773.1| hypothetical protein B3C1_18191 [Gallaecimonas xiamenensis 3-C-1]
          Length = 488

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 202/488 (41%), Positives = 274/488 (56%), Gaps = 39/488 (7%)

Query: 433 FPAKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           F  +L WLN   PL    DLKGKVV+LDFWTY C+NCMHVLPDL+ LE KY +    V+ 
Sbjct: 26  FGNELQWLNVEHPLSLN-DLKGKVVILDFWTYGCVNCMHVLPDLKKLEDKYGN-KLAVIS 83

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           VHS KF NEK L+ ++  V RYGISHPV ND D + W++  V +WPTF ++ P+G+++ Q
Sbjct: 84  VHSPKFANEKRLDTLKRIVARYGISHPVANDVDFSQWQQYAVRAWPTFVILTPDGRVVGQ 143

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDIL 611
            +GEG    LD +V A +  +  K   D  PLPL L    D     +PL  PGK  + + 
Sbjct: 144 TSGEGRYALLDQVVGALVEEFAGK--FDEKPLPLKLITFAD-----TPLAAPGK--VRVK 194

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
            + L ISDS HNRI+    DG  +V++  SGE   +DGS ++A F  PQG  +  +   L
Sbjct: 195 GDLLAISDSGHNRIIFARPDGR-VVKVVGSGEACAKDGSAEEACFASPQGTLF--QDQAL 251

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           YVADT NH +R ID  N  V T+AG G  G          S  L SPWD+   P    + 
Sbjct: 252 YVADTNNHLIRRIDLRNYQVSTVAGTGKLGGYLNANGAALSTALRSPWDLASLP-GGAIA 310

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           IAMAG HQIW+     G  +  +G+G E  ++     + SF QPSG  L  D  +++VAD
Sbjct: 311 IAMAGSHQIWQLKG--GKVQVLAGNGREALVDDDFK-DASFNQPSG--LFADAGQLWVAD 365

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
           +E+S+IR L+LK      L G        LF FG +DG   + LLQH LGV      ++ 
Sbjct: 366 AEASAIRRLDLKDQEVTTLVG------QGLFDFGLKDGAFKKALLQHALGVIRWDQQRLL 419

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN 911
           VAD+YNH ++ LD    + STLA        DG+     L+EP G+    +  + +ADTN
Sbjct: 420 VADTYNHALRWLDLDKQQASTLA------LPDGS-----LNEPGGLARLGD-KVLVADTN 467

Query: 912 NNIIRYLD 919
           ++ +  +D
Sbjct: 468 HDRLLLVD 475



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
           K   + ++DS +++I    P   RV  + G G+A  KDG+A  A  + P G +  Q+  L
Sbjct: 194 KGDLLAISDSGHNRIIFARP-DGRVVKVVGSGEACAKDGSAEEACFASPQGTL-FQDQAL 251

Query: 906 FIADTNNNIIRYLDL 920
           ++ADTNN++IR +DL
Sbjct: 252 YVADTNNHLIRRIDL 266


>gi|124003658|ref|ZP_01688507.1| NHL repeat [Microscilla marina ATCC 23134]
 gi|123991227|gb|EAY30679.1| NHL repeat [Microscilla marina ATCC 23134]
          Length = 508

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 199/506 (39%), Positives = 290/506 (57%), Gaps = 40/506 (7%)

Query: 419 SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFL 478
           +D + +   P  PE      WLNT      +D +GKVV+LDFWT+ CINC H++PDL  L
Sbjct: 29  ADYKTKGKYP-APEINTPYGWLNTNKSWQIKDFRGKVVLLDFWTFGCINCQHIIPDLRKL 87

Query: 479 EKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPT 538
           EK++ +    V+GVHSAKF +E+  + IR A+L++GI HPVVND    +W+  GVN+WPT
Sbjct: 88  EKEFPN-ELVVIGVHSAKFYSERANKNIRKAILKFGIEHPVVNDAKFKVWQSYGVNAWPT 146

Query: 539 FAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDND-PRLFT 597
             ++ P G+++   AGEG    +   ++  +   G K  ++ TPL   LEKD    +   
Sbjct: 147 VVLIDPEGRVVGNAAGEGFYNAVRLYIQKMVKERGDK--INRTPLKFMLEKDQQGNKTKH 204

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
           + L+FP K+ I      L+ISDS +NRI+  D +G  ++QIG SG +GL+DG FD ATF 
Sbjct: 205 TFLRFPSKI-IQGDKGELYISDSGNNRILKIDKNGKVLLQIG-SGTQGLKDGDFDKATFY 262

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK--GTSQLL 715
            P GLA   K + LYVADT+N+ +R +D     V+T+AG+G    DY  G++  G +   
Sbjct: 263 EPHGLAL--KGDFLYVADTKNNVIRRVDLKRKKVKTIAGDGR--LDYYFGKERWGVAVNP 318

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
           NSPWD+      E +YIA AG HQI        + + F+G G E   +GS    ++F QP
Sbjct: 319 NSPWDLWID--GEVMYIANAGNHQILTMDLQTNLVKRFAGSGREALTDGSFR-KSAFNQP 375

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           SG+  + +   +YVADSE+S+IRA++L  G      G        LF+FGD DG  ++  
Sbjct: 376 SGLVKNGN--TLYVADSEASAIRAIDLAKGEVSTPLG------KGLFEFGDVDGKANKAR 427

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           LQH +GV    N ++Y+AD+YN KIK  D  + R+ T                A L+EP 
Sbjct: 428 LQHAVGVTFRAN-KLYIADTYNGKIKTFDLKTQRLKT--------------FVAGLNEPN 472

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLN 921
            ++   N  ++++DTNN+ I  +DLN
Sbjct: 473 DVMFVGNA-MWVSDTNNHQIVKIDLN 497



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 91/156 (58%), Gaps = 13/156 (8%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
           +F +P G++L  DF+  YVAD++++ IR ++LK    + +AG   +     + FG ++  
Sbjct: 260 TFYEPHGLALKGDFL--YVADTKNNVIRRVDLKRKKVKTIAGDGRL----DYYFG-KERW 312

Query: 831 GSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA 889
           G  V    P  ++   +G++ Y+A++ NH+I  +D  +N V   AG G+    DG+   +
Sbjct: 313 GVAVNPNSPWDLWI--DGEVMYIANAGNHQILTMDLQTNLVKRFAGSGREALTDGSFRKS 370

Query: 890 QLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE 924
             ++P+G++  +NGN L++AD+  + IR +DL K E
Sbjct: 371 AFNQPSGLV--KNGNTLYVADSEASAIRAIDLAKGE 404



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
              L+ P  +     G++Y++DS N++I K+D  + +V    G G  G KDG    A   
Sbjct: 204 HTFLRFPSKIIQGDKGELYISDSGNNRILKIDK-NGKVLLQIGSGTQGLKDGDFDKATFY 262

Query: 893 EPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE 924
           EP G+  A  G+ L++ADT NN+IR +DL +++
Sbjct: 263 EPHGL--ALKGDFLYVADTKNNVIRRVDLKRKK 293


>gi|295837701|ref|ZP_06824634.1| NHL repeat protein [Streptomyces sp. SPB74]
 gi|197695928|gb|EDY42861.1| NHL repeat protein [Streptomyces sp. SPB74]
          Length = 610

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 180/455 (39%), Positives = 262/455 (57%), Gaps = 24/455 (5%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT    +   DL+G++V+LDFWT+CCINC+HVL +L  LE+K+
Sbjct: 9   RRARVRAPELVGKGGWLNTGGTSYSLADLRGRIVILDFWTFCCINCLHVLDELRELEEKH 68

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    ++GVHS KF +E +  A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+
Sbjct: 69  RDT-VVIIGVHSPKFVHEAEHAAVVDAVERYGVGHPVLDDPELATWKQYAVRAWPTLVVI 127

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   L  LV+     +  K  L     P        P      L+F
Sbjct: 128 DPEGYVVAQHAGEGHAHALATLVDELEAEHAAKGTLRRGEGPYV-----PPEPVAGDLRF 182

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK A+ +      +SD+  + +V  + DG  + +    GE GL DG    A FN PQGL
Sbjct: 183 PGK-ALRLPGGTFLVSDTTRHALVELEADGETVRRRIGGGERGLLDGDAATARFNEPQGL 241

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPW 719
           A    + ++ VADT NHALR +D  +  V TLAG G    +G    G  +  S  L+SPW
Sbjct: 242 ALLPDRAVV-VADTVNHALRRVDLASGEVTTLAGTGRQWWQGEPVAGAAREVS--LSSPW 298

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +     +V+IAMAG HQ+W ++   G  RA +G   E  ++G ++    FAQPSG++
Sbjct: 299 DVAW--FAGEVWIAMAGTHQLWAYAPETGTVRAAAGTTNEGLVDGPAA-EAWFAQPSGLA 355

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S D   +++AD+E+S++R ++ + G  R   G        LF FG RDG  ++ LLQHP
Sbjct: 356 VSADGERLWIADAETSAVRWID-RAGTVRTAVG------TGLFDFGHRDGAAAQALLQHP 408

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           LGV    +G + VAD+YNH +++ DPAS  V+TLA
Sbjct: 409 LGVTALPDGSVAVADTYNHALRRYDPASGEVTTLA 443



 Score = 43.1 bits (100), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD---- 883
           DG  +      P G+    +  + VAD+ NH ++++D AS  V+TLAG G+  ++     
Sbjct: 227 DGDAATARFNEPQGLALLPDRAVVVADTVNHALRRVDLASGEVTTLAGTGRQWWQGEPVA 286

Query: 884 GAALAAQLSEP 894
           GAA    LS P
Sbjct: 287 GAAREVSLSSP 297


>gi|392397842|ref|YP_006434443.1| NHL repeat protein,AhpC/TSA family protein [Flexibacter litoralis
           DSM 6794]
 gi|390528920|gb|AFM04650.1| NHL repeat protein,AhpC/TSA family protein [Flexibacter litoralis
           DSM 6794]
          Length = 543

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 191/509 (37%), Positives = 284/509 (55%), Gaps = 47/509 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE   K  W+NT       D KGK+++LDFWT+ CINC H++PDLE LE+++++    V+
Sbjct: 68  PEIDTKFGWVNTEKSYKLADFKGKIILLDFWTFGCINCQHIIPDLEKLEREFEN-ELVVI 126

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+HSAKF  E+  + IR A L++G+ HPVVND DM +W+  GV +WPT  ++ P GK++ 
Sbjct: 127 GIHSAKFSAEQSSQRIRQAALKFGVHHPVVNDADMKVWQSYGVRAWPTVTLISPTGKVVW 186

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA--- 607
           Q AGE   +D  + + A  L    K  L+       L K     +    L FP K+    
Sbjct: 187 QRAGESFYEDARNQILA--LKEQHKAELNTQKFDFQLAK-----VEKKELMFPSKIIEVK 239

Query: 608 ----IDILNNR--LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
                D  NN    +I+DS +NRI+  +L+G  +  IG+S ++G  DG+F++ +F  P G
Sbjct: 240 TENDTDNKNNEPTFWIADSGNNRIIKINLEGKVLETIGNS-KKGNTDGTFEETSFYEPHG 298

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL--NSPW 719
           LA +     LY+ADT+N+ ++E D VN TV+ + G G  G  Y  GEK   + +  NSPW
Sbjct: 299 LALSPNGEKLYIADTKNNVIKEADLVNKTVKIINGTGETG--YYFGEKSWGENINPNSPW 356

Query: 720 DVCY-KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
           D+   K     +YIA AG HQI + +  D     F+G G E+  +G      +F QPSG+
Sbjct: 357 DLLIDKKYPNTMYIANAGNHQILKMNLQDYKMERFAGSGREQLTDGDDFHKVAFNQPSGL 416

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
           +   +++  Y+AD+E+S+IR ++L+    R L G        LF FGD DG   + +LQH
Sbjct: 417 TQFENYL--YIADAEASAIRQIDLQKKEVRTLVGS------GLFDFGDNDGTAQKAVLQH 468

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGII 898
           P+ V+   N ++Y+AD+YN KIK LD   NRV T              L + L+EP  I+
Sbjct: 469 PVAVFYT-NNEVYIADTYNGKIKVLDLEKNRVKT--------------LISGLNEPNDIL 513

Query: 899 EAQNGNLFIADTNNNIIRYLDLNKEEPEL 927
              N  L+I+DTNN+ I  ++    E E+
Sbjct: 514 LIGNY-LYISDTNNHQILRVNTKTFEKEV 541


>gi|411003633|ref|ZP_11379962.1| hypothetical protein SgloC_12561 [Streptomyces globisporus C-1027]
          Length = 605

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 172/448 (38%), Positives = 260/448 (58%), Gaps = 24/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT   Q+   DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 10  PELIGKGGWLNTGDQQYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 69  IGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +G K  L     P        P    + L+FPGK A+ 
Sbjct: 129 AQHAGEGHAHAIEKLVEELEAEHGAKGTLRRGDGPYVA-----PEPVATHLRFPGK-ALL 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +    +SD+  +R+V  D DG  + +   +GE GL DG   +A F+ PQGLA      
Sbjct: 183 LPDGGFLVSDTTRHRLVELDADGETVRRHFGTGERGLSDGGPGEARFSEPQGLAV-LPDG 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            + VADT NHA+R +D       TLAG G    +G+   G  +G    L+SPWDV +   
Sbjct: 242 RVAVADTVNHAIRALDLTTGVTSTLAGTGRQWWQGTPTSGPARGVD--LSSPWDVAW--F 297

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            ++++IAMAG HQ+W +       R  +G   E  ++G ++    FAQPSG+++S D   
Sbjct: 298 GDRLWIAMAGVHQLWTYDPESATVRVAAGTTNEGLVDGPAA-EAWFAQPSGLAVSADGER 356

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R ++        +  G       LF FG RDG   + LLQHP+GV    
Sbjct: 357 LWVADSETSALRWVDRDEHVHTAVGTG-------LFDFGHRDGAADQALLQHPIGVTALP 409

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + ++D+YNH +++ DPAS  V+TLA
Sbjct: 410 DGSVAISDTYNHALRRYDPASGEVTTLA 437



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 57/227 (25%)

Query: 747 DGVT-RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           DG T R   G G ER L+        F++P G+++ PD   + VAD+ + +IRAL+L TG
Sbjct: 204 DGETVRRHFGTG-ERGLSDGGPGEARFSEPQGLAVLPD-GRVAVADTVNHAIRALDLTTG 261

Query: 806 GSRLLAG-------GDPIF----------PDNLFKFGDR--------------------- 827
            +  LAG       G P            P ++  FGDR                     
Sbjct: 262 VTSTLAGTGRQWWQGTPTSGPARGVDLSSPWDVAWFGDRLWIAMAGVHQLWTYDPESATV 321

Query: 828 ------------DGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
                       DG  +E     P G+  + +G+ ++VADS    ++ +D     V T  
Sbjct: 322 RVAAGTTNEGLVDGPAAEAWFAQPSGLAVSADGERLWVADSETSALRWVD-RDEHVHTAV 380

Query: 875 GIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           G G    G +DGAA  A L  P G+    +G++ I+DT N+ +R  D
Sbjct: 381 GTGLFDFGHRDGAADQALLQHPIGVTALPDGSVAISDTYNHALRRYD 427



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%)

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
           +G   V+D+  H++ +LD     V    G G+ G  DG    A+ SEP G+    +G + 
Sbjct: 185 DGGFLVSDTTRHRLVELDADGETVRRHFGTGERGLSDGGPGEARFSEPQGLAVLPDGRVA 244

Query: 907 IADTNNNIIRYLDLN 921
           +ADT N+ IR LDL 
Sbjct: 245 VADTVNHAIRALDLT 259



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQG 661
           P  LA+     RL+++DS  + +   D D +    +G+   + G RDG+ D A    P G
Sbjct: 345 PSGLAVSADGERLWVADSETSALRWVDRDEHVHTAVGTGLFDFGHRDGAADQALLQHPIG 404

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           +      ++  ++DT NHALR  D  +  V TLA +  + SD
Sbjct: 405 VTALPDGSVA-ISDTYNHALRRYDPASGEVTTLATDVREPSD 445


>gi|294630411|ref|ZP_06708971.1| NHL repeat protein [Streptomyces sp. e14]
 gi|292833744|gb|EFF92093.1| NHL repeat protein [Streptomyces sp. e14]
          Length = 609

 Score =  320 bits (819), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 175/458 (38%), Positives = 261/458 (56%), Gaps = 30/458 (6%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKK 481
            R+     PE   K  WLNT   Q+   DL+G++V+LDFWT+CCINC+HVL +L  LE K
Sbjct: 10  TRRARVRAPELTGKGGWLNTGGNQYTLADLRGRIVILDFWTFCCINCLHVLDELRELEAK 69

Query: 482 YKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAV 541
           ++D    ++GVHS KF +E + +A+ +AV RYG+ HPV++D ++  W++  V +WPT  V
Sbjct: 70  HRDT-VVIIGVHSPKFVHEAEHQAVVDAVERYGVEHPVLDDPELATWKQYAVRAWPTLVV 128

Query: 542 VGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP-- 599
           + P G ++AQ AGEGH   L  LVE     +  K          +L + + P +   P  
Sbjct: 129 IDPEGYVVAQHAGEGHAHALAKLVEELEAEHAAKG---------TLRRGDGPYVAPEPEP 179

Query: 600 --LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
             L+FPGK A+ + +    +SD+  +++V    DG  +V+   SG  G  DG+ +DA FN
Sbjct: 180 TTLRFPGK-ALLLPSGNFLVSDTTRHQLVELAADGESVVRRIGSGARGFADGAAEDAAFN 238

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LN 716
            PQGLA       + VADT NHALR  D     + TLAG G +    +  E    ++ L+
Sbjct: 239 EPQGLAL-LDDGAVVVADTVNHALRRFDPATGRITTLAGTGRQWMQGEATEGPAREVNLS 297

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SPWDV +     +V+IAMAG HQ+W +   DG     +G   E  ++G  +    FAQPS
Sbjct: 298 SPWDVAW--WQGRVWIAMAGVHQLWAYDPADGTVSVTAGTTNEGLVDGPGA-EAWFAQPS 354

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           G++ +P+   +++ADSE+S++R ++        +  G       LF FG RDG   + LL
Sbjct: 355 GLAATPE--RLWLADSETSALRWMDPDGHVHTAVGTG-------LFDFGHRDGAAGQALL 405

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           QHPLGV    +G + V+D+YNH +++ DPA+  V+TLA
Sbjct: 406 QHPLGVTALPDGSVAVSDTYNHALRRYDPATGEVTTLA 443



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 7/160 (4%)

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
           R     ++ + +F +P G++L  D   + VAD+ + ++R  +  TG    LAG       
Sbjct: 225 RGFADGAAEDAAFNEPQGLALLDDGA-VVVADTVNHALRRFDPATGRITTLAGTG----R 279

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
              +    +G   EV L  P  V   + G++++A +  H++   DPA   VS  AG    
Sbjct: 280 QWMQGEATEGPAREVNLSSPWDVAWWQ-GRVWIAMAGVHQLWAYDPADGTVSVTAGTTNE 338

Query: 880 GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           G  DG    A  ++P+G+  A    L++AD+  + +R++D
Sbjct: 339 GLVDGPGAEAWFAQPSGLA-ATPERLWLADSETSALRWMD 377



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +L      V    G G  GF DGAA  A  +EP 
Sbjct: 182 LRFPGKALLLPSGNFLVSDTTRHQLVELAADGESVVRRIGSGARGFADGAAEDAAFNEPQ 241

Query: 896 GIIEAQNGNLFIADTNNNIIRYLD 919
           G+    +G + +ADT N+ +R  D
Sbjct: 242 GLALLDDGAVVVADTVNHALRRFD 265



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
            RL+++DS  + +   D DG+    +G+   + G RDG+   A    P G+      ++ 
Sbjct: 361 ERLWLADSETSALRWMDPDGHVHTAVGTGLFDFGHRDGAAGQALLQHPLGVTALPDGSVA 420

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            V+DT NHALR  D     V TLA +  + SD
Sbjct: 421 -VSDTYNHALRRYDPATGEVTTLATDLREPSD 451


>gi|256556932|gb|ACU83555.1| thiol-disulfide isomerase/thioredoxin [uncultured bacterium
           HF130_AEPn_1]
          Length = 497

 Score =  318 bits (815), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 197/509 (38%), Positives = 276/509 (54%), Gaps = 42/509 (8%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           T I  +     +WLN       +DL GK V+ DFWTYCCINC+HV+PDL++LE+KY D  
Sbjct: 24  TSIYDKVLKDREWLNAERPLRSKDLIGKAVLFDFWTYCCINCIHVIPDLKYLEEKYGD-K 82

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             V+GVHSAKF NEK  + I   + +YGI HPV+ND D  +WR  G  +WPT A++   G
Sbjct: 83  LVVIGVHSAKFTNEKVSKNIMKTIRKYGIEHPVINDKDFIVWRMFGARAWPTLALLDTTG 142

Query: 547 KLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKL 606
           + +  L+GEGHR+ LD L+          K+LD       L K          L FP K+
Sbjct: 143 RPVKLLSGEGHRETLDKLIS---------KILDGKHQEKKLRKRKRD---LKKLYFPSKM 190

Query: 607 AIDI---LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
                  L    F++DS+++R++  DL G   + IG SG+EG +DG    A F RP GLA
Sbjct: 191 VYSKSKSLGELFFLTDSSNHRVLAIDLSGKVKMVIG-SGKEGNKDGDIKVARFRRPHGLA 249

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVC 722
           ++ K +LLY+ADT+NH+++ +D  +  V TL+GNG +G   +    K     + SPWD+ 
Sbjct: 250 FDEKNDLLYIADTDNHSIKSLDLKSKKVLTLSGNGERGFKRKAENAKAKGHPMASPWDLQ 309

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
            K   EK+ IAMAG HQ+WE     G     +G+G E   +G    NT  AQ SG+    
Sbjct: 310 LK--GEKLLIAMAGTHQLWEMDLKKGTVSVIAGNGGESIEDGPYPKNT-LAQTSGMDQKG 366

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
           D  ++Y  DSE+SS+R   L+ G  R L G        LF FG  DG   +   QHPLG+
Sbjct: 367 D--DLYFVDSETSSLRV--LEKGSIRTLVG------KGLFHFGLEDGPRDKAKFQHPLGI 416

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVST-LAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           + + +  I +AD+YNH I+  D  +N VST L G    GF        ++ EP  ++   
Sbjct: 417 HISGD-LILLADTYNHAIRTYDLKANTVSTLLKGKLPGGF--------EIEEPNDVL-VL 466

Query: 902 NGNLFIADTNNNIIRYLDLNKEEPELQTL 930
              LFI +TN + I   DL  ++  L +L
Sbjct: 467 GKELFIINTNRHEILKYDLVSKKLSLFSL 495


>gi|239989050|ref|ZP_04709714.1| hypothetical protein SrosN1_17240 [Streptomyces roseosporus NRRL
           11379]
 gi|291446053|ref|ZP_06585443.1| alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal
           allergen [Streptomyces roseosporus NRRL 15998]
 gi|291349000|gb|EFE75904.1| alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal
           allergen [Streptomyces roseosporus NRRL 15998]
          Length = 605

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 171/448 (38%), Positives = 259/448 (57%), Gaps = 24/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT   Q+   DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 10  PELIGKGGWLNTGDQQYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 69  IGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +G K  L     P        P    + L+FPGK A+ 
Sbjct: 129 AQHAGEGHAHAIEKLVEELEAEHGAKGTLRRGDGPYVA-----PEPVATHLRFPGK-ALL 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +    +SD+  +R+V  D DG  + +   +GE GL DG  D+A F+ PQGLA      
Sbjct: 183 LPDGGFLVSDTTRHRLVELDADGETVRRHFGTGERGLNDGGPDEARFSEPQGLAV-LPDG 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            + VADT NHA+R +D       TLAG G    +G+   G  +     L+SPWD+ +   
Sbjct: 242 RVAVADTVNHAIRALDLTTGVTSTLAGTGRQWWQGTPTSGPAREVD--LSSPWDLAW--F 297

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            ++++IAMAG HQ+W +       R  +G   E  ++G ++    FAQPSG+++S D   
Sbjct: 298 GDRLWIAMAGVHQLWTYDPESATVRVAAGTTNEGLVDGPAA-EAWFAQPSGLAVSADGER 356

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R ++        +  G       LF FG RDG   + LLQHP+GV    
Sbjct: 357 LWVADSETSALRWVDRDEHVHTAVGTG-------LFDFGHRDGAADQALLQHPIGVTALP 409

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + ++D YNH +++ DPAS  V+TLA
Sbjct: 410 DGSVAISDMYNHALRRYDPASGEVTTLA 437



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)

Query: 747 DGVT-RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           DG T R   G G ER LN        F++P G+++ PD   + VAD+ + +IRAL+L TG
Sbjct: 204 DGETVRRHFGTG-ERGLNDGGPDEARFSEPQGLAVLPDG-RVAVADTVNHAIRALDLTTG 261

Query: 806 GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
            +  LAG         ++     G   EV L  P  +    + ++++A +  H++   DP
Sbjct: 262 VTSTLAGTG----RQWWQGTPTSGPAREVDLSSPWDLAWFGD-RLWIAMAGVHQLWTYDP 316

Query: 866 ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKE 923
            S  V   AG    G  DG A  A  ++P+G+ + A    L++AD+  + +R++D ++ 
Sbjct: 317 ESATVRVAAGTTNEGLVDGPAAEAWFAQPSGLAVSADGERLWVADSETSALRWVDRDEH 375



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +LD     V    G G+ G  DG    A+ SEP 
Sbjct: 174 LRFPGKALLLPDGGFLVSDTTRHRLVELDADGETVRRHFGTGERGLNDGGPDEARFSEPQ 233

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLN 921
           G+    +G + +ADT N+ IR LDL 
Sbjct: 234 GLAVLPDGRVAVADTVNHAIRALDLT 259



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQG 661
           P  LA+     RL+++DS  + +   D D +    +G+   + G RDG+ D A    P G
Sbjct: 345 PSGLAVSADGERLWVADSETSALRWVDRDEHVHTAVGTGLFDFGHRDGAADQALLQHPIG 404

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           +      ++  ++D  NHALR  D  +  V TLA +  + SD
Sbjct: 405 VTALPDGSVA-ISDMYNHALRRYDPASGEVTTLATDVREPSD 445


>gi|390559793|ref|ZP_10244078.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
 gi|390173637|emb|CCF83377.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
          Length = 442

 Score =  315 bits (808), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 192/463 (41%), Positives = 264/463 (57%), Gaps = 24/463 (5%)

Query: 471 VLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530
           +LP L  +E+++ D    ++GVHSAKF  E+   ++R+A+ RY I HPV+ND + ++W E
Sbjct: 1   MLPQLGKVERQFPDA-LVIIGVHSAKFPAERAGGSLRSAIQRYDIEHPVINDINFDVWAE 59

Query: 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKD 590
             + +WPT   + P G+++ Q  GE     L   V+  +  Y K+ ++    +P  + + 
Sbjct: 60  YAIRAWPTLIFIDPEGRVIGQHEGEIDAGSLAATVQRLIEHYDKEGIISRASIP-GIARM 118

Query: 591 NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
             P   +  L FPGK+  D   NRLFI+DS HNRIVVT LDG     IG SG+ GL DG 
Sbjct: 119 ARP---SGALAFPGKVLADAAGNRLFIADSGHNRIVVTRLDGAEPWMIG-SGQPGLADGD 174

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
              A FN PQG+A     ++LY+ADT NH +R +D  +  V T+AG G  G  Y      
Sbjct: 175 AATAQFNHPQGMALAG--DILYLADTRNHVIRRVDLASRQVETIAGTGEPGMSYASAGSA 232

Query: 711 TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
            +  L SPWDV  +   + +YIAMAG HQIW     +   R ++GDG E   +G   L T
Sbjct: 233 RTIDLRSPWDVLLQ--GDTLYIAMAGMHQIWALDINESWLRPYAGDGREGLRDG--RLET 288

Query: 771 SF-AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
           ++ AQPSGI    D   +YVADSE+S+IR  +L     R L     I    LF+FGD DG
Sbjct: 289 AWLAQPSGIDT--DGTRLYVADSETSAIRTADLP---PRDLV--QTIVGIGLFEFGDVDG 341

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA 889
            G++V LQHPLG+    +G +YVADSYNHKIK+L P   R  T  G G  G +DG   AA
Sbjct: 342 TGNQVRLQHPLGL-AVGDGVVYVADSYNHKIKRLYPTERRCETWLGDGTPGDRDGVREAA 400

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLEL 932
           +  EP G+  A +  L+IADTNN+ IR  +L  E   + TL +
Sbjct: 401 RFHEPGGVSLAGD-RLYIADTNNHAIRVAEL--ETGRVTTLRI 440


>gi|357400623|ref|YP_004912548.1| hypothetical protein SCAT_3039 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|386356676|ref|YP_006054922.1| hypothetical protein SCATT_30300 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|337767032|emb|CCB75743.1| conserved protein of unknown function [Streptomyces cattleya NRRL
           8057 = DSM 46488]
 gi|365807185|gb|AEW95401.1| hypothetical protein SCATT_30300 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
          Length = 613

 Score =  315 bits (807), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 177/447 (39%), Positives = 256/447 (57%), Gaps = 22/447 (4%)

Query: 432 EFPAKLDWLNTAPLQ-FRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           E   K  WLNT   +   R+L+G +V+LDFWT+CCINC+HVL +L  LE+K++D    ++
Sbjct: 18  ELIGKGGWLNTGGSEPTLRELRGSIVILDFWTFCCINCLHVLDELRELEEKHRDT-VVII 76

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF +E D  A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+ P G ++A
Sbjct: 77  GVHSPKFVHEADHAAVVDAVERYGVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVVA 136

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
           Q AGEGH   +  LVE     +  K  L     P        P    + L+FPGK A+ +
Sbjct: 137 QHAGEGHAHAIATLVEELEAEHAAKGTLRRGDGPYV-----PPEPVPTDLRFPGK-ALLL 190

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
               L +SDS  + +V    DG  +V+   SGE GL DG  D A F+ PQGLA       
Sbjct: 191 PTGNLLVSDSTRHALVELAPDGETVVRRIGSGERGLADGPADRARFSEPQGLALLPDGES 250

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           + VADT NHALR +D  +  V T+AG G    +GS   G  +  +  L+SPWDV +   +
Sbjct: 251 VIVADTVNHALRRVDLASGEVTTVAGTGRQWWQGSPVAGPAREVA--LSSPWDVAW--YD 306

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           ++V+IAMAG HQ+W +   D      +G   E  ++G +     FAQPSG++ + D   +
Sbjct: 307 DRVWIAMAGVHQLWTYDPADATVAVAAGTTNEGLVDGPAG-QAWFAQPSGLAAAGD--RL 363

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +VADSE+S++R +     G  +           LF FG RDG   + LLQHP+GV    +
Sbjct: 364 WVADSETSALRYVTRGEDGYEVRTA----VGTGLFDFGHRDGPAGQALLQHPIGVTALPD 419

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLA 874
           G + V+D+YNH +++ DPA++ VSTLA
Sbjct: 420 GSVAVSDTYNHALRRYDPAADEVSTLA 446



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 9/181 (4%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V R  SG   ER L    +    F++P G++L PD   + VAD+ + ++R ++L +G   
Sbjct: 216 VRRIGSG---ERGLADGPADRARFSEPQGLALLPDGESVIVADTVNHALRRVDLASGEVT 272

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
            +AG         ++     G   EV L  P  V    + ++++A +  H++   DPA  
Sbjct: 273 TVAGTG----RQWWQGSPVAGPAREVALSSPWDVAWYDD-RVWIAMAGVHQLWTYDPADA 327

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQ 928
            V+  AG    G  DG A  A  ++P+G+  A +  L++AD+  + +RY+   ++  E++
Sbjct: 328 TVAVAAGTTNEGLVDGPAGQAWFAQPSGLAAAGD-RLWVADSETSALRYVTRGEDGYEVR 386

Query: 929 T 929
           T
Sbjct: 387 T 387



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P        G + V+DS  H + +L P    V    G G+ G  DG A  A+ SEP 
Sbjct: 181 LRFPGKALLLPTGNLLVSDSTRHALVELAPDGETVVRRIGSGERGLADGPADRARFSEPQ 240

Query: 896 GIIEAQNG-NLFIADTNNNIIRYLDLNKEE 924
           G+    +G ++ +ADT N+ +R +DL   E
Sbjct: 241 GLALLPDGESVIVADTVNHALRRVDLASGE 270


>gi|383636240|ref|ZP_09950646.1| redoxin domain-containing protein [Streptomyces chartreusis NRRL
           12338]
          Length = 605

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 181/465 (38%), Positives = 265/465 (56%), Gaps = 34/465 (7%)

Query: 418 ISDVENRKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           ++D   R+     PE   K  WLNT   Q+   DL+G++V+LDFWT+CCINC+HVL +L 
Sbjct: 1   MNDSAPRRARVRAPELTGKGGWLNTGGQQYTLADLRGRIVILDFWTFCCINCLHVLDELR 60

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
            LE++++D    V+GVHS KF +E +  A+ +AV RYG+ HPV++D ++  W++  V +W
Sbjct: 61  ELEERHRDT-VVVIGVHSPKFVHEAEHSAVVDAVERYGVEHPVLDDPELATWKQYAVRAW 119

Query: 537 PTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF 596
           PT  V+ P G ++AQ AGEGH   ++ LV      +  K          +L + + P + 
Sbjct: 120 PTLVVIDPEGYVVAQHAGEGHAHAIERLVTELEAEHEAKG---------TLRRGDGPYVA 170

Query: 597 TSP----LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
             P    L+FPGK A+ + +    +SD+  +++V    DG  +V+   SG  G  DG   
Sbjct: 171 PEPEPTVLRFPGK-ALLLPSGTFLVSDTTRHQLVELAEDGESVVRRIGSGTRGFADGPTG 229

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEK 709
            A FN PQGLA   + +++ VADT NHALR +D     V TLAG G    +GS   G  +
Sbjct: 230 TAAFNEPQGLALLDEGSVV-VADTVNHALRRLDLTTGEVTTLAGTGRQWWQGSPTSGPAR 288

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLN 769
                L+SPWDV       KV+IAMAG HQ+W +   +G     +G   E  ++G  +  
Sbjct: 289 EVD--LSSPWDVAL--WQGKVWIAMAGVHQLWAYDPAEGTVAVAAGTTNEGLVDGPGA-E 343

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
             FAQPSG++ +PD   +++ADSE+S++R +     GS   A G       LF FG RDG
Sbjct: 344 AWFAQPSGLAATPD--RLWLADSETSALRWVTPD--GSVHTAVG-----TGLFDFGHRDG 394

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
              + LLQHPLGV    +G + VAD+YNH +++ DPA+  V+TLA
Sbjct: 395 SAGQALLQHPLGVTALPDGSVAVADTYNHALRRYDPATGEVTTLA 439



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 7/150 (4%)

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
             +F +P G++L  D   + VAD+ + ++R L+L TG    LAG         ++     
Sbjct: 230 TAAFNEPQGLALL-DEGSVVVADTVNHALRRLDLTTGEVTTLAGTG----RQWWQGSPTS 284

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA 888
           G   EV L  P  V   + G++++A +  H++   DPA   V+  AG    G  DG    
Sbjct: 285 GPAREVDLSSPWDVALWQ-GKVWIAMAGVHQLWAYDPAEGTVAVAAGTTNEGLVDGPGAE 343

Query: 889 AQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           A  ++P+G+  A    L++AD+  + +R++
Sbjct: 344 AWFAQPSGLA-ATPDRLWLADSETSALRWV 372



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           +L+ P       +G   V+D+  H++ +L      V    G G  GF DG    A  +EP
Sbjct: 177 VLRFPGKALLLPSGTFLVSDTTRHQLVELAEDGESVVRRIGSGTRGFADGPTGTAAFNEP 236

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
            G+     G++ +ADT N+ +R LDL     E+ TL   G Q
Sbjct: 237 QGLALLDEGSVVVADTVNHALRRLDLTTG--EVTTLAGTGRQ 276



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK----D 883
           DG         P G+     G + VAD+ NH +++LD  +  V+TLAG G+  ++     
Sbjct: 225 DGPTGTAAFNEPQGLALLDEGSVVVADTVNHALRRLDLTTGEVTTLAGTGRQWWQGSPTS 284

Query: 884 GAALAAQLSEPAGIIEAQNGNLFIA 908
           G A    LS P  +   Q G ++IA
Sbjct: 285 GPAREVDLSSPWDVALWQ-GKVWIA 308



 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           +RL+++DS  + +     DG+    +G+   + G RDGS   A    P G+      ++ 
Sbjct: 357 DRLWLADSETSALRWVTPDGSVHTAVGTGLFDFGHRDGSAGQALLQHPLGVTALPDGSV- 415

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            VADT NHALR  D     V TLA +  + SD
Sbjct: 416 AVADTYNHALRRYDPATGEVTTLATDLREPSD 447


>gi|374988208|ref|YP_004963703.1| hypothetical protein SBI_05452 [Streptomyces bingchenggensis BCW-1]
 gi|297158860|gb|ADI08572.1| hypothetical protein SBI_05452 [Streptomyces bingchenggensis BCW-1]
          Length = 609

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 176/451 (39%), Positives = 261/451 (57%), Gaps = 26/451 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  W+NT   +    D +G +++LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 10  PELQGRT-WINTGGKELSLADFRGSILILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 67

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 68  VGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 127

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   L+ LV      +G K  L     P        P    + L+FPGK A+ 
Sbjct: 128 AQHAGEGHAHALETLVAELEAEHGAKGTLRRGDGPYV-----PPEPVATELRFPGK-ALL 181

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           +      +SD+  +++V    DG  +++   SGE GL DG  D A F+ PQGLA      
Sbjct: 182 LPGGTFLVSDTTRHQLVELAADGESVLRRIGSGERGLVDGPADRARFSEPQGLALLPDGT 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
           ++ VADT NHALR +D     VRT+AG G    +GS   G  +     L+SPWDV +   
Sbjct: 242 VI-VADTVNHALRSLDLATGEVRTVAGTGRQWWQGSPAAGPAREVD--LSSPWDVAW--F 296

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            ++++IAMAG HQ+W +   DG  RA +G   E  ++G ++    FAQPSG++ + D   
Sbjct: 297 ADRLWIAMAGVHQLWTYDPADGTVRAAAGTTNEGLVDGPAA-EAWFAQPSGLAATED--R 353

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPI---FPDNLFKFGDRDGMGSEVLLQHPLGVY 843
           +++ADSE+S++R +     G+   AGG  +       LF FG RDG   + L QHPLGV 
Sbjct: 354 LWIADSETSAVRYVERDRDGA---AGGFVVRTAVGTGLFDFGHRDGHADQALFQHPLGVT 410

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
              +G + V+D+YNH +++ DPAS  VSTLA
Sbjct: 411 ALPDGSVAVSDTYNHALRRFDPASGEVSTLA 441



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 7/165 (4%)

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
           ER L    +    F++P G++L PD   + VAD+ + ++R+L+L TG  R +AG      
Sbjct: 215 ERGLVDGPADRARFSEPQGLALLPDGT-VIVADTVNHALRSLDLATGEVRTVAGTG---- 269

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
              ++     G   EV L  P  V    + ++++A +  H++   DPA   V   AG   
Sbjct: 270 RQWWQGSPAAGPAREVDLSSPWDVAWFAD-RLWIAMAGVHQLWTYDPADGTVRAAAGTTN 328

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
            G  DG A  A  ++P+G+   ++  L+IAD+  + +RY++ +++
Sbjct: 329 EGLVDGPAAEAWFAQPSGLAATED-RLWIADSETSAVRYVERDRD 372



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P        G   V+D+  H++ +L      V    G G+ G  DG A  A+ SEP 
Sbjct: 173 LRFPGKALLLPGGTFLVSDTTRHQLVELAADGESVLRRIGSGERGLVDGPADRARFSEPQ 232

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
           G+    +G + +ADT N+ +R LDL   E
Sbjct: 233 GLALLPDGTVIVADTVNHALRSLDLATGE 261



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 612 NNRLFISDSNHN--RIVVTDLDG---NFIVQIGSSG---EEGLRDGSFDDATFNRPQGLA 663
            +RL+I+DS  +  R V  D DG    F+V+        + G RDG  D A F  P G+ 
Sbjct: 351 EDRLWIADSETSAVRYVERDRDGAAGGFVVRTAVGTGLFDFGHRDGHADQALFQHPLGVT 410

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
                ++  V+DT NHALR  D  +  V TLA +  + SD
Sbjct: 411 ALPDGSV-AVSDTYNHALRRFDPASGEVSTLATDLREPSD 449


>gi|440789641|gb|ELR10946.1| NHL repeat containing 2 isoform 3, putative [Acanthamoeba castellanii
            str. Neff]
          Length = 934

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 226/688 (32%), Positives = 346/688 (50%), Gaps = 115/688 (16%)

Query: 435  AKLDWLNTAP-LQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV-VGV 492
            A + W NT   L     LKGKVVVLDFWTYCCINC+ ++P L  +E++Y   P  V VGV
Sbjct: 68   AHVKWFNTREDLTLATHLKGKVVVLDFWTYCCINCIQLVPKLHEVEQRYAGNPEVVFVGV 127

Query: 493  HSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQL 552
            HS KF+NEK+  ++R+A++++ I HP VND D +LWR +G   WP+ AV+ P+G L+   
Sbjct: 128  HSPKFENEKEDASVRDAIIKHEIDHPCVNDPDRHLWRHIGAGGWPSLAVISPSGSLVYIT 187

Query: 553  AGEGHRK--DLDDLVEAALLFYG--------KKKLLDNTP-LPLSLEKDND--------- 592
             G G +K  +L  LV++ LL Y         ++++++ T     S + D D         
Sbjct: 188  VGGGQQKMNELQALVDSLLLLYAAESDLRQIRRQVVEFTQRRKASSDDDGDGSQQAEPQT 247

Query: 593  ------------------------PRLFTSPLKFP---GKLAIDILNNRL---FISDSNH 622
                                    P L   P++      KLA+     R       D   
Sbjct: 248  TVVDKGKQNDVDDDDEEEDDGQALPPLNRKPVQLALEKDKLALGQAPLRFPHGVAVDREG 307

Query: 623  NRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT------------FNRPQGLAYNAKKNL 670
            +R+ V D   + I+ +   G      GS DDAT            F+ P GL+Y A ++ 
Sbjct: 308  DRMFVADSGHHRILVLSLDGAFRTAIGS-DDATTGLVDGDYATARFHSPLGLSY-AGEDK 365

Query: 671  LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
            LYVAD+ENH +R +    + V T+AG G +G + +GG +     L++PWDV        +
Sbjct: 366  LYVADSENHCIRCVRLAEERVVTVAGTGQRGYERKGGGRALEWSLSNPWDVASH--GHDL 423

Query: 731  YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS-LNTSFAQPSGISLSPDF----M 785
            YIAMAG HQIW+++         SG G E N N     L + +AQPSG+S++ D     +
Sbjct: 424  YIAMAGTHQIWKYNEQSEEISLVSGSGSELNFNHDDDILQSGWAQPSGLSVAHDSKKGDV 483

Query: 786  EIYVADSESSSIRALNL---KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
             ++VAD+ESS++RA +    ++    ++ GG  + P +LF FGD DG G+   LQHPLGV
Sbjct: 484  SLFVADAESSTVRATHFGQDRSYTETIVGGG--LDPSDLFAFGDADGKGTAARLQHPLGV 541

Query: 843  Y-------CAKN---GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
                     A+    G + V+D+YNH++K +DP    V TLAG G+A   DG  + A  +
Sbjct: 542  LYIPAAAGAARKGLGGSVVVSDTYNHRLKLVDPRKKAVVTLAGTGRAALIDGTGVEAAFA 601

Query: 893  EPAGI-IEAQNGN----LFIADTNNNIIRYLDLNKEEPELQTLELKGV-----QPPTPKS 942
            EP G+ + + NG+    + + DTNN+ +R L+L      ++TL++ GV       P P +
Sbjct: 602  EPTGLALHSLNGSGEPVVVVCDTNNHALRLLNLATR--GVKTLDITGVPRLTAAVPEPST 659

Query: 943  RS------PKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVE 996
             +      P  L  +  P   T+ V    +  G   LK++ P ++H S     ++ V + 
Sbjct: 660  TTDSTRPVPAYLGLQRQPIEATLHV--ADTPNGQFALKLTAPPKHHISA---GEWKVHLV 714

Query: 997  PENAVIIDPLDGNL----SPEGSAVLHF 1020
            PE+ + +    G L      +G+ V+ F
Sbjct: 715  PESWIKLAQAKGRLPGRAEDDGAVVIGF 742


>gi|389875076|ref|YP_006374432.1| NHL repeat-containing protein [Tistrella mobilis KA081020-065]
 gi|388532256|gb|AFK57450.1| NHL repeat-containing protein [Tistrella mobilis KA081020-065]
          Length = 487

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 192/496 (38%), Positives = 269/496 (54%), Gaps = 25/496 (5%)

Query: 431 PEFPAK-LDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           P FP   + W N A P    +DL+G++V+LDFWT+CCINCMHVLP L  +E++Y D    
Sbjct: 6   PHFPTDGVTWFNLAGPPPTLQDLRGRLVILDFWTFCCINCMHVLPVLAEIERRYPDT-VA 64

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVHS KF  E+D   +  A+ RYGI+HPV++D +M +WRE  + +WPT   +GP+G  
Sbjct: 65  VIGVHSPKFTAERDPAKVAGAIARYGITHPVIHDPEMRMWREYAIRAWPTLGFIGPDGAY 124

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDP-RLFTSPLKFPGKLA 607
           L    GE   + L +LV+  L    +   L   P  L L    +P RL   P K   +  
Sbjct: 125 LGAAPGEPALEKLVELVDRVLEEAREGGSL--APATLDLAPAPEPARLLRHPAKL-KEFR 181

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
               +    I+D+ H++I + D  GN I ++G SGE GL DG  + A F RPQGL   A 
Sbjct: 182 YGRGSAGWAIADAGHHQIALFDNAGNEIRRVG-SGEPGLVDGPAESARFQRPQGLI--AA 238

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
              ++VADT NHA+R ID  +  V T+AG G +G   +         L SPWD+ Y+   
Sbjct: 239 DGAIFVADTWNHAVRRIDVASGEVTTIAGTGRRGPILKAPAPAIDSALASPWDLEYR--E 296

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
             +Y+A AG HQ+       GV    +G G E  ++G +    + AQPS ++L  D   +
Sbjct: 297 GVLYVANAGTHQLARIDLETGVLEPLAGTGAEALVDGPAD-QAALAQPSALALKED--RL 353

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +  D+E+SS+R L+L  G    L G      D LF+FG  DG       QHPLG+    N
Sbjct: 354 WFIDAETSSLRRLDLAGGTVSTLVG------DGLFEFGMVDGPARTARFQHPLGLCFDMN 407

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
           G I VAD+YN  I+ +DP +  VS+L       F D   L   LSEPAG+    +G +F+
Sbjct: 408 GNILVADAYNDAIRVVDPETGMVSSLDDPPYDCFDD---LCRPLSEPAGVAVDDDGVVFV 464

Query: 908 ADTNNN-IIRYLDLNK 922
           ADT N+ I  Y D+ +
Sbjct: 465 ADTGNDRIFLYHDVFR 480



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 8/115 (6%)

Query: 835 LLQHPLGV----YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
           LL+HP  +    Y   +    +AD+ +H+I   D A N +  + G G+ G  DG A +A+
Sbjct: 170 LLRHPAKLKEFRYGRGSAGWAIADAGHHQIALFDNAGNEIRRV-GSGEPGLVDGPAESAR 228

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
              P G+I A +G +F+ADT N+ +R +D+     E+ T+   G + P  K+ +P
Sbjct: 229 FQRPQGLI-AADGAIFVADTWNHAVRRIDVASG--EVTTIAGTGRRGPILKAPAP 280


>gi|427430403|ref|ZP_18920257.1| hypothetical protein C882_1420 [Caenispirillum salinarum AK4]
 gi|425878863|gb|EKV27574.1| hypothetical protein C882_1420 [Caenispirillum salinarum AK4]
          Length = 498

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 189/501 (37%), Positives = 274/501 (54%), Gaps = 33/501 (6%)

Query: 431 PEFPAK-LDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           PE   K L W NT  PL  +  L+G++V+LDFWTYCCINC+ VLP L  +E+ +      
Sbjct: 8   PEIDRKGLAWFNTPDPLSLK-SLRGRIVILDFWTYCCINCVQVLPTLRQIEEAFPHQ-VA 65

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVHS KF  E+  EA+ +A+ RYGI HPVV+D  M LW E  V +WPT  ++ P+GK+
Sbjct: 66  VIGVHSPKFAAERCPEAVEHAIRRYGIRHPVVHDPYMTLWDEYAVRAWPTLVLICPDGKV 125

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN----TP-LPLSLEKDNDPRLFTSPLKFP 603
           + QL+GE          + AL+  G   L+D     +P +P+ +           PL+FP
Sbjct: 126 IGQLSGE---------PDPALMIQGLSDLIDTLGGVSPRMPVEMPLSTPSAAGDGPLRFP 176

Query: 604 GKL-AIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           GK+  +     R  ++D  +++++V + DG  + + G +G  G  DG  + A F  PQGL
Sbjct: 177 GKVKPLAGAEGRWAVADGGNHQVLVCESDGRVLARYG-TGLPGTDDGQAERAAFTSPQGL 235

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A    ++ ++VADT NH +R ID  +  V T+AG   +G      +      L SPWD+ 
Sbjct: 236 A--CTEDAIFVADTGNHLVRRIDLCSGAVTTVAGLRFRGLPVSMRQPAAETALASPWDIE 293

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
             P    ++IA AG HQI   +   G     +G G E N++   + +   AQPSG++L+P
Sbjct: 294 ITPDGGTLFIANAGTHQILAMNMRAGTVEPLAGTGGE-NIHDGPATSALLAQPSGLALAP 352

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRL--LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
           D   +Y ADSE+S++R + L   G RL   A  + +    LF FG  DG  +   +QHPL
Sbjct: 353 DASALYFADSETSAVRKVILD--GWRLGQTARVETLVGRGLFDFGHDDGPMTAARMQHPL 410

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG--FKDGAALAAQLSEPAGII 898
           GV    +G++ VADSYNH I+ +D A+  V TL    K G     GAA    L EPAG+ 
Sbjct: 411 GVAVMPDGRVAVADSYNHAIRLIDEAAGTVETL----KTGRLHCTGAACRRPLWEPAGLW 466

Query: 899 EAQNGNLFIADTNNNIIRYLD 919
               G L ++DTNN+ I  +D
Sbjct: 467 PTPKGRLLVSDTNNHRIVEVD 487



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
           G+  VAD  NH++   + +  RV    G G  G  DG A  A  + P G+   ++  +F+
Sbjct: 187 GRWAVADGGNHQVLVCE-SDGRVLARYGTGLPGTDDGQAERAAFTSPQGLACTEDA-IFV 244

Query: 908 ADTNNNIIRYLDL-NKEEPELQTLELKGVQPPTPKS-RSPKRLRRRSSPDAQTIVVDGG- 964
           ADT N+++R +DL +     +  L  +G+    P S R P      +SP    I  DGG 
Sbjct: 245 ADTGNHLVRRIDLCSGAVTTVAGLRFRGL----PVSMRQPAAETALASPWDIEITPDGGT 300

Query: 965 --LSNEGN 970
             ++N G 
Sbjct: 301 LFIANAGT 308


>gi|357412450|ref|YP_004924186.1| alkyl hydroperoxide reductase [Streptomyces flavogriseus ATCC
           33331]
 gi|320009819|gb|ADW04669.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Streptomyces flavogriseus ATCC 33331]
          Length = 603

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 175/448 (39%), Positives = 257/448 (57%), Gaps = 26/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT   Q+   DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 10  PELIGKGGWLNTGDRQYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  VV P G ++
Sbjct: 69  IGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVVDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +  K  L     P        P    + L+FPGK A+ 
Sbjct: 129 AQHAGEGHAHAIEKLVEELETEHAAKGTLRRGDGPYVA-----PEPVATHLRFPGK-ALV 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +    +SDS  +R+V  + DG  +     +GE G  DG  ++A F+ PQGLA      
Sbjct: 183 LPDGGFLVSDSTRHRLVELEADGETVRGHFGTGERGFADGGREEARFSEPQGLAV-LPDG 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            + VADT NHA+R +D       TLAG G    +GS   G    T   L+SPWD+ +   
Sbjct: 242 RIAVADTVNHAIRALDLTTGVTTTLAGTGRQWWQGSATDG--PATEVDLSSPWDIAW--F 297

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
           +++++IAMAG HQ+W +    G     +G   E  ++G       FAQPSG++ + D   
Sbjct: 298 DDRLWIAMAGVHQLWTYDPGTGTVGVAAGTTNEGLVDGPGD-EAWFAQPSGLASAGD--R 354

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R ++L+ G  R   G        LF FG RDG   + LLQHPLGV    
Sbjct: 355 LWVADSENSALRYVDLE-GAVRTAVG------TGLFDFGHRDGPAGQALLQHPLGVTALP 407

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + V+DSYNH +++ DP S  V+TLA
Sbjct: 408 DGSVAVSDSYNHALRRYDPRSGEVTTLA 435



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+DS  H++ +L+     V    G G+ GF DG    A+ SEP 
Sbjct: 174 LRFPGKALVLPDGGFLVSDSTRHRLVELEADGETVRGHFGTGERGFADGGREEARFSEPQ 233

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLN 921
           G+    +G + +ADT N+ IR LDL 
Sbjct: 234 GLAVLPDGRIAVADTVNHAIRALDLT 259



 Score = 47.4 bits (111), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 822 FKFGDR---DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
           F  G+R   DG   E     P G+    +G+I VAD+ NH I+ LD  +   +TLAG G+
Sbjct: 212 FGTGERGFADGGREEARFSEPQGLAVLPDGRIAVADTVNHAIRALDLTTGVTTTLAGTGR 271

Query: 879 AGFK----DGAALAAQLSEPAGI 897
             ++    DG A    LS P  I
Sbjct: 272 QWWQGSATDGPATEVDLSSPWDI 294



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            +RL+++DS ++ +   DL+G     +G+   + G RDG    A    P G+      ++
Sbjct: 352 GDRLWVADSENSALRYVDLEGAVRTAVGTGLFDFGHRDGPAGQALLQHPLGVTALPDGSV 411

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             V+D+ NHALR  D  +  V TLA +  + SD
Sbjct: 412 A-VSDSYNHALRRYDPRSGEVTTLATDLREPSD 443


>gi|291452573|ref|ZP_06591963.1| NHL repeat containing protein [Streptomyces albus J1074]
 gi|291355522|gb|EFE82424.1| NHL repeat containing protein [Streptomyces albus J1074]
          Length = 613

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 172/449 (38%), Positives = 258/449 (57%), Gaps = 25/449 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT   +   +DL+GK+V+ DFWT+CC+NC+HVL +L  LE++++D    +
Sbjct: 10  PELVGKGGWLNTGGDELSLQDLRGKIVIADFWTFCCVNCLHVLDELRELEERHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E + +A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 69  VGVHSPKFVHEAEHQAVVDAVERYGVEHPVLDDPELVTWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +  K  L     P        P      L+FPG+ A+ 
Sbjct: 129 AQHAGEGHAHAIEKLVEELEAEHAAKGTLRRGDGPYVA-----PEPVAGALRFPGR-AVL 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIV-QIGSSGEEGLRDGSFDDATFNRPQGLAYNAKK 668
           + +    +SD+  +++V    DG  +V +IG  GE GL DG   +A F+ PQGLA   + 
Sbjct: 183 LPSGNFLVSDTTRHQLVELAEDGESVVRRIGGEGERGLADGGPAEARFSEPQGLALTPEG 242

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKP 725
           + + VADT NHALR ++  +  V T AG G    +GS   G  +     L+SPWDV +  
Sbjct: 243 DAVIVADTVNHALRRVELASGVVTTPAGTGRQWWQGSPTSGPAREVD--LSSPWDVAW-- 298

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
              K++IAMAG HQ+W +    G     +G   E  ++G  +    FAQPSG++   D  
Sbjct: 299 FGGKLWIAMAGTHQLWTYDPQAGTVAVAAGTTNEGLVDGPGA-EAWFAQPSGLAADGD-A 356

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
            ++VADSE+S++R ++ +     ++  G       LF FG RDG  ++ L QHPL V   
Sbjct: 357 RLWVADSETSALRWVDPEGTVHTVVGTG-------LFDFGHRDGEAAQALFQHPLAVTVL 409

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLA 874
            +G + V+D+YNH +++ DPAS  VSTLA
Sbjct: 410 PDGSVAVSDTYNHALRRYDPASGEVSTLA 438



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 9/185 (4%)

Query: 737 QHQIWEHSTVDG--VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
           +HQ+ E +  DG  V R   G+G ER L         F++P G++L+P+   + VAD+ +
Sbjct: 195 RHQLVELAE-DGESVVRRIGGEG-ERGLADGGPAEARFSEPQGLALTPEGDAVIVADTVN 252

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
            ++R + L +G     AG         ++     G   EV L  P  V     G++++A 
Sbjct: 253 HALRRVELASGVVTTPAGTG----RQWWQGSPTSGPAREVDLSSPWDV-AWFGGKLWIAM 307

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
           +  H++   DP +  V+  AG    G  DG    A  ++P+G+    +  L++AD+  + 
Sbjct: 308 AGTHQLWTYDPQAGTVAVAAGTTNEGLVDGPGAEAWFAQPSGLAADGDARLWVADSETSA 367

Query: 915 IRYLD 919
           +R++D
Sbjct: 368 LRWVD 372


>gi|424868210|ref|ZP_18291970.1| NHL repeat domain protein [Leptospirillum sp. Group II 'C75']
 gi|124516337|gb|EAY57845.1| NHL repeat domain protein [Leptospirillum rubarum]
 gi|387221511|gb|EIJ76065.1| NHL repeat domain protein [Leptospirillum sp. Group II 'C75']
          Length = 494

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 198/509 (38%), Positives = 282/509 (55%), Gaps = 36/509 (7%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PEFPA +DW+NT  PL     L+GKVV+LDFWT+CCINCMHVLPDL +LE+KY D   TV
Sbjct: 13  PEFPAGMDWMNTDRPLSLA-GLRGKVVLLDFWTFCCINCMHVLPDLAYLEEKYPDS-LTV 70

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKF NE +   I+ A+ RY I HPV+ND + ++W   G ++WPTFA++ P G L+
Sbjct: 71  IGVHSAKFSNEGESVQIQKAIERYAIRHPVINDREFDVWNAYGAHAWPTFALIDPEGYLV 130

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
              +GEG R  LD  +++ +  +  K  L     P     D      +S L+FP K  ID
Sbjct: 131 GMTSGEGKRAVLDQAIDSLVTHHRSKGTLSPFLPPPPPSPDR-----SSLLRFPAK--ID 183

Query: 610 ILNNRLFISDSNHNRIVVTDLDGN-----FIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           I   ++ +SDS ++R+++ D + +      + ++   G  G  DGSFD A F  PQG+ +
Sbjct: 184 ISGKKVLVSDSGNHRLLLLDWEEHSPEKAALREVIGQGTPGSADGSFDQAQFRDPQGIRF 243

Query: 665 NAKK-NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
                ++  VADT NH LR +DF   +V T+AG G +G          S +LNSPWD+ +
Sbjct: 244 CPDDPDIAIVADTGNHLLRRVDFRRGSVTTIAGTGVQGWAIFEPVPAMSAVLNSPWDILF 303

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
              +  +Y+A AG HQI             +G   E  ++G+     S AQPSG  L+ D
Sbjct: 304 HR-DGMLYVAQAGPHQIIRLDPERQEIFPVAGSAREDLVDGTGD-QASLAQPSG--LTSD 359

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              IY  DSE+SS+R L+   G S   +  + +    LF+FG+RDG   E  LQHPLG+ 
Sbjct: 360 GTRIYFVDSETSSVRVLH--PGVSPRQSRVETLVGRGLFEFGNRDGSFQEARLQHPLGIL 417

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
              +G + VAD+YNH+I+ LDP +  V +L   GK            L EP+ I +  +G
Sbjct: 418 W-DDGLLLVADTYNHRIRALDPDARVVLSLTE-GKG-----------LDEPSDIKKG-SG 463

Query: 904 NLFIADTNNNIIRYLDLNKEEPELQTLEL 932
              I +TN + I  L    E P L  +++
Sbjct: 464 AYLITNTNAHEIAVLLSTSEGPVLGKVDI 492


>gi|410477767|ref|YP_006765404.1| NHL repeat domain-containing protein [Leptospirillum ferriphilum
           ML-04]
 gi|406773019|gb|AFS52444.1| NHL repeat domain protein [Leptospirillum ferriphilum ML-04]
          Length = 494

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 198/509 (38%), Positives = 282/509 (55%), Gaps = 36/509 (7%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PEFPA +DW+NT  PL     L+GKVV+LDFWT+CCINCMHVLPDL +LE+KY D   TV
Sbjct: 13  PEFPAGMDWMNTDRPLSLA-GLRGKVVLLDFWTFCCINCMHVLPDLAYLEEKYPDS-LTV 70

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKF NE +   I+ A+ RY I HPV+ND + ++W   G ++WPTFA++ P G L+
Sbjct: 71  IGVHSAKFSNEGESVQIQKAIERYAIRHPVINDREFDVWNAYGAHAWPTFALIDPEGYLV 130

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
              +GEG R  LD  +++ +  +  K  L     P     D      +S L+FP K  ID
Sbjct: 131 GMTSGEGKRAVLDQAIDSLVTHHRSKGTLSPFLPPPPPSPDR-----SSLLRFPAK--ID 183

Query: 610 ILNNRLFISDSNHNRIVVTDLDGN-----FIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           I   ++ +SDS ++R+++ D + +      + ++   G  G  DGSFD A F  PQG+ +
Sbjct: 184 ISGKKVLVSDSGNHRLLLLDWEEHSPEKAALREVIGQGTPGSADGSFDQAQFRDPQGIRF 243

Query: 665 NAKK-NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
                ++  VADT NH LR +DF   +V T+AG G +G          S +LNSPWD+ +
Sbjct: 244 CPDDPDIAIVADTGNHLLRRVDFRRRSVTTIAGTGVQGWAIFEPVPAMSAVLNSPWDILF 303

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
              +  +Y+A AG HQI             +G   E  ++G+     S AQPSG  L+ D
Sbjct: 304 HR-DGMLYVAQAGPHQIIRLDPERQEIFPVAGSAREDLVDGTGD-QASLAQPSG--LTSD 359

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              IY  DSE+SS+R L+   G S   +  + +    LF+FG+RDG   E  LQHPLG+ 
Sbjct: 360 GTRIYFVDSETSSVRVLH--PGVSPRQSRVETLVGRGLFEFGNRDGSFQEARLQHPLGIL 417

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
              +G + VAD+YNH+I+ LDP +  V +L   GK            L EP+ I +  +G
Sbjct: 418 W-DDGLLLVADTYNHRIRALDPDARVVLSLTE-GKG-----------LDEPSDIKKG-SG 463

Query: 904 NLFIADTNNNIIRYLDLNKEEPELQTLEL 932
              I +TN + I  L    E P L  +++
Sbjct: 464 AYLITNTNAHEIAVLLSTSEGPVLGKVDI 492


>gi|21218701|ref|NP_624480.1| hypothetical protein SCO0142 [Streptomyces coelicolor A3(2)]
 gi|6066645|emb|CAB58305.1| conserved hypothetical protein SCJ33.06c [Streptomyces coelicolor
           A3(2)]
          Length = 601

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 177/448 (39%), Positives = 254/448 (56%), Gaps = 26/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  W+NT   +     L+G++VVLDFWT+CC+NC+H L +L  LE++++D    +
Sbjct: 10  PELVGRGGWINTGDRELSLAALRGRIVVLDFWTFCCVNCLHALDELRELEERHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E +  A+ +AV RY + HPV++D +   WR+  V +WPT AV+ P G ++
Sbjct: 69  VGVHSPKFTHEAEHRAVLDAVERYSVEHPVLDDPERVTWRQYAVRAWPTLAVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ  GEGH   +  LVE     +  K  L     P  +  + +P    + L+FPGK A+ 
Sbjct: 129 AQYTGEGHAHAIQRLVEELEARHAAKGTLRRGDAPY-VAPEPEP----TTLRFPGK-AVS 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +    +SD+  +++V    DG   V+   SG  G  DG  D A F+ PQGLA     +
Sbjct: 183 LPSGTFLVSDTTRHQLVELAEDGESPVRRIGSGRRGFTDGPADRAEFSEPQGLALLGDGS 242

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTK---GSDYQGGEKGTSQLLNSPWDVCYKPI 726
           ++ VADT NHALR  + V   V TLAG G +   G   +G  +  S  L+SPWDV     
Sbjct: 243 VV-VADTVNHALRRYEPVTGEVTTLAGTGRQHRPGEPSRGAARAVS--LSSPWDVAL--W 297

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
           N++V+IAMAG HQ+W +   DG     +G G E  ++G       FAQPSG+S + D   
Sbjct: 298 NDRVWIAMAGVHQLWAYDPRDGSVTVTAGTGNEGLVDGPGP-EAWFAQPSGLSATDD--R 354

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R + L  G  R   G        LF FG RDG  +  LLQHPLGV    
Sbjct: 355 LWVADSETSALRWVELD-GTVRTAVG------TGLFDFGHRDGPAARALLQHPLGVAALP 407

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + VAD+YNH +++  P +  VSTLA
Sbjct: 408 DGSVVVADTYNHALRRYAPPTGEVSTLA 435



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +L           G G+ GF DG A  A+ SEP 
Sbjct: 174 LRFPGKAVSLPSGTFLVSDTTRHQLVELAEDGESPVRRIGSGRRGFTDGPADRAEFSEPQ 233

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEP---ELQTLELKGVQP-PTPKSRSPKRLRRR 951
           G+    +G++ +ADT N+ +R     + EP   E+ TL   G Q  P   SR   R    
Sbjct: 234 GLALLGDGSVVVADTVNHALR-----RYEPVTGEVTTLAGTGRQHRPGEPSRGAARAVSL 288

Query: 952 SSP 954
           SSP
Sbjct: 289 SSP 291



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF- 881
           + G  DG         P G+    +G + VAD+ NH +++ +P +  V+TLAG G+    
Sbjct: 216 RRGFTDGPADRAEFSEPQGLALLGDGSVVVADTVNHALRRYEPVTGEVTTLAGTGRQHRP 275

Query: 882 ---KDGAALAAQLSEPAGIIEAQNGNLFIA 908
                GAA A  LS P  +    N  ++IA
Sbjct: 276 GEPSRGAARAVSLSSPWDVA-LWNDRVWIA 304



 Score = 43.1 bits (100), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
           ++RL+++DS  + +   +LDG     +G+   + G RDG    A    P G+A     ++
Sbjct: 352 DDRLWVADSETSALRWVELDGTVRTAVGTGLFDFGHRDGPAARALLQHPLGVAALPDGSV 411

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           + VADT NHALR        V TLA +  + SD
Sbjct: 412 V-VADTYNHALRRYAPPTGEVSTLATDLREPSD 443


>gi|206603181|gb|EDZ39661.1| NHL repeat domain protein [Leptospirillum sp. Group II '5-way CG']
          Length = 494

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 197/509 (38%), Positives = 281/509 (55%), Gaps = 36/509 (7%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PEFPA +DW+NT  PL     L+GKVV+LDFWT+CCINCMHVLPDL +LE+KY D   TV
Sbjct: 13  PEFPAGMDWMNTDRPLSLA-GLRGKVVLLDFWTFCCINCMHVLPDLAYLEEKYPD-SLTV 70

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHSAKF NE +   I+ A+ RY I HPV+ND + ++W   G ++WPTFA++ P G L+
Sbjct: 71  IGVHSAKFSNEGESVQIQKAIERYAIRHPVINDREFDIWNAYGAHAWPTFALIDPEGYLV 130

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
              +GEG R  LD  +++ +  +  K  L  +        D      +S L+FP K  ID
Sbjct: 131 GMTSGEGKRAVLDQAIDSLITHHRSKGTLSPSLPSSPPSPDR-----SSLLRFPAK--ID 183

Query: 610 ILNNRLFISDSNHNRIVVTDLDGN-----FIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           I   ++ +SDS ++R+++   + +      + ++   G  G  DGSFD A F  PQG+ +
Sbjct: 184 IAGKKVLVSDSGNHRLLLLAWEEHSPEKAALREVIGQGIPGSADGSFDQAQFRDPQGVRF 243

Query: 665 NAKK-NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
                +   VADT NH LR +DF   +V T+AG G +G          S +LNSPWD+ +
Sbjct: 244 CPDDPDTAIVADTGNHLLRRVDFRRRSVTTIAGTGVQGWAIFEPVSAMSAVLNSPWDILF 303

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
              +  +Y+A+AG HQI             +G   E  ++G+     S AQPSG  L+ D
Sbjct: 304 HR-DGMLYVALAGPHQIIRLDLDRQEIFPVAGSAREDLVDGTGD-QASLAQPSG--LTSD 359

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              IY  DSE+SS+R L+   G S   +  + +    LF+FG+RDG   E  LQHPLG+ 
Sbjct: 360 GNRIYFVDSETSSVRVLH--PGPSPWQSRIETLVGRGLFEFGNRDGSFQEARLQHPLGIL 417

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
              +G + VAD+YNH+I+ LDP S  V +L   GK            L EP+  I+  +G
Sbjct: 418 W-DDGLLLVADTYNHRIRALDPDSRVVLSLTE-GKG-----------LDEPSD-IKKGSG 463

Query: 904 NLFIADTNNNIIRYLDLNKEEPELQTLEL 932
              I +TN + I  L    E P L  +++
Sbjct: 464 AYLITNTNAHEIAVLISTSEGPILGKVDI 492


>gi|289774196|ref|ZP_06533574.1| NHL repeat containing protein [Streptomyces lividans TK24]
 gi|289704395|gb|EFD71824.1| NHL repeat containing protein [Streptomyces lividans TK24]
          Length = 605

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 177/448 (39%), Positives = 254/448 (56%), Gaps = 26/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  W+NT   +     L+G++VVLDFWT+CC+NC+H L +L  LE++++D    +
Sbjct: 14  PELVGRGGWINTGDRELSLAALRGRIVVLDFWTFCCVNCLHALDELRELEERHRDT-VVI 72

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E +  A+ +AV RY + HPV++D +   WR+  V +WPT AV+ P G ++
Sbjct: 73  VGVHSPKFTHEAEHRAVLDAVERYSVEHPVLDDPERVTWRQYAVRAWPTLAVIDPEGYVV 132

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ  GEGH   +  LVE     +  K  L     P  +  + +P    + L+FPGK A+ 
Sbjct: 133 AQYTGEGHAHAIQRLVEELEARHAAKGTLRRGDAPY-VAPEPEP----TTLRFPGK-AVS 186

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +    +SD+  +++V    DG   V+   SG  G  DG  D A F+ PQGLA     +
Sbjct: 187 LPSGTFLVSDTTRHQLVELAEDGESPVRRIGSGRRGFTDGPADRAEFSEPQGLALLGDGS 246

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTK---GSDYQGGEKGTSQLLNSPWDVCYKPI 726
           ++ VADT NHALR  + V   V TLAG G +   G   +G  +  S  L+SPWDV     
Sbjct: 247 VV-VADTVNHALRRYEPVTGEVTTLAGTGRQHRPGEPSRGAARAVS--LSSPWDVAL--W 301

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
           N++V+IAMAG HQ+W +   DG     +G G E  ++G       FAQPSG+S + D   
Sbjct: 302 NDRVWIAMAGVHQLWAYDPRDGSVTVTAGTGNEGLVDGPGP-EAWFAQPSGLSATDD--R 358

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R + L  G  R   G        LF FG RDG  +  LLQHPLGV    
Sbjct: 359 LWVADSETSALRWVELD-GTVRTAVG------TGLFDFGHRDGPAARALLQHPLGVAALP 411

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + VAD+YNH +++  P +  VSTLA
Sbjct: 412 DGSVVVADTYNHALRRYAPPTGEVSTLA 439



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +L           G G+ GF DG A  A+ SEP 
Sbjct: 178 LRFPGKAVSLPSGTFLVSDTTRHQLVELAEDGESPVRRIGSGRRGFTDGPADRAEFSEPQ 237

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEP---ELQTLELKGVQP-PTPKSRSPKRLRRR 951
           G+    +G++ +ADT N+ +R     + EP   E+ TL   G Q  P   SR   R    
Sbjct: 238 GLALLGDGSVVVADTVNHALR-----RYEPVTGEVTTLAGTGRQHRPGEPSRGAARAVSL 292

Query: 952 SSP 954
           SSP
Sbjct: 293 SSP 295



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF- 881
           + G  DG         P G+    +G + VAD+ NH +++ +P +  V+TLAG G+    
Sbjct: 220 RRGFTDGPADRAEFSEPQGLALLGDGSVVVADTVNHALRRYEPVTGEVTTLAGTGRQHRP 279

Query: 882 ---KDGAALAAQLSEPAGIIEAQNGNLFIA 908
                GAA A  LS P  +    N  ++IA
Sbjct: 280 GEPSRGAARAVSLSSPWDVA-LWNDRVWIA 308



 Score = 43.1 bits (100), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
           ++RL+++DS  + +   +LDG     +G+   + G RDG    A    P G+A     ++
Sbjct: 356 DDRLWVADSETSALRWVELDGTVRTAVGTGLFDFGHRDGPAARALLQHPLGVAALPDGSV 415

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           + VADT NHALR        V TLA +  + SD
Sbjct: 416 V-VADTYNHALRRYAPPTGEVSTLATDLREPSD 447


>gi|328717168|ref|XP_001944227.2| PREDICTED: NHL repeat-containing protein 2-like [Acyrthosiphon pisum]
          Length = 943

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 256/827 (30%), Positives = 371/827 (44%), Gaps = 187/827 (22%)

Query: 430  VPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPF 487
            V EF   LDW N T PL F +DLKGK+V+LDF+TYCC+NC+H+LP L  L++++  +   
Sbjct: 75   VNEFKPNLDWFNCTKPLLFNKDLKGKLVLLDFFTYCCVNCLHILPVLHSLQQRFTCEDGL 134

Query: 488  TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
             ++GVHSAKF NE+    + +A+ +Y I H VVND D  +W +L V  WPT  ++GPNG+
Sbjct: 135  VIIGVHSAKFPNEQQSVNVHHAIEKYSIEHCVVNDTDGTMWNDLAVCCWPTLVLIGPNGE 194

Query: 548  LLAQLAGEG-HRKDLDDLVEAALLFYGKKKLLDNTPLP---------LSLEKDNDPRLFT 597
             +  + GE  H + L   +E AL    +  ++ +  +P          SL       +  
Sbjct: 195  PMLVVQGEEFHSQLLPTFIETALQILRQASMISSHNIPEIVPGRTTLQSLATSKQSSVTK 254

Query: 598  SPLKFPGK------------------LAIDILNNR------LFISDSNHNRIVVTDLDGN 633
              L +PGK                  L    LNNR      + I+DS H+RIV++ + G 
Sbjct: 255  QHLLYPGKVFAYTKKLKKRKNNGNETLNSSNLNNRHHGKILVAIADSGHHRIVISTIQGR 314

Query: 634  FIVQIGSSG--------EEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
                IG  G        ++G +DG+F +A F+ PQG+ +    ++L+V DTENHA+R ID
Sbjct: 315  VKHVIGGGGTGLFSSTTKKGFKDGNFTEALFHSPQGICFQ-NSHILFVCDTENHAIRMID 373

Query: 686  FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK---------------- 729
                TV+T+AGNG KG D  GG+   +Q+LN+PWDV Y     +                
Sbjct: 374  LKEKTVKTVAGNGKKGHDKYGGQMWNAQILNTPWDVVYYKRKARPQYQQQYTPQPYTPNQ 433

Query: 730  --------------------VYIAMAGQHQIW-------EHSTVD---------GVTRAF 753
                                + IAMAG HQIW         ST           G+    
Sbjct: 434  NYQQLQQSTTSGPTPSPVRCLLIAMAGLHQIWALYLDKTSTSTCSSMKSKWCSKGLCTMV 493

Query: 754  SGDGYERNLNGS-SSLNTSFAQPSGISLSPDFMEI-----------YVADSESSSIRALN 801
            +G G E N N S +    SFAQPSG+ L+     I           Y+ADSESSS+R + 
Sbjct: 494  AGTGKEENRNNSYNGQRASFAQPSGLCLTKPSSRIGSVSNGCDPSLYIADSESSSVRRMY 553

Query: 802  LKTGGS-RLL--AGGDPIFPDNLFKFGDRD-GMGSEVLLQHPLGV-YCAKNGQIYVADSY 856
            L + G  R+L  AGG P  P +LF +GD D G G+   LQHP+ V +  K   +YVADSY
Sbjct: 554  LDSMGKYRVLNVAGGSPD-PTDLFSYGDIDGGAGANSRLQHPMDVAWNHKRNILYVADSY 612

Query: 857  NHKIKKLDPASNR--------------VSTLAGIGKAGFKDGAALAAQLSEPAG---IIE 899
            NHKIK +   S+                  + G    G      L  +L+EP G   I  
Sbjct: 613  NHKIKYVTGLSDSHKQNHYNNGGGNTTTGGIPG-STGGSVHTLPLPVKLNEPNGLHFIEN 671

Query: 900  AQNGN--LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKS---RSPKRLRRRSSP 954
             Q+G+  L IADTNN+ +   + +    +   LE   +   +P +    +  RL RR+  
Sbjct: 672  PQDGSSLLLIADTNNHSVWVYNFDTYVIKKLQLEFPKILESSPSNVVGTAQIRLNRRTGG 731

Query: 955  D----AQTIV-------VDGGLSNEGNIYLKISLPEEYHFSKEARSKFSV---------- 993
                  + I+       V   L ++ ++   + LP+    SKE +S  S+          
Sbjct: 732  QLMLRGRVILGSSSGTEVSQTLEDQPHLNWTLQLPDSTWESKEIKSNTSISAVVGAAADF 791

Query: 994  -------------DVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGR--------- 1031
                         D   ENA  I   DGN          F   S   S            
Sbjct: 792  KYLIRIPKQEWEEDKNDENADDITSRDGNKRWNDKYNQDFENESDEDSEDESDDEEEIVI 851

Query: 1032 ISCKVYYCKEDEVCLYKPLLFE----VPFQEEVPNSPPAEITLPYDL 1074
            + C+   C++D+ C+  P+ F+    V + +E      A+   PY L
Sbjct: 852  LRCQTSVCQDDDKCV--PVEFDFVVRVRYGDEENTPQAADTYFPYTL 896


>gi|302543897|ref|ZP_07296239.1| putative NHL repeat protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302461515|gb|EFL24608.1| putative NHL repeat protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 608

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 177/450 (39%), Positives = 254/450 (56%), Gaps = 27/450 (6%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE      WLNT        DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 10  PELTGLGGWLNTGGKDLTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E + +A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 69  VGVHSPKFVHEAEHQAVVDAVERYGVHHPVLDDPELTTWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LV      +  K  L     P        P    + L+FPGK A+ 
Sbjct: 129 AQHAGEGHAHAIETLVGQLETEHAAKGTLRRGDGPYV-----PPEPVPTELRFPGK-ALL 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           +      +SD+  +++V    DG  +++   +GE GL DG  D A F+ PQGLA      
Sbjct: 183 LPGGTFLVSDTTRHQLVELAADGESVLRRIGTGERGLADGRADRARFSEPQGLA-ALPDG 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            + VADT NHALR  D     V TLAG G    +GS  +G  +     L+SPWD+ +   
Sbjct: 242 TVAVADTVNHALRRFDPATGEVTTLAGTGRQWWQGSPAEGPARDID--LSSPWDLAW--F 297

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
           +  ++IAMAG HQ+W +    G  RA +G   E  ++G +     F+QPSG++ S D   
Sbjct: 298 DGLLWIAMAGVHQLWTYDLQAGTVRAAAGTTNEGLVDGPAD-QAWFSQPSGLAASGD--R 354

Query: 787 IYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
           ++VADSESS++R +     G   R   G        LF FG RDG   + LLQHPLGV  
Sbjct: 355 LWVADSESSAVRWVERDGDGFAVRTAVG------TGLFDFGHRDGAADQALLQHPLGVTA 408

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
             +G + VAD+YNH +++ DPA+  VSTLA
Sbjct: 409 LPDGSVAVADTYNHALRRYDPATGEVSTLA 438



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 7/165 (4%)

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
           ER L    +    F++P G++  PD   + VAD+ + ++R  +  TG    LAG      
Sbjct: 216 ERGLADGRADRARFSEPQGLAALPDGT-VAVADTVNHALRRFDPATGEVTTLAGTG---- 270

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
              ++    +G   ++ L  P  +    +G +++A +  H++   D  +  V   AG   
Sbjct: 271 RQWWQGSPAEGPARDIDLSSPWDL-AWFDGLLWIAMAGVHQLWTYDLQAGTVRAAAGTTN 329

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
            G  DG A  A  S+P+G+  A    L++AD+ ++ +R+++ + +
Sbjct: 330 EGLVDGPADQAWFSQPSGLA-ASGDRLWVADSESSAVRWVERDGD 373



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P        G   V+D+  H++ +L      V    G G+ G  DG A  A+ SEP 
Sbjct: 174 LRFPGKALLLPGGTFLVSDTTRHQLVELAADGESVLRRIGTGERGLADGRADRARFSEPQ 233

Query: 896 GIIEAQNGNLFIADTNNNIIRYLD 919
           G+    +G + +ADT N+ +R  D
Sbjct: 234 GLAALPDGTVAVADTVNHALRRFD 257



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 612 NNRLFISDSNHN--RIVVTDLDGNFIVQIGSSG--EEGLRDGSFDDATFNRPQGLAYNAK 667
            +RL+++DS  +  R V  D DG  +     +G  + G RDG+ D A    P G+     
Sbjct: 352 GDRLWVADSESSAVRWVERDGDGFAVRTAVGTGLFDFGHRDGAADQALLQHPLGVTALPD 411

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            ++  VADT NHALR  D     V TLA +  + SD
Sbjct: 412 GSV-AVADTYNHALRRYDPATGEVSTLATDLREPSD 446


>gi|357391051|ref|YP_004905892.1| hypothetical protein KSE_41500 [Kitasatospora setae KM-6054]
 gi|311897528|dbj|BAJ29936.1| hypothetical protein KSE_41500 [Kitasatospora setae KM-6054]
          Length = 608

 Score =  306 bits (784), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 178/458 (38%), Positives = 255/458 (55%), Gaps = 38/458 (8%)

Query: 431 PEFPAKLDWLNTAPLQFRR-DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT        D +GK+V+ DFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 10  PELVGKGGWLNTGGKDLSLVDFRGKIVIADFWTFCCVNCLHVLDELRELEEKHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E D  A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 69  VGVHSPKFVHEADHRAVVDAVARYEVHHPVLDDPELVTWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGK 605
           AQ AGEGH   +  LVE     +  K          +L + + P +   P    L+FPGK
Sbjct: 129 AQHAGEGHAHAIAKLVEELEAEHAAKG---------TLRRGDGPYVAPEPAAGDLRFPGK 179

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY- 664
            A+ + +    ++DS H+ +V  D DG  +++    G  GL DG   +  F+ PQGLA  
Sbjct: 180 -AVLLPDGHYLVADSGHHALVELDADGETVLRRIGDGVRGLVDGP--EPRFSEPQGLALV 236

Query: 665 --NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LN 716
                  L Y   VADT NHALR +   + +V TLAG G +   +QG       L   L+
Sbjct: 237 PAGLAPELGYDVVVADTVNHALRGVRLADGSVTTLAGTGKQW--WQGSPTAGPALGVDLS 294

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SPWDV +   + +V+IAMAG HQ+W    V G  R  +G   E  ++G       FAQPS
Sbjct: 295 SPWDVAF--FDGEVWIAMAGVHQLWAFDPVAGTVRVAAGTTNEGLVDGPPG-EAWFAQPS 351

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           G+++S D   ++VADSE+S++R ++  T   R   G        LF FG RDG   + LL
Sbjct: 352 GLAVSADGERLWVADSETSALRWVSRGTHEVRTAVG------TGLFDFGHRDGAAGQALL 405

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           QHPLGV    +G + V+D+YN  +++ DPA+  VSTLA
Sbjct: 406 QHPLGVTVLPDGSVAVSDTYNQALRRYDPAAGEVSTLA 443


>gi|443625938|ref|ZP_21110373.1| putative NHL repeat protein [Streptomyces viridochromogenes Tue57]
 gi|443340614|gb|ELS54821.1| putative NHL repeat protein [Streptomyces viridochromogenes Tue57]
          Length = 632

 Score =  306 bits (783), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 176/457 (38%), Positives = 256/457 (56%), Gaps = 30/457 (6%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNTA   +   DL+G++V+LDFWT+CCINC+HVL +L  LE K+
Sbjct: 11  RRVRVRAPELIGKGGWLNTAGRPYGLADLRGRIVILDFWTFCCINCLHVLDELRELEDKH 70

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVHS KF +E D  A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+
Sbjct: 71  RDT-VVVIGVHSPKFAHEADHRAVADAVERYGVEHPVLDDPELATWKQYAVRAWPTLVVI 129

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP--- 599
            P G ++AQ AGEGH   ++ LV      +  K          +L + + P +   P   
Sbjct: 130 DPEGYVVAQHAGEGHVHAIERLVGELEAEHEAKG---------TLRRGDGPYVAPEPEPT 180

Query: 600 -LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNR 658
            L+FPGK+ + + +    +SD+  +++V    DG  +V+    G  G  DG  D A F  
Sbjct: 181 VLRFPGKVLL-LPSGDFLVSDTTRHQLVELAGDGETVVRRIGQGSRGSTDGYADRARFQE 239

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNS 717
           PQGLA       + VADT NH +R  D       TLAG G +    Q     G    L+S
Sbjct: 240 PQGLAL-LPDGTVAVADTVNHLVRRFDPETGRTTTLAGTGIQWMQGQATSGPGRDVSLSS 298

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           PWDV +   N +++IAMAG HQ+W +   DG     +G   E  ++G +     FAQPSG
Sbjct: 299 PWDVAW--WNGRLWIAMAGVHQLWAYDPADGTVSVTAGTTNEGLVDGPAP-EAWFAQPSG 355

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           ++ +P+   +++ADSE+S++R ++L   G+   A G       LF FG RDG   E LLQ
Sbjct: 356 LAATPE--RLWLADSETSALRWIDLD--GTVHTAVG-----TGLFDFGHRDGRAEEALLQ 406

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           HPLGV    +G I V+D+YNH +++ DPA+  V+TLA
Sbjct: 407 HPLGVTALPDGSIAVSDTYNHALRRYDPATGEVTTLA 443



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 7/150 (4%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F +P G++L PD   + VAD+ +  +R  + +TG +  LAG    +     +     G G
Sbjct: 237 FQEPQGLALLPDGT-VAVADTVNHLVRRFDPETGRTTTLAGTGIQW----MQGQATSGPG 291

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
            +V L  P  V    NG++++A +  H++   DPA   VS  AG    G  DG A  A  
Sbjct: 292 RDVSLSSPWDV-AWWNGRLWIAMAGVHQLWAYDPADGTVSVTAGTTNEGLVDGPAPEAWF 350

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++P+G+  A    L++AD+  + +R++DL+
Sbjct: 351 AQPSGLA-ATPERLWLADSETSALRWIDLD 379



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG----KAG 880
           G  DG       Q P G+    +G + VAD+ NH +++ DP + R +TLAG G    +  
Sbjct: 226 GSTDGYADRARFQEPQGLALLPDGTVAVADTVNHLVRRFDPETGRTTTLAGTGIQWMQGQ 285

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIA 908
              G      LS P  +    NG L+IA
Sbjct: 286 ATSGPGRDVSLSSPWDVA-WWNGRLWIA 312



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSE 893
            +L+ P  V    +G   V+D+  H++ +L      V    G G  G  DG A  A+  E
Sbjct: 180 TVLRFPGKVLLLPSGDFLVSDTTRHQLVELAGDGETVVRRIGQGSRGSTDGYADRARFQE 239

Query: 894 PAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           P G+    +G + +ADT N+++R  D   E     TL   G+Q
Sbjct: 240 PQGLALLPDGTVAVADTVNHLVRRFD--PETGRTTTLAGTGIQ 280



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 21/252 (8%)

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           V+DT  H L E+    +TV    G G++GS     ++   Q    P  +   P +  V +
Sbjct: 198 VSDTTRHQLVELAGDGETVVRRIGQGSRGSTDGYADRARFQ---EPQGLALLP-DGTVAV 253

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS---LNTSFAQPSGISLSPDFMEIYV 789
           A    H +       G T   +G G +     ++S    + S + P  ++       +++
Sbjct: 254 ADTVNHLVRRFDPETGRTTTLAGTGIQWMQGQATSGPGRDVSLSSPWDVAWW--NGRLWI 311

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           A +    + A +   G   + AG            G  DG   E     P G+  A   +
Sbjct: 312 AMAGVHQLWAYDPADGTVSVTAG--------TTNEGLVDGPAPEAWFAQPSGL-AATPER 362

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
           +++ADS    ++ +D     V T  G G    G +DG A  A L  P G+    +G++ +
Sbjct: 363 LWLADSETSALRWID-LDGTVHTAVGTGLFDFGHRDGRAEEALLQHPLGVTALPDGSIAV 421

Query: 908 ADTNNNIIRYLD 919
           +DT N+ +R  D
Sbjct: 422 SDTYNHALRRYD 433



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
            RL+++DS  + +   DLDG     +G+   + G RDG  ++A    P G+      ++ 
Sbjct: 361 ERLWLADSETSALRWIDLDGTVHTAVGTGLFDFGHRDGRAEEALLQHPLGVTALPDGSI- 419

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            V+DT NHALR  D     V TLA +  + SD
Sbjct: 420 AVSDTYNHALRRYDPATGEVTTLATDLREPSD 451


>gi|345008031|ref|YP_004810385.1| redoxin domain-containing protein [Streptomyces violaceusniger Tu
           4113]
 gi|344034380|gb|AEM80105.1| Redoxin domain protein [Streptomyces violaceusniger Tu 4113]
          Length = 615

 Score =  306 bits (783), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 184/502 (36%), Positives = 277/502 (55%), Gaps = 48/502 (9%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT        DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 21  PELIGRGGWLNTGGNDLTLTDLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 79

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 80  VGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 139

Query: 550 AQLAGEGHRKDLDDLV---EAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKL 606
           AQ AGEGH   L+ LV   EA     G  +  D   +P        P    + L+FPGK 
Sbjct: 140 AQHAGEGHAHALETLVGQLEAEHAAKGTLRRGDGPYVP--------PEPVPTELRFPGK- 190

Query: 607 AIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA 666
           A+ +      +SD+  +++V    DG  +V+   +GE GL DG+ + A F+ PQGLA   
Sbjct: 191 ALLLPGGTFLVSDTTRHQLVELAADGESVVRRIGAGERGLTDGTGERARFSEPQGLAL-L 249

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCY 723
               + VADT NHALR  D     V TLAG G    +GS  +G  +     L+SPWDV +
Sbjct: 250 PDGTVAVADTVNHALRRFDPATGEVTTLAGTGRQWWQGSPTEGPAREVD--LSSPWDVAW 307

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
                +++IAMAG HQ+W +       RA +G   E  ++G +     FAQPSG++ + D
Sbjct: 308 --FAGRLWIAMAGVHQLWTYDPEAQAVRAAAGTTNEGLVDGPAE-EAWFAQPSGLAATED 364

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              +++ADSE+S++R +     G   R   G        LF FG RDG   + LLQHPLG
Sbjct: 365 --RLWIADSETSALRYVERDGDGFAVRTAVG------TGLFDFGHRDGAAEQALLQHPLG 416

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           V    +G + ++D+YNH +++ DPA+  VST              LA  L EP+G + A 
Sbjct: 417 VTALPDGSVAISDTYNHALRRYDPATGEVST--------------LATDLREPSGAVLA- 461

Query: 902 NGNLFIADTNNNIIRYLDLNKE 923
           +G++ + ++  + +  L L +E
Sbjct: 462 DGDVVVVESARHRLTRLRLPEE 483


>gi|386841352|ref|YP_006246410.1| hypothetical protein SHJG_5269 [Streptomyces hygroscopicus subsp.
           jinggangensis 5008]
 gi|374101653|gb|AEY90537.1| hypothetical protein SHJG_5269 [Streptomyces hygroscopicus subsp.
           jinggangensis 5008]
 gi|451794647|gb|AGF64696.1| hypothetical protein SHJGH_5033 [Streptomyces hygroscopicus subsp.
           jinggangensis TL01]
          Length = 611

 Score =  305 bits (782), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 176/465 (37%), Positives = 264/465 (56%), Gaps = 34/465 (7%)

Query: 418 ISDVENRKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           ++D   R+     PE   K  WLNT   Q+   DL+G++VVLDFWT+CCINC+HVL +L 
Sbjct: 1   MTDSAPRRARVRAPELTGKGGWLNTGDQQYTLADLRGRIVVLDFWTFCCINCLHVLDELR 60

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
            LE+K++D    V+GVHS KF +E + +A+ +AV RY ++HPV++D ++  W++  V +W
Sbjct: 61  ELEEKHRDT-LVVIGVHSPKFAHEAEHQAVVDAVERYDVAHPVLDDPELATWKQYAVRAW 119

Query: 537 PTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF 596
           PT  V+ P G ++AQ AGEGH   ++ LV      +  K          +L + + P + 
Sbjct: 120 PTLVVIDPEGYVVAQHAGEGHVHAIERLVTELEAEHEAKG---------TLRRGDGPYVA 170

Query: 597 TSP----LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
             P    L+FPGK A+ + +    +SD+  +++V    D   +V+   SG  G  DG   
Sbjct: 171 PEPEPTALRFPGK-ALLLPSGTFLVSDTTRHQLVELAEDAETVVRRIGSGTRGFADGGPR 229

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEK 709
           +A+F+ PQGLA     +++ VADT NHALR +D     V TLAG G    +GS   G  +
Sbjct: 230 EASFSEPQGLALLDDGSVV-VADTVNHALRRLDPATGEVTTLAGTGKQWWQGSATSGPAR 288

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLN 769
                L+SPWDV       KV+IAMAG HQ+W +   +      +G   E  ++G ++  
Sbjct: 289 EVD--LSSPWDVAV--FGGKVWIAMAGVHQLWTYDPAERTVAVAAGTTNEGLVDGPAA-E 343

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
             FAQPSG++ + D   +++ADSE+S++R + L       +  G       LF FG RDG
Sbjct: 344 AWFAQPSGLAATAD--RLWLADSETSALRWVGLDGQVHTAVGTG-------LFDFGHRDG 394

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
              + LLQHPLGV    +G + VAD+YNH +++ DPA+  V+TLA
Sbjct: 395 AADQALLQHPLGVTALPDGSVAVADTYNHALRRYDPATGEVTTLA 439



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 16/174 (9%)

Query: 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
           TR F+ DG  R          SF++P G++L  D   + VAD+ + ++R L+  TG    
Sbjct: 220 TRGFA-DGGPRE--------ASFSEPQGLALLDDG-SVVVADTVNHALRRLDPATGEVTT 269

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR 869
           LAG         ++     G   EV L  P  V     G++++A +  H++   DPA   
Sbjct: 270 LAGTG----KQWWQGSATSGPAREVDLSSPWDV-AVFGGKVWIAMAGVHQLWTYDPAERT 324

Query: 870 VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           V+  AG    G  DG A  A  ++P+G+  A    L++AD+  + +R++ L+ +
Sbjct: 325 VAVAAGTTNEGLVDGPAAEAWFAQPSGLA-ATADRLWLADSETSALRWVGLDGQ 377



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +L   +  V    G G  GF DG    A  SEP 
Sbjct: 178 LRFPGKALLLPSGTFLVSDTTRHQLVELAEDAETVVRRIGSGTRGFADGGPREASFSEPQ 237

Query: 896 GIIEAQNGNLFIADTNNNIIRYLD 919
           G+    +G++ +ADT N+ +R LD
Sbjct: 238 GLALLDDGSVVVADTVNHALRRLD 261



 Score = 46.2 bits (108), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           +RL+++DS  + +    LDG     +G+   + G RDG+ D A    P G+      ++ 
Sbjct: 357 DRLWLADSETSALRWVGLDGQVHTAVGTGLFDFGHRDGAADQALLQHPLGVTALPDGSV- 415

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            VADT NHALR  D     V TLA +  + SD
Sbjct: 416 AVADTYNHALRRYDPATGEVTTLATDLREPSD 447


>gi|429202583|ref|ZP_19193964.1| antioxidant, AhpC/TSA family [Streptomyces ipomoeae 91-03]
 gi|428661888|gb|EKX61363.1| antioxidant, AhpC/TSA family [Streptomyces ipomoeae 91-03]
          Length = 619

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/455 (39%), Positives = 257/455 (56%), Gaps = 26/455 (5%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT   Q+   DL+GK+VVLDFWT+CCINC+HVL +L  LE+K+
Sbjct: 12  RRVRVRAPELIGKGGWLNTGGKQYSLADLRGKIVVLDFWTFCCINCLHVLDELRHLEEKH 71

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVHS KF +E +  A+ +AV RY + HPV++D ++  W++  V +WPT  V+
Sbjct: 72  RDT-VVVIGVHSPKFAHEAEHRAVLDAVERYEVEHPVLDDPELATWKQYAVRAWPTLVVI 130

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   ++ LV      +  K  L     P  +  + DP +    L+F
Sbjct: 131 DPEGYVVAQHAGEGHVHAIERLVTELETEHAAKGTLRRGDGPY-VPPEPDPTV----LRF 185

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK A+ + +    +SD+  +R+V    DG  +V+   +GE G  DG  D A F+ PQGL
Sbjct: 186 PGK-ALLLPDGDFLVSDTTRHRLVRLAPDGETVVRRYGTGERGFVDGPADHARFSEPQGL 244

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPW 719
           A     +++ VADT NHALR +D     V TLAG G +   +QG           L+SPW
Sbjct: 245 ALLDSGDVV-VADTVNHALRRLDPDTGHVATLAGTGRQW--WQGSPTSGPAWQIDLSSPW 301

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV       KV+IAMAG HQ+W +   D      +G   E  ++G       FAQPSG++
Sbjct: 302 DVAV--FGGKVWIAMAGVHQLWTYDPADCTVAVAAGTTNEGLVDGPGP-EAWFAQPSGLA 358

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
            + D   +++ADSE+S++R ++L       +  G       LF FG RDG   + LLQHP
Sbjct: 359 ATAD--RLWLADSETSALRWVDLDGVVHTAVGTG-------LFDFGHRDGDAEQALLQHP 409

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           LGV    +G + + D+YNH +++ DPA+  V+TLA
Sbjct: 410 LGVTALPDGSVAICDTYNHALRRYDPATGEVTTLA 444



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 7/163 (4%)

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
           ER      + +  F++P G++L  D  ++ VAD+ + ++R L+  TG    LAG      
Sbjct: 225 ERGFVDGPADHARFSEPQGLALL-DSGDVVVADTVNHALRRLDPDTGHVATLAGTG---- 279

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
              ++     G   ++ L  P  V     G++++A +  H++   DPA   V+  AG   
Sbjct: 280 RQWWQGSPTSGPAWQIDLSSPWDV-AVFGGKVWIAMAGVHQLWTYDPADCTVAVAAGTTN 338

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            G  DG    A  ++P+G + A    L++AD+  + +R++DL+
Sbjct: 339 EGLVDGPGPEAWFAQPSG-LAATADRLWLADSETSALRWVDLD 380



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%)

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           +L+ P       +G   V+D+  H++ +L P    V    G G+ GF DG A  A+ SEP
Sbjct: 182 VLRFPGKALLLPDGDFLVSDTTRHRLVRLAPDGETVVRRYGTGERGFVDGPADHARFSEP 241

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLD 919
            G+    +G++ +ADT N+ +R LD
Sbjct: 242 QGLALLDSGDVVVADTVNHALRRLD 266



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           +RL+++DS  + +   DLDG     +G+   + G RDG  + A    P G+      ++ 
Sbjct: 362 DRLWLADSETSALRWVDLDGVVHTAVGTGLFDFGHRDGDAEQALLQHPLGVTALPDGSVA 421

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            + DT NHALR  D     V TLA +  + SD
Sbjct: 422 -ICDTYNHALRRYDPATGEVTTLATDLREPSD 452


>gi|395768739|ref|ZP_10449254.1| hypothetical protein Saci8_03116 [Streptomyces acidiscabies 84-104]
          Length = 596

 Score =  304 bits (779), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 173/452 (38%), Positives = 257/452 (56%), Gaps = 35/452 (7%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT   Q+   DL+G++V+LDFWT+CCINC+HVL +L  LE+K+ D    V
Sbjct: 6   PELVGKGGWLNTGDRQYTLSDLRGRIVILDFWTFCCINCLHVLDELRELEEKHADT-VVV 64

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 65  IGVHSPKFVHEAEHQAVVDAVERYGVEHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 124

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGK 605
           AQ  GEGH   ++ LV      +G K          +L + + P +   P    L+FPGK
Sbjct: 125 AQHGGEGHVHAIERLVTELEAEHGAKG---------TLRRGDGPYVAPEPEPTALRFPGK 175

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
            A+ + +    +SD+  +++V    DG  +V+   +G  G  DG+  +A F+ PQGLA  
Sbjct: 176 -ALLLPSGNFLVSDTTRHQLVELAQDGESVVRRIGTGTRGFADGTA-EAAFSEPQGLAL- 232

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVC 722
                + VADT NHALR +D     V TLAG G    +GS   G  +     L+SPWDV 
Sbjct: 233 LDDGAVVVADTVNHALRRVDLATGDVTTLAGTGRQWWQGSPTSGPAREID--LSSPWDVA 290

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                 KV+IAMAG HQ+W +  V G     +G   E  ++G  +    FAQPSG++ + 
Sbjct: 291 L--FGGKVWIAMAGVHQLWAYDPVAGTVAVAAGTTNEGLVDGPGA-QAWFAQPSGLAAAG 347

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
           D   +++ADSE+S++R ++        +  G       LF FG RDG   + LLQHPLGV
Sbjct: 348 D--RLWLADSETSALRWVDADGNVHTAVGTG-------LFDFGHRDGAADQALLQHPLGV 398

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
               +G + ++D+YNH +++ DPA+  V+TLA
Sbjct: 399 TALPDGSVAISDTYNHALRRYDPATGEVTTLA 430



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 55/201 (27%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-------GDPIF------ 817
           +F++P G++L  D   + VAD+ + ++R ++L TG    LAG       G P        
Sbjct: 223 AFSEPQGLALLDDGA-VVVADTVNHALRRVDLATGDVTTLAGTGRQWWQGSPTSGPAREI 281

Query: 818 ----PDNLFKFGDR---------------------------------DGMGSEVLLQHPL 840
               P ++  FG +                                 DG G++     P 
Sbjct: 282 DLSSPWDVALFGGKVWIAMAGVHQLWAYDPVAGTVAVAAGTTNEGLVDGPGAQAWFAQPS 341

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSEPAGII 898
           G+  A + ++++ADS    ++ +D A   V T  G G    G +DGAA  A L  P G+ 
Sbjct: 342 GLAAAGD-RLWLADSETSALRWVD-ADGNVHTAVGTGLFDFGHRDGAADQALLQHPLGVT 399

Query: 899 EAQNGNLFIADTNNNIIRYLD 919
              +G++ I+DT N+ +R  D
Sbjct: 400 ALPDGSVAISDTYNHALRRYD 420



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +L      V    G G  GF DG A AA  SEP 
Sbjct: 170 LRFPGKALLLPSGNFLVSDTTRHQLVELAQDGESVVRRIGTGTRGFADGTAEAA-FSEPQ 228

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
           G+    +G + +ADT N+ +R +DL
Sbjct: 229 GLALLDDGAVVVADTVNHALRRVDL 253



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            +RL+++DS  + +   D DGN    +G+   + G RDG+ D A    P G+      ++
Sbjct: 347 GDRLWLADSETSALRWVDADGNVHTAVGTGLFDFGHRDGAADQALLQHPLGVTALPDGSV 406

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             ++DT NHALR  D     V TLA +  + SD
Sbjct: 407 -AISDTYNHALRRYDPATGEVTTLATDLREPSD 438



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK----DGAAL 887
           +E     P G+    +G + VAD+ NH ++++D A+  V+TLAG G+  ++     G A 
Sbjct: 220 AEAAFSEPQGLALLDDGAVVVADTVNHALRRVDLATGDVTTLAGTGRQWWQGSPTSGPAR 279

Query: 888 AAQLSEP 894
              LS P
Sbjct: 280 EIDLSSP 286


>gi|330464985|ref|YP_004402728.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal
           allergen [Verrucosispora maris AB-18-032]
 gi|328807956|gb|AEB42128.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal
           allergen [Verrucosispora maris AB-18-032]
          Length = 611

 Score =  304 bits (779), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 177/489 (36%), Positives = 269/489 (55%), Gaps = 41/489 (8%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   +    DL+GK+V+ DFWT+CCINC+HVL +L  LE+KY D+   V+GVHS KF
Sbjct: 15  WLNTGGRELTLADLRGKIVIADFWTFCCINCLHVLDELRPLEEKYADV-LVVIGVHSPKF 73

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++EKD  A+ +AV RYG+ HPV++D ++++W++    +WPT AV+ P G ++A +AGEGH
Sbjct: 74  EHEKDPVALADAVERYGVHHPVLDDPELDMWQQYAARAWPTLAVIDPEGYVVATMAGEGH 133

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
            + L  L++  +  +  K  L     P        P    + L+FPGKL +   +  L +
Sbjct: 134 AEGLARLIDDLVATHEAKGTLHRGDGPYV-----PPAEPQTTLRFPGKLVVGP-DGTLLV 187

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY------NAKKNLL 671
           SDS  +R+V    DG  +++   +G  G  DG+ D ATF+ PQGL              L
Sbjct: 188 SDSARHRVVELAADGETLLRAIGTGSRGRVDGTADTATFSEPQGLCLLPPHVAEVAGYDL 247

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGT--KGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            VADT NH LR +   +  V T+AG G   + +         S  L+SPWD+ +   ++K
Sbjct: 248 VVADTVNHLLRGVRLGSGEVVTVAGTGRQWRSTVDDHAHDALSVDLSSPWDLAW--YDDK 305

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           V IAMAG HQ+W    +      ++G   E   +G  +  T  AQPSG+++S D   ++V
Sbjct: 306 VVIAMAGIHQLWWFDPIKRTAGMYAGTTVEALRDGPLA-ETWLAQPSGLAVSADGRRLWV 364

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           ADSESS+IR +     G+ +  G        LF FG  DG  ++ LLQHPLGV    +G 
Sbjct: 365 ADSESSAIRYVEDDVMGTAVGQG--------LFDFGHVDGPAAQALLQHPLGVCALPDGS 416

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           + +AD+YN  +++ DPA++ VST              +A  L+EP+ +    +G + + +
Sbjct: 417 VLIADTYNGAVRRYDPATDEVST--------------VATDLAEPSDLALTPDGAVLVVE 462

Query: 910 TNNNIIRYL 918
           +  + I  L
Sbjct: 463 SAGHRITRL 471


>gi|408828763|ref|ZP_11213653.1| hypothetical protein SsomD4_16351 [Streptomyces somaliensis DSM
           40738]
          Length = 614

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 171/447 (38%), Positives = 253/447 (56%), Gaps = 26/447 (5%)

Query: 432 EFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           E   K  W+NT     +  D +G+  +LDFWT+CCINC+HVL +L  LE++++D    ++
Sbjct: 23  ELIGKGGWINTGGKDLKLADFRGRTTILDFWTFCCINCLHVLDELRELEERHRDT-VVII 81

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF +E D +A+ +AV RYG+ HPV++D D+  W++  V +WPT  V+ P G ++A
Sbjct: 82  GVHSPKFVHEADHQAVVDAVERYGVEHPVLDDPDLATWKQYAVRAWPTLVVIDPEGYVVA 141

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
           Q AGEGH K +  LV      +G K  L     P        P    + L+FPGK A+ +
Sbjct: 142 QHAGEGHAKAIGTLVAELEAEHGAKGTLRRGDGPYV-----PPEPTATHLRFPGK-ALAL 195

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            +  L +SD+  +R+V    DG  +V+    G  GL DG  + A F+ PQG+       +
Sbjct: 196 ESGNLLVSDTTRHRLVEVAPDGETVVRRYGDGRRGLVDGPAESARFSEPQGMCALPDGRI 255

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           + VADT NHALR +D     V TLAG G    +GS   G  +  +  L+SPWDV +    
Sbjct: 256 V-VADTVNHALRALDPETGAVSTLAGTGAQWMQGSPTSGPAREVA--LSSPWDVAW--WR 310

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +V+IAMAG HQ+W +   DG     +G   E  ++G ++    FAQPSG++ + D   +
Sbjct: 311 GRVWIAMAGVHQLWAYDPEDGTVEVAAGTTNEGLVDGPAA-EAWFAQPSGLAAAGD--RL 367

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           +VADSE+S++R ++ +      +  G       LF FG RDG   + L QHPLGV    +
Sbjct: 368 WVADSETSALRWVDAEGLVHTAVGTG-------LFDFGHRDGAADQALFQHPLGVTALPD 420

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLA 874
           G + V D+YNH +++ DPA+  V+TLA
Sbjct: 421 GSVAVCDTYNHALRRYDPAAGEVTTLA 447



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 9/171 (5%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V R + GDG  R L    + +  F++P G+   PD   I VAD+ + ++RAL+ +TG   
Sbjct: 220 VVRRY-GDG-RRGLVDGPAESARFSEPQGMCALPD-GRIVVADTVNHALRALDPETGAVS 276

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
            LAG    +     +     G   EV L  P  V   + G++++A +  H++   DP   
Sbjct: 277 TLAGTGAQW----MQGSPTSGPAREVALSSPWDVAWWR-GRVWIAMAGVHQLWAYDPEDG 331

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            V   AG    G  DG A  A  ++P+G+  A +  L++AD+  + +R++D
Sbjct: 332 TVEVAAGTTNEGLVDGPAAEAWFAQPSGLAAAGD-RLWVADSETSALRWVD 381



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P      ++G + V+D+  H++ ++ P    V    G G+ G  DG A +A+ SEP 
Sbjct: 186 LRFPGKALALESGNLLVSDTTRHRLVEVAPDGETVVRRYGDGRRGLVDGPAESARFSEPQ 245

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           G+    +G + +ADT N+ +R LD   E   + TL   G Q
Sbjct: 246 GMCALPDGRIVVADTVNHALRALD--PETGAVSTLAGTGAQ 284



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 23/272 (8%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           AT  R  G A   +   L V+DT  H L E+    +TV    G+G +G      E   S 
Sbjct: 183 ATHLRFPGKALALESGNLLVSDTTRHRLVEVAPDGETVVRRYGDGRRGLVDGPAE---SA 239

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
             + P  +C  P + ++ +A    H +       G     +G G +  + GS +  +  A
Sbjct: 240 RFSEPQGMCALP-DGRIVVADTVNHALRALDPETGAVSTLAGTGAQW-MQGSPT--SGPA 295

Query: 774 QPSGISLSPDFM----EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
           +   +S   D       +++A +    + A + + G   + AG            G  DG
Sbjct: 296 REVALSSPWDVAWWRGRVWIAMAGVHQLWAYDPEDGTVEVAAG--------TTNEGLVDG 347

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAAL 887
             +E     P G+  A + +++VADS    ++ +D A   V T  G G    G +DGAA 
Sbjct: 348 PAAEAWFAQPSGLAAAGD-RLWVADSETSALRWVD-AEGLVHTAVGTGLFDFGHRDGAAD 405

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            A    P G+    +G++ + DT N+ +R  D
Sbjct: 406 QALFQHPLGVTALPDGSVAVCDTYNHALRRYD 437



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            +RL+++DS  + +   D +G     +G+   + G RDG+ D A F  P G+      ++
Sbjct: 364 GDRLWVADSETSALRWVDAEGLVHTAVGTGLFDFGHRDGAADQALFQHPLGVTALPDGSV 423

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             V DT NHALR  D     V TLA +  + SD
Sbjct: 424 A-VCDTYNHALRRYDPAAGEVTTLATDLREPSD 455


>gi|407780651|ref|ZP_11127872.1| NHL repeat-containing protein [Oceanibaculum indicum P24]
 gi|407208878|gb|EKE78785.1| NHL repeat-containing protein [Oceanibaculum indicum P24]
          Length = 498

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 188/492 (38%), Positives = 270/492 (54%), Gaps = 30/492 (6%)

Query: 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           L W N        DL+GK+++LDFWT+CCINC+H+LP L+ LE+ + +    V+GVHS K
Sbjct: 16  LAWFNVPQPLSLADLRGKLLILDFWTFCCINCLHILPTLKRLEQAFPE-DVAVIGVHSPK 74

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F  E++ EA+R+A+ R+GI+HPVV+D D  LW+E  V +WPT   V P+G ++ Q +GE 
Sbjct: 75  FAAEREPEAVRHAIARHGIAHPVVHDPDFLLWQEYAVRAWPTLIFVSPDGYVIGQHSGEP 134

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKL-----AIDIL 611
             + L ++VE  L  Y +K  +   P PL LE +   R+ ++  +FPGK+     A D  
Sbjct: 135 DAERLQEVVEKTLKDYRRKGTM--RPRPLDLEPE---RMPSARFRFPGKIKPLPEAPDSP 189

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
                ++DS H++IV+ D +G  +++ G SGE G   G  D A F  PQGLA  A    +
Sbjct: 190 GKLWILADSGHHQIVILDDEGRELMRFG-SGEAGFASGPADRARFRDPQGLA--ADTGAI 246

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           YVADT NHA+R ID     V TLAGNG +G   Q         L SPWD+        +Y
Sbjct: 247 YVADTGNHAIRRIDRQTGQVTTLAGNGRRGYVLQSAVPFADAELASPWDLALS--GGTLY 304

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
            A AG HQ+             +G G E N+    +   + AQPSG++LSPD   +Y AD
Sbjct: 305 FANAGTHQLGYIDFARAEVVRLAGSGGE-NITDGPAAEATLAQPSGLALSPDGGTLYFAD 363

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV----YCAKN 847
           SE+SS+RA+     G  +    + +    LF+FG  +G  +   LQH LG+         
Sbjct: 364 SETSSVRAVRSTPEGPVV----ETLVGQGLFEFGHVNGDYASARLQHCLGLDWWEEAGPE 419

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
           G + VADSYN+ ++ +D A   V  L      GF    +L   L+E AGI    +G L +
Sbjct: 420 GGLLVADSYNNALRVVDFADRTVRDL----DDGFLCEDSLCLPLAELAGIAADGSGRLLV 475

Query: 908 ADTNNN-IIRYL 918
           +DTNN+ ++ YL
Sbjct: 476 SDTNNHRVLEYL 487



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 26/224 (11%)

Query: 724 KPINE------KVYI-AMAGQHQIWEHSTVDGVTRAFS--GDGYERNLNGSSSLNTSFAQ 774
           KP+ E      K++I A +G HQI     +D   R     G G E       +    F  
Sbjct: 180 KPLPEAPDSPGKLWILADSGHHQI---VILDDEGRELMRFGSG-EAGFASGPADRARFRD 235

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDP--IFPDNLFKFGDRDGMGS 832
           P G  L+ D   IYVAD+ + +IR ++ +TG    LAG         +   F D +    
Sbjct: 236 PQG--LAADTGAIYVADTGNHAIRRIDRQTGQVTTLAGNGRRGYVLQSAVPFADAE---- 289

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
              L  P  +  +  G +Y A++  H++  +D A   V  LAG G     DG A  A L+
Sbjct: 290 ---LASPWDLALS-GGTLYFANAGTHQLGYIDFARAEVVRLAGSGGENITDGPAAEATLA 345

Query: 893 EPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           +P+G+ +    G L+ AD+  + +R +    E P ++TL  +G+
Sbjct: 346 QPSGLALSPDGGTLYFADSETSSVRAVRSTPEGPVVETLVGQGL 389


>gi|144899324|emb|CAM76188.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 477

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 191/499 (38%), Positives = 277/499 (55%), Gaps = 46/499 (9%)

Query: 431 PEFPAK-LDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           PE  A  L W N   PL   + L+GK+V+LDFWT+CC+NC H LP L+ LE ++ +    
Sbjct: 8   PELAATGLTWFNVDQPLSLAQ-LRGKLVILDFWTFCCVNCFHTLPVLKDLENRFAN-ELV 65

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVHS KFD+E+D   +  A+ RY I+HPVV+D D+ LW    V +WPT  ++ P+G++
Sbjct: 66  VIGVHSPKFDHERDPAMVACAIARYDITHPVVHDPDLYLWENYCVRAWPTLVLISPDGRV 125

Query: 549 LAQLAGEGH----RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
           + QLAGE H     + ++D++E    F+   K+    P P   +  +DP      L+FPG
Sbjct: 126 IGQLAGEPHPDLLPQGIEDMIER---FFAMGKM---RPAPTPCQPVSDP---GGRLRFPG 176

Query: 605 KLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           K+     +    ++DS H+++V+ D  G  I + G SG  G  DG   DA+FN P+G+A 
Sbjct: 177 KIKRGA-DGVWALADSGHHQVVLLDDHGGEIARFG-SGLAGRDDGI--DASFNGPEGVAI 232

Query: 665 NAKKNLLYVADTENHALREIDFVN--DTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           +  +  +YVADT NH +R ID  +  D     A     G+   GG +G    L SPWD+ 
Sbjct: 233 D--RAFIYVADTRNHLIRRIDRQSGGDRHHRRAQGWRGGTLGPGGARGWETALASPWDME 290

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               +  +Y A AG HQ+       G+ R  +G G E NL    +  +  AQPSG++LS 
Sbjct: 291 VH--DGSLYFANAGSHQLGALDLDTGMIRMLAGSGGE-NLGDGEAGQSLLAQPSGLALSD 347

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
           D   +Y AD+E+S++R + L TG    L G        LF FG ++G  ++  LQHPLGV
Sbjct: 348 DGGSLYFADAETSALRRVCLSTGRVDTLVG------QGLFDFGHKNGPLAQARLQHPLGV 401

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
            CA NG++++ADSYNH I+ +DP S +VS L             L   +SEPAGI     
Sbjct: 402 SCA-NGRLFIADSYNHAIRVVDPVSGQVSDL-----------GHLPLDISEPAGIATDGA 449

Query: 903 GNLFIADTNNNIIRYLDLN 921
             L ++DTNN+ I  +DL 
Sbjct: 450 NRLLVSDTNNHRIIEVDLQ 468



 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 58/136 (42%), Gaps = 32/136 (23%)

Query: 561 LDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDS 620
           +D LV   L  +G K    N PL              + L+ P  L +   N RLFI+DS
Sbjct: 372 VDTLVGQGLFDFGHK----NGPLA------------QARLQHP--LGVSCANGRLFIADS 413

Query: 621 -NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679
            NH   VV  + G    Q+   G   L          + P G+A +    LL V+DT NH
Sbjct: 414 YNHAIRVVDPVSG----QVSDLGHLPL--------DISEPAGIATDGANRLL-VSDTNNH 460

Query: 680 ALREIDFVNDTVRTLA 695
            + E+D   +TVR  A
Sbjct: 461 RIIEVDLQANTVRAWA 476


>gi|425734502|ref|ZP_18852820.1| NHL repeat-containing protein [Brevibacterium casei S18]
 gi|425481116|gb|EKU48277.1| NHL repeat-containing protein [Brevibacterium casei S18]
          Length = 666

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 180/457 (39%), Positives = 253/457 (55%), Gaps = 37/457 (8%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           W+N+   +    DL+GKVV+LDFWT+CCINC+HVL +L  LE+KY      ++GVHS KF
Sbjct: 41  WMNSGGKELTLADLRGKVVLLDFWTFCCINCLHVLDELRPLEEKYAGE-LVIIGVHSPKF 99

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           + E+ +EA+  AV RY + H V++D D+  W+     +WPT AV+ P G L+A L+GEGH
Sbjct: 100 EFERTVEAVDQAVERYQVEHLVLDDPDLVTWQAYTARAWPTLAVIDPEGYLVATLSGEGH 159

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
              L +++E  +  +  K  L +   P       +  LF     +PGK+ + + +  L +
Sbjct: 160 GAGLGEIIEGLIEEHSAKGTLHSGDGPYVPPPAPETELF-----YPGKVTV-LPSGNLLV 213

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG-------LAYNAKKNL 670
           +DS H+ +V    DG  +++   +GE GL DG F  A F+ P G       +A  A   L
Sbjct: 214 ADSGHHSLVEYTPDGQTVLRRIGTGERGLTDGDFASAQFSEPGGITVLPEDIAARAGYQL 273

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNG----------TKGSDYQGGEKGTSQL---LNS 717
           + VADT NH LR ID   +TVRT+AG G           +G+    G      L   L+S
Sbjct: 274 V-VADTVNHVLRGIDLDGETVRTIAGTGEQHMVGAIDNVRGTHGALGRYSGPALDVKLSS 332

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           PWDV + P   +V +AMAG H IW    V G  R  SG   E  +NG +  +  FAQ SG
Sbjct: 333 PWDVLFVPATGEVVVAMAGNHTIWSFDPVTGDIRLLSGTMNEGLVNGDAE-SAWFAQSSG 391

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           + L PD   + VADSE+S+IR L+  +G +  L G        LF FG RDG  +E  LQ
Sbjct: 392 LDLHPD-GGVIVADSETSAIRRLDPASGEATTLVG------TGLFDFGFRDGPAAEARLQ 444

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           HPLGV    +G + +AD+YN  I++ D  +N VSTLA
Sbjct: 445 HPLGVRTLPDGSLAIADTYNGAIRRYDFTTNEVSTLA 481


>gi|126179662|ref|YP_001047627.1| NHL repeat-containing protein [Methanoculleus marisnigri JR1]
 gi|125862456|gb|ABN57645.1| NHL repeat containing protein [Methanoculleus marisnigri JR1]
          Length = 487

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 185/495 (37%), Positives = 268/495 (54%), Gaps = 24/495 (4%)

Query: 427 TPIV-PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           TPI  P+FP  L+WLN   PL  R DL G+VV+L F T+ C NCM + PD+  LE++Y +
Sbjct: 2   TPIAAPDFPPGLEWLNIDRPLSVR-DLSGRVVLLSFATFTCSNCMRLAPDIRRLEERYPE 60

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
           +   VV VH   F++       R AV R G+ HPV  D +  LW+  G+  WPTF ++ P
Sbjct: 61  L--VVVEVHYPGFESAAVGGNFREAVRRAGLEHPVAIDRNRLLWQTFGIRDWPTFVLIDP 118

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
            G ++ +  GEG    L+  ++     +G++ +L+   L      +       + L  PG
Sbjct: 119 EGNMVGKTGGEGLYGRLNPKIDRLTTEFGQRGMLEKGRLSPGTAPET---ARETSLYRPG 175

Query: 605 KLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
           K+A D    RLFISD+ H+RIVV   DG  +  IGS G  G  DG FD+A F  P+GLA+
Sbjct: 176 KVAADNAGMRLFISDTGHHRIVVAGGDGKILETIGS-GAAGNADGPFDEAAFYLPEGLAF 234

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYK 724
           + +  +LYVADT NH +R + F    V T AG G     +  G  GT   LN+P D+   
Sbjct: 235 DEEAGILYVADTGNHTIRRVSFTERRVATNAGTGLAAPSFGEGGPGTGTALNAPRDLAL- 293

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
            +   +YIAMAG +QIW           ++G G E  ++G+     +FA P+GI    D 
Sbjct: 294 -LGGHLYIAMAGANQIWRMDLATYEVEPYAGSGREGLVDGALD-KAAFAGPTGIVT--DG 349

Query: 785 MEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
             ++VADS +S+IR   +K G      G  P        FGD D +     +  P G+  
Sbjct: 350 EALFVADSGASAIR--RIKRGMVETRIGHSPE------DFGDLDTIARMARIHRPTGI-A 400

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN 904
            ++G +Y+AD+ NHKIK+ DP +  V T AG G  G++DG +  A+L+EP G+++   G 
Sbjct: 401 YRDGSLYIADTGNHKIKQFDPETGWVLTRAGDGDRGYRDGLSGEARLNEPGGLVDF-GGL 459

Query: 905 LFIADTNNNIIRYLD 919
            +IADT N+I+R  D
Sbjct: 460 WYIADTGNHIVRVYD 474



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 607 AIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA 666
            I   +  L+I+D+ +++I   D +  +++     G+ G RDG   +A  N P GL    
Sbjct: 398 GIAYRDGSLYIADTGNHKIKQFDPETGWVLTRAGDGDRGYRDGLSGEARLNEPGGLVDFG 457

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLA 695
              L Y+ADT NH +R  D V   V TLA
Sbjct: 458 --GLWYIADTGNHIVRVYDPVRHIVSTLA 484


>gi|329935738|ref|ZP_08285543.1| hypothetical protein SGM_1035 [Streptomyces griseoaurantiacus M045]
 gi|329304829|gb|EGG48702.1| hypothetical protein SGM_1035 [Streptomyces griseoaurantiacus M045]
          Length = 617

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 174/452 (38%), Positives = 259/452 (57%), Gaps = 34/452 (7%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT        DL+GK VV+DFWT+CCINC+HVL +L  LE+K++D    +
Sbjct: 23  PELIGKGGWLNTGGKDLTLADLRGKCVVVDFWTFCCINCLHVLDELRELEEKHRDT-VVI 81

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RYG+ HPV++D ++  W++  V +WPT  V+ P G ++
Sbjct: 82  IGVHSPKFVHEAEHQAVVDAVERYGVEHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVV 141

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGK 605
           AQ AGEGH   ++ LVE     +  K          +L + + P +   P    L+FPGK
Sbjct: 142 AQHAGEGHAHAIEKLVEELEAEHEAKG---------TLRRGDGPYVAPEPEPTTLRFPGK 192

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
            A+ + +  L +SD+  +++V    DG   V+   SG  G  DG+ + A F+ PQGLA  
Sbjct: 193 -ALLLPSGNLLVSDTTRHQLVELAADGESEVRRIGSGARGFADGTAEAAAFSEPQGLALL 251

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVC 722
              +++ VADT NHALR +D     V TLAG G    +GS   G  +     L+SPWDV 
Sbjct: 252 EDGSVV-VADTVNHALRRLDVATGGVTTLAGTGRQWWQGSPTSGPAREVD--LSSPWDVA 308

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                 +V++AMAG HQ+W +          +G   E  ++G  +    FAQPSG++ + 
Sbjct: 309 V--FGGRVWMAMAGVHQLWTYDPASETVEVAAGTTNEGLVDGPGA-EAWFAQPSGLAAAG 365

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
           +   +++ADSE+S++R ++  T G+   A G       LF FG RDG   + LLQHPLGV
Sbjct: 366 E--RLWLADSETSALRWVD--TEGAVHTAVG-----TGLFDFGHRDGAAEQALLQHPLGV 416

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
               +G + V+D+YNH +++ DPA+  V+TLA
Sbjct: 417 TALPDGSVAVSDTYNHALRRFDPATGEVTTLA 448



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 7/160 (4%)

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
           R     ++   +F++P G++L  D   + VAD+ + ++R L++ TGG   LAG       
Sbjct: 230 RGFADGTAEAAAFSEPQGLALLEDG-SVVVADTVNHALRRLDVATGGVTTLAGTG----R 284

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
             ++     G   EV L  P  V     G++++A +  H++   DPAS  V   AG    
Sbjct: 285 QWWQGSPTSGPAREVDLSSPWDV-AVFGGRVWMAMAGVHQLWTYDPASETVEVAAGTTNE 343

Query: 880 GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           G  DG    A  ++P+G+  A    L++AD+  + +R++D
Sbjct: 344 GLVDGPGAEAWFAQPSGLAAAGE-RLWLADSETSALRWVD 382



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G + V+D+  H++ +L           G G  GF DG A AA  SEP 
Sbjct: 187 LRFPGKALLLPSGNLLVSDTTRHQLVELAADGESEVRRIGSGARGFADGTAEAAAFSEPQ 246

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
           G+   ++G++ +ADT N+ +R LD+
Sbjct: 247 GLALLEDGSVVVADTVNHALRRLDV 271



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
             RL+++DS  + +   D +G     +G+   + G RDG+ + A    P G+      ++
Sbjct: 365 GERLWLADSETSALRWVDTEGAVHTAVGTGLFDFGHRDGAAEQALLQHPLGVTALPDGSV 424

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             V+DT NHALR  D     V TLA +  + SD
Sbjct: 425 -AVSDTYNHALRRFDPATGEVTTLATDLREPSD 456


>gi|345000781|ref|YP_004803635.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Streptomyces sp. SirexAA-E]
 gi|344316407|gb|AEN11095.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Streptomyces sp. SirexAA-E]
          Length = 608

 Score =  300 bits (767), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 173/448 (38%), Positives = 254/448 (56%), Gaps = 26/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT    +   DL+G++V+LDFWT+CC+NC+HVL +L  LE+K++D    +
Sbjct: 15  PELIGKGGWLNTGDRSYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEEKHRDT-VVI 73

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  VV P G ++
Sbjct: 74  IGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVVDPEGYVV 133

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +  K  L     P        P    + L+FPGK A+ 
Sbjct: 134 AQHAGEGHAHAIEKLVEELEAEHAAKGTLRRGDGPYVA-----PEPVATHLRFPGK-ALA 187

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +    +SD+  +R+V  D DG  +     +GE GL DG   +A F+ PQGLA      
Sbjct: 188 LADGGFLVSDTTRHRLVELDADGETVRGHFGTGERGLTDGGPGEARFSEPQGLAL-LPDG 246

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPWDVCYKPI 726
            + VADT NHA+R +D       TLAG G +   +QG           L+SPWDV +   
Sbjct: 247 RIAVADTVNHAIRALDLTTGATTTLAGTGRQW--WQGSATSGPAAEVDLSSPWDVAW--F 302

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            ++++IAMAG HQ+W +   DG  R  +G   E  ++G       FAQPSG++ + D   
Sbjct: 303 GDRLWIAMAGVHQLWTYDPEDGTVRVAAGTTNEGLVDGPGP-EAWFAQPSGLAATDD--R 359

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VADSE+S++R ++L       +  G       LF FG RDG   + L QHPLGV    
Sbjct: 360 LWVADSETSALRYVDLDGAVHTAVGTG-------LFDFGHRDGAADQALFQHPLGVTALP 412

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + V+D+YNH +++ DP S RV+TLA
Sbjct: 413 DGSVAVSDTYNHALRRFDPESGRVTTLA 440



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 9/176 (5%)

Query: 747 DGVT-RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           DG T R   G G ER L         F++P G++L PD   I VAD+ + +IRAL+L TG
Sbjct: 209 DGETVRGHFGTG-ERGLTDGGPGEARFSEPQGLALLPD-GRIAVADTVNHAIRALDLTTG 266

Query: 806 GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
            +  LA          ++     G  +EV L  P  V    + ++++A +  H++   DP
Sbjct: 267 ATTTLA----GTGRQWWQGSATSGPAAEVDLSSPWDVAWFGD-RLWIAMAGVHQLWTYDP 321

Query: 866 ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
               V   AG    G  DG    A  ++P+G+  A +  L++AD+  + +RY+DL+
Sbjct: 322 EDGTVRVAAGTTNEGLVDGPGPEAWFAQPSGLA-ATDDRLWVADSETSALRYVDLD 376



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +LD     V    G G+ G  DG    A+ SEP 
Sbjct: 179 LRFPGKALALADGGFLVSDTTRHRLVELDADGETVRGHFGTGERGLTDGGPGEARFSEPQ 238

Query: 896 GIIEAQNGNLFIADTNNNIIRYLD 919
           G+    +G + +ADT N+ IR LD
Sbjct: 239 GLALLPDGRIAVADTVNHAIRALD 262



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
           ++RL+++DS  + +   DLDG     +G+   + G RDG+ D A F  P G+      ++
Sbjct: 357 DDRLWVADSETSALRYVDLDGAVHTAVGTGLFDFGHRDGAADQALFQHPLGVTALPDGSV 416

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             V+DT NHALR  D  +  V TLA +  + SD
Sbjct: 417 A-VSDTYNHALRRFDPESGRVTTLATDLREPSD 448


>gi|398784412|ref|ZP_10547676.1| redoxin domain-containing protein [Streptomyces auratus AGR0001]
 gi|396995335|gb|EJJ06353.1| redoxin domain-containing protein [Streptomyces auratus AGR0001]
          Length = 602

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 168/448 (37%), Positives = 254/448 (56%), Gaps = 26/448 (5%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   K  WLNT        DL+G++VVLDFWT+CC+NC+HVL +L  LE++++D    +
Sbjct: 10  PELIGKGGWLNTGNKDLTLSDLRGRIVVLDFWTFCCVNCLHVLDELRALEERHRDT-VVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E + +A+ +AV RYG+ HPV++D +   W++  V +WPT  V+ P G ++
Sbjct: 69  VGVHSPKFVHEAEHQAVVDAVERYGVEHPVLDDPEFATWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   ++ LVE     +  K  L     P        P    + L+FPGK A+ 
Sbjct: 129 AQHAGEGHAHAIEKLVEELAAEHAAKGTLRRGDGPYV-----PPEPVATDLRFPGK-AVR 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + +    +SD+  +++V    DG  +++   SGE GL   S     FN PQGLA      
Sbjct: 183 LPHGSFLVSDTTRHQLVELAADGEQVLRRIGSGERGLTPDS-----FNEPQGLAL-LPDG 236

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            + VADT NHA+R  D  +  + T+AG GT   +GS   G  +  +  L+SPWD+ +   
Sbjct: 237 TVAVADTVNHAIRVFDPESGALETVAGTGTQWWQGSPTSGPAREVA--LSSPWDLAW--W 292

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            ++++IAMAG HQ+W +    G     +G   E  ++G ++    FAQPSG++ + +   
Sbjct: 293 QDRLWIAMAGVHQLWTYDPATGTVEVAAGTTNEGLVDGPAA-EAWFAQPSGLAAAGE--R 349

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           +++ADSE+S++R +     G   +          LF FG RDG   + LLQHPLGV    
Sbjct: 350 LWLADSETSAVRWVEPDGTGDGYVV--RTAVGTGLFDFGHRDGAAGQALLQHPLGVTALP 407

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + +AD+YNH +++ DPAS  V+TLA
Sbjct: 408 DGSVAIADTYNHALRRFDPASGEVTTLA 435



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 58/205 (28%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-------GDPIF------ 817
           SF +P G++L PD   + VAD+ + +IR  + ++G    +AG       G P        
Sbjct: 223 SFNEPQGLALLPDGT-VAVADTVNHAIRVFDPESGALETVAGTGTQWWQGSPTSGPAREV 281

Query: 818 ----PDNLFKFGDR---------------------------------DGMGSEVLLQHPL 840
               P +L  + DR                                 DG  +E     P 
Sbjct: 282 ALSSPWDLAWWQDRLWIAMAGVHQLWTYDPATGTVEVAAGTTNEGLVDGPAAEAWFAQPS 341

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASN------RVSTLAGIGKAGFKDGAALAAQLSEP 894
           G+  A   ++++ADS    ++ ++P         R +   G+   G +DGAA  A L  P
Sbjct: 342 GLAAAGE-RLWLADSETSAVRWVEPDGTGDGYVVRTAVGTGLFDFGHRDGAAGQALLQHP 400

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLD 919
            G+    +G++ IADT N+ +R  D
Sbjct: 401 LGVTALPDGSVAIADTYNHALRRFD 425


>gi|187778661|ref|ZP_02995134.1| hypothetical protein CLOSPO_02256 [Clostridium sporogenes ATCC
           15579]
 gi|187772286|gb|EDU36088.1| NHL repeat protein [Clostridium sporogenes ATCC 15579]
          Length = 467

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 185/493 (37%), Positives = 278/493 (56%), Gaps = 45/493 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++W+        + LK +V+VLDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPMTIEWIGAKKTNLDK-LKNRVIVLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGISHPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGISHPVVNDKNKSIWDSYTVNAWPTFVLIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLL-DNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            ++GEG+R+ LD ++   + ++       +N  L    EK+           +P K++I+
Sbjct: 134 MVSGEGNRELLDQIIGDTIEYFDNIHWSEENIVLQKKCEKE--------EYIYPSKISIN 185

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
             N  +  S+   NRIV+ D +   I  IGSS E GL+DG F +A F  P+GL +   +N
Sbjct: 186 -ENGLIAFSEKGRNRIVILDQNLEKIKTIGSS-EYGLKDGDFKEAQFKAPEGLRF--IEN 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWDVCYKPIN 727
            +YVADTENH++RE D   + V+T+AGNG K  +Y    KG +    LNSPWD+  + + 
Sbjct: 242 KIYVADTENHSIRECDLEKEMVKTIAGNGQK--EYSPMAKGDALNVSLNSPWDL--EILE 297

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +        +
Sbjct: 298 DCIYIAMAGNHQIWKYNMKDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KRL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG + G     +LQHPL +   K+
Sbjct: 356 YFVDSETSSIRYADLEEHKVHTLIG------KGLFYFGSKVGSFENTMLQHPLDLK-YKD 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  + +V  +    K G          L+EP GI   ++  +++
Sbjct: 409 NVLYIADTYNNRIIKADILNEKVEII----KKG----------LNEPNGIAIYEDS-IYM 453

Query: 908 ADTNNNIIRYLDL 920
            +TNN  I  +++
Sbjct: 454 CNTNNGKIEKINM 466



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 22/220 (10%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IENKIYVADTENHSIRECDLEKEMVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILED 298

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+K     S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMKDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   ++V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKRLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGSKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
            ++  L+IADT NN I   D+  E+ E+     KG+  P 
Sbjct: 406 YKDNVLYIADTYNNRIIKADILNEKVEIIK---KGLNEPN 442



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+ SIR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHSIRECDLEKEMVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   ++  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILEDC-IYIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKRLYFVDSETSSIRYADL--EEHKVHTLIGKGL 383


>gi|148380724|ref|YP_001255265.1| NHL repeat protein [Clostridium botulinum A str. ATCC 3502]
 gi|153933286|ref|YP_001385008.1| NHL repeat-containing protein [Clostridium botulinum A str. ATCC
           19397]
 gi|153935024|ref|YP_001388478.1| NHL repeat-containing protein [Clostridium botulinum A str. Hall]
 gi|148290208|emb|CAL84327.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929330|gb|ABS34830.1| NHL repeat protein [Clostridium botulinum A str. ATCC 19397]
 gi|152930938|gb|ABS36437.1| NHL repeat protein [Clostridium botulinum A str. Hall]
          Length = 467

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/493 (37%), Positives = 276/493 (55%), Gaps = 45/493 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL        + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPMTIEWLGAKRTNLDK-LKDRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGI+HPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP---LSLEKDNDPRLFTSPLKFPGKLA 607
            ++GEG+R+ LD ++   + ++      DN   P   + LE   +   +     +P K +
Sbjct: 134 MVSGEGNRELLDQIIGDTMEYF------DNINWPDKNIILENKCEKEEYI----YPSKAS 183

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           I+  N  +  S+   NRIV+ D +   I  IG SGE GL+DG F +A F  P+GL +   
Sbjct: 184 IN-ENGLIAFSEKGKNRIVILDQNLEKIKIIG-SGEYGLKDGDFKEAQFKAPEGLRF--I 239

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +N +YVADTENH++RE D   + V+T+AGNG K           +  LNSPWD+  + + 
Sbjct: 240 ENKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDL--EILK 297

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       ++
Sbjct: 298 DCIYIAMAGNHQIWKYNMRDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KKL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   KN
Sbjct: 356 YFVDSETSSIRYADLEEHKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKN 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  + +V  +    K G          L+EP G I   + N++I
Sbjct: 409 NTLYIADTYNNRIVKADILNKKVEII----KRG----------LNEPNG-IAIYDDNIYI 453

Query: 908 ADTNNNIIRYLDL 920
            +TN+  I  + +
Sbjct: 454 CNTNHGKIEKISI 466



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 19/208 (9%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IENKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKD 298

Query: 784 FMEIYVADSESSSIRALNL--KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+  K+  S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMRDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   ++V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKKLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPEL 927
            +N  L+IADT NN I   D+  ++ E+
Sbjct: 406 YKNNTLYIADTYNNRIVKADILNKKVEI 433



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+ SIR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   K+  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILKDC-IYIAMAGNHQIWKYNMRDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKKLYFVDSETSSIRYADL--EEHKVHTLIGKGL 383


>gi|395218326|ref|ZP_10401983.1| alkyl hydroperoxide reductase [Pontibacter sp. BAB1700]
 gi|394454578|gb|EJF09204.1| alkyl hydroperoxide reductase [Pontibacter sp. BAB1700]
          Length = 474

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 198/506 (39%), Positives = 280/506 (55%), Gaps = 46/506 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE      WLNT      +D +GK+V+LDFWT+ CINC H++PDL+ LE+++ D+   V+
Sbjct: 9   PEINTPHGWLNTDRSWSIKDFRGKIVLLDFWTFGCINCQHIVPDLKRLEEEFADV-LVVI 67

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+HSAKFD EK  E IR A+ ++G+ HPVVND D  +W + GV +WPT  ++ PNGK++ 
Sbjct: 68  GIHSAKFDAEKQTETIRQAIQKFGVEHPVVNDADFAIWNQYGVRAWPTTVLIDPNGKVVG 127

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKL--LDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
           Q AGEG    + D V   +    ++ +  L+ TP+P+  E           L FP KL  
Sbjct: 128 QHAGEG----VYDTVRPYIQRMKEEFINELNQTPIPVQTEVKE-----AGVLSFPSKLIS 178

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKK 668
           D   N L++SDS HNRI+     G  +  IG SGE G  +G + DATFN P GLA +   
Sbjct: 179 DAAGN-LYLSDSGHNRILKLSQQGQVLEVIG-SGERGFNNGGYADATFNEPHGLALHGST 236

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728
             LYVAD +NHA+R++D  +  V T AG G     +   ++      NSPWD+       
Sbjct: 237 --LYVADAKNHAIRKVDLQHRMVSTAAGTGELEYYFHDDKRREPVNPNSPWDLLI--YGR 292

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            ++IA AG HQI            F+G G E   +G      +F QPSG+S+  + +  Y
Sbjct: 293 SMFIANAGNHQILRMDLETEQVYRFAGSGREALTDGLLD-EAAFNQPSGLSIRGEVL--Y 349

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           VAD+E+S+IR +NLKTG      G        LF FGD DG   + LLQH +G+    + 
Sbjct: 350 VADAEASAIRTVNLKTGMVLTPLG------RGLFDFGDVDGDVDDALLQHCVGLEVI-DS 402

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
            +Y+AD+YN KIK LD   +RV TL         DG      L EP  ++   NG+L++ 
Sbjct: 403 DVYIADTYNGKIKVLDMERHRVRTLT--------DG------LHEPNDLLYL-NGHLWVT 447

Query: 909 DTNNNIIRYLDLN---KEEPELQTLE 931
            TN++ +  +DLN   KEE +++ LE
Sbjct: 448 STNSHQLYQVDLNTGAKEEVKVKELE 473


>gi|227202668|dbj|BAH56807.1| AT1G56500 [Arabidopsis thaliana]
          Length = 236

 Score =  297 bits (760), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 148/184 (80%), Positives = 164/184 (89%), Gaps = 8/184 (4%)

Query: 66  TDVNVSSES--------KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDF 117
           T ++V++ES         WGKVSAVLFDMDGVLCNSE+ SRRAAVDVF EMGVEVTV+DF
Sbjct: 53  TKLSVAAESPAATIATDDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDF 112

Query: 118 LPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQC 177
           +PFMGTGEA FLGGVASVK VKGFD +AAK+RFFEIYLDKYAKP SGIGFPGALEL+ +C
Sbjct: 113 VPFMGTGEAKFLGGVASVKEVKGFDPDAAKERFFEIYLDKYAKPESGIGFPGALELVTEC 172

Query: 178 KSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237
           K+KGLKVAVASSADRIKVDANL AAGL ++MFDAIVSADAFENLKPAPDIFL+A+KIL V
Sbjct: 173 KNKGLKVAVASSADRIKVDANLKAAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGV 232

Query: 238 PTSE 241
           PTSE
Sbjct: 233 PTSE 236


>gi|168183170|ref|ZP_02617834.1| NHL repeat protein [Clostridium botulinum Bf]
 gi|237796201|ref|YP_002863753.1| NHL repeat-containing protein [Clostridium botulinum Ba4 str. 657]
 gi|182673679|gb|EDT85640.1| NHL repeat protein [Clostridium botulinum Bf]
 gi|229261965|gb|ACQ52998.1| NHL repeat protein [Clostridium botulinum Ba4 str. 657]
          Length = 467

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 185/493 (37%), Positives = 280/493 (56%), Gaps = 45/493 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL        + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPMTIEWLGAKRTNLDK-LKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGI+HPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLD-NTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            ++GEG+R+ LD ++   + ++      D N  L    EK+           +P K++I+
Sbjct: 134 MVSGEGNRELLDQIIGDTIEYFDNINWSDKNIILENKCEKE--------EYIYPSKISIN 185

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
             N  +  S+   NRIV+ D +   I  IG SG+ GL+DG F +A F  P+GL +   +N
Sbjct: 186 -ENGLIAFSEKGKNRIVILDQNLEKIKIIG-SGKYGLKDGDFKEAQFKAPEGLRF--IEN 241

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWDVCYKPIN 727
            +YVADTENH++RE D   + V+T+AGNG K  +Y    KG +    LNSPWD+  + + 
Sbjct: 242 KIYVADTENHSIRECDLEKEIVKTIAGNGQK--EYSPMAKGDALNVSLNSPWDL--EILK 297

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       ++
Sbjct: 298 DCIYIAMAGNHQIWKYNMKDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KKL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   KN
Sbjct: 356 YFVDSETSSIRYADLEEHKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKN 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  + +V  +    K G          L+EP GI   ++  +++
Sbjct: 409 NILYIADTYNNRIVKADILNKKVEII----KRG----------LNEPNGIAIYEDS-IYV 453

Query: 908 ADTNNNIIRYLDL 920
            +TNN  I  +++
Sbjct: 454 CNTNNGKIEKINM 466



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+ SIR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   K+  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILKDC-IYIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKKLYFVDSETSSIRYADL--EEHKVHTLIGKGL 383



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IENKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKD 298

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+K     S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMKDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   ++V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKKLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPEL 927
            +N  L+IADT NN I   D+  ++ E+
Sbjct: 406 YKNNILYIADTYNNRIVKADILNKKVEI 433


>gi|168027993|ref|XP_001766513.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682158|gb|EDQ68578.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 216

 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 142/216 (65%), Positives = 180/216 (83%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           V  VLFDMDGVLC+SE  SR+AAV++FAEMG  V  +DF+PFMGTG+ANFLGGVA   G+
Sbjct: 1   VRGVLFDMDGVLCDSEHCSRKAAVELFAEMGYIVDDKDFIPFMGTGDANFLGGVARKYGI 60

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
           K FD+ +AKKR+++IY+ K+A PNSG+G+PGAL+LI QCK  GLK+AVASSADR+KVDAN
Sbjct: 61  KDFDTASAKKRYYQIYIGKFATPNSGLGYPGALDLILQCKEAGLKLAVASSADRVKVDAN 120

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           LAAAG+P + FDAI++AD FE LKPAPD FL+A++ L +P  EC+VIEDA+AGVQAA+AA
Sbjct: 121 LAAAGIPQNTFDAIIAADLFERLKPAPDAFLAAAESLGLPPHECVVIEDAIAGVQAARAA 180

Query: 259 QMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
            MRCI+VTTTLS+E+L    P L+R++I  +SL DI
Sbjct: 181 GMRCISVTTTLSKEQLTAEGPQLVREDISRISLLDI 216


>gi|221633398|ref|YP_002522623.1| hypothetical protein trd_1418 [Thermomicrobium roseum DSM 5159]
 gi|221156519|gb|ACM05646.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159]
          Length = 443

 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 181/473 (38%), Positives = 258/473 (54%), Gaps = 39/473 (8%)

Query: 475 LEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVN 534
           +  +E++Y      V+GVHS KF NE++ + +R AVLR  I+HPVV+D  + +WR   + 
Sbjct: 1   MRAVEERYPTQ-VVVIGVHSPKFPNEREPQNVRQAVLREEITHPVVHDPALQIWRSYAIR 59

Query: 535 SWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL--SLEKDND 592
           +WPT   + P+G LL    GE      + LV A      +  +  + P  L   LE+   
Sbjct: 60  AWPTLVFLSPDGYLLGIHEGE---ISAESLVRAVGRLLARTGVTTSEPFALLSVLERPQ- 115

Query: 593 PRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
                 PL FPGKLA+D   +RL +SD+ H+R+V+  LDG     IG  G  GL DG+F 
Sbjct: 116 -----GPLAFPGKLAVDPSRDRLVVSDTGHHRLVIARLDGTVTAVIG-DGRPGLVDGTFA 169

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
           +A F  PQG+A   +    +VAD  NHA+R ID    TV TLAG G  G           
Sbjct: 170 EARFREPQGIALVGET--CFVADRGNHAIRRIDLAAGTVETLAGTGRLGQGMLSAGPAHQ 227

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772
             L SPW + ++     +++AMAG HQIW      G+ + ++G G E  + G       F
Sbjct: 228 VDLRSPWALWHR--RGLLFVAMAGSHQIWVLDLASGIIQPYAGSGME-GIQGGPLERAWF 284

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNL------KTGGSRLLAGGDPIFPDNLFKFGD 826
           AQPSG  L+ D   +YVA  E+S+IR ++L      K G  RL+  G       LF FGD
Sbjct: 285 AQPSG--LASDDRALYVACPEASAIRTVDLPGTPNPKVG--RLVGTG-------LFDFGD 333

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAA 886
           RDG G  VLLQHPL V      ++ VAD+YNHKIK+LDP + R S+  G G+ G +DG  
Sbjct: 334 RDGTGDTVLLQHPLDVAWTGE-ELLVADTYNHKIKRLDPVARRCSSWLGTGQPGHEDGPP 392

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
             A+  EP+G+    +  +++ADTNN+ +R +D  +    ++TLEL+G+  P+
Sbjct: 393 ERARFWEPSGLATTFD-RVYVADTNNHAVRVID--RTTGLVRTLELQGLAAPS 442


>gi|168180827|ref|ZP_02615491.1| NHL repeat protein [Clostridium botulinum NCTC 2916]
 gi|421838034|ref|ZP_16272034.1| NHL repeat-containing protein [Clostridium botulinum CFSAN001627]
 gi|182668214|gb|EDT80193.1| NHL repeat protein [Clostridium botulinum NCTC 2916]
 gi|409739668|gb|EKN40278.1| NHL repeat-containing protein [Clostridium botulinum CFSAN001627]
          Length = 467

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 187/495 (37%), Positives = 280/495 (56%), Gaps = 49/495 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL        + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPMTIEWLGAKRTNLDK-LKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGI+HPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP---LSLEKDNDPRLFTSPLKFPGKLA 607
            ++GEG+R+ LD ++   + ++      DN   P   + LE   +   +     +P K +
Sbjct: 134 MVSGEGNRELLDQIIGDTMEYF------DNINWPDKNIILENKCEKEEYI----YPSKAS 183

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           I+  N  +  S+   NRIV+ D +   I  IG SGE GL+DG F +A F  P+GL +   
Sbjct: 184 IN-ENGLIAFSEKGKNRIVILDQNLEKIKIIG-SGEYGLKDGDFKEAQFKAPEGLRF--I 239

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWDVCYKP 725
           +N +YVADTENH++RE D   + V+T+AGNG K  +Y    KG +    LNSPWD+  + 
Sbjct: 240 ENKIYVADTENHSIRECDLEKEIVKTIAGNGQK--EYSPMAKGDALNVSLNSPWDL--EI 295

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
           +   +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       
Sbjct: 296 LKGCIYIAMAGNHQIWKYNMRDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-K 353

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           ++Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   
Sbjct: 354 KLYFVDSETSSIRYADLEEHKVYTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-Y 406

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
           KN  +Y+AD+YN++I K D  + +V  +    K G          L+EP GI   ++ N+
Sbjct: 407 KNNTLYIADTYNNRIVKADILNKKVEII----KRG----------LNEPNGIAIYED-NI 451

Query: 906 FIADTNNNIIRYLDL 920
           +I +TN+  I  + +
Sbjct: 452 YICNTNHGKIEKISI 466



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+ SIR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   K G IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILK-GCIYIAMAGNHQIWKYNMRDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKKLYFVDSETSSIRYADL--EEHKVYTLIGKGL 383



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 19/208 (9%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +   
Sbjct: 239 IENKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKG 298

Query: 784 FMEIYVADSESSSIRALNL--KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+  K+  S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMRDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   ++V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKKLYFVDSETSSIRYADLEEHKVYTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPEL 927
            +N  L+IADT NN I   D+  ++ E+
Sbjct: 406 YKNNTLYIADTYNNRIVKADILNKKVEI 433


>gi|260904571|ref|ZP_05912893.1| NHL repeat-containing protein [Brevibacterium linens BL2]
          Length = 647

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 177/456 (38%), Positives = 252/456 (55%), Gaps = 35/456 (7%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           W+N+        DL+GKV++LDFWT+CCINC+HVL +L  LE+KY +    ++GVHS KF
Sbjct: 27  WMNSGGKDLSLADLRGKVILLDFWTFCCINCLHVLDELRPLEEKY-NKELVIIGVHSPKF 85

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           + E+ +EA+  AV RY + H V++D D+  W+     +WPT AV+ P G L+A L+GEGH
Sbjct: 86  EFERTVEAVDQAVERYQVEHLVLDDPDLVTWQAYTARAWPTLAVIDPEGYLVATLSGEGH 145

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
              L +++E  +  +  K  L +   P       +  LF     +PGK+  ++ +  L +
Sbjct: 146 GAGLGEIIEGLIDEHSAKGTLHSGDGPYVPPPAPETELF-----YPGKVT-ELPSGNLLV 199

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA-----YNAKKNL-L 671
           +DS H+ +V  D  G  I++   +GE G  DG F  A+F+ P G+        AK    L
Sbjct: 200 ADSGHHSLVEYDASGQNIIRRIGTGERGANDGDFTSASFSEPGGITVLPDDVAAKAGYHL 259

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTK----------GSDYQGGEKGTSQL---LNSP 718
            VADT NH LR I+   +TV T+AG G++          G+  + G      L   L+SP
Sbjct: 260 VVADTVNHTLRGINLDTETVTTVAGTGSQHMVGAIDNVVGTHGELGRYDGPALDVKLSSP 319

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
           WDV Y P   +V +AMAG H IW      G  R  SG   E   +G +     FAQ SG+
Sbjct: 320 WDVLYIPATAEVVVAMAGNHTIWSFDPETGSIRLLSGTMNEGLADGEAE-AAWFAQTSGL 378

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
            LS D  ++++ADSE+S+IR L+  TG    L G      + LF FG RDG  +E  LQH
Sbjct: 379 DLSSD-GDVFIADSETSAIRRLDPSTGAVSTLIG------EGLFDFGFRDGPAAEARLQH 431

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           PLGV    +G I +AD+YN  I++ D  +N VSTLA
Sbjct: 432 PLGVRSLPDGSIAIADTYNGAIRRYDFTTNEVSTLA 467


>gi|424835068|ref|ZP_18259738.1| NHL repeat-containing protein [Clostridium sporogenes PA 3679]
 gi|365978195|gb|EHN14287.1| NHL repeat-containing protein [Clostridium sporogenes PA 3679]
          Length = 467

 Score =  296 bits (758), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 182/490 (37%), Positives = 276/490 (56%), Gaps = 39/490 (7%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL T      + LK +V++LDFWT+CCINC+HV+ DL++LE KYK+    V+
Sbjct: 16  PNFPMTIEWLGTKRTNLDK-LKNRVILLDFWTFCCINCIHVIDDLKYLEDKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGI+HPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFVLIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
            ++GEG+R+ LD ++   + ++     ++ +   + LE   +   +     +P K++I+ 
Sbjct: 134 MVSGEGNRELLDQIIGDTIEYFDN---INWSEENIILENKCEKEEYI----YPSKISIN- 185

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            N  +  S+   NRIV+ D +   I  IGSS E GL+DG F +A F  P+GL +   KN 
Sbjct: 186 ENGLIAFSEKGKNRIVILDQNLEKIKTIGSS-EYGLKDGDFREAQFKAPEGLRF--IKNK 242

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +YVADTENH +RE D   + V+T+AGNG K           +  LNSPWD+  + + + +
Sbjct: 243 IYVADTENHFIRECDLEKEMVKTIAGNGQKEYSPMAKGDALNVSLNSPWDL--EILEDCI 300

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +        +Y  
Sbjct: 301 YIAMAGNHQIWKYNMKDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KRLYFV 358

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI 850
           DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   K+  +
Sbjct: 359 DSETSSIRYADLEEHKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKDNIL 411

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT 910
           Y+AD+YN++I K D  + +V  +    K G          L+EP GI   ++ N++I +T
Sbjct: 412 YIADTYNNRIIKADILNKKVEVI----KKG----------LNEPNGIAIYED-NIYICNT 456

Query: 911 NNNIIRYLDL 920
           N+  I  + +
Sbjct: 457 NDGKIEKISI 466



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 24/221 (10%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IKNKIYVADTENHFIRECDLEKEMVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILED 298

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+K     S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMKDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   ++V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKRLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADT-NNNIIRYLDLNKEEPELQTLELKGVQPPT 939
            ++  L+IADT NN II+   LNK+   ++    KG+  P 
Sbjct: 406 YKDNILYIADTYNNRIIKADILNKKVEVIK----KGLNEPN 442



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+  IR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIKN--KIYVADTENHFIRECDLEKEMVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   ++  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILEDC-IYIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKRLYFVDSETSSIRYADL--EEHKVHTLIGKGL 383


>gi|170759724|ref|YP_001788082.1| NHL repeat-containing protein [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406713|gb|ACA55124.1| NHL repeat protein [Clostridium botulinum A3 str. Loch Maree]
          Length = 464

 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 184/485 (37%), Positives = 275/485 (56%), Gaps = 45/485 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL        + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 13  PNFPMTIEWLGAKRTNLDK-LKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 70

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGI+HPVVND + ++W    VN+WPTF ++ P G    
Sbjct: 71  GVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFT 130

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLD-NTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            ++GEG+R+ LD ++   + ++      D N  L    EK+           +P K++I+
Sbjct: 131 MVSGEGNRELLDQIIGDTIEYFHNINWSDENIILENKYEKE--------EYMYPSKISIN 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
             N  +  S+   NRIV+ D +   I  IGSS E GL+DG F +  F  P+GL +   +N
Sbjct: 183 -ENGLIAFSEKGKNRIVILDQNLEKIKTIGSS-EYGLKDGDFKETQFKAPEGLRF--IEN 238

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWDVCYKPIN 727
            +YVADTENH++RE D   + V+T+AGNG K  +Y    KG +    LNSPWD+  + + 
Sbjct: 239 KIYVADTENHSIRECDLEKEIVKTIAGNGQK--EYSPMAKGDALNVSLNSPWDL--EILK 294

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       ++
Sbjct: 295 DCIYIAMAGNHQIWKYNMKDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KKL 352

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   K+
Sbjct: 353 YFVDSETSSIRYADLEDHKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKD 405

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  +++V  +    K G          L+EP G IE    N++I
Sbjct: 406 NILYIADTYNNRIVKADILNDKVEII----KKG----------LNEPNG-IELYENNIYI 450

Query: 908 ADTNN 912
            +TN+
Sbjct: 451 CNTND 455



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
           T F  P G+    +  +IYVAD+E+ SIR  +L+    + +AG        + K     G
Sbjct: 225 TQFKAPEGLRFIEN--KIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAK-----G 277

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA 889
               V L  P  +   K+  IY+A + NH+I K +     + +  G G    +DG+    
Sbjct: 278 DALNVSLNSPWDLEILKDC-IYIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKC 336

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
            L++ + +       L+  D+  + IRY DL  E+ ++ TL  KG+
Sbjct: 337 LLAQTSALCYDGKKKLYFVDSETSSIRYADL--EDHKVHTLIGKGL 380



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 22/220 (10%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 236 IENKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKD 295

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+K     S +  GG+ I          RDG   + LL     
Sbjct: 296 C--IYIAMAGNHQIWKYNMKDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 343

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   ++V TL G G   F  K G+     L  P  + +
Sbjct: 344 LCYDGKKKLYFVDSETSSIRYADLEDHKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 402

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
            ++  L+IADT NN I   D+  ++ E+     KG+  P 
Sbjct: 403 YKDNILYIADTYNNRIVKADILNDKVEIIK---KGLNEPN 439


>gi|387819032|ref|YP_005679379.1| hypothetical protein H04402_02846 [Clostridium botulinum H04402
           065]
 gi|322807076|emb|CBZ04650.1| gll0387 protein [Clostridium botulinum H04402 065]
          Length = 467

 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 277/493 (56%), Gaps = 45/493 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL        + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPMTIEWLGAKRTNLDK-LKDRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGI+HPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP---LSLEKDNDPRLFTSPLKFPGKLA 607
            ++GEG+R+ LD ++   + ++      DN   P   + LE   +   +     +P K +
Sbjct: 134 MVSGEGNRELLDQIIGDTIEYF------DNINWPDKNIILENKCEKEEYI----YPSKAS 183

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           I+  N  +  S+   NRIV+ D +   I  IG SGE GL+DG F +A F  P+GL +   
Sbjct: 184 IN-ENGLIAFSEKGKNRIVILDQNLEKIKIIG-SGEYGLKDGDFKEAQFKAPEGLRF--I 239

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +N +YVADTENH++RE D   + V+T+AGNG K           +  LNSPWD+  + + 
Sbjct: 240 ENKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDL--EILK 297

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       ++
Sbjct: 298 DCIYIAMAGNHQIWKYNMRDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KKL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   KN
Sbjct: 356 YFVDSETSSIRYADLEEHKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKN 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  +++V  +    K G          L+EP GI   ++  ++I
Sbjct: 409 NTLYIADTYNNRIVKADILNDKVEII----KKG----------LNEPNGIAIYEDS-IYI 453

Query: 908 ADTNNNIIRYLDL 920
            +TN+  I  + +
Sbjct: 454 CNTNDGKIEKISI 466



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 22/220 (10%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IENKIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKD 298

Query: 784 FMEIYVADSESSSIRALNL--KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+  K+  S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMRDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   ++V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKKLYFVDSETSSIRYADLEEHKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
            +N  L+IADT NN I   D+  ++ E+     KG+  P 
Sbjct: 406 YKNNTLYIADTYNNRIVKADILNDKVEIIK---KGLNEPN 442



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+ SIR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHSIRECDLEKEIVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   K+  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILKDC-IYIAMAGNHQIWKYNMRDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKKLYFVDSETSSIRYADL--EEHKVHTLIGKGL 383


>gi|226950178|ref|YP_002805269.1| NHL repeat-containing protein [Clostridium botulinum A2 str. Kyoto]
 gi|226843692|gb|ACO86358.1| NHL repeat protein [Clostridium botulinum A2 str. Kyoto]
          Length = 467

 Score =  296 bits (757), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 277/493 (56%), Gaps = 45/493 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL T      + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPITIEWLGTKRTNLDK-LKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGISHPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGISHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP---LSLEKDNDPRLFTSPLKFPGKLA 607
            ++GEG+R+ LD ++   + ++      DN   P   + LE   +   +     +P K++
Sbjct: 134 MVSGEGNRELLDQIIGDTIEYF------DNINWPDKNIILENKCEKEEYM----YPSKIS 183

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           I+  +  +  S+   NRIV+ D +   I  IGSS E GL+DG F +A F  P+GL +   
Sbjct: 184 IN-EDGLIAFSEKGKNRIVILDQNLEKIKTIGSS-EYGLKDGDFKEAQFKAPEGLRF--I 239

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +N +YVADTENH +RE D   + V+T+AGNG K           +  LNSPWD+  + + 
Sbjct: 240 ENKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDL--EILK 297

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       ++
Sbjct: 298 DCIYIAMAGNHQIWKYNMKDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KKL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   K+
Sbjct: 356 YFVDSETSSIRYADLEENKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKD 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  + +V  +    K G          L+EP GI   ++  ++I
Sbjct: 409 NILYIADTYNNRIVKADILNKKVEII----KRG----------LNEPNGIAIYEDS-IYI 453

Query: 908 ADTNNNIIRYLDL 920
            +TN+  I  + +
Sbjct: 454 CNTNDGKIEKISI 466



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IENKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKD 298

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+K     S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMKDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   N+V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKKLYFVDSETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPEL 927
            ++  L+IADT NN I   D+  ++ E+
Sbjct: 406 YKDNILYIADTYNNRIVKADILNKKVEI 433



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+  IR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   K+  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILKDC-IYIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKKLYFVDSETSSIRYADL--EENKVHTLIGKGL 383


>gi|408679290|ref|YP_006879117.1| hypothetical protein SVEN_3572 [Streptomyces venezuelae ATCC 10712]
 gi|328883619|emb|CCA56858.1| hypothetical protein SVEN_3572 [Streptomyces venezuelae ATCC 10712]
          Length = 597

 Score =  295 bits (756), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 183/530 (34%), Positives = 277/530 (52%), Gaps = 55/530 (10%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT        DL+GK+V+LDFWT+CC+NC+HVL +L  LE+K+
Sbjct: 11  RRARVRAPELIGKGGWLNTGGDDLSLADLRGKIVLLDFWTFCCVNCLHVLDELRELEEKH 70

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    +VGVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+
Sbjct: 71  RDT-LVIVGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVI 129

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   +  LVE     +G K  L     P        P    + L+F
Sbjct: 130 DPEGYVVAQHAGEGHANAIRTLVEELEAEHGAKGTLRRGDGPYVA-----PEPVATELRF 184

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK A+ + +    +SD+  +R+V    DG  +V+               +  F  PQGL
Sbjct: 185 PGK-AVLLPSGNFLVSDTTRHRLVELAADGETVVR------------RIGEGVFREPQGL 231

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPW 719
           A       + VADT NHALR  D     +  +AG G +   +QG       L   L+SPW
Sbjct: 232 A-QLPDGTVVVADTVNHALRTYDPETGVIERVAGTGKQW--WQGSPTSGPALDVDLSSPW 288

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +     KV+IAMAG HQ+W +    G     +G   E  ++G ++    FAQPSG++
Sbjct: 289 DVAW--WQGKVWIAMAGVHQLWTYDPGSGTVEVAAGTTNEGLVDGPAA-EAWFAQPSGLA 345

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
            + D   ++VADSE+S++R ++ + G    +  G       LF FG RDG   + LLQHP
Sbjct: 346 ATED--RLWVADSETSALRWVDPEGGVHTAVGTG-------LFDFGHRDGAAEQALLQHP 396

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV    +G + V+D+YNH +++ DPAS  V+T              LA  L EP+G + 
Sbjct: 397 LGVTALPDGSVAVSDTYNHALRRFDPASGEVTT--------------LATDLREPSGAVL 442

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLR 949
             +G++ + ++  + +  L L +E   +  +  +  +  T    +P RLR
Sbjct: 443 V-DGDIVVVESARHRLTRLRLPEEAVRVDAVAHRTRREAT--EVAPGRLR 489


>gi|229822379|ref|YP_002883905.1| alkyl hydroperoxide reductase [Beutenbergia cavernae DSM 12333]
 gi|229568292|gb|ACQ82143.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Beutenbergia cavernae DSM 12333]
          Length = 641

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 178/464 (38%), Positives = 249/464 (53%), Gaps = 45/464 (9%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WL T   +    DL+G+VVVLDFWT+CCINC+HVL +L  LE+  +D+  T+VGVHS KF
Sbjct: 20  WLGTGGRELSLADLRGRVVVLDFWTFCCINCLHVLDELRELEEARRDV-LTIVGVHSPKF 78

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D EA+  AV RY + HPV++D ++  W   G  +WPT  V+ P G ++AQ+AGEGH
Sbjct: 79  VHEADPEALAAAVDRYEVRHPVLDDPELVTWSAYGARAWPTLVVIDPEGYVVAQMAGEGH 138

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
              L+ LV+  +  +  K  L         + D  P +  SP    L+FP K AI + N 
Sbjct: 139 ASALEALVDELVEEHRAKGTLRT-------DDDGGPYVPPSPTPGTLRFPAK-AIALENG 190

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNL 670
            L ++D+ H+ +     DG  +V+   SGE GL DG  + A F+ P GL       +  L
Sbjct: 191 NLLVADAGHHSLAELGPDGETLVRRVGSGERGLVDGGPNVARFSEPNGLCLVPVELRARL 250

Query: 671 LY---VADTENHALREIDFVNDTVRTLAGNGTK--------GSDYQGGEK---------G 710
            Y   VADT NHALR +   +  V T+AG G +         SD  GG            
Sbjct: 251 GYDVLVADTVNHALRGVRLADGHVSTVAGTGQQYVVGAPDNASDPHGGTHPVGFGDQFVP 310

Query: 711 TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
           TS  L+SPWDV + P      +AMAG H +W      G     +G  +E  L    +   
Sbjct: 311 TSVKLSSPWDVAWSPDLAAFVVAMAGNHTLWAFDDEQGSLTRLAGTEHE-GLRDGPAAEA 369

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            FAQPSG++++ D   I+VADSE+S++R L+   G      G        LF+FG RDG 
Sbjct: 370 WFAQPSGLAVAQDG-RIWVADSETSALRWLDPAGGDVHTAVG------QGLFEFGHRDGA 422

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
             + LLQHPLGV    +  + VAD+YN  +++ DPA+  V+T+A
Sbjct: 423 ADQALLQHPLGVAALPDASVLVADTYNGALRRHDPATGVVTTIA 466



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 28/216 (12%)

Query: 727 NEKVYIAMAGQHQIWEHSTVDG---VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
           N  + +A AG H + E    DG   V R  SG   ER L         F++P+G+ L P 
Sbjct: 189 NGNLLVADAGHHSLAELGP-DGETLVRRVGSG---ERGLVDGGPNVARFSEPNGLCLVPV 244

Query: 784 FM------EIYVADSESSSIRALNLKTGGSRLLAGGDPIF----PDNL---------FKF 824
            +      ++ VAD+ + ++R + L  G    +AG    +    PDN            F
Sbjct: 245 ELRARLGYDVLVADTVNHALRGVRLADGHVSTVAGTGQQYVVGAPDNASDPHGGTHPVGF 304

Query: 825 GDRDGMGSEVLLQHPLGVYCAKN-GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
           GD+  + + V L  P  V  + +     VA + NH +   D     ++ LAG    G +D
Sbjct: 305 GDQ-FVPTSVKLSSPWDVAWSPDLAAFVVAMAGNHTLWAFDDEQGSLTRLAGTEHEGLRD 363

Query: 884 GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           G A  A  ++P+G+  AQ+G +++AD+  + +R+LD
Sbjct: 364 GPAAEAWFAQPSGLAVAQDGRIWVADSETSALRWLD 399


>gi|153938821|ref|YP_001392044.1| NHL repeat-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|384463040|ref|YP_005675635.1| NHL repeat protein [Clostridium botulinum F str. 230613]
 gi|152934717|gb|ABS40215.1| NHL repeat protein [Clostridium botulinum F str. Langeland]
 gi|295320057|gb|ADG00435.1| NHL repeat protein [Clostridium botulinum F str. 230613]
          Length = 467

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 182/493 (36%), Positives = 276/493 (55%), Gaps = 45/493 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL        + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPMTIEWLGAKRTNLDK-LKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGISHPVVND + ++W    VN+WPTF ++ P G   A
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGISHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFA 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP---LSLEKDNDPRLFTSPLKFPGKLA 607
            ++GEG+R+ LD ++   + ++      DN   P   + LE   +   +     +P K++
Sbjct: 134 MVSGEGNRELLDQIIGDTIEYF------DNINWPDENIILENKCEKEEYM----YPSKIS 183

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           I+  +  +  S+   NRIV+ D +   I  IGSS E GL+DG F +A F  P+GL +   
Sbjct: 184 IN-EDGLIAFSEKGKNRIVILDQNLEKIKTIGSS-EYGLKDGDFKEAQFKAPEGLRF--I 239

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +N +YVADTENH +RE D   + V+T+AGNG K           +  LNSPWD+  + + 
Sbjct: 240 ENKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDL--EILK 297

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       ++
Sbjct: 298 DCIYIAMAGNHQIWKYNMKDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KKL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   K+
Sbjct: 356 YFVDSETSSIRYADLEENKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKD 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  + +V  +    K G          L+EP GI   ++  ++I
Sbjct: 409 NILYIADTYNNRIVKADILNKKVEII----KRG----------LNEPNGIAIYEDS-IYI 453

Query: 908 ADTNNNIIRYLDL 920
            +TN+  I  + +
Sbjct: 454 CNTNDGKIEKISI 466



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IENKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKD 298

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+K     S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMKDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   N+V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKKLYFVDSETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPEL 927
            ++  L+IADT NN I   D+  ++ E+
Sbjct: 406 YKDNILYIADTYNNRIVKADILNKKVEI 433



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+  IR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   K+  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILKDC-IYIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKKLYFVDSETSSIRYADL--EENKVHTLIGKGL 383


>gi|443288042|ref|ZP_21027136.1| Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Micromonospora lupini str. Lupac 08]
 gi|385881808|emb|CCH22229.1| Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Micromonospora lupini str. Lupac 08]
          Length = 612

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/497 (35%), Positives = 271/497 (54%), Gaps = 42/497 (8%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT       +DL+GK+V+ DFWT+CCINC+HVL +L  LE+KY D+   V
Sbjct: 10  PELRGR-QWLNTGGKDLTLQDLRGKIVLADFWTFCCINCLHVLDELRPLEEKYGDV-LVV 67

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++EKD +A+  AV RYG+ HPV++D ++++W++    +WPT +V+ P G ++
Sbjct: 68  IGVHSPKFEHEKDADALVAAVERYGVHHPVLDDPELDMWQQYAARAWPTLSVIDPEGYVV 127

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           A +AGEGH + L  L++  +  +  K  L     P        P    + L+FPGK A+ 
Sbjct: 128 ATMAGEGHAEGLARLIDELIATHEAKGTLHRGTGPYV-----PPPAPETALRFPGK-AVL 181

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY----- 664
           + +  L +SDS  + +V    DG   V+   SGE G  DG    ATF+ PQGL       
Sbjct: 182 LPDGNLLVSDSARHSLVEVAPDGETPVRRIGSGERGRADGPAAAATFSEPQGLCLLPTHV 241

Query: 665 -NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT--KGSDYQGGEKGTSQLLNSPWDV 721
                  L VADT NH LR +   +  V T+AG+G   + S         +  L+SPWD+
Sbjct: 242 AEVAGYDLVVADTVNHLLRGVRLESGEVVTVAGSGRQWRASVDDHAHDALAVDLSSPWDL 301

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
            +   ++K+ IAMAG HQ+W    +      ++G   E   +G  +     AQPSG+S+S
Sbjct: 302 AW--YDDKLIIAMAGIHQLWWFDPIKRTAGMYAGTTVEALRDGPLA-EAWMAQPSGLSVS 358

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
            D + +++ADSE+S++R +     G+ +  G        LF FG  DG     LLQHPLG
Sbjct: 359 ADGVRLWIADSETSAVRYVENGVLGTAVGQG--------LFDFGHVDGPAESALLQHPLG 410

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           V    +G + +AD+YN  +++ DPA+ +VST+A        DG      L+EP+ ++   
Sbjct: 411 VCALPDGSVLIADTYNGAVRRFDPATGQVSTVA--------DG------LAEPSDLVLTP 456

Query: 902 NGNLFIADTNNNIIRYL 918
            G + + ++  + +  L
Sbjct: 457 AGEVLVVESAAHRLTRL 473


>gi|308178347|ref|YP_003917753.1| NHL repeat-containing protein [Arthrobacter arilaitensis Re117]
 gi|307745810|emb|CBT76782.1| NHL repeat-containing protein [Arthrobacter arilaitensis Re117]
          Length = 635

 Score =  293 bits (750), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 195/548 (35%), Positives = 293/548 (53%), Gaps = 57/548 (10%)

Query: 438 DWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT   Q   + L+GK+V+LDFWT+CCINC+HVL +L  LE++YKD+  TV GVHS K
Sbjct: 22  NWLNTGGKQLDLEALRGKIVILDFWTFCCINCLHVLDELRPLEEQYKDVLVTV-GVHSPK 80

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F++E D +A+  AV RY I HPV++D ++  W+  G  +WPT  V+ P G ++A L+GEG
Sbjct: 81  FEHEADPDALAAAVERYEIHHPVLDDPELVTWQAYGARAWPTLVVLDPEGYIVAHLSGEG 140

Query: 557 HRKDLDDLVEAALLFYGKKKLLD--NTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR 614
           H + L  L+E  +  +  K  L   N P      ++ D       L+FPGK AI + N  
Sbjct: 141 HAQGLGSLIEELVAEHEAKGTLHRGNGPYVAPEAREGD-------LRFPGK-AIALANGN 192

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG-------LAYNAK 667
             + DS H+R+V    D + +V+   +G +G  DG    A FN  QG       LA    
Sbjct: 193 FLVGDSGHHRLVELASDLSTVVRTIGAGVKGYADGDAQTAQFNELQGLTALPAELAAEVG 252

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTK--------GSDYQGGEKGTSQL---LN 716
            +++ VADT NH LR ++     V TLAGNG +          + Q  E GT      L+
Sbjct: 253 YDVI-VADTVNHRLRSVNLETGVVGTLAGNGVQRLLDSENARQEVQRTELGTDATNISLS 311

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SPWDV Y P + +V IAMAG HQI+  +        F+G G E   +G+      FAQ S
Sbjct: 312 SPWDVLYHP-SGQVIIAMAGTHQIFAFNPRTSAVSVFAGTGLEGLADGAPD-EAWFAQSS 369

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           G++L  D   +++ADSE+S++R + ++ G ++ +   +      LF FG RDG   +  L
Sbjct: 370 GLAL--DGQNVWIADSETSALRWIEVEEGKAQSV---NTAVGTGLFDFGFRDGDAQQARL 424

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAG 896
           QHPLGV    +  I +ADSYN  +++ DPA+  VST              LA  L EPA 
Sbjct: 425 QHPLGVAVLPDHSIAIADSYNGAVRRFDPATKTVST--------------LAKGLKEPAD 470

Query: 897 II--EAQNGN--LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTP-KSRSPKRLRRR 951
           ++   + +G+  L + +TN + +  + +  E   +     +  +P TP ++   + L R 
Sbjct: 471 VLVDTSVDGDPVLLVVETNTHQLVRIPIPAEALVVDEGASQTQRPKTPVRAGKHEILVRF 530

Query: 952 SSPDAQTI 959
           ++P  Q +
Sbjct: 531 AAPKGQKL 538


>gi|159035770|ref|YP_001535023.1| alkyl hydroperoxide reductase [Salinispora arenicola CNS-205]
 gi|157914605|gb|ABV96032.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Salinispora arenicola CNS-205]
          Length = 612

 Score =  292 bits (747), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 181/502 (36%), Positives = 269/502 (53%), Gaps = 52/502 (10%)

Query: 431 PEFPAKLDWLNTAPLQFRR-DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT        DL+G++ VLDFWT+CCINC+HVL +L  +E+KY D+   V
Sbjct: 10  PELKGR-RWLNTGGRHLTLPDLRGRITVLDFWTFCCINCLHVLDELRPIEQKYADV-LVV 67

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++EKD +A+ +AV RYG+ HPV++D ++N+W++    +WPT AV+ P G ++
Sbjct: 68  IGVHSPKFEHEKDPDALADAVERYGVHHPVLDDPELNMWQQYAARAWPTLAVIDPEGYVV 127

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           A +AGEGH + L  LV+  +  +  K  L     P        P    + L+FPGK A+ 
Sbjct: 128 ATMAGEGHAEGLVRLVDDLIATHEAKGTLHRGDGPYV-----PPAEPETTLRFPGK-AVV 181

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL----AYN 665
           + N  L +SDS  + I     DG  +V+   +G  G  DG    ATF  PQGL    A+ 
Sbjct: 182 LGNGNLLVSDSARHSIAELAPDGERVVRRIGTGARGRADGPATAATFAEPQGLCLLPAHV 241

Query: 666 AK--KNLLYVADTENHALREIDFVNDTVRTLAGNGT--KGSDYQGGEKGTSQLLNSPWDV 721
           A+     L VADT NH LR +      V T+AG G   + +         S  L+SPWD+
Sbjct: 242 ARLVDYDLVVADTVNHLLRGVRLATGEVVTVAGTGRQWRSTVDDHAHDALSVDLSSPWDL 301

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
            +   + ++ IAMAG HQ+W    V      ++G   E   +G  +     AQPSG+S+S
Sbjct: 302 AW--YDGRLVIAMAGIHQLWWFDPVKRTAGMYAGSTVEALKDGPLA-EAWLAQPSGLSVS 358

Query: 782 PDFMEIYVADSESSSIR-----ALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
            D   ++VADSE+S+IR      LN   G               LF+FG  DG  ++ LL
Sbjct: 359 ADGSRLWVADSETSAIRYVQDGVLNTAVG-------------QGLFEFGHVDGPAAQALL 405

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAG 896
           QHPLGV    +G + +AD+YN  +++ DP S+ V T+A        DG      L+EP+ 
Sbjct: 406 QHPLGVCALPDGSVLIADTYNGAVRRYDPESDSVGTVA--------DG------LAEPSD 451

Query: 897 IIEAQNGNLFIADTNNNIIRYL 918
           ++   +G + + ++  + +  L
Sbjct: 452 LVLTPDGGVLVVESAAHRLTQL 473


>gi|254390353|ref|ZP_05005570.1| NHL repeat-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294813833|ref|ZP_06772476.1| NHL repeat containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326442251|ref|ZP_08216985.1| hypothetical protein SclaA2_14354 [Streptomyces clavuligerus ATCC
           27064]
 gi|197704057|gb|EDY49869.1| NHL repeat-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294326432|gb|EFG08075.1| NHL repeat containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 631

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 182/510 (35%), Positives = 275/510 (53%), Gaps = 54/510 (10%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT   Q+  R+L+GK+VVLDFWT+CCINC+HVL +L  LE+K++D    +
Sbjct: 10  PELIGRGGWLNTGDKQYTLRELRGKIVVLDFWTFCCINCLHVLDELRELEEKHRDT-LVI 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E D  A+ +AV RY + HPV++D D+  W++  V +WPT  V+ P G ++
Sbjct: 69  IGVHSPKFVHEADHRAVVDAVERYQVHHPVLDDPDLATWKQYAVRAWPTLVVIDPEGYVV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           AQ AGEGH   +  LV      +  K  L     P        P    + L+FPGK A+ 
Sbjct: 129 AQHAGEGHAHAIARLVAELEREHTAKGTLRRGDGPYVA-----PEPVATELRFPGK-AVL 182

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQI------GSSGEEGLRDGSFDDA-------TF 656
           + +    +SD+  NR+V    DG  +V+       G   EE L D S  D+         
Sbjct: 183 LPSGNFLVSDTTRNRLVELGPDGESVVRRIGNGLPGGVSEEPLSDESPGDSPGESSGRVL 242

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQ 713
           N PQGLA       + VADT +H+++  D  + TV TLAG G    +GS   G  +    
Sbjct: 243 NEPQGLAL-LPDGRVAVADTVHHSIKAYDPESGTVTTLAGTGRQWWQGSPTAGPAREVD- 300

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
            L+SPWDV +     +++IAMAG HQ+W +          +G   E  ++G ++    FA
Sbjct: 301 -LSSPWDVAW--WQGRLWIAMAGTHQLWTYDPATDTVAVAAGTTNEGLVDGPAA-EAWFA 356

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
           QPSG++ + D   +++ADSE+S++R ++  TGG+   A G       LF FG RDG  ++
Sbjct: 357 QPSGLAAAGD--RLWIADSENSALRWID--TGGTVHTAVG-----TGLFDFGHRDGAAAQ 407

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSE 893
            L QHPLGV    +G + V+D+YNH +++ DPA+  V+T              L   L E
Sbjct: 408 ALFQHPLGVTALPDGSVAVSDTYNHALRRYDPATGEVTT--------------LVTDLRE 453

Query: 894 PAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           P+G +   +G++ + ++  + +  L L +E
Sbjct: 454 PSGAVLV-DGDIVVVESARHRLTRLRLPEE 482


>gi|347757619|ref|YP_004865181.1| NHL repeat family protein [Micavibrio aeruginosavorus ARL-13]
 gi|347590137|gb|AEP09179.1| NHL repeat family protein [Micavibrio aeruginosavorus ARL-13]
          Length = 495

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 186/483 (38%), Positives = 267/483 (55%), Gaps = 42/483 (8%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           WLN       +DL+G+ V+LDFWTY CINCM ++PDL+FLE+KY +    V+GVHSAKF+
Sbjct: 36  WLNITRPVTMQDLQGRAVLLDFWTYGCINCMQIVPDLDFLERKYGE-KLLVIGVHSAKFE 94

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            EK  E I  A  R+G++HPV+ND D  +W+  GV +WPT  ++GP+G+  A+ +GEGHR
Sbjct: 95  GEKGNERILAAAQRFGLNHPVINDSDYAIWKSFGVRAWPTQVLIGPDGREAARWSGEGHR 154

Query: 559 KDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFIS 618
             +D  + A             TP    +      R  TS L FP +  I+   + +F++
Sbjct: 155 TAIDAAISATTASI--------TPPFTDISTLVPARTKTSTLSFPAR--IEDAGDFIFVA 204

Query: 619 DSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTEN 678
           DS HNRI+V D  G   + IG SGE G +DGSF  A FN P+G+    +   LY+ADT+N
Sbjct: 205 DSGHNRILVLDRTGAVKMTIG-SGELGHQDGSFVMAKFNHPRGMVLIGRN--LYIADTDN 261

Query: 679 HALREIDFVNDTVRTLAGNG--TKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG 736
           H LR  +  + +V TL+GNG  T    ++  +K  +  L SPWDV   P +  V IAMAG
Sbjct: 262 HMLRVANLDSGSVMTLSGNGKRTFAPPFK-AQKAMTTELASPWDVEALP-DGSVAIAMAG 319

Query: 737 QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796
            HQ+W ++      +   G G E   +G  +L  + AQPSG  L      +Y  D+ESS+
Sbjct: 320 VHQLWRYAPTARTMQVMVGSGAEAVGDG-PALEATLAQPSG--LKNIGSALYFVDAESSA 376

Query: 797 IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
           +R   ++    + L G        LF FG  DGM  +  LQH  G+    N QI +AD+Y
Sbjct: 377 LR--RVENNNVQTLVG------TGLFDFGLVDGMYPDARLQHAQGLTTLNN-QIVLADTY 427

Query: 857 NHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           N+ ++  D  + +++T+   G             L+EP G + A +G L+IADTNN+ I 
Sbjct: 428 NNTLRTYDLQNGQLTTMDLKG-----------LPLNEP-GDVAAIDGKLWIADTNNHRIV 475

Query: 917 YLD 919
             D
Sbjct: 476 VFD 478



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 65/260 (25%)

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           +++A +G ++I       G  +   G G   + +GS  +   F  P G+ L      +Y+
Sbjct: 201 IFVADSGHNRILVLDRT-GAVKMTIGSGELGHQDGSFVM-AKFNHPRGMVLIG--RNLYI 256

Query: 790 ADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           AD+++  +R  NL +G    L+G G   F      F  +  M +E  L  P  V    +G
Sbjct: 257 ADTDNHMLRVANLDSGSVMTLSGNGKRTFAP---PFKAQKAMTTE--LASPWDVEALPDG 311

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI---------IE 899
            + +A +  H++ +  P +  +  + G G     DG AL A L++P+G+         ++
Sbjct: 312 SVAIAMAGVHQLWRYAPTARTMQVMVGSGAEAVGDGPALEATLAQPSGLKNIGSALYFVD 371

Query: 900 AQ--------------------------------------------NGNLFIADTNNNII 915
           A+                                            N  + +ADT NN +
Sbjct: 372 AESSALRRVENNNVQTLVGTGLFDFGLVDGMYPDARLQHAQGLTTLNNQIVLADTYNNTL 431

Query: 916 RYLDLNKEEPELQTLELKGV 935
           R  DL  +  +L T++LKG+
Sbjct: 432 RTYDL--QNGQLTTMDLKGL 449



 Score = 46.2 bits (108), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 4/99 (4%)

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           I+VADS +++I  LD  +  V    G G+ G +DG+ + A+ + P G++     NL+IAD
Sbjct: 201 IFVADSGHNRILVLD-RTGAVKMTIGSGELGHQDGSFVMAKFNHPRGMVLIGR-NLYIAD 258

Query: 910 TNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRL 948
           T+N+++R  +L  +   + TL   G +   P  ++ K +
Sbjct: 259 TDNHMLRVANL--DSGSVMTLSGNGKRTFAPPFKAQKAM 295


>gi|324997987|ref|ZP_08119099.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Pseudonocardia sp. P1]
          Length = 614

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/438 (38%), Positives = 252/438 (57%), Gaps = 21/438 (4%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   +    DL+G++VVLDFWT+CC+NC+H L +L  LE+++ D+  T+VGVHS KF
Sbjct: 32  WLNTGGREITLADLRGRIVVLDFWTFCCVNCLHALDELRPLEEEFGDV-LTIVGVHSPKF 90

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D +A+  AV RYG+ HPV++D ++  W      +WPT AV+ P+G ++A++AGEGH
Sbjct: 91  VHEADPDAVEAAVERYGVEHPVLDDPELTTWDAYAARAWPTLAVIDPDGTVVARMAGEGH 150

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTP-LPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLF 616
              L  LV   +  +G +    + P +P        P    + L+FPGK+A  +      
Sbjct: 151 GPGLAALVRELVDTHGDRLRRGDGPYVP--------PPAPETALRFPGKVAA-LPGGTFL 201

Query: 617 ISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676
           +SD+ H+++V  + D     +    G  G  DG    A F+ PQGL       +L VADT
Sbjct: 202 VSDTAHHQLVELEPDLVTERRRIGDGGRGYTDGPAGSARFSEPQGLLVLDPSTVL-VADT 260

Query: 677 ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG 736
            NHA+R +   + TV T+AG G++  + +    GT+  L+SPWD+   P +  V +AMAG
Sbjct: 261 VNHAVRRVSLDDGTVSTVAGTGSQLRE-RVDPGGTAAELSSPWDLA--PWDGHVVVAMAG 317

Query: 737 QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796
            HQ+W    V G  R  +G   E   +GS +     AQPSG++  PD   ++VADSE S+
Sbjct: 318 SHQLWTVDPVSGQARVLAGTTNEGLRDGSFA-EAFLAQPSGLATGPDGT-LWVADSEISA 375

Query: 797 IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
           +R +++  G    ++         LF+FG RDG  +E LLQHPLGV    +G + VAD+Y
Sbjct: 376 LRRVDVDPGAGPAVSTA---VGQGLFEFGHRDGPAAEALLQHPLGVAVLPDGSVAVADTY 432

Query: 857 NHKIKKLDPASNRVSTLA 874
           N  +++ DPA+  VSTLA
Sbjct: 433 NGAVRRFDPAAGSVSTLA 450



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 24/257 (9%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
             V+DT +H L E++   D V      G  G  Y  G  G+++       +   P    V
Sbjct: 200 FLVSDTAHHQLVELE--PDLVTERRRIGDGGRGYTDGPAGSARFSEPQGLLVLDP--STV 255

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDG---YERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +A    H +   S  DG     +G G    ER   G ++   S    S   L+P    +
Sbjct: 256 LVADTVNHAVRRVSLDDGTVSTVAGTGSQLRERVDPGGTAAELS----SPWDLAPWDGHV 311

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
            VA + S  +  ++  +G +R+LAG            G RDG  +E  L  P G+    +
Sbjct: 312 VVAMAGSHQLWTVDPVSGQARVLAG--------TTNEGLRDGSFAEAFLAQPSGLATGPD 363

Query: 848 GQIYVADSYNHKIKKLD---PASNRVSTLAGIG--KAGFKDGAALAAQLSEPAGIIEAQN 902
           G ++VADS    ++++D    A   VST  G G  + G +DG A  A L  P G+    +
Sbjct: 364 GTLWVADSEISALRRVDVDPGAGPAVSTAVGQGLFEFGHRDGPAAEALLQHPLGVAVLPD 423

Query: 903 GNLFIADTNNNIIRYLD 919
           G++ +ADT N  +R  D
Sbjct: 424 GSVAVADTYNGAVRRFD 440



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 8/150 (5%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F++P G+ L  D   + VAD+ + ++R ++L  G    +AG        L +  D  G  
Sbjct: 241 FSEPQGL-LVLDPSTVLVADTVNHAVRRVSLDDGTVSTVAGTG----SQLRERVDPGGTA 295

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
           +E+     L  +   +G + VA + +H++  +DP S +   LAG    G +DG+   A L
Sbjct: 296 AELSSPWDLAPW---DGHVVVAMAGSHQLWTVDPVSGQARVLAGTTNEGLRDGSFAEAFL 352

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++P+G+    +G L++AD+  + +R +D++
Sbjct: 353 AQPSGLATGPDGTLWVADSEISALRRVDVD 382



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 802 LKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIK 861
           + T G RL  G  P  P              E  L+ P  V     G   V+D+ +H++ 
Sbjct: 162 VDTHGDRLRRGDGPYVPPP----------APETALRFPGKVAALPGGTFLVSDTAHHQLV 211

Query: 862 KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           +L+P         G G  G+ DG A +A+ SEP G++      + +ADT N+ +R + L+
Sbjct: 212 ELEPDLVTERRRIGDGGRGYTDGPAGSARFSEPQGLLVLDPSTVLVADTVNHAVRRVSLD 271


>gi|302535478|ref|ZP_07287820.1| NHL repeat containing protein [Streptomyces sp. C]
 gi|302444373|gb|EFL16189.1| NHL repeat containing protein [Streptomyces sp. C]
          Length = 612

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 250/440 (56%), Gaps = 28/440 (6%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   +    DL+G+VV+LDFWT+CCINC+HVL +L  LE+K++D    ++GVHS KF
Sbjct: 31  WLNTGGKELTLADLRGRVVILDFWTFCCINCLHVLDELRELEEKHRDT-VVIIGVHSPKF 89

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E +  A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++AQ AGEGH
Sbjct: 90  VHEAEHAAVVDAVERYEVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVVAQHAGEGH 149

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
              +  LVE     +  K  L     P        P    + L+FPGK A+ + +  L +
Sbjct: 150 AHAIARLVEELEAEHEAKGTLRRGDGPYVA-----PEPVATDLRFPGK-ALVLPSGNLLV 203

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677
           SDS  +++V  + DG  +V+   SGE G     F    F+ PQGLA      ++ VADT 
Sbjct: 204 SDSTRHQLVELEADGETVVRRIGSGERG-----FGPDAFSEPQGLALLPDGRVV-VADTV 257

Query: 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPWDVCYKPINEKVYIAM 734
           NHALR +D     V T+AG G +   +QG       L   L+SPWDV +     +V+IAM
Sbjct: 258 NHALRVLDPETGAVETVAGTGRQW--WQGSPTSGPALEVDLSSPWDVAW--WQGRVWIAM 313

Query: 735 AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
           AG HQ+W      G     +G   E  ++G ++    FAQPSG++ + D   +++ADSE+
Sbjct: 314 AGVHQLWTWDPESGTVGVAAGTTNEGLVDGPAA-EAWFAQPSGLAAAGD--RLWIADSET 370

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
           S++R +     G  + +         LF FG RDG  ++ LLQHPLGV    +G + V D
Sbjct: 371 SALRWVEPGEDGYVIRSA----VGTGLFDFGHRDGDATQALLQHPLGVTALPDGSVAVCD 426

Query: 855 SYNHKIKKLDPASNRVSTLA 874
           +YNH +++ DPA+ +VSTLA
Sbjct: 427 TYNHALRRYDPATGQVSTLA 446



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 7/149 (4%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
           +F++P G++L PD   + VAD+ + ++R L+ +TG    +AG         ++     G 
Sbjct: 236 AFSEPQGLALLPDG-RVVVADTVNHALRVLDPETGAVETVAGTG----RQWWQGSPTSGP 290

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
             EV L  P  V   + G++++A +  H++   DP S  V   AG    G  DG A  A 
Sbjct: 291 ALEVDLSSPWDVAWWQ-GRVWIAMAGVHQLWTWDPESGTVGVAAGTTNEGLVDGPAAEAW 349

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            ++P+G+  A +  L+IAD+  + +R+++
Sbjct: 350 FAQPSGLAAAGD-RLWIADSETSALRWVE 377


>gi|455647406|gb|EMF26379.1| hypothetical protein H114_24527 [Streptomyces gancidicus BKS 13-15]
          Length = 627

 Score =  290 bits (743), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 171/449 (38%), Positives = 255/449 (56%), Gaps = 27/449 (6%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT    +    L+G+VV+LDFWT+CC+NC+HV+ +L  LE++++D    V
Sbjct: 19  PELAGRGGWLNTGGAAYTLAGLRGRVVLLDFWTFCCVNCLHVVDELRELEERHRDT-LVV 77

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF +E D  A+ +AV RY ++HPV++D ++  W +  V +WPT  VV P G ++
Sbjct: 78  IGVHSPKFPHETDHAAVADAVERYSVTHPVLDDPELTTWTQYAVRAWPTLVVVDPEGYVV 137

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           A  +GEGH  +++ LV      +  K  L    LP +  +        + L+FPGK+   
Sbjct: 138 ATYSGEGHVPEIERLVTELEAEHAAKGTLRRGDLPHTPPEPE-----PTVLRFPGKVLRL 192

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
             +    ++D+  +++V    DG  +++   SG  GL DG    A F  PQGLA      
Sbjct: 193 PSSGTFLVTDTTRHQVVELAEDGETVLRRFGSGGRGLEDGPPGRARFQEPQGLAL-LPDG 251

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK--GTSQLLN--SPWDVCYKP 725
            + VADT NHALR +D  +  V TLAG    GS ++ GE   G ++ +N  SPWDV    
Sbjct: 252 AVVVADTVNHALRRLDPESGEVTTLAGT---GSPWRPGEATDGPARAVNLSSPWDVTV-- 306

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
              K++IAMAG HQ+W +  V G     +G G E+ ++GS+     FAQPSG++++ + +
Sbjct: 307 WQGKLWIAMAGIHQLWSYDPVAGTVAREAGTGGEQLVDGSAK-EALFAQPSGLAVTAEGL 365

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
             +VADSESS++R L    G  R   G        LF FG +DG     L QHPLGV   
Sbjct: 366 --WVADSESSALRRLG-PDGTVRTAVGA------GLFAFGYQDGPADGALFQHPLGVTAL 416

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLA 874
            +G + V+D+YNH +++ DPA+  V+TLA
Sbjct: 417 PDGSLAVSDTYNHALRRYDPATGEVTTLA 445



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK----AG 880
           G  DG       Q P G+    +G + VAD+ NH +++LDP S  V+TLAG G       
Sbjct: 228 GLEDGPPGRARFQEPQGLALLPDGAVVVADTVNHALRRLDPESGEVTTLAGTGSPWRPGE 287

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIA 908
             DG A A  LS P  +   Q G L+IA
Sbjct: 288 ATDGPARAVNLSSPWDVTVWQ-GKLWIA 314



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
           +G   V D+  H++ +L      V    G G  G +DG    A+  EP G+    +G + 
Sbjct: 195 SGTFLVTDTTRHQVVELAEDGETVLRRFGSGGRGLEDGPPGRARFQEPQGLALLPDGAVV 254

Query: 907 IADTNNNIIRYLDLNKEEPELQTLELKGVQP--PTPKSRSPKRLRRRSSP 954
           +ADT N+ +R LD   E  E+ TL   G  P  P   +  P R    SSP
Sbjct: 255 VADTVNHALRRLD--PESGEVTTLAGTG-SPWRPGEATDGPARAVNLSSP 301


>gi|145592666|ref|YP_001156963.1| alkyl hydroperoxide reductase [Salinispora tropica CNB-440]
 gi|145302003|gb|ABP52585.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Salinispora tropica CNB-440]
          Length = 612

 Score =  290 bits (743), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 176/497 (35%), Positives = 270/497 (54%), Gaps = 42/497 (8%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT        DL+G++ VLDFWT+CCINC+HVL +L  +E+KY D+   V
Sbjct: 10  PELKGR-RWLNTGGRHLDLADLRGRITVLDFWTFCCINCLHVLDELRPIEQKYADV-LVV 67

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++EKD +A+ +AV RYG+ HPV++D ++N+W++    +WPT AV+ P G ++
Sbjct: 68  IGVHSPKFEHEKDPDALADAVERYGVHHPVLDDPELNMWQQYAARAWPTLAVIDPEGYVV 127

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           A +AGEGH + L  LV+  +  +  K  L     P        P    + L+FPGK ++ 
Sbjct: 128 ATMAGEGHAEGLVRLVDDLIATHEAKGTLRRGDGPYV-----PPAEPETTLRFPGK-SVV 181

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           + N  L +SDS  + +     DG  +++   +G  G  DG+   ATF  PQGL     + 
Sbjct: 182 LDNGNLLVSDSARHSLAELAPDGETLLRRIGTGARGRADGTATAATFAEPQGLCLLPAQV 241

Query: 670 L------LYVADTENHALREIDFVNDTVRTLAGNGT--KGSDYQGGEKGTSQLLNSPWDV 721
                  L VADT NH LR +      V T+AG G   + +         S  L+SPWD+
Sbjct: 242 SRLVGYDLVVADTVNHLLRGVRLATGEVVTVAGTGRQWRSTVDDHAHDALSVDLSSPWDL 301

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
            +   ++++ IAMAG HQ+W    V   T  ++G   E   +G  +     AQPSG+S+S
Sbjct: 302 AW--YDDRLVIAMAGIHQLWWFDPVKRTTGMYAGSTVEARKDGPLA-EAWLAQPSGLSVS 358

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
            D   ++VADSE+S++R +     G    A G       LF+FG  DG  ++ LLQHPLG
Sbjct: 359 ADGSRLWVADSETSAVRYVE---NGILTTAVG-----QGLFEFGHVDGPAAQALLQHPLG 410

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           V    +G + +AD+YN  +++ DP S+ V T+A        DG      L+EP+ ++   
Sbjct: 411 VCALPDGSVLIADTYNGAVRRYDPESDSVGTVA--------DG------LAEPSDLLLTP 456

Query: 902 NGNLFIADTNNNIIRYL 918
           +G + + ++  + +  L
Sbjct: 457 DGGVLVVESAAHRLTRL 473



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 34/265 (12%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP----- 725
           L V+D+  H+L E+    +T+    G G +G   +     T+     P  +C  P     
Sbjct: 187 LLVSDSARHSLAELAPDGETLLRRIGTGARG---RADGTATAATFAEPQGLCLLPAQVSR 243

Query: 726 -INEKVYIAMAGQHQIW--EHSTVDGVTRAFSGDGYERNLN--GSSSLNTSFAQPSGISL 780
            +   + +A    H +     +T + VT A +G  +   ++     +L+   + P  ++ 
Sbjct: 244 LVGYDLVVADTVNHLLRGVRLATGEVVTVAGTGRQWRSTVDDHAHDALSVDLSSPWDLAW 303

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD-----RDGMGSEVL 835
             D + I +A               G   L   DP+        G      +DG  +E  
Sbjct: 304 YDDRLVIAMA---------------GIHQLWWFDPVKRTTGMYAGSTVEARKDGPLAEAW 348

Query: 836 LQHPLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           L  P G+  + +G +++VADS    ++ ++      +   G+ + G  DG A  A L  P
Sbjct: 349 LAQPSGLSVSADGSRLWVADSETSAVRYVENGILTTAVGQGLFEFGHVDGPAAQALLQHP 408

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLD 919
            G+    +G++ IADT N  +R  D
Sbjct: 409 LGVCALPDGSVLIADTYNGAVRRYD 433


>gi|315500945|ref|YP_004079832.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal
           allergen [Micromonospora sp. L5]
 gi|315407564|gb|ADU05681.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Micromonospora sp. L5]
          Length = 610

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 178/499 (35%), Positives = 267/499 (53%), Gaps = 46/499 (9%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT        DL+GK+V+LDFWT+CCINC+HVL +L  LE KY D+   V
Sbjct: 8   PELRGRA-WLNTGGKAVTLADLRGKIVLLDFWTFCCINCLHVLDELRPLEDKYGDV-LVV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++EKD  A+  AV RYG+ HPV++D +M++W++    +WPT AVV P G ++
Sbjct: 66  IGVHSPKFEHEKDPAALAAAVERYGVHHPVLDDAEMDMWQQYAAKAWPTLAVVDPEGYVV 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           A +AGEGH + L  L++  +  +  K  L     P     + D     + L+FPGK A+ 
Sbjct: 126 ATMAGEGHAEGLARLIDELIAGHEAKGTLHRGEGPYVPPAEPD-----TVLRFPGK-ALP 179

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY----- 664
           +    L +SDS  + +V    DG  +V+   +G  G  DG    ATF  PQGL       
Sbjct: 180 LDGGNLLVSDSARHSLVELAADGETVVRRIGTGSRGRTDGPASAATFAEPQGLCLLPPHV 239

Query: 665 -NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG----SDYQGGEKGTSQLLNSPW 719
                  + VADT NH LR +   +  V T+AG G +      D+    +     L+SPW
Sbjct: 240 AEVAGYDVVVADTVNHLLRGVRLSSGEVVTVAGTGRQWRSTVDDHAHDARAVD--LSSPW 297

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +   +++V +AMAG HQ+W    +      ++G   E   +G    +   AQPSG+S
Sbjct: 298 DVAW--YDDRVVVAMAGIHQLWWFDPIKRTAGMYAGTTVEALRDGPLP-DVWMAQPSGLS 354

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S D   ++VADSE+S+IR ++    G    A G       LF FG  DG   + LLQHP
Sbjct: 355 VSADGSRLWVADSETSAIRWVS---DGEMHTAVG-----QGLFDFGHVDGPADQALLQHP 406

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV    +G + +AD+YN  +++ DP + +V T+A        DG      L+EP+ ++ 
Sbjct: 407 LGVCALPDGSVLIADTYNGAVRRFDPETGQVGTVA--------DG------LAEPSDLVL 452

Query: 900 AQNGNLFIADTNNNIIRYL 918
              G++ + ++  + +  L
Sbjct: 453 TGEGDVLVVESAAHRLTRL 471



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 827 RDGMGSEVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
           RDG   +V +  P G+  + +G +++VADS    I+ +       +   G+   G  DG 
Sbjct: 338 RDGPLPDVWMAQPSGLSVSADGSRLWVADSETSAIRWVSDGEMHTAVGQGLFDFGHVDGP 397

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           A  A L  P G+    +G++ IADT N  +R  D
Sbjct: 398 ADQALLQHPLGVCALPDGSVLIADTYNGAVRRFD 431


>gi|441145773|ref|ZP_20963891.1| hypothetical protein SRIM_07703 [Streptomyces rimosus subsp.
           rimosus ATCC 10970]
 gi|440620877|gb|ELQ83900.1| hypothetical protein SRIM_07703 [Streptomyces rimosus subsp.
           rimosus ATCC 10970]
          Length = 615

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 169/458 (36%), Positives = 257/458 (56%), Gaps = 37/458 (8%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   K  WLNT   ++   DL+G++V+LDFWT+CC+NC+HVL +L  LE+++
Sbjct: 11  RRARVRAPELGGKGGWLNTGGKEYTLADLRGRIVILDFWTFCCVNCLHVLDELRELEERH 70

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    ++GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+
Sbjct: 71  RDT-VVIIGVHSPKFVHEAEHQAVVDAVERYEVEHPVLDDPELATWKQYAVRAWPTLVVI 129

Query: 543 GPNGKLLAQLAGEGHRKDLDDLV---EAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP 599
            P G ++AQ AGEGH   ++ LV   EA     G  +  D   +P        P    + 
Sbjct: 130 DPEGYVVAQHAGEGHAHAIETLVGELEAEHEAKGTLRRGDGPYVP--------PEPVATD 181

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L+FPGK A+ +      +SD+  +++V    DG  +++   SGE G     F    F+ P
Sbjct: 182 LRFPGK-ALRLPGGTFLVSDTTRHQLVELAADGETVLRRIGSGERG-----FGADAFSEP 235

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLN 716
           QGLA       + VADT NHA+R  D     V T+AG G    +GS   G  +     L+
Sbjct: 236 QGLAL-LPDGKVAVADTVNHAIRTFDPETGEVATVAGTGKQWWQGSATSGPAREVD--LS 292

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SPWDV +    ++++IAMAG HQ+W +        A +G   E  ++G ++    FAQPS
Sbjct: 293 SPWDVAW--WQDRLWIAMAGVHQLWTYDPATETVEAAAGTTNEGLVDGPAA-EAWFAQPS 349

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           G++ + D   ++VADSE+S++R L+        +  G       LF FG RDG  ++ LL
Sbjct: 350 GLAAAGD--RLWVADSETSAVRWLDTDLVVHTAVGTG-------LFDFGHRDGDAAQALL 400

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           QHPLGV    +G + V+D+YNH +++ DPA+  VSTLA
Sbjct: 401 QHPLGVTALPDGSVAVSDTYNHALRRYDPATGEVSTLA 438



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 7/151 (4%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
           +F++P G++L PD  ++ VAD+ + +IR  + +TG    +AG         ++     G 
Sbjct: 231 AFSEPQGLALLPDG-KVAVADTVNHAIRTFDPETGEVATVAGTG----KQWWQGSATSGP 285

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
             EV L  P  V   ++ ++++A +  H++   DPA+  V   AG    G  DG A  A 
Sbjct: 286 AREVDLSSPWDVAWWQD-RLWIAMAGVHQLWTYDPATETVEAAAGTTNEGLVDGPAAEAW 344

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            ++P+G+  A +  L++AD+  + +R+LD +
Sbjct: 345 FAQPSGLAAAGD-RLWVADSETSAVRWLDTD 374



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 7/88 (7%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-- 882
           G+R G G++   + P G+    +G++ VAD+ NH I+  DP +  V+T+AG GK  ++  
Sbjct: 223 GER-GFGADAFSE-PQGLALLPDGKVAVADTVNHAIRTFDPETGEVATVAGTGKQWWQGS 280

Query: 883 --DGAALAAQLSEPAGIIEAQNGNLFIA 908
              G A    LS P  +   Q+  L+IA
Sbjct: 281 ATSGPAREVDLSSPWDVAWWQD-RLWIA 307


>gi|302864652|ref|YP_003833289.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Micromonospora aurantiaca ATCC 27029]
 gi|302567511|gb|ADL43713.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Micromonospora aurantiaca ATCC 27029]
          Length = 611

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 178/499 (35%), Positives = 267/499 (53%), Gaps = 46/499 (9%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT        DL+GK+V+LDFWT+CCINC+HVL +L  LE KY D+   V
Sbjct: 8   PELRGRA-WLNTGGKAVTLADLRGKIVLLDFWTFCCINCLHVLDELRPLEDKYGDV-LVV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++EKD  A+  AV RYG+ HPV++D +M++W++    +WPT AVV P G ++
Sbjct: 66  IGVHSPKFEHEKDPAALAAAVERYGVHHPVLDDAEMDMWQQYAAKAWPTLAVVDPEGYVV 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           A +AGEGH + L  L++  +  +  K  L     P     + D     + L+FPGK A+ 
Sbjct: 126 ATMAGEGHAEGLARLIDELIAGHEAKGTLHRGEGPYVPPAEPD-----TVLRFPGK-ALP 179

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY----- 664
           +    L +SDS  + +V    DG  +V+   +G  G  DG    ATF  PQGL       
Sbjct: 180 LDGGNLLVSDSARHSLVELAADGETVVRRIGAGSRGRTDGPASAATFAEPQGLCLLPPHV 239

Query: 665 -NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG----SDYQGGEKGTSQLLNSPW 719
                  + VADT NH LR +   +  V T+AG G +      D+    +     L+SPW
Sbjct: 240 AEVAGYDVVVADTVNHLLRGVRLSSGEVVTVAGTGRQWRSTVDDHAHDARAVD--LSSPW 297

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +   +++V +AMAG HQ+W    +      ++G   E   +G    +   AQPSG+S
Sbjct: 298 DVAW--YDDRVVVAMAGIHQLWWFDPIKRTAGMYAGTTVEALRDGPLP-DVWMAQPSGLS 354

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S D   ++VADSE+S+IR +   + G    A G       LF FG  DG   + LLQHP
Sbjct: 355 VSADGSRLWVADSETSAIRWV---SDGEMHTAVG-----QGLFDFGHVDGPADQALLQHP 406

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV    +G + +AD+YN  +++ DP + +V T+A        DG      L+EP+ ++ 
Sbjct: 407 LGVCALPDGSVLIADTYNGAVRRFDPETGQVGTVA--------DG------LAEPSDLVL 452

Query: 900 AQNGNLFIADTNNNIIRYL 918
              G++ + ++  + +  L
Sbjct: 453 TGEGDVLVVESAAHRLTRL 471



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 827 RDGMGSEVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
           RDG   +V +  P G+  + +G +++VADS    I+ +       +   G+   G  DG 
Sbjct: 338 RDGPLPDVWMAQPSGLSVSADGSRLWVADSETSAIRWVSDGEMHTAVGQGLFDFGHVDGP 397

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           A  A L  P G+    +G++ IADT N  +R  D
Sbjct: 398 ADQALLQHPLGVCALPDGSVLIADTYNGAVRRFD 431


>gi|269796827|ref|YP_003316282.1| thiol-disulfide isomerase-like thioredoxin [Sanguibacter keddieii
           DSM 10542]
 gi|269099012|gb|ACZ23448.1| thiol-disulfide isomerase-like thioredoxin [Sanguibacter keddieii
           DSM 10542]
          Length = 634

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 249/459 (54%), Gaps = 38/459 (8%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT  +     DL+GK+VVLDFWT+CC+NC+HVL +L  LE+ ++D    +VGVHS KF
Sbjct: 24  WLNTGGVDVTLADLRGKIVVLDFWTFCCVNCLHVLDELRELEEAHRDE-VVIVGVHSPKF 82

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D  A+  AV RY + HPV++D D+  W      +WPT  VV P G ++A +AGEGH
Sbjct: 83  VHEADPVALAAAVDRYEVRHPVLDDPDLVTWSAYTARAWPTLVVVDPEGYVVAHMAGEGH 142

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
              L+ LV         ++L++      +L + + P +   P    L+FP  + I + + 
Sbjct: 143 ASTLEILV---------RELVEEHSAKGTLHRGSGPYVPAEPTPGTLRFPAAV-IALESG 192

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNL 670
            L ++D+ H+ +     DG  +V+   SGE GL DG   DATF+ P GL       +  L
Sbjct: 193 NLLVADAGHHSLAELAADGETLVRRIGSGERGLSDGGRQDATFSEPNGLCLVPATLRDQL 252

Query: 671 LY---VADTENHALREIDFVNDTVRTLAGNGTK----GSDYQGGEK-------GTSQLLN 716
            Y   VADT NHALR +   +  V T+AG G +    G++    E             L 
Sbjct: 253 GYDVLVADTVNHALRGVRLSDGHVTTVAGTGDQLMVGGAENVVPETTAPDATPALRHRLT 312

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SPWDV +        +AMAG H +W    V GV     G   E  L+G  +    FAQPS
Sbjct: 313 SPWDVVWSERLGAFLVAMAGNHSLWTFDPVAGVVEQVGGTQNEGLLDGPLA-QAWFAQPS 371

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           G+S+ PD   +++AD+E+S++R +++   GS  +     +    LF FG RDG  ++ LL
Sbjct: 372 GLSVGPDG-SVWLADAETSALRRVDVADDGSATITS---LVGQGLFDFGHRDGAAAQALL 427

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
           QHPLGV    +G + V D+YN  +++ DPA++ V+TL G
Sbjct: 428 QHPLGVAALPDGSVVVTDTYNGALRRYDPATDEVTTLVG 466



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM---- 785
           + +A AG H + E +  DG T        ER L+     + +F++P+G+ L P  +    
Sbjct: 194 LLVADAGHHSLAELAA-DGETLVRRIGSGERGLSDGGRQDATFSEPNGLCLVPATLRDQL 252

Query: 786 --EIYVADSESSSIRALNLKTG--------GSRLLAGG-DPIFPDNLFKFGDRDGMGSEV 834
             ++ VAD+ + ++R + L  G        G +L+ GG + + P+            +  
Sbjct: 253 GYDVLVADTVNHALRGVRLSDGHVTTVAGTGDQLMVGGAENVVPETTAP-------DATP 305

Query: 835 LLQHPLG-----VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA 889
            L+H L      V+  + G   VA + NH +   DP +  V  + G    G  DG    A
Sbjct: 306 ALRHRLTSPWDVVWSERLGAFLVAMAGNHSLWTFDPVAGVVEQVGGTQNEGLLDGPLAQA 365

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
             ++P+G+    +G++++AD   + +R +D+  +
Sbjct: 366 WFAQPSGLSVGPDGSVWLADAETSALRRVDVADD 399



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P  V   ++G + VAD+ +H + +L      +    G G+ G  DG    A  SEP 
Sbjct: 180 LRFPAAVIALESGNLLVADAGHHSLAELAADGETLVRRIGSGERGLSDGGRQDATFSEPN 239

Query: 896 GI------IEAQNG-NLFIADTNNNIIRYLDLN 921
           G+      +  Q G ++ +ADT N+ +R + L+
Sbjct: 240 GLCLVPATLRDQLGYDVLVADTVNHALRGVRLS 272


>gi|170755613|ref|YP_001782372.1| NHL repeat-containing protein [Clostridium botulinum B1 str. Okra]
 gi|429244666|ref|ZP_19208103.1| NHL repeat-containing protein [Clostridium botulinum CFSAN001628]
 gi|169120825|gb|ACA44661.1| NHL repeat protein [Clostridium botulinum B1 str. Okra]
 gi|428758305|gb|EKX80740.1| NHL repeat-containing protein [Clostridium botulinum CFSAN001628]
          Length = 467

 Score =  289 bits (739), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 179/493 (36%), Positives = 275/493 (55%), Gaps = 45/493 (9%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FP  ++WL        + LK +V++LDFWT+CCINC+HV+ DL++LE+KYK+    V+
Sbjct: 16  PNFPMTIEWLGAKRTNLDK-LKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKN-KLQVI 73

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF  EK+ +AI NA+ +YGI+HPVVND + ++W    VN+WPTF ++ P G    
Sbjct: 74  GVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFT 133

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP---LSLEKDNDPRLFTSPLKFPGKLA 607
            ++GEG+R+ LD ++   + ++      DN   P   + LE   +   +     +P K++
Sbjct: 134 MVSGEGNRELLDQIIGDTIEYF------DNINWPDENIILENKCEKEEYM----YPSKIS 183

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           I+  +  +  S+   NRIV+ D +   I  IGSS + GL+DG F +A F  P+GL +   
Sbjct: 184 IN-EDGLIAFSEKGKNRIVILDQNLEKIKTIGSS-KYGLKDGDFKEAQFKAPEGLRF--I 239

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +N +YVADTENH +RE D   + V+T+AGNG K           +  LNSPWD+  + + 
Sbjct: 240 ENKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDL--EILK 297

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           + +YIAMAG HQIW+++  D    +  G G E N+   S      AQ S +       ++
Sbjct: 298 DCIYIAMAGNHQIWKYNMKDKSIESHIGTGGE-NIRDGSFDKCLLAQTSALCYDGK-KKL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y  DSE+SSIR  +L+      L G        LF FG++ G     +LQHPL +   K+
Sbjct: 356 YFVDSETSSIRYADLEENKVHTLIG------KGLFYFGNKVGSFENTMLQHPLDLK-YKD 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +Y+AD+YN++I K D  + +V  +    K G          L+EP GI   ++  ++I
Sbjct: 409 NILYIADTYNNRIVKADILNKKVEII----KRG----------LNEPNGIAIYEDS-IYI 453

Query: 908 ADTNNNIIRYLDL 920
            +TN+  I  + +
Sbjct: 454 CNTNDGKIEKISI 466



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQPSGISLSPD 783
           I  K+Y+A    H I E      + +  +G+G +    +    +LN S   P  + +  D
Sbjct: 239 IENKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKD 298

Query: 784 FMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
              IY+A + +  I   N+K     S +  GG+ I          RDG   + LL     
Sbjct: 299 C--IYIAMAGNHQIWKYNMKDKSIESHIGTGGENI----------RDGSFDKCLLAQTSA 346

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIE 899
           +      ++Y  DS    I+  D   N+V TL G G   F  K G+     L  P  + +
Sbjct: 347 LCYDGKKKLYFVDSETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQHPLDL-K 405

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPEL 927
            ++  L+IADT NN I   D+  ++ E+
Sbjct: 406 YKDNILYIADTYNNRIVKADILNKKVEI 433



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
            F  P G+    +  +IYVAD+E+  IR  +L+    + +AG        + K     G 
Sbjct: 229 QFKAPEGLRFIEN--KIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAK-----GD 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
              V L  P  +   K+  IY+A + NH+I K +     + +  G G    +DG+     
Sbjct: 282 ALNVSLNSPWDLEILKDC-IYIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCL 340

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           L++ + +       L+  D+  + IRY DL  EE ++ TL  KG+
Sbjct: 341 LAQTSALCYDGKKKLYFVDSETSSIRYADL--EENKVHTLIGKGL 383


>gi|254383375|ref|ZP_04998727.1| NHL repeat containing protein [Streptomyces sp. Mg1]
 gi|194342272|gb|EDX23238.1| NHL repeat containing protein [Streptomyces sp. Mg1]
          Length = 607

 Score =  289 bits (739), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 178/497 (35%), Positives = 258/497 (51%), Gaps = 40/497 (8%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE   +  WLNT        DL+G++V+LDFWT+CCINC+HVL +L  LE+K+
Sbjct: 9   RRARVRAPELIGEGGWLNTGGKDLTLADLRGRIVILDFWTFCCINCLHVLDELRELEEKH 68

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    ++GVHS KF +E +  A+ +AV RY + HPV++D  +  W++  V +WPT  V+
Sbjct: 69  RDT-VVIIGVHSPKFVHEAEHAAVVDAVERYEVHHPVLDDPKLATWKQYAVRAWPTLVVI 127

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   L  LV      +  K  L     P        P    + L+F
Sbjct: 128 DPEGYIVAQHAGEGHAHALARLVAELEAEHETKGTLRRGDGPYVA-----PEAVATDLRF 182

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK A+ + +    +SDS  +++V    D   +V+   SGE G     F    F+ PQGL
Sbjct: 183 PGK-ALLLPSGNFLVSDSTRHQLVELAADAESVVRRIGSGERG-----FGPDAFSEPQGL 236

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPW 719
           A     +++ VADT NHALR  D    +V T+AG G +   +QG       L   L+SPW
Sbjct: 237 ALLPDGSVV-VADTVNHALRRFDPATGSVETVAGTGRQW--WQGSPTSGPALEVDLSSPW 293

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +     KV+IAMAG HQ+W            +G   E  ++G ++    FAQPSG++
Sbjct: 294 DVAW--WQGKVWIAMAGVHQLWTWDPQTRTVEVAAGTTNEGLVDGPAA-EAWFAQPSGLA 350

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
            + D   ++VAD E+S++R L     G   L          LF FG RDG   + LLQHP
Sbjct: 351 ATED--RLWVADPETSALRYLEAAPDGEGYLV--TSAVGTGLFDFGHRDGDAGQALLQHP 406

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV    +G + V D+YNH +++ DPA+ RV+T              LA  L EP+  + 
Sbjct: 407 LGVTALPDGSVAVCDTYNHALRRFDPATGRVTT--------------LATDLREPSDAVL 452

Query: 900 AQNGNLFIADTNNNIIR 916
           A N  + +    + + R
Sbjct: 453 AGNDIVVVESARHRLTR 469


>gi|386384782|ref|ZP_10070129.1| redoxin domain-containing protein [Streptomyces tsukubaensis
           NRRL18488]
 gi|385667750|gb|EIF91146.1| redoxin domain-containing protein [Streptomyces tsukubaensis
           NRRL18488]
          Length = 591

 Score =  288 bits (738), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 172/477 (36%), Positives = 264/477 (55%), Gaps = 49/477 (10%)

Query: 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNA 509
           DL+GK+VVLDFWT+CCINC+HVL +L  LE+K++D    +VGVHS KF +E D  A+ +A
Sbjct: 30  DLRGKIVVLDFWTFCCINCLHVLDELRELEEKHRDT-LVIVGVHSPKFVHEADHRAVVDA 88

Query: 510 VLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           V RY ++HPV++D ++  W++  V +WPT  V+ P G ++AQ AGEGH   +  LV    
Sbjct: 89  VERYQVAHPVLDDPELVTWKQYAVRAWPTLVVIDPEGYVVAQHAGEGHAHAIARLVAELE 148

Query: 570 LFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTD 629
             +  K  L     P        P    + L+FPGK+ + + +  L +SDS  +++V  +
Sbjct: 149 EEHAAKGTLRRGDGPYVA-----PEPVATDLRFPGKVLV-LPSGNLLVSDSTRHQLVELE 202

Query: 630 LDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND 689
            DG  +V+         R G  D+  FN PQGLA       + VADT NH +R  D  + 
Sbjct: 203 PDGETVVR---------RIGGADE--FNEPQGLAL-LPDGRVAVADTVNHRIRAYDPSSG 250

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQL---LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
            V TLAG G +   +QG       L   L+SPWD+ +   +  ++IAMAG HQ+W +   
Sbjct: 251 AVETLAGTGKQW--WQGSPAEGPALTVDLSSPWDLAW--WDGLLWIAMAGTHQLWTYDPE 306

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
            G  R  +G   E  ++G +     FAQPSG++++ D   +++ADSE+S++R +  + G 
Sbjct: 307 AGTVRRAAGTTNEGLVDGPAD-EAWFAQPSGLAVAADGERLWIADSETSALRWIG-RDGS 364

Query: 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
                G        LF FG RDG  ++ L QHPLGV    +G + V D+YNH +++ DPA
Sbjct: 365 VHSAVG------TGLFDFGHRDGDAAQALFQHPLGVTALPDGSVAVCDTYNHALRRYDPA 418

Query: 867 SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           + +V+T              LA +L EP+G + A +G++ + ++  + +  L L +E
Sbjct: 419 TGQVTT--------------LATELREPSGAVLA-DGDIVVVESAAHRLTRLRLPEE 460


>gi|295394954|ref|ZP_06805167.1| NHL repeat containing protein [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972287|gb|EFG48149.1| NHL repeat containing protein [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 655

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 176/462 (38%), Positives = 248/462 (53%), Gaps = 41/462 (8%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           W+NT        DL+GK+V+LDFWT+CCINC+HVL +L  LE+KY D+    +GVHS KF
Sbjct: 36  WINTGGKNLSLEDLRGKIVLLDFWTFCCINCLHVLDELRPLEEKYADV-LVTIGVHSPKF 94

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           + E+++EA+  AV RY + H V++D ++  W+     +WPT  V+ P G ++A ++GEGH
Sbjct: 95  EFEREIEAVDRAVERYQVEHIVLDDPNLETWKAYTARAWPTLVVIDPEGYIVASMSGEGH 154

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
              L  L+E     +  K  L     P       +  LF     +PGK+ + + + RL +
Sbjct: 155 TSGLISLIEEVAAEHEAKGTLRRGDAPYVPPAPREGDLF-----YPGKV-VRLDDGRLIV 208

Query: 618 SDSNHNRIVVTDLDG-NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY------NAKKNL 670
           +DS H+   + D DG N + +IG SGE G  DG F  A F+ P G+A             
Sbjct: 209 ADSGHHSYALYDSDGANLLGRIG-SGERGNADGDFATAQFSEPGGVAQLPPEIAQQVGYH 267

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTK----GSDYQGGEKG---------TSQLLNS 717
           L  ADT NH LR I+    TV T+AG G +     SD    + G         T+  L+S
Sbjct: 268 LVAADTVNHTLRGINLETQTVTTVAGTGEQYMVGASDNVPDQPGFFGRYDGPATAVKLSS 327

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE--RNLNGSSS---LNTSF 772
           PWDV Y P    V IAMAG H +W    V G     SG   E  R+ + +++   L+  F
Sbjct: 328 PWDVVYAPKTSNVVIAMAGNHTMWTFDPVAGTVAHISGSLNEGLRDTSAAATPFDLDEWF 387

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
           AQPSG+ L+ D   ++VADSE+S++R L+  TG      G        LF FG +DG   
Sbjct: 388 AQPSGVRLASD-GNVWVADSETSALRKLDPSTGAVTSYVG------VGLFDFGFQDGPAE 440

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
              LQHPLG     +G + +AD+YN  I++ DP +N VSTLA
Sbjct: 441 SARLQHPLGALELPDGTVAIADTYNGAIRRFDPQTNTVSTLA 482



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 22/186 (11%)

Query: 755 GDGYERNLNGSSSLNTSFAQPSGIS-LSPDFME-----IYVADSESSSIRALNLKT---- 804
           G G   N +G  +    F++P G++ L P+  +     +  AD+ + ++R +NL+T    
Sbjct: 231 GSGERGNADGDFA-TAQFSEPGGVAQLPPEIAQQVGYHLVAADTVNHTLRGINLETQTVT 289

Query: 805 ----GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHK 859
                G + + G     PD    FG  DG  + V L  P  V Y  K   + +A + NH 
Sbjct: 290 TVAGTGEQYMVGASDNVPDQPGFFGRYDGPATAVKLSSPWDVVYAPKTSNVVIAMAGNHT 349

Query: 860 IKKLDPASNRVSTLAGIGKAGFKDGAALAA------QLSEPAGIIEAQNGNLFIADTNNN 913
           +   DP +  V+ ++G    G +D +A A         ++P+G+  A +GN+++AD+  +
Sbjct: 350 MWTFDPVAGTVAHISGSLNEGLRDTSAAATPFDLDEWFAQPSGVRLASDGNVWVADSETS 409

Query: 914 IIRYLD 919
            +R LD
Sbjct: 410 ALRKLD 415



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L +P  V    +G++ VADS +H     D     +    G G+ G  DG    AQ SEP 
Sbjct: 192 LFYPGKVVRLDDGRLIVADSGHHSYALYDSDGANLLGRIGSGERGNADGDFATAQFSEPG 251

Query: 896 GI------IEAQNG-NLFIADTNNNIIRYLDLNKE 923
           G+      I  Q G +L  ADT N+ +R ++L  +
Sbjct: 252 GVAQLPPEIAQQVGYHLVAADTVNHTLRGINLETQ 286


>gi|297193207|ref|ZP_06910605.1| NHL repeat containing protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720478|gb|EDY64386.1| NHL repeat containing protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 603

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 164/447 (36%), Positives = 249/447 (55%), Gaps = 38/447 (8%)

Query: 432 EFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           E   K  WLNT   +    DL+G++V+LDFWT+CCINC+HVL +L  LE+K++D    ++
Sbjct: 23  ELIGKGGWLNTGEKELTLADLRGRIVILDFWTFCCINCLHVLDELRELEEKHRDT-VVII 81

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  V+ P G ++A
Sbjct: 82  GVHSPKFVHEAEHQAVVDAVERYQVHHPVLDDPELATWKQYAVRAWPTLVVIDPEGYVVA 141

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDI 610
           Q AGEGH   ++ LVE     +  K  L     P        P    + L+FPGK+ + +
Sbjct: 142 QHAGEGHAHAIEKLVEELEAEHAAKGTLRRGDGPYVA-----PEPVATDLRFPGKVLL-L 195

Query: 611 LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
            +  L +SDS  +++V    DG  +V+    GE            FN PQGLA       
Sbjct: 196 PSGNLLVSDSTRHQLVEMAADGESVVRRIGDGE------------FNEPQGLAL-LPDGR 242

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPWDVCYKPIN 727
           + VADT NHA+R  D    ++  LAG G +   +QG       L   L+SPWDV +    
Sbjct: 243 VAVADTVNHAIRAYDPATGSIELLAGTGKQW--WQGSPTSGPALEVALSSPWDVAW--WE 298

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +++IAMAG HQ+W +    G  +  +G   E  ++G ++    FAQPSG++ + D   +
Sbjct: 299 GRLWIAMAGVHQLWTYDPEQGTVQVAAGTTNEGLVDGPAA-EAWFAQPSGLAATED--RL 355

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           ++ADSE+S++R ++        +  G       LF FG RDG   + LLQHPLGV    +
Sbjct: 356 WIADSETSAVRWIDRDLRVHTAVGTG-------LFDFGHRDGDAGQALLQHPLGVTALPD 408

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLA 874
           G + V+D+YNH +++ DPA+  V+TLA
Sbjct: 409 GSVAVSDTYNHALRRFDPATGEVTTLA 435



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 7/148 (4%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F +P G++L PD   + VAD+ + +IRA +  TG   LLAG         ++     G  
Sbjct: 229 FNEPQGLALLPDG-RVAVADTVNHAIRAYDPATGSIELLAGTG----KQWWQGSPTSGPA 283

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
            EV L  P  V   + G++++A +  H++   DP    V   AG    G  DG A  A  
Sbjct: 284 LEVALSSPWDVAWWE-GRLWIAMAGVHQLWTYDPEQGTVQVAAGTTNEGLVDGPAAEAWF 342

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           ++P+G+   ++  L+IAD+  + +R++D
Sbjct: 343 AQPSGLAATED-RLWIADSETSAVRWID 369


>gi|390369862|ref|XP_798415.2| PREDICTED: NHL repeat-containing protein 2-like [Strongylocentrotus
           purpuratus]
          Length = 322

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/318 (48%), Positives = 210/318 (66%), Gaps = 13/318 (4%)

Query: 435 AKLDWLNTA-PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGV 492
           A L+W NT+ PL F+ +L+GK+VVLDF+TYCCINCMH+LPDLE LE+KY  +    VVGV
Sbjct: 8   AGLEWFNTSGPLSFKSNLQGKLVVLDFFTYCCINCMHILPDLEALEEKYSVEDGVVVVGV 67

Query: 493 HSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQL 552
           HSAKF+NEK    I+NA+LRY I HPVVND D  +W +L +  WPT  +VGP+G+ +  +
Sbjct: 68  HSAKFENEKVSANIKNAILRYNIHHPVVNDHDAVMWNDLNIQCWPTLLIVGPSGEPILSI 127

Query: 553 AGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILN 612
            GEGHR  L ++V+ +L  +  K  L    LP+   KD+   L  SPL +PGK+  +   
Sbjct: 128 IGEGHRDILFEVVQLSLDHFKSK--LSPQSLPVVALKDS---LVDSPLLYPGKVTTNPEG 182

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSG-EEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
             L +SD+ HNR+++  LDG  +VQ    G E G  DG + +A F+ PQGL +   ++++
Sbjct: 183 TLLAVSDTGHNRVIIVALDG--VVQHCIGGPETGFNDGLYQEARFHSPQGLCW--AQDVI 238

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV- 730
           YVADTENHA+R+ID     V T+AG G +G D+ G  +GT Q+++SPWDV   P NE V 
Sbjct: 239 YVADTENHAIRKIDLKEKRVTTIAGTGEQGVDWYGAGRGTEQVISSPWDVVLGPPNEDVL 298

Query: 731 YIAMAGQHQIWEHSTVDG 748
           +IAMAG HQ+W     DG
Sbjct: 299 FIAMAGTHQLWGLFLSDG 316



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFG 825
           S +++    P  ++ +P+   + V+D+  + +  + L       + G +  F D L++  
Sbjct: 164 SLVDSPLLYPGKVTTNPEGTLLAVSDTGHNRVIIVALDGVVQHCIGGPETGFNDGLYQ-- 221

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG---FK 882
                  E     P G+ C     IYVAD+ NH I+K+D    RV+T+AG G+ G   + 
Sbjct: 222 -------EARFHSPQGL-CWAQDVIYVADTENHAIRKIDLKEKRVTTIAGTGEQGVDWYG 273

Query: 883 DGAALAAQLSEPAGII 898
            G      +S P  ++
Sbjct: 274 AGRGTEQVISSPWDVV 289


>gi|332668794|ref|YP_004451801.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
            allergen [Cellulomonas fimi ATCC 484]
 gi|332337831|gb|AEE44414.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
            allergen [Cellulomonas fimi ATCC 484]
          Length = 639

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 213/672 (31%), Positives = 317/672 (47%), Gaps = 96/672 (14%)

Query: 439  WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
            WLNT        DL+GKVVVLDFWT+CC+NC+HVL +L  LE++++D+   VVGVHS KF
Sbjct: 22   WLNTGGKDVTLADLRGKVVVLDFWTFCCVNCLHVLDELRELEEQHRDV-LVVVGVHSPKF 80

Query: 498  DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
             +E D  A+  AV RY + HPV++D  +  W      +WPT  V+ P G ++AQ+AGEGH
Sbjct: 81   VHEADPVALAAAVERYEVHHPVLDDPQLVTWSAYTARAWPTLVVIDPEGYVVAQMAGEGH 140

Query: 558  RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
            R +L+ LV   +  +  K          +L + + P +  +P    L+FP K A+ +   
Sbjct: 141  RHNLEVLVRDLVAEHDAKG---------TLHRGHGPYVPPAPVAGTLRFPAK-AVALPGG 190

Query: 614  RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNL 670
             L ++D+ H+ +     DG  +V+   SGE G  DG  D+A F+ P GLA      +  L
Sbjct: 191  TLLVADAGHHGLAELAADGETLVRRIGSGERGFVDGGPDEARFSEPNGLALVPDGLRATL 250

Query: 671  LY---VADTENHALREIDFVNDTVRTLAGNGTK------------GSDYQGGEKGTSQLL 715
             Y   VADT NHALR +   + +V T+AG G +            G+            L
Sbjct: 251  GYDVLVADTVNHALRGVRLSDGSVTTVAGTGEQLMVGAADNVRGGGTGAGYDGPARDVRL 310

Query: 716  NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV-TRAFSGDGYERNLNGSSSLNTSFAQ 774
            +SPWDV + P+     +AMAG H +W   T DG   R  +G   E  L+G       FAQ
Sbjct: 311  SSPWDVAWSPVLGAFVVAMAGNHTLW---TFDGTDVRHVAGTMNEGLLDGPGE-GAWFAQ 366

Query: 775  PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
            PSG+S+ PD   ++VADSE+S++R L+   G      G      + LF FG RDG   E 
Sbjct: 367  PSGLSVGPDG-RVWVADSETSALRWLDPADGTVGTAVG------EGLFDFGHRDGRADEA 419

Query: 835  LLQHPLGVYCAKNGQIYVADSYNHKIKK-LDPASNRVSTLAGIGKAGFKDGAALAAQLSE 893
             +QHPLGV    +G + VAD+YN  +++ + PA++          AG  +   +A+ L+E
Sbjct: 420  RMQHPLGVAALPDGSVLVADTYNGAVRRYVPPAADE--------PAGAGEVTTVASDLAE 471

Query: 894  PAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSS 953
            P+G++        +A         LD+   E                   +  R+ R + 
Sbjct: 472  PSGLV-------VVARDGAGSSGALDVLVVE------------------SAAHRITRVTL 506

Query: 954  PDAQTIVVDGGLSNEGNIYLKISLPE---EYHFSKEARSKFSVDVEPENAVIIDPLDGNL 1010
            P     VVDGG          ++  E   +  F+  A  K+     P   + +      L
Sbjct: 507  PAGAGQVVDGGAHRTQRPVTDLAAGEVRLDVVFTPAAGQKYDDRYGPSTRLQVSSTPPGL 566

Query: 1011 SPEGSA----VLHFRRMSPSVSTGRI-------SCKVYYCKEDEVCLYKPLLFEVPFQEE 1059
              +G+     +    R+ P+V  G +       SC      E   C      + VP +  
Sbjct: 567  LLDGAGDDVPLTRTLRLDPAVGEGVLHVTAHAASCDADPAVEYPACHLNAQDWGVPVR-- 624

Query: 1060 VPNSPPAEITLP 1071
            V +  PA +TLP
Sbjct: 625  VVDGAPATLTLP 636


>gi|380016202|ref|XP_003692077.1| PREDICTED: membrane-associated protein Hem-like [Apis florea]
          Length = 1439

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/404 (40%), Positives = 220/404 (54%), Gaps = 41/404 (10%)

Query: 395 RPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKG 453
           R S E       Q E + + +   S+   R     + +F A L+W N T  L   R L G
Sbjct: 18  RGSLELLLDRKEQKELVLRHIKTFSNKNTR-----IADFQAGLEWFNVTEELSLYRHLNG 72

Query: 454 KVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP-FTVVGVHSAKFDNEKDLEAIRNAVLR 512
           K+++LDF+TYCCINCMH+LPDL+ LEK++       VVGVHSAKF NE+D + + +A+ R
Sbjct: 73  KIIILDFFTYCCINCMHILPDLDDLEKRFSITDGLVVVGVHSAKFSNERDSKRLLSAIQR 132

Query: 513 YGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572
           Y I HPVVND  ++ WR LG++ WPT  ++GP G+LLA   GEGH+ +L   VE AL ++
Sbjct: 133 YNIKHPVVNDKTLSAWRNLGISCWPTLLMIGPTGELLAVFVGEGHKDELILFVEVALTYF 192

Query: 573 GKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR----LFISDSNHNRIVVT 628
                +    LPL LE      +    L FP KL  +I  N     L I+D+ +NRI++ 
Sbjct: 193 KSLNKISKNNLPLQLECHLLAAVDNRNLLFPSKL--EIFQNEQGENLIIADTGNNRILII 250

Query: 629 DLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN 688
           D  GN    IG S  +  RDG F++A FN PQG+        +YVAD ENHA+R+ID + 
Sbjct: 251 DTKGNIQHVIGGSNPD-FRDGDFENARFNAPQGVC--ILDTFVYVADNENHAIRKIDLIK 307

Query: 689 DTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY---------IAMAGQHQ 739
             V T+ G G +G DY GG+ G +Q+L+SPWD+    I E  Y         IAMAG HQ
Sbjct: 308 KIVTTVVGTGIQGHDYVGGKIGKNQILSSPWDL---AIYEHEYNKNSIPILLIAMAGTHQ 364

Query: 740 IWEHSTVD-----------GVTRAFSGDGYERNLNG--SSSLNT 770
           IW     D           G   A  G G E N N    SS+ T
Sbjct: 365 IWALFLKDTIWWKKREYKAGTCIAIVGSGREENRNNFLESSIKT 408



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           + +AD+ ++ I  ++ K     ++ G +P F         RDG         P GV C  
Sbjct: 237 LIIADTGNNRILIIDTKGNIQHVIGGSNPDF---------RDGDFENARFNAPQGV-CIL 286

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
           +  +YVAD+ NH I+K+D     V+T+ G G  G
Sbjct: 287 DTFVYVADNENHAIRKIDLIKKIVTTVVGTGIQG 320


>gi|397779898|ref|YP_006544371.1| NHL repeat-containing protein 2 [Methanoculleus bourgensis MS2]
 gi|396938400|emb|CCJ35655.1| NHL repeat-containing protein 2 [Methanoculleus bourgensis MS2]
          Length = 483

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 173/490 (35%), Positives = 267/490 (54%), Gaps = 27/490 (5%)

Query: 431 PEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           P+ PA L+WLNT  PL    +L G++V+L F T+ C NCM ++P+L  LE+ + ++   V
Sbjct: 7   PDLPAGLEWLNTDHPLSIS-ELAGRIVLLCFGTFACSNCMRMVPELRRLEEDHPEL--VV 63

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           + VH+  F++      ++ A+   GI +PVV D D  LW+  G+ +WPTF ++ P G +L
Sbjct: 64  IEVHTPGFESPAVTGNLQEAIRCAGIDYPVVIDHDHLLWQAFGIRNWPTFVLIDPEGHVL 123

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            + AGEG    L+  ++     + ++ +L    L  +           + L  P K+  D
Sbjct: 124 GKTAGEGLYGRLNPRIDRIARDFEQRGMLVKKRLQFAAAP-------ATVLYHPDKITAD 176

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
               RLFISDS H+RI+V   DG  +  IG+ G  G  DGS  +A F  P+GLA++ +  
Sbjct: 177 HAGMRLFISDSGHHRIIVASRDGAILGVIGT-GAPGNADGSSSEAAFYLPEGLAFDEEAG 235

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           +LYVAD  NH +R++ + +  V T+AG G +      G  GT   LN+P D+    + + 
Sbjct: 236 VLYVADAGNHTIRQVSWPDLRVETVAGTGLEAPSPGEGGPGTGVALNAPRDLAL--MGDY 293

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           +YIAMAG +Q+W           ++G G E  L        +FA PSGI    D   +Y+
Sbjct: 294 LYIAMAGANQVWRMDLATHTLEPYAGSGLE-GLTDGPLREAAFAGPSGIVT--DGEALYI 350

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           ADS +S+IR  +++ G    L G       +L  FGD D +     + HP+G+  +  G 
Sbjct: 351 ADSGASAIR--HIQRGVVETLIG------HSLEDFGDLDTIARMARIHHPMGI-ASHQGL 401

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           +Y+AD+YNHKIK+LDP +  V T  G G  G+++G +  A+LSEP G++    G  +IAD
Sbjct: 402 LYIADTYNHKIKELDPGTGWVLTRVGSGDRGYQNGVSGDARLSEPGGLVNL-GGLWYIAD 460

Query: 910 TNNNIIRYLD 919
           T N+ +R  D
Sbjct: 461 TGNHAVRVYD 470


>gi|453054414|gb|EMF01867.1| redoxin domain-containing protein [Streptomyces mobaraensis NBRC
           13819 = DSM 40847]
          Length = 608

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 168/457 (36%), Positives = 253/457 (55%), Gaps = 30/457 (6%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R+     PE      WLNT   +     L+G++V+LDFWT+CC+NC+HVL +L  LE+K+
Sbjct: 9   RRPRVRAPELVGAGGWLNTGGEELSLAALRGRIVILDFWTFCCVNCLHVLDELRELEEKH 68

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    +VGVHS KF +E + +A+ +AV RY + HPV++D ++  W++  V +WPT  VV
Sbjct: 69  RDT-TVIVGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPELVTWKQYAVRAWPTLVVV 127

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
            P G ++AQ AGEGH   L+ LV      +  K  L     P        P      L+F
Sbjct: 128 DPEGYVVAQHAGEGHAHALEALVSELEAEHEAKGTLRRGDTPYVA-----PEPVAGELRF 182

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           PGK A+ +      +SD+  +++V    DG  +V+   +GE G  D     A F+ PQGL
Sbjct: 183 PGK-ALALPGGGYLVSDTTRHQLVELAADGETVVRRIGTGERGFGDSP---ARFSEPQGL 238

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLLNSPW 719
           A       + VADT NHALR  D     V TLAG G    +G+  +G  +  +  L+SPW
Sbjct: 239 AL-LPDGRVAVADTVNHALRVYDPETHEVGTLAGTGRQWWQGAATEGPAREVA--LSSPW 295

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           D+ +    +++++AMAG HQ+W +    G     +G   E  ++G ++    FAQPSG++
Sbjct: 296 DLAW--FADRLWVAMAGVHQLWAYDPAAGTVGVAAGTTNEGLVDGPAA-EAWFAQPSGLA 352

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
            + D   ++VADSE+S++R +     G   R   G        LF FG RDG  ++ L Q
Sbjct: 353 AAED--RLWVADSETSALRYVERDGDGFAVRTAVG------TGLFDFGHRDGDAAQALFQ 404

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           HPLGV    +G + V+D+YNH +++ DPA+ +V+TLA
Sbjct: 405 HPLGVTALPDGSVAVSDTYNHALRRYDPATGQVTTLA 441



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 7/152 (4%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F++P G++L PD   + VAD+ + ++R  + +T     LAG         ++    +G  
Sbjct: 232 FSEPQGLALLPD-GRVAVADTVNHALRVYDPETHEVGTLAGTG----RQWWQGAATEGPA 286

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
            EV L  P  +    + +++VA +  H++   DPA+  V   AG    G  DG A  A  
Sbjct: 287 REVALSSPWDLAWFAD-RLWVAMAGVHQLWAYDPAAGTVGVAAGTTNEGLVDGPAAEAWF 345

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           ++P+G+  A++  L++AD+  + +RY++ + +
Sbjct: 346 AQPSGLAAAED-RLWVADSETSALRYVERDGD 376



 Score = 43.1 bits (100), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK- 882
           FGD     SE     P G+    +G++ VAD+ NH ++  DP ++ V TLAG G+  ++ 
Sbjct: 225 FGDSPARFSE-----PQGLALLPDGRVAVADTVNHALRVYDPETHEVGTLAGTGRQWWQG 279

Query: 883 ---DGAALAAQLSEP 894
              +G A    LS P
Sbjct: 280 AATEGPAREVALSSP 294



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P        G   V+D+  H++ +L      V    G G+ GF D  A   + SEP 
Sbjct: 180 LRFPGKALALPGGGYLVSDTTRHQLVELAADGETVVRRIGTGERGFGDSPA---RFSEPQ 236

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           G+    +G + +ADT N+ +R  D   E  E+ TL   G Q
Sbjct: 237 GLALLPDGRVAVADTVNHALRVYD--PETHEVGTLAGTGRQ 275


>gi|119961614|ref|YP_949427.1| NHL repeat-containing protein [Arthrobacter aurescens TC1]
 gi|403528903|ref|YP_006663790.1| NHL repeat-containing protein [Arthrobacter sp. Rue61a]
 gi|119948473|gb|ABM07384.1| putative NHL repeat protein [Arthrobacter aurescens TC1]
 gi|403231330|gb|AFR30752.1| NHL repeat-containing protein [Arthrobacter sp. Rue61a]
          Length = 657

 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 194/574 (33%), Positives = 284/574 (49%), Gaps = 89/574 (15%)

Query: 439 WLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       + L+GK+V+LDFWT+CCINC+HVL +L  LE+KY D+  TV GVHS KF
Sbjct: 21  WLNTGGKSLDLESLRGKIVLLDFWTFCCINCLHVLDELRPLEEKYSDVLVTV-GVHSPKF 79

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+ +AV RY I HPV++D ++  W+     +WPT  VV P G ++A L+GEGH
Sbjct: 80  EHEADPVALASAVERYEIHHPVLDDPELATWKAYTARAWPTLVVVDPEGYIVAHLSGEGH 139

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
              L  L+E  +  +  K          +L + N P +   P    L+FPGK A  + N 
Sbjct: 140 ADGLAVLLEELVAEHEAKG---------TLHRGNGPYVAPEPTSGTLRFPGK-ATQLPNG 189

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG-----------L 662
              + DS H+R+V    D   + ++  SG +G  DG  + A FN PQG           L
Sbjct: 190 NYLVVDSGHHRLVELRPDLETVERVIGSGTKGYLDGQSEIAQFNEPQGVTLLPSELAWKL 249

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG------------------TKGSDY 704
            Y+A      VADT NH LR +   +  V+TLAGNG                  T    +
Sbjct: 250 GYDA-----VVADTVNHRLRGVTLSSGYVQTLAGNGVQRLLDAGPARVTDTGAGTWSEHH 304

Query: 705 QGGEK--------------GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
            GG                GT   L+SPWDV +    ++V IAMAG HQI+    +    
Sbjct: 305 DGGPADFAADAIDVGALGLGTEVSLSSPWDVVWSEKLQRVVIAMAGTHQIFAFDPLANEV 364

Query: 751 RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
              +G G E  L+G +     FAQ SG+++  +   I+VADSE+SS+R L +   G  + 
Sbjct: 365 SILAGSGLEGLLDGKAE-EAWFAQSSGLAIDGED-NIWVADSETSSLRRLVISDSGVSV- 421

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
              +      LF FG RDG  SE  LQHPLGV    +  + +AD+YN  +++ DPA+  V
Sbjct: 422 ---ETAIGKGLFDFGFRDGEASEARLQHPLGVTVLPDNSVAIADTYNGAVRRYDPATKSV 478

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGI----IEAQNGNLFIADTNNNIIRYLDLNKEEPE 926
           ST              LA  L+EP+ +    +E  +  L + ++N + +  + + KE  +
Sbjct: 479 ST--------------LARGLAEPSDVVVVQVEGSDPLLIVVESNKHQLVLVPIPKEAQQ 524

Query: 927 LQTLELKGVQPPTPKSRSPKRLRRR-SSPDAQTI 959
           +     +  +P +P +     L  R  +P  Q +
Sbjct: 525 VDEGAAQTHRPKSPVTPGTLELAVRFKAPTGQKL 558


>gi|433458786|ref|ZP_20416675.1| NHL repeat containing protein [Arthrobacter crystallopoietes
           BAB-32]
 gi|432192788|gb|ELK49609.1| NHL repeat containing protein [Arthrobacter crystallopoietes
           BAB-32]
          Length = 680

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 195/578 (33%), Positives = 283/578 (48%), Gaps = 73/578 (12%)

Query: 438 DWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT   Q    DL+GK+V+LDFWT+CCINC+HVL +L  LE+KYKD+  TV GVHS K
Sbjct: 24  NWLNTGGKQLGLEDLRGKIVLLDFWTFCCINCLHVLDELRPLEEKYKDVLVTV-GVHSPK 82

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F++E D  A+  AV RY I HPV++D +++ W+     +WPT  VV P G ++A L+GEG
Sbjct: 83  FEHEADPVALAAAVERYEIHHPVLDDPELDTWQAYTARAWPTLVVVDPEGYIVAHLSGEG 142

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKL-----AIDIL 611
           H   ++ LVE  +  +  K  L     P    +          L+FPGK+      +   
Sbjct: 143 HAGGIESLVEELIAEHEAKGTLHRGDGPYVPAEST-----AGDLRFPGKVLPLPEGLGSE 197

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY-----NA 666
                +SD+ H+RIV    D + ++    SG +G +DG  + A FN PQGLA       A
Sbjct: 198 GETFLVSDTGHHRIVELAADLSTVLNTYGSGSKGWQDGDAEAAQFNEPQGLALLPEDVRA 257

Query: 667 KKNL-LYVADTENHALREIDFVNDTVRTLAGNGTK------------------------- 700
           K    + +AD+ NH LR +      V T+AGNG +                         
Sbjct: 258 KAGYDVVIADSVNHRLRGLTLATGAVVTIAGNGVQRLLDAENQRAAAATAEAGPGSVADE 317

Query: 701 -GSDYQGGEKGTSQL---------------LNSPWDVCYKPINEKVYIAMAGQHQIWEHS 744
            GS    GE+    L               L+SPWDV +     KV +AMAG HQI+   
Sbjct: 318 AGSGEDLGEELAEALATASNHLGNEPLNVSLSSPWDVLWSSALGKVVVAMAGVHQIFSFD 377

Query: 745 TVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK- 803
            + G     +G G E   +G ++    FAQ SG++   +   I++ADSE+S++R L    
Sbjct: 378 PLTGELAVLAGTGLEGLQDGEAN-AAWFAQSSGLAQDAN-GSIWIADSETSALRVLTFSD 435

Query: 804 -TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
             G  R+           LF FG RDG  +E  LQHPLGV    +G + VAD+YN  +++
Sbjct: 436 VNGSERVQV--QTAIGTGLFDFGFRDGGAAEARLQHPLGVTVLPDGSVAVADTYNGAVRR 493

Query: 863 LDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
            DPA+  VSTLA     GF + + +    +  AG  E     L + + N + +  + + K
Sbjct: 494 YDPATKTVSTLA----RGFAEPSDVLVDTTAVAGGGEPL---LIVVEANKHQLVRIPIPK 546

Query: 923 EEPELQTLELKGVQPPTPKSRSPKRLRRR-SSPDAQTI 959
           E   +     +  +P T  S  P  L  R ++P  Q +
Sbjct: 547 EALTVDEGASQTQRPKTEVSAGPLALTVRFAAPKGQKL 584


>gi|386773539|ref|ZP_10095917.1| NHL repeat protein [Brachybacterium paraconglomeratum LC44]
          Length = 634

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 174/458 (37%), Positives = 250/458 (54%), Gaps = 39/458 (8%)

Query: 439 WLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   +   + L+GK+V+LDFWT+CC+NC+HVL +L  LE+K+ D    V+GVHS KF
Sbjct: 25  WLNTGGAELDLETLRGKIVLLDFWTFCCVNCLHVLDELRPLEEKWADE-LVVIGVHSPKF 83

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           + EKD EA++  + RY +SHPV++D ++  W   G  +WPT  V+  +G++   L+GEGH
Sbjct: 84  EFEKDPEALQANIERYEVSHPVIDDPELETWSAYGARAWPTLMVLDTHGRIAGNLSGEGH 143

Query: 558 RKDLDDLVEAALLFYGKKK-LLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLF 616
             +LD LV A L+  G+    L   P P  L + ++       L+FP KLA+ + + RL 
Sbjct: 144 AANLDRLV-AELVAEGEADGSLRRGPAPTVLAERSE-----QTLRFPSKLAV-LPDGRLV 196

Query: 617 ISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG-------LAYNAKKN 669
           +SD+  +R+VV   DG  +  I  +GE G  DG  D A F  P G       +A+    +
Sbjct: 197 VSDAGQHRLVVFQADGATVDAIIGTGERGHADGDEDTAQFAEPNGVLALPAEVAHEVGYD 256

Query: 670 LLYVADTENHALREIDFVND---------TVRTLAGNG---TKGSDYQGGE-KGTSQLLN 716
           LL VADT  H LR +    D          V TLAG G    +G     GE    +  L+
Sbjct: 257 LL-VADTAGHRLRGVKIGQDRLLRSRTTTEVTTLAGTGEQWMQGEPLPRGEGDARTYSLS 315

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           +PWD+ +     +  IAMAG HQ+W +  V G     +G   E  ++G  ++ + +AQPS
Sbjct: 316 TPWDLTWSHSLNRAVIAMAGIHQLWTYDPVTGALLVLAGTTQEGLVDG-PAVTSWWAQPS 374

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           G+   PD   I +ADSESS++R L+ +T     L G        LF FG  DG      L
Sbjct: 375 GLDEMPDG-RIVIADSESSAVRLLDPQTMQVSTLVG------KGLFDFGHVDGPLDRARL 427

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           QHPLGV    +G+I +AD+YN  I+ LD  +  V T+A
Sbjct: 428 QHPLGVTALPDGRIAIADTYNGAIRLLDEETGEVVTVA 465



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 138/321 (42%), Gaps = 38/321 (11%)

Query: 711  TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
            + Q L  P  +   P + ++ ++ AGQH++           A  G G   + +G      
Sbjct: 177  SEQTLRFPSKLAVLP-DGRLVVSDAGQHRLVVFQADGATVDAIIGTGERGHADGDED-TA 234

Query: 771  SFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
             FA+P+G+   P  +      ++ VAD+    +R   +K G  RLL          L   
Sbjct: 235  QFAEPNGVLALPAEVAHEVGYDLLVADTAGHRLR--GVKIGQDRLLRSRTTTEVTTLAGT 292

Query: 825  GDR----------DGMGSEVLLQHPLGVYCAKN-GQIYVADSYNHKIKKLDPASNRVSTL 873
            G++          +G      L  P  +  + +  +  +A +  H++   DP +  +  L
Sbjct: 293  GEQWMQGEPLPRGEGDARTYSLSTPWDLTWSHSLNRAVIAMAGIHQLWTYDPVTGALLVL 352

Query: 874  AGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELK 933
            AG  + G  DG A+ +  ++P+G+ E  +G + IAD+ ++ +R LD   +  ++ TL  K
Sbjct: 353  AGTTQEGLVDGPAVTSWWAQPSGLDEMPDGRIVIADSESSAVRLLD--PQTMQVSTLVGK 410

Query: 934  G------VQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEA 987
            G      V  P  ++R    L   + PD +  + D   +  G I L   L EE   + E 
Sbjct: 411  GLFDFGHVDGPLDRARLQHPLGVTALPDGRIAIAD---TYNGAIRL---LDEE---TGEV 461

Query: 988  RSKFSVDVEPENAVIIDPLDG 1008
             +  +   EP +A++  P+DG
Sbjct: 462  VTVATDLKEPSDAIVGPPVDG 482


>gi|383775243|ref|YP_005459809.1| hypothetical protein AMIS_730 [Actinoplanes missouriensis 431]
 gi|381368475|dbj|BAL85293.1| hypothetical protein AMIS_730 [Actinoplanes missouriensis 431]
          Length = 601

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/458 (37%), Positives = 249/458 (54%), Gaps = 48/458 (10%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT        DL+GK+++LDFWT+CCINC+HVL +L  LE+KY D    V
Sbjct: 11  PELKGR-GWLNTGGKDLTLADLRGKILILDFWTFCCINCLHVLDELRPLEEKYGDA-IVV 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++E+D  A+  AV RYG+ HPVV+DGDM+LW++    +WPT AVV P G L+
Sbjct: 69  IGVHSPKFEHERDPVALAAAVERYGVHHPVVDDGDMHLWQQYAAKAWPTLAVVDPTGYLV 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP------LKFP 603
           A +AGEGH + L  L++  ++    K   D T     L + + P  F  P      L+FP
Sbjct: 129 ASMAGEGHAEGLSRLIDELIV----KHEADGT-----LHRGDGP--FVPPPVPEGLLRFP 177

Query: 604 GKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
           GK AI++ N  L +SDS  + IV  + DG  +V+           G   +  F+ PQG+ 
Sbjct: 178 GK-AIELANGNLLVSDSARHSIVELERDGETLVRRFG--------GENRNEPFSEPQGMV 228

Query: 664 Y------NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT--KGSDYQGGEKGTSQLL 715
                        + VADT NH LR +      +  +AG+G   + +         +  L
Sbjct: 229 QLPPEISKITNYDVIVADTVNHQLRALRTETGEIHVVAGSGKPWRSTVDDRPHDALAADL 288

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
           +SPWD+ +   ++KV IAMAG HQ+W    +      ++G   E   +G    +   AQP
Sbjct: 289 SSPWDLAW--FDDKVIIAMAGIHQLWWFDPIKRTVGVYAGTTVEALRDGPLP-DVWMAQP 345

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           SG+S+S D   +++ADSE+S++R   ++ G      G        LF FG  DG   E L
Sbjct: 346 SGLSVSRDGKRLWIADSETSALR--YVEDGVLHTAVG------QGLFDFGHVDGKAEEAL 397

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            QHPLGV    +G + VAD+YN  +++ DPA++ VST+
Sbjct: 398 FQHPLGVAALPDGSVLVADTYNGAVRRFDPAADAVSTV 435



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 764 GSSSLNTSFAQPSG-ISLSPDF-----MEIYVADSESSSIRALNLKTGGSRLLAGGDPIF 817
           G  + N  F++P G + L P+       ++ VAD+ +  +RAL  +TG   ++AG    +
Sbjct: 213 GGENRNEPFSEPQGMVQLPPEISKITNYDVIVADTVNHQLRALRTETGEIHVVAGSGKPW 272

Query: 818 PDNLFKFGDR--DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
              +    DR  D + +++     L  +   + ++ +A +  H++   DP    V   AG
Sbjct: 273 RSTV---DDRPHDALAADLSSPWDLAWF---DDKVIIAMAGIHQLWWFDPIKRTVGVYAG 326

Query: 876 IGKAGFKDGAALAAQLSEPAGIIEAQNG-NLFIADTNNNIIRYLD 919
                 +DG      +++P+G+  +++G  L+IAD+  + +RY++
Sbjct: 327 TTVEALRDGPLPDVWMAQPSGLSVSRDGKRLWIADSETSALRYVE 371


>gi|344257216|gb|EGW13320.1| NHL repeat-containing protein 2 [Cricetulus griseus]
          Length = 552

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 190/549 (34%), Positives = 290/549 (52%), Gaps = 54/549 (9%)

Query: 548  LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLA 607
            +L  L GEGH+  L      AL +Y  +  + +  + + L K++ P    SPL FPGK+A
Sbjct: 1    MLFSLIGEGHKDKLFLYTSMALKYYKDRGQIRDGKIGIKLFKESLP---LSPLLFPGKVA 57

Query: 608  IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
            +D    RL ++D+ H+RI+V   +G     IG     G +DG F +++FN PQG+A    
Sbjct: 58   VDHATGRLVVADTGHHRILVIQKNGQIECSIGGP-NPGRKDGMFSESSFNSPQGVAI--V 114

Query: 668  KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
             N++YVADTENH +R+ID   + V T+AG G +G+D +GGE+G  Q ++SPWDV     +
Sbjct: 115  NNVIYVADTENHLIRKIDLEAEKVSTVAGVGVQGTDTEGGERGEKQPISSPWDVVVGTSD 174

Query: 728  EKV------YIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
             +V      +IAMAG HQIW           +     G    F+G G E N N +     
Sbjct: 175  SEVQRNDILWIAMAGTHQIWALLLDSGTLPKKSELKKGTCLRFAGSGNEENRNNAYPHKA 234

Query: 771  SFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGG--DPIFPDNLFKFGD 826
             FAQPSG+SL+ +  +  ++VADSESS++R+++LK G  + L GG  DP+   NLF FGD
Sbjct: 235  GFAQPSGLSLASEDPWSCLFVADSESSTVRSVSLKDGAVKHLVGGERDPM---NLFAFGD 291

Query: 827  RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
             DG+G    LQHPLGV +  K   +YVADSYNHKIK +DP +   +TLAG G A     +
Sbjct: 292  ADGVGIIAKLQHPLGVAWDQKRSLLYVADSYNHKIKVVDPKTKLCTTLAGTGVANDVVCS 351

Query: 886  ALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQPP------ 938
               +  +EP G+    +G  L++ADTNN+ I+ +DL     E +T+ +  +  P      
Sbjct: 352  FAESAFNEPGGLCVGDSGRLLYVADTNNHQIKVMDL-----EARTVSVLPILKPGSVVVD 406

Query: 939  ----TPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVD 994
                T K ++  ++  +S+P+ Q   V         + LK+ LP     ++   S + + 
Sbjct: 407  GPFATEKQKTAPKV-PKSAPNIQLPPVPVCPGQTLQLKLKLDLPPGAKLTEGVASCWFLT 465

Query: 995  VEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-STGRISCKVYYCKED-EVCLYK 1048
             E    ++ + +      N+S + +  L       S+ +   +S  +YYC  D   C+ K
Sbjct: 466  AEGNEWLLQEQIPSGNIENISNQPTISLQIPAECLSLEAVISVSVFLYYCSADSSACMMK 525

Query: 1049 PLLFEVPFQ 1057
             +LF  P  
Sbjct: 526  AILFRQPLH 534


>gi|261855185|ref|YP_003262468.1| redoxin [Halothiobacillus neapolitanus c2]
 gi|261835654|gb|ACX95421.1| Redoxin domain protein [Halothiobacillus neapolitanus c2]
          Length = 498

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 174/491 (35%), Positives = 264/491 (53%), Gaps = 39/491 (7%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P FPA+  W N +       L+G+VV+LDF+T  CINC+H++P  + L++K+ D    VV
Sbjct: 34  PPFPAQTQWFNVSKPLTGAQLQGRVVLLDFFTPGCINCIHMIPIQQQLKQKFGD-DLLVV 92

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GV S KF   +  + +   + RY +  PV  D  M  W+  GV +WPT  ++ P GK++ 
Sbjct: 93  GVTSPKFTASQQADNMTPFLRRYHVDEPVFIDSGMTWWQHYGVFAWPTMLLLNPEGKVIH 152

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS-LEKDNDPRLFTSPLKFPGKLAID 609
              GE    D+  ++++A+        L +  LPL  L  DN        +  P K+A++
Sbjct: 153 SFVGERSYTDMAAVIQSAVESARAANTLTHPKLPLKPLSADN------HFMVLPTKIAVN 206

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
             +NR+ ISD+ H+++ + D +G  +  IG  G+ G  DGSF  A FNRPQG+A+    N
Sbjct: 207 --DNRVAISDTGHDQVRIFDHEGKLLATIG-DGKAGFADGSFATAEFNRPQGIAW--LGN 261

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            LYVADT+N  +R IDF + TV T+ GNG +    +         LNSPW +  + ++  
Sbjct: 262 DLYVADTDNQRIRRIDFASQTVSTVVGNGQRVFLNEVTAAAKDTPLNSPWGL--EAVDGD 319

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           ++IAMAG H +W +         ++G G E  L+    L   FAQ SG++       +YV
Sbjct: 320 LFIAMAGDHAVWRYDPKTRKLDVYAGTGDE-GLHDGERLLAQFAQSSGLAYHDH--NLYV 376

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           AD ESSSIR +N++T  +  L G        LF FGDRDG   + LLQHP G+    NG 
Sbjct: 377 ADPESSSIRQINMQTSLTITLVG------KGLFSFGDRDGAADQALLQHPQGL-AYLNGA 429

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           +Y+AD++N+ I+KL+  + +VST              +A  L++P G+    +  L IAD
Sbjct: 430 LYIADTFNNAIRKLNLDTLQVST--------------VAKNLAQPNGLAVLNDHTLLIAD 475

Query: 910 TNNNIIRYLDL 920
           T  + I  L++
Sbjct: 476 TYRDRIVALNI 486


>gi|359777541|ref|ZP_09280822.1| hypothetical protein ARGLB_073_01730 [Arthrobacter globiformis NBRC
           12137]
 gi|359305319|dbj|GAB14651.1| hypothetical protein ARGLB_073_01730 [Arthrobacter globiformis NBRC
           12137]
          Length = 666

 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 185/571 (32%), Positives = 286/571 (50%), Gaps = 72/571 (12%)

Query: 438 DWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT       + L+GK+V+LDFWT+CCINC+HVL +L  LE+KY D+  TV GVHS K
Sbjct: 20  NWLNTGGKSLDLEALRGKIVLLDFWTFCCINCLHVLDELRPLEEKYSDVLVTV-GVHSPK 78

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F++E D  A+  AV RY I HPV++D ++  W+     +WPT  V+ P G ++A L+GEG
Sbjct: 79  FEHEADPVALAAAVERYEIHHPVLDDPELETWKAYTARAWPTLVVIDPEGYIVAHLSGEG 138

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGK------- 605
           H   L  L+   +  +  +          +L + N P +   P    L+FPGK       
Sbjct: 139 HADGLGVLIPELIAEHEARG---------TLHRGNGPYVAPEPTSGTLRFPGKALYLPSG 189

Query: 606 ---------------LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
                                     ++D+ H+R++    D + ++    SGE+G  DG+
Sbjct: 190 RGSASASSASDAGAAADAGAAAGTWLVTDTGHHRVLELGTDFHTVLSTYGSGEKGHADGA 249

Query: 651 FDDATFNRPQGLAY-----NAKKNL-LYVADTENHALREIDFVNDTVRTLAGNGTK---- 700
              A FN PQGL        AK    + +AD+ NH LR +   + +V TLAG+G +    
Sbjct: 250 AGIARFNEPQGLVLLPEDVAAKTGYDVVIADSVNHRLRGLSLADGSVTTLAGSGVQRLLE 309

Query: 701 ---------GSDYQG--GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749
                     + + G  G+      L+SPWDV +      V IAMAG HQI+ +  + G 
Sbjct: 310 TGPARVDEDAAGFTGRLGDHPLDVALSSPWDVVWSSKLNAVVIAMAGVHQIFSYEPLTGD 369

Query: 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
               +G+G E  L+G +     FAQPSG++   D   I+VADSE+S++R L +   G+  
Sbjct: 370 VSILAGNGLEGLLDGPAH-EAWFAQPSGLAEDADG-NIWVADSETSALRKLVISDDGAVT 427

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR 869
           +   +      LF FG RDG  SE  LQHPLGV    +G + +AD+YN  +++ DPA+  
Sbjct: 428 V---ESAVGKGLFDFGFRDGEASEARLQHPLGVTVLPDGSVAIADTYNGAVRRYDPAAGT 484

Query: 870 VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQT 929
           VSTLA     G  + + +    ++ AG        L + + N + + Y+ + KE  ++  
Sbjct: 485 VSTLA----RGLAEPSDVIVDHTQVAG----SEPLLVVVEANKHQLVYVPIPKEAQQVDE 536

Query: 930 LELKGVQPPTPKSRSPKRLRRR-SSPDAQTI 959
             ++  +P +P +     L  R ++P  Q +
Sbjct: 537 GAVQTHRPKSPVAPGLMELTVRFTAPTGQKL 567


>gi|373253064|ref|ZP_09541182.1| thiol-disulfide isomerase-like thioredoxin [Nesterenkonia sp. F]
          Length = 659

 Score =  276 bits (705), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 206/589 (34%), Positives = 299/589 (50%), Gaps = 76/589 (12%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   +    DL+GK+V+LDFWT+CCINC+HVL ++  LE+++ D+  TV GVHS KF
Sbjct: 21  WLNTGGEEVTLADLRGKIVILDFWTFCCINCLHVLDEMRPLEERFSDVLVTV-GVHSPKF 79

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           D+E D +A+  AV RY I+ PV++D ++  W+     +WPT  V+ P G + A LAGEGH
Sbjct: 80  DHEADPDALAAAVERYEIARPVLDDPNLTTWQAYSARAWPTLVVIDPEGYIAAHLAGEGH 139

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILN----- 612
              LD LVE  +  +  K  L     P        P   +  L+FPG  A+ +       
Sbjct: 140 VAGLDSLVEELVAEHEAKGTLHRGDGPYV-----PPEPVSRTLRFPGT-AVPVTRPLGAD 193

Query: 613 ------NRLFISDSNHNRIVVTDLDGNFIVQ----IGSSGEEGLRDGSFDDATFNRPQGL 662
                  R  ++D+ H+RIV  D D   +V+        GE+G RDG+  +A F  PQG+
Sbjct: 194 DDAAAAGRFLVADTGHHRIVELDADLETVVRSWGGGPEGGEKGHRDGTAAEALFTEPQGV 253

Query: 663 AYNAKKNL------LYVADTENHALREIDFVNDTVRTLAGNGTK---GSDYQGGEK---- 709
           A    +        L VADT NH LR ID   D V T+AGNG +    SD    E+    
Sbjct: 254 AILPAEVAAQVGYDLVVADTVNHRLRGIDVSGDRVLTVAGNGVQRLIDSDRVAQEQAAGV 313

Query: 710 ---GTSQL---LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN 763
              GT  L   L+SPWDV +      + +AMAG HQI+E     G  R  +G G E   +
Sbjct: 314 GSLGTEPLEVSLSSPWDVLWSEAAGTLIVAMAGTHQIFEFVPTTGELRVLAGTGLEGLTD 373

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
           GS+     FAQ SG++ +    ++++ADSE+SS+R   L+T         + I  + +F 
Sbjct: 374 GSAD-EAWFAQTSGLA-ADAAGDVWIADSETSSLRV--LRTAEDPKAPRVETIVGEGMFD 429

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
           FG RDG  ++  LQHPLGV    +G + VAD+YN  I++      R   LA  G     +
Sbjct: 430 FGFRDGDPAQARLQHPLGVAALPDGSVLVADTYNGAIRRY-----RGEHLAADGTTVPAE 484

Query: 884 GAALAAQLSEPAGI-IEAQNGNLFIADTN-NNIIRYLD----LNKEEPELQT-------- 929
            + +A  L EP+ + ++A    L + +TN + ++R       L  +E  +Q+        
Sbjct: 485 VSTVARGLKEPSDVLLDADGSTLLVVETNAHELVRVAIPEEFLTVDEGAMQSHRPSTDVA 544

Query: 930 ---LELK-GVQPPTPKSR-----SPKRLRRRSSPDAQTIVVDGGLSNEG 969
              L L  G   PT +        P +L+  SSPD   ++V G  S+EG
Sbjct: 545 PGELTLTVGFSAPTGQKLDDRFGDPTQLKISSSPD--ELIVSGAGSSEG 591


>gi|336322170|ref|YP_004602138.1| alkyl hydroperoxide reductase [[Cellvibrio] gilvus ATCC 13127]
 gi|336105751|gb|AEI13570.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [[Cellvibrio] gilvus ATCC 13127]
          Length = 638

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 179/495 (36%), Positives = 259/495 (52%), Gaps = 66/495 (13%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT        DL+GKVVVLDFWT+CCINC+HVL ++  LE ++ D+   VVGVHS KF
Sbjct: 18  WLNTGGRDVSLADLRGKVVVLDFWTFCCINCLHVLDEMRELEAEFSDV-LVVVGVHSPKF 76

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D  A+ +AV RY + HPV++D D+  WR     +WPT  V+ P G ++AQ+AGEGH
Sbjct: 77  VHEADPVALASAVERYEVHHPVLDDPDLVTWRAYTARAWPTLVVIDPEGYVVAQMAGEGH 136

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
           R +L+ LV   +  +  K          +L +   P +  +P    L+FP K A+ + + 
Sbjct: 137 RHNLEVLVRELVAEHDPKG---------TLHRGGGPYVPPAPTPGTLRFPAK-AVALPDG 186

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLY- 672
            L ++D+ H+ +     DG  +V+   SGE GL DG  DDA F+ P GL     +   + 
Sbjct: 187 NLLVADAGHHSLAELAPDGQTLVRRIGSGERGLVDGGPDDARFSEPNGLCLVPDELRPWV 246

Query: 673 -----VADTENHALREIDFVNDTVRTLAGNGTK--------------GSDYQGGEKGTSQ 713
                VADT NHALR +   +  V T+AG G +              G D  G     + 
Sbjct: 247 GYDVLVADTVNHALRGVRLADGHVSTVAGTGEQFMVGAADNVLPGWGGDDRSGRAYAGAP 306

Query: 714 L---LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
           L   L+SPWDV +        +AMAG H +W     +   R  +G   E  L+G  + + 
Sbjct: 307 LAVRLSSPWDVTWSAAWGAFVVAMAGNHTLWAFDPKEPSLRHVAGTMNEGLLDGPLA-DA 365

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRAL-----NLKTGGSRLLAGGDPIFPDNLFKFG 825
            FAQPSG+++  D   I++ADSE+S++R +     +   G  R + G        LF+FG
Sbjct: 366 WFAQPSGLAVD-DEGGIWLADSETSALRVVEPVHGSAGDGSVRTVVGA------GLFEFG 418

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            RDG   E  LQHPLGV    +G + VAD+YN  +++          +AG   AG   GA
Sbjct: 419 HRDGAADEARLQHPLGVAVLPDGSVAVADTYNGAVRRF---------VAGTDGAG---GA 466

Query: 886 --ALAAQLSEPAGII 898
              +A  L+EP+G++
Sbjct: 467 VTTIATGLAEPSGLV 481



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM---- 785
           + +A AG H + E +  DG T        ER L      +  F++P+G+ L PD +    
Sbjct: 188 LLVADAGHHSLAELAP-DGQTLVRRIGSGERGLVDGGPDDARFSEPNGLCLVPDELRPWV 246

Query: 786 --EIYVADSESSSIRALNLKTGGSRLLAGGDPIF----PDNLFKFGDRDGMGSEVLLQHP 839
             ++ VAD+ + ++R + L  G    +AG    F     DN+      D          P
Sbjct: 247 GYDVLVADTVNHALRGVRLADGHVSTVAGTGEQFMVGAADNVLPGWGGDDRSGRAYAGAP 306

Query: 840 LGV---------YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
           L V         + A  G   VA + NH +   DP    +  +AG    G  DG    A 
Sbjct: 307 LAVRLSSPWDVTWSAAWGAFVVAMAGNHTLWAFDPKEPSLRHVAGTMNEGLLDGPLADAW 366

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            ++P+G+     G +++AD+  + +R ++
Sbjct: 367 FAQPSGLAVDDEGGIWLADSETSALRVVE 395


>gi|386845144|ref|YP_006263157.1| NHL repeat-containing protein 2 [Actinoplanes sp. SE50/110]
 gi|359832648|gb|AEV81089.1| NHL repeat-containing protein 2 [Actinoplanes sp. SE50/110]
          Length = 600

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/503 (34%), Positives = 262/503 (52%), Gaps = 67/503 (13%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT        DL+GK+++LDFWT+CCINC+HVL +L  LE+KY D    V
Sbjct: 8   PELKGR-GWLNTGGKALTLADLRGKILILDFWTFCCINCLHVLDELRPLEEKYGDA-LVV 65

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++E+D  A+  AV RYG+ HPVV+DGDM+LW++    +WPT AVV P G L+
Sbjct: 66  IGVHSPKFEHERDPRALAAAVERYGVHHPVVDDGDMHLWQQYAAKAWPTLAVVDPTGYLV 125

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP------LKFP 603
           A +AGEGH + L  L++  +  +G            +L + + P  F  P      L FP
Sbjct: 126 ASMAGEGHAEGLSRLIDELVAKHGADG---------TLHRGDGP--FVPPPAPAGLLHFP 174

Query: 604 GKLAIDILNNRLFISDSNHNRIVVTDLDGNFIV-QIGSSGEEGLRDGSFDDATFNRPQGL 662
           GK AI++    L +SDS  + +V    DG  +V + G  G             F+ PQGL
Sbjct: 175 GK-AIELPGGNLLVSDSARHSVVELTPDGATLVRRFGGPGR---------GEPFSEPQGL 224

Query: 663 AYNAKKNL------LYVADTENHALREIDFVNDTVRTLAGNGT--KGSDYQGGEKGTSQL 714
                +        + VADT NH LR ++     V  +AG+G   + +         +  
Sbjct: 225 VLLPAEVRELAGYDVVVADTVNHQLRALNLSTGEVTLVAGSGRPWRSAVDDHAHDALATD 284

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
           L+SPWD+ +   ++KV IAMAG HQ+W    +      ++G   E   +G    +   AQ
Sbjct: 285 LSSPWDLAW--FDDKVIIAMAGIHQLWWFDPIKRTVGVYAGTTVEALRDGPLP-DVWMAQ 341

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           PSG+S+  D   +++ADSE+S++R   ++ G      G        LF FG  DG     
Sbjct: 342 PSGLSVHGD--RLWIADSETSALR--FVEDGVLHTAVG------QGLFDFGHVDGPAGAA 391

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           L QHPLGV    +G + VAD+YN  +++ DPASN VST              + A L+EP
Sbjct: 392 LFQHPLGVAALADGSVLVADTYNGAVRRFDPASNEVST--------------VDAGLAEP 437

Query: 895 AGIIEAQNGNLFIADT-NNNIIR 916
           + ++    G + + ++  + ++R
Sbjct: 438 SDVLVTAAGEVLVVESAAHRLVR 460



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 128/353 (36%), Gaps = 89/353 (25%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADT---------ENHALREIDFVNDTVRTLA 695
           G+     DD   +  Q  A  A   L  V  T         E HA      +++ V   A
Sbjct: 90  GVHHPVVDDGDMHLWQQYAAKAWPTLAVVDPTGYLVASMAGEGHAEGLSRLIDELV---A 146

Query: 696 GNGTKGSDYQGG-----EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
            +G  G+ ++G          + LL+ P      P    + ++ + +H + E  T DG T
Sbjct: 147 KHGADGTLHRGDGPFVPPPAPAGLLHFPGKAIELP-GGNLLVSDSARHSVVE-LTPDGAT 204

Query: 751 --RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM------EIYVADSESSSIRALNL 802
             R F G G              F++P G+ L P  +      ++ VAD+ +  +RALNL
Sbjct: 205 LVRRFGGPGR----------GEPFSEPQGLVLLPAEVRELAGYDVVVADTVNHQLRALNL 254

Query: 803 KTGGSRLLAGG------------------DPIFPDNLFKFGD------------------ 826
            TG   L+AG                   D   P +L  F D                  
Sbjct: 255 STGEVTLVAGSGRPWRSAVDDHAHDALATDLSSPWDLAWFDDKVIIAMAGIHQLWWFDPI 314

Query: 827 ---------------RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS 871
                          RDG   +V +  P G+    + ++++ADS    ++ ++      +
Sbjct: 315 KRTVGVYAGTTVEALRDGPLPDVWMAQPSGLSVHGD-RLWIADSETSALRFVEDGVLHTA 373

Query: 872 TLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
              G+   G  DG A AA    P G+    +G++ +ADT N  +R  D    E
Sbjct: 374 VGQGLFDFGHVDGPAGAALFQHPLGVAALADGSVLVADTYNGAVRRFDPASNE 426


>gi|449532695|ref|XP_004173316.1| PREDICTED: NHL repeat-containing protein 2-like, partial [Cucumis
            sativus]
          Length = 194

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/196 (70%), Positives = 161/196 (82%), Gaps = 3/196 (1%)

Query: 891  LSEPAGIIEAQNGNLFIADTNNNIIRYLDLN-KEEPELQTLELKGVQPPTPKSRSPKRLR 949
            LSEP+GI EA  G LFIADTNNN+IRYL LN +E+ +L TLELKGVQPP PK++S KRLR
Sbjct: 1    LSEPSGITEA-GGRLFIADTNNNVIRYLYLNNREQSQLLTLELKGVQPPNPKTKSLKRLR 59

Query: 950  RRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGN 1009
            RRS PD QTI+VDGG  +EGN+ LKISLP+EYHFSKEARSKF+V+ EPE  + IDP DG 
Sbjct: 60   RRS-PDTQTIIVDGGAFSEGNLSLKISLPKEYHFSKEARSKFNVETEPETVLSIDPSDGY 118

Query: 1010 LSPEGSAVLHFRRMSPSVSTGRISCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEIT 1069
            LSPEG A LHF+R SP+ S GRISCKVYYCKEDEVCLYK LLFEVPF+EEV  +  AEIT
Sbjct: 119  LSPEGFASLHFKRSSPAASLGRISCKVYYCKEDEVCLYKSLLFEVPFREEVSETSKAEIT 178

Query: 1070 LPYDLKPKILTNSLQL 1085
            L +++KPK  T+SL L
Sbjct: 179  LAFEVKPKTSTSSLPL 194


>gi|365861024|ref|ZP_09400809.1| alkyl hydroperoxide reductase [Streptomyces sp. W007]
 gi|364009547|gb|EHM30502.1| alkyl hydroperoxide reductase [Streptomyces sp. W007]
          Length = 560

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 154/412 (37%), Positives = 234/412 (56%), Gaps = 23/412 (5%)

Query: 466 INCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDM 525
           +NC+HVL +L  LE+K++D    ++GVHS KF +E + +A+ +AV RY + HPV++D ++
Sbjct: 1   MNCLHVLDELRELEEKHRDT-VVIIGVHSPKFVHEAEHQAVVDAVERYEVHHPVLDDPEL 59

Query: 526 NLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
             W++  V +WPT  V+ P G ++AQ AGEGH   ++ LV+     +  K  L     P 
Sbjct: 60  ATWKQYAVRAWPTLVVIDPEGYVVAQHAGEGHAHAIEKLVDELESEHAAKGTLRRGDGPY 119

Query: 586 SLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEG 645
                  P    + L+FPGK A+ + +    +SD+  +R+V  D DG  + +   +GE G
Sbjct: 120 VA-----PEPVATHLRFPGK-ALLLPDGGFLVSDTTRHRLVELDADGETVRRHFGTGERG 173

Query: 646 LRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGS 702
           L DG  D+A F+ PQGLA       + VADT NHALR +D       TLAG G    +G+
Sbjct: 174 LSDGGPDEARFSEPQGLAV-LPDGRVAVADTVNHALRALDLTTGVTSTLAGTGRQWWQGT 232

Query: 703 DYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL 762
              G  +     L+SPWDV +    ++++IAMAG HQ+W +       R  +G   E  +
Sbjct: 233 PTSGPAREVD--LSSPWDVAW--FGDRLWIAMAGVHQLWTYDPESATVRVAAGTTNEGLV 288

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
           +G ++    FAQPSG+++S D   ++VADSE+SS+R ++        +  G       LF
Sbjct: 289 DGPAA-EAWFAQPSGLAVSADGERLWVADSETSSLRWVDRDEHVRTAVGTG-------LF 340

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
            FG RDG   + LLQHPLGV    +G + ++D+YNH +++ DPAS  V+TLA
Sbjct: 341 DFGHRDGAADQALLQHPLGVTALPDGSVAISDTYNHALRRYDPASGEVTTLA 392



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 55/226 (24%)

Query: 747 DGVT-RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           DG T R   G G ER L+        F++P G+++ PD   + VAD+ + ++RAL+L TG
Sbjct: 159 DGETVRRHFGTG-ERGLSDGGPDEARFSEPQGLAVLPDG-RVAVADTVNHALRALDLTTG 216

Query: 806 GSRLLAG-------GDPIF----------PDNLFKFGDR--------------------- 827
            +  LAG       G P            P ++  FGDR                     
Sbjct: 217 VTSTLAGTGRQWWQGTPTSGPAREVDLSSPWDVAWFGDRLWIAMAGVHQLWTYDPESATV 276

Query: 828 ------------DGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASN-RVSTL 873
                       DG  +E     P G+  + +G+ ++VADS    ++ +D   + R +  
Sbjct: 277 RVAAGTTNEGLVDGPAAEAWFAQPSGLAVSADGERLWVADSETSSLRWVDRDEHVRTAVG 336

Query: 874 AGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            G+   G +DGAA  A L  P G+    +G++ I+DT N+ +R  D
Sbjct: 337 TGLFDFGHRDGAADQALLQHPLGVTALPDGSVAISDTYNHALRRYD 382



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G   V+D+  H++ +LD     V    G G+ G  DG    A+ SEP 
Sbjct: 129 LRFPGKALLLPDGGFLVSDTTRHRLVELDADGETVRRHFGTGERGLSDGGPDEARFSEPQ 188

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLN 921
           G+    +G + +ADT N+ +R LDL 
Sbjct: 189 GLAVLPDGRVAVADTVNHALRALDLT 214



 Score = 46.2 bits (108), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQG 661
           P  LA+     RL+++DS  + +   D D +    +G+   + G RDG+ D A    P G
Sbjct: 300 PSGLAVSADGERLWVADSETSSLRWVDRDEHVRTAVGTGLFDFGHRDGAADQALLQHPLG 359

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           +      ++  ++DT NHALR  D  +  V TLA +  + SD
Sbjct: 360 VTALPDGSVA-ISDTYNHALRRYDPASGEVTTLATDVREPSD 400


>gi|256833654|ref|YP_003162381.1| alkyl hydroperoxide reductase [Jonesia denitrificans DSM 20603]
 gi|256687185|gb|ACV10078.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Jonesia denitrificans DSM 20603]
          Length = 628

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/476 (35%), Positives = 248/476 (52%), Gaps = 41/476 (8%)

Query: 438 DWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT       D L+GK+V+LDFWT+CCINC+HVL +L  LE++++D    ++GVHS K
Sbjct: 32  NWLNTGGRTLTLDELRGKIVILDFWTFCCINCLHVLDELRELEEQHRDE-LVIIGVHSPK 90

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F +E D +A+  AV RYG++HPV++D  ++ W+     +WPT  V+ P G ++A +AGEG
Sbjct: 91  FVHEADPDALAAAVERYGVAHPVLDDPTLSTWQAYTARAWPTLVVIDPEGYIVAHMAGEG 150

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLF 616
           H   L  +V   +  +  +  L     P        P      L FP K A+ +      
Sbjct: 151 HAPALARIVTQLIEDHDARGTLHRGSGPYV-----PPPTTAGMLSFPAK-AVPLPAGGYL 204

Query: 617 ISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNLLY- 672
           ++D+ H++IV    DG        +GE GL DG    A FN P GL     +    + Y 
Sbjct: 205 VADAGHHQIVHVAADGVTEQARYGAGERGLVDGPAHTAQFNEPNGLLVLPPDVAAEVGYD 264

Query: 673 --VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
             VADT NH +R +      V TLAGNG +   Y  G       L SPWDV +    ++V
Sbjct: 265 VVVADTVNHCVRSLSLSTGAVGTLAGNGRQ---YMVGGPDNEGRLTSPWDVVWSAHRKQV 321

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP-DFME-IY 788
            IAMAG H +W      G  + F+G   E  ++G  +  + FAQPSG++++  D  E ++
Sbjct: 322 IIAMAGNHTLWTLDPRTGQCQWFAGTMNEGLVDGPVA-QSWFAQPSGLAVTGVDADERVW 380

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           VADSE+S++R ++        +  G       LF FG RDG   + L QHPL V    + 
Sbjct: 381 VADSETSALRWIDTSDTVHTAVGAG-------LFDFGHRDGDADQALFQHPLAVAALPDN 433

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN 904
            + VAD+YN  +++ DPA+  VST              LA+ L+EP+G++    G 
Sbjct: 434 SLVVADTYNGALRRYDPATRTVST--------------LASGLAEPSGMVVHHEGG 475



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 94/247 (38%), Gaps = 61/247 (24%)

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI-SLSPDF-----M 785
           +A AG HQI  H   DGVT        ER L    +    F +P+G+  L PD       
Sbjct: 205 VADAGHHQI-VHVAADGVTEQARYGAGERGLVDGPAHTAQFNEPNGLLVLPPDVAAEVGY 263

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIF----PDN--------------------- 820
           ++ VAD+ +  +R+L+L TG    LAG    +    PDN                     
Sbjct: 264 DVVVADTVNHCVRSLSLSTGAVGTLAGNGRQYMVGGPDNEGRLTSPWDVVWSAHRKQVII 323

Query: 821 -------LFKFGDR----------------DGMGSEVLLQHPLGVYCA---KNGQIYVAD 854
                  L+    R                DG  ++     P G+       + +++VAD
Sbjct: 324 AMAGNHTLWTLDPRTGQCQWFAGTMNEGLVDGPVAQSWFAQPSGLAVTGVDADERVWVAD 383

Query: 855 SYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           S    ++ +D  S+ V T  G G    G +DG A  A    P  +    + +L +ADT N
Sbjct: 384 SETSALRWID-TSDTVHTAVGAGLFDFGHRDGDADQALFQHPLAVAALPDNSLVVADTYN 442

Query: 913 NIIRYLD 919
             +R  D
Sbjct: 443 GALRRYD 449


>gi|220914451|ref|YP_002489760.1| NHL repeat containing protein [Arthrobacter chlorophenolicus A6]
 gi|219861329|gb|ACL41671.1| NHL repeat containing protein [Arthrobacter chlorophenolicus A6]
          Length = 674

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 282/581 (48%), Gaps = 84/581 (14%)

Query: 438 DWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT       + L+GK+V+LDFWT+CCINC+HVL +L  LE++Y D+  TV GVHS K
Sbjct: 20  NWLNTGGKTLDLEALRGKIVLLDFWTFCCINCLHVLDELRPLEEQYSDVLVTV-GVHSPK 78

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F++E D  A+  AV RY I HPV++D +++ W+     +WPT  V+ P G ++A L+GEG
Sbjct: 79  FEHEADPVALAAAVERYEIHHPVLDDPELDTWKAYTARAWPTLVVIDPEGYIVAHLSGEG 138

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGK----------- 605
           H   L  L+   +  +  K  L     P        P   +  L+FPGK           
Sbjct: 139 HADGLAVLIPELIAEHEAKGTLHRGSGPYVA-----PEATSGTLRFPGKALFLPAGRGST 193

Query: 606 ---------------LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
                           +         ++D+ H+R+V    D   ++    SG +G  DG+
Sbjct: 194 AAEEASDGGAAAGAAASGSDGKGSWLVTDTGHHRLVELGTDFETVLATYGSGTKGYADGT 253

Query: 651 F--DDAT--FNRPQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTK 700
              +DAT  FN PQGL     +    + Y   +AD+ NH LR +   +    TLAGNG +
Sbjct: 254 AAGEDATAQFNEPQGLVLLPEDVAAKVGYDVVIADSVNHRLRGLSLTDGKALTLAGNGVQ 313

Query: 701 -------------GSDYQG--GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
                        G+ + G  G       L+SPWDV +      V +AMAG HQI+    
Sbjct: 314 RLLETGPARVDEDGAGFSGSLGNDPLDVSLSSPWDVVWSRKLNAVVVAMAGTHQIFSFDP 373

Query: 746 VDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           + G     +G+G E  L+G +   + FAQ SG++   D   I+VADSE+S++R L +   
Sbjct: 374 LTGAVAIVAGNGLEGLLDGPAH-ESWFAQSSGLAEDAD-GNIWVADSETSALRTLVIDDT 431

Query: 806 GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
           GS  +          LF FG RDG  +E  LQHPLGV    +G + +AD+YN  +++ DP
Sbjct: 432 GSLTV---KTAVGKGLFDFGFRDGTAAEARLQHPLGVTVLPDGSVAIADTYNGAVRRFDP 488

Query: 866 ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN------LFIADTNNNIIRYLD 919
           A+  VST              LA  L+EP+ +I    G       L + + N + + Y+ 
Sbjct: 489 ATGTVST--------------LARGLAEPSDVIVDATGAAGSEPLLVVVEANKHQLVYVP 534

Query: 920 LNKEEPELQTLELKGVQPPTPKSRSPKRLRRR-SSPDAQTI 959
           + KE  ++     +  +P +P +  P  L  R ++P  Q +
Sbjct: 535 IPKEAQQVDEGASQTQRPKSPVAPGPLELAVRFTAPTGQKL 575


>gi|309813024|ref|ZP_07706752.1| putative septum site-determining protein MinC [Dermacoccus sp.
           Ellin185]
 gi|308433096|gb|EFP57000.1| putative septum site-determining protein MinC [Dermacoccus sp.
           Ellin185]
          Length = 651

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 176/553 (31%), Positives = 274/553 (49%), Gaps = 84/553 (15%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT         L+GKVVVLDFWT+CCINC+HVL +L  LE+KY D    +
Sbjct: 21  PELTGR-GWLNTGGADITLTSLRGKVVVLDFWTFCCINCLHVLDELRPLEEKYGDQ-LVL 78

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS KF++E D +A+  AV RY + HPV++D D+  W+     +WPT  V+ P G ++
Sbjct: 79  IGVHSPKFEHEADRDALEAAVERYAVHHPVLDDPDLTTWQAYAARAWPTLVVLDPEGYIV 138

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI- 608
           A ++GEGH   L  L++  +  +  K  L     P        P    + L+FPGK+   
Sbjct: 139 ASMSGEGHAHGLSVLIDDLIAEHTTKGTLRRGDGPYVA-----PPAPETLLRFPGKVITA 193

Query: 609 --------------------------DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG 642
                                      + +   F+SD+ H+++V    DG    ++   G
Sbjct: 194 PARPVQAQPTGRQSADDAASSAGAGEHLTSGGFFVSDTAHHQVVHLAEDGE--TELARYG 251

Query: 643 EEGLRDGSFDDATFNRPQGL------AYNAKKNLLYVADTENHALREIDFVNDTVRTLAG 696
             G+         FN PQGL      A     + L VAD+ NH ++ I   +  +RT+AG
Sbjct: 252 GPGV---------FNEPQGLLLLPEEARARTGDDLLVADSVNHEIKAIRLSDGRIRTVAG 302

Query: 697 NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW-----EHSTVDGVTR 751
            G +  +  GG     Q L++PWD+ +   +++V IAMAG HQ+W     E   ++ V  
Sbjct: 303 TGEQLRERDGGGPALRQALSTPWDLAW--WHDRVIIAMAGTHQLWALHLGESPELNTVA- 359

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLA 811
             +G   E   +G++  +  FAQPSG++ S D   ++VADSE+S++R+L++   G  +  
Sbjct: 360 VLAGTSNEGIRDGAAH-DAWFAQPSGLATSADGSHVWVADSETSALRSLSVSDEGFEVTT 418

Query: 812 GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS 871
                    LF FG  DG     LLQHPLGV    +G + VAD+YN  I++ DP+S  V+
Sbjct: 419 H----VGQGLFDFGHVDGAADAALLQHPLGVTELPDGSVAVADTYNGAIRRFDPSSGEVT 474

Query: 872 TLAGIGKAGFKDGAALAAQLSEPAGIIEA-----QNGNLFIADTNNNIIRYLDLNKEEPE 926
           T              LA  L+EP+ +I        + +L + ++N + +  + L  E   
Sbjct: 475 T--------------LATGLAEPSDVIVVPGEVDADAHLLVVESNAHRLTPVALTAEAQR 520

Query: 927 LQTLELKGVQPPT 939
           ++    +  +PP+
Sbjct: 521 IEGDAQQTQRPPS 533


>gi|296128041|ref|YP_003635291.1| alkyl hydroperoxide reductase [Cellulomonas flavigena DSM 20109]
 gi|296019856|gb|ADG73092.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Cellulomonas flavigena DSM 20109]
          Length = 639

 Score =  269 bits (688), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 168/495 (33%), Positives = 249/495 (50%), Gaps = 68/495 (13%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT        DL+GKVVVLDFWT+CCINC+HVL +L  +E++++D+   +VGVHS KF
Sbjct: 22  WLNTGGKDVTLADLRGKVVVLDFWTFCCINCLHVLDELREIEERHRDV-LVIVGVHSPKF 80

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D  A+  AV RY + HPV++D D+  W+     +WPT  V+ P G ++AQ+AGEGH
Sbjct: 81  VHEADPVALAAAVERYEVHHPVLDDPDLVTWQAFTARAWPTLVVIDPEGYVVAQMAGEGH 140

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
              ++ LV   +  +  K          +L + + P +  +P    L+FP K A+++   
Sbjct: 141 AHAVETLVRDLVAEHEAKG---------TLHRGDGPYVAPTPQPTTLRFPAK-AVELPGG 190

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNL 670
              ++D+ H+ +     DG  +V+   SGE GL DG  DDA F+ P GL       +  +
Sbjct: 191 TFLVADAGHHTLTEVAADGETLVRRIGSGERGLVDGGPDDARFSEPNGLGLVPDELRGRV 250

Query: 671 LY---VADTENHALREIDFVNDTVRTLAGNGTK--------------------GSDYQGG 707
            Y   VADT NHALR +   +  V TLAG G +                    GS     
Sbjct: 251 GYDVLVADTVNHALRGVRLSDGHVTTLAGTGEQYMVGAVDNVRPADGDTANPAGSGVGDR 310

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767
                  L+SPWDV +        +AMAG H +W    V G     +G   E  ++G+  
Sbjct: 311 WAARQVKLSSPWDVAWSTELAAFVVAMAGNHTLWAFDPVGGTVTHLAGTMNEGLVDGTPQ 370

Query: 768 LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
               FAQPSG+S+      +++AD+E+S++R ++        + G        LF FG R
Sbjct: 371 -EAWFAQPSGLSVDA-AGRLWLADAETSALRWVDPADASVHSVVG------TGLFDFGHR 422

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP----ASNRVSTLAGIGKAGFKD 883
           DG   + L QHPLGV    +G + VAD+YN  +++  P    A   V+T           
Sbjct: 423 DGAADQALFQHPLGVAALPDGSVLVADTYNGALRRWQPGEGDAPGTVTT----------- 471

Query: 884 GAALAAQLSEPAGII 898
              LA  L+EP+G++
Sbjct: 472 ---LATDLAEPSGLV 483



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 27/212 (12%)

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM------ 785
           +A AG H + E    DG T        ER L      +  F++P+G+ L PD +      
Sbjct: 194 VADAGHHTLTE-VAADGETLVRRIGSGERGLVDGGPDDARFSEPNGLGLVPDELRGRVGY 252

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAG-----------------GDPIFPDNLFKFGDRD 828
           ++ VAD+ + ++R + L  G    LAG                 GD   P      GDR 
Sbjct: 253 DVLVADTVNHALRGVRLSDGHVTTLAGTGEQYMVGAVDNVRPADGDTANPAG-SGVGDR- 310

Query: 829 GMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
               +V L  P  V +  +     VA + NH +   DP    V+ LAG    G  DG   
Sbjct: 311 WAARQVKLSSPWDVAWSTELAAFVVAMAGNHTLWAFDPVGGTVTHLAGTMNEGLVDGTPQ 370

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            A  ++P+G+     G L++AD   + +R++D
Sbjct: 371 EAWFAQPSGLSVDAAGRLWLADAETSALRWVD 402


>gi|452910311|ref|ZP_21958992.1| hypothetical protein C884_01866 [Kocuria palustris PEL]
 gi|452834558|gb|EME37358.1| hypothetical protein C884_01866 [Kocuria palustris PEL]
          Length = 632

 Score =  269 bits (688), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 181/529 (34%), Positives = 275/529 (51%), Gaps = 53/529 (10%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   Q   + L+GK+V+LDFW++CCINC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 17  WLNTGGEQLDWQKLRGKIVILDFWSFCCINCLHVLDELRPLEERFSDVLVTV-GVHSPKF 75

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D EA+ +AV RY I HPV++D ++  W      +WPT  VV P G ++A L+GEGH
Sbjct: 76  EHEADPEALASAVDRYEIHHPVLDDPELGTWDAYTARAWPTLVVVDPEGYIVAHLSGEGH 135

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
            + +  LVE  +  +     L     P        P +    L+FP K A+ + +  + +
Sbjct: 136 VQGIVSLVEQLVEQHEAAGTLHRGDGPYV-----PPEITDGDLRFPEK-AVALEDGSVLV 189

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNLLY-- 672
           +D+ H+R+V    D   +  +   G  G  DG  ++A FN P+GLA      ++ + Y  
Sbjct: 190 ADTGHHRLVRMAADLQTVRSVIGDGTRGPADGGPEEAHFNEPRGLALLPQGVREQVGYDV 249

Query: 673 -VADTENHALREIDFVNDTVRTLAGNGTK-----------GSDYQGGEKGTSQL-LNSPW 719
            VADT NH LR +   +  V TLAG+G +            +D+   E     + L+SPW
Sbjct: 250 IVADTVNHRLRGVRLSDGEVTTLAGSGVQRLLDSERAKGVDADHIDPEADPRDVALSSPW 309

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           D  +    + + +AM+G HQI+      G     +G G E  ++G  S  + FAQ SG+ 
Sbjct: 310 DTVWSTAADTLVVAMSGTHQIFTFDPRTGELAVAAGTGDEGLVDGDPS-QSWFAQTSGLV 368

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
            +PD   I+ ADSESS++R++ +  G    L+G        L+ FG RDG  ++  LQHP
Sbjct: 369 EAPDGT-IWAADSESSALRSIAVADGA---LSGVATAAGLGLYDFGFRDGDSTQARLQHP 424

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV    +G I VAD+YN  I++ DP   ++ST              L     EP+ ++ 
Sbjct: 425 LGVAVLPDGSIAVADTYNGAIRRWDPVEGQLST--------------LERDFDEPSDLLV 470

Query: 900 AQNG---NLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
             +G    L + +TN +  R + L   E  LQ  E   V   + +SR+P
Sbjct: 471 DASGETPELIVVETNRH--RLVRLPVPEKLLQVDEGASV---SQRSRTP 514


>gi|381163732|ref|ZP_09872962.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           azurea NA-128]
 gi|379255637|gb|EHY89563.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           azurea NA-128]
          Length = 633

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 183/543 (33%), Positives = 269/543 (49%), Gaps = 39/543 (7%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFL 478
           VE  K+    PE      W NT   PL  R  L+G++V+LDFWT  CINC+HVL +L  L
Sbjct: 9   VEQSKSRVRAPELNGDA-WWNTGGEPLTLR-GLRGRIVLLDFWTSGCINCLHVLDELRPL 66

Query: 479 EKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPT 538
           E+++ D+  T+ GVHS KF +E   +++  AV R G+ HPVV+D DM+LW++  V +WPT
Sbjct: 67  EEEFADVLVTI-GVHSPKFAHEGGRDSVGAAVARLGVEHPVVSDPDMSLWQQYAVKAWPT 125

Query: 539 FAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS----LEKDNDPR 594
             VV P G ++   AGEGH   L  ++   +  + +K  L    L  S      ++ D  
Sbjct: 126 LVVVDPEGYVVHVAAGEGHGDALRRVIGELVEVHERKGTLVRGELDWSEVARARREEDGA 185

Query: 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDA 654
                L+FP K A+     R+ ++D+ ++ I     D   +++    G  G  DG+FD A
Sbjct: 186 ARIDGLRFPSK-AVVTAEGRVLVADTANHSIAEFASDAETLLRRFGDGHRGAVDGAFDVA 244

Query: 655 TFNRPQGLAY------NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
            F  P GL        +     L VADT NH LR +D    +VRT+AG G +  D     
Sbjct: 245 RFAEPSGLTLLPTHVADQVGYHLIVADTANHLLRGVDLRTGSVRTVAGTGAQWRDGDDSG 304

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL 768
             T   L SPWD  +      V +AMAG H +     V G    F+G   E  L    + 
Sbjct: 305 PATEVDLTSPWDARWWDAAGGVVVAMAGNHTLSLFDPVKGTISRFAGTTVE-GLRDGDAA 363

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD---NLFKFG 825
              FAQ SG++++ +   ++  D+E+S++R   L+  G     GG  +      +LF FG
Sbjct: 364 EAFFAQTSGLAVAGE--RLWFVDAETSALR--YLEPAGDDTDGGGYVVHTAVGLDLFTFG 419

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            RDG     LLQHPLGV    +G I VAD+YN  +++ DPA+  VSTL        +D  
Sbjct: 420 HRDGAADTALLQHPLGVTVLPDGAIGVADTYNGAVRRFDPATGEVSTL-------LRD-- 470

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
                L+EP+ ++    G L + ++  + +R LD   +   +   EL   +PPT      
Sbjct: 471 -----LAEPSDLLVTDAGVLVV-ESAAHRLRPLDGEGDTEVVDGAELAVRRPPTVLGSGE 524

Query: 946 KRL 948
            RL
Sbjct: 525 VRL 527


>gi|116672456|ref|YP_833389.1| NHL repeat-containing protein [Arthrobacter sp. FB24]
 gi|116612565|gb|ABK05289.1| NHL repeat containing protein [Arthrobacter sp. FB24]
          Length = 672

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 186/580 (32%), Positives = 283/580 (48%), Gaps = 84/580 (14%)

Query: 438 DWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT       + L+GK+V+LDFWT+CCINC+HVL +L  LE+KY D+  TV GVHS K
Sbjct: 20  NWLNTGGKSLDLESLRGKIVLLDFWTFCCINCLHVLDELRPLEEKYSDVLVTV-GVHSPK 78

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F++E D  A+  AV RY I HPV++D ++  W+     +WPT  V+ P G ++A L+GEG
Sbjct: 79  FEHEADPVALAAAVERYEIHHPVLDDPELETWKAYTARAWPTLVVIDPEGYIVAHLSGEG 138

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR-- 614
           H   L  L+   +  +  K  L     P        P   +  L+FPGK A+ +   R  
Sbjct: 139 HADGLSVLIPELIAQHEAKGTLHRGDGPYVA-----PEPTSGTLRFPGK-ALFLPAGRGT 192

Query: 615 --------------------LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDD- 653
                                 ++D+ H+R+V    D + +++   SG +G  DG   D 
Sbjct: 193 SAIGGPEAKASDAGTSDAGSWLVTDTGHHRLVELGTDFHTVLRTYGSGTKGHADGPGADV 252

Query: 654 ------ATFNRPQGLAY-----NAKKNL-LYVADTENHALREIDFVNDTVRTLAGNGTK- 700
                 A FN PQGL        AK    + +AD+ NH LR +   + TV TL G+G + 
Sbjct: 253 DSVKPTAQFNEPQGLVLLPEDVAAKTGYDVVIADSVNHRLRGLSLADGTVSTLVGSGVQR 312

Query: 701 ------------GSDYQG--GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
                        + + G   +      L+SPWDV +      V +AMAG HQI+    +
Sbjct: 313 LLETGPARVDEDAAGFTGRLSDHPLDVALSSPWDVVWSAKLNAVVVAMAGVHQIFSFDPI 372

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
            G     +G+G E  L+G++     FAQ SG++   D   I+VADSE+S++R L +   G
Sbjct: 373 SGAVSILAGNGLEGLLDGAAH-EAWFAQSSGLAEDAD-GNIWVADSETSALRKLVIDDAG 430

Query: 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
           +  +   +      LF FG RDG  +E  LQHPLGV    +G + +AD+YN  +++ DPA
Sbjct: 431 TVTV---ESAVGKGLFDFGFRDGPAAEARLQHPLGVTVLPDGSVAIADTYNGAVRRYDPA 487

Query: 867 SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN------LFIADTNNNIIRYLDL 920
           +  VST              LA  LSEP+ +I            L + + N + + Y+ +
Sbjct: 488 TGTVST--------------LARGLSEPSDVIVDHTHTAGSEPLLVVVEANKHQLIYVPI 533

Query: 921 NKEEPELQTLELKGVQPPTPKSRSPKRLRRR-SSPDAQTI 959
            KE  ++    ++  +P +P +     L  R ++P  Q +
Sbjct: 534 PKEAQQVDEGAVQTHRPKSPVAPGTLELTVRFTAPTGQKL 573


>gi|359151030|ref|ZP_09183771.1| Redoxin domain-containing protein [Streptomyces sp. S4]
          Length = 568

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/455 (35%), Positives = 246/455 (54%), Gaps = 38/455 (8%)

Query: 466 INCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDM 525
           +NC+HVL +L  LE++++D    +VGVHS KF +E + +A+ +AV RYG+ HPV++D ++
Sbjct: 1   MNCLHVLDELRELEERHRDT-VVIVGVHSPKFVHEAEHQAVVDAVERYGVEHPVLDDPEL 59

Query: 526 NLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
             W++  V +WPT  V+ P G ++AQ AGEGH   ++ LVE     +  K  L     P 
Sbjct: 60  VTWKQYAVRAWPTLVVIDPEGYVVAQHAGEGHAHAIEKLVEELEAEHAAKGTLRRGDGPY 119

Query: 586 SLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIV-QIGSSGEE 644
                  P      L+FPG+ A+ + +    +SD+  +++V    DG  +V +IG  GE 
Sbjct: 120 VA-----PEPVAGALRFPGR-AVLLPSGNFLVSDTTRHQLVELAEDGESVVRRIGGEGER 173

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KG 701
           GL DG   +A F+ PQGL    + + + VADT NHALR ++  +  V T AG G    +G
Sbjct: 174 GLADGGPAEARFSEPQGLVLTPEGDAVIVADTVNHALRRVELASGVVTTPAGTGRQWWQG 233

Query: 702 SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN 761
           S   G  +     L+SPWDV +     K++IAMAG HQ+W +    G     +G   E  
Sbjct: 234 SPTSGPAREVD--LSSPWDVAW--FGGKLWIAMAGTHQLWTYDPQAGTVAVAAGTTNEGL 289

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
           ++G  +    FAQPSG++   D   ++VADSE+S++R ++ +  G+   A G       L
Sbjct: 290 VDGPGA-EAWFAQPSGLAADGD-ARLWVADSETSALRWVDPE--GTVHTAVG-----TGL 340

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
           F FG RDG  ++ L QHPL V    +G + V+D+YNH +++ DPAS  VST         
Sbjct: 341 FDFGHRDGEAAQALFQHPLAVTVLPDGSVAVSDTYNHALRRYDPASGEVST--------- 391

Query: 882 KDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
                LA  L EP+G + A    + +    + + R
Sbjct: 392 -----LATDLREPSGAVLAGEEIVVVESARHRLTR 421



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 9/185 (4%)

Query: 737 QHQIWEHSTVDG--VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
           +HQ+ E +  DG  V R   G+G ER L         F++P G+ L+P+   + VAD+ +
Sbjct: 150 RHQLVELAE-DGESVVRRIGGEG-ERGLADGGPAEARFSEPQGLVLTPEGDAVIVADTVN 207

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
            ++R + L +G     AG         ++     G   EV L  P  V     G++++A 
Sbjct: 208 HALRRVELASGVVTTPAGTG----RQWWQGSPTSGPAREVDLSSPWDV-AWFGGKLWIAM 262

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
           +  H++   DP +  V+  AG    G  DG    A  ++P+G+    +  L++AD+  + 
Sbjct: 263 AGTHQLWTYDPQAGTVAVAAGTTNEGLVDGPGAEAWFAQPSGLAADGDARLWVADSETSA 322

Query: 915 IRYLD 919
           +R++D
Sbjct: 323 LRWVD 327


>gi|418461883|ref|ZP_13032943.1| Peroxiredoxin [Saccharomonospora azurea SZMC 14600]
 gi|359738010|gb|EHK86922.1| Peroxiredoxin [Saccharomonospora azurea SZMC 14600]
          Length = 633

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 183/543 (33%), Positives = 269/543 (49%), Gaps = 39/543 (7%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFL 478
           VE  K+    PE      W NT   PL  R  L+G++V+LDFWT  CINC+HVL +L  L
Sbjct: 9   VEQSKSRVRAPELNGDA-WWNTGGEPLTLR-GLRGRIVLLDFWTSGCINCLHVLDELRPL 66

Query: 479 EKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPT 538
           E+++ D+  T+ GVHS KF +E   +++  AV R G+ HPVV+D DM+LW++  V +WPT
Sbjct: 67  EEEFADVLVTI-GVHSPKFAHEGGRDSVGAAVARLGVEHPVVSDPDMSLWQQYAVKAWPT 125

Query: 539 FAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS----LEKDNDPR 594
             VV P G ++   AGEGH   L  ++   +  + +K  L    L  S      ++ D  
Sbjct: 126 LVVVDPEGYVVHVAAGEGHGDALRRVIGELVEVHERKGTLVRGELDWSEVARARREEDGA 185

Query: 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDA 654
                L+FP K A+     R+ ++D+ ++ I     D   +++    G  G  DG+FD A
Sbjct: 186 ARIDGLRFPSK-AVVTAEGRVLVADTANHSIAEFASDAETLLRRFGDGHRGAVDGAFDVA 244

Query: 655 TFNRPQGLAY------NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
            F  P GL        +     L VADT NH LR +D    +VRT+AG G +  D     
Sbjct: 245 RFAEPSGLTLLPTHVADQVGYHLIVADTANHLLRGVDLRTGSVRTVAGTGAQWRDGDDSG 304

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL 768
             T   L SPWD  +      V +AMAG H +     V G    F+G   E  L    + 
Sbjct: 305 PATEVDLTSPWDARWWDAAGGVVVAMAGNHTLSLFDPVKGTISRFAGTTVE-GLRDGDAA 363

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD---NLFKFG 825
              FAQ SG++++ +   ++  D+E+S++R   L+  G     GG  +      +LF FG
Sbjct: 364 EAFFAQTSGLAVAGE--RLWFVDAETSALR--YLEPAGDDTDGGGYVVHTAVGLDLFTFG 419

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            RDG     LLQHPLGV    +G I VAD+YN  +++ DPA+  VSTL        +D  
Sbjct: 420 HRDGAADTALLQHPLGVTVLPDGAIGVADTYNGAVRRFDPATGEVSTL-------LRD-- 470

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
                L+EP+ ++    G L + ++  + +R LD   +   +   EL   +PPT      
Sbjct: 471 -----LAEPSDLLVTDAGVLVV-ESAVHRLRPLDGEGDTEVVDGAELAVRRPPTVLGSGE 524

Query: 946 KRL 948
            RL
Sbjct: 525 VRL 527


>gi|334335815|ref|YP_004540967.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Isoptericola variabilis 225]
 gi|334106183|gb|AEG43073.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Isoptericola variabilis 225]
          Length = 668

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 181/518 (34%), Positives = 260/518 (50%), Gaps = 71/518 (13%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT        DL+GK+V+LDFWT+CCINC+HVL +L  LE++++D+   VVGVHS KF
Sbjct: 34  WLNTGGRTITLADLRGKIVLLDFWTFCCINCLHVLDELRELEEQFRDV-LVVVGVHSPKF 92

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+  AV RY + HPV++D ++  W      +WPT  VV P G ++AQ+AGEGH
Sbjct: 93  EHEADPVALAAAVERYEVHHPVLDDPELVTWGSYTARAWPTLVVVDPEGYVVAQMAGEGH 152

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
              +  LV   +  +  K  L     P        P   +  L+FP K A+ + N  L +
Sbjct: 153 ASAIAALVRELVGEHEAKGTLHRGDAPYV-----PPEPTSGTLRFPAK-AVALPNGNLLV 206

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA---KKNLLY-- 672
           +D+ H+ +     DG  +V+   SG  GL DG+ D A F+ P GL       +  L Y  
Sbjct: 207 ADAGHHSLAELAPDGETLVRRIGSGARGLVDGAADVARFSEPNGLCLVPEVLRATLGYDV 266

Query: 673 -VADTENHALREIDFVNDTVRTLAGNGTK----GSDYQGGEKGTSQL------------- 714
            VADT NHALR +      V T+AG G +    G +    + G   L             
Sbjct: 267 LVADTVNHALRGVRLETGEVTTVAGTGEQFMVGGPENVLPDDGGPALAFDPAETYPARSV 326

Query: 715 -LNSPWDVCYKPINEKVYIAMAGQHQIW--EHSTVDGVTRAFSG---DGYERNLNGSSSL 768
            L+SPWDV +        +AMAG H +W  E     G  R  +G   +G E    G++  
Sbjct: 327 RLSSPWDVAWSEELGAFVVAMAGNHTLWAFEPGPESGTVRLLAGTMNEGLEDGPGGTA-- 384

Query: 769 NTSFAQPSGIS--LSPDF-MEIYVADSESSSIRALNLKTGGS---RLLAGGDPIFPDNLF 822
              FAQPSG++  L  D    +++AD+E+S++R +     G    R   G        LF
Sbjct: 385 --WFAQPSGLAPVLGSDADGSLWLADAETSALRLVTPAADGQVQVRTAVG------QGLF 436

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
            FG RDG   + LLQHPLGV    +G   VAD+YN  +++ DPASN V+T          
Sbjct: 437 DFGHRDGAADQALLQHPLGVAALSDGSAVVADTYNGALRRYDPASNEVTT---------- 486

Query: 883 DGAALAAQLSEPAGIIEAQNGN----LFIADTNNNIIR 916
               LA+ L+EP+ ++    G+    L +  T + + R
Sbjct: 487 ----LASGLAEPSDVVVQVGGDAVHLLVVESTAHRLTR 520



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 9/108 (8%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       NG + VAD+ +H + +L P    +    G G  G  DGAA  A+ SEP 
Sbjct: 190 LRFPAKAVALPNGNLLVADAGHHSLAELAPDGETLVRRIGSGARGLVDGAADVARFSEPN 249

Query: 896 G------IIEAQNG-NLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           G      ++ A  G ++ +ADT N+ +R + L  E  E+ T+   G Q
Sbjct: 250 GLCLVPEVLRATLGYDVLVADTVNHALRGVRL--ETGEVTTVAGTGEQ 295


>gi|378548897|ref|ZP_09824113.1| hypothetical protein CCH26_02380 [Citricoccus sp. CH26A]
          Length = 708

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 192/563 (34%), Positives = 277/563 (49%), Gaps = 83/563 (14%)

Query: 439 WLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           WLNT   PL     L+GK+V+LDFW++CCINC+HVL +L  LE +Y+D+    VGVHS K
Sbjct: 41  WLNTGGNPLDLAA-LRGKIVILDFWSFCCINCLHVLDELRPLEAEYRDV-LVTVGVHSPK 98

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           FD+E D EA+  AV RY + HPV++D  +  W+     +WPT  VV P G + A L+GEG
Sbjct: 99  FDHEADPEALAAAVERYDVQHPVLDDPALTTWQAYSARAWPTLVVVDPEGYIAAHLSGEG 158

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKL----AI 608
           H   L  LVE  +  +  K          +L + N P +   P    LKFPGK     A 
Sbjct: 159 HVAGLTSLVEELVAEHEAKG---------TLHRGNGPYVPPEPVARDLKFPGKAIALGAR 209

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQ-IGSSGE---------------EGLRDGSFD 652
                   ++D+ H+R+V    D   +V+ IG  GE               +GL DG  D
Sbjct: 210 GAQAGTFLVADTGHHRLVELADDLTTVVRTIGGIGEPGADGGADPATVPGAKGLADGGPD 269

Query: 653 DATFNRPQGLAY------NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTK------ 700
            A FN PQGL        +A    + VAD+ NH LR +   + TVRT+AGNG +      
Sbjct: 270 AALFNEPQGLTLLPQDVADAVGYDVVVADSVNHRLRGVRLADGTVRTVAGNGVQRLIDPE 329

Query: 701 ------GSDYQG----GEKGTSQL---LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD 747
                   D +        GT  L   L+SPWDV +    + + +AMAG HQ++      
Sbjct: 330 RAREAADPDTEATLSLAPFGTDPLRTSLSSPWDVLWSTAEDTLVVAMAGTHQLFSFDPRT 389

Query: 748 GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG- 806
           G    ++G G E   +G  ++   FAQ SG++ S D   I+VADSESS++R ++      
Sbjct: 390 GDLAVYAGTGLEGLEDGDPTV-AWFAQSSGLAESADGT-IWVADSESSALRRISPADPAA 447

Query: 807 -----SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIK 861
                SR ++         LF FG RDG   +   QHPLGV    +G + VAD+YN  I+
Sbjct: 448 ADGALSRRVSSA---VGTGLFDFGFRDGAADQARFQHPLGVAALPDGSVLVADTYNGAIR 504

Query: 862 KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGII-----EAQNGNLFIADTNNNIIR 916
           +  PA      +A  G+      + LA  L EP+ I+     E    ++ + +TN + + 
Sbjct: 505 RYAPAG-----VAPDGRPTEASVSTLARGLKEPSDILVEPDAEGNAASIVVVETNAHQLV 559

Query: 917 YLDLNKEEPELQTLELKGVQPPT 939
            L + +E  ++    L+  +P T
Sbjct: 560 RLSVPEEYLQVDEGALQTHRPRT 582


>gi|414866501|tpg|DAA45058.1| TPA: hypothetical protein ZEAMMB73_922990 [Zea mays]
          Length = 237

 Score =  266 bits (681), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 133/231 (57%), Positives = 171/231 (74%), Gaps = 3/231 (1%)

Query: 859  KIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            +IKKLDP + +V+T+AG G AG++DG  L AQLSEPAG++E  +G L +ADTNNN IRY+
Sbjct: 3    QIKKLDPVTRKVTTIAGTGSAGYRDGPGLTAQLSEPAGLVEVGDGRLLVADTNNNTIRYI 62

Query: 919  DLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLP 978
             L+ +  E++TLEL GVQPP+PK +  KRLRRR S D   I VDGG S EG + L +++P
Sbjct: 63   TLSDKGAEVKTLELIGVQPPSPKPKVLKRLRRRLSADTDVINVDGGSSKEGFLSLAVTVP 122

Query: 979  EEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVYY 1038
            + YHFSKEARSKF V+ EP NAV I+P +G L+ EG A L FRR+S S+S GRI+CKVYY
Sbjct: 123  DGYHFSKEARSKFDVETEPPNAVEIEPANGFLNSEGLASLKFRRISSSLSMGRINCKVYY 182

Query: 1039 CKEDEVCLYKPLLFEVPFQEEV-PNSPPAEITLPYDLKPKILTNSLQLPVA 1088
            CKEDEVCLY+ + F+V F+EE  PN  PA+ITL Y + P+  + S QL  A
Sbjct: 183  CKEDEVCLYQSIAFDVKFREEAEPN--PAQITLSYTVSPRDNSGSTQLLAA 231


>gi|289707042|ref|ZP_06503373.1| antioxidant, AhpC/TSA family [Micrococcus luteus SK58]
 gi|289556228|gb|EFD49588.1| antioxidant, AhpC/TSA family [Micrococcus luteus SK58]
          Length = 703

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 184/539 (34%), Positives = 270/539 (50%), Gaps = 83/539 (15%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   Q    DL+GKVV+LDFWT+CCINC+HVL +L  LE+++ D+    VGVHS KF
Sbjct: 40  WLNTGGEQVTLEDLRGKVVLLDFWTFCCINCLHVLDELHPLEEEFADV-LVTVGVHSPKF 98

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D +A+  AV RY I HPV++D ++  W+     +WPT  VV P G + A L+GEGH
Sbjct: 99  EHEADPDALAAAVERYAIEHPVLDDPELTTWQAYSARAWPTLVVVDPEGYIAAHLSGEGH 158

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGK-LAIDILN 612
              L  LV         ++L+       +L + + P +  +P    L FPGK +++    
Sbjct: 159 VAGLYGLV---------RELVAEHEAKGTLHRGSGPYVPPAPVARDLSFPGKAVSLGGRG 209

Query: 613 NR---LFISDSNHNRI--VVTDLD----------------GNFIVQIGSSGEEGLRDGSF 651
           +R     +SD+ H+R+  V  DL                 G   +   + GE+G  DG  
Sbjct: 210 SRPGSFLVSDTGHHRLLEVAEDLTTVLRAFGGGDPATADAGQAELAFPTPGEKGHADGGP 269

Query: 652 DDATFNRPQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKG---- 701
           D+A FN PQGLA    +  + + Y   VAD+ NH LR +   +  V TLAGNG +     
Sbjct: 270 DEALFNEPQGLALLPEDVAERVGYDVVVADSVNHRLRGLRLSDGHVSTLAGNGVQKLIDS 329

Query: 702 -------------------SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWE 742
                              +D  G  + T+  L+SPWDV + P   +V IAMAG HQ+++
Sbjct: 330 ERAKEAAAVEDEEDVAVDLADLPG--EPTAISLSSPWDVVWHPALGRVVIAMAGTHQLFD 387

Query: 743 HSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
              V G     +G   E  L+G +     FAQPSG+S+  D   ++VADSE+S++R +  
Sbjct: 388 FDPVTGALAVHAGTALEGLLDGDAG-RAWFAQPSGLSVGADGA-LWVADSETSAVRWVRT 445

Query: 803 KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
              G R +          LF FG  DG      LQHPLGV    +G + +AD+YN  I++
Sbjct: 446 GEDGRREVG---TAVGAGLFDFGHVDGEADRARLQHPLGVTALPDGSVLIADTYNGAIRR 502

Query: 863 LDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
             PA    +     G+A     + +A  L EP+ ++   +     AD N+  I  ++ N
Sbjct: 503 YAPAGEDAA-----GRAVPATVSTVARGLLEPSDVLVEHD-----ADGNDTAIVVVESN 551


>gi|317123437|ref|YP_004097549.1| NHL repeat containing protein [Intrasporangium calvum DSM 43043]
 gi|315587525|gb|ADU46822.1| NHL repeat containing protein [Intrasporangium calvum DSM 43043]
          Length = 624

 Score =  266 bits (679), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 241/459 (52%), Gaps = 54/459 (11%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT        D +G+V+VLDFWT+CC+NC+HVL +L  +E +Y D   T+VGVHS KF
Sbjct: 23  WLNTGGRALSLADFRGRVLVLDFWTFCCVNCLHVLDELRPVEAQYPDA-LTIVGVHSPKF 81

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D +A+  AV RY + HPV++D ++  WR     +WPT  VV P G ++A ++GEGH
Sbjct: 82  EHEADPDALAAAVERYAVHHPVLDDPELVTWRAYTARAWPTLVVVDPEGYVVASMSGEGH 141

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP------LKFPGKLAIDIL 611
              L  LV   +  +  K          +L+   DP  F  P      L+FPGK+ + + 
Sbjct: 142 GPGLAALVGELIEEHAAKG---------TLQPGGDP--FVPPPAPDTALRFPGKV-VALD 189

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL- 670
           +    +SD+ ++++V   L+ +   +    G  G+          N PQGL     K   
Sbjct: 190 DGSFVVSDTANHQVV--HLEADLETERRRWGGPGV---------LNEPQGLVLATSKVRD 238

Query: 671 -----LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
                L VAD+ NH ++ I F + T+  L G G +    +GG     Q L++PWD+ +  
Sbjct: 239 QYGVDLVVADSVNHQVKGIRFSDGTIHPLVGTGRQLRQRRGGAPARQQDLSTPWDLAW-- 296

Query: 726 INEKVYIAMAGQHQIWEHS---------TVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           ++ ++ IAMAG HQ+W  S         T  G     +G   E  L         FAQPS
Sbjct: 297 LDGRLIIAMAGTHQLWAWSPAGPPETAPTPGGTVEVIAGTTNE-GLRDGPGAQAWFAQPS 355

Query: 777 GISLSPDFMEIYVADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           G+  S D   ++VADSE+S++R++ +  TGG  +           LF FG RDG  ++ L
Sbjct: 356 GLCTSADGRRVWVADSETSALRSVAIDDTGGLTVQTH----VGTGLFDFGHRDGPAAQAL 411

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           LQHPLGV    +G + V+D+YN  I++ DP +  V+TLA
Sbjct: 412 LQHPLGVTELPDGSVAVSDTYNGAIRRYDPVTGEVTTLA 450


>gi|257057817|ref|YP_003135649.1| Peroxiredoxin [Saccharomonospora viridis DSM 43017]
 gi|256587689|gb|ACU98822.1| Peroxiredoxin [Saccharomonospora viridis DSM 43017]
          Length = 644

 Score =  266 bits (679), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 173/524 (33%), Positives = 263/524 (50%), Gaps = 45/524 (8%)

Query: 439 WLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           W NT   PL     L+GK+V+LDFWT  CINC+HVL +L  LE ++ D+  TV GVHS K
Sbjct: 28  WWNTGGRPLTLA-GLRGKIVLLDFWTSGCINCLHVLDELRPLEAEFADVLVTV-GVHSPK 85

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F +E D E++  AV RYG+ HPVV+D DM+LW++  V +WPT  ++ P G ++   AGEG
Sbjct: 86  FAHEGDRESVAAAVARYGVEHPVVSDPDMSLWQQYAVKAWPTLVLIDPEGYVVHVAAGEG 145

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILN 612
           H   L  +++  +  +  K  L   PL  +           S     L+FP K A+    
Sbjct: 146 HGDALRRVIQELVSLHEGKGTLRRGPLDWTEAACVAAESAASTGADGLRFPAK-AVVTAE 204

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY------NA 666
            R+ ++D+ ++ +     D   +++    G  G  DG+FD A F  P GL        + 
Sbjct: 205 GRILVADTANHSVAEFASDAETLLRRFGDGRRGAVDGAFDVARFAEPSGLTLLPTHIADE 264

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
               L VADT NH LR +D     VRT+AG G +  D           L SPWDV +  +
Sbjct: 265 VGYHLLVADTANHLLRGVDLRTGAVRTVAGTGRQWRDGDDSGAALEVDLTSPWDVRWWDV 324

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
              V +AMAG H +     + G    F+G   E   +G       FAQ SG++++ +   
Sbjct: 325 AGGVVVAMAGNHTLGLFDPIRGTISRFAGTTVEGLRDGPVD-EAFFAQTSGLAVAGE--R 381

Query: 787 IYVADSESSSIRALNLKTGGS-----RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
           +++ D+E+S++R +    G +     R + G       +LF FG RDG  +E LLQHPLG
Sbjct: 382 LWLVDAETSALRYVERDPGSADEDTPRFVVG--TAVGHDLFTFGHRDGSAAEALLQHPLG 439

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
                +G + VAD+YN  +++ DPA+  ++TL        + G      L+EP+G++   
Sbjct: 440 ATVLPDGAVAVADTYNGAVRRFDPATGEMTTL--------RRG------LAEPSGLVVTD 485

Query: 902 NGNLFIADTNNNIIRYLDLNKEEPEL---QTL---ELKGVQPPT 939
           +G L +    + +    D   +E      +T+   EL   +PPT
Sbjct: 486 SGVLVVESAAHRLRPLADGGGDEAATARGETMAGDELAVRRPPT 529


>gi|302531208|ref|ZP_07283550.1| NHL repeat-containing protein [Streptomyces sp. AA4]
 gi|302440103|gb|EFL11919.1| NHL repeat-containing protein [Streptomyces sp. AA4]
          Length = 609

 Score =  265 bits (678), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 178/519 (34%), Positives = 261/519 (50%), Gaps = 43/519 (8%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE    + WLNT   Q     L+G+VV+LDFWT  CINC+HVL +L  LE+++ D+  TV
Sbjct: 4   PELTGDV-WLNTGGRQLSLAQLRGRVVLLDFWTSGCINCLHVLDELRPLEQEFADVLVTV 62

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
            GVHS KF  E +  +I  AV RY + HPVVND  M LW +  V +WPT  VV P G ++
Sbjct: 63  -GVHSPKFSREGERTSIEAAVRRYEVHHPVVNDPKMELWSQYAVRAWPTLVVVDPEGYVV 121

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLL---DNTPLPLSLEKDNDPRLFTSPLKFPGKL 606
              AGEGH + L  ++   +  +  K  L    N  +P+  ++        + L+FP K 
Sbjct: 122 HVAAGEGHGEALRRVIADLVAKHDAKGTLRRGGNPYVPVEEQR--------TELRFPSK- 172

Query: 607 AIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY-- 664
           A+     R+ ++D+ H+ IV    DG  +++   SG  G +DG FD A F  P G+A   
Sbjct: 173 AVVTAGGRILVADTGHHSIVEFASDGETVIRRFGSGVRGTQDGPFDLAQFAEPAGIALLP 232

Query: 665 -NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWD 720
               +   Y   VADT  H LR +D     V+T+AG G +  D     K     L SPWD
Sbjct: 233 NEVAERAGYHAIVADTAGHRLRGLDLNTGEVKTVAGTGKQWRDGTDTGKALDIDLTSPWD 292

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           V +      V +AMAG H +     V G  R F+G   E  L         FAQ SG ++
Sbjct: 293 VTWWAPAGGVVVAMAGNHTLSVFDPVSGTIRRFAGTTVE-GLRDGDVHEAFFAQTSGFAV 351

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
             D  ++++ D+E+S++R +    G S  +         +LF FG  DG   + LLQHPL
Sbjct: 352 --DGQKLWLVDAETSALRWIE-PAGESFSV---HTAVGTDLFTFGHADGPSDQALLQHPL 405

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           G+    +G+I +AD+YN  I++ DP +  V+TLA     GF          +EP G++  
Sbjct: 406 GLAVLSDGRIAIADTYNGAIRRYDPFTRDVTTLA----TGF----------AEPQGLVR- 450

Query: 901 QNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
            +G L++ ++  N +  L  N +   +        +PPT
Sbjct: 451 HDGELYVVESAGNRVTPLGGNGQATAVAGKRQAVRRPPT 489


>gi|257069643|ref|YP_003155898.1| NHL repeat protein [Brachybacterium faecium DSM 4810]
 gi|256560461|gb|ACU86308.1| NHL repeat protein [Brachybacterium faecium DSM 4810]
          Length = 697

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/460 (35%), Positives = 244/460 (53%), Gaps = 37/460 (8%)

Query: 439 WLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   +   + L+GK+V+LDFWT+CC+NC+HVL +L  LE+K+      V+GVHS KF
Sbjct: 25  WLNTGGAELDLEALRGKIVLLDFWTFCCVNCLHVLDELRPLEEKWA-QELVVIGVHSPKF 83

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           + EKD EA+   + RY +SHPV++D ++  W E G  +WPT  V+  +G++   L+GEGH
Sbjct: 84  EFEKDPEALAANIERYEVSHPVIDDPELETWTEYGARAWPTLMVLDTHGRIAGNLSGEGH 143

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
             +LD LVE  +        L   P P  L  +  P+     L+FP KL + + + RL +
Sbjct: 144 AANLDRLVEQLVAEGEADGSLRRGPAPTVL-AERSPQT----LRFPSKLTL-LPDGRLVV 197

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL------L 671
           SD+  +R+VV + DG  +     +G  G  DG  + A F  P G+    ++        L
Sbjct: 198 SDAGQHRLVVFENDGVTVDAAIGTGRRGHADGDEETAQFAEPNGVLALPREVADEVGYDL 257

Query: 672 YVADTENHALREIDFVND---------TVRTLAGNG---TKGSDYQGGEKGTSQL-LNSP 718
            V DT  H LR +    D          V T+AG+G    +G+    GE       L++P
Sbjct: 258 LVVDTAGHRLRGVKVGQDRLLRSRTATEVTTVAGSGEQWMQGAPLPRGEGDARTFALSTP 317

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
           WD+ +  +  +  IAMAG HQ+W    V G     +G   E  ++G  ++ + +AQPSG+
Sbjct: 318 WDLTWSHVLNRAVIAMAGVHQLWTFDPVAGTLMVLAGTTQEGLVDG-PAVTSWWAQPSGL 376

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
              PD   I VADSE+S++R L+ ++     L G      + LF FG  DG  S   LQH
Sbjct: 377 DELPDG-RIVVADSETSAVRVLDPRSMQVTTLVG------EGLFDFGHVDGPASTARLQH 429

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLD--PASNRVSTLAGI 876
           PL V    +G+I V+D+YN  I+ ++  PA    +T  GI
Sbjct: 430 PLAVTALPDGRIAVSDTYNGAIRLVEEAPAEGERATTGGI 469



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 42/296 (14%)

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQ--IWEHSTVDGVT-RAFSGDGYERNLNGSSSLN 769
           Q L  P  +   P + ++ ++ AGQH+  ++E+   DGVT  A  G G   + +G     
Sbjct: 179 QTLRFPSKLTLLP-DGRLVVSDAGQHRLVVFEN---DGVTVDAAIGTGRRGHADGDEE-T 233

Query: 770 TSFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
             FA+P+G+   P  +      ++ V D+    +R   +K G  RLL          +  
Sbjct: 234 AQFAEPNGVLALPREVADEVGYDLLVVDTAGHRLR--GVKVGQDRLLRSRTATEVTTVAG 291

Query: 824 FGDR----------DGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVST 872
            G++          +G      L  P  + +     +  +A +  H++   DP +  +  
Sbjct: 292 SGEQWMQGAPLPRGEGDARTFALSTPWDLTWSHVLNRAVIAMAGVHQLWTFDPVAGTLMV 351

Query: 873 LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLEL 932
           LAG  + G  DG A+ +  ++P+G+ E  +G + +AD+  + +R LD       +Q   L
Sbjct: 352 LAGTTQEGLVDGPAVTSWWAQPSGLDELPDGRIVVADSETSAVRVLDPRS----MQVTTL 407

Query: 933 KG--------VQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEE 980
            G        V  P   +R    L   + PD +  V D   +  G I L    P E
Sbjct: 408 VGEGLFDFGHVDGPASTARLQHPLAVTALPDGRIAVSD---TYNGAIRLVEEAPAE 460


>gi|444306537|ref|ZP_21142300.1| NHL repeat containing protein [Arthrobacter sp. SJCon]
 gi|443481173|gb|ELT44105.1| NHL repeat containing protein [Arthrobacter sp. SJCon]
          Length = 673

 Score =  264 bits (674), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 281/581 (48%), Gaps = 85/581 (14%)

Query: 438 DWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT       + L+GK+V+LDFWT+CCINC+HVL +L  LE++Y D+    VGVHS K
Sbjct: 20  NWLNTGGKTLDLEALRGKIVLLDFWTFCCINCLHVLDELRPLEEEYSDV-LVTVGVHSPK 78

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F++E D  A+  AV RY I HPV++D +++ W+     +WPT  V+ P G ++A L+GEG
Sbjct: 79  FEHEADPVALAAAVERYEIHHPVLDDPELDTWKAYTARAWPTLVVIDPEGYIVAHLSGEG 138

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR-- 614
           H   L  L+   +  +  K  L     P        P   +  L+FPGK A+ +   R  
Sbjct: 139 HADGLAVLIPELIAEHEAKGTLHRGSGPYVA-----PEPTSGTLRFPGK-ALFLPAGRGS 192

Query: 615 ------------------------LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDG- 649
                                     ++D+ H+R+V    D   ++    SG +G  DG 
Sbjct: 193 GADEASDGGPAAGAAVKDAAEKGSWLVTDTGHHRVVELGTDFTTVLATFGSGTKGYADGP 252

Query: 650 -SFDDAT--FNRPQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTK 700
            + D AT  FN PQGL     +    + Y   +AD+ NH LR +   +    TLAGNG +
Sbjct: 253 AAGDTATAQFNEPQGLVLLPEDVAAKVGYDVVIADSVNHRLRGLSLTDGKASTLAGNGVQ 312

Query: 701 -------------GSDYQGGEKGT--SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
                         + + G   G      L+SPWD+ +      V IAMAG HQI+    
Sbjct: 313 RLLETGPARVDEDAAGFTGRLSGHPLEVSLSSPWDLVWSRKLNAVVIAMAGTHQIFSFDP 372

Query: 746 VDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
           V G     +G+G E  L+G +     FAQPSG++   D   I+VADSE+S++R L +   
Sbjct: 373 VSGEVDIIAGNGLEGLLDGPAH-EAWFAQPSGLAEDGD-GNIWVADSETSALRKLVIDDA 430

Query: 806 GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
           GS  +   +      LF FG RDG   E  LQHPLGV    +G + +AD+YN  +++ DP
Sbjct: 431 GSITV---ESALGKGLFDFGFRDGPAVEARLQHPLGVTVLPDGSVAIADTYNGAVRRYDP 487

Query: 866 ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN------LFIADTNNNIIRYLD 919
           ++  VST              LA  L EP+ +I     +      L + + N + + Y+ 
Sbjct: 488 SAGTVST--------------LARGLLEPSDVIVDHTHSAGSEPLLVVVEANQHQLVYVP 533

Query: 920 LNKEEPELQTLELKGVQPPTPKSRSPKRLRRR-SSPDAQTI 959
           + KE  ++     +  +P +P +  P  L  R ++P  Q +
Sbjct: 534 IPKEAQQVDEGASQTHRPKSPVAPGPLELTVRFTAPTGQKL 574


>gi|134103740|ref|YP_001109401.1| NHL repeat-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007734|ref|ZP_06565707.1| NHL repeat-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133916363|emb|CAM06476.1| NHL repeat containing protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 619

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 173/466 (37%), Positives = 243/466 (52%), Gaps = 34/466 (7%)

Query: 422 ENRKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           + R+     PE   +  WLNT   +    D +GKV+VLDFWT+CCINC+HVL +L  LE+
Sbjct: 6   QKRRARVRAPELVGRR-WLNTGGREMSLHDFRGKVLVLDFWTFCCINCLHVLDELRPLEE 64

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           ++ D    VVGVHS KF++E D +A+  AV RY + HPV++D ++  W+   V +WPT  
Sbjct: 65  EFADE-VVVVGVHSPKFEHEADPDAVAAAVQRYAVHHPVLDDPELTTWQHYAVKAWPTLV 123

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP-LSLEKDNDPRLFTSP 599
           VV P G ++   AGEGH + L  +V   +  +  K  L     P +  E +N      + 
Sbjct: 124 VVDPEGYVVHVAAGEGHVETLRGVVAELVAEHDAKGTLHRGDGPYVPAETEN------TT 177

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L+FP K+ + +    L +SDS H+ +V    DG   V+   SGE G  DG+ D+A+F  P
Sbjct: 178 LRFPAKV-LPLDGGTLLVSDSAHHSLVEFTADGETPVRRIGSGERGRADGAADEASFAEP 236

Query: 660 QGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
            GLA    +    + Y   VADT NH LR +   +  V T+AG G +  D          
Sbjct: 237 AGLALLPEDVAAEVGYDVVVADTVNHLLRGVQLADGEVVTVAGTGEQWRDGSDAGPALET 296

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
            L SPWDV +      V IAMAG H +       G  R F+G   E   +G +     FA
Sbjct: 297 PLTSPWDVAWWEPAGGVVIAMAGNHTLGLFDPRAGQVRRFAGTTVEGLRDGDAD-EAFFA 355

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI-----FPDNLFKFGDRD 828
           Q SG++   D   +++ADSE+S++R +          AGGD           LF FG  D
Sbjct: 356 QTSGLADGGD--RLWLADSETSALRWVE---------AGGDGFAVRTAVGAGLFDFGHAD 404

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           G   + L QHPLGV    +G + V D+YN  I++ DPAS+ VSTLA
Sbjct: 405 GAADQALFQHPLGVAVLPDGSVAVCDTYNGAIRRYDPASDEVSTLA 450



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P  V     G + V+DS +H + +            G G+ G  DGAA  A  +EPA
Sbjct: 178 LRFPAKVLPLDGGTLLVSDSAHHSLVEFTADGETPVRRIGSGERGRADGAADEASFAEPA 237

Query: 896 GI------IEAQNG-NLFIADTNNNIIRYLDLNKEE 924
           G+      + A+ G ++ +ADT N+++R + L   E
Sbjct: 238 GLALLPEDVAAEVGYDVVVADTVNHLLRGVQLADGE 273


>gi|348175195|ref|ZP_08882089.1| NHL repeat-containing protein [Saccharopolyspora spinosa NRRL
           18395]
          Length = 630

 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 166/462 (35%), Positives = 237/462 (51%), Gaps = 28/462 (6%)

Query: 422 ENRKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           + R+     PE   +  WLNT   + R  D +GKV+VLDFWT+CCINC+HVL +L  LE 
Sbjct: 19  QKRRARVRAPELVGR-QWLNTGGKELRLADFRGKVLVLDFWTFCCINCLHVLDELRPLEA 77

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +  D    +VGVHS KF++E D +A+  AV RY + HPV++D ++  W+   V +WPT  
Sbjct: 78  ELADE-VVIVGVHSPKFEHEADPDALIAAVERYAVHHPVLDDPELITWQNYAVKAWPTLV 136

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPL 600
           VV P G +    AGEGH + L  ++   +  +  K  L     P        P    + L
Sbjct: 137 VVDPEGYVAHVAAGEGHVEALRSVITEVVAEHAAKGTLHRGDGPYV-----PPEAPATTL 191

Query: 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           +FPGK+ I +    L +SDS ++ +V    DG  +V+   +G+ G  DG    A F  P 
Sbjct: 192 RFPGKV-IALPGGNLLVSDSANHSLVEFAADGETVVRRIGTGQRGRADGVA--AEFAEPA 248

Query: 661 GLAYNAKKNL------LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
           GLA   ++        + VADT NH LR +  V+  V TLAG G +  D           
Sbjct: 249 GLALLPQRVAEQVGYDVVVADTVNHLLRGVRLVDGQVTTLAGTGEQWRDGSDSGPALETP 308

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
           L SPWD+ +      V IAMAG H +     V G  R F+G   E   +G++     FAQ
Sbjct: 309 LTSPWDLAWWEPAGGVVIAMAGNHTLGLFDPVTGGVRRFAGTTVEGLRDGAAD-EAFFAQ 367

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGS 832
            SG++   D   +++ADSE+S++R +     G   R   G        LF FG  DG   
Sbjct: 368 TSGLADGGD--RLWLADSETSALRWVEAADRGFAVRTAVG------TGLFDFGHADGTAD 419

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           + L QHPLGV    +G + V D+YN  +++ +PA+  VSTLA
Sbjct: 420 KALFQHPLGVAVLPDGSVAVCDTYNGAVRRYEPATGEVSTLA 461



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 33/277 (11%)

Query: 659 PQGLAYNAKKNLLYVADTENH--ALREIDFVNDTVRTLAGNGT--KGSDYQGGEKGTSQL 714
           P  +  + +  + +VA  E H  ALR +  + + V   A  GT  +G       +  +  
Sbjct: 133 PTLVVVDPEGYVAHVAAGEGHVEALRSV--ITEVVAEHAAKGTLHRGDGPYVPPEAPATT 190

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS-GDGYERNLNGSSSLNTSFA 773
           L  P  V   P    + ++ +  H + E +  DG T     G G     +G ++    FA
Sbjct: 191 LRFPGKVIALP-GGNLLVSDSANHSLVEFAA-DGETVVRRIGTGQRGRADGVAA---EFA 245

Query: 774 QPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
           +P+G++L P  +      ++ VAD+ +  +R + L  G    LAG    +         R
Sbjct: 246 EPAGLALLPQRVAEQVGYDVVVADTVNHLLRGVRLVDGQVTTLAGTGEQW---------R 296

Query: 828 DGMGSEVLLQHPLG-----VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
           DG  S   L+ PL       +    G + +A + NH +   DP +  V   AG    G +
Sbjct: 297 DGSDSGPALETPLTSPWDLAWWEPAGGVVIAMAGNHTLGLFDPVTGGVRRFAGTTVEGLR 356

Query: 883 DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           DGAA  A  ++ +G+ +  +  L++AD+  + +R+++
Sbjct: 357 DGAADEAFFAQTSGLADGGD-RLWLADSETSALRWVE 392



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 100/259 (38%), Gaps = 28/259 (10%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP----- 725
           L V+D+ NH+L E     +TV    G G +G        G +     P  +   P     
Sbjct: 205 LLVSDSANHSLVEFAADGETVVRRIGTGQRGR-----ADGVAAEFAEPAGLALLPQRVAE 259

Query: 726 -INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS---LNTSFAQPSGISLS 781
            +   V +A    H +     VDG     +G G E+  +GS S   L T    P  ++  
Sbjct: 260 QVGYDVVVADTVNHLLRGVRLVDGQVTTLAGTG-EQWRDGSDSGPALETPLTSPWDLAWW 318

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                + +A + + ++   +  TGG R  AG            G RDG   E       G
Sbjct: 319 EPAGGVVIAMAGNHTLGLFDPVTGGVRRFAG--------TTVEGLRDGAADEAFFAQTSG 370

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA----GFKDGAALAAQLSEPAGI 897
           +    + ++++ADS    ++ ++ A    +    +G      G  DG A  A    P G+
Sbjct: 371 LADGGD-RLWLADSETSALRWVEAADRGFAVRTAVGTGLFDFGHADGTADKALFQHPLGV 429

Query: 898 IEAQNGNLFIADTNNNIIR 916
               +G++ + DT N  +R
Sbjct: 430 AVLPDGSVAVCDTYNGAVR 448


>gi|385680260|ref|ZP_10054188.1| NHL repeat-containing protein [Amycolatopsis sp. ATCC 39116]
          Length = 597

 Score =  262 bits (670), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 184/520 (35%), Positives = 270/520 (51%), Gaps = 49/520 (9%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE    + WLNT         L+GK+V+LDFWT  CINC+HVL +L  LE+++ D+  T+
Sbjct: 4   PELAGDV-WLNTGGETVTLAQLRGKIVLLDFWTSGCINCLHVLDELRPLEEEFADVLVTI 62

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
            GVHS KF +E +  AI  AV RY + HPV+ND DM  W +  V +WPT  +V P G ++
Sbjct: 63  -GVHSPKFLHEGEAAAIEAAVRRYEVHHPVLNDPDMTTWSQYAVKAWPTLVIVDPQGYVV 121

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLL---DNTPLPLSLEKDNDPRLFTSPLKFPGKL 606
              AGEGH + L  +V   +  +  K  L    N  +P+  E+  D       L+FP K 
Sbjct: 122 HTAAGEGHAEALRRVVAELVETHDAKGTLRRGGNPYVPVE-EQPAD-------LRFPSK- 172

Query: 607 AIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY-- 664
           A+     R+ ++D+ ++ I     DG  +++   SG  G  DG+FD A+F  P GLA   
Sbjct: 173 AVVTAEGRILVADTGNHSIAEFASDGETLIRRFGSGARGRADGAFDVASFAEPSGLALLP 232

Query: 665 -----NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
                 A  +LL VADT NH LR +D V   V T+AG G +  D +      S  L SPW
Sbjct: 233 AEVADQAGYHLL-VADTANHLLRGVDLVTGEVTTVAGTGNQWRDGETDGDALSIDLTSPW 291

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           DV +        +AMAG H +       G    F+G   E   +G+++    F Q SG++
Sbjct: 292 DVIWWEPAGGAVVAMAGNHTLGLFDPRTGRISRFAGTTVEGLRDGAAA-EAFFGQTSGLA 350

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +  D   +++AD+E+S++R   L+ G      G D      LF FG RDG  ++ LLQHP
Sbjct: 351 VQGD--RLWLADAETSALR--YLEDGAVHTAIGTD------LFSFGHRDGDAADALLQHP 400

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
           LGV    +G I +AD+YN  ++  DPAS +VSTLA       KD       L+EP+G++ 
Sbjct: 401 LGVAVLADGTIAIADTYNGAVRHYDPASGKVSTLA-------KD-------LAEPSGLLV 446

Query: 900 AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
             +  L + ++  + +  L L  +  ++    L   +PPT
Sbjct: 447 TGDA-LLVVESAAHRLTALPLTADGQQVAGDALAVRRPPT 485


>gi|331695856|ref|YP_004332095.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Pseudonocardia dioxanivorans CB1190]
 gi|326950545|gb|AEA24242.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Pseudonocardia dioxanivorans CB1190]
          Length = 601

 Score =  262 bits (670), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 160/448 (35%), Positives = 248/448 (55%), Gaps = 33/448 (7%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WL T        DL+GK+V+LDFWT+CC+NC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 13  WLGTGGRDLSLADLRGKIVLLDFWTFCCVNCLHVLDELRPLEERWSDVLVTV-GVHSPKF 71

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D +A+  AV RYG+ HPV++D  +  W      +WPT  V+ P G ++AQL+GEGH
Sbjct: 72  VHEGDPDAVEAAVERYGVGHPVLDDPTLQTWDAYAARAWPTLVVIDPTGYVVAQLSGEGH 131

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF----TSPLKFPGKLAIDILNN 613
              LD L+          +L+       +L + + P +      + L+FPGK+ I +   
Sbjct: 132 AHGLDVLI---------GELVAEHEAAGTLHRGDGPYIAPAEPETALRFPGKV-IALPGG 181

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA---YNAKKNL 670
              +SD+ H+++V  +LD + + +    G+         D  F+ PQGL     +   ++
Sbjct: 182 SYLVSDTAHHQLV--ELDEDLVTERRRIGDGRRGLRDGADPEFSEPQGLVALPADVAADV 239

Query: 671 LY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
            Y   VAD+ NHALR +   +  VRTLAG G +  + +     T++ L++PWDV +   +
Sbjct: 240 GYDVVVADSVNHALRGLRLSSGEVRTLAGTGAQLRE-RIAVGATAEELSTPWDVAW--WD 296

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +V +AMAG HQ+W      G T   +G   E   +G  + +  FAQPSG+++  +   +
Sbjct: 297 GRVVVAMAGSHQLWSFDPRTGTTTVLAGTTNEGLRDGPLT-DAFFAQPSGLAVGTN-ATL 354

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG-SEVLLQHPLGVYCAK 846
           +VADSE+S++R++         +     +    LF FG RDG    E LLQHPLGV    
Sbjct: 355 WVADSETSAVRSVVASPAAGAAVTTAVGL---GLFDFGFRDGSAPDEALLQHPLGVAVLP 411

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA 874
           +G + +AD+YN  +++ DPA+  VSTLA
Sbjct: 412 DGSVAIADTYNGALRRYDPATRTVSTLA 439



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 15/155 (9%)

Query: 769 NTSFAQPSG-ISLSPDFM-----EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
           +  F++P G ++L  D       ++ VADS + ++R L L +G  R LAG          
Sbjct: 219 DPEFSEPQGLVALPADVAADVGYDVVVADSVNHALRGLRLSSGEVRTLAG-------TGA 271

Query: 823 KFGDRDGMGSEVL-LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
           +  +R  +G+    L  P  V    +G++ VA + +H++   DP +   + LAG    G 
Sbjct: 272 QLRERIAVGATAEELSTPWDV-AWWDGRVVVAMAGSHQLWSFDPRTGTTTVLAGTTNEGL 330

Query: 882 KDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           +DG    A  ++P+G+    N  L++AD+  + +R
Sbjct: 331 RDGPLTDAFFAQPSGLAVGTNATLWVADSETSAVR 365



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           + VA + S  + + + +TG + +LAG            G RDG  ++     P G+    
Sbjct: 299 VVVAMAGSHQLWSFDPRTGTTTVLAG--------TTNEGLRDGPLTDAFFAQPSGLAVGT 350

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLA-----GIGKAGFKDGAAL-AAQLSEPAGIIEA 900
           N  ++VADS    ++ +  +    + +      G+   GF+DG+A   A L  P G+   
Sbjct: 351 NATLWVADSETSAVRSVVASPAAGAAVTTAVGLGLFDFGFRDGSAPDEALLQHPLGVAVL 410

Query: 901 QNGNLFIADTNNNIIRYLD 919
            +G++ IADT N  +R  D
Sbjct: 411 PDGSVAIADTYNGALRRYD 429


>gi|284034698|ref|YP_003384629.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Kribbella flavida DSM 17836]
 gi|283813991|gb|ADB35830.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Kribbella flavida DSM 17836]
          Length = 594

 Score =  262 bits (669), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 169/501 (33%), Positives = 253/501 (50%), Gaps = 65/501 (12%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE   +  WLNT   + R  D +G++++LDFWT+CCINC+HVL +L  LE+KY D    +
Sbjct: 6   PELKGR-GWLNTGGAELRLADFRGRLLLLDFWTFCCINCLHVLDELRPLEEKYGDA-LVI 63

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS KF +E +  A++ AV RY + HPV++D ++  W+     +WPT  +V PNG ++
Sbjct: 64  VGVHSPKFAHEGEEVAVKAAVARYEVGHPVLDDPELVTWQNYTARAWPTLVLVDPNGYIV 123

Query: 550 AQLAGEGHRKDLD----DLV----EAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLK 601
           AQ +GEGH   LD    +L+    +A  L  G+   +   P P             + L+
Sbjct: 124 AQYSGEGHAHALDAQLAELIAQHEQAGTLTRGRSPYVAPEPEP-------------TELR 170

Query: 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
           FP K  +   +N   ++D+ ++ +V    D   +V+   +   G +DG  D + F+ P G
Sbjct: 171 FPAK--VIAYDNGFLVADAGNHSVVQLAEDATTVVRRFGTRRRGFQDGPADQSAFSEPNG 228

Query: 662 LAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           L          + Y   VADT NHALR I       RTLAG G +  D  G     + +L
Sbjct: 229 LTLLPAEVATEVGYDVVVADTVNHALRGITLATGETRTLAGTGKQWMDGDG-----TDVL 283

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
           +SPWDV +    +KV+IAMAG HQ+W      G T   +G   E   +G+      FAQ 
Sbjct: 284 SSPWDVAW--WQDKVWIAMAGVHQLWTFDPFTGATEIAAGTTNEGLRDGTPE-QAWFAQT 340

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           SG++   D   +++ADSE S++R ++ +   +             LF FG RDG   E L
Sbjct: 341 SGLAADGD--RLWLADSEISALRWIDTEVHTA---------VGTGLFDFGLRDGKADEAL 389

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           LQHPLGV    +G I +AD+YN  +++ D     V T              +A  L+EP+
Sbjct: 390 LQHPLGVTVLPDGSIAIADTYNGAVRRYDGRQGTVET--------------MATGLAEPS 435

Query: 896 GIIEAQNGNLFIADTNNNIIR 916
           G +   N  L +    + + R
Sbjct: 436 GAVVVGNELLVVESAAHRLTR 456



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 56/203 (27%)

Query: 769 NTSFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD--- 819
            ++F++P+G++L P  +      ++ VAD+ + ++R + L TG +R LAG    + D   
Sbjct: 220 QSAFSEPNGLTLLPAEVATEVGYDVVVADTVNHALRGITLATGETRTLAGTGKQWMDGDG 279

Query: 820 -------------------------NLFKF----------------GDRDGMGSEVLLQH 838
                                     L+ F                G RDG   +     
Sbjct: 280 TDVLSSPWDVAWWQDKVWIAMAGVHQLWTFDPFTGATEIAAGTTNEGLRDGTPEQAWFAQ 339

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSEPAG 896
             G+  A   ++++ADS    ++ +D     V T  G G    G +DG A  A L  P G
Sbjct: 340 TSGL-AADGDRLWLADSEISALRWID---TEVHTAVGTGLFDFGLRDGKADEALLQHPLG 395

Query: 897 IIEAQNGNLFIADTNNNIIRYLD 919
           +    +G++ IADT N  +R  D
Sbjct: 396 VTVLPDGSIAIADTYNGAVRRYD 418


>gi|375103275|ref|ZP_09749538.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           cyanea NA-134]
 gi|374664007|gb|EHR63885.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           cyanea NA-134]
          Length = 638

 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 174/523 (33%), Positives = 262/523 (50%), Gaps = 49/523 (9%)

Query: 439 WLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           W NT   PL     L+GK+V+LDFWT  C+NC+HVL +L  LE+++ D+  TV GVHS K
Sbjct: 28  WWNTGGEPLTLA-GLRGKIVLLDFWTSGCVNCLHVLDELRPLEEEFADVLVTV-GVHSPK 85

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F +E   +++  AV R G+ HPVV+D DM+LW++  V +WPT  VV P G ++   AGEG
Sbjct: 86  FVHEGGRDSVAAAVARLGVDHPVVSDPDMSLWQQYAVKAWPTLVVVDPEGYVVHVAAGEG 145

Query: 557 HRKDLDDLVEAALLFYGKKKLL--DNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR 614
           H   L  ++   +  + +   L    T L      D D R     L+FP K A+     R
Sbjct: 146 HGDALRRVIGELVALHERNGTLRRGETDLREVARADTDGRGHLDGLRFPSK-AVVTAEGR 204

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY------NAKK 668
           + ++D+ ++ +     D   +++    G  G  DG+FD A F  P GL        +   
Sbjct: 205 VLVADTANHSVAEFASDAETLLRRFGDGRRGAVDGAFDVARFAEPSGLTLLPTHVADEVG 264

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728
             L VADT NH LR +D     VRT+AG G +  D           L SPWDV +     
Sbjct: 265 YHLLVADTANHLLRGVDLRTGAVRTVAGTGRQWRDGDDSGPALGVDLTSPWDVRWWDAAN 324

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
            V +AMAG H +     V+G    F+G   E  L  +S+    FAQ SG++++ +   ++
Sbjct: 325 GVVVAMAGNHTLSLFDPVEGTISRFAGTTVE-GLRDASAAEAFFAQTSGLAVTGE--RLW 381

Query: 789 VADSESSSIRALNLKTGGS--------RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
           + D+E+S++R +    G +        R   G D      LF FG RDG     L QHPL
Sbjct: 382 LVDAETSALRYVERDGGDAGDAGGFVVRTAVGQD------LFTFGHRDGAADSALFQHPL 435

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           GV    +G I VAD+YN  +++ DP +  V+TL        +D       L+EP+G++  
Sbjct: 436 GVTVLPDGAIGVADTYNGAVRRFDPVTGEVTTL-------LRD-------LAEPSGLV-V 480

Query: 901 QNGNLFIADTNNNIIRYLDLNKEE----PELQTLELKGVQPPT 939
            +G + + ++  + +R L+   E+      +   EL   +PPT
Sbjct: 481 TDGGVLVVESAAHRLRPLERGGEDGLGGEVVDGAELAVRRPPT 523


>gi|300791003|ref|YP_003771294.1| NHL repeat-containing protein [Amycolatopsis mediterranei U32]
 gi|384154546|ref|YP_005537362.1| NHL repeat-containing protein [Amycolatopsis mediterranei S699]
 gi|399542881|ref|YP_006555543.1| NHL repeat-containing protein [Amycolatopsis mediterranei S699]
 gi|299800517|gb|ADJ50892.1| NHL repeat-containing protein [Amycolatopsis mediterranei U32]
 gi|340532700|gb|AEK47905.1| NHL repeat-containing protein [Amycolatopsis mediterranei S699]
 gi|398323651|gb|AFO82598.1| NHL repeat-containing protein [Amycolatopsis mediterranei S699]
          Length = 605

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 173/509 (33%), Positives = 260/509 (51%), Gaps = 39/509 (7%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT        +L+G+VV+LDFWT  CINC+HVL +L  LE ++ D+  T+ GVHS KF
Sbjct: 11  WLNTGGRTITLAELRGRVVLLDFWTSGCINCLHVLDELRPLEAEFADVLVTI-GVHSPKF 69

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E +  +I  AV RY + HPVVND  M LW +  V +WPT  VV P G ++   AGEGH
Sbjct: 70  LHEGERASIEAAVRRYEVHHPVVNDPGMELWSQYAVRAWPTLVVVDPEGYVVHVAAGEGH 129

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
            + L  +++  +  +  K  L     P  +  +  P      L+FP K A+     R+ +
Sbjct: 130 EEALRRVIKDLVTKHEAKGTLRRGGSPY-VPVEEQP----GELRFPSK-AVATAEGRVLV 183

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA---YNAKKNLLY-- 672
           +D+ H+ IV    DG  +++   SG  G +DG FD ATF  P G+A   Y+  + + Y  
Sbjct: 184 ADTGHHAIVEFASDGETVIRRFGSGARGSQDGPFDIATFTEPSGIALLPYDIAERVGYHA 243

Query: 673 -VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
            VADT  H LR +D +   V T+AG G +        K     L SPWDV +      V 
Sbjct: 244 VVADTAGHRLRGLDLITGEVTTVAGTGAQWRSGPDSGKAAEVDLTSPWDVAWWGPAGGVV 303

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           +AMAG H +     V G  R F+G   E   +G       FAQ SG+++  D  ++++ D
Sbjct: 304 VAMAGNHTLSVFDPVGGTIRRFAGTTVEGLRDGDVG-EAFFAQTSGLAVDGD--KLWLVD 360

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
           +E+S++R +    G S  +     +   +LF FG  DG   + LLQHPLG+      +I 
Sbjct: 361 AETSALRWIE-PAGESFTVQTAIGV---DLFSFGHTDGPADQALLQHPLGLAVLPGDKIA 416

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN 911
           +AD+YN  +++ D  + +V+T              +A  L+EP G++   +G L + ++ 
Sbjct: 417 IADTYNGAVRRFDVFTRQVTT--------------IATGLAEPQGLL-LHDGELLVVESA 461

Query: 912 NNIIRYLDLNKEEPELQTLELKGV-QPPT 939
            N  R   L   EP +   +   V +PPT
Sbjct: 462 GN--RLGPLPAAEPTVVAGDAHAVRRPPT 488


>gi|384568064|ref|ZP_10015168.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           glauca K62]
 gi|384523918|gb|EIF01114.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           glauca K62]
          Length = 634

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/515 (32%), Positives = 264/515 (51%), Gaps = 37/515 (7%)

Query: 439 WLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           W NT   PL     L+GK+V+LDFWT  C+NC+HVL +L  LE+++ D+  TV GVHS K
Sbjct: 28  WWNTGGEPLTLA-GLRGKIVLLDFWTSGCVNCLHVLDELRPLEEEFADVLVTV-GVHSPK 85

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F +E   +++  AV R G+ HPVV+D DM+LW++  V +WPT  VV P G +    AGEG
Sbjct: 86  FAHEGGRDSVAAAVGRLGVDHPVVSDPDMSLWQQYAVKAWPTLVVVDPEGYVAHVAAGEG 145

Query: 557 HRKDLDDLVEAALLFYGKKKLLDN---TPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNN 613
           H   L  ++   +  + +K  L      P   +    ++   +   L+FP K A+     
Sbjct: 146 HGDALRRVIGDLVALHEEKGTLRRGAFDPSEAARAAADNRGGWLDGLRFPSK-AVVTAEG 204

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY------NAK 667
           R+ ++D+ ++ I     D   +++    G  G  DG+FD A F  P GL        +  
Sbjct: 205 RVLVADTANHSIAEFASDVETLLRRFGDGRRGSVDGAFDVARFAEPSGLTLLPTHVADRV 264

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
              L +ADT NH LR +D     VRT+AG G +  D           L SPWDV +  + 
Sbjct: 265 GYHLLIADTANHLLRGVDLRTGAVRTVAGTGRQWRDGDDSGPALDVDLTSPWDVRWWDVA 324

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
             V +AMAG H +     ++G    F+G   E  L  + +    FAQ SG++++ D   +
Sbjct: 325 GGVVVAMAGNHTLGLFDPIEGTISRFAGTTVE-GLRDAPAAEAFFAQTSGLAVAGD--RL 381

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           ++ D+E+S++R +     G   + G       +LF FG RDG     L QHPLG+    +
Sbjct: 382 WLVDAETSALRYVERDDTGDGFVVG--TAVGHDLFTFGHRDGAADSALFQHPLGITVLPD 439

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
           G I VAD+YN  +++ DP +  V+TL        +D       L+EP+ ++   +G +F+
Sbjct: 440 GAIGVADTYNGAVRRFDPDTGEVTTL-------LRD-------LAEPSDLVVTDSG-VFV 484

Query: 908 ADTNNNIIRYLDLNKEEPELQTL---ELKGVQPPT 939
            ++  + +R LD  +++ E + +   EL   +PPT
Sbjct: 485 VESAAHRLRPLDSGEDDSEGEVVDGAELAVRRPPT 519


>gi|283458725|ref|YP_003363360.1| thiol-disulfide isomerase [Rothia mucilaginosa DY-18]
 gi|283134775|dbj|BAI65540.1| thiol-disulfide isomerase [Rothia mucilaginosa DY-18]
          Length = 656

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 172/474 (36%), Positives = 245/474 (51%), Gaps = 53/474 (11%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       +DL+GK+V+LDFWT CCINC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 21  WLNTGDKNLTLQDLRGKIVILDFWTLCCINCLHVLDELRPLEEEFSDVLVTV-GVHSPKF 79

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+  AV RY I+HPV++D ++  W+     +WPT  VV P G ++A L+GEGH
Sbjct: 80  EHEADPVALAAAVDRYHITHPVLDDPELTTWQAYTARAWPTLVVVDPEGYIVAHLSGEGH 139

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPR-LFTSPLKFPGKLAID------- 609
            + L  LV   +  +  K  L     P        PR        FPGK AI+       
Sbjct: 140 VQGLTSLVRELVAEHEAKGTLHRGDGPYV------PRPKAAGTYAFPGK-AIELPAEFGP 192

Query: 610 --ILNNR---LFISDSNHNRIVVTDLDGNFIVQIGSSGEE-------GLRDGSFDDATFN 657
             +  NR     ++DS  +RI+    D N ++     G++       G  DG+  +A FN
Sbjct: 193 ANLFGNRERTYLVADSARHRILQVAADLNTVINTYGGGDDPVNHPVKGHVDGTGTEARFN 252

Query: 658 RPQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKG---------- 701
            P GLA    N ++ L Y   VADT NH LR ++     VRTLAGNG +           
Sbjct: 253 EPAGLALVPENLREQLGYDVLVADTVNHRLRSLNLTTGEVRTLAGNGVQRVIDGDNAITG 312

Query: 702 --SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759
             +    G   T   L+SPWD  Y     +  IAMAG HQ++ +  ++G    F+G G E
Sbjct: 313 DPNHIPAGVPATEIALSSPWDAVYSREAGQFIIAMAGTHQLFGYEPINGTVSIFAGSGVE 372

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
              +G ++ +  FAQPSGI  + D   ++VA SE+S +R +     G ++ +        
Sbjct: 373 GLADGPAA-DAWFAQPSGIIEARD-GSLWVACSETSGLRHVTFTEDGVQVTSA----VGK 426

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            LF FG  DG      +QHPLG+    +G I VAD+YN  I++ DPA+  + TL
Sbjct: 427 GLFDFGFVDGDSDTARMQHPLGLTELPDGSIAVADTYNGAIRRWDPATGTLGTL 480



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 16/179 (8%)

Query: 772 FAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDP---IFPDNLF 822
           F +P+G++L P+ +      ++ VAD+ +  +R+LNL TG  R LAG      I  DN  
Sbjct: 251 FNEPAGLALVPENLREQLGYDVLVADTVNHRLRSLNLTTGEVRTLAGNGVQRVIDGDNAI 310

Query: 823 KFGDRDGM-----GSEVLLQHPL-GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI 876
             GD + +      +E+ L  P   VY  + GQ  +A +  H++   +P +  VS  AG 
Sbjct: 311 T-GDPNHIPAGVPATEIALSSPWDAVYSREAGQFIIAMAGTHQLFGYEPINGTVSIFAGS 369

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           G  G  DG A  A  ++P+GIIEA++G+L++A +  + +R++   ++  ++ +   KG+
Sbjct: 370 GVEGLADGPAADAWFAQPSGIIEARDGSLWVACSETSGLRHVTFTEDGVQVTSAVGKGL 428


>gi|27552887|gb|AAH41104.1| Nhlrc2 protein, partial [Mus musculus]
          Length = 522

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 172/495 (34%), Positives = 262/495 (52%), Gaps = 43/495 (8%)

Query: 598  SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
            SPL FPGK+A+D    RL ++D+ H+RI+V   +G     IG     G +DG F +++FN
Sbjct: 18   SPLLFPGKVAVDHATGRLVVADTGHHRILVIQKNGRIQSSIGGP-NPGRKDGMFSESSFN 76

Query: 658  RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
             PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D +GGE+G  Q ++S
Sbjct: 77   SPQGVAI--ADNVIYVADTENHLIRKIDLEAEKVTTVAGVGIQGTDTEGGEEGDKQPISS 134

Query: 718  PWDVCYKPI------NEKVYIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYER 760
            PWDV           N+ ++IAMAG HQIW           +     G    F+G G E 
Sbjct: 135  PWDVALGTSGSEVQRNDILWIAMAGTHQIWALLLDSGTLPKKSDLKKGTCIRFAGSGNEE 194

Query: 761  NLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGG--DPI 816
            N N +      FAQPSG++L+ +  +  ++VADSESS++R ++L+ G  + L GG  DP+
Sbjct: 195  NRNNAYPHKAGFAQPSGLALASEEPWSCLFVADSESSTVRTVSLRDGAVKHLVGGERDPM 254

Query: 817  FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASNRVSTLAG 875
               NLF FGD DG G    LQHPLGV   +  Q+ YVADSYNHKIK +DP +   +TLAG
Sbjct: 255  ---NLFAFGDVDGAGINAKLQHPLGVAWDEERQVLYVADSYNHKIKVVDPKTKGCTTLAG 311

Query: 876  IGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPEL------Q 928
             G A     +   +  +EP G+   ++G  L++ADTNN+ I+ +DL      +       
Sbjct: 312  TGDASDASSSFAESAFNEPGGLCIGESGRLLYVADTNNHQIKVMDLEARTVSVLPVCKSD 371

Query: 929  TLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEAR 988
            +  + G  P   +   PK  +  +      + V  G + +  + LK+ LP     ++ A 
Sbjct: 372  SAVVDGSFPREKQKTVPKVPKSAAHIGLPPVTVHPGQALQ--LRLKLQLPPGAKLTEGAP 429

Query: 989  SKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-STGRISCKVYYCKED- 1042
            S + ++ E    ++ +        N+S + +  L       S+ +   +   +YYC  D 
Sbjct: 430  SCWFLEAEGNEWLLQEQTPSGDIENISNQPAISLQIPTHCLSLEAVVSVVVFLYYCSADS 489

Query: 1043 EVCLYKPLLFEVPFQ 1057
              C+ K ++F  P Q
Sbjct: 490  SACMMKGVVFRQPLQ 504



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 53/113 (46%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D D     + L+ P  +A D     L+++DS +++I V D        +  +
Sbjct: 253 PMNLFAFGDVDGAGINAKLQHPLGVAWDEERQVLYVADSYNHKIKVVDPKTKGCTTLAGT 312

Query: 642 GEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           G+      SF ++ FN P GL       LLYVADT NH ++ +D    TV  L
Sbjct: 313 GDASDASSSFAESAFNEPGGLCIGESGRLLYVADTNNHQIKVMDLEARTVSVL 365


>gi|354615998|ref|ZP_09033698.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Saccharomonospora paurometabolica YIM 90007]
 gi|353219649|gb|EHB84187.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Saccharomonospora paurometabolica YIM 90007]
          Length = 727

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 190/556 (34%), Positives = 274/556 (49%), Gaps = 84/556 (15%)

Query: 414 FVNYISDVENRKTTPI-VPEFPAKLDWLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMH 470
           F   +S  +NR   P+  PE    + W NT   PL     L+G+VV+LDFWT  C+NC+H
Sbjct: 36  FTGGVSAAKNRA--PVRAPELTGDV-WFNTGDRPLTLSA-LRGRVVLLDFWTSGCVNCLH 91

Query: 471 VLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530
           VL +L  LE+++ D+    +GVHS KF  E + E++  AV RYG+ HPVV+D DM LW+E
Sbjct: 92  VLDELRPLEREFADV-LVTIGVHSPKFAREGEAESVAAAVARYGVDHPVVSDPDMRLWQE 150

Query: 531 LGVNSWPTFAVVGPNGKLLAQLAGEGH----RKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
             V +WPT  VV P G +    AGEGH    R  + DLV A     G  +  D+ PL  +
Sbjct: 151 YTVKAWPTLVVVDPEGYVAHVAAGEGHADALRTVIRDLV-AGHEAAGTLRRGDD-PLAEA 208

Query: 587 L----------------EKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDL 630
           L                E+    R    PL+FP K A+     R+ ++D+ H+ +V    
Sbjct: 209 LDRAGPAGRTDQEEGRDEQGGRDRATGVPLRFPSK-AVATAEGRVLVADTAHHSVVEFAS 267

Query: 631 DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL-------AYNAKKNLLYVADTENHALRE 683
           D   +V+    GE G  DG+FD ATF  P GL       A     +LL VADT NH LR 
Sbjct: 268 DAETVVRRFGDGERGAADGAFDVATFAEPAGLTLLPPEVAERVGYHLL-VADTGNHLLRG 326

Query: 684 IDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH 743
           ID    +VRT+AG G +  D       T   L SPWDV +      V +AMAG H +   
Sbjct: 327 IDLRTGSVRTVAGTGAQWRDGADSGPATGSALTSPWDVRWWEPAGGVVVAMAGNHTLSLF 386

Query: 744 STVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
             V G  R F+G   E  L   ++    FAQ SG++++ +   +++ D+E+S++R ++  
Sbjct: 387 DPVRGEIRRFAGTTVE-GLRDGAAAEAFFAQTSGLAVAGE--RLWLVDAETSALRRVDPT 443

Query: 804 TGGS---------------------RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
            G                       R   G D      LF FG RDG  ++ LLQHP G+
Sbjct: 444 DGPDADGDGAADADADGDGRDRFVVRTEVGVD------LFTFGHRDGDAAQALLQHPTGL 497

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
               +G I VAD+YN  +++ DP + +V+TL        +D       L+EP  ++    
Sbjct: 498 SVLPDGGIAVADTYNGAVRRFDPDTGQVTTL-------MRD-------LAEPTDVLVTDT 543

Query: 903 GNLFIADTNNNIIRYL 918
           G +F+ ++  + +R L
Sbjct: 544 G-VFVVESAAHRLRAL 558



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 113/302 (37%), Gaps = 86/302 (28%)

Query: 700 KGSDYQGG-EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH-STVDGVTRAFSGDG 757
           +G D QGG ++ T   L  P          +V +A    H + E  S  + V R F GDG
Sbjct: 222 EGRDEQGGRDRATGVPLRFP-SKAVATAEGRVLVADTAHHSVVEFASDAETVVRRF-GDG 279

Query: 758 YERNLNGSSSLNTSFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLA 811
                +G+  + T FA+P+G++L P  +       + VAD+ +  +R ++L+TG  R +A
Sbjct: 280 ERGAADGAFDVAT-FAEPAGLTLLPPEVAERVGYHLLVADTGNHLLRGIDLRTGSVRTVA 338

Query: 812 GGDPIFPD-------------------------------------NLF--------KF-- 824
           G    + D                                     +LF        +F  
Sbjct: 339 GTGAQWRDGADSGPATGSALTSPWDVRWWEPAGGVVVAMAGNHTLSLFDPVRGEIRRFAG 398

Query: 825 ----GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR----------- 869
               G RDG  +E       G+  A   ++++ D+    ++++DP               
Sbjct: 399 TTVEGLRDGAAAEAFFAQTSGLAVAGE-RLWLVDAETSALRRVDPTDGPDADGDGAADAD 457

Query: 870 ----------VSTLAGIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRY 917
                     V T  G+     G +DG A  A L  P G+    +G + +ADT N  +R 
Sbjct: 458 ADGDGRDRFVVRTEVGVDLFTFGHRDGDAAQALLQHPTGLSVLPDGGIAVADTYNGAVRR 517

Query: 918 LD 919
            D
Sbjct: 518 FD 519



 Score = 48.9 bits (115), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG 884
           G RD   + V L+ P        G++ VAD+ +H + +    +  V    G G+ G  DG
Sbjct: 228 GGRD-RATGVPLRFPSKAVATAEGRVLVADTAHHSVVEFASDAETVVRRFGDGERGAADG 286

Query: 885 AALAAQLSEPAG-------IIEAQNGNLFIADTNNNIIRYLDLN 921
           A   A  +EPAG       + E    +L +ADT N+++R +DL 
Sbjct: 287 AFDVATFAEPAGLTLLPPEVAERVGYHLLVADTGNHLLRGIDLR 330


>gi|239918387|ref|YP_002957945.1| thiol-disulfide isomerase-like thioredoxin [Micrococcus luteus NCTC
           2665]
 gi|239839594|gb|ACS31391.1| thiol-disulfide isomerase-like thioredoxin [Micrococcus luteus NCTC
           2665]
          Length = 699

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 184/538 (34%), Positives = 270/538 (50%), Gaps = 81/538 (15%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   Q    DL+GKVV+LDFWT+CCINC+HVL +L  LE+++ D+    VGVHS KF
Sbjct: 36  WLNTGGEQVTLEDLRGKVVLLDFWTFCCINCLHVLDELRPLEEEFADV-LVTVGVHSPKF 94

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D +A+  AV RY I HPV++D ++  W+     +WPT  VV P G + A L+GEGH
Sbjct: 95  EHEADPDALAAAVERYAIEHPVLDDPELTTWQAYSARAWPTLVVVDPEGYIAAHLSGEGH 154

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGK-LAIDILN 612
              L  LV         ++L+       +L + + P +  +P    L FPGK +++    
Sbjct: 155 VAGLYGLV---------RELVAEHEAKGTLHRGSGPYVPPAPVARDLSFPGKAVSLGGRG 205

Query: 613 NR---LFISDSNHNRI--VVTDLD----------------GNFIVQIGSSGEEGLRDGSF 651
           +R     +SD+ H+R+  V  DL                 G   +   + GE+G  DG  
Sbjct: 206 SRPGSFLVSDTGHHRLLEVAEDLTTVLRAFGGGDPATADAGQAELAFPTPGEKGHADGGP 265

Query: 652 DDATFNRPQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTK----- 700
           D+A F+ PQGLA    +  + + Y   VAD+ NH LR +   +  V TLAGNG +     
Sbjct: 266 DEALFHEPQGLALLPEDVAERVGYDVVVADSVNHRLRGLRLSDGYVSTLAGNGVQKLIDS 325

Query: 701 -------GSDYQG----------GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH 743
                    D +G          GE  T+  L+SPWDV + P   +V IAMAG HQ+++ 
Sbjct: 326 ERAKEAAAVDDEGDVAVDLADLPGEP-TAISLSSPWDVVWHPALGRVVIAMAGTHQLFDF 384

Query: 744 STVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
             V G     +G   E  L+G +     FAQPSG+S+  D   ++VADSE+S++R +   
Sbjct: 385 DPVTGALAVHAGTALEGLLDGDAG-RAWFAQPSGLSVGADGA-LWVADSETSAVRWVRTG 442

Query: 804 TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
             G R +          LF FG  DG      LQH LGV    +G + +AD+YN  I++ 
Sbjct: 443 EDGRREVG---TAVGAGLFDFGHVDGEADRARLQHALGVTALPDGSVLIADTYNGAIRRY 499

Query: 864 DPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            PA    +     G+A     + +A  L EP+ ++   +     AD N+  I  ++ N
Sbjct: 500 APAGEDAA-----GRAVPATVSTVARGLLEPSDVLVEHD-----ADGNDTAIVVVESN 547


>gi|325965074|ref|YP_004242980.1| thiol-disulfide isomerase-like thioredoxin [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323471161|gb|ADX74846.1| thiol-disulfide isomerase-like thioredoxin [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 674

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 185/582 (31%), Positives = 278/582 (47%), Gaps = 86/582 (14%)

Query: 438 DWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           +WLNT       + L+GK+V+LDFWT+CCINC+HVL +L  LE++Y D+    VGVHS K
Sbjct: 20  NWLNTGGKSLDLEALRGKIVLLDFWTFCCINCLHVLDELRPLEEQYSDV-LVTVGVHSPK 78

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F++E D  A+  AV RY I HPV++D ++  W+     +WPT  V+ P G ++A L+GEG
Sbjct: 79  FEHEADPVALAAAVERYEIHHPVLDDPELETWKAYTARAWPTLVVIDPEGYIVAHLSGEG 138

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNR-- 614
           H   L  L+   +  +  K  L     P        P   +  L+FPGK A+ +   R  
Sbjct: 139 HADGLAVLIPELIAQHEAKGTLHRGSGPYVA-----PEPTSGTLRFPGK-ALFLPPGRGS 192

Query: 615 -------------------------LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDG 649
                                      ++D+ H+R+V    D + ++    SG  G  DG
Sbjct: 193 ASEGMSDGGTAAGAAAAGSAASKGSWLVTDTGHHRLVELGTDFHTVLGTFGSGTRGHADG 252

Query: 650 SFDD----ATFNRPQGLAY-----NAKKNL-LYVADTENHALREIDFVNDTVRTLAGNGT 699
                   A FN PQGL        AK    + +AD+ NH LR +   +    TLAG+G 
Sbjct: 253 PAAGDTAVAQFNEPQGLVLLPEDVAAKAGYDVVIADSVNHRLRGLSLADGKASTLAGSGV 312

Query: 700 K-------------GSDYQGGEKGT--SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHS 744
           +              + + G   G      L+SPWDV +      V IAMAG HQI+   
Sbjct: 313 QRLLEAGPARVDEDAAGFSGQLVGHPLDVALSSPWDVVWSRKLNAVVIAMAGTHQIFSFD 372

Query: 745 TVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
            + G     +G+G E  L+G+      FAQPSG++   D   I+VADSE+S++R L +  
Sbjct: 373 PLTGSVAIVAGNGLEGLLDGAPH-EAWFAQPSGLAEDAD-GNIWVADSETSALRKLVIDD 430

Query: 805 GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLD 864
            G   +   +      LF FG RDG  +E  LQHPLGV    +G + +AD+YN  +++ D
Sbjct: 431 DGGVAV---ESAIGKGLFDFGFRDGPAAEARLQHPLGVTVLPDGSVAIADTYNGAVRRYD 487

Query: 865 PASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN------LFIADTNNNIIRYL 918
           PAS  VST              LA  L EP+ +I     +      L + + N + + ++
Sbjct: 488 PASGTVST--------------LARGLLEPSDVIVDHTHSAGSEPLLVVVEANKHQVVFV 533

Query: 919 DLNKEEPELQTLELKGVQPPTPKSRSPKRLRRR-SSPDAQTI 959
            + KE  ++    ++  +P +P +  P  L  R ++P  Q +
Sbjct: 534 PIPKEAQQVDEGAVQTHRPKSPVAPGPLELTVRFTAPTGQKL 575


>gi|380300595|ref|ZP_09850288.1| NHL repeat protein [Brachybacterium squillarum M-6-3]
          Length = 644

 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 163/447 (36%), Positives = 235/447 (52%), Gaps = 37/447 (8%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT  +     DL+GK+V+LDFWT+CC+NC+HVL +L  LE+K+ +    VVGVHS KF
Sbjct: 25  WLNTGGVDLDLEDLRGKIVLLDFWTFCCVNCLHVLDELRPLEEKWAEE-LVVVGVHSPKF 83

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           + EKD +A+   + RY ++HPV++D ++  W E G  +WPT  V+   G++   L+GEGH
Sbjct: 84  EFEKDPDALAANIERYEVTHPVLDDPELLTWSEYGARAWPTLMVLDTQGRIAGNLSGEGH 143

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
            ++LD L+   +        L   P P  + +          L+FP K+ I + + R+ +
Sbjct: 144 AENLDALIGRLVAEGEADGSLRRGPAPTVIAEK-----VPQTLRFPSKVTI-LDDWRIVV 197

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG-------LAYNAKKNL 670
           SD+  +R+VV D DG  + +    G  GL DG      F  P G       +A     +L
Sbjct: 198 SDAGQHRLVVFDPDGTTVDEEIGDGRRGLLDGESAGVRFAEPNGVLALPSDVAAEVGYDL 257

Query: 671 LYVADTENHALREIDFVND---------TVRTLAGNGTKGSDYQGGEKGT----SQLLNS 717
           L VADT NH LR +    D          V T+AG+G +        +G     S  L++
Sbjct: 258 L-VADTANHVLRGVKVGQDRFLRSRTATEVWTVAGSGAQWMQGDALPRGEGDPRSYALST 316

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           PWD+ +     +V I MAG HQ+W    V G     +G   E  ++G  ++ + +AQPSG
Sbjct: 317 PWDLGWSHALNRVVITMAGIHQLWTFDPVTGSLMVLAGTTQEGLVDG-PAVTSWWAQPSG 375

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           I   PD   + VADSESS+IR L+ +T     L G        LF FG  DG      LQ
Sbjct: 376 IDELPDG-RLVVADSESSAIRVLDPQTMEVSTLVG------QGLFDFGHVDGPAEVARLQ 428

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLD 864
           HPLGV    +G+I VAD+YN  I+ +D
Sbjct: 429 HPLGVTVLPDGRIAVADTYNGAIRIVD 455



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 41/310 (13%)

Query: 729  KVYIAMAGQHQIW----EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
            ++ ++ AGQH++     + +TVD       GDG    L+G S+    FA+P+G+   P  
Sbjct: 194  RIVVSDAGQHRLVVFDPDGTTVD----EEIGDGRRGLLDGESA-GVRFAEPNGVLALPSD 248

Query: 785  M------EIYVADSESSSIRALNLKTGGSRLL------------AGGDPIFPDNLFKFGD 826
            +      ++ VAD+ +  +R   +K G  R L              G      +    G+
Sbjct: 249  VAAEVGYDLLVADTANHVLR--GVKVGQDRFLRSRTATEVWTVAGSGAQWMQGDALPRGE 306

Query: 827  RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAA 886
             D     +     LG   A N ++ +  +  H++   DP +  +  LAG  + G  DG A
Sbjct: 307  GDPRSYALSTPWDLGWSHALN-RVVITMAGIHQLWTFDPVTGSLMVLAGTTQEGLVDGPA 365

Query: 887  LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPK 946
            + +  ++P+GI E  +G L +AD+ ++ IR LD   +  E+ TL  +G+         P 
Sbjct: 366  VTSWWAQPSGIDELPDGRLVVADSESSAIRVLD--PQTMEVSTLVGQGLF-DFGHVDGPA 422

Query: 947  RLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDV--------EPE 998
             + R   P   T++ DG ++        I + +E+      R+  +  V        EP 
Sbjct: 423  EVARLQHPLGVTVLPDGRIAVADTYNGAIRIVDEHAEENPIRTGDAATVVTVATDLDEPS 482

Query: 999  NAVIIDPLDG 1008
             A++  P+DG
Sbjct: 483  AALVGPPVDG 492



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P  V    + +I V+D+  H++   DP    V    G G+ G  DG +   + +EP 
Sbjct: 181 LRFPSKVTILDDWRIVVSDAGQHRLVVFDPDGTTVDEEIGDGRRGLLDGESAGVRFAEPN 240

Query: 896 GI------IEAQNG-NLFIADTNNNIIRYLDLNKE 923
           G+      + A+ G +L +ADT N+++R + + ++
Sbjct: 241 GVLALPSDVAAEVGYDLLVADTANHVLRGVKVGQD 275


>gi|255327417|ref|ZP_05368491.1| NHL repeat containing protein [Rothia mucilaginosa ATCC 25296]
 gi|255295697|gb|EET75040.1| NHL repeat containing protein [Rothia mucilaginosa ATCC 25296]
          Length = 656

 Score =  259 bits (662), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 173/474 (36%), Positives = 243/474 (51%), Gaps = 53/474 (11%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       +DL+GK+V+LDFWT CCINC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 21  WLNTGDKNLTLQDLRGKIVILDFWTLCCINCLHVLDELRPLEEEFSDVLVTV-GVHSPKF 79

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+  AV RY I+HPV++D ++  W+     +WPT  VV P G ++A L+GEGH
Sbjct: 80  EHEADPVALAAAVDRYHITHPVLDDPELTTWQAYTARAWPTLVVVDPEGYIVAHLSGEGH 139

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPR-LFTSPLKFPGKLAID------- 609
            + L  LV   +  +  K  L     P        PR        FPGK AI+       
Sbjct: 140 VQGLTSLVRELVAEHEAKGTLHRGDGPYV------PRPKAAGTYAFPGK-AIELPAEFGP 192

Query: 610 --ILNNR---LFISDSNHNRIVVTDLDGNFIVQIGSSGEE-------GLRDGSFDDATFN 657
             +  NR     ++DS  +RI+    D N ++     G++       G  DG+  +A FN
Sbjct: 193 ANLFGNRERTYLVADSARHRILQVAADLNTVINTYGGGDDPVNHPVKGHVDGTGTEARFN 252

Query: 658 RPQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKG---------- 701
            P GLA    N ++ L Y   VADT NH LR ++     VRTLAGNG +           
Sbjct: 253 EPAGLALVPENLREQLGYDVLVADTVNHRLRSLNLRTGEVRTLAGNGVQRVIDGDNAITG 312

Query: 702 --SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759
             +    G   T   L+SPWD  Y     +  IAMAG HQ++ +  V G    F+G G E
Sbjct: 313 DPNHIPAGVPATDIALSSPWDAVYSREAGQFIIAMAGTHQLFGYEPVTGTVSIFAGSGVE 372

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
              +G +  +  FAQPSGI  + D   ++VA SE+S +R +     G ++ +        
Sbjct: 373 GLADGPAD-DAWFAQPSGIIEARD-GSLWVACSETSGLRHITFTEDGVQVTSA----VGK 426

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            LF FG  DG      +QHPLG+    +G I VAD+YN  I++ DPA+  + TL
Sbjct: 427 GLFDFGFVDGDSDTARMQHPLGLTELPDGSIAVADTYNGAIRRWDPATGTLGTL 480



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 98/179 (54%), Gaps = 16/179 (8%)

Query: 772 FAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDP---IFPDNLF 822
           F +P+G++L P+ +      ++ VAD+ +  +R+LNL+TG  R LAG      I  DN  
Sbjct: 251 FNEPAGLALVPENLREQLGYDVLVADTVNHRLRSLNLRTGEVRTLAGNGVQRVIDGDNAI 310

Query: 823 KFGDRDGM-----GSEVLLQHPL-GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI 876
             GD + +      +++ L  P   VY  + GQ  +A +  H++   +P +  VS  AG 
Sbjct: 311 T-GDPNHIPAGVPATDIALSSPWDAVYSREAGQFIIAMAGTHQLFGYEPVTGTVSIFAGS 369

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           G  G  DG A  A  ++P+GIIEA++G+L++A +  + +R++   ++  ++ +   KG+
Sbjct: 370 GVEGLADGPADDAWFAQPSGIIEARDGSLWVACSETSGLRHITFTEDGVQVTSAVGKGL 428


>gi|452951305|gb|EME56755.1| NHL repeat-containing protein [Amycolatopsis decaplanina DSM 44594]
          Length = 602

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 40/494 (8%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   + +   L+G+VV+LDFWT  CINC+HVL +L  LE ++ D+  T+ GVHS KF
Sbjct: 11  WLNTGGERIKLAGLRGRVVLLDFWTSGCINCLHVLDELRPLEAEFADVLVTI-GVHSPKF 69

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E +  AI  AV RY + HPV+ND  M  W +  V +WPT  VV P G ++   AGEGH
Sbjct: 70  LHEGEAAAIEAAVRRYEVHHPVLNDPKMTTWSQYAVKAWPTLVVVDPEGYVVHVAAGEGH 129

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
            + L  ++   ++ +  K  L     P    ++       + L+FP K A+     R+ +
Sbjct: 130 AESLRRVIADLVVTHDAKGTLRRGGSPYVPAEEQ-----RTELRFPSK-AVTTAEGRILV 183

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG---LAYNAKKNLLY-- 672
           +D+ ++ IV    DG  I++   SGE G +DG FD A+F  P G   L Y   +   Y  
Sbjct: 184 ADTGNHSIVEFASDGETIIRRFGSGERGAQDGPFDLASFTEPSGITLLPYEVAERAGYHA 243

Query: 673 -VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
            VADT  H LR ID +   V T+AG G +  D     K     L SPWDV +      V 
Sbjct: 244 VVADTAGHRLRGIDLITGEVSTVAGTGRQWRDGVDTGKALDIDLTSPWDVAWWGPAGGVV 303

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           +AMAG H +     V G  R F+G   E  L         FAQ SG  L+PD  ++++AD
Sbjct: 304 VAMAGNHTLSVFEPVSGTIRRFAGTTVE-GLRDGDVHEAFFAQTSG--LTPDGQKLWLAD 360

Query: 792 SESSSIRALNL--KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           +E+S++R +    +T       G D      LF FG  DG   + LLQHPLG+       
Sbjct: 361 AETSALRWIQPEGETFTVHTAVGVD------LFSFGHVDGPADKALLQHPLGLVVLPGDT 414

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           + +AD+YN  I++ DP + +V+T              LA  L+EP+G++   +G L + +
Sbjct: 415 VAIADTYNGAIRRYDPLTRQVTT--------------LATGLAEPSGLL-MHDGELLVVE 459

Query: 910 TNNNIIRYLDLNKE 923
           +  + I  + L ++
Sbjct: 460 SAGSRIGPVPLGEQ 473


>gi|422325157|ref|ZP_16406193.1| hypothetical protein HMPREF0737_01303 [Rothia mucilaginosa M508]
 gi|353343435|gb|EHB87752.1| hypothetical protein HMPREF0737_01303 [Rothia mucilaginosa M508]
          Length = 656

 Score =  256 bits (654), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 170/473 (35%), Positives = 241/473 (50%), Gaps = 51/473 (10%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       +DL+GK+V+LDFWT CCINC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 21  WLNTGDKNLTLQDLRGKIVILDFWTLCCINCLHVLDELRPLEEEFSDVLVTV-GVHSPKF 79

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+  AV RY I+HPV++D ++  W+     +WPT  VV P G ++A L+GEGH
Sbjct: 80  EHEADPVALAAAVDRYHITHPVLDDPELTTWQAYTARAWPTLVVVDPEGYIVAHLSGEGH 139

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPR-LFTSPLKFPGKL--------AI 608
            + L  LV   +  +  K  L     P        PR        FPGK           
Sbjct: 140 VQGLTSLVRELVAEHEAKGTLHRGDGPYV------PRPKAAGTYAFPGKAIELPAEFGPA 193

Query: 609 DILNNR---LFISDSNHNRIVVTDLDGNFIVQIGSSGEE-------GLRDGSFDDATFNR 658
           ++  NR     ++DS  +RI+    D N ++     G++       G  DG+  +A FN 
Sbjct: 194 NLFGNRERTYLVADSARHRILQVAADLNTVINTYGGGDDPINHPVKGHVDGTGTEARFNE 253

Query: 659 PQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKG----------- 701
           P GLA    N ++ L Y   VADT NH LR ++     V TLAGNG +            
Sbjct: 254 PAGLALVPENLREQLGYDVLVADTVNHRLRSLNLRTGEVCTLAGNGVQRVIDGDNAVTGD 313

Query: 702 -SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER 760
            +    G   T   L+SPWD  Y     +  IAMAG HQ++ +  V G    F+G G E 
Sbjct: 314 PNHIPAGVPATDIALSSPWDAVYSREAGQFIIAMAGTHQLFGYEPVTGTVSIFAGSGVEG 373

Query: 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN 820
             +G ++ +  FAQPSGI  + D   ++VA SE+S +R +     G ++ +         
Sbjct: 374 LADGPAA-DAWFAQPSGIIEARD-GSLWVACSETSGLRHITFTDNGVQVTSA----VGKG 427

Query: 821 LFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
           LF FG  DG      +QHPLG+    +G I VAD+YN  I++ DPA+  + TL
Sbjct: 428 LFDFGFVDGDSDTARMQHPLGLTELPDGSIAVADTYNGAIRRWDPATGTLGTL 480



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 16/179 (8%)

Query: 772 FAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDP---IFPDNLF 822
           F +P+G++L P+ +      ++ VAD+ +  +R+LNL+TG    LAG      I  DN  
Sbjct: 251 FNEPAGLALVPENLREQLGYDVLVADTVNHRLRSLNLRTGEVCTLAGNGVQRVIDGDNAV 310

Query: 823 KFGDRDGM-----GSEVLLQHPL-GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI 876
             GD + +      +++ L  P   VY  + GQ  +A +  H++   +P +  VS  AG 
Sbjct: 311 T-GDPNHIPAGVPATDIALSSPWDAVYSREAGQFIIAMAGTHQLFGYEPVTGTVSIFAGS 369

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           G  G  DG A  A  ++P+GIIEA++G+L++A +  + +R++       ++ +   KG+
Sbjct: 370 GVEGLADGPAADAWFAQPSGIIEARDGSLWVACSETSGLRHITFTDNGVQVTSAVGKGL 428


>gi|451341293|ref|ZP_21911747.1| NHL repeat containing protein [Amycolatopsis azurea DSM 43854]
 gi|449415822|gb|EMD21660.1| NHL repeat containing protein [Amycolatopsis azurea DSM 43854]
          Length = 602

 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 174/500 (34%), Positives = 253/500 (50%), Gaps = 37/500 (7%)

Query: 431 PEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           PE    + WLNT   +     L+G+VV+LDFWT  C+NC+HVL +L  LE ++ D+  TV
Sbjct: 4   PELAGDV-WLNTGGERLTLAGLRGRVVLLDFWTSGCVNCLHVLDELRPLEAEFADVLVTV 62

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
            GVHS KF +E +  AI  AV RY + HPV+ND  M  W +  V +WPT  VV P G ++
Sbjct: 63  -GVHSPKFLHEGEAAAIEAAVRRYEVHHPVLNDPKMATWSQYAVKAWPTLVVVDPEGYVV 121

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
              AGEGH + L  ++   +  +  K  L     P    ++       + L+FP K A+ 
Sbjct: 122 HVAAGEGHAEALRRVIADLVATHEAKGTLRRGGSPYVPAEEQ-----RAELRFPSK-AVT 175

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG---LAYNA 666
               R+ ++D+ ++ IV    DG  I++   SG  G +DG FD A+F  P G   L Y  
Sbjct: 176 TAEGRILVADTGNHSIVEFASDGETIIRRFGSGSRGAQDGPFDLASFTEPSGITLLPYEV 235

Query: 667 KKNLLY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
            +   Y   VADT  H LR ID +   V T+AG G +  D     K     L SPWDV +
Sbjct: 236 AERAGYHAVVADTAGHRLRGIDLITGEVSTVAGTGRQWRDGVDTGKALDIDLTSPWDVAW 295

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
                 V +AMAG H +     V G  R F+G   E  L         FAQ SG  L+PD
Sbjct: 296 WGPAGGVVVAMAGNHTLSVFEPVSGTIRRFAGTTVE-GLRDGDVHEAFFAQTSG--LTPD 352

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              +++AD+E+S++R +  + G S  +     +   +LF FG  DG   + LLQHPLG+ 
Sbjct: 353 GRRLWLADAETSALRWIQPE-GESFTVHTAVGV---DLFSFGHVDGPADQALLQHPLGLA 408

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
                 I +AD+YN  +++ DP + RV+T              LA  L+EP G++   +G
Sbjct: 409 ALPGETIAIADTYNGAVRRYDPLTRRVTT--------------LATGLAEPQGLL-VHDG 453

Query: 904 NLFIADTNNNIIRYLDLNKE 923
            L + ++  N I  + L ++
Sbjct: 454 ELLVVESAGNRIGPVPLGEQ 473


>gi|281415417|ref|ZP_06247159.1| thiol-disulfide isomerase-like thioredoxin [Micrococcus luteus NCTC
           2665]
          Length = 699

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 182/538 (33%), Positives = 268/538 (49%), Gaps = 81/538 (15%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT   Q    DL+GKVV+LDFWT+CCI  +HVL +L  LE+++ D+    VGVHS KF
Sbjct: 36  WLNTGGEQVTLEDLRGKVVLLDFWTFCCIKSLHVLDELRPLEEEFADV-LVTVGVHSPKF 94

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D +A+  AV RY I HPV++D ++  W+     +WPT  VV P G + A L+GEGH
Sbjct: 95  EHEADPDALAAAVERYAIEHPVLDDPELTTWQAYSARAWPTLVVVDPEGYIAAHLSGEGH 154

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGK-LAIDILN 612
              L  LV         ++L+       +L + + P +  +P    L FPGK +++    
Sbjct: 155 VAGLYGLV---------RELVAEHEAKGTLHRGSGPYVPPAPVARDLSFPGKAVSLGGRG 205

Query: 613 NR---LFISDSNHNRI--VVTDLD----------------GNFIVQIGSSGEEGLRDGSF 651
           +R     +SD+ H+R+  V  DL                 G   +   + GE+G  DG  
Sbjct: 206 SRPGSFLVSDTGHHRLLEVAEDLTTVLRAFGGGDPATADAGQAELAFPTPGEKGHADGGP 265

Query: 652 DDATFNRPQGLAY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTK----- 700
           D+A F+ PQGLA    +  + + Y   VAD+ NH LR +   +  V TLAGNG +     
Sbjct: 266 DEALFHEPQGLALLPEDVAERVGYDVVVADSVNHRLRGLRLSDGYVSTLAGNGVQKLIDS 325

Query: 701 -------GSDYQG----------GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH 743
                    D +G          GE  T+  L+SPWDV + P   +V IAMAG HQ+++ 
Sbjct: 326 ERAKEAAAVDDEGDVAVDLADLPGEP-TAISLSSPWDVVWHPALGRVVIAMAGTHQLFDF 384

Query: 744 STVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
             V G     +G   E  L+G +     FAQPSG+S+  D   ++VADSE+S++R +   
Sbjct: 385 DPVTGALAVHAGTALEGLLDGDAG-RAWFAQPSGLSVGADGA-LWVADSETSAVRWVRTG 442

Query: 804 TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
             G R +          LF FG  DG      LQH LGV    +G + +AD+YN  I++ 
Sbjct: 443 EDGRREVG---TAVGAGLFDFGHVDGEADRARLQHALGVTALPDGSVLIADTYNGAIRRY 499

Query: 864 DPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            PA    +     G+A     + +A  L EP+ ++   +     AD N+  I  ++ N
Sbjct: 500 APAGEDAA-----GRAVPATVSTVARGLLEPSDVLVEHD-----ADGNDTAIVVVESN 547


>gi|311112964|ref|YP_003984186.1| NHL repeat-containing protein [Rothia dentocariosa ATCC 17931]
 gi|310944458|gb|ADP40752.1| NHL repeat-containing protein [Rothia dentocariosa ATCC 17931]
          Length = 667

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 181/518 (34%), Positives = 256/518 (49%), Gaps = 63/518 (12%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       + L+GK+V+LDFWT CCINC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 31  WLNTGEKSLDLQTLRGKIVILDFWTLCCINCLHVLDELRPLEEEFSDVLVTV-GVHSPKF 89

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+  AV RY I HPV++D ++  W+     +WPT  V+ P G ++A L+GEGH
Sbjct: 90  EHEADPVALAAAVDRYDIKHPVLDDPELTTWQAYTARAWPTLVVIDPEGYIVAHLSGEGH 149

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT-SPLKFPGK---LAIDILNN 613
            + L  LV   +  +  K  L     P        PR  T     FPGK   L  +    
Sbjct: 150 VQGLTSLVRELVAEHEAKGTLHRGDGPYV------PRPKTEGTFAFPGKAIELPTEFGPK 203

Query: 614 RLF--------ISDSNHNRIVVTDLDGNFIVQI---GSSGEEGLRDGSFDDATFNRPQGL 662
            LF        +SD+  +RI+    D N ++     G  GE+G  DG+   A FN PQGL
Sbjct: 204 NLFGTGARTYLVSDTARHRILQVAEDLNTVLATYGGGEDGEKGYADGTGTTARFNEPQGL 263

Query: 663 AY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTK----GSDYQGGEK--- 709
           A      ++ L Y   + DT NH LR ++     VRTLAGNG +    G +   G     
Sbjct: 264 ALVPAELREKLGYDVLITDTVNHRLRSLNLRTGEVRTLAGNGVQRVIDGDNAVTGNANHI 323

Query: 710 -----GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNG 764
                 T+  L+SPWD  Y     +  IAMAG HQ++ +  V      F+G G E  L  
Sbjct: 324 PADAPATAVALSSPWDAVYSRAAGQFVIAMAGTHQLFGYDPVSETVSIFAGAGVE-GLQD 382

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL-KTGGSRLLAGGDPIFPDNLFK 823
            ++ +  FAQPSGI  + D   ++V  SE+S +R +   +    R            LF 
Sbjct: 383 GTAEDAWFAQPSGIIEARD-GSLWVVCSETSGLRHVTFTRDDHGRQSVQVTSAVGLGLFD 441

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
           FG  DG      +QHPLG+    +G I VAD+YN  I++ DPA+  +ST           
Sbjct: 442 FGFVDGDSQTSRMQHPLGLAELPDGSIAVADTYNGAIRRWDPAAKELST----------- 490

Query: 884 GAALAAQLSEPAGI----IEAQNGNLFIADTN-NNIIR 916
              L   L+EPA +    I  ++  L I +TN + ++R
Sbjct: 491 ---LQRGLAEPADLLVEHIPGEDPRLIIVETNAHQLVR 525



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 16/193 (8%)

Query: 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSR 808
           G+  E+     +     F +P G++L P  +      ++ + D+ +  +R+LNL+TG  R
Sbjct: 240 GEDGEKGYADGTGTTARFNEPQGLALVPAELREKLGYDVLITDTVNHRLRSLNLRTGEVR 299

Query: 809 LLAG--------GDPIFPDNLFKFGDRDGMGSEVLLQHPL-GVYCAKNGQIYVADSYNHK 859
            LAG        GD     N       D   + V L  P   VY    GQ  +A +  H+
Sbjct: 300 TLAGNGVQRVIDGDNAVTGNANHI-PADAPATAVALSSPWDAVYSRAAGQFVIAMAGTHQ 358

Query: 860 IKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           +   DP S  VS  AG G  G +DG A  A  ++P+GIIEA++G+L++  +  + +R++ 
Sbjct: 359 LFGYDPVSETVSIFAGAGVEGLQDGTAEDAWFAQPSGIIEARDGSLWVVCSETSGLRHVT 418

Query: 920 LNKEEPELQTLEL 932
             +++   Q++++
Sbjct: 419 FTRDDHGRQSVQV 431


>gi|256380948|ref|YP_003104608.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Actinosynnema mirum DSM 43827]
 gi|255925251|gb|ACU40762.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Actinosynnema mirum DSM 43827]
          Length = 612

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/452 (35%), Positives = 230/452 (50%), Gaps = 44/452 (9%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT         L+GKVV+LDFWT+CCINC+HVL +L  LE ++ D+    +GVHS KF
Sbjct: 25  WLNTGDQDITLAQLRGKVVLLDFWTFCCINCLHVLDELRPLEAEFADV-LVTIGVHSPKF 83

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D +A+  AV RY + HPV++D ++  W+   V +WPT  VV P G ++   AGEGH
Sbjct: 84  VHEADPDALVAAVERYEVHHPVLDDPELTTWQNYAVKAWPTLVVVDPEGYVVHVAAGEGH 143

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
              L  ++   +  +  K          +L + + P +   P    L+FP K A+     
Sbjct: 144 VDALRQVITELIAEHEAKG---------TLHRGDGPYVAPPPPDTALRFPAK-AVLTPAG 193

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA---------- 663
            L +SDS H+ +V    DG  +++   +GE G  DG   + TF+ P G+A          
Sbjct: 194 TLLVSDSAHHSLVELAADGETVLRRVGTGERGRADGL--EPTFSEPAGIALLPPEVAATT 251

Query: 664 -YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
            Y+A      VADT NH LR ++     V T+AG G +  D           L SPWDV 
Sbjct: 252 GYHA-----VVADTVNHLLRGLNLDTGEVTTVAGTGEQWRDGATDGPADEIPLTSPWDVV 306

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
           +      V IA+AG H +     V G     +G   E  LN   +    FAQ SG  L+ 
Sbjct: 307 WWEPANAVAIALAGNHTLGLFDPVAGRLERLAGTTVE-GLNDGPADQAFFAQTSG--LAS 363

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
           D   +++ DSE+S++R L+        +  G       LF FG RDG   + LLQHPLGV
Sbjct: 364 DGERLWLVDSETSALRWLDPDRTVHTAVGKG-------LFDFGHRDGPADQALLQHPLGV 416

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
               +G + +AD+YN  +++ DPA+  VST+A
Sbjct: 417 TALPDGSVAIADTYNGAVRRYDPATGEVSTIA 448



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 15/166 (9%)

Query: 765 SSSLNTSFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
           +  L  +F++P+GI+L P  +         VAD+ +  +R LNL TG    +AG      
Sbjct: 227 ADGLEPTFSEPAGIALLPPEVAATTGYHAVVADTVNHLLRGLNLDTGEVTTVAGTG---- 282

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG 877
              ++ G  DG   E+ L  P  V +      + +A + NH +   DP + R+  LAG  
Sbjct: 283 -EQWRDGATDGPADEIPLTSPWDVVWWEPANAVAIALAGNHTLGLFDPVAGRLERLAGTT 341

Query: 878 KAGFKDGAALAAQLSEPAGIIEAQNG-NLFIADTNNNIIRYLDLNK 922
             G  DG A  A  ++ +G+  A +G  L++ D+  + +R+LD ++
Sbjct: 342 VEGLNDGPADQAFFAQTSGL--ASDGERLWLVDSETSALRWLDPDR 385



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 9/96 (9%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P        G + V+DS +H + +L      V    G G+ G  DG  L    SEPA
Sbjct: 181 LRFPAKAVLTPAGTLLVSDSAHHSLVELAADGETVLRRVGTGERGRADG--LEPTFSEPA 238

Query: 896 GI------IEAQNG-NLFIADTNNNIIRYLDLNKEE 924
           GI      + A  G +  +ADT N+++R L+L+  E
Sbjct: 239 GIALLPPEVAATTGYHAVVADTVNHLLRGLNLDTGE 274


>gi|433610083|ref|YP_007042452.1| Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Saccharothrix espanaensis DSM 44229]
 gi|407887936|emb|CCH35579.1| Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Saccharothrix espanaensis DSM 44229]
          Length = 630

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/450 (36%), Positives = 244/450 (54%), Gaps = 41/450 (9%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       ++L+GKVV+LDFWT+CCINC+HVL +L  LE ++ D+    +GVHS KF
Sbjct: 42  WLNTGGRDISLKELRGKVVLLDFWTFCCINCLHVLDELRPLEAEFADV-LVTIGVHSPKF 100

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E D EA+ +AV RYG+ HPV++D ++  W+   V +WPT  +V P G ++   AGEGH
Sbjct: 101 VHEADAEALADAVERYGVHHPVLDDPELTTWQNYAVKAWPTLVLVDPEGYVVHVAAGEGH 160

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP----LKFPGKLAIDILNN 613
              L  +V          +L++      +L + + P +  +P    L+FP K A+   + 
Sbjct: 161 VDALRQIV---------AELVEEHDAKGTLHRGDGPYVPPAPADTELRFPAK-ALLTPSG 210

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNL 670
            + +SDS H+R+V  D DG   ++   +GE G RDG   + +F+ P GLA         +
Sbjct: 211 TILVSDSAHHRLVELDTDGETALRRIGTGERGRRDGL--NPSFSEPAGLALLPAEVAARV 268

Query: 671 LY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPWDVCYK 724
            Y   VADT NH LR ++     V T+AG G +   ++GGE     L   L SPWDV + 
Sbjct: 269 GYHVVVADTVNHLLRGLNLDTGEVTTVAGTGEQ---WRGGETDGPALDIPLTSPWDVAWW 325

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
                V IA+AG H +   +  +     F+G   E  L+        FAQ SG++ + D 
Sbjct: 326 EPAGGVVIALAGNHTLGLFNPAEDRLERFAGTTVE-GLSDGPFAEAFFAQTSGLAAAGD- 383

Query: 785 MEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
             +++ DSE+S++R   L+ G  R   G        LF FG RDG   + LLQHPLGV  
Sbjct: 384 -RLWLVDSETSALR--YLEDGQVRTAVG------KGLFDFGHRDGDADQALLQHPLGVAV 434

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
             +G + +AD+YN  +++ DPA+  V TLA
Sbjct: 435 LPDGSVAIADTYNGAVRRYDPATGEVGTLA 464



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 22/200 (11%)

Query: 730 VYIAMAGQHQIWEHSTVDGVT---RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM- 785
           + ++ +  H++ E  T DG T   R  +G+   R+      LN SF++P+G++L P  + 
Sbjct: 212 ILVSDSAHHRLVELDT-DGETALRRIGTGERGRRD-----GLNPSFSEPAGLALLPAEVA 265

Query: 786 -----EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                 + VAD+ +  +R LNL TG    +AG         ++ G+ DG   ++ L  P 
Sbjct: 266 ARVGYHVVVADTVNHLLRGLNLDTGEVTTVAG-----TGEQWRGGETDGPALDIPLTSPW 320

Query: 841 GV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
            V +    G + +A + NH +   +PA +R+   AG    G  DG    A  ++ +G+  
Sbjct: 321 DVAWWEPAGGVVIALAGNHTLGLFNPAEDRLERFAGTTVEGLSDGPFAEAFFAQTSGLAA 380

Query: 900 AQNGNLFIADTNNNIIRYLD 919
           A +  L++ D+  + +RYL+
Sbjct: 381 AGD-RLWLVDSETSALRYLE 399



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 9/96 (9%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P       +G I V+DS +H++ +LD          G G+ G +DG  L    SEPA
Sbjct: 198 LRFPAKALLTPSGTILVSDSAHHRLVELDTDGETALRRIGTGERGRRDG--LNPSFSEPA 255

Query: 896 GI------IEAQNG-NLFIADTNNNIIRYLDLNKEE 924
           G+      + A+ G ++ +ADT N+++R L+L+  E
Sbjct: 256 GLALLPAEVAARVGYHVVVADTVNHLLRGLNLDTGE 291


>gi|375098226|ref|ZP_09744491.1| Peroxiredoxin [Saccharomonospora marina XMU15]
 gi|374658959|gb|EHR53792.1| Peroxiredoxin [Saccharomonospora marina XMU15]
          Length = 673

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 176/551 (31%), Positives = 262/551 (47%), Gaps = 82/551 (14%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT         L+G++V+LDF+T  CINC+HVL +L  +E +++D+  T+ GVHS KF
Sbjct: 37  WLNTDGKGLELSSLRGRIVLLDFFTSGCINCLHVLDELRPIEDEFRDVLVTI-GVHSPKF 95

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
            +E + +AIR AV RYG+ HPV+ND D+  W++  V +WPT  VV P G ++   AGEGH
Sbjct: 96  SHEGEQDAIRAAVERYGVRHPVLNDPDLTTWQQYAVKAWPTLVVVDPEGYVVHVAAGEGH 155

Query: 558 RKDLDDLVEAALLFYGKKKLL-----------DNTPLPLSLEKDNDPRLFT--------- 597
            + L  ++   L  +  K  L            + P   +   +  PR            
Sbjct: 156 AEALRRVINDLLGIHEAKGTLRRNGESGQPQAGDGPGDGASTTEQRPRATEQTEQAGQAG 215

Query: 598 ---------------SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG 642
                          S L+FP K A+     R+ ++D+  + +     D   +V+   SG
Sbjct: 216 QAGQAEATEQAQQPGSGLRFPAK-AVVTAEGRVLVADTAQHSVAEFASDAETLVRRFGSG 274

Query: 643 EEGLRDGSFDDATFNRPQGLAYNAKK------NLLYVADTENHALREIDFVNDTVRTLAG 696
             G  DG+FD A F  P GL     +        L VADT NH LR +D     V T+AG
Sbjct: 275 VRGHADGAFDVAAFAEPSGLTLLPTEIAERVGYHLVVADTGNHLLRGVDLRTGAVTTVAG 334

Query: 697 NGTKGSDYQGGEKGTS--QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS 754
            G +  D  G + GT+    L SPWDV +      V +AMAG H +     V+   R  +
Sbjct: 335 TGEQWRD--GADAGTALDVALTSPWDVRWWEAAGGVVVAMAGNHTLSLFDPVERTVRRLA 392

Query: 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGD 814
           G   E  L    +     AQPSG++   D   +++ D+E+S++R L            GD
Sbjct: 393 GTTVE-GLRDGPAAEALLAQPSGLAARGD--RLWLVDAETSALRWLQRD---------GD 440

Query: 815 PIFP------DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
             F        +LF FG RDG   + LLQHPLGV    +G + VAD+YN  +++ DPAS 
Sbjct: 441 AGFTLHTAVGSDLFSFGHRDGRAGQALLQHPLGVAVLPDGAVAVADTYNGAVRRYDPASG 500

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQ 928
            VST              +   L+EP+G      G + + ++  + +R L+   E  +++
Sbjct: 501 EVST--------------IMTGLAEPSGFAGTDVG-MLVVESAAHRLRLLE-AAESDQVE 544

Query: 929 TLELKGVQPPT 939
             EL+  +P T
Sbjct: 545 GEELQVQRPAT 555


>gi|269957976|ref|YP_003327765.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Xylanimonas cellulosilytica DSM 15894]
 gi|269306657|gb|ACZ32207.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Xylanimonas cellulosilytica DSM 15894]
          Length = 688

 Score =  248 bits (634), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 167/510 (32%), Positives = 249/510 (48%), Gaps = 82/510 (16%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT        DL+G+VVVLDFWT+CC+NC+HVL +L  LE +Y D+   +VGVHS KF
Sbjct: 19  WLNTGGRDLSLADLRGRVVVLDFWTFCCLNCLHVLDELRELEARYHDV-LVIVGVHSPKF 77

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D +A+  AV RY + HPV++D ++  W      +WPT  V+ P G ++AQ+AGEGH
Sbjct: 78  EHEADPDALAAAVERYSVEHPVLDDPELRTWDAYTARAWPTLVVIDPEGYVVAQMAGEGH 137

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFI 617
              L  LVE+ +  +  K  L     P        P   +  L+FP K AI +    L +
Sbjct: 138 ASALAALVESLVAEHEAKGTLHRGEGPYV-----PPEPTSGTLRFPAK-AITLPGGTLLV 191

Query: 618 SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNLLY-- 672
           +D+ H+ +     DG  +V+   SG+ GL DG  D+A F  P GL     + +  L Y  
Sbjct: 192 ADAGHHSLAELAPDGETLVRRIGSGQRGLLDGGPDEARFAEPNGLCLVPEDLRGRLGYDV 251

Query: 673 -VADTENHALREIDFVNDTVRTLAGNGTK--------------------GSDYQGGEKGT 711
            VADT NHALR +   +  V TLAG G +                    G +++    G+
Sbjct: 252 VVADTVNHALRGVRLADGLVVTLAGTGEQFMVGGQENVTLGGRSRAYDVGEEFRADASGS 311

Query: 712 ------------SQLLNSPWDVCYKPINEKVYIAMAGQHQIW------EHSTVDGVTRAF 753
                       +  L+SPWDV +  +     +AMAG H +W            G  R  
Sbjct: 312 VAGRVPEELPASAVRLSSPWDVAWSGVAGVFLVAMAGTHTLWLFDPTAPRPGAYGTVRLL 371

Query: 754 SGDGYERNLNGSSSLNTSFAQPSGISLS---------------PDFMEI-----YVADSE 793
           +G   E  ++G       FAQPSG++ S                D  ++     +VAD+E
Sbjct: 372 AGTMNEGLVDGVGD-TCWFAQPSGLARSTRGAYLMGGDDVFSAADAEQLGQETFWVADAE 430

Query: 794 SSSIRALNLKTGGSRLLAGGDPIFPD-NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYV 852
           +S++R++ +      ++A     +    LF FG RDG   +  LQHPLGV    +G + V
Sbjct: 431 TSALRSVVVSRQPPAVVAASVLTWVGAGLFDFGHRDGDLVDARLQHPLGVVALPDGSVVV 490

Query: 853 ADSYNHKIKKLDP--------ASNRVSTLA 874
           AD+YN  +++++          + RV+TLA
Sbjct: 491 ADTYNGALRRVETWWDDVAQQETGRVTTLA 520


>gi|383809217|ref|ZP_09964739.1| redoxin [Rothia aeria F0474]
 gi|383447965|gb|EID50940.1| redoxin [Rothia aeria F0474]
          Length = 667

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 182/518 (35%), Positives = 258/518 (49%), Gaps = 63/518 (12%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       + L+GK+V+LDFWT CCINC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 31  WLNTGEKNLDLQALRGKIVILDFWTLCCINCLHVLDELRPLEEEFSDVLVTV-GVHSPKF 89

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+  AV RY I HPV++D ++  W+     +WPT  V+ P G ++A L+GEGH
Sbjct: 90  EHEADPVALAAAVDRYDIKHPVLDDPELTTWQAYTARAWPTLVVIDPEGYIVAHLSGEGH 149

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT-SPLKFPGK---LAIDILNN 613
            + L  LV   +  + +K  L     P        PR  T     FPGK   L  +    
Sbjct: 150 VQGLTSLVRELVAEHEEKGTLHRGDGPYV------PRPKTEGTFAFPGKAIELPTEFGPK 203

Query: 614 RLF--------ISDSNHNRIVVTDLDGNFIVQI---GSSGEEGLRDGSFDDATFNRPQGL 662
            LF        +SD+  +RI+    D N ++     G  GE+G  DG+   A FN PQGL
Sbjct: 204 NLFGTGARTYLVSDTARHRILQVAEDLNTVLAAYGGGEDGEKGYADGTGTTARFNEPQGL 263

Query: 663 AY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTK----GSDYQGGEK--- 709
           A      ++ L Y   + DT NH LR ++     VRTLAGNG +    G +   G     
Sbjct: 264 ALVPAELREKLGYDVLITDTVNHRLRSLNLRTGEVRTLAGNGVQRVIDGDNAVTGNANHI 323

Query: 710 -----GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNG 764
                 T+  L+SPWD  Y     +  IAMAG HQ++ +  V      F+G G E  L  
Sbjct: 324 PEDAPATAIALSSPWDAVYSREAGQFVIAMAGTHQLFGYDPVSETVSIFAGAGVE-GLQD 382

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI-----FPD 819
             + +  FAQPSGI  + D   ++VA SE+S +R +      +R   G   +        
Sbjct: 383 GPAEDAWFAQPSGIIEARD-GSLWVACSETSGLRHVTF----TRDEPGHQSVQVISAVGL 437

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
            LF FG  DG      +QHPLG+    +G I VAD+YN  I++ DPA   +STL    + 
Sbjct: 438 GLFDFGFVDGDSQTSRMQHPLGLAELPDGSIAVADTYNGAIRRWDPAVKELSTL----QR 493

Query: 880 GFKDGAALAAQLSEPAGIIEAQNGNLFIADTN-NNIIR 916
           G  + A L  + S        ++  L I +TN + ++R
Sbjct: 494 GLAEPADLLVEHS------PGEDPRLIIVETNAHQLVR 525



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 16/193 (8%)

Query: 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSR 808
           G+  E+     +     F +P G++L P  +      ++ + D+ +  +R+LNL+TG  R
Sbjct: 240 GEDGEKGYADGTGTTARFNEPQGLALVPAELREKLGYDVLITDTVNHRLRSLNLRTGEVR 299

Query: 809 LLAG--------GDPIFPDNLFKFGDRDGMGSEVLLQHPL-GVYCAKNGQIYVADSYNHK 859
            LAG        GD     N     + D   + + L  P   VY  + GQ  +A +  H+
Sbjct: 300 TLAGNGVQRVIDGDNAVTGNANHIPE-DAPATAIALSSPWDAVYSREAGQFVIAMAGTHQ 358

Query: 860 IKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           +   DP S  VS  AG G  G +DG A  A  ++P+GIIEA++G+L++A +  + +R++ 
Sbjct: 359 LFGYDPVSETVSIFAGAGVEGLQDGPAEDAWFAQPSGIIEARDGSLWVACSETSGLRHVT 418

Query: 920 LNKEEPELQTLEL 932
             ++EP  Q++++
Sbjct: 419 FTRDEPGHQSVQV 431


>gi|184200016|ref|YP_001854223.1| hypothetical protein KRH_03700 [Kocuria rhizophila DC2201]
 gi|183580246|dbj|BAG28717.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 690

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/527 (32%), Positives = 258/527 (48%), Gaps = 44/527 (8%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           R TTP+         WLNT       + L+GK+V+LDFW++CCINC+HVL +L  LE++Y
Sbjct: 5   RMTTPVRASELEGRAWLNTGGEALDLQSLRGKIVILDFWSFCCINCLHVLDELRPLEEQY 64

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
            D+    VGVHS KF++E D +A+  AV RY ++HPV++D ++  W      +WPT  VV
Sbjct: 65  ADV-LVTVGVHSPKFEHEADPDALAAAVDRYELTHPVLDDPELRTWDAYTARAWPTLVVV 123

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLD--NTPLPLSLEKDNDPRLFTSPL 600
            P G ++A L+GEGH + L+ LV   +  +  K  L   + P     + + D       L
Sbjct: 124 DPEGYIVAHLSGEGHVQGLESLVTELVAEHEAKGTLHRGDGPYVPRPQPEGD-------L 176

Query: 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           +FPGK+ + + +    +SD+ H+R+V  + D   + +   SG  G  DG  D A FN PQ
Sbjct: 177 RFPGKV-VALPDGSFMVSDTGHHRLVQLESDLTTVRRAIGSGARGWSDGPRDVARFNEPQ 235

Query: 661 GLAYNAKKNL------LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG---- 710
           G+A    +        L VADT NH LR +D  + +VRTLAGNG +        +G    
Sbjct: 236 GIAVLPGRLRSEVGYDLVVADTVNHRLRGVDLGSGSVRTLAGNGVQRLLDDARARGVDPN 295

Query: 711 -------TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN 763
                  TS  L+SPWDV +    + + +AMAG HQ++      G     +G G E  L 
Sbjct: 296 EITDTEPTSVALSSPWDVVWSDAADTLVVAMAGTHQLFSFDPRTGALAVLAGTGDE-GLR 354

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
             S+  + FAQPSG++      +++VADSESS++R +       RL              
Sbjct: 355 DGSAHESWFAQPSGLAQDA-HGDVWVADSESSALRRV-------RLPGHDAAAPGAAAAP 406

Query: 824 FGDRDGMGSEVLLQHPLGVYCA--KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA-- 879
               +G+ +  +   P G        G    +D          P +   +  + +G    
Sbjct: 407 AAGSEGIFARAVDALPSGAASTTPSTGAAAPSDGATTPGGVGAPGTGAATVDSAVGLGLF 466

Query: 880 --GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
             GF+DG A  A+L    G+    +G++ +ADT N  +R  D   +E
Sbjct: 467 DFGFRDGPAADARLQHCLGVTVLPDGSVAVADTYNGAVRRYDPATDE 513



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 36/54 (66%)

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            LF FG RDG  ++  LQH LGV    +G + VAD+YN  +++ DPA++ V+TL
Sbjct: 464 GLFDFGFRDGPAADARLQHCLGVTVLPDGSVAVADTYNGAVRRYDPATDEVTTL 517



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P  V    +G   V+D+ +H++ +L+     V    G G  G+ DG    A+ +EP 
Sbjct: 176 LRFPGKVVALPDGSFMVSDTGHHRLVQLESDLTTVRRAIGSGARGWSDGPRDVARFNEPQ 235

Query: 896 GI------IEAQNG-NLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
           GI      + ++ G +L +ADT N+ +R +DL      ++TL   GVQ
Sbjct: 236 GIAVLPGRLRSEVGYDLVVADTVNHRLRGVDLGSG--SVRTLAGNGVQ 281


>gi|403363814|gb|EJY81656.1| NHL repeat-containing protein 2 [Oxytricha trifallax]
          Length = 478

 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 162/443 (36%), Positives = 246/443 (55%), Gaps = 38/443 (8%)

Query: 525 MNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP 584
           M +W++    SWP   +V P G  +  L GEG+R  LD  +  A  F+   K+  N  + 
Sbjct: 1   MQVWKDFERRSWPGLLIVSPRGAPILILNGEGYRDVLDLFLSIAFDFF-YDKMNHNPTIK 59

Query: 585 LSLEKDN------DPRLFTSP-------LKFPGK-LAID----ILNNRLFISDSNHNRIV 626
           + LE+        D +L           L++PGK L I+    + NN + ISD+ +NR++
Sbjct: 60  IELEESKASAVKKDKQLSAEEITAQNQNLRYPGKVLCIEKQKGLDNNLMIISDTGNNRLI 119

Query: 627 VTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL--LYVADTENHALREI 684
           + + +      +  +G+ GL DG++++ +F+ PQG+ +  + N+  +Y+ DT+NHA+REI
Sbjct: 120 IVNEETLECQGVIGNGKIGLVDGNYEEGSFHHPQGMCHIYRDNMHFIYLCDTKNHAIREI 179

Query: 685 DFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN-EKVYIAMAGQHQIWEH 743
           +     V T+ G G KG D +G ++   Q L+SPWD+    +N + + IAMAG HQIW  
Sbjct: 180 NLTKKEVLTVIGTGEKGFDREGNKEPELQKLSSPWDIV--AVNRDTLLIAMAGVHQIWAL 237

Query: 744 STVDGVTRAFSGDGYERNLNGSSSLNTS-FAQPSGISL---SPDFMEIYVADSESSSIRA 799
           +        FSG G E NLN    L  S +AQPSG+SL   S   +E+YVADSESS IR+
Sbjct: 238 NLKTNRCFNFSGSGKEGNLNHKYDLKLSEWAQPSGLSLGIISSTKVELYVADSESSCIRS 297

Query: 800 LNLKT-GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYN 857
           +N+K+   +R + GGD   P NL  +GD DG  +   LQHPLGV +      + VAD+YN
Sbjct: 298 INMKSLKATRGIVGGDT-NPKNLHAYGDIDGQSTTARLQHPLGVHFIGDKNVVLVADTYN 356

Query: 858 HKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-----IEAQNGNLFIADTNN 912
           HKIK +DP  N V T  G GKA  KD +   +  +EP+G       +  +  ++IAD NN
Sbjct: 357 HKIKVIDPFRNEVFTWLGNGKAALKDESTFNSSFNEPSGFGSIFDKKINDVRIYIADCNN 416

Query: 913 NIIRYLDLNKEEPELQTLELKGV 935
           + IR +    ++ E +T + KG+
Sbjct: 417 HCIRSVIY--DQGEAKTCQFKGI 437


>gi|383829668|ref|ZP_09984757.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           xinjiangensis XJ-54]
 gi|383462321|gb|EID54411.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora
           xinjiangensis XJ-54]
          Length = 681

 Score =  245 bits (626), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 183/548 (33%), Positives = 260/548 (47%), Gaps = 90/548 (16%)

Query: 439 WLNTA--PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           W NT   PL     L+GK+V+LDFWT  C+NC+HVL +L  LE+++ D+  TV GVHS K
Sbjct: 26  WWNTGGEPLTLA-GLRGKIVLLDFWTSGCVNCLHVLDELRPLEEEFADVLVTV-GVHSPK 83

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F +E   +++  AV R G+ HPVV+D DM LW+E  V +WPT  VV P G ++   AGEG
Sbjct: 84  FAHEGGRDSVAAAVARLGVEHPVVSDPDMRLWQEYAVKAWPTLVVVDPEGYVVHVAAGEG 143

Query: 557 H----RKDLDDLV----EAALLFYGKKKL--LDNTPLPLSLEKDN--------------- 591
           H    R+ + DLV      A L  G   L    NT  P +  +D+               
Sbjct: 144 HGDALRRVIGDLVALHERNATLRRGPNALDRAPNTGQPNATGQDHTTDQGRPTGRGQASG 203

Query: 592 DPRLFTSP------------LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIG 639
             R    P            L FP + A+     R+ ++D+ ++ I     D   +++  
Sbjct: 204 QDRTAGQPHATGRTARRLDGLWFPSR-AVVTAEGRVLVADAANHSIAEFASDAETLLRRF 262

Query: 640 SSGEEGLRDGSFDDATFNRPQGL-------AYNAKKNLLYVADTENHALREIDFVNDTVR 692
             GE G  DG+FD A F  P GL       A     +LL VADT NH LR ID     VR
Sbjct: 263 GDGERGAVDGAFDIARFAEPSGLTLLPTHIAEQVGYHLL-VADTANHLLRAIDLRTGAVR 321

Query: 693 TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
           T+AG G +  D           L SPWDV +      V +AMAG H +     V+     
Sbjct: 322 TVAGTGRQWRDGDDSGAALDVDLTSPWDVRWWDTVGGVVVAMAGNHTLSLFDPVEATVSR 381

Query: 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL------------ 800
           F+G   E  L   ++    FAQ SG+++  D   +++ D+E+S++R +            
Sbjct: 382 FAGTTVE-GLRDGAATEAFFAQTSGLAVDGD--RLWLVDAETSALRYVERVGDTGDAGAT 438

Query: 801 --NLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
               ++GG   R   G D      LF FG RDG     LLQHPLGV    +G I VAD+Y
Sbjct: 439 DKTAESGGFVVRTAVGQD------LFTFGHRDGAADTALLQHPLGVTVLPDGSIGVADTY 492

Query: 857 NHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           N  +++ DP++  V+T              LA  L+EP+G      G L + ++  + + 
Sbjct: 493 NGAVRRFDPSTGVVTT--------------LARDLAEPSGFAVTDAGVLVV-ESAAHRLS 537

Query: 917 YLDLNKEE 924
            LDL  ++
Sbjct: 538 PLDLGGDD 545


>gi|300743712|ref|ZP_07072732.1| putative NHL repeat protein [Rothia dentocariosa M567]
 gi|300380073|gb|EFJ76636.1| putative NHL repeat protein [Rothia dentocariosa M567]
          Length = 667

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 173/474 (36%), Positives = 243/474 (51%), Gaps = 52/474 (10%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       + L+GK+V+LDFWT CCINC+HVL +L  LE+++ D+  TV GVHS KF
Sbjct: 31  WLNTGEKNLDLQALRGKIVILDFWTLCCINCLHVLDELRPLEEEFSDVLVTV-GVHSPKF 89

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
           ++E D  A+  AV RY I HPV++D ++  W+     +WPT  V+ P G ++A L+GEGH
Sbjct: 90  EHEADPAALAAAVDRYDIKHPVLDDPELTTWQAYTARAWPTLVVIDPEGYIVAHLSGEGH 149

Query: 558 RKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT-SPLKFPGK---LAIDILNN 613
            + L  LV   +  + +K  L     P        PR  T     FPGK   L  +    
Sbjct: 150 VQGLTSLVRELVAEHEEKGTLHRGDGPYV------PRPKTEGTFAFPGKAIELPTEFGPK 203

Query: 614 RLF--------ISDSNHNRIVVTDLDGNFIVQI---GSSGEEGLRDGSFDDATFNRPQGL 662
            LF        +SD+  +RI+    D N ++     G  GE+G  DG+   A FN PQGL
Sbjct: 204 NLFGTGSRTYLVSDTARHRILQVAEDLNTVLATYGGGEDGEKGYADGTGTTARFNEPQGL 263

Query: 663 AY---NAKKNLLY---VADTENHALREIDFVNDTVRTLAGNGTK----GSDYQGGEK--- 709
           A      ++ L Y   + DT NH LR ++     VRTLAGNG +    G +   G     
Sbjct: 264 ALVPAELREKLGYDVLITDTVNHRLRSLNLRTGEVRTLAGNGVQRVIDGDNAVTGNANHI 323

Query: 710 -----GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNG 764
                 T+  L+SPWD  Y     +  IAMAG HQ++ +  V      F+G G E  L  
Sbjct: 324 PADAPATAIALSSPWDAVYSREAGQFVIAMAGTHQLFGYDPVSETISIFAGAGVE-GLQD 382

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN---- 820
            ++ +  FAQPSGI  + D   ++VA SE+S +R +      +R   G   +   +    
Sbjct: 383 GTAEDAWFAQPSGIIEARD-GNLWVACSETSGLRHVTF----TRDEHGHQSVQVTSAVGL 437

Query: 821 -LFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            LF FG  DG      +QHPLG+    +G I VAD+YN  I++ DPA+  +STL
Sbjct: 438 GLFDFGFVDGDSQTSRMQHPLGLAELPDGSIAVADTYNGAIRRWDPAAKELSTL 491



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 16/193 (8%)

Query: 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFM------EIYVADSESSSIRALNLKTGGSR 808
           G+  E+     +     F +P G++L P  +      ++ + D+ +  +R+LNL+TG  R
Sbjct: 240 GEDGEKGYADGTGTTARFNEPQGLALVPAELREKLGYDVLITDTVNHRLRSLNLRTGEVR 299

Query: 809 LLAG--------GDPIFPDNLFKFGDRDGMGSEVLLQHPL-GVYCAKNGQIYVADSYNHK 859
            LAG        GD     N       D   + + L  P   VY  + GQ  +A +  H+
Sbjct: 300 TLAGNGVQRVIDGDNAVTGNANHI-PADAPATAIALSSPWDAVYSREAGQFVIAMAGTHQ 358

Query: 860 IKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           +   DP S  +S  AG G  G +DG A  A  ++P+GIIEA++GNL++A +  + +R++ 
Sbjct: 359 LFGYDPVSETISIFAGAGVEGLQDGTAEDAWFAQPSGIIEARDGNLWVACSETSGLRHVT 418

Query: 920 LNKEEPELQTLEL 932
             ++E   Q++++
Sbjct: 419 FTRDEHGHQSVQV 431


>gi|242017281|ref|XP_002429120.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212513984|gb|EEB16382.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 791

 Score =  233 bits (594), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 196/323 (60%), Gaps = 15/323 (4%)

Query: 403 GGSSQSERIQQFV-NYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW 461
           G   +++ +++ V  +I    N     +  +FP  LDWLN         LKGK+V+LDF+
Sbjct: 16  GNGKENKNVEEIVFEHIKRANNESEVKV--DFPTGLDWLNVNKPLSSELLKGKIVILDFF 73

Query: 462 TYCCINCMHVLPDLEFLEKKY--KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPV 519
           TY CINC H+ P +  LE+KY  KD    ++GVHS KF+NEK+ + I +A+ +YGI HPV
Sbjct: 74  TYGCINCFHMFPIIRKLEEKYSLKD-GVVIIGVHSGKFENEKNSKNIGDALKKYGIKHPV 132

Query: 520 VNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLD 579
           VND + +LW +  +  WPT  +  P+ K++  L G+ H+ DL+  V+ AL +Y  K  + 
Sbjct: 133 VNDKNSDLWNKYNIICWPTILISDPSQKIIFNLIGDQHKDDLELYVKVALKYY--KTSIS 190

Query: 580 NTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIG 639
              LP+    ++D  + +S LK+P K  I    N   +SDS ++RI++ +++G     IG
Sbjct: 191 THGLPIV---ESDEIISSSALKYPSK--ITRWGNLFAVSDSGNHRIIIFNVEGVVKYTIG 245

Query: 640 SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
              E+G +DG+F +A F+ P GLA+   +++LY+ADT NHA+R +D     V T+ GNG 
Sbjct: 246 GK-EQGFKDGNFQEALFDTPHGLAF-FNESILYIADTNNHAIRLVDLNKMIVTTVVGNGE 303

Query: 700 KGSDYQGGEKGTSQLLNSPWDVC 722
           +G+D  GG+ G +Q ++SPWDVC
Sbjct: 304 RGNDLIGGQIGNNQKISSPWDVC 326



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 172/361 (47%), Gaps = 49/361 (13%)

Query: 730  VYIAMAGQHQIWEHSTVDG----------VTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
            + IA +G HQIW +    G          V  A +G+G E N N        FAQP GI+
Sbjct: 463  LLIATSGTHQIWAYFLESGMWNGKMYKEKVCLAIAGNGKEENKNNDLPNKAGFAQPCGIT 522

Query: 780  LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
             S D   +++AD+ESSSIR L+L  G    LAGG   FP++LF FGD DG G  V LQHP
Sbjct: 523  YSEDLKVLFIADTESSSIRRLSLTKGSVTHLAGGSR-FPEDLFSFGDVDGKGYNVRLQHP 581

Query: 840  LGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAG-I 897
            LG+ +  K   ++V DSYNHKIK+++  +   S+L              +   SEP G  
Sbjct: 582  LGLTWNKKRKSLFVCDSYNHKIKQINVETGTTSSL-----------HKESNLFSEPGGCC 630

Query: 898  IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQ 957
            + + +  +++ DTNN+ I+ ++L KE+ E++ LE+K          S   +    + D  
Sbjct: 631  MSSCDDIIYVCDTNNHKIKTINLCKEK-EVEELEIKFETSNAEMKYSKDGIW---NEDII 686

Query: 958  TIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAV 1017
              V DG L      +     PEE H     + K   D    NA+I++   G +  +G   
Sbjct: 687  MNVDDGTLHMRAEFF-----PEEIH----GQWKIECD---SNAIILESTRGKI--DGKNW 732

Query: 1018 LHFRRMSPSVSTGRISCKVYY----CKEDEVCLYKPLLFEVPFQEEVPNSPPAEITLPYD 1073
              F ++ PS     I  K+++    C   E C+YK  + +V  + +  +   A   L  +
Sbjct: 733  QLFLKILPSTVNDTI--KIFFDFMICG-GETCIYKKKMLKVNIRRKENSIRAATCVLKKN 789

Query: 1074 L 1074
            L
Sbjct: 790  L 790



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 16/168 (9%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           G+  EE   +   + A F +P G+ Y+    +L++ADTE+ ++R +     +V  LAG  
Sbjct: 498 GNGKEENKNNDLPNKAGFAQPCGITYSEDLKVLFIADTESSSIRRLSLTKGSVTHLAGGS 557

Query: 699 TKGSD-YQGGE---KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS 754
               D +  G+   KG +  L  P  + +    + +++  +  H+I + +   G T +  
Sbjct: 558 RFPEDLFSFGDVDGKGYNVRLQHPLGLTWNKKRKSLFVCDSYNHKIKQINVETGTTSSLH 617

Query: 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
               E NL         F++P G  +S     IYV D+ +  I+ +NL
Sbjct: 618 K---ESNL---------FSEPGGCCMSSCDDIIYVCDTNNHKIKTINL 653



 Score = 47.4 bits (111), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIY-VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG 884
           + D + S   L++P  +   + G ++ V+DS NH+I   +       T+ G  + GFKDG
Sbjct: 198 ESDEIISSSALKYPSKI--TRWGNLFAVSDSGNHRIIIFNVEGVVKYTIGG-KEQGFKDG 254

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
               A    P G+       L+IADTNN+ IR +DLNK
Sbjct: 255 NFQEALFDTPHGLAFFNESILYIADTNNHAIRLVDLNK 292


>gi|389612944|dbj|BAM19866.1| similar to CG12547, partial [Papilio xuthus]
          Length = 372

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 185/332 (55%), Gaps = 16/332 (4%)

Query: 399 EQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTA-PLQFRRDLKGKVVV 457
           E      S+++R    VN+I  V +  T   V +F   L+W+N + P+   +    K+VV
Sbjct: 18  EALNTAGSEADRDILIVNHIKKVSSVVTA--VEDFKKDLEWVNVSEPISLSQHCSDKIVV 75

Query: 458 LDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIS 516
           LDFWTYCCINC HVLPDL  LEK +  +    V+GVH AKF+NEKD   I  AV RY I 
Sbjct: 76  LDFWTYCCINCYHVLPDLAHLEKLHSVENGLVVIGVHCAKFNNEKDSSNILAAVRRYNIH 135

Query: 517 HPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKK 576
           HPVVND D + W  LG++ WPT  ++GP  K L  L GEGHR++L   V  A+  +G + 
Sbjct: 136 HPVVNDADSSYWEALGIHCWPTLLILGPGNKPLFVLTGEGHREELVSFVGVAIRHFGFR- 194

Query: 577 LLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID-ILNNR-----LFISDSNHNRIVVTDL 630
            +    +P+S      P+     L+FP K+A++     R     L ISD+ ++R+++TD 
Sbjct: 195 -ISTAEIPMSPSNYIRPK-DCDVLQFPSKVALNPFYRGRGEEPFLAISDTGNHRVILTDC 252

Query: 631 DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDT 690
            G  I++I    E G +DG   +A  N PQG+ +    ++L V DT NHA+R +   + T
Sbjct: 253 SG-IILRIIGGPEPGFKDGKLSEARLNSPQGVCW-LSGSVLAVCDTNNHAVRAVHLDDGT 310

Query: 691 VRTLAGNGTKGSDYQ-GGEKGTSQLLNSPWDV 721
           V  L G G +      GG+    Q L+SPWDV
Sbjct: 311 VEVLVGTGEQSHTGDLGGKCLGMQALSSPWDV 342



 Score = 44.3 bits (103), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 19/165 (11%)

Query: 775 PSGISLSPDFMEIYVADSESS-----SIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
           P+ + L P    ++V   E       S   + ++  G R+     P+ P N  +  D D 
Sbjct: 156 PTLLILGPGNKPLFVLTGEGHREELVSFVGVAIRHFGFRISTAEIPMSPSNYIRPKDCD- 214

Query: 830 MGSEVLLQHP----LGVYCAKNGQ---IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
                +LQ P    L  +    G+   + ++D+ NH++   D  S  +  + G  + GFK
Sbjct: 215 -----VLQFPSKVALNPFYRGRGEEPFLAISDTGNHRVILTD-CSGIILRIIGGPEPGFK 268

Query: 883 DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPEL 927
           DG    A+L+ P G+       L + DTNN+ +R + L+    E+
Sbjct: 269 DGKLSEARLNSPQGVCWLSGSVLAVCDTNNHAVRAVHLDDGTVEV 313


>gi|349603355|gb|AEP99217.1| NHL repeat-containing protein 2-like protein, partial [Equus
            caballus]
          Length = 456

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/451 (35%), Positives = 234/451 (51%), Gaps = 55/451 (12%)

Query: 649  GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
            G+F ++T N PQG+A     N++YV DTENH +R+ID   + V T+AG G +G+D +GG 
Sbjct: 1    GTFSESTSNSPQGVAI--MNNIIYVQDTENHLIRKIDLEAEMVSTVAGIGIQGTDKEGGA 58

Query: 709  KGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW-----------EHSTVDGVTR 751
            +G  Q ++SPWDV +     +V      +IAMAG HQIW           ++    G   
Sbjct: 59   EGEQQPISSPWDVVFGTSGSEVQRDDILWIAMAGTHQIWALLLDSGRLPKKNELKKGTCL 118

Query: 752  AFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRL 809
             F+G G E N N +      FAQPSG+S++ +  +  ++VADSESS++R ++LK G  + 
Sbjct: 119  RFAGSGNEENRNNAYPHKAGFAQPSGLSVASEDPWSCLFVADSESSTVRTVSLKDGAVKH 178

Query: 810  LAGG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPA 866
            L GG  DP+   +LF FGD DG+G    LQHPLGV +  K   +YVADSYNHKIK +DP 
Sbjct: 179  LVGGERDPM---DLFAFGDVDGVGINAKLQHPLGVTWDKKRNLVYVADSYNHKIKVVDPK 235

Query: 867  SNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE 924
            +   +TLAG G A     ++   +  +EP G+   +NG  L++ADTNN+ I+ +DL  + 
Sbjct: 236  TKTCTTLAGTGDASNVISSSFTQSTFNEPGGLCIGENGQLLYVADTNNHQIKVMDLETKM 295

Query: 925  PE---LQTLELKGVQPPTPKSRSPKRLRR--RSSPDAQTIVVDGGLSNEGNIYLKISLPE 979
                 L T E   V  P P+ +  K L R  +S+P  +   V           L++ LP 
Sbjct: 296  ISVLPLFTSENTVVDGPFPEEKQ-KTLPRLPKSAPAVKLSPVAASPGQTLQFKLRLDLPS 354

Query: 980  EYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTG--------- 1030
                ++ A S + +  E    +    L G + P G   +      P++S           
Sbjct: 355  GAKLTEGAPSCWFLTAEGNEWL----LQGQI-PSGE--IESISNQPTISLQIPGDCVSLE 407

Query: 1031 ---RISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
                +S  +YYC  D   C+ K +LF  P Q
Sbjct: 408  AVISVSVFLYYCSADSSACMMKGILFSQPLQ 438



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 615 LFISDSNHNRIVVTDL-DGNFIVQIGSSGEE------GLRDGSFDDATFNRPQGLAYNAK 667
           LF++DS  + +    L DG     +G   +       G  DG   +A    P G+ ++ K
Sbjct: 156 LFVADSESSTVRTVSLKDGAVKHLVGGERDPMDLFAFGDVDGVGINAKLQHPLGVTWDKK 215

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +NL+YVAD+ NH ++ +D    T  TLAG G   +        T    N P  +C     
Sbjct: 216 RNLVYVADSYNHKIKVVDPKTKTCTTLAGTGDASNVIS--SSFTQSTFNEPGGLCIGENG 273

Query: 728 EKVYIAMAGQHQI 740
           + +Y+A    HQI
Sbjct: 274 QLLYVADTNNHQI 286



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D D     + L+ P  +  D   N ++++DS +++I V D        +  +
Sbjct: 186 PMDLFAFGDVDGVGINAKLQHPLGVTWDKKRNLVYVADSYNHKIKVVDPKTKTCTTLAGT 245

Query: 642 GE-EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           G+   +   SF  +TFN P GL       LLYVADT NH ++ +D     +  L
Sbjct: 246 GDASNVISSSFTQSTFNEPGGLCIGENGQLLYVADTNNHQIKVMDLETKMISVL 299


>gi|452822384|gb|EME29404.1| haloacid dehalogenase-like hydrolase family protein [Galdieria
           sulphuraria]
          Length = 679

 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 247/501 (49%), Gaps = 29/501 (5%)

Query: 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAV 510
           L  K++V+  W    I+    +  L+ +   Y  +   VV +H+ KFD E D   +R A+
Sbjct: 184 LDNKLLVVFLWRSSDISNPDYVRVLQRISVSYPQV--AVVAIHTPKFDYEIDSHFVRIAL 241

Query: 511 LRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570
             + ++ P   D D  +W+ +G   WPT  V+ PN  +L  +        L+D +  +L 
Sbjct: 242 EGFDMNFPCALDSDWQVWKSIGAKDWPTVLVLDPNYHILFAIPKNKFHL-LEDCITTSLD 300

Query: 571 FYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDL 630
           ++ +   +    +  +++   DP    SPL  PGK+A+D+ N RLFISDS H+RI++  +
Sbjct: 301 YFSEYPFVKGA-IAKTIKFSLDPMERASPLCSPGKIALDLKNGRLFISDSGHHRILIVTM 359

Query: 631 DGNFIVQIGSSGEE-----------GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679
           +G F+ QIG    E           G +DGSF++  F  PQG+ YN + + L +AD  N 
Sbjct: 360 EGQFLDQIGGLRVEDDFILSEKESMGWKDGSFEETRFRNPQGMIYNEEYDELVIADMWND 419

Query: 680 ALREIDFVNDTVRT--LAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ 737
           A+R        VRT  L         + G  + T      P DV        ++   AG 
Sbjct: 420 AIRIAHLKQRQVRTTVLHSKSIGVLSFSGTSECT---FRYPMDVTI--YENTIFAVAAGS 474

Query: 738 HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ---PSGISLSPDFMEIYVADSES 794
           ++IW  +   G  +   G+G   + +  +  + S A+   PSGI++SP+   +YV DS+S
Sbjct: 475 NEIWSLNP-SGEVKLVCGNGKYPSGHIDTEGDLSRARLCAPSGITVSPN-GTLYVVDSDS 532

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
           S IR L++       L GGD IF  NL  FGDR+G+ S V LQ P+G+      Q+ VAD
Sbjct: 533 SIIRWLSMTKNQVGTLVGGDAIFTGNLSAFGDRNGVSSSVRLQRPMGICYMDKDQLIVAD 592

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNN 913
           ++NHK+K +         L G  + G+ DG    A+   P  +  +  +  L+I D  N+
Sbjct: 593 TFNHKLKCIHTIQRDCRWLCGDSQLGYVDGPKTYAKFHCPCDVAWDPISQRLYIVDRENH 652

Query: 914 IIRYLDLNKEEPELQTLELKG 934
           +IR++D N     + TL+L G
Sbjct: 653 VIRWMDWNSNGI-VHTLQLFG 672


>gi|148908528|gb|ABR17375.1| unknown [Picea sitchensis]
          Length = 223

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/127 (85%), Positives = 118/127 (92%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           KV+AVLFDMDGVLCNSEE SR+AAVDVFAEMG+EVT EDF+PFMGTGEANFLGGVA VK 
Sbjct: 75  KVNAVLFDMDGVLCNSEEASRQAAVDVFAEMGIEVTTEDFIPFMGTGEANFLGGVARVKS 134

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
           VK FD  AAKKRFFEIYL KYA+PNSG+G+PG+LELI QCK+KGLKVAVASSADRIKV+A
Sbjct: 135 VKDFDPVAAKKRFFEIYLKKYARPNSGLGYPGSLELILQCKNKGLKVAVASSADRIKVNA 194

Query: 198 NLAAAGL 204
           NLAAAGL
Sbjct: 195 NLAAAGL 201


>gi|26362529|dbj|BAC25000.1| unnamed protein product [Mus musculus]
          Length = 454

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/442 (33%), Positives = 231/442 (52%), Gaps = 42/442 (9%)

Query: 651  FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
            F +++FN PQG+A     N++YVADTENH +R+ID   + V T+AG G +G+D +GGE+G
Sbjct: 2    FSESSFNSPQGVAI--ADNVIYVADTENHLIRKIDLEAEKVTTVAGVGIQGTDTEGGEEG 59

Query: 711  TSQLLNSPWDVCYKPI------NEKVYIAMAGQHQIW-----------EHSTVDGVTRAF 753
              Q ++SPWDV           N+ ++IAMAG HQIW           +     G    F
Sbjct: 60   DKQPISSPWDVALGTSGSEVQRNDILWIAMAGTHQIWALLLDSGTLPKKSDLKKGTCIRF 119

Query: 754  SGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLA 811
            +G G E N N +      FAQPSG++L+ +  +  ++VADSESS++R ++L+ G  + L 
Sbjct: 120  AGSGNEENRNNAYPHKAGFAQPSGLALASEEPWSCLFVADSESSTVRTVSLRDGAVKHLV 179

Query: 812  GG--DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASN 868
            GG  DP+   NLF FGD DG G    LQHPLGV   +  Q+ YVADSYNHKIK +DP + 
Sbjct: 180  GGERDPM---NLFAFGDVDGAGINAKLQHPLGVAWDEERQVLYVADSYNHKIKVVDPKTK 236

Query: 869  RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPEL 927
              +TLAG G A     +   +  +EP G+   ++G  L++ADTNN+ I+ +DL      +
Sbjct: 237  GCTTLAGTGDASDASSSFAESAFNEPGGLCIGESGRLLYVADTNNHQIKVMDLEARTVSV 296

Query: 928  ------QTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEY 981
                   +  + G  P   +   PK  +  +      + V  G + +  + LK+ LP   
Sbjct: 297  LPVCKSDSAVVDGSFPREKQKTVPKVPKSAAHIGLPPVTVHPGQALQ--LRLKLQLPPGA 354

Query: 982  HFSKEARSKFSVDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-STGRISCKV 1036
              ++ A S + ++ E    ++ +        N+S + +  L       S+ +   +   +
Sbjct: 355  KLTEGAPSCWFLEAEGNEWLLQEQTPSGDIENISNQPAISLQIPTHCLSLEAVVSVVVFL 414

Query: 1037 YYCKED-EVCLYKPLLFEVPFQ 1057
            YYC  D   C+ K ++F  P Q
Sbjct: 415  YYCSADSSACMMKGVVFRQPLQ 436



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 53/113 (46%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D D     + L+ P  +A D     L+++DS +++I V D        +  +
Sbjct: 185 PMNLFAFGDVDGAGINAKLQHPLGVAWDEERQVLYVADSYNHKIKVVDPKTKGCTTLAGT 244

Query: 642 GEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           G+      SF ++ FN P GL       LLYVADT NH ++ +D    TV  L
Sbjct: 245 GDASDASSSFAESAFNEPGGLCIGESGRLLYVADTNNHQIKVMDLEARTVSVL 297



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%)

Query: 615 LFISDSNHNRIVVTDL-DGNFIVQIGSSGEE------GLRDGSFDDATFNRPQGLAYNAK 667
           LF++DS  + +    L DG     +G   +       G  DG+  +A    P G+A++ +
Sbjct: 155 LFVADSESSTVRTVSLRDGAVKHLVGGERDPMNLFAFGDVDGAGINAKLQHPLGVAWDEE 214

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           + +LYVAD+ NH ++ +D       TLAG G   SD            N P  +C     
Sbjct: 215 RQVLYVADSYNHKIKVVDPKTKGCTTLAGTG-DASD--ASSSFAESAFNEPGGLCIGESG 271

Query: 728 EKVYIAMAGQHQI 740
             +Y+A    HQI
Sbjct: 272 RLLYVADTNNHQI 284


>gi|152968196|ref|YP_001363980.1| NHL repeat-containing protein [Kineococcus radiotolerans SRS30216]
 gi|151362713|gb|ABS05716.1| putative NHL repeat protein [Kineococcus radiotolerans SRS30216]
          Length = 584

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 236/526 (44%), Gaps = 82/526 (15%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W+  AP     DL G  V+LDFWT  C+NC+HVL +L    +++      VVGVHS KF 
Sbjct: 24  WVGPAP-----DLAGVPVLLDFWTGSCVNCVHVLAEL----REHVPPGLLVVGVHSPKFP 74

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
           +E    A+  AV R  + HPV++D D   W    V +WPT  +V   G ++A  +GEGH 
Sbjct: 75  HEASPGAVEAAVARLEVDHPVLDDADRTTWSAYAVKAWPTLVLVDAGGYVVATRSGEGHV 134

Query: 559 KDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFIS 618
            +L  L             +                    PL+FP +LA       L + 
Sbjct: 135 AELVALAADLPARPAPPAAVPAG---------------DGPLRFPARLA-RTAAGELLVV 178

Query: 619 DSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY------NAKKNLLY 672
           D+ H+R++V D        IG SG  G  DG     +F  PQG+A        A    L 
Sbjct: 179 DAGHHRLLVGDR------PIG-SGARGRTDGPA--PSFAAPQGVAVLPPDLAAALGYDLV 229

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           VADT NH LR +   +    T+AG G       GG    +  L+SPWDV + P   ++ +
Sbjct: 230 VADTGNHLLRGVRSADGRTTTIAGTGAPARGRSGGGPALATALSSPWDVAWWPAFGELLV 289

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS 792
           A+AG HQ+W    V    R  +G   E  L+G +      AQPSG+++  D   ++  D+
Sbjct: 290 AVAGTHQLWAFDPVAATVRVVAGTTAEGLLDGPAE-RAWLAQPSGLAVDGD--RLWFVDA 346

Query: 793 ESSSIRALNLKTGGSRL-----------LAGGDPI----------FPDNLFKFGDRDGMG 831
           E+SS+R+L      +RL           +A  DP+            + LF+FG +DG  
Sbjct: 347 ETSSLRSLRFPGDPARLDRSVPRTDDPRMANVDPVARPGGIVETAVGEGLFEFGAQDGEA 406

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
           +    QHPLG+     G + VADS+N  +++ DP +  V TL         DG      L
Sbjct: 407 AGARFQHPLGL-AVDGGTVLVADSFNGSLRRYDPVAGTVETL--------LDG------L 451

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQP 937
           +EP  ++      L +    + + R+       P+ + L    V+P
Sbjct: 452 AEPVDVLREGEDLLVVESAAHRVGRW---RVPVPDRRVLPAARVRP 494


>gi|21758510|dbj|BAC05316.1| unnamed protein product [Homo sapiens]
          Length = 440

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/431 (34%), Positives = 221/431 (51%), Gaps = 53/431 (12%)

Query: 669  NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728
            N++YVADTENH +R+ID   + V T+AG G +G+D +GG KG  Q ++SPWDV +     
Sbjct: 3    NIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTDKEGGAKGEQQPISSPWDVVFGTSGS 62

Query: 729  KV------YIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771
            +V      +IAMAG HQIW           ++    G    F+G G E N N +      
Sbjct: 63   EVQRGDILWIAMAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAG 122

Query: 772  FAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
            FAQPSG+SL+ +  +  ++VADSESS++R ++LK G  + L GG+   P NLF FGD DG
Sbjct: 123  FAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERD-PMNLFAFGDVDG 181

Query: 830  MGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA 888
            +G    LQHPLGV +  K   +YVADSYNHKIK +DP +   +TLAG G       ++  
Sbjct: 182  VGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFT 241

Query: 889  -AQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE----PELQT----------LEL 932
             +  +EP G+   +NG  L++ADTNN+ I+ +DL  +     P  ++          +E 
Sbjct: 242  ESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEK 301

Query: 933  KGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFS 992
            +   P  PKS    RL   ++   QT+             L++ LP     ++   S + 
Sbjct: 302  QKTLPKLPKSAPSIRLSPVTACAGQTL----------QFKLRLDLPSGSKLTEGVSSCWF 351

Query: 993  VDVEPENAVIIDPLDG----NLSPEGSAVLHFRRMSPSV-STGRISCKVYYCKED-EVCL 1046
            +  E    ++   +      N+S + +  L       S+ +   +S  +YYC  D   C+
Sbjct: 352  LTAEGNEWLLQGQIAAGDIENISSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACM 411

Query: 1047 YKPLLFEVPFQ 1057
             K +LF  P Q
Sbjct: 412  MKAILFSQPLQ 422



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 615 LFISDSNHNRIVVTDL-DGNFIVQIGSSGEE------GLRDGSFDDATFNRPQGLAYNAK 667
           LF++DS  + +    L DG     +G   +       G  DG   +A    P G+ ++ K
Sbjct: 140 LFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGVTWDKK 199

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +NLLYVAD+ NH ++ +D       TLAG G   ++       T    N P  +C     
Sbjct: 200 RNLLYVADSYNHKIKVVDPKTKNCTTLAGTGD--TNNVTSSSFTESTFNEPGGLCIGENG 257

Query: 728 EKVYIAMAGQHQI 740
           E +Y+A    HQI
Sbjct: 258 ELLYVADTNNHQI 270



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D D     + L+ P  +  D   N L+++DS +++I V D        +  +
Sbjct: 170 PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGT 229

Query: 642 GE-EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           G+   +   SF ++TFN P GL       LLYVADT NH ++ +D     V  L
Sbjct: 230 GDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVL 283



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF-KDGAALAAQ--LSEPAGII----- 898
           N  IYVAD+ NH I+K+D  + +VST+AGIG  G  K+G A   Q  +S P  ++     
Sbjct: 2   NNIIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTDKEGGAKGEQQPISSPWDVVFGTSG 61

Query: 899 -EAQNGN-LFIADTNNNIIRYLDLN 921
            E Q G+ L+IA    + I  L L+
Sbjct: 62  SEVQRGDILWIAMAGTHQIWALLLD 86


>gi|29830929|ref|NP_825563.1| hypothetical protein SAV_4386 [Streptomyces avermitilis MA-4680]
 gi|29608042|dbj|BAC72098.1| hypothetical protein SAV_4386 [Streptomyces avermitilis MA-4680]
          Length = 341

 Score =  216 bits (549), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 125/327 (38%), Positives = 186/327 (56%), Gaps = 24/327 (7%)

Query: 418 ISDVENRKTTPIVPEFPAKLDWLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           ++D   R+     PE   K  WLNT   Q+   DL+G++VVLDFWT+CCINC+HVL +L 
Sbjct: 1   MNDSAPRRVRVRAPELIGKGGWLNTGDKQYTLADLRGRIVVLDFWTFCCINCLHVLDELR 60

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
            LE+K++D    ++GVHS KF +E + +A+ +AV RYG+ HPV++D ++  W++  V +W
Sbjct: 61  ELEEKHRDT-VVIIGVHSPKFVHEAEHQAVVDAVERYGVEHPVLDDPELATWKQYAVRAW 119

Query: 537 PTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF 596
           PT  V+ P G ++AQ AGEGH   +  LV      +  K          +L + + P + 
Sbjct: 120 PTLVVIDPEGYVVAQHAGEGHAHAIAALVAELEAEHEAKG---------TLRRGDGPYVA 170

Query: 597 TSP----LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
             P    L+FPGK A+ + +    +SD+  +++V    DG  +V+   SG  G  DG  D
Sbjct: 171 PEPEPTVLRFPGK-ALLLPSGNFLVSDTTRHQLVELAADGESVVRRIGSGIRGFADGPAD 229

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEK 709
            A+F+ PQG+     ++++ VADT NHALR +D     V TLAG G    +GS   G  +
Sbjct: 230 AASFSEPQGMTL-LDEDVVVVADTVNHALRRLDLATGEVTTLAGTGRQWWQGSPASGPAR 288

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAG 736
                L+SPWDV       +V+IAMAG
Sbjct: 289 EVD--LSSPWDVAV--FGGRVWIAMAG 311



 Score = 50.1 bits (118), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           +L+ P       +G   V+D+  H++ +L      V    G G  GF DG A AA  SEP
Sbjct: 177 VLRFPGKALLLPSGNFLVSDTTRHQLVELAADGESVVRRIGSGIRGFADGPADAASFSEP 236

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ--PPTPKSRSPKRLRRRS 952
            G+       + +ADT N+ +R LDL     E+ TL   G Q    +P S  P R    S
Sbjct: 237 QGMTLLDEDVVVVADTVNHALRRLDL--ATGEVTTLAGTGRQWWQGSPAS-GPAREVDLS 293

Query: 953 SP 954
           SP
Sbjct: 294 SP 295



 Score = 41.2 bits (95), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-- 882
           G  DG         P G+       + VAD+ NH +++LD A+  V+TLAG G+  ++  
Sbjct: 222 GFADGPADAASFSEPQGMTLLDEDVVVVADTVNHALRRLDLATGEVTTLAGTGRQWWQGS 281

Query: 883 --DGAALAAQLSEP 894
              G A    LS P
Sbjct: 282 PASGPAREVDLSSP 295


>gi|238062013|ref|ZP_04606722.1| LOW QUALITY PROTEIN: alkyl hydroperoxide reductase/thiol specific
           antioxidant/Mal allergen [Micromonospora sp. ATCC 39149]
 gi|237883824|gb|EEP72652.1| LOW QUALITY PROTEIN: alkyl hydroperoxide reductase/thiol specific
           antioxidant/Mal allergen [Micromonospora sp. ATCC 39149]
          Length = 582

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 217/429 (50%), Gaps = 41/429 (9%)

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
             K+  A+  AV RYG+ HPV++D ++++W++    +WPT AV+ P G ++A +AGEGH 
Sbjct: 47  TRKNPAALAAAVERYGVRHPVLDDPELDMWQQYAARAWPTLAVIDPEGYVVATMAGEGHA 106

Query: 559 KDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFIS 618
           + L  LV+  +  +  K  L     P     + +     + L+FPGK AI +    L +S
Sbjct: 107 EGLARLVDELVATHEAKGTLHRGDGPYVPPAEPE-----TALRFPGK-AIALDGGNLLVS 160

Query: 619 DSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL-------AYNAKKNLL 671
           DS  + +V    DG  +V+   SG  G  DG    A F  PQGL       A  A  +++
Sbjct: 161 DSARHSLVELAPDGETLVRRIGSGVRGRADGPAGAAAFAEPQGLCRLPEHVAEVAGYDVV 220

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDY--QGGEKGTSQLLNSPWDVCYKPINEK 729
            VADT NH LR +      V T+AG G +             S  L+SPWD+ +   ++K
Sbjct: 221 -VADTVNHLLRGVRLATGEVVTVAGTGRQWRSTVDDHAHDSLSVDLSSPWDLAW--YDDK 277

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           V +AMAG HQ+W    +      ++G   E   +G  +     AQPSG+++S D   ++V
Sbjct: 278 VIVAMAGIHQLWWFDPIRRTAGMYAGTTVEALRDGPLA-EAWLAQPSGLAVSADGARLWV 336

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           ADSE+S++R +     G+ +  G        LF FG  DG     LLQHPLGV    +G 
Sbjct: 337 ADSETSAVRYVENGVLGTAVGQG--------LFDFGHVDGPADRALLQHPLGVCALPDGS 388

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           + +AD+YN  +++ DPA+  VST+AG               L+EP+ ++   +G + + +
Sbjct: 389 VLIADTYNGAVRRFDPATGLVSTVAG--------------GLAEPSDLVLTADGGVLVVE 434

Query: 910 TNNNIIRYL 918
           +  + +  L
Sbjct: 435 SAAHRLARL 443


>gi|452819912|gb|EME26962.1| phosphoglycolate phosphatase [Galdieria sulphuraria]
          Length = 248

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/219 (53%), Positives = 142/219 (64%), Gaps = 1/219 (0%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEM-GVEVTVEDFLPFMGTGEANFLGGVASVK 136
           K  AVLFDMDGVLC+SE  SR AA  +F++   V V  E F  F G GE  FL GVA + 
Sbjct: 23  KYDAVLFDMDGVLCDSEILSRLAAATMFSQYHNVRVKPEHFAAFTGQGEERFLSGVAEMY 82

Query: 137 GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
            V  FD   AK+RFF+IY+ +YA       +PG  +LI  CK  GL VAVASSADRIKV 
Sbjct: 83  NVPHFDPVIAKQRFFDIYISQYALSGKLHSYPGVKDLIAVCKKVGLFVAVASSADRIKVR 142

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
           ANL   GL   +FD IV +D  E  KP PDIFL A+K L V    C+VIEDA AG+QAAK
Sbjct: 143 ANLLGIGLDEQIFDYIVESDQIERKKPFPDIFLQAAKGLGVNPERCVVIEDATAGIQAAK 202

Query: 257 AAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDIL 295
            A MRCIAVTT+LS E+L    P +I++  G ++++DIL
Sbjct: 203 EAGMRCIAVTTSLSAEQLSSLYPDVIKEHPGLITISDIL 241


>gi|319786925|ref|YP_004146400.1| NHL repeat containing protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317465437|gb|ADV27169.1| NHL repeat containing protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 469

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/490 (31%), Positives = 240/490 (48%), Gaps = 46/490 (9%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           E PA LDWLN  P     DL+G+ VVL F       C   L +L   + +       +V 
Sbjct: 8   ELPAGLDWLNATPASLN-DLRGRPVVLAFVNAASAWCTQRLQELANWQARNPGRLHVLV- 65

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           +   +FD E+  +     + R+G + P + D D   W+  G+ SWPT  +V   G+   +
Sbjct: 66  LQVPRFDCERQPQRSLKLLRRHGNAFPALLDADWAAWQRYGIESWPTLLLVDAEGRERER 125

Query: 552 LAGEGHRKD--LDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
           + G     D  L  L E         +L++  P         +PRL    L+FP  +A  
Sbjct: 126 IVGLNGDLDRALSALAENVAPHPDGGRLVETVP---------EPRL---SLRFPSAVAAS 173

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
              +RLFI+DS H+RI+     G  + Q G    + + DG  D A FNRPQGLA   ++ 
Sbjct: 174 A--DRLFIADSGHHRILECTHSGRVLRQFGLGTADSM-DGPHDQAAFNRPQGLAL--ERE 228

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           +LYVADT NH+LR I+ +N TV TL GNG  G   +G   GT+  LN P  V       +
Sbjct: 229 VLYVADTGNHSLRRINLLNGTVDTLCGNGRAGDPLEGPVAGTNTSLNHP--VSLAIAANQ 286

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           V+IA AG +++W +    G     +G G     +G++    +FAQP+G++     +  YV
Sbjct: 287 VHIACAGDNRLWSYDLGRGELSLRAGTGRLEMRDGNARTIAAFAQPTGLAAVQQVL--YV 344

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
            D+  S+IR+L L++   + L G        ++ FGD DG  +   LQHPLG+  + +  
Sbjct: 345 CDALGSAIRSLQLRSDLVQTLVG------QGMWDFGDADGPRASARLQHPLGIALSADAP 398

Query: 850 -IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
            +++ADS N  ++ L      ++T+            +L  +L  P G+  A  G ++IA
Sbjct: 399 LLWIADSGNGSLRTLRLGGGELTTV------------SLPRRLHGPTGLAIA-GGAVWIA 445

Query: 909 DTN-NNIIRY 917
           +T+ + ++RY
Sbjct: 446 ETDAHAVLRY 455


>gi|285018581|ref|YP_003376292.1| nhl repeat protein [Xanthomonas albilineans GPE PC73]
 gi|283473799|emb|CBA16302.1| hypothetical nhl repeat protein [Xanthomonas albilineans GPE PC73]
          Length = 473

 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/494 (31%), Positives = 239/494 (48%), Gaps = 39/494 (7%)

Query: 433 FPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGV 492
            P+   WLN AP   R   +G+ +VL F     + CM  L ++     +       +V V
Sbjct: 9   LPSSSVWLNVAPTALREQ-QGRAIVLAFVNAASVWCMQRLAEVSHWHVRNPGRLQMIV-V 66

Query: 493 HSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQL 552
              +FDNE++ +     + R G+S P+V D D  +W+   + SWPT  ++   G    +L
Sbjct: 67  QVPRFDNEREPQGALKLLRRQGVSAPIVLDADWAIWQRFNIQSWPTLVLLDAAGFERERL 126

Query: 553 AGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILN 612
            G G   +LD  + A      ++ L  +  LP   E   +PRL    L+FP  LA  +  
Sbjct: 127 VGIGG-AELDKALHA---LCAEQPLSLDDELPEVPETQPEPRLM---LRFPSGLA--LYE 177

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLY 672
           +RL+I+DS H+RI+  +  G  + Q G +G     DG    A F+RPQGLA   ++ +LY
Sbjct: 178 DRLYIADSGHHRILECNTGGRLLRQFG-TGTADFIDGELGQAAFHRPQGLAL--QRGVLY 234

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYKPINEKVY 731
           VADT NHALR I  +   V TL GNG  G   +G  E+     LN P D+     + +VY
Sbjct: 235 VADTGNHALRRIHLLTGQVDTLCGNGRAGEPVEGLVEQPLLVSLNHPQDLVVA--DNQVY 292

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           +AMAG + IW ++      R  +G G     +GS+ L  +FAQP  +++    M  YV D
Sbjct: 293 LAMAGDNCIWSYNLGSRSLRRCAGAGTLELRDGSAHL-AAFAQPCSLAVVNQVM--YVCD 349

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QI 850
           +  SS+R++ L+    + L GG  +     + FG  DG  S   LQ P  +  + +   +
Sbjct: 350 ALGSSVRSMQLRGDLVQTLLGGQGV-----WDFGHEDGPRSRARLQFPQAIALSPDALHL 404

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT 910
           ++ADS N  ++ L      +ST+            AL  +L  PAG +    G ++IA+ 
Sbjct: 405 WIADSGNGSLRSLRLGGGELSTV------------ALPRRLHGPAG-LAVSAGAVWIAEA 451

Query: 911 NNNIIRYLDLNKEE 924
           + + +   DL   E
Sbjct: 452 DAHAVLRYDLGSGE 465


>gi|380511998|ref|ZP_09855405.1| nhl repeat protein [Xanthomonas sacchari NCPPB 4393]
          Length = 473

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 151/495 (30%), Positives = 241/495 (48%), Gaps = 52/495 (10%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           E PA   WLN  P++ R DL+G+ +VL F     + C   L +L   + +       V+ 
Sbjct: 8   ELPASGAWLNAEPIRLR-DLQGRALVLAFVNAASVWCAQRLAELGQWQARNPGR-LQVIV 65

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           V   +FD+E++ +     +   G+S P++ D D   W+   + +WPT  ++   G    +
Sbjct: 66  VQVPRFDSEREPQRALKLLRSQGVSAPILLDADWAAWQRFDIQAWPTLVLIDAGGVERER 125

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL------SLEKDNDPRLFTSPLKFPGK 605
           L G G   +LD  + A         L    PLPL      + E   +PRL   PL+FP  
Sbjct: 126 LVGIGG-AELDKALHA---------LCAGQPLPLDEDLRDARETQPEPRL---PLRFPTG 172

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
           L +   ++ L+++DS H+RI+    +G  + Q G  G     DG+  +A F+RP+GLA  
Sbjct: 173 LVV--ADDLLYVADSGHHRILECSTNGRVLRQFGI-GTADFIDGAIGEAAFHRPRGLAL- 228

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG-EKGTSQLLNSPWDVCYK 724
            ++ +LYVADT NHALR I+ +   V TL GNG  G   +G  E+     LN P DV   
Sbjct: 229 -ERGVLYVADTGNHALRRINLLTGQVDTLCGNGRAGEPVEGRVEQPLLAPLNHPQDVVIA 287

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
             + +V++AMAG ++IW +       R  +G G     +GS  L  +FAQP   SL+   
Sbjct: 288 --DNQVHLAMAGDNRIWSYDLGSRSLRWRAGAGALELRDGSGHL-AAFAQPC--SLAAVQ 342

Query: 785 MEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
             +YV D+  S++R++ L+    + L GG        + FG+ DG  S   LQ P  +  
Sbjct: 343 QVLYVCDALGSAVRSMQLRGDLVQTLLGG-----QGPWDFGNEDGPRSRARLQFPQAIAL 397

Query: 845 AKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
           + +   +++ADS N  ++ L      +ST            A L  +L  P G +    G
Sbjct: 398 SPDAPLLWIADSGNGSLRSLRLGGGELST------------AVLPRRLHGPGG-LAVSAG 444

Query: 904 NLFIADTN-NNIIRY 917
            ++IA+T+ + ++RY
Sbjct: 445 TVWIAETDAHAVLRY 459


>gi|449019935|dbj|BAM83337.1| unknown phosphatase CbbY [Cyanidioschyzon merolae strain 10D]
          Length = 324

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/218 (50%), Positives = 139/218 (63%), Gaps = 3/218 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEM-GVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           + AV+FDMDGVLC+SE  SR A V+ F    GV  T +DF  F GTGEA FL GVA    
Sbjct: 93  LRAVIFDMDGVLCDSERLSRAAGVEYFRRYHGVWPTEKDFADFAGTGEAAFLSGVARRYS 152

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
           VK FD   AK+ FF IY+++Y        F G  E I Q K+ GLK A+ASSAD IKV A
Sbjct: 153 VKDFDVNKAKEGFFNIYVNEYVSALEP--FEGVREFIQQIKTMGLKTALASSADAIKVHA 210

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
           NL+A G    MFD +  +D   N KPAPDIFL+A++ L VP   C+VIEDA AGV AAK 
Sbjct: 211 NLSAIGFERDMFDFVTRSDEIANKKPAPDIFLAAAEGLGVPPESCVVIEDAPAGVLAAKR 270

Query: 258 AQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDIL 295
           A+MRC+AV T++S + L +A   ++R     + L+DI+
Sbjct: 271 ARMRCVAVATSVSAQLLWDAGADIVRPAPQYIMLDDIV 308


>gi|384428019|ref|YP_005637378.1| hypothetical protein XCR_2380 [Xanthomonas campestris pv. raphani
           756C]
 gi|341937121|gb|AEL07260.1| conserved hypothetical protein [Xanthomonas campestris pv. raphani
           756C]
          Length = 472

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 156/498 (31%), Positives = 240/498 (48%), Gaps = 43/498 (8%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + +   
Sbjct: 4   QLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARSPG 59

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++  
Sbjct: 60  R-LQVIVVQVPRFDSERMPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLLDA 118

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
            G+   +L G     DLD  + A  L  G++   D   L    E+D +PRL    L+FP 
Sbjct: 119 YGRERQRLVGV--TGDLDKALAA--LCEGQQPPSD-ADLHGVAERDPEPRL---ALRFPT 170

Query: 605 KLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
            LA     +RL+I+D+ H+RI+     G  + Q G  G   L DG   +A F RPQGLA 
Sbjct: 171 GLAAT--EDRLYIADTGHHRILECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGLAL 227

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT-SQLLNSPWDVCY 723
             ++  LYVADT NHALR I+  +  V TL G G  G   +G    T +  LN P  +  
Sbjct: 228 --EREELYVADTGNHALRRINLRSGQVDTLCGTGRSGEPIEGPLASTGASPLNYPQGLAV 285

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
              + ++ IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++    
Sbjct: 286 A--DNQLLIAMAGDNRIWSYHLGRAALSARAGTGSLEIRDGSGHL-AAFAQPAGLAAVQQ 342

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
               YV D   SSIR + L+    + L GG        ++FG+ DG  S   LQ P  + 
Sbjct: 343 VA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGEDDGPRSTARLQFPQAIA 395

Query: 844 CAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
            A +   ++VAD+ N +++ L      ++T+            AL  +L  PAG+  A  
Sbjct: 396 LAADSPMLWVADTGNGRLRCLRLGGGELTTV------------ALPRRLHGPAGLAVA-G 442

Query: 903 GNLFIADTNNNIIRYLDL 920
           G ++IA+T+ + +   DL
Sbjct: 443 GAVWIAETDAHAVLRYDL 460


>gi|190573634|ref|YP_001971479.1| hypothetical protein Smlt1644 [Stenotrophomonas maltophilia K279a]
 gi|190011556|emb|CAQ45175.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 470

 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 237/492 (48%), Gaps = 42/492 (8%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           VP+ P    WLN AP     +L+G+ V L F           L +      ++  M   +
Sbjct: 6   VPDLPEFATWLNAAPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFSQWLSRHPGMLQPL 64

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           V +   +FD E+D  A    + R G+S PV+ D D + WR  G+ SWPT  ++   G+  
Sbjct: 65  V-LQVPRFDFERDAGAALKLLRRQGLSMPVLLDADWDGWRRFGITSWPTVVLLDAQGREQ 123

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            +L G G   DL+  + A  L +G      + P     E   +PR     L+FP  LA+ 
Sbjct: 124 QRLVGLGAPGDLERALNA--LCHGAP----SAPPRGGTELHPEPR---QALRFPLGLAVS 174

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
               RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    +++
Sbjct: 175 --TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--ERD 229

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPINE 728
            LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  V     + 
Sbjct: 230 ALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP--VGLAIADN 287

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    +  Y
Sbjct: 288 QLHIAMAGDNRIWSYHLGQRSLQWRAGSGAIDERDGSGHL-AAFAQPTALAVVQQVL--Y 344

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           VAD+  SSIRAL L+    + L G  P      ++FGD DG  ++  LQ P  +  + + 
Sbjct: 345 VADALGSSIRALQLRGDLVQTLVGQGP------WRFGDEDGPRAQASLQFPQAIALSPDA 398

Query: 849 Q-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +++AD+ N +++ L      ++T              L  +L  PAG +    G ++I
Sbjct: 399 PLLWIADTGNGRLRTLRLGGGELTT------------QPLPRRLHGPAG-LAVGAGAVWI 445

Query: 908 ADTNNNIIRYLD 919
           A+T+ + I   D
Sbjct: 446 AETDAHAILRFD 457



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P GLA + ++  LY+AD+ +H + E       +R   G GT  +D+  G    +   + P
Sbjct: 168 PLGLAVSTER--LYIADSGHHRILECSHGGRILRQF-GLGT--ADFMDGNLAEAAF-HRP 221

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNG--SSSLNTSFAQP 775
             +  +   + +Y+A  G H +   + + G+     G+G     + G  + +   S   P
Sbjct: 222 QALVLE--RDALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP 279

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            G++++ +  ++++A +  + I + +L     +  AG   I         +RDG G    
Sbjct: 280 VGLAIADN--QLHIAMAGDNRIWSYHLGQRSLQWRAGSGAI--------DERDGSGHLAA 329

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSE 893
              P  +   +   +YVAD+    I+ L    + V TL G G  + G +DG    A L  
Sbjct: 330 FAQPTALAVVQQ-VLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGDEDGPRAQASLQF 388

Query: 894 PAGIIEAQNGNL-FIADTNNNIIRYLDLNKEEPELQTL 930
           P  I  + +  L +IADT N  +R L L   E   Q L
Sbjct: 389 PQAIALSPDAPLLWIADTGNGRLRTLRLGGGELTTQPL 426



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ PLG+  +   ++Y+ADS +H+I +      R+    G+G A F DG    A    P 
Sbjct: 165 LRFPLGLAVSTE-RLYIADSGHHRILECS-HGGRILRQFGLGTADFMDGNLAEAAFHRPQ 222

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++  ++  L++ADT N+ +R ++L
Sbjct: 223 ALVLERDA-LYVADTGNHAVRRINL 246


>gi|21231560|ref|NP_637477.1| hypothetical protein XCC2116 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768320|ref|YP_243082.1| hypothetical protein XC_1999 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21113245|gb|AAM41401.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573652|gb|AAY49062.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 499

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 240/499 (48%), Gaps = 45/499 (9%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + +   
Sbjct: 31  QLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELARWQARSPG 86

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++  
Sbjct: 87  R-LQVIVVQVPRFDSERMPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLLDA 145

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
            G+   +L G     DLD  + A  L  G++   D   L    E+D +PRL    L+FP 
Sbjct: 146 YGRERQRLVGV--TGDLDKALAA--LCEGQQPPSD-ADLHGVAERDPEPRL---ALRFPT 197

Query: 605 KLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
            LA     +RL+I+D+ H+RI+     G  + Q G  G   L DG   +A F RPQGLA 
Sbjct: 198 GLAAT--EDRLYIADTGHHRILECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGLAL 254

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWDVC 722
             ++  LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  + 
Sbjct: 255 --EREELYVADTGNHALRRINLRSGQVDTLCGTGRSGEPIEGPLASAGASP-LNYPQGLA 311

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               + ++ IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++   
Sbjct: 312 VA--DNQLLIAMAGDNRIWSYHLGRAALSARAGTGSLEIRDGSGHL-AAFAQPAGLAAVQ 368

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
                YV D   SSIR + L+    + L GG        ++FG+ DG  S   LQ P  +
Sbjct: 369 QVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGEDDGPRSAARLQFPQAI 421

Query: 843 YCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
             A +   ++VAD+ N +++ L      ++T+            AL  +L  PAG+  A 
Sbjct: 422 ALAADSPMLWVADTGNGRLRCLRLGGGELTTV------------ALPRRLHGPAGLAVA- 468

Query: 902 NGNLFIADTNNNIIRYLDL 920
            G ++IA+T+ + +   DL
Sbjct: 469 GGAVWIAETDAHAVLRYDL 487


>gi|440733650|ref|ZP_20913345.1| nhl repeat protein [Xanthomonas translucens DAR61454]
 gi|440359672|gb|ELP96967.1| nhl repeat protein [Xanthomonas translucens DAR61454]
          Length = 473

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 154/489 (31%), Positives = 240/489 (49%), Gaps = 40/489 (8%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           E P    WLN AP   R + +G+ +VL F     + C   L +L   + +       ++ 
Sbjct: 8   ELPQPGIWLNAAPTTLR-EQQGRALVLAFVNAASVWCAQRLGELAQWQARNPGR-LQLIV 65

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           V   +FD+E++ +     +   G+S P++ D D   W+   V +WPT  ++   G    +
Sbjct: 66  VQVPRFDSEREPQRALKLLRSQGVSAPILLDADWAAWQRFAVQAWPTLVLLDAGGYERER 125

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDIL 611
           L G G   DL+  + A  L  G+   LD   L  + E   +PRL    L+FP  LA+   
Sbjct: 126 LVGIGG-ADLEKALNA--LCAGQSLPLDEE-LRDARETQPEPRL---SLRFPFGLAL--A 176

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           ++RL+I+DS H+RIV     G  + Q G  G     DG   +A F+RP+GLA   ++ +L
Sbjct: 177 DDRLYIADSGHHRIVECTSGGRMLRQFGL-GTADFIDGGIGEAAFHRPRGLAL--ERGVL 233

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPINEKV 730
           YVADT NHALR I+ ++  V TL GNG  G   +G  +   Q  LN P DV     + +V
Sbjct: 234 YVADTGNHALRRINLLSGHVDTLCGNGRAGEPVEGPVQHPQQAPLNHPQDVVVA--DNQV 291

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           +IAMAG ++IW +   +   R  +G G     +GS  L  +FAQP   SL+     +YV 
Sbjct: 292 HIAMAGDNRIWSYELGNRSLRWRAGAGALELRDGSGHL-AAFAQPC--SLAAVQQALYVC 348

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ- 849
           D+  S++R+L L+    + L GG        + FG+ DG  S   LQ P  +  + +   
Sbjct: 349 DALGSAVRSLQLRGDLVQTLLGG-----QGPWDFGNEDGPRSRARLQFPQAIALSPDAPL 403

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           +++ADS N  ++ L      +ST              L  +L  PAG +    G ++IA+
Sbjct: 404 LWIADSGNGSLRSLRLGGGDLST------------TPLPRRLHGPAG-LAVSAGTVWIAE 450

Query: 910 TN-NNIIRY 917
           T+ + ++RY
Sbjct: 451 TDAHAVLRY 459


>gi|424667903|ref|ZP_18104928.1| hypothetical protein A1OC_01487 [Stenotrophomonas maltophilia
           Ab55555]
 gi|401068165|gb|EJP76689.1| hypothetical protein A1OC_01487 [Stenotrophomonas maltophilia
           Ab55555]
          Length = 470

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 237/492 (48%), Gaps = 42/492 (8%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           VP+ P    WLN AP     +L+G+ V L F           L +      ++  M   +
Sbjct: 6   VPDLPEFATWLNAAPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFSQWLSRHPGMLQPL 64

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           V +   +FD E+D  A    + R G+S PV+ D D + WR  G+ SWPT  ++   G+  
Sbjct: 65  V-LQVPRFDFERDAGAALKLLRRQGLSMPVLLDADWDGWRRFGITSWPTVVLLDAQGREQ 123

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            +L G G   +L+  + A  L +G      + P     E   +PR     L+FP  LA+ 
Sbjct: 124 QRLVGLGAPGELERALNA--LCHGAP----SAPPRGGTELHPEPR---QALRFPLGLAVS 174

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
               RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    +++
Sbjct: 175 --TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--ERD 229

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPINE 728
            LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  V     + 
Sbjct: 230 ALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP--VGLAIADN 287

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    +  Y
Sbjct: 288 QLHIAMAGDNRIWSYHLGQRSLQWRAGSGAIDERDGSGHL-AAFAQPTALAVVQQVL--Y 344

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           VAD+  SSIRAL L+    + L G  P      ++FGD DG  ++  LQ P  +  + + 
Sbjct: 345 VADALGSSIRALQLRGDLVQTLVGQGP------WRFGDEDGPRAQASLQFPQAIALSPDA 398

Query: 849 Q-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +++AD+ N +++ L      ++T              L  +L  PAG +    G ++I
Sbjct: 399 PLLWIADTGNGRLRTLRLGGGELTT------------QPLPRRLHGPAG-LAVGAGAVWI 445

Query: 908 ADTNNNIIRYLD 919
           A+T+ + I   D
Sbjct: 446 AETDAHAILRFD 457



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P GLA + ++  LY+AD+ +H + E       +R   G GT  +D+  G    +   + P
Sbjct: 168 PLGLAVSTER--LYIADSGHHRILECSHGGRILRQF-GLGT--ADFMDGNLAEAAF-HRP 221

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNG--SSSLNTSFAQP 775
             +  +   + +Y+A  G H +   + + G+     G+G     + G  + +   S   P
Sbjct: 222 QALVLE--RDALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP 279

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            G++++ +  ++++A +  + I + +L     +  AG   I         +RDG G    
Sbjct: 280 VGLAIADN--QLHIAMAGDNRIWSYHLGQRSLQWRAGSGAI--------DERDGSGHLAA 329

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSE 893
              P  +   +   +YVAD+    I+ L    + V TL G G  + G +DG    A L  
Sbjct: 330 FAQPTALAVVQQ-VLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGDEDGPRAQASLQF 388

Query: 894 PAGIIEAQNGNL-FIADTNNNIIRYLDLNKEEPELQTL 930
           P  I  + +  L +IADT N  +R L L   E   Q L
Sbjct: 389 PQAIALSPDAPLLWIADTGNGRLRTLRLGGGELTTQPL 426



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ PLG+  +   ++Y+ADS +H+I +      R+    G+G A F DG    A    P 
Sbjct: 165 LRFPLGLAVSTE-RLYIADSGHHRILECS-HGGRILRQFGLGTADFMDGNLAEAAFHRPQ 222

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++  ++  L++ADT N+ +R ++L
Sbjct: 223 ALVLERDA-LYVADTGNHAVRRINL 246


>gi|346725095|ref|YP_004851764.1| Thiol-disulfide isomerase and thioredoxin [Xanthomonas axonopodis
           pv. citrumelo F1]
 gi|418518756|ref|ZP_13084891.1| Thiol-disulfide isomerase and thioredoxin [Xanthomonas axonopodis
           pv. malvacearum str. GSPB1386]
 gi|346649842|gb|AEO42466.1| Thiol-disulfide isomerase and thioredoxin [Xanthomonas axonopodis
           pv. citrumelo F1]
 gi|410702450|gb|EKQ60955.1| Thiol-disulfide isomerase and thioredoxin [Xanthomonas axonopodis
           pv. malvacearum str. GSPB1386]
          Length = 472

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 241/501 (48%), Gaps = 45/501 (8%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D   L    E++ +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSD-ADLHGVAEREPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASPGASA-LNYPQG 282

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 283 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALEIRDGSGHL-AAFAQPAGLAS 339

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 340 VQQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 392

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
            +  A +   +++AD+ N +++ L      ++T+            AL  +L  PAG + 
Sbjct: 393 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTV------------ALPRRLHGPAG-LA 439

Query: 900 AQNGNLFIADTNNNIIRYLDL 920
              G ++IA+T+ + I   DL
Sbjct: 440 VTAGAVWIAETDAHAILRYDL 460


>gi|188991459|ref|YP_001903469.1| hypothetical protein xccb100_2064 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733219|emb|CAP51417.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 481

 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 239/499 (47%), Gaps = 45/499 (9%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + +   
Sbjct: 13  QLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARSPG 68

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++  
Sbjct: 69  R-LQVIVVQVPRFDSERMPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLLDA 127

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
            G+   +L G     DLD  + A  L  G+    D   L    E+D +PRL    L+FP 
Sbjct: 128 YGRERQRLVGV--TGDLDKALAA--LCEGQPPPSD-ADLHGVAERDPEPRL---ALRFPT 179

Query: 605 KLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
            LA     +RL+I+D+ H+RI+     G  + Q G  G   L DG   +A F RPQGLA 
Sbjct: 180 GLAAT--EDRLYIADTGHHRILECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGLAL 236

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWDVC 722
             ++  LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  + 
Sbjct: 237 --EREELYVADTGNHALRRINLRSGQVDTLCGTGRSGEPIEGPLASAGASP-LNYPQGLA 293

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               + ++ IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++   
Sbjct: 294 VA--DNQLLIAMAGDNRIWSYHLGRAALSARAGTGSLEIRDGSGHL-AAFAQPAGLAAVQ 350

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
                YV D   SSIR + L+    + L GG        ++FG+ DG  S   LQ P  +
Sbjct: 351 QVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGEDDGPRSTARLQFPQAI 403

Query: 843 YCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
             A +   ++VAD+ N +++ L      ++T+            AL  +L  PAG+  A 
Sbjct: 404 ALAADSPMLWVADTGNGRLRCLRLGGGELTTV------------ALPRRLHGPAGLAVA- 450

Query: 902 NGNLFIADTNNNIIRYLDL 920
            G ++IA+T+ + +   DL
Sbjct: 451 GGAVWIAETDAHAVLRYDL 469


>gi|456733989|gb|EMF58811.1| Hypothetical protein EPM1_4079 [Stenotrophomonas maltophilia EPM1]
          Length = 470

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 237/492 (48%), Gaps = 42/492 (8%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           VP+ P    WLN AP     +L+G+ V L F           L +      ++  M   +
Sbjct: 6   VPDLPEFATWLNAAPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFSQWLSRHPGMLQPL 64

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           V +   +FD E+D  A    + R G+S PV+ D D + WR  G+ SWPT  ++   G+  
Sbjct: 65  V-LQVPRFDFERDAGAALKLLRRQGLSMPVLLDADWDGWRRFGITSWPTVVLLDAQGREQ 123

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
            +L G G   +L+  + A  L +G      + P     E   +PR     L+FP  LA+ 
Sbjct: 124 QRLVGLGAPGELERALNA--LCHGAP----SAPPRGGTELHPEPR---QALRFPLGLAVS 174

Query: 610 ILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
               RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    +++
Sbjct: 175 --TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--ERD 229

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPINE 728
            LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  V     + 
Sbjct: 230 ALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP--VGLAIADN 287

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    +  Y
Sbjct: 288 QLHIAMAGDNRIWSYHLGQRSLQWRAGSGAIDERDGSGHL-AAFAQPTALAVVQQVL--Y 344

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           VAD+  SSIRAL L+    + L G  P      ++FGD DG  ++  LQ P  +  + + 
Sbjct: 345 VADALGSSIRALQLRGDLVQTLVGQGP------WRFGDEDGPRAQASLQFPQAIALSPDA 398

Query: 849 Q-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI 907
             +++AD+ N +++ L      ++T              L  +L  PAG +    G ++I
Sbjct: 399 PLLWIADTGNGRLRTLRLGGGELTT------------QPLPRRLHGPAG-LAVGAGAVWI 445

Query: 908 ADTNNNIIRYLD 919
           A+T+ + +   D
Sbjct: 446 AETDAHAVLRFD 457



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P GLA + ++  LY+AD+ +H + E       +R   G GT  +D+  G    +   + P
Sbjct: 168 PLGLAVSTER--LYIADSGHHRILECSHGGRILRQF-GLGT--ADFMDGNLAEAAF-HRP 221

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNG--SSSLNTSFAQP 775
             +  +   + +Y+A  G H +   + + G+     G+G     + G  + +   S   P
Sbjct: 222 QALVLE--RDALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP 279

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            G++++ +  ++++A +  + I + +L     +  AG   I         +RDG G    
Sbjct: 280 VGLAIADN--QLHIAMAGDNRIWSYHLGQRSLQWRAGSGAI--------DERDGSGHLAA 329

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSE 893
              P  +   +   +YVAD+    I+ L    + V TL G G  + G +DG    A L  
Sbjct: 330 FAQPTALAVVQQ-VLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGDEDGPRAQASLQF 388

Query: 894 PAGIIEAQNGNL-FIADTNNNIIRYLDLNKEEPELQTL 930
           P  I  + +  L +IADT N  +R L L   E   Q L
Sbjct: 389 PQAIALSPDAPLLWIADTGNGRLRTLRLGGGELTTQPL 426



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ PLG+  +   ++Y+ADS +H+I +      R+    G+G A F DG    A    P 
Sbjct: 165 LRFPLGLAVSTE-RLYIADSGHHRILECS-HGGRILRQFGLGTADFMDGNLAEAAFHRPQ 222

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++  ++  L++ADT N+ +R ++L
Sbjct: 223 ALVLERDA-LYVADTGNHAVRRINL 246


>gi|433676068|ref|ZP_20508221.1| RING finger protein nhl-1 [Xanthomonas translucens pv. translucens
           DSM 18974]
 gi|430818813|emb|CCP38486.1| RING finger protein nhl-1 [Xanthomonas translucens pv. translucens
           DSM 18974]
          Length = 473

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 240/495 (48%), Gaps = 39/495 (7%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           E P    WLN AP   R + +G+ +VL F     + C   L +L   + +       ++ 
Sbjct: 8   ELPQPGIWLNAAPTTLR-EQQGRALVLAFVNAASVWCAQRLGELAQWQARNPGR-LQLIV 65

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           V   +FD+E++ +     +   G+S P++ D D   W+   V +WPT  ++   G    +
Sbjct: 66  VQVPRFDSEREPQRALKLLRSQGVSAPILLDADWAAWQRFAVQAWPTLVLLDAGGYERER 125

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDIL 611
           L G G   DL+  + A  L  G+   LD   L  + E   +PRL    L+FP  LA+   
Sbjct: 126 LVGIGG-ADLEKALNA--LCAGQSLPLDEE-LRDARETQPEPRL---SLRFPFGLAL--A 176

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           ++RL+I+DS H+RIV     G  + Q G  G     DG   +A F+RP+GLA   ++ +L
Sbjct: 177 DDRLYIADSGHHRIVECTSGGRMLRQFGL-GTADFIDGGIGEAAFHRPRGLAL--ERGVL 233

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPINEKV 730
           YVADT NHALR I+ ++  V TL GNG  G   +G  +   Q  LN P DV     + +V
Sbjct: 234 YVADTGNHALRRINLLSGHVDTLCGNGRAGEPVEGPVQHPQQAPLNHPQDVVVA--DNQV 291

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           +IAMAG ++IW +   +   R  +G G     +GS  L  +FAQP   S++     +YV 
Sbjct: 292 HIAMAGDNRIWSYELGNRSLRWRAGAGALELRDGSGHL-AAFAQPC--SVAAVQQALYVC 348

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ- 849
           D+  S++R+L L+    + L GG        + FG+ DG  S   LQ P  +  + +   
Sbjct: 349 DALGSAVRSLQLRGDLVQTLLGG-----QGPWDFGNEDGPRSRARLQFPQAIALSPDAPL 403

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           +++ADS N  ++ L      +ST              L  +L  PAG +    G ++IA+
Sbjct: 404 LWIADSGNGSLRSLRLGGGDLST------------TPLPRRLHGPAG-LAVSAGTVWIAE 450

Query: 910 TNNNIIRYLDLNKEE 924
           T+ + +   D+   E
Sbjct: 451 TDAHAVLRYDIASGE 465


>gi|357417484|ref|YP_004930504.1| NHL repeat containing protein [Pseudoxanthomonas spadix BD-a59]
 gi|355335062|gb|AER56463.1| NHL repeat containing protein [Pseudoxanthomonas spadix BD-a59]
          Length = 474

 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 246/498 (49%), Gaps = 43/498 (8%)

Query: 427 TPI-VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM 485
           TP+  P+FP  L WLN AP + R  L+G VV L F       CM  L DL  LE++Y+  
Sbjct: 4   TPLHAPDFPHGLHWLNAAPTELR-SLQGSVVALAFVDPASAWCMQRLADLAVLERRYRGR 62

Query: 486 PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPN 545
              V  +   +FD  +D  A    + R+G+S PV +D D + W+   + SWPT  ++  +
Sbjct: 63  -LQVRILAQPRFDAHRDPLATLKRLRRHGVSLPVAHDRDWHAWQRFNIESWPTVVLIDAH 121

Query: 546 GKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGK 605
           G L  ++ G      L+  V A       +++L+      ++E + +PR   +PL+FP  
Sbjct: 122 GMLADRIVGTPGVGALEAAVSALC-----EQVLEPPGTTRAVETNPEPR---APLRFPTG 173

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
           L +     RL+++D+ H++I+     G  + + G+   + L DG  + A+F RP GL+  
Sbjct: 174 LVVTA--ERLYVADTGHHQILECTHAGRVLRRFGNGTADAL-DGEPEIASFCRPNGLSLL 230

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
            ++  LYVADT NH LR I+  +  V+T+ GN    +  +G  + + Q ++ P       
Sbjct: 231 REE--LYVADTGNHLLRRINLRSGAVQTVLGNRLTRTPAEGPIQ-SLQDVSLPSPTALVA 287

Query: 726 INEKVYIAMAGQHQI--WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
            N  +++ +AG ++I  W  S   G+    +G G     +G+  L  SFAQPSG  L+  
Sbjct: 288 GNSYLHLTLAGDNRIWTWNQSAGLGILECRAGSGQLGQRDGAGIL-ASFAQPSG--LAQV 344

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              +YVAD+  SSIR + L+   ++ L G        +++FGD DG   +  LQ P  + 
Sbjct: 345 QQALYVADTLGSSIRGVQLRGDLTQTLVG------QGMWEFGDADGQRQQARLQAPEALA 398

Query: 844 CAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
              +   +++AD+ N  I+ L      V+ L                +L+ PAG + A  
Sbjct: 399 LDPDAPLLWIADTGNGCIRSLRLGGGVVTRLD-------------LRKLAGPAG-VAAFG 444

Query: 903 GNLFIADTNNNIIRYLDL 920
           G L+I +T+ + +  LDL
Sbjct: 445 GKLWICETDAHAVLCLDL 462


>gi|78047814|ref|YP_363989.1| hypothetical protein XCV2258 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036244|emb|CAJ23935.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 499

 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 240/501 (47%), Gaps = 45/501 (8%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 29  NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 84

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 85  PGR-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 143

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D   L    E++ +P L    L+F
Sbjct: 144 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSD-ADLHGVAEREPEPHL---ALRF 195

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G     DG   +A F RPQGL
Sbjct: 196 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADFIDGGVGEAAFRRPQGL 252

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 253 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASPGASA-LNYPQG 309

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 310 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALEIRDGSGHL-AAFAQPAGLAS 366

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 367 VQQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 419

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
            +  A +   +++AD+ N +++ L      ++T+            AL  +L  PAG + 
Sbjct: 420 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTV------------ALPRRLHGPAG-LA 466

Query: 900 AQNGNLFIADTNNNIIRYLDL 920
              G ++IA+T+ + I   DL
Sbjct: 467 VTAGAVWIAETDAHAILRYDL 487


>gi|424792718|ref|ZP_18218917.1| hypothetical protein XTG29_01651 [Xanthomonas translucens pv.
           graminis ART-Xtg29]
 gi|422796954|gb|EKU25368.1| hypothetical protein XTG29_01651 [Xanthomonas translucens pv.
           graminis ART-Xtg29]
          Length = 473

 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 239/489 (48%), Gaps = 40/489 (8%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           E P    WLN AP   R + +G+ +VL F     + C   L +L   + +       ++ 
Sbjct: 8   ELPQPGIWLNAAPTTLR-EQQGRALVLAFVNAASVWCAQRLGELAQWQARNPGR-LQLIV 65

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           V   +FD+E++ +     +   G+S P++ D D   W+  GV +WPT  ++   G    +
Sbjct: 66  VQVPRFDSEREPQRALKLLRSQGVSAPILLDADWAAWQRFGVQAWPTLVLLDAGGYERER 125

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDIL 611
           L G G   DL   + A  L  G+   LD   L  + E   +PRL    L+FP  LA  + 
Sbjct: 126 LVGIGG-ADLGKALNA--LCAGQSLPLDEE-LRDARETQPEPRL---SLRFPVGLA--LA 176

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           ++RL+I+DS H+RI+     G  + Q G  G     DG   +A F+RP+GLA   ++ +L
Sbjct: 177 DDRLYIADSGHHRILECTTGGRVLRQFG-LGTADFIDGGIGEAAFHRPRGLAL--ERGVL 233

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPINEKV 730
           YVADT NHALR I+ ++  V TL GNG      +G  +   Q  LN P DV     + +V
Sbjct: 234 YVADTGNHALRRINLLSGHVDTLCGNGRACEPVEGPVQHPRQAPLNHPQDVVVA--DNQV 291

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           ++AMAG ++IW +   +   R  +G G     +GS  L  +FAQP   SL+     +YV 
Sbjct: 292 HLAMAGDNRIWSYELGNRSLRWRAGAGALELRDGSGHL-AAFAQPC--SLAAVQQALYVC 348

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ- 849
           D+  S++RAL L+    + L GG        + FG+ DG  S   LQ P  +  + +   
Sbjct: 349 DALGSAVRALQLRGDLVQTLLGG-----QGPWDFGNEDGPRSRARLQFPQAIALSPDAPL 403

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           +++ADS N  ++ L      +ST              L  +L  PAG +    G ++IA+
Sbjct: 404 LWIADSGNGSLRSLRLGGGDLST------------TPLPRRLHGPAG-LAVSAGTVWIAE 450

Query: 910 TN-NNIIRY 917
           T+ + ++RY
Sbjct: 451 TDAHAVLRY 459



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P+G+  A + ++Y+ADS +H+I +      RV    G+G A F DG    A    P 
Sbjct: 167 LRFPVGLALADD-RLYIADSGHHRILECT-TGGRVLRQFGLGTADFIDGGIGEAAFHRPR 224

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
           G+   + G L++ADT N+ +R ++L
Sbjct: 225 GL-ALERGVLYVADTGNHALRRINL 248


>gi|254524393|ref|ZP_05136448.1| NHL repeat protein [Stenotrophomonas sp. SKA14]
 gi|219721984|gb|EED40509.1| NHL repeat protein [Stenotrophomonas sp. SKA14]
          Length = 470

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 240/493 (48%), Gaps = 44/493 (8%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL-EFLEKKYKDMPFT 488
           VP+ P    WLN  P     +L+G+ V L F           L +  ++L +    +   
Sbjct: 6   VPDLPEFATWLNATPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFGQWLSRHPGKLQPL 64

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+ V   +FD E+D  A    + R G++ PV+ D D + WR  G+N+WPT  ++   G+ 
Sbjct: 65  VLQV--PRFDFERDPGAALKLLRRQGLTMPVLLDADWDGWRRFGINAWPTMVLLDAQGRE 122

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
             +L G+G   +L+  + A  L  G      + P     E   +PR     L+FP  LA+
Sbjct: 123 QQRLVGQGAPGELERALNA--LCQGAP----SAPPRGGSELHPEPR---QALRFPLGLAV 173

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKK 668
                RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    ++
Sbjct: 174 S--TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--ER 228

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPIN 727
           + LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  +     +
Sbjct: 229 DALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP--IGLAIAD 286

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    +  
Sbjct: 287 NQLHIAMAGDNRIWSYHLGQRSLQWRAGSGAIDERDGSGHL-AAFAQPTALAVVQQVL-- 343

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           YVAD+  SSIRAL L+    + L G  P      ++FG+ DG  ++  LQ P  +  + +
Sbjct: 344 YVADALGSSIRALQLRGDLVQTLVGQGP------WRFGNEDGPRAQARLQFPQAIALSPD 397

Query: 848 GQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
              +++ADS N +++ L      ++T              L  +L  PAG +    G ++
Sbjct: 398 APLLWIADSGNGRLRTLRLGGGELTT------------QPLPRRLQGPAG-LAVGAGAVW 444

Query: 907 IADTNNNIIRYLD 919
           IA+T+ + +  LD
Sbjct: 445 IAETDAHAVLRLD 457



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ PLG+  +   ++Y+ADS +H+I +      R+    G+G A F DG    A    P 
Sbjct: 165 LRFPLGLAVSTE-RLYIADSGHHRILECS-HGGRILRQFGLGTADFMDGNLAEAAFHRPQ 222

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++  ++  L++ADT N+ +R ++L
Sbjct: 223 ALVLERDA-LYVADTGNHAVRRINL 246


>gi|344206806|ref|YP_004791947.1| NHL repeat containing protein [Stenotrophomonas maltophilia JV3]
 gi|343778168|gb|AEM50721.1| NHL repeat containing protein [Stenotrophomonas maltophilia JV3]
          Length = 470

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 238/493 (48%), Gaps = 44/493 (8%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL-EFLEKKYKDMPFT 488
           VP+ P    WLN  P     +L+G+ V L F           L +  ++L +    +   
Sbjct: 6   VPDLPEFATWLNATPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFGQWLSRHPGKLQPL 64

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+ V   +FD E+D  A    + R G++ PV+ D D + WR  GV +WPT  ++   G+ 
Sbjct: 65  VLQV--PRFDFERDASAALKLLRRQGLAMPVLLDADWDGWRRFGVTAWPTMVLLDAQGRE 122

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
             +L G+G   +L+  + A  L  G      + P     E   +PR     L+FP  LA+
Sbjct: 123 QQRLVGQGAPGELERALNA--LCQGAP----SAPPRGGSELHPEPR---QALRFPLGLAV 173

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKK 668
                RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    ++
Sbjct: 174 S--TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--ER 228

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPIN 727
           + LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  V     +
Sbjct: 229 DSLYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP--VGLAIAD 286

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    +  
Sbjct: 287 NQLHIAMAGDNRIWSYHLGQRSLQWRAGSGSIDERDGSGHL-AAFAQPTALAVVQQVL-- 343

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           YVAD+  SSIRAL L+    + L G  P      ++FG  DG  ++  LQ+P  +  + +
Sbjct: 344 YVADALGSSIRALQLRGDLVQTLVGQGP------WRFGSEDGPRAQASLQYPQAIALSAD 397

Query: 848 GQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
              +++AD+ N +++ L      ++T              L  +L  PAG +    G ++
Sbjct: 398 APLLWIADTGNGRLRTLRLGGGELTT------------QPLPRRLHGPAG-LAVGAGAVW 444

Query: 907 IADTNNNIIRYLD 919
           IA+T+ + +   D
Sbjct: 445 IAETDAHAVLRFD 457



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 108/280 (38%), Gaps = 63/280 (22%)

Query: 709 KGTSQLLNSPWDVCYKPI-----NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN 763
           +G S+L   P      P+      E++YIA +G H+I E S    + R F G G    ++
Sbjct: 152 RGGSELHPEPRQALRFPLGLAVSTERLYIADSGHHRILECSHGGRILRQF-GLGTADFMD 210

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFP---- 818
           G+ +   +F +P  + L  D   +YVAD+ + ++R +NL TG    L G G P  P    
Sbjct: 211 GNLA-EAAFHRPQALVLERD--SLYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGP 267

Query: 819 ------------------DNLFKFG---------------------------DRDGMGSE 833
                             DN                                +RDG G  
Sbjct: 268 VAQARQVSLDHPVGLAIADNQLHIAMAGDNRIWSYHLGQRSLQWRAGSGSIDERDGSGHL 327

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQL 891
                P  +   +   +YVAD+    I+ L    + V TL G G  + G +DG    A L
Sbjct: 328 AAFAQPTALAVVQQ-VLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGSEDGPRAQASL 386

Query: 892 SEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTL 930
             P  I + A    L+IADT N  +R L L   E   Q L
Sbjct: 387 QYPQAIALSADAPLLWIADTGNGRLRTLRLGGGELTTQPL 426


>gi|325926967|ref|ZP_08188244.1| NHL repeat protein [Xanthomonas perforans 91-118]
 gi|325542663|gb|EGD14128.1| NHL repeat protein [Xanthomonas perforans 91-118]
          Length = 443

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 222/455 (48%), Gaps = 32/455 (7%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D   L    E++ +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSD-ADLHGVAEREPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASPGASA-LNYPQG 282

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 283 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALEIRDGSGHL-AAFAQPAGLAS 339

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 340 VQQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 392

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
            +  A +   +++AD+ N +++ L      ++T+A
Sbjct: 393 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTVA 427



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 18/200 (9%)

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           +++Y+A  G H++ E +    V R F G G    ++G      +F +P G++L  D  ++
Sbjct: 177 DRLYVADTGHHRVLECTHSGRVLRQF-GHGNADLIDGGVG-EAAFRRPQGLALERD--QL 232

Query: 788 YVADSESSSIRALNLKTGGSRLLAG----GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
           YVAD+ + ++R +NL++G    L G    G+P+        G     G+  L  +P G+ 
Sbjct: 233 YVADTGNHALRRINLRSGQVDTLCGTGRSGEPVE-------GPLASPGASAL-NYPQGLA 284

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
            A N Q+ +A + +++I         ++  AG G    +DG+   A  ++PAG+   Q  
Sbjct: 285 IADN-QVLIAMAGDNRIWSYHLGRAALTARAGTGALEIRDGSGHLAAFAQPAGLASVQQ- 342

Query: 904 NLFIADTNNNIIRYLDLNKE 923
             ++ D   + IR + L  +
Sbjct: 343 VAYVCDGLGSSIRTMQLRGD 362


>gi|418523208|ref|ZP_13089230.1| hypothetical protein WS7_19596 [Xanthomonas axonopodis pv.
           malvacearum str. GSPB2388]
 gi|410700170|gb|EKQ58738.1| hypothetical protein WS7_19596 [Xanthomonas axonopodis pv.
           malvacearum str. GSPB2388]
          Length = 472

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 221/455 (48%), Gaps = 32/455 (7%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G+    D   L    E++ +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQPPPSD-ADLRGVAEREPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+I+D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDRLYIADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASPGGSA-LNYPQG 282

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 283 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGTLEIRDGSGHL-AAFAQPAGLAS 339

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 340 VQQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 392

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
            +  A +   +++AD+ N +++ L      ++T+A
Sbjct: 393 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTVA 427


>gi|289665900|ref|ZP_06487481.1| hypothetical protein XcampvN_23187 [Xanthomonas campestris pv.
           vasculorum NCPPB 702]
          Length = 472

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 220/454 (48%), Gaps = 32/454 (7%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQVIVVQVPRFDSERVPQRALKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D   L    E+  +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSD-ADLHGVAERGPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGELVEGPLASAGASA-LNYPQG 282

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 283 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALEARDGSGHL-AAFAQPAGLAS 339

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 340 VQQMA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 392

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTL 873
            +  A +   +++AD+ N +++ L      ++T+
Sbjct: 393 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTV 426


>gi|386717879|ref|YP_006184205.1| hypothetical protein SMD_1470 [Stenotrophomonas maltophilia D457]
 gi|384077441|emb|CCH12027.1| Alr1013 protein [Stenotrophomonas maltophilia D457]
          Length = 470

 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 237/493 (48%), Gaps = 44/493 (8%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL-EFLEKKYKDMPFT 488
           VP+ P    WLN  P     +L+G+ V L F           L +  ++L +    +   
Sbjct: 6   VPDLPEFATWLNATPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFGQWLSRHPGKLQPL 64

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+ V   +FD E+D  A    + R G++ PV+ D D + WR  GV +WPT  ++   G+ 
Sbjct: 65  VLQV--PRFDFERDASAALKLLRRQGLAMPVLLDADWDGWRRFGVTAWPTVVLLDAQGRE 122

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
             +L G+G   +L+  +    L  G      + P     E   +PR     L+FP  LA+
Sbjct: 123 QQRLVGQGAPGELERALNT--LCQGAP----SAPPRGGSELHPEPR---QALRFPLGLAV 173

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKK 668
                RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    ++
Sbjct: 174 S--TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--ER 228

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPIN 727
           + LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  V     +
Sbjct: 229 DSLYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPMEGPVAQARQVSLDHP--VGLAIAD 286

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    +  
Sbjct: 287 NQLHIAMAGDNRIWSYHLGQRSLQWRAGSGSIDERDGSGHL-AAFAQPTALAVVQQVL-- 343

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           YVAD+  SSIRAL L+    + L G  P      ++FG  DG  ++  LQ+P  +  + +
Sbjct: 344 YVADALGSSIRALQLRGDLVQTLVGQGP------WRFGSEDGPRAQASLQYPQAIALSAD 397

Query: 848 GQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLF 906
              +++AD+ N +++ L      ++T              L  +L  PAG +    G ++
Sbjct: 398 APLLWIADTGNGRLRTLRLGGGELTT------------QPLPRRLHGPAG-LAVGAGAVW 444

Query: 907 IADTNNNIIRYLD 919
           IA+T+ + +   D
Sbjct: 445 IAETDAHAVLRFD 457



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P GLA + ++  LY+AD+ +H + E       +R   G GT  +D+  G    +   + P
Sbjct: 168 PLGLAVSTER--LYIADSGHHRILECSHGGRILRQF-GLGT--ADFMDGNLAEAAF-HRP 221

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNG--SSSLNTSFAQP 775
             +  +   + +Y+A  G H +   + + G+     G+G     + G  + +   S   P
Sbjct: 222 QALVLE--RDSLYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPMEGPVAQARQVSLDHP 279

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            G++++ +  ++++A +  + I + +L     +  AG   I         +RDG G    
Sbjct: 280 VGLAIADN--QLHIAMAGDNRIWSYHLGQRSLQWRAGSGSI--------DERDGSGHLAA 329

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSE 893
              P  +   +   +YVAD+    I+ L    + V TL G G  + G +DG    A L  
Sbjct: 330 FAQPTALAVVQQ-VLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGSEDGPRAQASLQY 388

Query: 894 PAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTL 930
           P  I + A    L+IADT N  +R L L   E   Q L
Sbjct: 389 PQAIALSADAPLLWIADTGNGRLRTLRLGGGELTTQPL 426



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ PLG+  +   ++Y+ADS +H+I +      R+    G+G A F DG    A    P 
Sbjct: 165 LRFPLGLAVSTE-RLYIADSGHHRILECS-HGGRILRQFGLGTADFMDGNLAEAAFHRPQ 222

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++  ++ +L++ADT N+ +R ++L
Sbjct: 223 ALVLERD-SLYVADTGNHAVRRINL 246


>gi|381173685|ref|ZP_09882761.1| NHL repeat family protein [Xanthomonas citri pv. mangiferaeindicae
           LMG 941]
 gi|380685855|emb|CCG39248.1| NHL repeat family protein [Xanthomonas citri pv. mangiferaeindicae
           LMG 941]
          Length = 472

 Score =  182 bits (463), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 221/455 (48%), Gaps = 32/455 (7%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G+    D   L    E++ +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQPPPSD-ADLHGVAEREPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASPGGSA-LNYPQG 282

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 283 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALEIRDGSGHL-AAFAQPAGLAS 339

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 340 VQQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 392

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
            +  A +   +++AD+ N +++ L      ++T+A
Sbjct: 393 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTVA 427


>gi|325917587|ref|ZP_08179787.1| NHL repeat protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325536221|gb|EGD08017.1| NHL repeat protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 472

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 220/452 (48%), Gaps = 32/452 (7%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + +   
Sbjct: 4   QLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAQWQARSPG 59

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++  
Sbjct: 60  R-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLLDA 118

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
            G+   +L G     DLD  + A  L  G++   D   L    E++ +PRL    L+FP 
Sbjct: 119 YGRERQRLVGV--TGDLDKALAA--LCEGQQPPSD-ADLQGIAEREPEPRL---ALRFPT 170

Query: 605 KLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
            LA     +RL+I+D+ H+R++     G  + Q G  G   L DG   +A F RPQGLA 
Sbjct: 171 GLAAT--EDRLYIADTGHHRVLECTHGGRVLRQFG-HGNADLIDGGTGEAAFRRPQGLAL 227

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWDVC 722
             +++ LYVADT NHALR I+  N  V TL G G  G   +G     G S  LN P  + 
Sbjct: 228 --ERDQLYVADTGNHALRRINLRNGQVDTLCGTGRSGEPVEGPLAFAGASA-LNYPQGLA 284

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++   
Sbjct: 285 IA--DNQVLIAMAGDNRIWSYDLGRAALSARAGTGSLELRDGSGHL-AAFAQPAGLAAVQ 341

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
                YV D   SSIR + L+    + L GG  I     ++FG+ DG      LQ P  +
Sbjct: 342 QVA--YVCDGLGSSIRTMQLRGDLVQTLVGGQGI-----WQFGEEDGPRGTARLQFPQAI 394

Query: 843 YCAKNG-QIYVADSYNHKIKKLDPASNRVSTL 873
             A +   +++AD+ N +++ L      ++T+
Sbjct: 395 ALAADSPMLWIADTGNGRLRCLRLGGGELTTV 426



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 107/260 (41%), Gaps = 61/260 (23%)

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
            +++YIA  G H++ E +    V R F G G    ++G +    +F +P G++L  D  +
Sbjct: 176 EDRLYIADTGHHRVLECTHGGRVLRQF-GHGNADLIDGGTG-EAAFRRPQGLALERD--Q 231

Query: 787 IYVADSESSSIRALNLKTGGSRLLAG----GDPI-------------FPDNL-------- 821
           +YVAD+ + ++R +NL+ G    L G    G+P+             +P  L        
Sbjct: 232 LYVADTGNHALRRINLRNGQVDTLCGTGRSGEPVEGPLAFAGASALNYPQGLAIADNQVL 291

Query: 822 -----------FKFGD--------------RDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
                      +  G               RDG G       P G+   +    YV D  
Sbjct: 292 IAMAGDNRIWSYDLGRAALSARAGTGSLELRDGSGHLAAFAQPAGLAAVQQ-VAYVCDGL 350

Query: 857 NHKIKKLDPASNRVSTLAG---IGKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNN 912
              I+ +    + V TL G   I + G +DG    A+L  P  I + A +  L+IADT N
Sbjct: 351 GSSIRTMQLRGDLVQTLVGGQGIWQFGEEDGPRGTARLQFPQAIALAADSPMLWIADTGN 410

Query: 913 NIIRYLDLNKEEPELQTLEL 932
             +R L L     EL T+EL
Sbjct: 411 GRLRCLRLGGG--ELTTVEL 428


>gi|21242830|ref|NP_642412.1| hypothetical protein XAC2091 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108317|gb|AAM36948.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 499

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 221/455 (48%), Gaps = 32/455 (7%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 29  NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 84

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 85  PGR-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 143

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G+    D   L    E++ +P L    L+F
Sbjct: 144 DAYGRERQRLVGV--TGDLDKALTA--LCEGQPPPSD-ADLHGVAEREPEPHL---ALRF 195

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 196 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 252

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 253 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASPGGSA-LNYPQG 309

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 310 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALEIRDGSGHL-AAFAQPAGLAS 366

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 367 VQQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 419

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
            +  A +   +++AD+ N +++ L      ++T+A
Sbjct: 420 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTVA 454


>gi|408824784|ref|ZP_11209674.1| NHL repeat containing protein [Pseudomonas geniculata N1]
          Length = 470

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 237/494 (47%), Gaps = 46/494 (9%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL-EFLEKKYKDMPFT 488
           VP+ P    WLN  P     +L+G+ V L F           L +  ++L +    +   
Sbjct: 6   VPDLPEFATWLNATPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFGQWLSRHPGKLQPL 64

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+ V   +FD E+D  A    + R G++ PV+ D D + WR  G+ +WPT  ++   G+ 
Sbjct: 65  VLQV--PRFDFERDAGAALKLLRRQGLTMPVLLDADWDGWRRFGITAWPTLVLLDAQGRE 122

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTP-LPLSLEKDNDPRLFTSPLKFPGKLA 607
             +L G+G   +L+  + A         L +  P  P     +  P L  + L+FP  LA
Sbjct: 123 QQRLVGQGAPGELERALNA---------LCEGAPSAPPRGGSELHPELRQA-LRFPLGLA 172

Query: 608 IDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           +     RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    +
Sbjct: 173 VS--TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--E 227

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPI 726
           ++ LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  V     
Sbjct: 228 RDALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP--VGLAIA 285

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
           + +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    + 
Sbjct: 286 DNQLHIAMAGDNRIWSYHLGQRSLQWRAGSGSIDERDGSGHL-AAFAQPTALAVVQQVL- 343

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
            YVAD+  SSIRAL L+    + L G  P      ++FG  DG  ++  LQ P  +  + 
Sbjct: 344 -YVADALGSSIRALQLRGDLVQTLVGQGP------WRFGSEDGPRADASLQFPQAIALSP 396

Query: 847 NGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
           +   +++AD+ N +++ L      ++T              L  +L  PAG +    G +
Sbjct: 397 DAPLLWIADTGNGRLRTLRLGGGELTT------------QPLPRRLHGPAG-LAVGAGAV 443

Query: 906 FIADTNNNIIRYLD 919
           +IA+T+ + +   D
Sbjct: 444 WIAETDAHAVLRFD 457



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P GLA + ++  LY+AD+ +H + E       +R   G GT  +D+  G    +   + P
Sbjct: 168 PLGLAVSTER--LYIADSGHHRILECSHGGRILRQF-GLGT--ADFMDGNLAEAAF-HRP 221

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNG--SSSLNTSFAQP 775
             +  +   + +Y+A  G H +   + + G+     G+G     + G  + +   S   P
Sbjct: 222 QALVLE--RDALYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP 279

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            G++++ +  ++++A +  + I + +L     +  AG   I         +RDG G    
Sbjct: 280 VGLAIADN--QLHIAMAGDNRIWSYHLGQRSLQWRAGSGSI--------DERDGSGHLAA 329

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSE 893
              P  +   +   +YVAD+    I+ L    + V TL G G  + G +DG    A L  
Sbjct: 330 FAQPTALAVVQQ-VLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGSEDGPRADASLQF 388

Query: 894 PAGIIEAQNGNL-FIADTNNNIIRYLDLNKEEPELQTL 930
           P  I  + +  L +IADT N  +R L L   E   Q L
Sbjct: 389 PQAIALSPDAPLLWIADTGNGRLRTLRLGGGELTTQPL 426



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ PLG+  +   ++Y+ADS +H+I +      R+    G+G A F DG    A    P 
Sbjct: 165 LRFPLGLAVSTE-RLYIADSGHHRILECS-HGGRILRQFGLGTADFMDGNLAEAAFHRPQ 222

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++  ++  L++ADT N+ +R ++L
Sbjct: 223 ALVLERDA-LYVADTGNHAVRRINL 246


>gi|325923856|ref|ZP_08185461.1| NHL repeat protein [Xanthomonas gardneri ATCC 19865]
 gi|325545661|gb|EGD16910.1| NHL repeat protein [Xanthomonas gardneri ATCC 19865]
          Length = 472

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 219/451 (48%), Gaps = 30/451 (6%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + +   
Sbjct: 4   QLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARSPG 59

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++  
Sbjct: 60  R-LQVIVVQVPRFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLLDA 118

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
            G+   +L G     DLD  + A  L  G++   D   L    E++ +PRL    L+FP 
Sbjct: 119 YGRERQRLVGV--TGDLDKALVA--LCEGQQPPSD-IDLHGVAEREAEPRL---ELQFPT 170

Query: 605 KLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY 664
            LA     +RL+I+D+ H+R++     G  + Q G  G   L DG   +A F RPQGLA 
Sbjct: 171 GLAAT--EDRLYIADTGHHRVLECTHGGRVLRQFG-HGNADLIDGGVGEAAFRRPQGLAL 227

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS-QLLNSPWDVCY 723
             +++ LYVADT NHALR I+  +  V TL G G  G   +G    +S   LN P  +  
Sbjct: 228 --ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASSSASALNYPQGLAI 285

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
              + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++    
Sbjct: 286 A--DNQVLIAMAGDNRIWSYHLGSAALTARAGTGSLEIRDGSGHL-AAFAQPAGLAAVQQ 342

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
               YV D   SSIR + L+    + L GG        + FGD+DG      LQ P  + 
Sbjct: 343 VA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWLFGDQDGPRGTARLQFPQAIA 395

Query: 844 CAKNGQ-IYVADSYNHKIKKLDPASNRVSTL 873
            A +   +++AD+ N +++ L      ++T+
Sbjct: 396 LAADSPLLWIADTGNGRLRCLRLGGGELTTV 426


>gi|58581916|ref|YP_200932.1| hypothetical protein XOO2293 [Xanthomonas oryzae pv. oryzae KACC
           10331]
 gi|58426510|gb|AAW75547.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
           10331]
          Length = 472

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 221/453 (48%), Gaps = 30/453 (6%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAESLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 ++ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQLIVVQVPRFDSERVPQRALKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D     ++ E+D +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSDADLYGVA-ERDPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     + L+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDLLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG-EKGTSQLLNSPWDV 721
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     ++  LN P  +
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASASASALNYPQGL 283

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
                + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++  
Sbjct: 284 AIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALETRDGSGHL-AAFAQPAGLASV 340

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                 YV D   SSIR + L+    + L GG        ++FGD+DG  S   +Q P  
Sbjct: 341 QQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARVQFPQA 393

Query: 842 VYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTL 873
           +  A +   +++AD+ N +++ L      ++T+
Sbjct: 394 IALAADSPLLWIADTGNGRLRCLRLGGGDLTTV 426


>gi|84623828|ref|YP_451200.1| hypothetical protein XOO_2171 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84367768|dbj|BAE68926.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 499

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 221/453 (48%), Gaps = 30/453 (6%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 29  NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAESLAELAHWQARS 84

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 ++ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 85  PGR-LQLIVVQVPRFDSERVPQRALKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 143

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D     ++ E+D +P L    L+F
Sbjct: 144 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSDADLYGVA-ERDPEPHL---ALRF 195

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     + L+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 196 PTGLAAT--EDLLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 252

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG-EKGTSQLLNSPWDV 721
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     ++  LN P  +
Sbjct: 253 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASASASALNYPQGL 310

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
                + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++  
Sbjct: 311 AIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALETRDGSGHL-AAFAQPAGLASV 367

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                 YV D   SSIR + L+    + L GG        ++FGD+DG  S   +Q P  
Sbjct: 368 QQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARVQFPQA 420

Query: 842 VYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTL 873
           +  A +   +++AD+ N +++ L      ++T+
Sbjct: 421 IALAADSPLLWIADTGNGRLRCLRLGGGDLTTV 453


>gi|188576512|ref|YP_001913441.1| hypothetical protein PXO_00583 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188520964|gb|ACD58909.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 472

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 221/453 (48%), Gaps = 30/453 (6%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 ++ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQLIVVQVPRFDSERVPQRALKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D     ++ E+D +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSDADLYGVA-ERDPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     + L+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDLLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG-EKGTSQLLNSPWDV 721
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     ++  LN P  +
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASASASALNYPQGL 283

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
                + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++  
Sbjct: 284 AIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALETRDGSGHL-AAFAQPAGLASV 340

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                 YV D   SSIR + L+    + L GG        ++FGD+DG  S   +Q P  
Sbjct: 341 QQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARVQFPQA 393

Query: 842 VYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTL 873
           +  A +   +++AD+ N +++ L      ++T+
Sbjct: 394 IALAADSPLLWIADTGNGRLRCLRLGGGDLTTV 426


>gi|390991569|ref|ZP_10261830.1| NHL repeat family protein [Xanthomonas axonopodis pv. punicae str.
           LMG 859]
 gi|372553665|emb|CCF68805.1| NHL repeat family protein [Xanthomonas axonopodis pv. punicae str.
           LMG 859]
          Length = 472

 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 220/455 (48%), Gaps = 32/455 (7%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V    FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQVIVVQVPCFDSERLPQRSLKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G+    D   L    E++ +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQPPPSD-ADLHGVAEREPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--GEKGTSQLLNSPWD 720
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G     G S  LN P  
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASPGGSA-LNYPQG 282

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
           +     + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++ 
Sbjct: 283 LAIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALEIRDGSGHL-AAFAQPAGLAS 339

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
                  YV D   SSIR + L+    + L GG        ++FGD+DG  S   LQ P 
Sbjct: 340 VQQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARLQFPQ 392

Query: 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLA 874
            +  A +   +++AD+ N +++ L      ++T+A
Sbjct: 393 AIALAADSPLLWIADTGNGRLRCLRLGGGELTTVA 427


>gi|159470937|ref|XP_001693613.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283116|gb|EDP08867.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 480

 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 94/186 (50%), Positives = 117/186 (62%), Gaps = 32/186 (17%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
           SPL++PGKLA D+   RLF+SDSN++R+V+TDL GNFI                      
Sbjct: 232 SPLRYPGKLATDLSGGRLFVSDSNNHRVVITDLAGNFI---------------------- 269

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
              GLAY+ ++N LYVADTENHA         TV TLAGNGTKG DY+GG+ G++Q LNS
Sbjct: 270 -EAGLAYSPRRNTLYVADTENHA---------TVVTLAGNGTKGRDYRGGKGGSAQPLNS 319

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           PWDV      E +YIA+AGQHQIW+     G+    SG G ERN NG +   TS+AQPSG
Sbjct: 320 PWDVALDAKEEYLYIALAGQHQIWDLELSSGLAGLCSGSGAERNQNGPTPFTTSWAQPSG 379

Query: 778 ISLSPD 783
           +SL+ D
Sbjct: 380 LSLAGD 385



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 153/375 (40%), Gaps = 129/375 (34%)

Query: 346 SGLQGSRREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGS 405
           +G + SRR++L+  SL     CL+ A +  +AM+YASP A+ N L               
Sbjct: 96  AGYRTSRRDLLKLVSLAGGAGCLWVAGTRLEAMKYASPAALMNAL--------------- 140

Query: 406 SQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQF-------RRDLKGKVVVL 458
                                 P VP+FP   DWLN+APL         R  L G+V VL
Sbjct: 141 -------------------APPPEVPDFPRGADWLNSAPLTLTGAPASARGSLTGRVTVL 181

Query: 459 DFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHP 518
           DFWTYCCINC+HVLPDL  LE ++   P  VVGVHSAKFDNEKD      + LRY     
Sbjct: 182 DFWTYCCINCIHVLPDLAQLEAQFAGAPVCVVGVHSAKFDNEKDRAQAGASPLRY----- 236

Query: 519 VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAG--------EGHRKDLDDL----VE 566
                                      GKL   L+G          HR  + DL    +E
Sbjct: 237 --------------------------PGKLATDLSGGRLFVSDSNNHRVVITDLAGNFIE 270

Query: 567 AALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIV 626
           A L +                     PR                  N L+++D+ ++  V
Sbjct: 271 AGLAY--------------------SPR-----------------RNTLYVADTENHATV 293

Query: 627 VTDLDGNFIVQIGSSGEEGLRDGSFDDAT-FNRPQGLAYNAKKNLLYVADTENHALREID 685
           VT L GN     G+ G +  R G    A   N P  +A +AK+  LY+A    H + +++
Sbjct: 294 VT-LAGN-----GTKGRD-YRGGKGGSAQPLNSPWDVALDAKEEYLYIALAGQHQIWDLE 346

Query: 686 FVNDTVRTLAGNGTK 700
             +      +G+G +
Sbjct: 347 LSSGLAGLCSGSGAE 361


>gi|163841552|ref|YP_001625957.1| hypothetical protein RSal33209_2819 [Renibacterium salmoninarum
           ATCC 33209]
 gi|162955028|gb|ABY24543.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 425

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/406 (34%), Positives = 206/406 (50%), Gaps = 51/406 (12%)

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPL 600
           V+ P G ++A L+GEGH   L+  +   +  +  K  L     P    +   PR  T  L
Sbjct: 2   VIDPEGYIVANLSGEGHAAGLESFIPELIAIHEAKGTLHRGDGPYVAPE---PRAGT--L 56

Query: 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           +FPGK+A  + N    +SD+ H+R+V  + D   +V+   +G +G  DG+   A FN PQ
Sbjct: 57  RFPGKVA-PLRNRNFLVSDTGHHRLVELEADLETVVRAFGTGTKGFADGAAQMARFNEPQ 115

Query: 661 GLAYNAK---KNLLY---VADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-------G 707
           GL    +     L Y   VAD+ NH LR I   + +VRTLAGNG +     G       G
Sbjct: 116 GLVLLPEVLAAQLGYDVVVADSVNHRLRGISLTDGSVRTLAGNGVQRLLDAGPNTVNDDG 175

Query: 708 EKGTSQLLN---------SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758
           E GTS +L+         SPWDV Y     +V IAMAG HQI+            +G G 
Sbjct: 176 E-GTSGVLSGDPLTIALSSPWDVTYSETLGQVVIAMAGTHQIFGFDPAAQTVSILAGTGL 234

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
           E  L+G++     FAQ SG+++  +  +I+VA SE+S++R L +  G    +   +    
Sbjct: 235 EGLLDGAAD-QAWFAQSSGLAVDAN-GDIWVAASETSALRVLRVTDGRVNRV---ETAVG 289

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
           + LF FG +DG  S   LQHPLGV    +G + +AD+YN  +++ DPAS  VSTLA    
Sbjct: 290 EGLFDFGFQDGDASAARLQHPLGVAALPDGSVAIADTYNGAVRRYDPASKTVSTLA---- 345

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFI-ADTNNNIIRYLDLNKE 923
              +D       L+EP+ ++   +G+L I  + N + +  + L KE
Sbjct: 346 ---RD-------LAEPSDVV--LDGDLLIVVEANRHQLSRVALPKE 379


>gi|194365180|ref|YP_002027790.1| NHL repeat containing protein [Stenotrophomonas maltophilia R551-3]
 gi|194347984|gb|ACF51107.1| NHL repeat containing protein [Stenotrophomonas maltophilia R551-3]
          Length = 470

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 221/446 (49%), Gaps = 31/446 (6%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL-EFLEKKYKDMPFT 488
           VP+ P    WLN  P     +L+G+ V L F           L +  ++L +    +   
Sbjct: 6   VPDLPEFATWLNATPCTLT-ELRGRPVALLFVNAASAWSAQRLAEFGQWLSRHPGKLQPL 64

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+ V   +FD E++ +A    + R G++ PV+ D D + WR  GV +WPT  ++   G+ 
Sbjct: 65  VLQV--PRFDFEREADAALKLLRRQGLTMPVLLDADWDGWRRFGVTAWPTIVLLDAQGRE 122

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAI 608
             +L G+G   +L+  + A  L  G      + P     E   +PR     L+FP  LA+
Sbjct: 123 QQRLVGQGAPGELERALNA--LCEGAP----SAPPRGGSELHPEPR---HALRFPLGLAV 173

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKK 668
                RL+I+DS H+RI+     G  + Q G  G     DG+  +A F+RPQ L    ++
Sbjct: 174 S--TERLYIADSGHHRILECSHGGRILRQFG-LGTADFMDGNLAEAAFHRPQALVL--ER 228

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LNSPWDVCYKPIN 727
           + LYVADT NHA+R I+ +   V TL GNG  G+  +G      Q+ L+ P  V     +
Sbjct: 229 DSLYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP--VGLAIAD 286

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
            +++IAMAG ++IW +       +  +G G     +GS  L  +FAQP+ +++    +  
Sbjct: 287 NQLHIAMAGDNRIWSYHLGQRSLQWRAGSGSIDERDGSGHL-AAFAQPTALAVVQQVL-- 343

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           YVAD+  SSIRAL L+    + L G  P      ++FG+ DG  ++  LQ P  +  + +
Sbjct: 344 YVADALGSSIRALQLRGDLVQTLVGQGP------WRFGNEDGPRTQASLQFPQAMALSPD 397

Query: 848 GQ-IYVADSYNHKIKKLDPASNRVST 872
              +++AD+ N +++ L      ++T
Sbjct: 398 APLLWIADTGNGRLRTLRLGGGELTT 423



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 25/278 (8%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P GLA + ++  LY+AD+ +H + E       +R   G GT  +D+  G    +   + P
Sbjct: 168 PLGLAVSTER--LYIADSGHHRILECSHGGRILRQF-GLGT--ADFMDGNLAEAAF-HRP 221

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNG--SSSLNTSFAQP 775
             +  +   + +Y+A  G H +   + + G+     G+G     + G  + +   S   P
Sbjct: 222 QALVLE--RDSLYVADTGNHAVRRINLLTGIVDTLCGNGRPGAPVEGPVAQARQVSLDHP 279

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            G++++ +  ++++A +  + I + +L     +  AG   I         +RDG G    
Sbjct: 280 VGLAIADN--QLHIAMAGDNRIWSYHLGQRSLQWRAGSGSI--------DERDGSGHLAA 329

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAAQLSE 893
              P  +   +   +YVAD+    I+ L    + V TL G G  + G +DG    A L  
Sbjct: 330 FAQPTALAVVQQ-VLYVADALGSSIRALQLRGDLVQTLVGQGPWRFGNEDGPRTQASLQF 388

Query: 894 PAGIIEAQNGNL-FIADTNNNIIRYLDLNKEEPELQTL 930
           P  +  + +  L +IADT N  +R L L   E   Q L
Sbjct: 389 PQAMALSPDAPLLWIADTGNGRLRTLRLGGGELTTQPL 426



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ PLG+  +   ++Y+ADS +H+I +      R+    G+G A F DG    A    P 
Sbjct: 165 LRFPLGLAVSTE-RLYIADSGHHRILECS-HGGRILRQFGLGTADFMDGNLAEAAFHRPQ 222

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++  ++ +L++ADT N+ +R ++L
Sbjct: 223 ALVLERD-SLYVADTGNHAVRRINL 246


>gi|384419507|ref|YP_005628867.1| hypothetical protein XOC_2585 [Xanthomonas oryzae pv. oryzicola
           BLS256]
 gi|353462420|gb|AEQ96699.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 472

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 218/453 (48%), Gaps = 30/453 (6%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   + + +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQ-EHRGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 ++ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQLIVVQVPRFDSERVPQRALKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D   L    E D +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSD-ADLHGVAEHDPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     + L+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDLLYVADTGHHRVLECMHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG-EKGTSQLLNSPWDV 721
           A  + +  LYVADT NHALR I+  +  V TL G G  G   +G     ++  LN P  +
Sbjct: 226 ALESDQ--LYVADTGNHALRRINLRSGQVDTLCGTGRSGDPVEGPLASASASALNYPQGL 283

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
                + +V IAMAG ++IW +        A +G G     +GS  L  +FAQP+G++  
Sbjct: 284 AIA--DNQVLIAMAGDNRIWSYHLGRAALTARAGTGALETRDGSGHL-AAFAQPAGLASV 340

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                 YV D   SSIR + L+    + L GG        ++FGD+DG  S   +Q P  
Sbjct: 341 QQVA--YVCDGLGSSIRTMQLRGDLVQTLVGG-----QGTWQFGDQDGPRSTARVQFPQA 393

Query: 842 VYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTL 873
           +  A +   +++AD+ N +++ L      ++T+
Sbjct: 394 IALAADSPLLWIADTGNGRLRCLRLGGGDLTTV 426


>gi|421740691|ref|ZP_16178929.1| NHL repeat protein [Streptomyces sp. SM8]
 gi|406690906|gb|EKC94689.1| NHL repeat protein [Streptomyces sp. SM8]
          Length = 444

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/279 (38%), Positives = 159/279 (56%), Gaps = 18/279 (6%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQ-IGSSGEEGLRDGSFDDATFNR 658
           L+FPG+ A+ + +    +SD+  +++V    DG  +V+ IG  GE GL DG   +A F+ 
Sbjct: 5   LRFPGR-AVLLPSGNFLVSDTTRHQLVELAEDGESVVRRIGGEGERGLADGGPAEARFSE 63

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT---KGSDYQGGEKGTSQLL 715
           PQGLA   + + + VADT NHALR ++  +  V T AG G    +GS   G  +     L
Sbjct: 64  PQGLALTPEGDAVIVADTVNHALRRVELASGVVTTPAGTGRQWWQGSPTSGPAREVD--L 121

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
           +SPWDV +     K++IAMAG HQ+W +    G     +G   E  ++G  +    FAQP
Sbjct: 122 SSPWDVAW--FGGKLWIAMAGTHQLWTYDPQAGTVAVAAGTTNEGLVDGPGA-EAWFAQP 178

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           SG++   D   ++VADSE+S++R ++ +  G+   A G       LF FG RDG  ++ L
Sbjct: 179 SGLAADGD-ARLWVADSETSALRWVDPE--GTVHTAVG-----TGLFDFGHRDGEAAQAL 230

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
            QHPL V    +G + V+D+YNH +++ DPAS  VSTLA
Sbjct: 231 FQHPLAVTVLPDGSVAVSDTYNHALRRYDPASGEVSTLA 269



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 9/185 (4%)

Query: 737 QHQIWEHSTVDG--VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
           +HQ+ E +  DG  V R   G+G ER L         F++P G++L+P+   + VAD+ +
Sbjct: 26  RHQLVELAE-DGESVVRRIGGEG-ERGLADGGPAEARFSEPQGLALTPEGDAVIVADTVN 83

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
            ++R + L +G     AG         ++     G   EV L  P  V     G++++A 
Sbjct: 84  HALRRVELASGVVTTPAGTG----RQWWQGSPTSGPAREVDLSSPWDVAW-FGGKLWIAM 138

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
           +  H++   DP +  V+  AG    G  DG    A  ++P+G+    +  L++AD+  + 
Sbjct: 139 AGTHQLWTYDPQAGTVAVAAGTTNEGLVDGPGAEAWFAQPSGLAADGDARLWVADSETSA 198

Query: 915 IRYLD 919
           +R++D
Sbjct: 199 LRWVD 203


>gi|31874765|emb|CAD98082.1| hypothetical protein [Homo sapiens]
          Length = 252

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/245 (41%), Positives = 143/245 (58%), Gaps = 23/245 (9%)

Query: 698 GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV------YIAMAGQHQIW---------- 741
           G +G+D +GG KG  Q ++SPWDV +     +V      +IAMAG HQIW          
Sbjct: 1   GIQGTDKEGGAKGEQQPISSPWDVVFGTSGSEVQRGDILWIAMAGTHQIWALLLDSGKLP 60

Query: 742 -EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIR 798
            ++    G    F+G G E N N +      FAQPSG+SL+ +  +  ++VADSESS++R
Sbjct: 61  KKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVR 120

Query: 799 ALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYN 857
            ++LK G  + L GG+   P NLF FGD DG+G    LQHPLGV +  K   +YVADSYN
Sbjct: 121 TVSLKDGAVKHLVGGERD-PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYN 179

Query: 858 HKIKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGIIEAQNGN-LFIADTNNNII 915
           HKIK +DP +   +TLAG G       ++   +  +EP G+   +NG  L++ADTNN+ I
Sbjct: 180 HKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQI 239

Query: 916 RYLDL 920
           + +DL
Sbjct: 240 KVMDL 244



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D D     + L+ P  +  D   N L+++DS +++I V D        +  +
Sbjct: 139 PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGT 198

Query: 642 GE-EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           G+   +   SF ++TFN P GL       LLYVADT NH ++ +D     V  +
Sbjct: 199 GDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVI 252



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 615 LFISDSNHNRIVVTDL-DGNFIVQIGSSGEE------GLRDGSFDDATFNRPQGLAYNAK 667
           LF++DS  + +    L DG     +G   +       G  DG   +A    P G+ ++ K
Sbjct: 109 LFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGVTWDKK 168

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +NLLYVAD+ NH ++ +D       TLAG G   ++       T    N P  +C     
Sbjct: 169 RNLLYVADSYNHKIKVVDPKTKNCTTLAGTGD--TNNVTSSSFTESTFNEPGGLCIGENG 226

Query: 728 EKVYIAMAGQHQI 740
           E +Y+A    HQI
Sbjct: 227 ELLYVADTNNHQI 239



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 16/177 (9%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKK--NLLYVADTENHALREIDFVNDTVRTLAG 696
           GS  EE   +     A F +P GL+  ++   + L+VAD+E+  +R +   +  V+ L G
Sbjct: 75  GSGNEENRNNAYPHKAGFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVG 134

Query: 697 ------NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
                 N     D  G   G +  L  P  V +      +Y+A +  H+I     VD  T
Sbjct: 135 GERDPMNLFAFGDVDG--VGINAKLQHPLGVTWDKKRNLLYVADSYNHKI---KVVDPKT 189

Query: 751 R---AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
           +     +G G   N+  SS   ++F +P G+ +  +   +YVAD+ +  I+ ++L+T
Sbjct: 190 KNCTTLAGTGDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLET 246


>gi|194767578|ref|XP_001965892.1| GF16360 [Drosophila ananassae]
 gi|190619368|gb|EDV34892.1| GF16360 [Drosophila ananassae]
          Length = 300

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/289 (39%), Positives = 160/289 (55%), Gaps = 37/289 (12%)

Query: 554 GEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNN 613
           GEG+ K L++ +  AL F+G++  L++  LPL L  + +P    S L+FP K+A      
Sbjct: 2   GEGNGKFLENFISVALSFFGRQGKLEHYNLPLQLSTNPNP---ASKLRFPAKIARSPAG- 57

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673
           R  ISD+ +NR++V    G  +  I    + GL DG F +A F  PQGL +   ++ L V
Sbjct: 58  RFAISDAGNNRVLVVSSRG-LVEHIIGDHKAGLIDGKFTEARFKHPQGLTF-LDEHTLIV 115

Query: 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY---------- 723
           ADTENHALR+I   +  V+TLAG G +G D  GG  G  Q ++SPWDV            
Sbjct: 116 ADTENHALRKISLADGIVKTLAGTGVQGCDRIGGNAGPVQPISSPWDVAIFRTRDMDMSF 175

Query: 724 ----KPINEK--VYIAMAGQHQIWEHSTVDGVT----RAFS--------GDGYERNLNGS 765
               + + EK  V I+MAG HQIW +   +G+     R F         G+G E N N S
Sbjct: 176 HLDERNVLEKTIVLISMAGTHQIWGYFP-EGIIWWKFRKFDPLCCVSLIGNGLEENRNNS 234

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGD 814
              N +FAQPSG+++S DF+  +VADSESSSIR ++L  G    + GGD
Sbjct: 235 YPQNAAFAQPSGLAMSKDFL--FVADSESSSIRKVSLVDGKVMPVVGGD 281



 Score = 40.0 bits (92), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%)

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
           K G  DG  +E   +HP G+       + VAD+ NH ++K+  A   V TLAG G  G
Sbjct: 86  KAGLIDGKFTEARFKHPQGLTFLDEHTLIVADTENHALRKISLADGIVKTLAGTGVQG 143


>gi|333993013|ref|YP_004525626.1| HAD superfamily hydrolase [Treponema azotonutricium ZAS-9]
 gi|333737089|gb|AEF83038.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Treponema
           azotonutricium ZAS-9]
          Length = 223

 Score =  168 bits (426), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 3/215 (1%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAE-MGVEVTVEDFLPFMGTGEANFLGGVASVKGVK 139
            V+FDMDGVL +SE     A   +F E     VT EDFLPF+G GE  FLGGVA    + 
Sbjct: 10  GVIFDMDGVLTDSEWFIAEAGKIMFRENHNTAVTHEDFLPFVGMGENRFLGGVAEKYRLN 69

Query: 140 GFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANL 199
           GFD E  KKR +EIY++        +  PGA+E +  C + G K A+A+S D IK++A+L
Sbjct: 70  GFDIERDKKRTYEIYVEIIKGKLDPL--PGAVEFVKACIAAGYKTALATSTDYIKMNASL 127

Query: 200 AAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQ 259
            A GL    F+A V+    E  KP PDIFL A++ + +    C V+ED++ GVQAAKAA 
Sbjct: 128 EAIGLAHGFFEATVNGLEVERRKPFPDIFLEAARRIGIAPDHCWVVEDSVGGVQAAKAAG 187

Query: 260 MRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           MRC+ + TT  E  +++A   +I K++ +V + +I
Sbjct: 188 MRCLGLLTTFPEGEIRKAGADIIVKDLSAVRVEEI 222


>gi|390342982|ref|XP_001201679.2| PREDICTED: NHL repeat-containing protein 2-like [Strongylocentrotus
            purpuratus]
          Length = 338

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 171/334 (51%), Gaps = 22/334 (6%)

Query: 753  FSGDGYERNLNGSSSLNTSFAQPSGISLSPD--FMEIYVADSESSSIRALNLKTGGSRLL 810
            ++G G E N N S      FAQPSG++L+P   F  ++VADSESSSIR +  K G  + +
Sbjct: 3    YAGSGKEENRNNSYPRKAGFAQPSGLALAPQEPFNCMFVADSESSSIRRVAFKDGAVKNV 62

Query: 811  AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
             GG+ + P NLF +GD DG G E  LQHPLGV    +  ++VADSYNHKIK +DP     
Sbjct: 63   VGGE-MDPMNLFAYGDSDGKGLEARLQHPLGVAWDHSKLLFVADSYNHKIKMIDPEERYC 121

Query: 871  STLAGIGKA--GFKDGAALAAQLSEPAGIIEAQNG-NLFIADTNNNIIRYLDLNKEEPEL 927
            +T AG G+   G  D   L AQ +EP G+  +  G  +++ADTNN+ IR +D+       
Sbjct: 122  ATYAGTGEPGKGGDDEHILKAQFNEPGGLAISPCGCKIYVADTNNHTIRCIDIKTS---- 177

Query: 928  QTLELKGVQPPTP----KSRSPKRLRRRSSPDAQTIVVDG---GLSNEGNIYLKISLPEE 980
               ELK V PP      K  +PK+++      A    V+G   GL     + L +SLP E
Sbjct: 178  TVTELKVVLPPVTSVDSKPSAPKKVKTMLPKHASPTTVEGLSVGLDGSVTLVLDVSLPPE 237

Query: 981  YHFSKEARSKFSVDV---EPENAVIIDPLDGNLSPEGSAVLHFRRMSPSVSTGRISCKVY 1037
             + ++ A S + + +   EP+  +    L+   +P  S        +    T ++   +Y
Sbjct: 238  SYLTEGAPSAWQIFIPGSEPQAVMSTTRLESLSNPLPSYTWTPPPDAQLPVTLQVESTLY 297

Query: 1038 YCKEDEVCLYKPLLFEVPF--QEEVPNSPPAEIT 1069
            YC    VC  + L + VP   QE  P     E++
Sbjct: 298  YCLTSGVCKRQVLGYSVPVTRQEGAPQDVKVELS 331



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 19/177 (10%)

Query: 641 SGEEGLRDGSFD-DATFNRPQGLAYNAKK--NLLYVADTENHALREIDFVNDTVRTLAGN 697
           SG+E  R+ S+   A F +P GLA   ++  N ++VAD+E+ ++R + F +  V+ + G 
Sbjct: 6   SGKEENRNNSYPRKAGFAQPSGLALAPQEPFNCMFVADSESSSIRRVAFKDGAVKNVVGG 65

Query: 698 --------GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749
                       SD +G E      L   WD      ++ +++A +  H+I      +  
Sbjct: 66  EMDPMNLFAYGDSDGKGLEARLQHPLGVAWD-----HSKLLFVADSYNHKIKMIDPEERY 120

Query: 750 TRAFSGDGYERNLNGSSS--LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
              ++G G E    G     L   F +P G+++SP   +IYVAD+ + +IR +++KT
Sbjct: 121 CATYAGTG-EPGKGGDDEHILKAQFNEPGGLAISPCGCKIYVADTNNHTIRCIDIKT 176



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D+D +   + L+ P  +A D  +  LF++DS +++I + D +  +      +
Sbjct: 69  PMNLFAYGDSDGKGLEARLQHPLGVAWD-HSKLLFVADSYNHKIKMIDPEERYCATYAGT 127

Query: 642 GE--EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           GE  +G  D     A FN P GLA +     +YVADT NH +R ID    TV  L
Sbjct: 128 GEPGKGGDDEHILKAQFNEPGGLAISPCGCKIYVADTNNHTIRCIDIKTSTVTEL 182



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 13/137 (9%)

Query: 613 NRLFISDSNHNRIV-VTDLDGNFIVQIGSSGEE------GLRDGSFDDATFNRPQGLAYN 665
           N +F++DS  + I  V   DG     +G   +       G  DG   +A    P G+A++
Sbjct: 37  NCMFVADSESSSIRRVAFKDGAVKNVVGGEMDPMNLFAYGDSDGKGLEARLQHPLGVAWD 96

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG--EKGTSQLLNSPWDVCY 723
             K LL+VAD+ NH ++ ID       T AG G  G   +GG  E       N P  +  
Sbjct: 97  HSK-LLFVADSYNHKIKMIDPEERYCATYAGTGEPG---KGGDDEHILKAQFNEPGGLAI 152

Query: 724 KPINEKVYIAMAGQHQI 740
            P   K+Y+A    H I
Sbjct: 153 SPCGCKIYVADTNNHTI 169


>gi|157279030|gb|AAI34672.1| NHLRC2 protein [Bos taurus]
          Length = 376

 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 182/365 (49%), Gaps = 49/365 (13%)

Query: 730  VYIAMAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
            ++IAMAG HQIW           ++    G    F+G G E N N +      FAQPSG+
Sbjct: 6    LWIAMAGTHQIWALLLDCGRLPKKNELKKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGL 65

Query: 779  SLSPD--FMEIYVADSESSSIRALNLKTGGSRLLAGG--DPIFPDNLFKFGDRDGMGSEV 834
            SL+ +  +  ++VADSESS++R ++LK G  + L GG  DP+   NLF FGD DG+G   
Sbjct: 66   SLASEGPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPM---NLFAFGDVDGVGINA 122

Query: 835  LLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLS 892
             LQHPLGV +  K   +YVADSYNHKIK +DP +   +TLAG G A    G++   +  +
Sbjct: 123  RLQHPLGVTWDQKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGNASNMIGSSFTDSTFN 182

Query: 893  EPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE----PELQTLELKGVQPPTPKSRSPKR 947
            EP G+   +NG  L++ADTNN+ I+ LDL  +     P  ++ E   V  P    + PK 
Sbjct: 183  EPGGLCIGENGQLLYVADTNNHQIKVLDLETKTVSVFPVFRS-ENAVVDGPCLAGK-PKT 240

Query: 948  LRR--RSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDP 1005
            L +  +S+P  +   V           L++ LP     ++ A S + +  E    +    
Sbjct: 241  LPKLPKSAPGIRLAPVAASPGQTLQFKLRLDLPSGTKLTEGASSCWFLSAEGNEWL---- 296

Query: 1006 LDGNLSPEGSAVLHFRRMSPSVSTG------------RISCKVYYCKED-EVCLYKPLLF 1052
            L G + P G   +      P++S               IS  +YYC  D   C+ K +LF
Sbjct: 297  LQGQI-PSGE--IESISNQPTISLQIPGDCLSLEAILSISVFLYYCSSDSSACMMKGILF 353

Query: 1053 EVPFQ 1057
              P Q
Sbjct: 354  SQPLQ 358



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 16/177 (9%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKK--NLLYVADTENHALREIDFVNDTVRTLAG 696
           GS  EE   +     A F +P GL+  ++   + L+VAD+E+  +R +   +  V+ L G
Sbjct: 42  GSGNEENRNNAYPHKAGFAQPSGLSLASEGPWSCLFVADSESSTVRTVSLKDGAVKHLVG 101

Query: 697 ------NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
                 N     D  G   G +  L  P  V +      +Y+A +  H+I     VD  T
Sbjct: 102 GERDPMNLFAFGDVDG--VGINARLQHPLGVTWDQKRNLLYVADSYNHKI---KVVDPKT 156

Query: 751 R---AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
           +     +G G   N+ GSS  +++F +P G+ +  +   +YVAD+ +  I+ L+L+T
Sbjct: 157 KNCTTLAGTGNASNMIGSSFTDSTFNEPGGLCIGENGQLLYVADTNNHQIKVLDLET 213



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 1/111 (0%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTD-LDGNFIVQIGS 640
           P+ L    D D     + L+ P  +  D   N L+++DS +++I V D    N     G+
Sbjct: 106 PMNLFAFGDVDGVGINARLQHPLGVTWDQKRNLLYVADSYNHKIKVVDPKTKNCTTLAGT 165

Query: 641 SGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691
                +   SF D+TFN P GL       LLYVADT NH ++ +D    TV
Sbjct: 166 GNASNMIGSSFTDSTFNEPGGLCIGENGQLLYVADTNNHQIKVLDLETKTV 216



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 615 LFISDSNHNRIVVTDL-DGNFIVQIGSSGEE------GLRDGSFDDATFNRPQGLAYNAK 667
           LF++DS  + +    L DG     +G   +       G  DG   +A    P G+ ++ K
Sbjct: 76  LFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINARLQHPLGVTWDQK 135

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +NLLYVAD+ NH ++ +D       TLAG G   +    G   T    N P  +C     
Sbjct: 136 RNLLYVADSYNHKIKVVDPKTKNCTTLAGTGNASNMI--GSSFTDSTFNEPGGLCIGENG 193

Query: 728 EKVYIAMAGQHQI 740
           + +Y+A    HQI
Sbjct: 194 QLLYVADTNNHQI 206


>gi|21618524|gb|AAH32598.1| NHLRC2 protein [Homo sapiens]
 gi|325464307|gb|ADZ15924.1| NHL repeat containing 2 [synthetic construct]
          Length = 367

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 175/360 (48%), Gaps = 47/360 (13%)

Query: 734  MAGQHQIW-----------EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
            MAG HQIW           ++    G    F+G G E N N +      FAQPSG+SL+ 
Sbjct: 1    MAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKAGFAQPSGLSLAS 60

Query: 783  D--FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
            +  +  ++VADSESS++R ++LK G  + L GG+   P NLF FGD DG+G    LQHPL
Sbjct: 61   EDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERD-PMNLFAFGDVDGVGINAKLQHPL 119

Query: 841  GV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA-AQLSEPAGII 898
            GV +  K   +YVADSYNHKIK +DP +   +TLAG G       ++   +  +EP G+ 
Sbjct: 120  GVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFTESTFNEPGGLC 179

Query: 899  EAQNGN-LFIADTNNNIIRYLDLNKEE----PELQT----------LELKGVQPPTPKSR 943
              +NG  L++ADTNN+ I+ +DL  +     P  ++          +E +   P  PKS 
Sbjct: 180  IGENGELLYVADTNNHQIKVMDLETKMVSVLPIFRSENAVVDGPFLVEKQKTLPKLPKSA 239

Query: 944  SPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVII 1003
               RL   ++   QT+             L++ LP     ++   S + +  E    ++ 
Sbjct: 240  PSIRLSPVTACAGQTL----------QFKLRLDLPSGSKLTEGVSSCWFLTAEGNEWLLQ 289

Query: 1004 DPLDG----NLSPEGSAVLHFRRMSPSV-STGRISCKVYYCKED-EVCLYKPLLFEVPFQ 1057
              +      N+S + +  L       S+ +   +S  +YYC  D   C+ K +LF  P Q
Sbjct: 290  GQIAAGDIENISSQPTISLQIPDDCLSLEAIVSVSVFLYYCSADSSACMMKAILFSQPLQ 349



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 615 LFISDSNHNRIVVTDL-DGNFIVQIGSSGEE------GLRDGSFDDATFNRPQGLAYNAK 667
           LF++DS  + +    L DG     +G   +       G  DG   +A    P G+ ++ K
Sbjct: 67  LFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLGVTWDKK 126

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
           +NLLYVAD+ NH ++ +D       TLAG G   ++       T    N P  +C     
Sbjct: 127 RNLLYVADSYNHKIKVVDPKTKNCTTLAGTGD--TNNVTSSSFTESTFNEPGGLCIGENG 184

Query: 728 EKVYIAMAGQHQI 740
           E +Y+A    HQI
Sbjct: 185 ELLYVADTNNHQI 197



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 582 PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSS 641
           P+ L    D D     + L+ P  +  D   N L+++DS +++I V D        +  +
Sbjct: 97  PMNLFAFGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGT 156

Query: 642 GE-EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           G+   +   SF ++TFN P GL       LLYVADT NH ++ +D     V  L
Sbjct: 157 GDTNNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLETKMVSVL 210


>gi|26452042|dbj|BAC43111.1| unknown protein [Arabidopsis thaliana]
          Length = 97

 Score =  152 bits (383), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 75/94 (79%), Positives = 85/94 (90%)

Query: 208 MFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTT 267
           MFDAIVSADAFENLKPAPDIFL+A+KIL VPTSEC+VIEDALAGVQAA+AA MRCIAV T
Sbjct: 1   MFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAAQAANMRCIAVKT 60

Query: 268 TLSEERLKEASPSLIRKEIGSVSLNDILTGGGGS 301
           TLSE  LK+A PS+IR +IG++S+NDILTGG  S
Sbjct: 61  TLSEAILKDAGPSMIRDDIGNISINDILTGGSDS 94


>gi|290978635|ref|XP_002672041.1| predicted protein [Naegleria gruberi]
 gi|284085614|gb|EFC39297.1| predicted protein [Naegleria gruberi]
          Length = 706

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 20/344 (5%)

Query: 598 SPLKFPGKLAIDILNNRLFISD-SNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFD-DA 654
           + L  P  +A++  +N ++I+D  NH    V+ LD N I  I  +G  G   DG     A
Sbjct: 33  AKLSSPYGVAVNPYSNDVYIADYRNHCIRKVSALD-NKITTIAGTGVAGYSGDGGLALHA 91

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
             N P  ++ + K   LY+AD  NH +R+I     T+ T+AGN T G+   GG    +QL
Sbjct: 92  QLNCPLSVSIHPKNEELYIADYSNHRIRKISLTYGTISTVAGNNTGGTSGDGGLALFAQL 151

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN-GSSSLNTSFA 773
              P  V   PI   +YI     ++I   S   G+   F+G+G       G  + N    
Sbjct: 152 Y-FPQCVKIHPITFDIYIIDFVNNKIRRISNSSGIISTFAGNGTAGFCGEGGFATNAQLN 210

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            PSG+  +P   ++Y+ADS +  +R +N K+G    LAG          K G  DG+ ++
Sbjct: 211 GPSGLDFNPTTGDVYIADSNNHRVRKVNCKSGIITTLAGTG--------KAGYSDGIDAQ 262

Query: 834 VLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQ 890
             L +P  V +C +   IYV D  N++I  + P   R++T+ GI + GF    G A+ A+
Sbjct: 263 --LNYPYDVSFCTRGQIIYVTDRSNNRICTVSPIDGRITTVCGINEKGFDGDGGLAINAK 320

Query: 891 LSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELK 933
           +S P  I + A+NG+++ +D  NN IR +  +     L+ L  K
Sbjct: 321 ISSPCQIAVHAKNGDVYFSDFGNNRIRKIVGSYHATLLKPLSFK 364



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 24/284 (8%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           G  G+ GL      +A  + P G+A N   N +Y+AD  NH +R++  +++ + T+AG G
Sbjct: 22  GFYGDNGLAI----EAKLSSPYGVAVNPYSNDVYIADYRNHCIRKVSALDNKITTIAGTG 77

Query: 699 TKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758
             G    GG    +QL N P  V   P NE++YIA    H+I + S   G     +G+  
Sbjct: 78  VAGYSGDGGLALHAQL-NCPLSVSIHPKNEELYIADYSNHRIRKISLTYGTISTVAGN-- 134

Query: 759 ERNLNGSS-----SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG 813
             N  G+S     +L      P  + + P   +IY+ D  ++ IR ++  +G     AG 
Sbjct: 135 --NTGGTSGDGGLALFAQLYFPQCVKIHPITFDIYIIDFVNNKIRRISNSSGIISTFAG- 191

Query: 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVST 872
                +    F    G  +   L  P G+ +    G +Y+ADS NH+++K++  S  ++T
Sbjct: 192 -----NGTAGFCGEGGFATNAQLNGPSGLDFNPTTGDVYIADSNNHRVRKVNCKSGIITT 246

Query: 873 LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNII 915
           LAG GKAG+ DG  + AQL+ P  +     G  +++ D +NN I
Sbjct: 247 LAGTGKAGYSDG--IDAQLNYPYDVSFCTRGQIIYVTDRSNNRI 288



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 112/235 (47%), Gaps = 18/235 (7%)

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749
           T+ T+AGNG KG  Y          L+SP+ V   P +  VYIA    H I + S +D  
Sbjct: 11  TIWTIAGNGIKGF-YGDNGLAIEAKLSSPYGVAVNPYSNDVYIADYRNHCIRKVSALDNK 69

Query: 750 TRAFSGDGYE-RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
               +G G    + +G  +L+     P  +S+ P   E+Y+AD  +  IR ++L  G   
Sbjct: 70  ITTIAGTGVAGYSGDGGLALHAQLNCPLSVSIHPKNEELYIADYSNHRIRKISLTYGTIS 129

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK----NGQIYVADSYNHKIKKLD 864
            +AG +          G   G G   L        C K       IY+ D  N+KI+++ 
Sbjct: 130 TVAGNNT---------GGTSGDGGLALFAQLYFPQCVKIHPITFDIYIIDFVNNKIRRIS 180

Query: 865 PASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIR 916
            +S  +ST AG G AGF  + G A  AQL+ P+G+      G+++IAD+NN+ +R
Sbjct: 181 NSSGIISTFAGNGTAGFCGEGGFATNAQLNGPSGLDFNPTTGDVYIADSNNHRVR 235


>gi|374317073|ref|YP_005063501.1| cytidine deaminase [Sphaerochaeta pleomorpha str. Grapes]
 gi|359352717|gb|AEV30491.1| cytidine deaminase, homotetrameric [Sphaerochaeta pleomorpha str.
           Grapes]
          Length = 390

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 8/212 (3%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           ++ +LFDMDGVL +SE    +AA+  F  +G+ V  EDF PF+G GE  FL GVA  K  
Sbjct: 2   ITGILFDMDGVLIDSEPIILQAAIAYFDSIGIVVKPEDFTPFIGAGERQFLCGVAE-KYH 60

Query: 139 KGFDSEAAKKRFFEIY--LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
           +  D E A+K  F +Y  L   A P  G+        +    + GLK+AVASSA R KV 
Sbjct: 61  ETIDFEKARKALFSLYGELAAEAGPLEGVS-----RFLRNGHNAGLKMAVASSASREKVL 115

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
            NL + G   + FD +VS D     KP PDI+  A+  + + T +C+V+EDAL G+ +AK
Sbjct: 116 MNLVSIGCKETDFDLVVSGDMISRNKPEPDIYQLAALSMGLATQDCLVMEDALNGIVSAK 175

Query: 257 AAQMRCIAVTTTLSEERLKEASPSLIRKEIGS 288
            A+     +TTT +  +L EA   L+   + S
Sbjct: 176 RAKCTVCGLTTTFTVNQLFEAGADLVVSSLDS 207


>gi|325971914|ref|YP_004248105.1| HAD-superfamily hydrolase [Sphaerochaeta globus str. Buddy]
 gi|324027152|gb|ADY13911.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Sphaerochaeta
           globus str. Buddy]
          Length = 388

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 146/303 (48%), Gaps = 25/303 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           +  +LFDMDGVL +SE    +AA+   ++ GV    EDF+PF+GTG+  +L GV    G+
Sbjct: 2   IRGILFDMDGVLIDSEPVILQAAISYLSDRGVTAQPEDFIPFIGTGDRRYLCGVGQKYGL 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
              D E AK  FF  Y +++A  N G   PG    I   +  GLK+A+A+SA ++K   N
Sbjct: 62  S-IDFEEAKHPFFA-YYEQFAI-NRG-PMPGVHRFIANARKAGLKLALATSAMKMKAAIN 117

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           L A GL    FD +V+ D  +  KP PDI+  ++  + + T EC+V+EDAL GVQA KAA
Sbjct: 118 LKAIGLKFEDFDTVVTGDMVKRTKPNPDIYQLSALSMGLSTDECLVVEDALNGVQAGKAA 177

Query: 259 QMRCIAVTTTLSEERLKEASPSLIRKEIGSV-------SLNDILTGGGGSYNE------K 305
                A+  T +   L +A    +   + +          N +L+   GS +       K
Sbjct: 178 HCSVCALEGTFTVTELVDAGADYVLSSLDAFEDFSSLEGFNAVLSSYEGSDDRTVFGANK 237

Query: 306 IQEHE--------LLHAASQNSTALLKEKTDNWSILDTGAADEKGSSTSGLQGSRREILR 357
           I E E        LL  A + +    K     +S+   GA+     +     G   E   
Sbjct: 238 ILEAESVLMGEEALLAFAVEQACKARKNAYTPYSLYKVGASVVSAKTNRVYSGCNVENSS 297

Query: 358 YGS 360
           YG+
Sbjct: 298 YGA 300


>gi|449017726|dbj|BAM81128.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
           10D]
          Length = 924

 Score =  130 bits (327), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 169/376 (44%), Gaps = 60/376 (15%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHN--RIVV-----------------TDLDGNFIVQIGS 640
            ++P  L  D L NRL ++DS +N  RIV                  TD+ G     I  
Sbjct: 523 FQYPQGLVFDPLGNRLIVADSGNNALRIVRFSDGTVSTASVAPLVKETDVQGVMERSISM 582

Query: 641 SGEEGLRDGSFDDATFNRP----QGLAYNAKK------------------NLLYVADTEN 678
              E  R  +   A    P    +G  + A +                   LL VAD + 
Sbjct: 583 QDRESGRHRAAVSAAATEPPAASEGTPFWAWQRRWFKPERTRPAVQRQYEQLLSVADADV 642

Query: 679 HALREIDFVNDTVRTLAGNGTKGSDYQ--GGEKGTSQL---------LNSPWDVCYKPIN 727
                 D  N+T      N   G+ +Q  G    +S L            PWDV  K   
Sbjct: 643 RFAEVNDRSNNTSSAAKSNSKPGTTHQRTGIAANSSPLSLTPSPRSRFRLPWDV--KMHA 700

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS--SSLNTSFAQPSGISLSPDFM 785
             VY+A+AG HQIW   +  G+ R + G G    ++ +  S +  SFA P G+ +    +
Sbjct: 701 GSVYVAVAGSHQIWRLDST-GILREYRGSGKPGLVDDAEGSRVPVSFAAPHGVCVQGTCL 759

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
             YV DS+SS++RA++L+   +R + GGD  F ++L  FGDRDG G    LQ+P G    
Sbjct: 760 --YVTDSDSSTVRAIDLRAQWTRTIVGGDVFFLESLSTFGDRDGWGRGGHLQYPCGCCAL 817

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
            +GQI +AD+ NHKIK L+     V TLAG G+ G  DGA+  A    P GI       +
Sbjct: 818 PDGQILLADTLNHKIKVLNLELRDVRTLAGSGEPGLHDGASTQAAFFAPQGIAYDPTVRM 877

Query: 906 -FIADTNNNIIRYLDL 920
            ++ADT N+ IR +D+
Sbjct: 878 AYVADTYNHCIRQVDV 893



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 1/108 (0%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L+FPGKL +   ++RLFI+DS H+RI+VT L G FI QIG     G RDG+F +A F  P
Sbjct: 467 LRFPGKLDVHAESDRLFIADSGHHRILVTKLSGEFIEQIGGREGAGFRDGTFSEALFQYP 526

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA-GNGTKGSDYQG 706
           QGL ++   N L VAD+ N+ALR + F + TV T +     K +D QG
Sbjct: 527 QGLVFDPLGNRLIVADSGNNALRIVRFSDGTVSTASVAPLVKETDVQG 574



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 52/83 (62%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           + ++ ++D+ +++I V +L+   +  +  SGE GL DG+   A F  PQG+AY+    + 
Sbjct: 819 DGQILLADTLNHKIKVLNLELRDVRTLAGSGEPGLHDGASTQAAFFAPQGIAYDPTVRMA 878

Query: 672 YVADTENHALREIDFVNDTVRTL 694
           YVADT NH +R++D    TVRTL
Sbjct: 879 YVADTYNHCIRQVDVATGTVRTL 901



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 132/330 (40%), Gaps = 57/330 (17%)

Query: 454 KVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRY 513
           K++VL  W          L  LE L + Y D    +V +H+ KFD E+    ++ +   +
Sbjct: 233 KLLVLLLWRATDSGTGAALDVLENL-RPYMDF-IDIVCMHTPKFDGERPPRFVQLSAKYH 290

Query: 514 GISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDL--VEAALLF 571
            ++ P   D  + LWR+LGV  WPT  V+ P  K +   A EG+R     L  V AA+ F
Sbjct: 291 EMNFPYGADVSLRLWRDLGVTVWPTAVVLSPRSKRVL-FAFEGYRALPRILLCVRAAIDF 349

Query: 572 YGKKKLLDNTPLPLSLEKDNDP-----RLFTSPLKFP---GKLAIDILNNRLFISD---- 619
           Y  +++    P   SL  +  P     RL      FP   G L+  + N R  ++     
Sbjct: 350 YFPRRVATQPPPEPSLRSEQLPSGKSARLGAHSDAFPISAGALSELLENRRRALASAEDT 409

Query: 620 -----------------------SNHNRIVV------TDLDGNFIVQIGSSGEEGLRDGS 650
                                  S  +R+         D+ G  I+ +  +  + L    
Sbjct: 410 ASLKEQRSSTRTSKRSSRKRDKASPESRLPTRSPLPPQDVYGRQILALLDTSRQAL---- 465

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
                   P  L  +A+ + L++AD+ +H +       + +  + G   +G+ ++ G   
Sbjct: 466 ----ALRFPGKLDVHAESDRLFIADSGHHRILVTKLSGEFIEQIGGR--EGAGFRDG-TF 518

Query: 711 TSQLLNSPWDVCYKPINEKVYIAMAGQHQI 740
           +  L   P  + + P+  ++ +A +G + +
Sbjct: 519 SEALFQYPQGLVFDPLGNRLIVADSGNNAL 548



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 13/204 (6%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD---GSFDDATFNRPQGLAYNAKKNLL 671
           ++++ +  ++I   D  G  + +   SG+ GL D   GS    +F  P G+    +   L
Sbjct: 703 VYVAVAGSHQIWRLDSTG-ILREYRGSGKPGLVDDAEGSRVPVSFAAPHGVC--VQGTCL 759

Query: 672 YVADTENHALREIDFVNDTVRTLAGNG-----TKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
           YV D+++  +R ID      RT+ G       +  +       G    L  P   C  P 
Sbjct: 760 YVTDSDSSTVRAIDLRAQWTRTIVGGDVFFLESLSTFGDRDGWGRGGHLQYPCGCCALP- 818

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
           + ++ +A    H+I   +      R  +G G E  L+  +S   +F  P GI+  P    
Sbjct: 819 DGQILLADTLNHKIKVLNLELRDVRTLAGSG-EPGLHDGASTQAAFFAPQGIAYDPTVRM 877

Query: 787 IYVADSESSSIRALNLKTGGSRLL 810
            YVAD+ +  IR +++ TG  R L
Sbjct: 878 AYVADTYNHCIRQVDVATGTVRTL 901



 Score = 43.1 bits (100), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN 904
           A++ ++++ADS +H+I     +   +  + G   AGF+DG    A    P G++    GN
Sbjct: 477 AESDRLFIADSGHHRILVTKLSGEFIEQIGGREGAGFRDGTFSEALFQYPQGLVFDPLGN 536

Query: 905 -LFIADTNNNIIRYLDLN 921
            L +AD+ NN +R +  +
Sbjct: 537 RLIVADSGNNALRIVRFS 554


>gi|297722063|ref|NP_001173395.1| Os03g0311300 [Oryza sativa Japonica Group]
 gi|255674457|dbj|BAH92123.1| Os03g0311300, partial [Oryza sativa Japonica Group]
          Length = 100

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 72/85 (84%)

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
            +FGD DG GS+VLLQHPLGV  A + QIYVADSYNHKIK+LDP + +V+T+AG G+AG+
Sbjct: 9   IEFGDHDGTGSDVLLQHPLGVVYASDNQIYVADSYNHKIKRLDPVTRKVTTIAGTGRAGY 68

Query: 882 KDGAALAAQLSEPAGIIEAQNGNLF 906
           KDG AL+AQLSEPAG++E  +GNLF
Sbjct: 69  KDGPALSAQLSEPAGLVEVGDGNLF 93



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 643 EEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGS 702
           E G  DG+  D     P G+ Y A  N +YVAD+ NH ++ +D V   V T+AG G  G 
Sbjct: 10  EFGDHDGTGSDVLLQHPLGVVY-ASDNQIYVADSYNHKIKRLDPVTRKVTTIAGTGRAG- 67

Query: 703 DYQGGEKGTSQL 714
            Y+ G   ++QL
Sbjct: 68  -YKDGPALSAQL 78


>gi|223934991|ref|ZP_03626910.1| NHL repeat containing protein [bacterium Ellin514]
 gi|223896444|gb|EEF62886.1| NHL repeat containing protein [bacterium Ellin514]
          Length = 1064

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 157/321 (48%), Gaps = 20/321 (6%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
            K P  +AIDI NN +F++D+ ++ I      G      GS G  G RDGS  +A F RP
Sbjct: 70  FKAPQAIAIDISNN-VFVADTENHVIRKISCTGIITTLAGSLGTHGSRDGSGTNALFFRP 128

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGEKGTSQLLNSP 718
            G+A +A  N+L VADT N+ +R+I    D V T AG+ G  GS       GT+ L   P
Sbjct: 129 AGIAVDASGNVL-VADTGNNTVRKITATGD-VTTFAGSAGNYGST---DNLGTNALFYRP 183

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
             +     N  +++A  G + I + +    V       G   NL+ +S  N  F+ P G+
Sbjct: 184 TGIAIDNFN-NIFVADTGNNTIRKITPSGNVNTMAGSAGVYGNLD-NSGANALFSGPQGL 241

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
           ++      +YV D+ + +IR +          +G    F  +   +G  +G+G+  L   
Sbjct: 242 TVDSS-GNLYVVDTGNGTIRKI--------TSSGVVTTFAGSAGNYGATNGIGANALFYA 292

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGI 897
           P G+     G +YVAD+ NH I+K+  +   V+TLAG+ G  G  D    +A    P GI
Sbjct: 293 PQGITIDLFGCVYVADTGNHTIRKIT-SDGTVTTLAGLAGNYGSADSVNSSASFWNPQGI 351

Query: 898 IEAQNGNLFIADTNNNIIRYL 918
                GNL+IADT NN IR +
Sbjct: 352 TSDATGNLYIADTGNNTIRTI 372



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 154/364 (42%), Gaps = 62/364 (17%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +AID  NN +F++D+ +N I      GN     GS+G  G  D S  +A F+ PQGL
Sbjct: 183 PTGIAIDNFNN-IFVADTGNNTIRKITPSGNVNTMAGSAGVYGNLDNSGANALFSGPQGL 241

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
             ++  NL YV DT N  +R+I   +  V T AG+        G   G + L  +P  + 
Sbjct: 242 TVDSSGNL-YVVDTGNGTIRKIT-SSGVVTTFAGSAGNYGATNG--IGANALFYAPQGIT 297

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS--FAQPSGISL 780
              +   VY+A  G H I    T DG     +G     N   + S+N+S  F  P GI+ 
Sbjct: 298 ID-LFGCVYVADTGNHTI-RKITSDGTVTTLAG--LAGNYGSADSVNSSASFWNPQGIT- 352

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGG-------DPIFPDNLFKF--------- 824
           S     +Y+AD+ +++IR +    GGS     G       D +  D  F+F         
Sbjct: 353 SDATGNLYIADTGNNTIRTI--TPGGSVTTFAGLPSIGSADGLSSDARFRFPQAVAVDAA 410

Query: 825 --------------------------------GDRDGMGSEVLLQHPLGVYCAKNGQIYV 852
                                           G  + +G+  L   P G+     G IYV
Sbjct: 411 TNVYVADTANQTIRKISPSGLVCTLAGSIGHPGSVNNIGTNALFSGPQGITVDGVGNIYV 470

Query: 853 ADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           AD+ NH I+++ P     +     G +G  +G    AQ   P G+     GN+F+ADT N
Sbjct: 471 ADTLNHIIRRITPDGAATTFAGSAGVSGTANGTNTDAQFYAPQGLAVDGTGNVFVADTFN 530

Query: 913 NIIR 916
           N+IR
Sbjct: 531 NLIR 534



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 38/332 (11%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
            +FP  +A+D   N ++++D+ +  I      G      GS G  G  +    +A F+ P
Sbjct: 399 FRFPQAVAVDAATN-VYVADTANQTIRKISPSGLVCTLAGSIGHPGSVNNIGTNALFSGP 457

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           QG+  +   N+ YVADT NH +R I   +    T AG          G  GT+   N+  
Sbjct: 458 QGITVDGVGNI-YVADTLNHIIRRIT-PDGAATTFAG--------SAGVSGTANGTNTDA 507

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS---------SSLNT 770
              Y P      +A+ G   ++   T + + R  +  G    L G+         ++ N 
Sbjct: 508 QF-YAPQG----LAVDGTGNVFVADTFNNLIRKITPGGAVTTLAGNFENFGSSDGTNSNA 562

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL--AGGDPIFPDNLFKFGDRD 828
            F  PSG+++  +   ++VAD  + +IR L + +G + ++    G   F      +G  D
Sbjct: 563 RFYWPSGVAVD-NAGNVFVADYMNHTIREL-IPSGTNWIVNTVAGLAGF------WGSID 614

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAGI-GKAGFKDGA 885
           G  +      P  +    +G +YVADS NH I+K+ P+     V+T+AG+ G AG  DG 
Sbjct: 615 GTNTSARFFQPRSLSVDASGALYVADSGNHAIRKITPSGTNWVVTTVAGLAGAAGSVDGT 674

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRY 917
            + A+ S PAGI     G +++AD++NN IR+
Sbjct: 675 GINAEFSHPAGISLTSAGIVYVADSDNNTIRF 706



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 146/308 (47%), Gaps = 23/308 (7%)

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673
            L+I+D+ +N I  T   G  +         G  DG   DA F  PQ +A +A  N+ YV
Sbjct: 358 NLYIADTGNNTIR-TITPGGSVTTFAGLPSIGSADGLSSDARFRFPQAVAVDAATNV-YV 415

Query: 674 ADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           ADT N  +R+I   +  V TLAG+ G  GS       GT+ L + P  +    +   +Y+
Sbjct: 416 ADTANQTIRKIS-PSGLVCTLAGSIGHPGSV---NNIGTNALFSGPQGITVDGVGN-IYV 470

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           A    H I    T DG    F+G  G     NG+++ +  F  P G+++      ++VAD
Sbjct: 471 ADTLNHII-RRITPDGAATTFAGSAGVSGTANGTNT-DAQFYAPQGLAVDGT-GNVFVAD 527

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
           + ++ IR +    G    LAG       N   FG  DG  S      P GV     G ++
Sbjct: 528 TFNNLIRKI-TPGGAVTTLAG-------NFENFGSSDGTNSNARFYWPSGVAVDNAGNVF 579

Query: 852 VADSYNHKIKKLDPASNR--VSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
           VAD  NH I++L P+     V+T+AG+ G  G  DG   +A+  +P  +    +G L++A
Sbjct: 580 VADYMNHTIRELIPSGTNWIVNTVAGLAGFWGSIDGTNTSARFFQPRSLSVDASGALYVA 639

Query: 909 DTNNNIIR 916
           D+ N+ IR
Sbjct: 640 DSGNHAIR 647



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 20/300 (6%)

Query: 633 NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692
           NF    G +G  G  +G      F  PQ +A +   N+ +VADTENH +R+I      + 
Sbjct: 48  NFYTLAGYAGR-GSANGISSSVQFKAPQAIAIDISNNV-FVADTENHVIRKIS-CTGIIT 104

Query: 693 TLAGN-GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR 751
           TLAG+ GT GS       GT+ L   P  +     +  V +A  G + +    T  G   
Sbjct: 105 TLAGSLGTHGSR---DGSGTNALFFRPAGIAVDA-SGNVLVADTGNNTV-RKITATGDVT 159

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLA 811
            F+G         +   N  F +P+GI++  +F  I+VAD+ +++IR +   +G    +A
Sbjct: 160 TFAGSAGNYGSTDNLGTNALFYRPTGIAID-NFNNIFVADTGNNTIRKI-TPSGNVNTMA 217

Query: 812 GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS 871
           G   ++       G+ D  G+  L   P G+    +G +YV D+ N  I+K+  +S  V+
Sbjct: 218 GSAGVY-------GNLDNSGANALFSGPQGLTVDSSGNLYVVDTGNGTIRKIT-SSGVVT 269

Query: 872 TLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTL 930
           T AG  G  G  +G    A    P GI     G +++ADT N+ IR +  +     L  L
Sbjct: 270 TFAGSAGNYGATNGIGANALFYAPQGITIDLFGCVYVADTGNHTIRKITSDGTVTTLAGL 329



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 144/321 (44%), Gaps = 27/321 (8%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  + ID+    ++++D+ ++ I     DG      G +G  G  D     A+F  PQG+
Sbjct: 293 PQGITIDLFG-CVYVADTGNHTIRKITSDGTVTTLAGLAGNYGSADSVNSSASFWNPQGI 351

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWD 720
             +A  NL Y+ADT N+ +R I     +V T AG  + GS       G S       P  
Sbjct: 352 TSDATGNL-YIADTGNNTIRTIT-PGGSVTTFAGLPSIGS-----ADGLSSDARFRFPQA 404

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN--GSSSLNTSFAQPSGI 778
           V        VY+A      I + S    V       G+  ++N  G+++L   F+ P GI
Sbjct: 405 VAVDAA-TNVYVADTANQTIRKISPSGLVCTLAGSIGHPGSVNNIGTNAL---FSGPQGI 460

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
           ++      IYVAD+ +  IR +    G +   AG   +        G  +G  ++     
Sbjct: 461 TVD-GVGNIYVADTLNHIIRRI-TPDGAATTFAGSAGVS-------GTANGTNTDAQFYA 511

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLSEPAGI 897
           P G+     G ++VAD++N+ I+K+ P    V+TLAG     G  DG    A+   P+G+
Sbjct: 512 PQGLAVDGTGNVFVADTFNNLIRKITPGG-AVTTLAGNFENFGSSDGTNSNARFYWPSGV 570

Query: 898 IEAQNGNLFIADTNNNIIRYL 918
                GN+F+AD  N+ IR L
Sbjct: 571 AVDNAGNVFVADYMNHTIREL 591


>gi|302338828|ref|YP_003804034.1| HAD-superfamily hydrolase [Spirochaeta smaragdinae DSM 11293]
 gi|301636013|gb|ADK81440.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 232

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 4/207 (1%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEM-GVEVTVEDFLPFMGTGEANFLGGVASVKGVK 139
           AVLFDMDGVL +SE     AA+ +F +    EV  + FLPF+GTGE NF+ GV  +  + 
Sbjct: 9   AVLFDMDGVLVDSERYIAEAAIAMFRQTYNTEVDPKTFLPFVGTGEDNFISGVGKLYNIS 68

Query: 140 GFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANL 199
                  K+R +EIY +        I   GA   +  CK  GL +A+A+SAD+ K+  NL
Sbjct: 69  -LTMPRDKERTYEIYEELVHGHLKEIN--GARAFVYACKRSGLAIAIATSADKRKMMTNL 125

Query: 200 AAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQ 259
              G     FDA V     +N KP P+I+L A++ + +   +C+V+EDA+ G+++ KAA 
Sbjct: 126 RELGFQQEDFDATVHGAEVKNNKPDPEIYLKAAQKVGIDPGDCLVVEDAVRGIESGKAAG 185

Query: 260 MRCIAVTTTLSEERLKEASPSLIRKEI 286
            RC+ +T++   + L  A    +  ++
Sbjct: 186 ARCLGLTSSFDAKALLAAGADYVAADL 212


>gi|289669010|ref|ZP_06490085.1| hypothetical protein XcampmN_11072, partial [Xanthomonas campestris
           pv. musacearum NCPPB 4381]
          Length = 284

 Score =  125 bits (314), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 92/284 (32%), Positives = 139/284 (48%), Gaps = 18/284 (6%)

Query: 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           N + T  +PEFP    WLN  P   +   +G+ +VL F     + C   L +L   + + 
Sbjct: 2   NAQLTQELPEFPT---WLNARPSTLQEH-RGRALVLAFVNASSVWCAERLAELAHWQARS 57

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
                 V+ V   +FD+E+  +     +  +G+S P++ D D   WR  G+ SWPT  ++
Sbjct: 58  PGR-LQVIVVQVPRFDSERVPQRALKQLRGHGVSAPILLDKDWETWRRFGIESWPTLVLL 116

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKF 602
              G+   +L G     DLD  + A  L  G++   D   L    E+  +P L    L+F
Sbjct: 117 DAYGRERQRLVGV--TGDLDKALTA--LCEGQQPPSD-ADLHGVAERGPEPHL---ALRF 168

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA     +RL+++D+ H+R++     G  + Q G  G   L DG   +A F RPQGL
Sbjct: 169 PTGLAAT--EDRLYVADTGHHRVLECTHSGRVLRQFG-HGNADLIDGGVGEAAFRRPQGL 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG 706
           A   +++ LYVADT NHALR I+  +  V TL G G  G   +G
Sbjct: 226 AL--ERDQLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEG 267



 Score = 45.1 bits (105), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 8/93 (8%)

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           +++Y+A  G H++ E +    V R F G G    ++G      +F +P G++L  D  ++
Sbjct: 177 DRLYVADTGHHRVLECTHSGRVLRQF-GHGNADLIDGGVG-EAAFRRPQGLALERD--QL 232

Query: 788 YVADSESSSIRALNLKTGGSRLLAG----GDPI 816
           YVAD+ + ++R +NL++G    L G    G+P+
Sbjct: 233 YVADTGNHALRRINLRSGQVDTLCGTGRSGEPV 265



 Score = 41.2 bits (95), Expect = 3.5,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 24/131 (18%)

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD----GM 830
           P+G++ + D   +YVAD+     R L     G  L            F  G+ D    G+
Sbjct: 169 PTGLAATED--RLYVADTGHH--RVLECTHSGRVL----------RQFGHGNADLIDGGV 214

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD----GAA 886
           G E   + P G+   ++ Q+YVAD+ NH +++++  S +V TL G G++G        +A
Sbjct: 215 G-EAAFRRPQGLALERD-QLYVADTGNHALRRINLRSGQVDTLCGTGRSGEPVEGPLASA 272

Query: 887 LAAQLSEPAGI 897
            A+ L+ P G+
Sbjct: 273 GASALNYPQGL 283



 Score = 40.4 bits (93), Expect = 5.1,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 801 NLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKI 860
           +L    + L  G  P    +L    +R G    + L+ P G+  A   ++YVAD+ +H++
Sbjct: 132 DLDKALTALCEGQQPPSDADLHGVAER-GPEPHLALRFPTGL-AATEDRLYVADTGHHRV 189

Query: 861 KKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
            +    S RV    G G A   DG    A    P G+   +   L++ADT N+ +R ++L
Sbjct: 190 LECT-HSGRVLRQFGHGNADLIDGGVGEAAFRRPQGL-ALERDQLYVADTGNHALRRINL 247


>gi|251771416|gb|EES51995.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 373

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 154/322 (47%), Gaps = 34/322 (10%)

Query: 615 LFISDSNHN---RIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           L+++D+ ++   ++ V+          G +     RDG+   A FN P+GLA ++    L
Sbjct: 70  LYVADTGNDLIRKVTVSGGTATVTTIAGVNHHARFRDGNGTAARFNNPEGLAISSDGKTL 129

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGS-DYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           Y+AD+ N+ +R++D  +  V TLAG    GS D  GG  G       P  +   P  + +
Sbjct: 130 YIADSRNNRIRKMDLSSGAVTTLAGRAFPGSNDGTGGAAG----FYGPRALALTPDGKTL 185

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGD-----GYERNLNGSSSLNTSFAQPSGISLSPDFM 785
           YI+ +G + I +     G     +G      G +  + G++    SF  P GI+LS D  
Sbjct: 186 YISDSGNNMIRKLDVATGTVTTVAGKGALAPGMDDGIGGAA----SFRDPRGIALSSDGS 241

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
            +YVAD+ ++ IR + L T     LA G P FP      G  DG GS      P  V  A
Sbjct: 242 VLYVADTRNNLIRKIVLATNAVSTLA-GHPGFP------GIEDGAGSSAFFNQP--VALA 292

Query: 846 KNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKA------GFKDGAALAAQLSEPAGII 898
            NG  +YV DS N  I+ +D +SN V+T+AG  KA      G  DG  ++  L +  G I
Sbjct: 293 LNGNTLYVGDSSNASIRAIDLSSNNVTTIAGGVKALGMPVSGKTDG-DVSVALFQYTGAI 351

Query: 899 EAQNGNLFIADTNNNIIRYLDL 920
              NG LFIAD     +R L L
Sbjct: 352 AYANGKLFIADIPAETLRELKL 373



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 144/287 (50%), Gaps = 17/287 (5%)

Query: 643 EEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND--TVRTLAGNGTK 700
           E G  DG+   A F   QG+   A    LYVADT N  +R++       TV T+AG    
Sbjct: 43  ERGAVDGTGSQARFEYVQGIVA-APDGTLYVADTGNDLIRKVTVSGGTATVTTIAGVNHH 101

Query: 701 GSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER 760
                G   GT+   N+P  +      + +YIA +  ++I +     G     +G  +  
Sbjct: 102 ARFRDG--NGTAARFNNPEGLAISSDGKTLYIADSRNNRIRKMDLSSGAVTTLAGRAFPG 159

Query: 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN 820
           + +G+      F  P  ++L+PD   +Y++DS ++ IR L++ TG    +AG   + P  
Sbjct: 160 SNDGTGGA-AGFYGPRALALTPDGKTLYISDSGNNMIRKLDVATGTVTTVAGKGALAP-- 216

Query: 821 LFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASNRVSTLAGI-GK 878
               G  DG+G     + P G+  + +G + YVAD+ N+ I+K+  A+N VSTLAG  G 
Sbjct: 217 ----GMDDGIGGAASFRDPRGIALSSDGSVLYVADTRNNLIRKIVLATNAVSTLAGHPGF 272

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEE 924
            G +DGA  +A  ++P  +  A NGN L++ D++N  IR +DL+   
Sbjct: 273 PGIEDGAGSSAFFNQPVAL--ALNGNTLYVGDSSNASIRAIDLSSNN 317



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 8/262 (3%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LAI      L+I+DS +NRI   DL    +  +      G  DG+   A F  P+ L
Sbjct: 117 PEGLAISSDGKTLYIADSRNNRIRKMDLSSGAVTTLAGRAFPGSNDGTGGAAGFYGPRAL 176

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A       LY++D+ N+ +R++D    TV T+AG G        G  G +   + P  + 
Sbjct: 177 ALTPDGKTLYISDSGNNMIRKLDVATGTVTTVAGKGALAPGMDDGIGGAASFRD-PRGIA 235

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLS 781
                  +Y+A    + I +           +G  G+    +G+ S +  F QP  ++L+
Sbjct: 236 LSSDGSVLYVADTRNNLIRKIVLATNAVSTLAGHPGFPGIEDGAGS-SAFFNQPVALALN 294

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
            +   +YV DS ++SIRA++L +     +AGG  +    +   G  DG  S  L Q+  G
Sbjct: 295 GN--TLYVGDSSNASIRAIDLSSNNVTTIAGG--VKALGMPVSGKTDGDVSVALFQYT-G 349

Query: 842 VYCAKNGQIYVADSYNHKIKKL 863
                NG++++AD     +++L
Sbjct: 350 AIAYANGKLFIADIPAETLREL 371


>gi|288574303|ref|ZP_06392660.1| NHL repeat containing protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570044|gb|EFC91601.1| NHL repeat containing protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 465

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 213/483 (44%), Gaps = 62/483 (12%)

Query: 453 GKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLR 512
           G+V VL F+     + + V+  L  L ++ +D    ++G+H  +F  EK+   I + +  
Sbjct: 30  GRVTVLVFFNAMSDDDLSVVDGLMRLREEDRDA-IDLIGIHCPRFPAEKESRRILSILDC 88

Query: 513 YGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572
            GI  PV +D    + +   +N WP+  VV P G L    A EG      +LV   L   
Sbjct: 89  AGIDFPVYDDSRKTIRKAYLINRWPSTVVVDPTGAL--TWAREGILP--PELVRPVLKSM 144

Query: 573 GKKKLLDNTPLPLSLEKDNDPRLFTSPLKF-PGKLAIDILNNRLFISDSNHNRIVVTDLD 631
           G+            L      R   S   F P +LA++   + L + D    R+++  LD
Sbjct: 145 GRTARATG-----DLRPGAQQRFVWSGRSFLPLRLAVE--GDTLAVLDGREKRLLLAQLD 197

Query: 632 GNFIVQIGSSGEEGL--RDGSFDDATFNR-PQGLAYNAKKNLLYVADTENHALREIDFVN 688
            +        G   +  R    D   F   P G + +++K  +YVAD  + ++R  D   
Sbjct: 198 FD--------GRSAVLKRSIPMDRPGFRSCPTGFSLDSEK--IYVADRGSESVRIFDR-- 245

Query: 689 DTVRTLAGNGTKGSDYQGGEKGTSQL----LNSPWDVCYKPINEKVYIAMAGQHQIWEHS 744
                   NG + + Y G    T+ +      +  DV  +  ++ +Y+A  G  QIW  S
Sbjct: 246 --------NGREVASYSGKSSKTNLVGPRSFGAVRDVVCR--DDMLYLASPGTRQIWVQS 295

Query: 745 TVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
              G  R F+       ++    L  +  QP  + LS   + ++ +DS SSSIR ++  T
Sbjct: 296 MSGGGARPFA-GNGGGGMDDGPPLTATMGQPE-VLLSYGNL-LFFSDSGSSSIRCIDPST 352

Query: 805 GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLD 864
           G    L G  P        +G RDG+ S+ LLQ PLG+ C   G +Y+ADSYN +I+ LD
Sbjct: 353 GKVTTLIGEGPSL------YGCRDGIASKALLQRPLGM-CLSGGSLYIADSYNDRIRALD 405

Query: 865 PASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
             S  VST+ G  +           +L  P+  +  ++G +++AD  N  +   D  + E
Sbjct: 406 VRSMEVSTVYGDRR---------WQRLFSPSD-VAIRDGTVYVADLGNGRVVAFDERRGE 455

Query: 925 PEL 927
           PE+
Sbjct: 456 PEV 458


>gi|326386569|ref|ZP_08208191.1| cytochrome c biogenesis protein [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326208884|gb|EGD59679.1| cytochrome c biogenesis protein [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 233

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           VP       W+N+APL  R+DL+GKVV++DFWTY CINC+H LP L+  + KY      +
Sbjct: 75  VPSLDVGGTWINSAPLS-RQDLRGKVVLVDFWTYSCINCLHTLPYLKAWQDKYGKDGLVI 133

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +FD EKDL  +R A+ R+ I++PVV D D  +W       WP    V   G++ 
Sbjct: 134 VGVHAPEFDFEKDLGNVRRAIARFDITYPVVTDNDYRIWNSFSNRYWPAHYFVDAQGRIR 193

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 194 HSHFGEGDYDQSEKVIQQLL 213


>gi|290985668|ref|XP_002675547.1| predicted protein [Naegleria gruberi]
 gi|284089144|gb|EFC42803.1| predicted protein [Naegleria gruberi]
          Length = 1037

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 175/325 (53%), Gaps = 22/325 (6%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL-RDGSFD-DA 654
           ++PL FP  +++    N +FI+DSN++ +     +G      G  G +G   DG    ++
Sbjct: 160 SAPLNFPADVSVHPTTNEVFIADSNNHCVRKILTNGTIFTVAGICGAQGQSSDGGLAINS 219

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQ 713
             N P G+A ++  + +++A+ +N  +R++      + T AGNG  G  + G G+   + 
Sbjct: 220 RLNYPIGVAISSTGD-IFIAERDNSKVRKVSSSTGIISTFAGNGVFG--FMGDGKAAVNA 276

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
            + +P++V +    E  +I+  G  +I + S ++G+     G+ Y ++ +G  + +    
Sbjct: 277 SIYNPYNVAFNSAGE-AFISDYGSGKIRKVS-LNGIITTVVGE-YLQSQDGKLATDVVLN 333

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            P G+++SP   E+Y ADS+  +IR + L +G    +AG        L+ F   +G  S+
Sbjct: 334 TPKGVAISPS-GEVYFADSDKYAIRKITL-SGTIITIAG------SGLYGFAGDNGYSSQ 385

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQL 891
             L +   ++    G+ ++AD+YNH+I+K+D  +  + T+AGI  +GF     LA  A+L
Sbjct: 386 --LSNSYDIFINSLGEAFIADTYNHRIRKID-VNGIIMTIAGIVTSGFSGDGGLATKAEL 442

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIR 916
            EP G++ + +G++FIADT+N  IR
Sbjct: 443 FEPYGVVTSSSGDVFIADTSNCRIR 467



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 173/377 (45%), Gaps = 62/377 (16%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF-DDATF 656
           + L  P K+ +D     +F  +SN NRI +   +G      GS     L DG    +A  
Sbjct: 49  AKLNRPTKIVVDSAGRVVFCDNSN-NRIRMISNNGTISTIAGSGTGFVLGDGGLATNAIL 107

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
           N P GL  N+   +L +ADT N  +R+ID +N  + T+AG+G +G +  GG   TS  LN
Sbjct: 108 NMPTGLTINSIGEIL-IADTSNFKIRKID-LNGIITTIAGSGNQGFEGDGG-LATSAPLN 164

Query: 717 SPWDVCYKPINEKVYIAMAGQH---QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
            P DV   P   +V+IA +  H   +I  + T+  V       G  ++ +G  ++N+   
Sbjct: 165 FPADVSVHPTTNEVFIADSNNHCVRKILTNGTIFTVAGICGAQG--QSSDGGLAINSRLN 222

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF---------------- 817
            P G+++S    +I++A+ ++S +R ++  TG     A G+ +F                
Sbjct: 223 YPIGVAISST-GDIFIAERDNSKVRKVSSSTGIISTFA-GNGVFGFMGDGKAAVNASIYN 280

Query: 818 PDN----------LFKFGD----------------------RDG-MGSEVLLQHPLGVYC 844
           P N          +  +G                       +DG + ++V+L  P GV  
Sbjct: 281 PYNVAFNSAGEAFISDYGSGKIRKVSLNGIITTVVGEYLQSQDGKLATDVVLNTPKGVAI 340

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN 904
           + +G++Y ADS  + I+K+   S  + T+AG G  GF      ++QLS    I     G 
Sbjct: 341 SPSGEVYFADSDKYAIRKI-TLSGTIITIAGSGLYGFAGDNGYSSQLSNSYDIFINSLGE 399

Query: 905 LFIADTNNNIIRYLDLN 921
            FIADT N+ IR +D+N
Sbjct: 400 AFIADTYNHRIRKIDVN 416



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 35/316 (11%)

Query: 616 FISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF-DDATFNRPQGLAYNAKKNLLYVA 674
           FISD    +I    L+G     +G   +   +DG    D   N P+G+A +    + Y A
Sbjct: 293 FISDYGSGKIRKVSLNGIITTVVGEYLQS--QDGKLATDVVLNTPKGVAISPSGEV-YFA 349

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           D++ +A+R+I  ++ T+ T+AG+G  G     G+ G S  L++ +D+    + E  +IA 
Sbjct: 350 DSDKYAIRKIT-LSGTIITIAGSGLYGF---AGDNGYSSQLSNSYDIFINSLGE-AFIAD 404

Query: 735 AGQHQIWEHS------TVDG-VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
              H+I +        T+ G VT  FSGDG         +      +P G+  S    ++
Sbjct: 405 TYNHRIRKIDVNGIIMTIAGIVTSGFSGDG-------GLATKAELFEPYGVVTSSS-GDV 456

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           ++AD+ +  IR ++  TG    +AGG   F DN+        +  +  L  P G+     
Sbjct: 457 FIADTSNCRIRKVSSSTGIITTVAGGTCGFGDNV--------LAVDAQLNTPYGISVNSK 508

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEPAGIIEAQNGNL 905
           G++++AD+ NH+I+K+  +S  +ST+AG G  GF     LA  A L +P+ ++    G +
Sbjct: 509 GELFIADTNNHRIRKV-SSSGFISTIAGNGVGGFSGDGGLATNANLFKPSKVVVNSIGEI 567

Query: 906 FIADTNNNIIRYLDLN 921
           FIAD++ N IR +  N
Sbjct: 568 FIADSSTNRIRKILTN 583



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 150/318 (47%), Gaps = 27/318 (8%)

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFD-DATFNRPQGLAYNAKKNLL 671
            +FISD+ ++RI+    +G   V IG +G  G   DG    +A  NRP  +  ++   ++
Sbjct: 8   EIFISDTANHRILKVLTNGTVEV-IGGNGISGFSGDGELAINAKLNRPTKIVVDSAGRVV 66

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           +  D  N+ +R I   N T+ T+AG+GT G     G   T+ +LN P  +    I E + 
Sbjct: 67  F-CDNSNNRIRMISN-NGTISTIAGSGT-GFVLGDGGLATNAILNMPTGLTINSIGE-IL 122

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS--FAQPSGISLSPDFMEIYV 789
           IA     +I +   ++G+    +G G  +   G   L TS     P+ +S+ P   E+++
Sbjct: 123 IADTSNFKIRKID-LNGIITTIAGSG-NQGFEGDGGLATSAPLNFPADVSVHPTTNEVFI 180

Query: 790 ADSESSSIRALNLKTGGSRL----LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           ADS +  +R +   T G+      + G      D       R        L +P+GV  +
Sbjct: 181 ADSNNHCVRKI--LTNGTIFTVAGICGAQGQSSDGGLAINSR--------LNYPIGVAIS 230

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AALAAQLSEPAGIIEAQNG 903
             G I++A+  N K++K+  ++  +ST AG G  GF  DG AA+ A +  P  +     G
Sbjct: 231 STGDIFIAERDNSKVRKVSSSTGIISTFAGNGVFGFMGDGKAAVNASIYNPYNVAFNSAG 290

Query: 904 NLFIADTNNNIIRYLDLN 921
             FI+D  +  IR + LN
Sbjct: 291 EAFISDYGSGKIRKVSLN 308



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 27/266 (10%)

Query: 609 DILNNRL---FISDSNHNRIVVTDLDGNF-----IVQIGSSGEEGLRDGSFDDATFNRPQ 660
           DI  N L   FI+D+ ++RI   D++G       IV  G SG+ GL       A    P 
Sbjct: 391 DIFINSLGEAFIADTYNHRIRKIDVNGIIMTIAGIVTSGFSGDGGLAT----KAELFEPY 446

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWD 720
           G+  ++  ++ ++ADT N  +R++      + T+AG GT G  +          LN+P+ 
Sbjct: 447 GVVTSSSGDV-FIADTSNCRIRKVSSSTGIITTVAG-GTCG--FGDNVLAVDAQLNTPYG 502

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS-SLNTSFAQPSGIS 779
           +      E ++IA    H+I + S+  G     +G+G          + N +  +PS + 
Sbjct: 503 ISVNSKGE-LFIADTNNHRIRKVSS-SGFISTIAGNGVGGFSGDGGLATNANLFKPSKVV 560

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           ++    EI++ADS ++ IR +   T G+ +   G+    ++ F   + D   S+  L  P
Sbjct: 561 VNS-IGEIFIADSSTNRIRKI--LTNGTIITIAGNG---NSGFNGDEADATNSQ--LGSP 612

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDP 865
            G+  +  G+IY++D  N++I+KL P
Sbjct: 613 YGIALSSTGEIYISDQGNNRIRKLVP 638



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPAGIIEAQNGNL 905
           G+I+++D+ NH+I K+   +  V  + G G +GF  DG  A+ A+L+ P  I+    G +
Sbjct: 7   GEIFISDTANHRILKV-LTNGTVEVIGGNGISGFSGDGELAINAKLNRPTKIVVDSAGRV 65

Query: 906 FIADTNNNIIRYLDLN 921
              D +NN IR +  N
Sbjct: 66  VFCDNSNNRIRMISNN 81


>gi|398808191|ref|ZP_10567059.1| thiol-disulfide isomerase-like thioredoxin [Variovorax sp. CF313]
 gi|398088237|gb|EJL78804.1| thiol-disulfide isomerase-like thioredoxin [Variovorax sp. CF313]
          Length = 190

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  +  L GKVV++DFWTY CINC+  LP +    +KYKD  F VV
Sbjct: 47  PEFAGIDKWLNSEPLTLQ-GLAGKVVLVDFWTYSCINCIRTLPHVVRWYEKYKDQGFVVV 105

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F  EK    +++A+ R+ I +PV  D     WR      WP F +V   G+++ 
Sbjct: 106 GVHSPEFAYEKSTRNVQDAIERFNIRYPVAQDNSFTTWRAYNNQYWPAFYLVDSKGQVMR 165

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q  GEG   +++  +E  L
Sbjct: 166 QHFGEGEYAEMEAAIEVLL 184


>gi|431798813|ref|YP_007225717.1| NHL repeat protein [Echinicola vietnamensis DSM 17526]
 gi|430789578|gb|AGA79707.1| NHL repeat protein [Echinicola vietnamensis DSM 17526]
          Length = 655

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 147/284 (51%), Gaps = 24/284 (8%)

Query: 638 IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
           I  +G  G ++GS   A F+ P+G+A + + N+ +VAD +N+ +R+I    D V T AG 
Sbjct: 338 IAGTGIAGFQNGSSSTAKFDNPEGIAIDQQGNI-FVADRDNNVIRKISSSGD-VSTFAGT 395

Query: 698 GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG-- 755
           G  G  +  G  G ++  NSPW V        V +A  G H I +  T +G     +G  
Sbjct: 396 GIAG--FTDGVAGVAKF-NSPWKVAVDN-QGNVIVADRGNHSIRK-ITPNGTVSTLAGTT 450

Query: 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDP 815
           +GY+   +GS +    F QP+ +++ P+   I +AD+ +  IR ++     S +   G+ 
Sbjct: 451 NGYQ---DGSGN-QAKFDQPTDVAVLPN-GNIVIADNRNHCIRMIDSSVQVSTIAGTGNG 505

Query: 816 IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
                    G  DG GS+    +P G+    NG ++VAD  NH I+K+D   N VST+AG
Sbjct: 506 ---------GYVDGAGSQAQFYYPSGIDTDPNGNLFVADRKNHAIRKIDSYHN-VSTVAG 555

Query: 876 IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
               G ++G    A+  +P G+   QNG + +AD +NN+IR ++
Sbjct: 556 GNGEGIQNGGIAVAKFDDPYGVAVGQNGKVLVADLDNNVIREIN 599



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 165/329 (50%), Gaps = 28/329 (8%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+    P  +AID   N +F++D ++N I      G+ +     +G  G  DG    A F
Sbjct: 353 TAKFDNPEGIAIDQQGN-IFVADRDNNVIRKISSSGD-VSTFAGTGIAGFTDGVAGVAKF 410

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
           N P  +A + + N++ VAD  NH++R+I   N TV TLAG  T G  YQ G  G     +
Sbjct: 411 NSPWKVAVDNQGNVI-VADRGNHSIRKIT-PNGTVSTLAGT-TNG--YQDG-SGNQAKFD 464

Query: 717 SPWDVCYKPINEKVYIAMAGQHQI-WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
            P DV   P N  + IA    H I    S+V   T A +G+G   +  GS +    F  P
Sbjct: 465 QPTDVAVLP-NGNIVIADNRNHCIRMIDSSVQVSTIAGTGNGGYVDGAGSQA---QFYYP 520

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           SGI   P+   ++VAD ++ +IR ++     S  +AGG+          G ++G  +   
Sbjct: 521 SGIDTDPN-GNLFVADRKNHAIRKIDSYHNVS-TVAGGN--------GEGIQNGGIAVAK 570

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
              P GV   +NG++ VAD  N+ I++++   + VST+ G    G+ DG + A++++ P 
Sbjct: 571 FDDPYGVAVGQNGKVLVADLDNNVIREIN--GDYVSTIIGSNGEGYIDGPSTASKMNSPT 628

Query: 896 GIIEAQNGN-LFIADTNNNIIRYLDLNKE 923
            ++   NG+ +  AD  N+++R +  ++E
Sbjct: 629 DVL--VNGDEIIFADYGNHLVRKVVKDEE 655



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 20/229 (8%)

Query: 692 RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ-HQIWEHSTVDGVT 750
            T+AG G  G  +Q G   T++  N P  +    I+++  I +A + + +    +  G  
Sbjct: 336 ETIAGTGIAG--FQNGSSSTAKFDN-PEGIA---IDQQGNIFVADRDNNVIRKISSSGDV 389

Query: 751 RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
             F+G G     +G + +   F  P  +++  +   + VAD  + SIR +    G    L
Sbjct: 390 STFAGTGIAGFTDGVAGV-AKFNSPWKVAVD-NQGNVIVADRGNHSIRKI-TPNGTVSTL 446

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AG            G +DG G++     P  V    NG I +AD+ NH I+ +D +S +V
Sbjct: 447 AG---------TTNGYQDGSGNQAKFDQPTDVAVLPNGNIVIADNRNHCIRMID-SSVQV 496

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           ST+AG G  G+ DGA   AQ   P+GI    NGNLF+AD  N+ IR +D
Sbjct: 497 STIAGTGNGGYVDGAGSQAQFYYPSGIDTDPNGNLFVADRKNHAIRKID 545



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG 884
           G ++G  S     +P G+   + G I+VAD  N+ I+K+  +S  VST AG G AGF DG
Sbjct: 345 GFQNGSSSTAKFDNPEGIAIDQQGNIFVADRDNNVIRKI-SSSGDVSTFAGTGIAGFTDG 403

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            A  A+ + P  +     GN+ +AD  N+ IR +  N
Sbjct: 404 VAGVAKFNSPWKVAVDNQGNVIVADRGNHSIRKITPN 440


>gi|421476490|ref|ZP_15924368.1| redoxin [Burkholderia multivorans CF2]
 gi|400228155|gb|EJO58110.1| redoxin [Burkholderia multivorans CF2]
          Length = 193

 Score =  121 bits (303), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     W N+APL   R L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PEFAGIERWHNSAPLALDR-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + + +A+ R+GI +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAKNVADAIARFGIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEG 556
              GEG
Sbjct: 161 TRYGEG 166


>gi|386399073|ref|ZP_10083851.1| Peroxiredoxin [Bradyrhizobium sp. WSM1253]
 gi|385739699|gb|EIG59895.1| Peroxiredoxin [Bradyrhizobium sp. WSM1253]
          Length = 187

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F    +W N+ PL    DL+GKVV++DFWTY C+NC++ LP +  L  KYKD    VV
Sbjct: 46  PDFTGINNWFNSKPLSLA-DLRGKVVLVDFWTYGCVNCVNTLPHVTELYAKYKDRGLVVV 104

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    ++ A+ R+GI++PV  D D   W       WP   ++  NGK++ 
Sbjct: 105 GVHTPEFPFERSASNVQAALKRHGITYPVAQDNDSRTWNAYSNQYWPAQYIIDQNGKIVF 164

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q AGEG   ++D  V   L
Sbjct: 165 QHAGEGRYDEIDRTVAKLL 183


>gi|374578553|ref|ZP_09651649.1| Peroxiredoxin [Bradyrhizobium sp. WSM471]
 gi|374426874|gb|EHR06407.1| Peroxiredoxin [Bradyrhizobium sp. WSM471]
          Length = 187

 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F    +W N+ PL    DL+GKVV++DFWTY C+NC++ LP +  L  KYKD    VV
Sbjct: 46  PDFTGINNWFNSKPLSLA-DLRGKVVLVDFWTYGCVNCVNTLPHVTDLYAKYKDRGLVVV 104

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    ++ A+ R+GI++PV  D D   W       WP   ++  NGK++ 
Sbjct: 105 GVHTPEFPFERSASNVQAALKRHGITYPVAQDNDSRTWNAYSNQYWPAQYIIDQNGKIVF 164

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q AGEG   ++D  V   L
Sbjct: 165 QHAGEGRYDEIDRTVAKLL 183


>gi|406957726|gb|EKD85600.1| Redoxin protein [uncultured bacterium]
          Length = 580

 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 91/174 (52%), Gaps = 6/174 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF    +WLN+ PL    +L+GKVV++DFWTY CINC+  LP +     KYKD  F VV
Sbjct: 278 PEFVGINNWLNSKPLTMS-ELRGKVVLIDFWTYTCINCIRTLPHVTGWYNKYKDQGFVVV 336

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F+ EKD + + NA+ +Y I +PV  D D   W       WP   ++  NG +  
Sbjct: 337 GVHTPEFEFEKDTKNVENAIKQYKIDYPVAQDNDYATWNAYSNQYWPAKYLIDANGVIRY 396

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG 604
              GEG+  + +  ++  L   GK     N    L   +D  PR   SP  + G
Sbjct: 397 IHFGEGNYDETEKAIQDLLKEAGK-----NVSTSLQEMEDQTPRSQNSPETYLG 445


>gi|330837043|ref|YP_004411684.1| cytidine deaminase [Sphaerochaeta coccoides DSM 17374]
 gi|329748946|gb|AEC02302.1| cytidine deaminase [Sphaerochaeta coccoides DSM 17374]
          Length = 391

 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           ++AVLFDMDGVL +SE   + A +  FA+ GV V   DF  F G GE   L GV      
Sbjct: 2   LTAVLFDMDGVLIDSEPLIQDAMISWFADQGVTVYPRDFKAFFGVGETAMLRGVGGCHDY 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSG--IGFPGALELINQCKSKGLKVAVASSADRIKVD 196
              D + AK   +E    +Y +   G  +  PG L      +  GL  A+ SSADR KV 
Sbjct: 62  VIDDIDTAKLDVYE----RYYRLLEGKDLSHPGILRFFKNARKAGLITAIVSSADRTKVL 117

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
            N+AA  + V   D +VS D  +  KP PDIF  A+  L V   E +V+EDAL GV+AA 
Sbjct: 118 KNMAAVKISVEDVDLVVSGDDVKRKKPFPDIFQYAALSLGVTCDEALVVEDALTGVKAAV 177

Query: 257 AAQMRCIAVTTTLSEERLKEASPSLIRKEIG 287
           AA     AV T+     L E+   L+   +G
Sbjct: 178 AAGCLPGAVATSFDAASLIESGACLVLPHVG 208


>gi|290973007|ref|XP_002669241.1| predicted protein [Naegleria gruberi]
 gi|284082786|gb|EFC36497.1| predicted protein [Naegleria gruberi]
          Length = 747

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 159/312 (50%), Gaps = 18/312 (5%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF-DDATFNRPQGLAYNAKKNLLYV 673
           ++I+D+ ++RI    L+G      G+       DG     A  N P G+A ++   + Y+
Sbjct: 169 IYIADTYNHRIRRIALNGTINTVAGTGDSRFGGDGDLATKAQLNYPMGIAISSTGEI-YI 227

Query: 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIA 733
           ADT N  +R I   N T+ T+AG G  G    G +  T   LN+P  +      E +Y A
Sbjct: 228 ADTFNERIRRIAL-NGTINTIAGTGVLGLSGDG-DLATKAQLNTPRGIAISSTGE-IYFA 284

Query: 734 MAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT--SFAQPSGISLSPDFMEIYVAD 791
                +I   + ++G+    +G G  R   G   L T      P GI++S    EIY+AD
Sbjct: 285 DTSNQRIRRIA-LNGIIDTIAGTGDPR-FGGDGDLATKAQLNSPRGIAISST-GEIYIAD 341

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
           + +  IR + L T  S     G   F  + +  GD  G+ ++ LL  PL V C+ NG+IY
Sbjct: 342 TYNQRIRRIALNTNISTFAGSG---FGYSGY-VGD-GGLSTDALLNTPLSVACSSNGEIY 396

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEPAGIIEAQNGNLFIAD 909
           +AD+YNH+I+K+   +N ++T+AG G +GF     LA  A+LS PA I+   NG ++ +D
Sbjct: 397 IADTYNHRIRKIS-LNNTITTIAGTGDSGFSGDGGLAINARLSSPADIVVNSNGVIYFSD 455

Query: 910 TNNNIIRYLDLN 921
            +NN IR +  N
Sbjct: 456 YDNNRIRKIASN 467



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 25/267 (9%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P  +A+  K  L Y+AD  ++ +R+I+  N+T+ T+ G+ +KG    GG    +++ N P
Sbjct: 52  PNSVAFGLKGEL-YIAD--DYRIRKIE--NNTITTIVGSASKGFSGDGGLSTLAKVQN-P 105

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT--SFAQPS 776
             +      E +++      +I      +G+    +G G  R   G   L T      P 
Sbjct: 106 TGIVVGTRGEILFVDSDRIRKIE-----NGIITTIAGTGDSR-FGGDGDLATKAQLNSPR 159

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           GI++S    EIY+AD+ +  IR + L    + +   GD        +FG    + ++  L
Sbjct: 160 GIAISST-GEIYIADTYNHRIRRIALNGTINTVAGTGDS-------RFGGDGDLATKAQL 211

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEP 894
            +P+G+  +  G+IY+AD++N +I+++   +  ++T+AG G  G      LA  AQL+ P
Sbjct: 212 NYPMGIAISSTGEIYIADTFNERIRRI-ALNGTINTIAGTGVLGLSGDGDLATKAQLNTP 270

Query: 895 AGIIEAQNGNLFIADTNNNIIRYLDLN 921
            GI  +  G ++ ADT+N  IR + LN
Sbjct: 271 RGIAISSTGEIYFADTSNQRIRRIALN 297



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 28/218 (12%)

Query: 711 TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV----TRAFSGDGYERNLNGSS 766
           ++  L +P  V +  +  ++YIA   + +  E++T+  +    ++ FSGDG      G S
Sbjct: 45  STAFLYTPNSVAFG-LKGELYIADDYRIRKIENNTITTIVGSASKGFSGDG------GLS 97

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFG 825
           +L      P+GI +     EI   DS+    R   ++ G    +AG GD        +FG
Sbjct: 98  TL-AKVQNPTGIVVGTR-GEILFVDSD----RIRKIENGIITTIAGTGDS-------RFG 144

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
               + ++  L  P G+  +  G+IY+AD+YNH+I+++   +  ++T+AG G + F    
Sbjct: 145 GDGDLATKAQLNSPRGIAISSTGEIYIADTYNHRIRRI-ALNGTINTVAGTGDSRFGGDG 203

Query: 886 ALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            LA  AQL+ P GI  +  G ++IADT N  IR + LN
Sbjct: 204 DLATKAQLNYPMGIAISSTGEIYIADTFNERIRRIALN 241



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 27/331 (8%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSF-DDATFN 657
           L +P  +AI      ++I+D+ + RI    L+G  I  I  +G  GL  DG     A  N
Sbjct: 211 LNYPMGIAIS-STGEIYIADTFNERIRRIALNGT-INTIAGTGVLGLSGDGDLATKAQLN 268

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTK--GSDYQGGEKGTSQLL 715
            P+G+A ++   + Y ADT N  +R I   N  + T+AG G    G D   G+  T   L
Sbjct: 269 TPRGIAISSTGEI-YFADTSNQRIRRIAL-NGIIDTIAGTGDPRFGGD---GDLATKAQL 323

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV-TRAFSGDGYERNL-NGSSSLNTSFA 773
           NSP  +      E +YIA     +I   +    + T A SG GY   + +G  S +    
Sbjct: 324 NSPRGIAISSTGE-IYIADTYNQRIRRIALNTNISTFAGSGFGYSGYVGDGGLSTDALLN 382

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            P  ++ S +  EIY+AD+ +  IR ++L    + +              F    G+   
Sbjct: 383 TPLSVACSSN-GEIYIADTYNHRIRKISLNNTITTIAG-------TGDSGFSGDGGLAIN 434

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA---ALAAQ 890
             L  P  +    NG IY +D  N++I+K+  ASN + T           G    A+ AQ
Sbjct: 435 ARLSSPADIVVNSNGVIYFSDYDNNRIRKI--ASNGIITTVVGSGVIGSGGDGGLAINAQ 492

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           L+ P GI    N  ++I +   + IR + +N
Sbjct: 493 LNRPYGITFNSNAEMYIVERMGSRIRKVGVN 523



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 153/364 (42%), Gaps = 67/364 (18%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSS-GEEG-LRDGSFD-DATFNRPQGLAYNAKKNLL 671
           ++I+D+ + RI    L+ N     GS  G  G + DG    DA  N P  +A ++   + 
Sbjct: 337 IYIADTYNQRIRRIALNTNISTFAGSGFGYSGYVGDGGLSTDALLNTPLSVACSSNGEI- 395

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           Y+ADT NH +R+I   N+T+ T+AG G  G    G     +  L+SP D+     N  +Y
Sbjct: 396 YIADTYNHRIRKISL-NNTITTIAGTGDSGFSGDG-GLAINARLSSPADIVVNS-NGVIY 452

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
            +    ++I + ++   +T            +G  ++N    +P GI+ + +  E+Y+ +
Sbjct: 453 FSDYDNNRIRKIASNGIITTVVGSGVIGSGGDGGLAINAQLNRPYGITFNSN-AEMYIVE 511

Query: 792 SESSSIRALNLK-----TGGSRLLAGG-------------------------DPIFPDNL 821
              S IR + +        GS + +GG                         + IF D+L
Sbjct: 512 RMGSRIRKVGVNGIITTVAGSDIASGGTTSVGSLATKTVLNAPSKIVINSNNEIIFSDSL 571

Query: 822 ----FKFGDRDGMGSEV--LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
                K G  DG+ S V    + P+G+    +G++Y+AD+    I K+D           
Sbjct: 572 HGRVLKIG-LDGIISGVGNSFRMPIGIAIGSDGEMYIADTSIFAILKID----------- 619

Query: 876 IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
             K G    + +   L  P GI     GN+++ D       Y+ ++K  P  Q    K  
Sbjct: 620 --KKGVL--STIVTGLESPRGITLDSKGNIYVTDL------YV-IHKITPGQQPSPYKST 668

Query: 936 QPPT 939
           QP T
Sbjct: 669 QPDT 672


>gi|377811262|ref|YP_005043702.1| hypothetical protein BYI23_D006690 [Burkholderia sp. YI23]
 gi|357940623|gb|AET94179.1| hypothetical protein BYI23_D006690 [Burkholderia sp. YI23]
          Length = 192

 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 1/145 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F    +W+N+APL  ++ L+GKVV++DFWT+ CINC+H LP ++    +Y+D    VV
Sbjct: 48  PDFAGIDNWVNSAPLDLKQ-LRGKVVLVDFWTFDCINCVHTLPHVKEWYSRYRDKGLVVV 106

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+DL  ++NAV +YGI +PV  D     W       WP   ++  NGK++ 
Sbjct: 107 GVHTPEYTFERDLGNLQNAVKKYGIEYPVAQDNRYATWNAYNNQYWPALYLIDQNGKIVY 166

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKK 575
              GEG     +D +   L    KK
Sbjct: 167 SHFGEGRYAQTEDAIRGLLGLSEKK 191


>gi|300023122|ref|YP_003755733.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524943|gb|ADJ23412.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Hyphomicrobium denitrificans ATCC 51888]
          Length = 578

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 4/160 (2%)

Query: 425 KTTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKK 481
           +T PI    P     +DWLN+ PL    DLKGKVV++DFWTY CINC+  +P +    +K
Sbjct: 256 ETLPIEGRAPALTGAVDWLNSKPLT-PDDLKGKVVLVDFWTYSCINCLRSIPYVRAWAEK 314

Query: 482 YKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAV 541
           YKD    VVGVHS +F  EK++  +RNA+    I++PV  D +  +WR      WP    
Sbjct: 315 YKDQGLVVVGVHSPEFAFEKNVANVRNAISDLKIAYPVAVDNNFAIWRAFKNQYWPAHYF 374

Query: 542 VGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNT 581
           +  NG +     GEG     + +++  L   GK  + D T
Sbjct: 375 IDANGNIRHHHFGEGGYAASERVIQKLLAEAGKANVADGT 414


>gi|387219837|gb|AFJ69627.1| nhl repeat containing 2 [Nannochloropsis gaditana CCMP526]
          Length = 295

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 21/236 (8%)

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHS--TVDGVTRAFSGDGYERNLNGSS----SLNTSF 772
           W V    +N+ +Y+A AG HQIW     T D       G+   R+    +    S  ++F
Sbjct: 62  WPVQLALLNDYLYVAAAGSHQIWRADPYTFDLSPLLGCGECAVRSRTDPNYSDLSSQSAF 121

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL--LAGGDPIFPDNLFKFGDRDGM 830
           A P+GI   P   ++ V+++ESS+IR ++ +   + L  L G D +F  +L  FGD DG 
Sbjct: 122 ASPTGIVALPG--KLLVSEAESSTIREIDFRQREAPLSTLLGNDRLFSRDLSAFGDADGY 179

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL---------DP-ASNRVSTLAGIGKAG 880
              V LQ P+ +         +AD+YNHK+K L         DP A+  VS LAG GK G
Sbjct: 180 ARSVRLQCPMALAGLSASSALLADTYNHKVKVLQAPSGSTPGDPAAAASVSRLAGSGKRG 239

Query: 881 FKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           ++DGA   A+  EP G+ ++ + G  F+ D+NN+ IR +DL   E     ++ KGV
Sbjct: 240 YRDGAGAEAEFDEPRGLCVDGKGGQAFVCDSNNHCIRTVDLRTGEVGTLKIKEKGV 295



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 15/169 (8%)

Query: 537 PTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL--FYGKKKLLDNTPLPLSLEKDNDPR 594
           PT  V  P GKLL   A     +++D     A L    G  +L       LS   D D  
Sbjct: 124 PTGIVALP-GKLLVSEAESSTIREIDFRQREAPLSTLLGNDRLFSRD---LSAFGDADGY 179

Query: 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNF---------IVQIGSSGEEG 645
             +  L+ P  LA    ++ L     NH   V+    G+          + ++  SG+ G
Sbjct: 180 ARSVRLQCPMALAGLSASSALLADTYNHKVKVLQAPSGSTPGDPAAAASVSRLAGSGKRG 239

Query: 646 LRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
            RDG+  +A F+ P+GL  + K    +V D+ NH +R +D     V TL
Sbjct: 240 YRDGAGAEAEFDEPRGLCVDGKGGQAFVCDSNNHCIRTVDLRTGEVGTL 288


>gi|221200231|ref|ZP_03573273.1| redoxin domain protein [Burkholderia multivorans CGD2M]
 gi|221205912|ref|ZP_03578926.1| redoxin domain protein [Burkholderia multivorans CGD2]
 gi|221173924|gb|EEE06357.1| redoxin domain protein [Burkholderia multivorans CGD2]
 gi|221179572|gb|EEE11977.1| redoxin domain protein [Burkholderia multivorans CGD2M]
          Length = 193

 Score =  119 bits (299), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PEFAGIERWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDRGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + + +A+ R+GI +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAKNVADAIARFGIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEG 556
              GEG
Sbjct: 161 TRYGEG 166


>gi|221209273|ref|ZP_03582254.1| redoxin domain protein [Burkholderia multivorans CGD1]
 gi|221169961|gb|EEE02427.1| redoxin domain protein [Burkholderia multivorans CGD1]
          Length = 180

 Score =  119 bits (299), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 29  PEFAGIERWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDRGLVVV 87

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + + +A+ R+GI +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 88  GVHTPEYPFERDAKNVADAIARFGIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 147

Query: 551 QLAGEG 556
              GEG
Sbjct: 148 TRYGEG 153


>gi|161520007|ref|YP_001583434.1| redoxin domain-containing protein [Burkholderia multivorans ATCC
           17616]
 gi|189353811|ref|YP_001949438.1| hypothetical protein BMULJ_05058 [Burkholderia multivorans ATCC
           17616]
 gi|160344057|gb|ABX17142.1| Redoxin domain protein [Burkholderia multivorans ATCC 17616]
 gi|189337833|dbj|BAG46902.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 193

 Score =  119 bits (299), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     W N+APL   R L+GKVV++DFWTY CINC+H +P +    +KY+D    V+
Sbjct: 42  PEFAGIERWHNSAPLTLDR-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVI 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E++ + + +A+ R+GI +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFEREAKNVADAIARFGIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEG 556
              GEG
Sbjct: 161 TRYGEG 166


>gi|421469567|ref|ZP_15918015.1| redoxin [Burkholderia multivorans ATCC BAA-247]
 gi|400229545|gb|EJO59391.1| redoxin [Burkholderia multivorans ATCC BAA-247]
          Length = 193

 Score =  119 bits (298), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PEFAGIDRWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDRGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + + +A+ R+GI +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAKNVADAIARFGIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEG 556
              GEG
Sbjct: 161 TRYGEG 166


>gi|78061249|ref|YP_371157.1| hypothetical protein Bcep18194_B0397 [Burkholderia sp. 383]
 gi|77969134|gb|ABB10513.1| hypothetical protein Bcep18194_B0397 [Burkholderia sp. 383]
          Length = 193

 Score =  119 bits (298), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F     W N+APL   + L+GKVV++DFWTY CINC+H +P ++  ++KY+D    VV
Sbjct: 42  PDFTGIDRWHNSAPLTLGQ-LRGKVVLVDFWTYSCINCIHTIPYVKEWDRKYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D   + +A+ R+GI +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAGNVADAIKRFGIKYPVAQDNRYDTWRAYGNQYWPALYLIDANGKVVY 160

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  +  AL
Sbjct: 161 TRYGEGEYDKTEAAIRGAL 179


>gi|424911651|ref|ZP_18335028.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
           USDA 2370]
 gi|392847682|gb|EJB00205.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
           USDA 2370]
          Length = 592

 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL  R DL+GKVV++DFWTY CINC+  LP +    +KY+D    V+
Sbjct: 278 PSLDGAVEWLNSPPLT-REDLRGKVVLIDFWTYSCINCIRTLPYVRAWAEKYRDQGLVVI 336

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 337 GVHAPEFAFEKKIDNVRQAVAGFKIEYPVAIDNDYRIWRAFDNSYWPAHYLIDAKGQIRY 396

Query: 551 QLAGEGHRKDLDDLVE 566
              GEG  ++ ++ ++
Sbjct: 397 HHFGEGDYRETEEAIQ 412


>gi|373488690|ref|ZP_09579354.1| NHL repeat containing protein [Holophaga foetida DSM 6591]
 gi|372005635|gb|EHP06271.1| NHL repeat containing protein [Holophaga foetida DSM 6591]
          Length = 438

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 156/329 (47%), Gaps = 32/329 (9%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRI--VVTDLDGNFIVQI--GSSGEEGLRDGSFDDAT 655
           L  P  +A+D     L++SD+  + I  +V + DG     +  GS G  G  D S   A+
Sbjct: 118 LYRPFGIAVDSAKT-LYVSDATRHTISKLVPNSDGTVTQSLLAGSDGISGSEDKSGSSAS 176

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           FN P+GLA +A  NL YVAD  NH +R+ID +   V T AG         G     S   
Sbjct: 177 FNSPEGLALDASGNL-YVADYGNHTIRKIDTLG-AVTTFAGQAEASGTVDGDRL--SARF 232

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS-FAQ 774
           N P  + +      +Y+A +G H I   +        F+G        GS   ++S  + 
Sbjct: 233 NHPIGLAFNASYSVLYVADSGNHTIRAINIKSQTVSTFAGTA------GSPGTSSSMLSS 286

Query: 775 PSGISLSP--DFMEIYVADSESSSIRALNLKTGGSRLLAG--GDPIFPDNLFKFGDRDGM 830
           P+G+++S   D   +YV D  SS+IR +   +GG   LAG  GD          G  +G 
Sbjct: 287 PNGVAVSTSDDVDTLYVTDYGSSTIRKIT-SSGGISTLAGYAGDT---------GTANGT 336

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAA 889
           G+      P+G+    +G + VAD+YNH I+K+   S  VSTLAG  G +G +D +   A
Sbjct: 337 GNGARFNQPVGITLHTSGYLLVADAYNHAIRKVS-TSGSVSTLAGESGVSGNEDESGSEA 395

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
             S P+ I    +G  ++ D  N +IR +
Sbjct: 396 HFSRPSNICVDSSGIAYVTDYKNGLIRTI 424



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 26/269 (9%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA+D   N L+++D  ++ I   D  G      G +   G  DG    A FN P GL
Sbjct: 180 PEGLALDASGN-LYVADYGNHTIRKIDTLGAVTTFAGQAEASGTVDGDRLSARFNHPIGL 238

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT-SQLLNSPWDV 721
           A+NA  ++LYVAD+ NH +R I+  + TV T AG          G  GT S +L+SP  V
Sbjct: 239 AFNASYSVLYVADSGNHTIRAINIKSQTVSTFAGT--------AGSPGTSSSMLSSPNGV 290

Query: 722 CYKPIN--EKVYIAMAGQHQIWEHSTVDGVTR--AFSGDGYERNLNGSSSLNTSFAQPSG 777
                +  + +Y+   G   I + ++  G++    ++GD    N  G+ +    F QP G
Sbjct: 291 AVSTSDDVDTLYVTDYGSSTIRKITSSGGISTLAGYAGDTGTANGTGNGA---RFNQPVG 347

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           I+L      + VAD+ + +IR ++  +G    LAG   +        G+ D  GSE    
Sbjct: 348 ITLHTSGY-LLVADAYNHAIRKVS-TSGSVSTLAGESGV-------SGNEDESGSEAHFS 398

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
            P  +    +G  YV D  N  I+ +  A
Sbjct: 399 RPSNICVDSSGIAYVTDYKNGLIRTITTA 427



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVST---LAGI-GKAGFKDGAALAAQL 891
           L  P G+       +YV+D+  H I KL P S+   T   LAG  G +G +D +  +A  
Sbjct: 118 LYRPFGIAVDSAKTLYVSDATRHTISKLVPNSDGTVTQSLLAGSDGISGSEDKSGSSASF 177

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           + P G+    +GNL++AD  N+ IR +D
Sbjct: 178 NSPEGLALDASGNLYVADYGNHTIRKID 205


>gi|291612976|ref|YP_003523133.1| NHL repeat-containing protein [Sideroxydans lithotrophicus ES-1]
 gi|291583088|gb|ADE10746.1| NHL repeat-containing protein [Sideroxydans lithotrophicus ES-1]
          Length = 385

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 162/340 (47%), Gaps = 33/340 (9%)

Query: 597 TSPLKFPGKLAIDILNNRLFISD---SNHNRIVVTDLDGNFIVQIGS-SGEEGLRD---G 649
           T+  + P  +A D  N  L+++D   +N  +IV+    G      GS +G  G+ D   G
Sbjct: 63  TARFQIPAYIASDGTN--LYVTDMYANNIRKIVIAT--GQVTTFAGSITGASGVTDAPSG 118

Query: 650 SFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGE 708
               A FN P G+  +A    LYVAD  NH +R+I      V TLAG  GT GS     +
Sbjct: 119 PGTSALFNNPYGIVIDATNTKLYVADGYNHTIRQIVIATGVVTTLAGTVGTPGS----AD 174

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI--WEHSTVDGVTRAFSG----DGYERNL 762
             T  L +  + +    I   +Y+A +    I   + ++        +G     GY   L
Sbjct: 175 NATGTLASFRYPMGLSRIGTNLYVADSSNSTIRQIDLASASAAVTTLAGTPPSTGYFNGL 234

Query: 763 NGSSSLNTSFAQPSGISL-SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
            G+SS+   F  P+ I+     F+  Y+ D+ ++ +R +++ TG + L+AGG+     + 
Sbjct: 235 TGASSV---FYSPTSIATDGASFL--YLTDTLNNDVRRIDVSTGATTLVAGGNSTLASS- 288

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA-G 880
              G  DG+G+      P+G+       +YVAD+ NH I+K+  A+  V+T AG     G
Sbjct: 289 -GVGSSDGIGANARFNQPMGI-TTDGSNLYVADTNNHTIRKIVIATGNVTTPAGAALVPG 346

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
             DGA   A+ + P GII   NG L++AD  N  IR + L
Sbjct: 347 TADGAGPTARFNHPFGIIYI-NGALYVADYTNGSIRKVQL 385



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 15/166 (9%)

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAG---GDPIFPDNLFKFGDRDGMGSEVLL 836
           ++ D   +YV D  +++IR + + TG     AG   G     D         G G+  L 
Sbjct: 72  IASDGTNLYVTDMYANNIRKIVIATGQVTTFAGSITGASGVTD------APSGPGTSALF 125

Query: 837 QHPLGVYC-AKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGA-ALAAQLSE 893
            +P G+   A N ++YVAD YNH I+++  A+  V+TLAG +G  G  D A    A    
Sbjct: 126 NNPYGIVIDATNTKLYVADGYNHTIRQIVIATGVVTTLAGTVGTPGSADNATGTLASFRY 185

Query: 894 PAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPT 939
           P G+      NL++AD++N+ IR +DL      + TL   G  P T
Sbjct: 186 PMGLSRIGT-NLYVADSSNSTIRQIDLASASAAVTTLA--GTPPST 228


>gi|383774999|ref|YP_005454068.1| hypothetical protein S23_67800 [Bradyrhizobium sp. S23321]
 gi|381363126|dbj|BAL79956.1| hypothetical protein S23_67800 [Bradyrhizobium sp. S23321]
          Length = 187

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F    +W N+ PL    DL+GKVV++DFWTY C+NC++ LP +  L  KYKD    V+
Sbjct: 46  PDFTGITNWFNSKPLGIA-DLRGKVVLVDFWTYGCVNCVNTLPHVTDLYAKYKDKGLVVI 104

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    ++ A+ R+GI++PV  D +   W       WP   ++  NGK++ 
Sbjct: 105 GVHTPEFPFERSASNVQAALKRHGITYPVAQDNESKTWNAYSNQYWPAQYIIDQNGKIVF 164

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q AGEG   ++D  V   L
Sbjct: 165 QHAGEGRYDEIDRTVAKLL 183


>gi|114566902|ref|YP_754056.1| hypothetical protein Swol_1378 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337837|gb|ABI68685.1| hypothetical protein Swol_1378 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 1030

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 179/344 (52%), Gaps = 35/344 (10%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRDGSFD 652
           L +P  LA D  N  L+I+D+++ R+       ++T + GN     G+SG  G   GS  
Sbjct: 506 LNYPHGLAFD-GNGNLYIADASNRRVRKIDSAGIITTVAGN-----GTSGYSG-DGGSAI 558

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG-- 710
            A    P G+A+++  N+ Y+AD  NH +R++D     + T+AGNG     Y+ G  G  
Sbjct: 559 AAKITCPYGVAFDSNGNM-YIADIFNHRIRKVDPAG-IISTVAGNGVLTGSYKSGYSGDG 616

Query: 711 ---TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG-YERNLNGSS 766
              TS  LN P+ V +   +  +YIA +  H I +  T+ G+    +G+G Y  + +G  
Sbjct: 617 GSATSAQLNYPYGVAFDA-SGNMYIADSNNHCIRKVDTL-GIISTAAGNGTYGYSGDGGP 674

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG----GDPIFPDNLF 822
           + +     P+G+S   +   +Y+AD+ +  IR ++   G    +AG    GD    D  +
Sbjct: 675 ATSAQLNNPNGLSF-DNRGNMYIADTYNHRIRMVD-PNGVISTVAGNGNSGDRYGNDGGY 732

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG-F 881
             GD  G+ +   L +P G+    +G +Y+ADS N+ I+K+D  S  +ST AG G +G F
Sbjct: 733 S-GD-GGLATSAQLNNPNGITFDSSGNMYIADSNNNCIRKVDH-SGMISTFAGNGTSGHF 789

Query: 882 KDGA-ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
            DG  A +AQL  P G+    +GNLFIAD  ++ IR + L  ++
Sbjct: 790 GDGGPATSAQLRNPVGVALDNSGNLFIADYFDHSIRKVVLAAQQ 833



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 156/317 (49%), Gaps = 41/317 (12%)

Query: 622 HNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHAL 681
            N  +++ + GN     G SG+ GL       A  N P GLA++   NL Y+AD  N  +
Sbjct: 478 QNTGIISTVAGNGTA--GYSGDGGLAA----SALLNYPHGLAFDGNGNL-YIADASNRRV 530

Query: 682 REIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW 741
           R+ID     + T+AGNGT G    GG    +  +  P+ V +   N  +YIA    H+I 
Sbjct: 531 RKIDSAG-IITTVAGNGTSGYSGDGGSA-IAAKITCPYGVAFDS-NGNMYIADIFNHRIR 587

Query: 742 EHSTVD--GVTRAFSGDG-----YERNL--NGSSSLNTSFAQPSGISLSPDFMEIYVADS 792
           +   VD  G+    +G+G     Y+     +G S+ +     P G++       +Y+ADS
Sbjct: 588 K---VDPAGIISTVAGNGVLTGSYKSGYSGDGGSATSAQLNYPYGVAFDAS-GNMYIADS 643

Query: 793 ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYV 852
            +  IR ++  T G    A G+       + +    G  +   L +P G+     G +Y+
Sbjct: 644 NNHCIRKVD--TLGIISTAAGN-----GTYGYSGDGGPATSAQLNNPNGLSFDNRGNMYI 696

Query: 853 ADSYNHKIKKLDPASNRVSTLAGIGKAGFK----------DGAALAAQLSEPAGIIEAQN 902
           AD+YNH+I+ +DP +  +ST+AG G +G +           G A +AQL+ P GI    +
Sbjct: 697 ADTYNHRIRMVDP-NGVISTVAGNGNSGDRYGNDGGYSGDGGLATSAQLNNPNGITFDSS 755

Query: 903 GNLFIADTNNNIIRYLD 919
           GN++IAD+NNN IR +D
Sbjct: 756 GNMYIADSNNNCIRKVD 772



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 9/234 (3%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
           + T+AGNGT G    GG    S LLN P  + +   N  +YIA A   ++ +  +  G+ 
Sbjct: 483 ISTVAGNGTAGYSGDGGLA-ASALLNYPHGLAFDG-NGNLYIADASNRRVRKIDSA-GII 539

Query: 751 RAFSGDGYE-RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
              +G+G    + +G S++      P G++   +   +Y+AD  +  IR ++   G    
Sbjct: 540 TTVAGNGTSGYSGDGGSAIAAKITCPYGVAFDSN-GNMYIADIFNHRIRKVD-PAGIIST 597

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR 869
           +AG   +       +    G  +   L +P GV    +G +Y+ADS NH I+K+D     
Sbjct: 598 VAGNGVLTGSYKSGYSGDGGSATSAQLNYPYGVAFDASGNMYIADSNNHCIRKVDTLG-I 656

Query: 870 VSTLAGIGKAGFKD--GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           +ST AG G  G+    G A +AQL+ P G+     GN++IADT N+ IR +D N
Sbjct: 657 ISTAAGNGTYGYSGDGGPATSAQLNNPNGLSFDNRGNMYIADTYNHRIRMVDPN 710



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 36/294 (12%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGS--SGEEGLRDGS 650
           +  P  +A D  N  ++I+D  ++RI       +++ + GN ++  GS  SG  G   GS
Sbjct: 562 ITCPYGVAFD-SNGNMYIADIFNHRIRKVDPAGIISTVAGNGVLT-GSYKSGYSG-DGGS 618

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
              A  N P G+A++A  N+ Y+AD+ NH +R++D +   + T AGNGT G    GG   
Sbjct: 619 ATSAQLNYPYGVAFDASGNM-YIADSNNHCIRKVDTLG-IISTAAGNGTYGYSGDGGPA- 675

Query: 711 TSQLLNSPWDVCYKPINEKVYIAMAGQHQI------WEHSTVDGVTRAFSGDGY--ERNL 762
           TS  LN+P  + +      +YIA    H+I         STV G     SGD Y  +   
Sbjct: 676 TSAQLNNPNGLSFDN-RGNMYIADTYNHRIRMVDPNGVISTVAG--NGNSGDRYGNDGGY 732

Query: 763 NGSSSLNTS--FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN 820
           +G   L TS     P+GI+       +Y+ADS ++ IR ++     S     G       
Sbjct: 733 SGDGGLATSAQLNNPNGITFDSS-GNMYIADSNNNCIRKVDHSGMISTFAGNGTS----- 786

Query: 821 LFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
              FGD  G  +   L++P+GV    +G +++AD ++H I+K+  A+ + ST++
Sbjct: 787 -GHFGD-GGPATSAQLRNPVGVALDNSGNLFIADYFDHSIRKVVLAAQQNSTIS 838


>gi|311108653|ref|YP_003981506.1| alkyl hydroperoxide reductase [Achromobacter xylosoxidans A8]
 gi|310763342|gb|ADP18791.1| AhpC/TSA family protein 11 [Achromobacter xylosoxidans A8]
          Length = 570

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 104/221 (47%), Gaps = 15/221 (6%)

Query: 389 VLFGVNRPSF--------EQTEGGSSQSERIQQFVNYISDVENRKTTPIV----PEFPAK 436
           VL GV  P+           +  G+++ E  QQ V  +   E  +  P V       P  
Sbjct: 203 VLAGVTLPALGWNPALLSSASAPGAARLE--QQLVEQLRPSEPAQAAPRVNGPLASLPDA 260

Query: 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
             WLN+ PL    DL GK+V++DFWTY CINC+  LP L+    KYKD    V+GVH+ +
Sbjct: 261 RGWLNSGPLS-ATDLDGKIVLVDFWTYSCINCLRTLPYLKTWHDKYKDAGLEVIGVHTPE 319

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F  EK    +R AV   GI +PV  D +  +WR     SWP F ++   G+L   +AGE 
Sbjct: 320 FAFEKSPANVRRAVADLGIQYPVAQDNEFKIWRAFRNQSWPAFYLLDGQGRLRYTVAGEH 379

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFT 597
                + +++  L   G+        LP +   +  P+  T
Sbjct: 380 DYAQTERMIQRLLAEAGRTLPDSGVALPAAHGVEAPPQWST 420


>gi|398824149|ref|ZP_10582492.1| Peroxiredoxin [Bradyrhizobium sp. YR681]
 gi|398225173|gb|EJN11452.1| Peroxiredoxin [Bradyrhizobium sp. YR681]
          Length = 187

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F    +W N+ PL    DL+GKVV++DFWTY C+NC++ LP +  L  KYKD    VV
Sbjct: 46  PDFTGINNWFNSKPLSLA-DLRGKVVLVDFWTYGCVNCVNTLPHVTDLYAKYKDKGLVVV 104

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    ++ A+ R+GI++PV  D D   W       WP   ++  +GK++ 
Sbjct: 105 GVHTPEFPFERSASNVQAALKRHGITYPVAQDNDSKTWNAYSNQYWPAQYIIDQSGKIVF 164

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q AGEG   ++D  V   L
Sbjct: 165 QHAGEGRYDEIDRTVARLL 183


>gi|402567967|ref|YP_006617311.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia cepacia
           GG4]
 gi|402249164|gb|AFQ49617.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia cepacia
           GG4]
          Length = 193

 Score =  118 bits (296), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 2/143 (1%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           TP  P+F     W N+APL+  + L+GKVV++DFWTY CINC+H +P +    +KY+D  
Sbjct: 39  TP-APDFTGIDRWHNSAPLKLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNEWYRKYRDQG 96

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             VVGVH+ ++  E+D + + +A+ R+GI +PV  D   + WR  G   WP   ++  NG
Sbjct: 97  LVVVGVHTPEYPFERDAKNVADALKRFGIQYPVAQDNRYDTWRAYGNQYWPALYLIDANG 156

Query: 547 KLLAQLAGEGHRKDLDDLVEAAL 569
           K++    GEG     +  +  AL
Sbjct: 157 KVVYTRYGEGGYDKTEAAIRGAL 179


>gi|116749588|ref|YP_846275.1| NHL repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698652|gb|ABK17840.1| NHL repeat containing protein [Syntrophobacter fumaroxidans MPOB]
          Length = 1750

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 164/313 (52%), Gaps = 21/313 (6%)

Query: 612 NNRLFISDSNHNRIV-VTDLDGNFIVQIGSSGEEGLRDG-SFDDATFNRPQGLAYNAKKN 669
           NN L+I+D+ + RI  VTD   N +   G  G   L DG     A    P  LA +++ N
Sbjct: 273 NNDLYIADTYNQRIRKVTDGVINTVAGTGYGGS--LEDGIPATGARLKSPVALAVDSQNN 330

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           + Y+ADT +H +R +D   + V T+AG G  G+   GG+   + +L SP  +   P N  
Sbjct: 331 I-YIADTYSHRIRRVDAAGNIV-TVAGKGVPGNAGDGGQA-VAAILKSPHGLALGPDN-S 386

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           +YIA    H++ +  T  GV    +G G E  + +G+++   +   P  +++ P    +Y
Sbjct: 387 LYIADRTDHRVRK-VTAAGVISTLAGTGEEGLSADGAAAAFANLDGPCAVAVGPS-GSVY 444

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
            +DS S+ +R + L  G    +AG        +  +   DG  +E  L +P  +    + 
Sbjct: 445 FSDSGSNRVRKIGLD-GNLSTVAG------KGVAGYSGDDGPAAEARLNNPSAIAVDGSE 497

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPAGIIEAQNGNLF 906
            IY+AD+ NH+I+K+D     ++T+AG G  G+  DGA A AA L+ P G+    +GN+F
Sbjct: 498 SIYIADTNNHRIRKVD-GGGTITTVAGNGTPGYSGDGASATAASLNFPNGVAVDADGNVF 556

Query: 907 IADTNNNIIRYLD 919
           IADT+N+ +R +D
Sbjct: 557 IADTSNHRVRMVD 569



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 186/377 (49%), Gaps = 31/377 (8%)

Query: 567 AALLFYG---KKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHN 623
           A LLF G    ++++D       L+ D+ P L  + L  P  +A+D   N +++SD+N++
Sbjct: 5   AILLFPGPSSAERVVDTV---AGLQSDDGPALEAN-LDSPSGVAVDTSGN-VYLSDTNNH 59

Query: 624 RIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFNRPQGLAYNAKKNLLYVADTENHAL 681
           RI   D+    I  +      G     G+   A  NRP+G+A +A  N+ Y AD+ NH +
Sbjct: 60  RIRKLDVAAGQIQTLAGGQSPGYSGDGGTAAKAGLNRPRGIAVDAAGNV-YFADSNNHCI 118

Query: 682 REIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW 741
           R+ID  +  + T+AG G+ GS+  GG   +++L   P+ +   P +  +Y+A  G H++ 
Sbjct: 119 RKID-TSGIITTVAGTGSAGSNGDGGPAASARLA-YPFGIAVDP-SGNIYVADLGNHKVR 175

Query: 742 EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALN 801
                  ++         R  +G  +       P+G+++      ++++DS    IR ++
Sbjct: 176 RIDAAGNISTVAGTGLLSRLGDGGPATEAGLTSPTGVAVD-GSGNLFISDSGRHVIRRVD 234

Query: 802 LKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIK 861
           +  GG+      D +  D   ++    G      L +  GV    N  +Y+AD+YN +I+
Sbjct: 235 V--GGTI-----DRVAGDYEQRYHGDGGPALSAGLMNAYGVALGPNNDLYIADTYNQRIR 287

Query: 862 KLDPASNRVSTLAGIGKAG-FKDG-AALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYL 918
           K+      ++T+AG G  G  +DG  A  A+L  P  + +++QN N++IADT ++ IR +
Sbjct: 288 KV--TDGVINTVAGTGYGGSLEDGIPATGARLKSPVALAVDSQN-NIYIADTYSHRIRRV 344

Query: 919 DLNKEEPELQTLELKGV 935
           D       + T+  KGV
Sbjct: 345 DAAG---NIVTVAGKGV 358



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 35/328 (10%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN-- 657
           LK P  LA+   +N L+I+D   +R+      G  I  +  +GEEGL       A  N  
Sbjct: 373 LKSPHGLALG-PDNSLYIADRTDHRVRKVTAAG-VISTLAGTGEEGLSADGAAAAFANLD 430

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL-LN 716
            P  +A     ++ Y +D+ ++ +R+I   +  + T+AG G  G  Y G +   ++  LN
Sbjct: 431 GPCAVAVGPSGSV-YFSDSGSNRVRKIGL-DGNLSTVAGKGVAG--YSGDDGPAAEARLN 486

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDG----VTRAFSGD-GYERNLNGSSSLNTS 771
           +P  +     +E +YIA    H+I +   VDG     T A +G  GY  +  G+S+   S
Sbjct: 487 NPSAIAVDG-SESIYIADTNNHRIRK---VDGGGTITTVAGNGTPGYSGD--GASATAAS 540

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGM 830
              P+G+++  D   +++AD+ +  +R ++  +G    +AG G P +       GD  G 
Sbjct: 541 LNFPNGVAVDAD-GNVFIADTSNHRVRMVD--SGVITTVAGNGTPGYS------GD-GGA 590

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALA 888
                L+ P GV+    G +Y+AD++N++++K+  A   + T+AG G  G+    G A A
Sbjct: 591 AVSASLKAPHGVWVDATGALYIADAHNYRVRKV--AGGNIVTVAGTGTPGYSGDGGLAAA 648

Query: 889 AQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           A      G++   +GNLF+AD  N+ +R
Sbjct: 649 ADFRSVHGLVVDGSGNLFVADMENSRVR 676


>gi|255531264|ref|YP_003091636.1| NHL repeat containing protein [Pedobacter heparinus DSM 2366]
 gi|255344248|gb|ACU03574.1| NHL repeat containing protein [Pedobacter heparinus DSM 2366]
          Length = 439

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 142/288 (49%), Gaps = 42/288 (14%)

Query: 642 GEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG 701
           G  GL +G+  DA F  P+GLA +A+ N++ VAD +NH +R+I      V T+AG+GT G
Sbjct: 126 GTAGLFNGAAADAQFRNPEGLAVDAQGNVI-VADRQNHTIRKISPAGQ-VTTIAGDGTAG 183

Query: 702 SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN 761
             Y  G  GT+   +SPW +   P+   + +A     +I          R  + DG    
Sbjct: 184 --YADGT-GTAAKFSSPWKLAIDPLGN-IIVADRDNFKI----------RKIAPDGAVTT 229

Query: 762 LNGSSSLNTSFAQPSGISLSPDFME-----------IYVADSESSSIRALNLKTGGSRLL 810
           L GS++    FA  +G   +  FM+           IYVAD+ +  IR ++  +G    L
Sbjct: 230 LAGSTA---GFADGTG--SAAKFMQPLDVVADAQGNIYVADNTAHRIRKVS-PSGTVTTL 283

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AG            G  D  G +   ++P G+   + G I VAD  NH+I+K+ PA   V
Sbjct: 284 AGDG--------TAGYLDATGVQAKFRNPSGLTVDQQGNIIVADRLNHRIRKITPAGT-V 334

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           ST+AG G  G  DG AL A+ ++P G+     GN+ +A+  N  IR +
Sbjct: 335 STIAGAGTTGLLDGDALTAKFADPYGVAVDAGGNILVAELTNARIRKI 382



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 104/228 (45%), Gaps = 18/228 (7%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
           V T AG+GT G     G    +Q  N P  +        V +A    H I + S    VT
Sbjct: 119 VSTFAGDGTAG--LFNGAAADAQFRN-PEGLAVDA-QGNVIVADRQNHTIRKISPAGQVT 174

Query: 751 RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
              +GDG     +G+ +    F+ P  +++ P    I VAD ++  IR +    G    L
Sbjct: 175 -TIAGDGTAGYADGTGTA-AKFSSPWKLAIDP-LGNIIVADRDNFKIRKI-APDGAVTTL 230

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AG    F D         G GS      PL V     G IYVAD+  H+I+K+ P S  V
Sbjct: 231 AGSTAGFAD---------GTGSAAKFMQPLDVVADAQGNIYVADNTAHRIRKVSP-SGTV 280

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           +TLAG G AG+ D   + A+   P+G+   Q GN+ +AD  N+ IR +
Sbjct: 281 TTLAGDGTAGYLDATGVQAKFRNPSGLTVDQQGNIIVADRLNHRIRKI 328


>gi|330820703|ref|YP_004349565.1| Redoxin domain protein [Burkholderia gladioli BSR3]
 gi|327372698|gb|AEA64053.1| Redoxin domain protein [Burkholderia gladioli BSR3]
          Length = 183

 Score =  117 bits (294), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 1/132 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN  P    + L+GKVV++DFWTY CINC+H LP ++    KYK    TVV
Sbjct: 42  PEFTGINQWLNGPPQSLDK-LRGKVVLVDFWTYTCINCIHTLPHVQGWYDKYKSQGLTVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E     +R+A+ R+G+++PV  D D   WR      WP   ++   G+++ 
Sbjct: 101 GVHTPEYPFEHSTSNVRDAIKRFGLTYPVAQDNDYATWRAYDNQYWPAVYLIDKTGRIVY 160

Query: 551 QLAGEGHRKDLD 562
           +  GEGH +  D
Sbjct: 161 RHFGEGHYEQTD 172


>gi|319794092|ref|YP_004155732.1| redoxin domain-containing protein [Variovorax paradoxus EPS]
 gi|315596555|gb|ADU37621.1| Redoxin domain protein [Variovorax paradoxus EPS]
          Length = 166

 Score =  117 bits (294), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  +  L GKVV++DFWTY CINC+  LP +    + YKD  F VV
Sbjct: 23  PEFAGIEKWLNSGPLTMQ-GLAGKVVLVDFWTYTCINCIRTLPHVVRWYETYKDQGFVVV 81

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F  E+    +++A+ R+ I +PV  D     W+      WP F +V   G+++ 
Sbjct: 82  GVHSPEFAYERSTRNVQDAIERFNIRYPVAQDNGFTTWKAYNNQYWPAFYLVDAKGQVMR 141

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q  GEG   +++  ++A L
Sbjct: 142 QHFGEGECAEMEAAIQALL 160


>gi|209521224|ref|ZP_03269946.1| Redoxin domain protein [Burkholderia sp. H160]
 gi|209498337|gb|EDZ98470.1| Redoxin domain protein [Burkholderia sp. H160]
          Length = 179

 Score =  117 bits (294), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 1/146 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           + + P  PEF     WLN+ PL+ ++ L+GKVV++DFWTY CINC + LP ++   +KYK
Sbjct: 31  QDSGPPAPEFTGITQWLNSEPLKLQQ-LRGKVVLVDFWTYSCINCANTLPYVKSWNQKYK 89

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D   TV+GVH+ ++  E+D   ++ A+ R GIS+PV  D     W       WP F ++ 
Sbjct: 90  DQGLTVIGVHTPEYPFERDTGNVKTALKRLGISYPVAQDNQYATWNAYNNQYWPAFYLID 149

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAAL 569
             G+++    GEG     +  ++A L
Sbjct: 150 KKGQIVYSHFGEGDYAQTEAKIQALL 175


>gi|186470486|ref|YP_001861804.1| redoxin domain-containing protein [Burkholderia phymatum STM815]
 gi|184196795|gb|ACC74758.1| Redoxin domain protein [Burkholderia phymatum STM815]
          Length = 186

 Score =  117 bits (294), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  ++ L+GKVV++DFWTY CINC+H LP +E L +KYKD    V+
Sbjct: 42  PEFTGINQWLNSRPLTMQQ-LRGKVVLVDFWTYTCINCVHTLPHVEKLYEKYKDQGLVVI 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E++ + +  A+  YG+ +PV  D     W   G   WP   ++   G ++ 
Sbjct: 101 GVHTPEYAFERETKKVSAAIAEYGLHYPVAQDNSYATWNAYGNQYWPAVYLIDKQGHIVY 160

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG    +D  V   L
Sbjct: 161 SHFGEGDYDQIDAAVREQL 179


>gi|384214768|ref|YP_005605932.1| hypothetical protein BJ6T_10520 [Bradyrhizobium japonicum USDA 6]
 gi|354953665|dbj|BAL06344.1| hypothetical protein BJ6T_10520 [Bradyrhizobium japonicum USDA 6]
          Length = 187

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 10/157 (6%)

Query: 422 ENRKTTPIV---------PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVL 472
           E  + TP+V         P+F    +W N+ PL+   DL+GKVV++DFWTY C+NC++ L
Sbjct: 28  EAARATPVVTAAASRQTAPDFTGINNWFNSKPLRIA-DLRGKVVLVDFWTYGCVNCVNTL 86

Query: 473 PDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELG 532
           P +  L  KYKD    VVGVH+ +F  E+    ++ A+ R+GI++PV  D D   W    
Sbjct: 87  PHVTDLYAKYKDKGLVVVGVHTPEFPFERSAANVQAALKRHGITYPVAQDNDSKTWNAYQ 146

Query: 533 VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
              WP   ++  +GK++ Q  GEG   ++D  V   L
Sbjct: 147 NQYWPAQYIIDQSGKIVFQHEGEGRYDEIDRTVAKLL 183


>gi|398802734|ref|ZP_10561937.1| Peroxiredoxin [Polaromonas sp. CF318]
 gi|398098972|gb|EJL89245.1| Peroxiredoxin [Polaromonas sp. CF318]
          Length = 177

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+APL+   DL+GKVV++DFWTY CINC++ LP ++   +KYKD     V
Sbjct: 38  PEFAGIDTWLNSAPLRMA-DLRGKVVLVDFWTYTCINCLNHLPAVKSWHEKYKDKGLVTV 96

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK  + ++ A+ R GI H V  D     WR    N WP   +V   G ++ 
Sbjct: 97  GVHTPEFAYEKSTKNVKAAIERLGIQHAVAQDNSYATWRAFSNNYWPAVYLVDKTGHVVY 156

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG   + +  ++  L
Sbjct: 157 SHFGEGRYAETEKTIQTLL 175


>gi|27376137|ref|NP_767666.1| hypothetical protein bll1026 [Bradyrhizobium japonicum USDA 110]
 gi|27349276|dbj|BAC46291.1| bll1026 [Bradyrhizobium japonicum USDA 110]
          Length = 187

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F     W N+ PL    DL+GKVV++DFWTY C+NC++ LP +  L  KYKD    VV
Sbjct: 46  PDFTGINTWFNSKPLSIA-DLRGKVVLVDFWTYGCVNCVNTLPHVTDLYAKYKDKGLVVV 104

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    ++ A+ R+GI++PV  D D   W       WP   ++   GK++ 
Sbjct: 105 GVHTPEFPFERSASNVQAALKRHGITYPVAQDNDSKTWNAYSNQYWPAQYIIDQTGKIVF 164

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q AGEG   ++D  V   L
Sbjct: 165 QHAGEGRYDEIDRTVARLL 183


>gi|398809816|ref|ZP_10568657.1| cytochrome c biogenesis protein [Variovorax sp. CF313]
 gi|398084908|gb|EJL75579.1| cytochrome c biogenesis protein [Variovorax sp. CF313]
          Length = 577

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 1/145 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P      +WLN+APL     L+GKVV++DFWTY CINC+  LP +    +KYKD    V
Sbjct: 261 LPSLAGATEWLNSAPLT-AESLRGKVVLVDFWTYSCINCLRTLPYVRAWAEKYKDAGLVV 319

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  EK    +R A    GI  PV  D D  +WR  G   WP F +V   G++ 
Sbjct: 320 VGVHAPEFAFEKLPANVRRATKDLGIGFPVAIDSDYAIWRAFGNQYWPAFYIVDAQGRIR 379

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGK 574
               GEG     + +++  L   G+
Sbjct: 380 HHQFGEGQYAKAEQVIQQLLAEAGR 404


>gi|335034054|ref|ZP_08527416.1| redoxin domain-containing protein [Agrobacterium sp. ATCC 31749]
 gi|333794589|gb|EGL65924.1| redoxin domain-containing protein [Agrobacterium sp. ATCC 31749]
          Length = 592

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 1/154 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL  R  L+GKVV++DFWTY CINC+  +P +    +KY+D    V+
Sbjct: 279 PSLNGAVEWLNSPPLT-REQLRGKVVLIDFWTYSCINCIRTIPYVRAWAEKYRDQGLVVI 337

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 338 GVHAPEFAFEKKIDNVRQAVADFKIDYPVAIDNDYKIWRAFDNSYWPAHYLIDARGQIRY 397

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLP 584
              GEG+ ++ ++ ++  L   G      +T  P
Sbjct: 398 HHFGEGNYRETEEAIQDLLREAGSSASASDTVTP 431


>gi|317048086|ref|YP_004115734.1| cytochrome c biogenesis protein transmembrane region [Pantoea sp.
           At-9b]
 gi|316949703|gb|ADU69178.1| cytochrome c biogenesis protein transmembrane region [Pantoea sp.
           At-9b]
          Length = 395

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 10/178 (5%)

Query: 401 TEGGSSQSERIQQFVNYISDVENRKTTPI---------VPEFPAKLDWLNTAPLQFRRDL 451
            + G   ++ ++Q +++       K TP+          P       W N+APL  R DL
Sbjct: 214 VQAGPQLAQNLEQRLSHFLPTSAPKITPVPVVEQTQSAFPGLAGGTGWFNSAPLN-RADL 272

Query: 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVL 511
           +GKVV++DFWTY CINC H LP +    KKY+    TV+GVH+ ++  E+D  A+  A+ 
Sbjct: 273 QGKVVLIDFWTYDCINCQHTLPHVRDWAKKYQQDGLTVIGVHTPEYPWERDPAAVARAIK 332

Query: 512 RYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           ++G+S+PVV D +  +W   G   WP   +   +G+L     GEG     + +++  L
Sbjct: 333 QWGLSYPVVADNNYAIWNRFGNMYWPAHYIFDVHGQLRYTAFGEGDYAGQEKVIQQLL 390


>gi|302551068|ref|ZP_07303410.1| NHL repeat-containing protein [Streptomyces viridochromogenes DSM
            40736]
 gi|302468686|gb|EFL31779.1| NHL repeat-containing protein [Streptomyces viridochromogenes DSM
            40736]
          Length = 498

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 190/434 (43%), Gaps = 47/434 (10%)

Query: 600  LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNR- 658
            L +P K+A+D   N LF SD +++R+   D     I  +  +G  G  +G    A ++R 
Sbjct: 39   LNYPRKVAVDSSGN-LFFSDYSNHRVRRVDAATQQITTVAGNGTAGF-NGDNQPAVYSRL 96

Query: 659  --PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLL 715
              P+G+A +A  NL ++AD  NH +R +D     + T+AG G  G  + G  +   +  L
Sbjct: 97   HYPRGVAVDAGGNL-FIADCNNHRVRRVDAATRQITTVAGTGIAG--FNGDNQPAVNAQL 153

Query: 716  NSPWDVCYKPI---------NEKVYIAMAGQHQIWEHSTVDGV-TRAFSGDGYERNLNGS 765
            NSP  V              N++V    A   QI   +TV G  T  F+GD         
Sbjct: 154  NSPIGVAVDAGGNLFITDFNNQRVRRVDAATRQI---TTVAGTGTAGFNGDN-------Q 203

Query: 766  SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFG 825
            S++N     P G++       +++ D  +  +R ++  T     +AG        +  F 
Sbjct: 204  SAVNAQLYGPVGVAADAG-GNLFIGDYANHRVRRVDAATRQITTVAG------TGIAGFN 256

Query: 826  DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--D 883
              +       L  P  V     G +++AD+ NH+++++D A+ +++T+AGIG AGF    
Sbjct: 257  GDNQPAVNAQLNAPHTVAVDSGGNVFIADTSNHRVRRVDAATRQITTVAGIGTAGFNGDG 316

Query: 884  GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSR 943
            G A+  QL+ P G+     G LFIAD +N  +R +       ++ +     V P  P   
Sbjct: 317  GPAIGVQLNSPVGVAVDSGGGLFIADASNYRVRKVS------DVASTARFSVAPGGPPDV 370

Query: 944  SPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVII 1003
              +R      P  Q    D G     N+  ++ LP           ++++ V P  A   
Sbjct: 371  RLERAGNTGYPGVQVRAEDDGTIAPQNV--RVDLPAGVGLQFVGEPRYTLTVLPA-AGTS 427

Query: 1004 DPLDGNLSPEGSAV 1017
                G +SP+G ++
Sbjct: 428  RSYYGTVSPDGQSL 441


>gi|386876305|ref|ZP_10118427.1| antioxidant, AhpC/TSA family [Candidatus Nitrosopumilus salaria
           BD31]
 gi|386805881|gb|EIJ65378.1| antioxidant, AhpC/TSA family [Candidatus Nitrosopumilus salaria
           BD31]
          Length = 369

 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 80/141 (56%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P+      +LNT P +  +++KGKVV+ DFWTY CINC+  LP +    +KY +    
Sbjct: 55  MAPDLTGIAYYLNTTPEELSKEIKGKVVLYDFWTYSCINCIRTLPYITAWNEKYSEQGLL 114

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           ++GVHS +F+ EKD E ++ A+ ++GI +PVV D DM  W+      WP   +    G L
Sbjct: 115 IIGVHSPEFEFEKDPENVKMAIDKHGIEYPVVLDNDMKTWKAFENRYWPRKYIADHEGYL 174

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG  K+ + +++  L
Sbjct: 175 RYDHIGEGGYKETEKIIQKLL 195


>gi|171317334|ref|ZP_02906529.1| Redoxin domain protein [Burkholderia ambifaria MEX-5]
 gi|171097475|gb|EDT42314.1| Redoxin domain protein [Burkholderia ambifaria MEX-5]
          Length = 197

 Score =  116 bits (291), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 2/143 (1%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           TP  P+F     W N+APL+  + L+GKVV++DFWTY CINC+H +P +    +KY+D  
Sbjct: 39  TP-APDFTGIERWQNSAPLKLAQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQG 96

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             VVGVH+ ++  E+D + + +A+ R+ I +PV  D   + WR  G   WP   ++  NG
Sbjct: 97  LVVVGVHTPEYPFERDSKNVADALKRFDIQYPVAQDNRYDTWRAYGNQYWPALYLIDANG 156

Query: 547 KLLAQLAGEGHRKDLDDLVEAAL 569
           K++    GEG     +  +  AL
Sbjct: 157 KIIYTRYGEGGYDKTEAAIREAL 179


>gi|223934698|ref|ZP_03626618.1| NHL repeat containing protein [bacterium Ellin514]
 gi|223896653|gb|EEF63094.1| NHL repeat containing protein [bacterium Ellin514]
          Length = 847

 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 174/374 (46%), Gaps = 32/374 (8%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D   N ++++D+ +  I +    G+     G++G  G  D S  +A F++P G+
Sbjct: 224 PEAVAVDQAGN-VYVADTGNAAIRMIMPGGSVTTLAGAAGFVGSADASGTNALFHQPAGI 282

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGSDYQGGEKGTSQLLNSPWDV 721
             N+  NL YVAD  N+ +R+I      V TLAG +GT GS    G   +++ L  P  V
Sbjct: 283 GINSAGNL-YVADYFNNTIRQISPAG-VVTTLAGLSGTAGS--ADGTNSSARFL-GPQGV 337

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
                   V+IA      I    T  GV    +G   E ++NG +S +  F  P  +++ 
Sbjct: 338 AVDSTG-TVFIADTANSTI-RVMTAAGVVTTLAGSPSEGSINGVTS-SARFYSPQNVAVD 394

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                IYVAD+++S IR +    G   +LAG   +F       G  DG G+  L   P G
Sbjct: 395 GQ-NNIYVADTQNSVIRKIT-PFGVVSVLAGTTGVF-------GSADGSGANALFSGPQG 445

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLSEPAGIIEA 900
           +     G IYVAD+ N  I+K+ P S   STLAG  G  G  DGA + AQ  +P G+   
Sbjct: 446 IAVDGGGNIYVADTGNSTIRKITP-SGSTSTLAGSAGNPGNADGAGITAQFYQPQGVAVD 504

Query: 901 QNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIV 960
              N+++ADT N+ +R +      P   +  L G+              R + P    I 
Sbjct: 505 SANNVYVADTGNHTVRMV-----TPGGISSTLAGLAGTFGTFDGTNAGARFNGPTG--IA 557

Query: 961 VDGGLSNEGNIYLK 974
           VDG     GN+Y+ 
Sbjct: 558 VDG----AGNLYVT 567



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 156/325 (48%), Gaps = 36/325 (11%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D   N ++++D+ +N I V    G      G++G +G  DG    A+FN+P G+
Sbjct: 61  PQGVAVDGAGN-VYVADTGNNIIRVVTASGLCRTLAGTAGVQGSADGMGAQASFNQPSGI 119

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGSDYQGGEKGTSQLLNSPWDV 721
           A ++  N+ YV+D  +  +R++   +  V TLAG  G  GS       GT+ L   P  +
Sbjct: 120 ALDSDGNI-YVSDYGSSTIRKVT-QSGQVTTLAGMTGVTGSVN---NTGTNALFFHPMGL 174

Query: 722 CYKPINEKVYIAMAGQHQIWE------HSTVDGVTRA-FSGDGYERNLNGSSSLNTSFAQ 774
                   +Y+A  G H I +       ST+ GVT    S DG          L   F +
Sbjct: 175 AVDNA-TNLYVADYGNHLIRKITPSNVVSTLAGVTGVPGSADG----------LGGQFNE 223

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P  +++      +YVAD+ +++IR +    GGS     G   F       G  D  G+  
Sbjct: 224 PEAVAVD-QAGNVYVADTGNAAIRMI--MPGGSVTTLAGAAGF------VGSADASGTNA 274

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSE 893
           L   P G+     G +YVAD +N+ I+++ PA   V+TLAG+ G AG  DG   +A+   
Sbjct: 275 LFHQPAGIGINSAGNLYVADYFNNTIRQISPAG-VVTTLAGLSGTAGSADGTNSSARFLG 333

Query: 894 PAGIIEAQNGNLFIADTNNNIIRYL 918
           P G+     G +FIADT N+ IR +
Sbjct: 334 PQGVAVDSTGTVFIADTANSTIRVM 358



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 156/326 (47%), Gaps = 23/326 (7%)

Query: 597 TSPLKF--PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDA 654
           TS  +F  P  +A+D  NN ++++D+ ++ I      G   V  G++G  G  DGS  +A
Sbjct: 380 TSSARFYSPQNVAVDGQNN-IYVADTQNSVIRKITPFGVVSVLAGTTGVFGSADGSGANA 438

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
            F+ PQG+A +   N+ YVADT N  +R+I     T  TLAG+     +  G   G +  
Sbjct: 439 LFSGPQGIAVDGGGNI-YVADTGNSTIRKITPSGST-STLAGSAGNPGNADG--AGITAQ 494

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFA 773
              P  V     N  VY+A  G H +    T  G++   +G  G     +G+++    F 
Sbjct: 495 FYQPQGVAVDSANN-VYVADTGNHTV-RMVTPGGISSTLAGLAGTFGTFDGTNA-GARFN 551

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            P+GI++      +YV D  + +IR +    G    LAG   ++       G  DG G+ 
Sbjct: 552 GPTGIAVD-GAGNLYVTDYNNDTIRKVT-SAGAVTTLAGWTGMW-------GSIDGAGNS 602

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAGI-GKAGFKDGAALAAQ 890
            L   P G+     G +YV DS N  ++KL  +     VST+AG+ G  G  DG+   A+
Sbjct: 603 ALFFGPSGISVDALGNLYVIDSGNSTLRKLTLSGGTWTVSTVAGMPGVNGGIDGSGAGAE 662

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIR 916
              PAG+  +  G +++AD  NN IR
Sbjct: 663 FYYPAGVTVSAAGYVYVADAGNNTIR 688



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 152/326 (46%), Gaps = 41/326 (12%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  + I+   N L+++D  +N I      G      G SG  G  DG+   A F  PQG+
Sbjct: 279 PAGIGINSAGN-LYVADYFNNTIRQISPAGVVTTLAGLSGTAGSADGTNSSARFLGPQGV 337

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A ++   + ++ADT N  +R +      V TLAG+ ++GS    G   +++         
Sbjct: 338 AVDSTGTV-FIADTANSTIRVMTAAG-VVTTLAGSPSEGS--INGVTSSARF-------- 385

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL---------NTSFA 773
           Y P N    +A+ GQ+ I+   T + V R  +  G    L G++ +         N  F+
Sbjct: 386 YSPQN----VAVDGQNNIYVADTQNSVIRKITPFGVVSVLAGTTGVFGSADGSGANALFS 441

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG--GDPIFPDNLFKFGDRDGMG 831
            P GI++      IYVAD+ +S+IR +   +G +  LAG  G+P         G+ DG G
Sbjct: 442 GPQGIAVDGG-GNIYVADTGNSTIRKIT-PSGSTSTLAGSAGNP---------GNADGAG 490

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQ 890
                  P GV       +YVAD+ NH ++ + P     STLAG+ G  G  DG    A+
Sbjct: 491 ITAQFYQPQGVAVDSANNVYVADTGNHTVRMVTPGGIS-STLAGLAGTFGTFDGTNAGAR 549

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIR 916
            + P GI     GNL++ D NN+ IR
Sbjct: 550 FNGPTGIAVDGAGNLYVTDYNNDTIR 575



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 149/331 (45%), Gaps = 21/331 (6%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D     +FI+D+ ++ I V    G  +  +  S  EG  +G    A F  PQ +
Sbjct: 334 PQGVAVD-STGTVFIADTANSTIRVMTAAG-VVTTLAGSPSEGSINGVTSSARFYSPQNV 391

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A + + N+ YVADT+N  +R+I      V  LAG  T G        G + L + P  + 
Sbjct: 392 AVDGQNNI-YVADTQNSVIRKITPFG-VVSVLAG--TTGVFGSADGSGANALFSGPQGIA 447

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLS 781
                  +Y+A  G   I    T  G T   +G  G   N +G+  +   F QP G+++ 
Sbjct: 448 VDG-GGNIYVADTGNSTI-RKITPSGSTSTLAGSAGNPGNADGAG-ITAQFYQPQGVAVD 504

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                +YVAD+ + ++R +    G S  LAG           FG  DG  +      P G
Sbjct: 505 -SANNVYVADTGNHTVRMVT-PGGISSTLAG-------LAGTFGTFDGTNAGARFNGPTG 555

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLSEPAGIIEA 900
           +     G +YV D  N  I+K+  A   V+TLAG  G  G  DGA  +A    P+GI   
Sbjct: 556 IAVDGAGNLYVTDYNNDTIRKVTSAG-AVTTLAGWTGMWGSIDGAGNSALFFGPSGISVD 614

Query: 901 QNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931
             GNL++ D+ N+ +R L L+     + T+ 
Sbjct: 615 ALGNLYVIDSGNSTLRKLTLSGGTWTVSTVA 645



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 2/108 (1%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKD 883
           G  DG+G    L  P GV     G +YVAD+ N+ I+ +  AS    TLAG  G  G  D
Sbjct: 47  GSADGVGGSAQLFGPQGVAVDGAGNVYVADTGNNIIRVVT-ASGLCRTLAGTAGVQGSAD 105

Query: 884 GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931
           G    A  ++P+GI    +GN++++D  ++ IR +  + +   L  + 
Sbjct: 106 GMGAQASFNQPSGIALDSDGNIYVSDYGSSTIRKVTQSGQVTTLAGMT 153



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 870 VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           + T+AG    G  DG   +AQL  P G+     GN+++ADT NNIIR +
Sbjct: 37  IGTVAGYAGKGSADGVGGSAQLFGPQGVAVDGAGNVYVADTGNNIIRVV 85


>gi|383784367|ref|YP_005468936.1| hypothetical protein LFE_1113 [Leptospirillum ferrooxidans C2-3]
 gi|383083279|dbj|BAM06806.1| hypothetical protein LFE_1113 [Leptospirillum ferrooxidans C2-3]
          Length = 382

 Score =  116 bits (290), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 17/290 (5%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN--DTVRTLAG 696
           GS  E G  DG+   A F  PQG+   A    +YVADT N  +R+I   +   TV T+AG
Sbjct: 48  GSFHERGDNDGNGASARFEFPQGIVA-APDGSIYVADTGNDMIRKITMSSGTGTVETIAG 106

Query: 697 NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD 756
                    G   G +   N+P  +   P  + +Y+A +  ++I +           +G 
Sbjct: 107 VNHHARFRDG--AGAAARFNNPEGLAISPDGKTLYVADSRNNRIRKIDLATKTVSTLAGH 164

Query: 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI 816
            +    +G    +  FAQP G+++SPD   +Y+ DS ++ IR ++L T     LAG   +
Sbjct: 165 AFASGNDGIGD-HAGFAQPRGLAISPDGKTLYIGDSGNNMIRKMDLTTLQVTTLAGQGAL 223

Query: 817 FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASNRVSTLAG 875
            P      G  DG+G++     P G+  + +GQI Y+AD+ NH I+KL  A+N VSTLAG
Sbjct: 224 VP------GHADGVGTQATFLEPRGLAISPDGQILYIADTRNHLIRKLVLATNSVSTLAG 277

Query: 876 I-GKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKE 923
             G  G  +G    A   +P  ++ A +GN L++ D  N  +R +DLN +
Sbjct: 278 HPGFPGTLNGPGPDAYFYDP--MMLAIDGNKLYVCDAANADLRLIDLNSD 325



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 163/339 (48%), Gaps = 27/339 (7%)

Query: 590 DNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHN---RIVVTDLDGNFIVQIGSSGEEGL 646
           DND    ++  +FP  + +   +  ++++D+ ++   +I ++   G      G +     
Sbjct: 55  DNDGNGASARFEFPQGI-VAAPDGSIYVADTGNDMIRKITMSSGTGTVETIAGVNHHARF 113

Query: 647 RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG-TKGSDYQ 705
           RDG+   A FN P+GLA +     LYVAD+ N+ +R+ID    TV TLAG+    G+D  
Sbjct: 114 RDGAGAAARFNNPEGLAISPDGKTLYVADSRNNRIRKIDLATKTVSTLAGHAFASGNDGI 173

Query: 706 GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI--WEHSTVDGVTRAFSGDGYERNLN 763
           G   G +Q    P  +   P  + +YI  +G + I   + +T+   T A  G     + +
Sbjct: 174 GDHAGFAQ----PRGLAISPDGKTLYIGDSGNNMIRKMDLTTLQVTTLAGQGALVPGHAD 229

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
           G  +  T F +P G+++SPD   +Y+AD+ +  IR L L T     LA G P FP  L  
Sbjct: 230 GVGTQAT-FLEPRGLAISPDGQILYIADTRNHLIRKLVLATNSVSTLA-GHPGFPGTL-- 285

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA------GIG 877
               +G G +     P+ +    N ++YV D+ N  ++ +D  S+ VST+A      G+ 
Sbjct: 286 ----NGPGPDAYFYDPMMLAIDGN-KLYVCDAANADLRLIDLNSDTVSTVAGATINGGVP 340

Query: 878 KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
             G +DG         P G +   +G L++ DT  + IR
Sbjct: 341 IKGREDGDGTLGHFEFP-GAVTIYHGVLYVTDTPADTIR 378



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 16/188 (8%)

Query: 751 RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK--TGGSR 808
           +  +G  +ER  N  +  +  F  P GI  +PD   IYVAD+ +  IR + +   TG   
Sbjct: 44  KTIAGSFHERGDNDGNGASARFEFPQGIVAAPD-GSIYVADTGNDMIRKITMSSGTGTVE 102

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPAS 867
            +AG      ++  +F  RDG G+     +P G+  + +G+ +YVADS N++I+K+D A+
Sbjct: 103 TIAG-----VNHHARF--RDGAGAAARFNNPEGLAISPDGKTLYVADSRNNRIRKIDLAT 155

Query: 868 NRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG-NLFIADTNNNIIRYLDLNKEEPE 926
             VSTLAG   A   DG    A  ++P G+  + +G  L+I D+ NN+IR +DL      
Sbjct: 156 KTVSTLAGHAFASGNDGIGDHAGFAQPRGLAISPDGKTLYIGDSGNNMIRKMDLT----T 211

Query: 927 LQTLELKG 934
           LQ   L G
Sbjct: 212 LQVTTLAG 219


>gi|298290832|ref|YP_003692771.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Starkeya novella DSM 506]
 gi|296927343|gb|ADH88152.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Starkeya novella DSM 506]
          Length = 639

 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 1/153 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           ++P       WLN+APL     LKGKVV++DFWTY CINC+  +P +    +KYKD    
Sbjct: 324 MLPSLKGATGWLNSAPLT-AESLKGKVVLIDFWTYSCINCLRTIPYVRAWAEKYKDQGLV 382

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVHS +F  E+D++ ++ AV    I++PV  D D  +WR      WP    +   G++
Sbjct: 383 VIGVHSPEFAFERDVDNVKKAVADLKITYPVAIDNDYAIWRAFKNQYWPAHYFIDAQGRI 442

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNT 581
                GEG  ++ + +++  L   G++ +   T
Sbjct: 443 RYHHFGEGGYEESERVIQQLLAEAGRRDVTSGT 475


>gi|290995070|ref|XP_002680154.1| predicted protein [Naegleria gruberi]
 gi|284093774|gb|EFC47410.1| predicted protein [Naegleria gruberi]
          Length = 636

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 184/352 (52%), Gaps = 44/352 (12%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRDG 649
           ++ L +P  +AI   ++  +I+D+N++RI       +++ + GN     G++G  G  DG
Sbjct: 153 SAKLYYPSGIAIS-SSDETYIADTNNHRIRKITTSGIISTIAGN-----GTAGYSG--DG 204

Query: 650 S-FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-G 707
           S    A    P G+A ++   + Y+ D  N+ +R+I   +  + T+AGNGT G  Y G G
Sbjct: 205 SSAKSAQLYYPSGVAISSSDEI-YIVDRSNNRIRKIT-TSGIISTIAGNGTAG--YSGDG 260

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSS 766
              TS  LNSP  +     +E +YIA    ++I + +T  G+    +G G    + +GSS
Sbjct: 261 SSATSAQLNSPSGIAISSSDE-IYIADMFNNRIRKITT-SGIISTIAGTGTSGYSGDGSS 318

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
           + +     P G+++S    EIY+AD  ++ IR +   +G    +AGG             
Sbjct: 319 ATSIQLYFPYGVAVSLS-DEIYIADMFNNRIRKIT-TSGIISTIAGGIG----------- 365

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA 885
            DG+ +     + +    + +G+IY+AD+ NH+I+K+   S  +ST+AG G +G+  DG+
Sbjct: 366 -DGLSATTAYINAITFEFSSSGEIYIADTNNHRIRKI-TTSGIISTIAGTGTSGYSGDGS 423

Query: 886 -ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQ 936
            A +AQL+ P GI  + +G ++IADTNNN IR +        + T+   G Q
Sbjct: 424 SATSAQLNSPYGIAISSSGEIYIADTNNNRIRKI---TTSGIISTIAGTGTQ 472



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 176/383 (45%), Gaps = 83/383 (21%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRDG 649
           ++ L +P  +AI   ++ ++I D ++NRI       +++ + GN     G++G  G  DG
Sbjct: 209 SAQLYYPSGVAIS-SSDEIYIVDRSNNRIRKITTSGIISTIAGN-----GTAGYSG--DG 260

Query: 650 S-FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-G 707
           S    A  N P G+A ++   + Y+AD  N+ +R+I   +  + T+AG GT G  Y G G
Sbjct: 261 SSATSAQLNSPSGIAISSSDEI-YIADMFNNRIRKIT-TSGIISTIAGTGTSG--YSGDG 316

Query: 708 EKGTSQLLNSPWDVCYKPINE--------------------------------------- 728
              TS  L  P+ V     +E                                       
Sbjct: 317 SSATSIQLYFPYGVAVSLSDEIYIADMFNNRIRKITTSGIISTIAGGIGDGLSATTAYIN 376

Query: 729 ----------KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTSFAQPSG 777
                     ++YIA    H+I + +T  G+    +G G    + +GSS+ +     P G
Sbjct: 377 AITFEFSSSGEIYIADTNNHRIRKITT-SGIISTIAGTGTSGYSGDGSSATSAQLNSPYG 435

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           I++S    EIY+AD+ ++ IR +      S +   G   +       GD     +   L 
Sbjct: 436 IAISSS-GEIYIADTNNNRIRKITTSGIISTIAGTGTQGYS------GDGSSA-TSAQLY 487

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPA 895
           +P GV  +  G+IYVAD  N++I+K+   S  +ST+AG G +G+  DG+ A++AQL  P 
Sbjct: 488 NPYGVAISSRGEIYVADYNNNRIRKI-TTSGIISTIAGTGTSGYSGDGSSAISAQLYNPY 546

Query: 896 GIIEAQNGNLFIADTNNNIIRYL 918
           G+  + +  ++I DTNNN IR L
Sbjct: 547 GVAISSSDEIYITDTNNNRIRKL 569



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 133/261 (50%), Gaps = 19/261 (7%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNS 717
           P G+A ++     Y+ADT NH +R+I   +  + T+AGNGT G  Y G G    S  L  
Sbjct: 49  PSGIAISSSDET-YIADTNNHRIRKIT-TSGIISTIAGNGTAG--YSGDGSSAKSAQLYY 104

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           P  V     +E +YI     ++I + +T  G+    +G+G     +G  + +     PSG
Sbjct: 105 PSGVAISSSDE-IYIVDRSNNRIRKITT-SGIISTIAGNG-TAGYSGDVATSAKLYYPSG 161

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           I++S    E Y+AD+ +  IR +      S +   G   +       GD     S   L 
Sbjct: 162 IAISSS-DETYIADTNNHRIRKITTSGIISTIAGNGTAGYS------GDGSSAKS-AQLY 213

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AALAAQLSEPA 895
           +P GV  + + +IY+ D  N++I+K+   S  +ST+AG G AG+  DG +A +AQL+ P+
Sbjct: 214 YPSGVAISSSDEIYIVDRSNNRIRKI-TTSGIISTIAGNGTAGYSGDGSSATSAQLNSPS 272

Query: 896 GIIEAQNGNLFIADTNNNIIR 916
           GI  + +  ++IAD  NN IR
Sbjct: 273 GIAISSSDEIYIADMFNNRIR 293



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 28/271 (10%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L FP  +A+  L++ ++I+D  +NRI      G     I S+   G+ DG      +   
Sbjct: 324 LYFPYGVAVS-LSDEIYIADMFNNRIRKITTSG-----IISTIAGGIGDGLSATTAYINA 377

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSP 718
               +++   + Y+ADT NH +R+I   +  + T+AG GT G  Y G G   TS  LNSP
Sbjct: 378 ITFEFSSSGEI-YIADTNNHRIRKIT-TSGIISTIAGTGTSG--YSGDGSSATSAQLNSP 433

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTSFAQPSG 777
           + +      E +YIA    ++I + +T  G+    +G G +  + +GSS+ +     P G
Sbjct: 434 YGIAISSSGE-IYIADTNNNRIRKITT-SGIISTIAGTGTQGYSGDGSSATSAQLYNPYG 491

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL-- 835
           +++S    EIYVAD  ++ IR +      S +   G   +           G GS  +  
Sbjct: 492 VAISSR-GEIYVADYNNNRIRKITTSGIISTIAGTGTSGYS----------GDGSSAISA 540

Query: 836 -LQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
            L +P GV  + + +IY+ D+ N++I+KL P
Sbjct: 541 QLYNPYGVAISSSDEIYITDTNNNRIRKLSP 571


>gi|172064154|ref|YP_001811805.1| redoxin domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171996671|gb|ACB67589.1| Redoxin domain protein [Burkholderia ambifaria MC40-6]
          Length = 197

 Score =  115 bits (289), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 2/144 (1%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           TP  P+F     W N+APL+  + L+GKVV++DFWTY CINC+H +P +    +KY+D  
Sbjct: 39  TP-APDFTGIERWQNSAPLKLAQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQG 96

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             VVGVH+ ++  E+D + + +A+ R+ I +PV  D   + WR  G   WP   ++  NG
Sbjct: 97  LVVVGVHTPEYPFERDPKNVADALKRFDIQYPVAQDNRYDTWRAYGNQYWPALYLIDANG 156

Query: 547 KLLAQLAGEGHRKDLDDLVEAALL 570
           K++    GEG     +  +  AL+
Sbjct: 157 KIVYTRYGEGGYDKTEAAIREALV 180


>gi|338739938|ref|YP_004676900.1| cytochrome c biogenesis protein, transmembrane region
           [Hyphomicrobium sp. MC1]
 gi|337760501|emb|CCB66334.1| Cytochrome c biogenesis protein, transmembrane region
           [Hyphomicrobium sp. MC1]
          Length = 580

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+ PL  R  LKGKVV++DFWTY CINC+  LP +E   KKYKD    V
Sbjct: 267 MPSIDGAVEWLNSPPLT-REALKGKVVLVDFWTYSCINCLRALPYVEAWAKKYKDEGLVV 325

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  EK +  ++ AV   GI++PV  D +  +WR      WP    +  NG + 
Sbjct: 326 VGVHAPEFAFEKKIANVKQAVSDLGITYPVAIDNNYAIWRAFNNEYWPAHYFIDANGNIR 385

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG     + +++  L   G K +
Sbjct: 386 HHHFGEGDYDGSERVIQKLLAEAGHKNV 413


>gi|295700355|ref|YP_003608248.1| redoxin [Burkholderia sp. CCGE1002]
 gi|295439568|gb|ADG18737.1| Redoxin domain protein [Burkholderia sp. CCGE1002]
          Length = 179

 Score =  115 bits (289), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 1/146 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           +++ P  PE      WLN+ PL+ ++ L+GKVV++DFWTY CINC + LP ++   +KYK
Sbjct: 31  QESGPPAPELTGIAQWLNSEPLKLQQ-LRGKVVLVDFWTYSCINCANTLPYVKSWNQKYK 89

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D   TV+GVH+ ++  E+D   ++ A+ R GI++PV  D     W       WP F ++ 
Sbjct: 90  DQGLTVIGVHTPEYPFERDTGNVKTAIKRLGITYPVAQDNQYATWNAYNNQYWPAFYLID 149

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAAL 569
             G ++    GEG     +  ++A L
Sbjct: 150 KQGHIVYTHFGEGDYAQTEARIQALL 175


>gi|153868931|ref|ZP_01998653.1| receptor protein kinase [Beggiatoa sp. PS]
 gi|152074497|gb|EDN71345.1| receptor protein kinase [Beggiatoa sp. PS]
          Length = 3115

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 31/331 (9%)

Query: 600  LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIV--QIGSSGEEGLRDGSFDDATFN 657
            L  P  ++ D   N  +I+DS ++RI+  D  GN  V    G+ G  G  DG   +A   
Sbjct: 2127 LNSPKSMSFDASGNA-YIADSLNHRILKRDTQGNLTVVAGTGAKGSTG-DDGPAIEAKLK 2184

Query: 658  RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
             PQG A + + NL Y+ADT NH +R++D  N  + T+AG G  G+    G    ++L N 
Sbjct: 2185 NPQGTAIDHEGNL-YIADTLNHRIRKVD-SNGIITTVAGIGKAGNTGDNGLATAAKLRN- 2241

Query: 718  PWDVCYKPINEKVYIAMAGQHQIWEHS-------TVDGVTRAFSGDG---YERNLNGSSS 767
            P  + +   N  +YIA +G H+I + S       + + +    +G+G   Y+ + NG ++
Sbjct: 2242 PTAIVFDN-NGHLYIADSGNHRIRKVSGQRTRKPSANSIITTVAGNGRSGYQGD-NGPAT 2299

Query: 768  LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
                 + P+G+++      +Y+AD+++  IR ++L TG    +AG       N    GD 
Sbjct: 2300 -GARLSNPTGLAVDSQ-NNLYIADTDNHRIRKVDL-TGTITTVAGNG-----NKGYSGDG 2351

Query: 828  DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
            D   +   +  P G+     G +Y+AD  NH+I+K+D     ++T  G GK G      +
Sbjct: 2352 D-PATAAQINTPTGLEVDSTGNLYIADKNNHRIRKVD-TEGIITTFTGTGKPGTATDGII 2409

Query: 888  A--AQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            A  AQ+S+P  +   Q GNL+IAD  N+ IR
Sbjct: 2410 ASVAQISQPTDVALDQYGNLYIADKGNDTIR 2440



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 115/218 (52%), Gaps = 24/218 (11%)

Query: 715  LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            LNSP  + +   +   YIA +  H+I +  T   +T            +   ++      
Sbjct: 2127 LNSPKSMSFDA-SGNAYIADSLNHRILKRDTQGNLTVVAGTGAKGSTGDDGPAIEAKLKN 2185

Query: 775  PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR--DGMGS 832
            P G ++  +   +Y+AD+ +  IR ++   G    +AG        + K G+   +G+ +
Sbjct: 2186 PQGTAIDHE-GNLYIADTLNHRIRKVD-SNGIITTVAG--------IGKAGNTGDNGLAT 2235

Query: 833  EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLD------PASNRV-STLAGIGKAGFK--D 883
               L++P  +    NG +Y+ADS NH+I+K+       P++N + +T+AG G++G++  +
Sbjct: 2236 AAKLRNPTAIVFDNNGHLYIADSGNHRIRKVSGQRTRKPSANSIITTVAGNGRSGYQGDN 2295

Query: 884  GAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDL 920
            G A  A+LS P G+ +++QN NL+IADT+N+ IR +DL
Sbjct: 2296 GPATGARLSNPTGLAVDSQN-NLYIADTDNHRIRKVDL 2332



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 836  LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSE 893
            L  P  +    +G  Y+ADS NH+I K D   N ++ +AG G  G    DG A+ A+L  
Sbjct: 2127 LNSPKSMSFDASGNAYIADSLNHRILKRDTQGN-LTVVAGTGAKGSTGDDGPAIEAKLKN 2185

Query: 894  PAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            P G      GNL+IADT N+ IR +D N
Sbjct: 2186 PQGTAIDHEGNLYIADTLNHRIRKVDSN 2213


>gi|409437828|ref|ZP_11264932.1| putative cytochrome biogenesis protein [Rhizobium mesoamericanum
           STM3625]
 gi|408750523|emb|CCM76092.1| putative cytochrome biogenesis protein [Rhizobium mesoamericanum
           STM3625]
          Length = 588

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           ++WLN+ PL    DL+GKVV++DFWTY CINC+  +P L    +KY+D    V+GVHS +
Sbjct: 280 VEWLNSKPLT-AEDLRGKVVLVDFWTYSCINCIRTIPYLRAWAEKYRDQGLVVIGVHSPE 338

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F  EK ++ +R A+  + I +PV  D D  +WR  G N WP    +   G++     GEG
Sbjct: 339 FAFEKRIDNVRQAMDEFQIGYPVAIDNDFKIWRSFGNNYWPAHYFIDAKGQIRHTQFGEG 398

Query: 557 -----HRKDLDDLVEAA 568
                 R   D L EAA
Sbjct: 399 DYEQSERVIQDLLAEAA 415


>gi|170698562|ref|ZP_02889631.1| Redoxin domain protein [Burkholderia ambifaria IOP40-10]
 gi|170136496|gb|EDT04755.1| Redoxin domain protein [Burkholderia ambifaria IOP40-10]
          Length = 195

 Score =  115 bits (288), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 2/143 (1%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           TP  P+F     W N+APL+  + L+GKVV++DFWTY CINC+H +P +    +KY+D  
Sbjct: 39  TP-APDFTGIERWQNSAPLKLAQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQG 96

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             VVGVH+ ++  E+D + + +A+ R+ I +PV  D   + WR  G   WP   ++  NG
Sbjct: 97  LVVVGVHTPEYPFERDPKNVADALKRFDIQYPVAQDNRYDTWRAYGNQYWPALYLIDANG 156

Query: 547 KLLAQLAGEGHRKDLDDLVEAAL 569
           K++    GEG     +  +  AL
Sbjct: 157 KIVYTRYGEGGYDKTEAAIREAL 179


>gi|254254583|ref|ZP_04947900.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia dolosa
           AUO158]
 gi|124899228|gb|EAY71071.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia dolosa
           AUO158]
          Length = 190

 Score =  115 bits (288), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F     W N+APL+  + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PDFTGIDRWHNSAPLKLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D   + +A+ R+ I +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAGNVADAIKRFDIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  +  AL
Sbjct: 161 TRYGEGGYDKTEAAIRGAL 179


>gi|410478931|ref|YP_006766568.1| hypothetical protein LFML04_1390 [Leptospirillum ferriphilum ML-04]
 gi|406774183|gb|AFS53608.1| hypothetical protein LFML04_1390 [Leptospirillum ferriphilum ML-04]
          Length = 427

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 25/288 (8%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           GS      RDG   +A FN P+G+A +     LYVAD+ N+ +R+ID    TV T+AG+ 
Sbjct: 151 GSDHRARYRDGVGANARFNNPEGMAISPDGKTLYVADSRNNMIRKIDLATKTVSTIAGHS 210

Query: 699 TKGS-DYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
              S D  G E G      +P  +   P  + +Y+A +G + I +           +G G
Sbjct: 211 FPSSGDGVGKEAG----FETPRGLAISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAG 266

Query: 758 YERNLNGSS---SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGD 814
             + ++GS+    +  +F +P  +++S D   +Y+AD+ ++ IR + L T     LA G 
Sbjct: 267 --KLMSGSADGVGVQATFHEPRSLAISGDGQVLYIADTRNNLIRKMVLATNSVSTLA-GH 323

Query: 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           P FP  L      +G G +    HP+ V    N ++YVAD  N  I+ +D ++  VST+A
Sbjct: 324 PGFPGTL------NGPGPDAYFYHPVSVTIDGN-KLYVADGANADIRMVDLSTGVVSTVA 376

Query: 875 ------GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
                 G+  AG +DG+ +      P G +   +G LF+ADT  + IR
Sbjct: 377 GATLNGGVPIAGREDGSGVEGHFQFP-GAVTVFHGVLFVADTPADTIR 423



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 133/286 (46%), Gaps = 57/286 (19%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           GS  E G  DG   +A F  PQG+   A    +Y+ADT           ND +R ++ NG
Sbjct: 80  GSFHERGAIDGPGREARFEFPQGI-LAAPDGTIYIADTG----------NDMIRKISSNG 128

Query: 699 TKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758
             G+                      P   +++           H +VD      +G  +
Sbjct: 129 LSGA---------------------TPTPAELH-----------HLSVD--VEDIAGSDH 154

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
                     N  F  P G+++SPD   +YVADS ++ IR ++L T     +AG    FP
Sbjct: 155 RARYRDGVGANARFNNPEGMAISPDGKTLYVADSRNNMIRKIDLATKTVSTIAGHS--FP 212

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIG 877
            +       DG+G E   + P G+  + +G+ +YVADS N+ I+K+D A+N V+TLAG G
Sbjct: 213 SS------GDGVGKEAGFETPRGLAISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAG 266

Query: 878 K--AGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
           K  +G  DG  + A   EP  +  + +G  L+IADT NN+IR + L
Sbjct: 267 KLMSGSADGVGVQATFHEPRSLAISGDGQVLYIADTRNNLIRKMVL 312



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 119/267 (44%), Gaps = 18/267 (6%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +AI      L+++DS +N I   DL    +  I         DG   +A F  P+GL
Sbjct: 171 PEGMAISPDGKTLYVADSRNNMIRKIDLATKTVSTIAGHSFPSSGDGVGKEAGFETPRGL 230

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A +     LYVAD+ N+A+R+ID   +TV TLAG G   S    G  G     + P  + 
Sbjct: 231 AISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAGKLMSGSADG-VGVQATFHEPRSLA 289

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLS 781
                + +YIA    + I +           +G  G+   LNG    +  F  P  +S++
Sbjct: 290 ISGDGQVLYIADTRNNLIRKMVLATNSVSTLAGHPGFPGTLNGPGP-DAYFYHP--VSVT 346

Query: 782 PDFMEIYVADSESSSIRALNLKTG-----GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
            D  ++YVAD  ++ IR ++L TG         L GG PI        G  DG G E   
Sbjct: 347 IDGNKLYVADGANADIRMVDLSTGVVSTVAGATLNGGVPI-------AGREDGSGVEGHF 399

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKL 863
           Q P G     +G ++VAD+    I+++
Sbjct: 400 QFP-GAVTVFHGVLFVADTPADTIREV 425


>gi|373953102|ref|ZP_09613062.1| Ig family protein [Mucilaginibacter paludis DSM 18603]
 gi|373889702|gb|EHQ25599.1| Ig family protein [Mucilaginibacter paludis DSM 18603]
          Length = 3731

 Score =  115 bits (288), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 99/315 (31%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D   N ++++D+ +N I      G  +     SG  G  +G+   A+FN P G+
Sbjct: 85  PFGVAVDASGN-VYVADAGNNLIRKISPVG-VVSTFAGSGVAGSANGTGTAASFNNPFGI 142

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A + + NL YV+D  ++ +R+I      V TLAG+G+ GS       GT+   N+P+ + 
Sbjct: 143 ATDVQGNL-YVSDVNSNLIRKIT-PGGVVTTLAGSGSAGS---VNGTGTAASFNTPYSLT 197

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLS 781
              +   VY+A  G +Q+    T  GV    +G  G    +NG+ +    F  P  ++  
Sbjct: 198 -TDMQGNVYVADYG-NQLIRKITPAGVVTTLAGTVGSSGFVNGTGTA-AKFNYPRSVATD 254

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                +YVAD  + +IR +      +     G P         G  +G G+     +P G
Sbjct: 255 AA-GNVYVADQVNQAIRKITPAGVVTTFAGSGVP---------GALNGTGTAATFYNPTG 304

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901
           V     G +YVADS NH I+K+ PA   V+TLAG G  G  +GA   A    P  ++   
Sbjct: 305 VTMDAQGNVYVADSQNHSIRKITPAG-VVTTLAGTGSMGSANGAGTNASFYYPNAVVADA 363

Query: 902 NGNLFIADTNNNIIR 916
            GNL+IADTNN++IR
Sbjct: 364 LGNLYIADTNNHLIR 378



 Score =  112 bits (279), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 20/314 (6%)

Query: 603  PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
            P  +  D   N L+I+D N NR++        +     SG  G  +G+   A+FN P GL
Sbjct: 1062 PSGVTTDASGN-LYIADFN-NRLIRKITPSGLVTTFAGSGAAGSENGNGAAASFNNPFGL 1119

Query: 663  AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
              +A+ N+ YV+D  N+ +R+I   +  V T AG+G+ G+       G +   NSP+ + 
Sbjct: 1120 TTDAQGNI-YVSDANNNTIRKIT-PSGVVTTFAGSGSSGA---ADGIGMAASFNSPYGLA 1174

Query: 723  YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                   +Y+A  G +Q+    T DGV   F+G          ++    F  P  +++  
Sbjct: 1175 TDA-QGNIYVADFG-NQVIRKITPDGVVTTFAGTTGVAGNVNGAAAAAKFNSPYDVAVDV 1232

Query: 783  DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
                +YVAD  +  IR +    G     AG   I        G  +G G+     +P G+
Sbjct: 1233 T-GNVYVADELNQVIRKIT-PAGLVTTFAGSGGI--------GALNGTGTAASFHNPTGI 1282

Query: 843  YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
                 G +YVAD YN+ I+K+ P    V+TLAG G  G  DG   +A    P  +     
Sbjct: 1283 TTDAQGNVYVADLYNNAIRKITPGG-VVTTLAGTGSIGSADGVGTSASFYNPNAVATDAV 1341

Query: 903  GNLFIADTNNNIIR 916
            GN+++ DT N +IR
Sbjct: 1342 GNIYVVDTYNQLIR 1355



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 90/300 (30%), Positives = 129/300 (43%), Gaps = 18/300 (6%)

Query: 617  ISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676
            +S +N    V +   G      GS G  G  +G    ATF+ P G+  +A  NL Y+AD 
Sbjct: 1020 LSPTNSGGAVTSATTGKVSTVAGSVGIAGKANGIGTAATFSGPSGVTTDASGNL-YIADF 1078

Query: 677  ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG 736
             N  +R+I   +  V T AG+G  GS+   G   +    N+P+ +        +Y++ A 
Sbjct: 1079 NNRLIRKIT-PSGLVTTFAGSGAAGSENGNGAAAS---FNNPFGLTTDA-QGNIYVSDAN 1133

Query: 737  QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796
             + I    T  GV   F+G G     +G   +  SF  P G++       IYVAD  +  
Sbjct: 1134 NNTI-RKITPSGVVTTFAGSGSSGAADGIG-MAASFNSPYGLATDAQ-GNIYVADFGNQV 1190

Query: 797  IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
            IR +           G    F       G+ +G  +      P  V     G +YVAD  
Sbjct: 1191 IRKITPD--------GVVTTFAGTTGVAGNVNGAAAAAKFNSPYDVAVDVTGNVYVADEL 1242

Query: 857  NHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            N  I+K+ PA   V+T AG G  G  +G   AA    P GI     GN+++AD  NN IR
Sbjct: 1243 NQVIRKITPAG-LVTTFAGSGGIGALNGTGTAASFHNPTGITTDAQGNVYVADLYNNAIR 1301



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 22/286 (7%)

Query: 633  NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692
            + +  I  +G  G  +G+   A+ N   GL ++   N+ +VAD  NH +R+I      V 
Sbjct: 1531 SLVSTIVGNGSSGAVNGTGTAASLNLCDGLVFDLLGNM-FVADFGNHMIRKITPAT-VVS 1588

Query: 693  TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
            T  G G+ GS      KGT+     P+ +        +++A    +QI    T DG+   
Sbjct: 1589 TFVGTGSPGST---NGKGTAASFYVPYGMAIDAAG-NLFVADQFYNQI-RKITPDGLVTT 1643

Query: 753  FSGD--GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
            F+G   G     +G+ +  T F  P G+++      ++V + ++  IR +      + L 
Sbjct: 1644 FAGSLTGAPGATDGTGAAAT-FRSPRGMAIDA-LGNLFVVE-DNYLIRKITPDAVVTTLA 1700

Query: 811  AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
              G           G  +G G+     HP G+     G +YVAD+YN+ I+K+  A + V
Sbjct: 1701 GNGAA---------GSANGTGNAASFNHPWGIVADAAGNLYVADTYNNLIRKVTSAGS-V 1750

Query: 871  STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            +T AG G A   DG   AA  + P+ I    +GNL++A+ N N+IR
Sbjct: 1751 TTFAGSGAASSVDGTGTAASFNYPSAISIDASGNLYVAELNGNVIR 1796



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 603  PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
            P  L  D   N +++SD+N+N I      G  +     SG  G  DG    A+FN P GL
Sbjct: 1116 PFGLTTDAQGN-IYVSDANNNTIRKITPSG-VVTTFAGSGSSGAADGIGMAASFNSPYGL 1173

Query: 663  AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
            A +A+ N+ YVAD  N  +R+I   +  V T AG  T G          +   NSP+DV 
Sbjct: 1174 ATDAQGNI-YVADFGNQVIRKIT-PDGVVTTFAG--TTGVAGNVNGAAAAAKFNSPYDVA 1229

Query: 723  YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               +   VY+A    +Q+    T  G+   F+G G    LNG+ +   SF  P+GI+   
Sbjct: 1230 VD-VTGNVYVA-DELNQVIRKITPAGLVTTFAGSGGIGALNGTGTA-ASFHNPTGITTDA 1286

Query: 783  DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
                +YVAD  +++IR +    G    LAG   I        G  DG+G+     +P  V
Sbjct: 1287 Q-GNVYVADLYNNAIRKIT-PGGVVTTLAGTGSI--------GSADGVGTSASFYNPNAV 1336

Query: 843  YCAKNGQIYVADSYNHKIKKL 863
                 G IYV D+YN  I+K+
Sbjct: 1337 ATDAVGNIYVVDTYNQLIRKI 1357



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A D+  N L++SD N N ++     G  +  +  SG  G  +G+   A+FN P  L
Sbjct: 139 PFGIATDVQGN-LYVSDVNSN-LIRKITPGGVVTTLAGSGSAGSVNGTGTAASFNTPYSL 196

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
             + + N+ YVAD  N  +R+I      V TLAG  T GS       GT+   N P  V 
Sbjct: 197 TTDMQGNV-YVADYGNQLIRKITPAG-VVTTLAG--TVGSSGFVNGTGTAAKFNYPRSVA 252

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                  VY+A      I    T  GV   F+G G    LNG+ +  T F  P+G+++  
Sbjct: 253 TDAAG-NVYVADQVNQAI-RKITPAGVVTTFAGSGVPGALNGTGTAAT-FYNPTGVTMDA 309

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
               +YVADS++ SIR +    G    LAG   +        G  +G G+     +P  V
Sbjct: 310 Q-GNVYVADSQNHSIRKIT-PAGVVTTLAGTGSM--------GSANGAGTNASFYYPNAV 359

Query: 843 YCAKNGQIYVADSYNHKIKKL 863
                G +Y+AD+ NH I+K+
Sbjct: 360 VADALGNLYIADTNNHLIRKI 380



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 74/227 (32%), Positives = 106/227 (46%), Gaps = 17/227 (7%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
           V T AGN   G        GT+   +SP+ V     +  VY+A AG + I + S V GV 
Sbjct: 60  VSTFAGNA--GIAGNTNATGTAATFHSPFGVAVDA-SGNVYVADAGNNLIRKISPV-GVV 115

Query: 751 RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
             F+G G   + NG+ +   SF  P GI+       +YV+D  S+ IR +    G    L
Sbjct: 116 STFAGSGVAGSANGTGTA-ASFNNPFGIATDVQ-GNLYVSDVNSNLIRKIT-PGGVVTTL 172

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AG            G  +G G+      P  +     G +YVAD  N  I+K+ PA   V
Sbjct: 173 AGSGSA--------GSVNGTGTAASFNTPYSLTTDMQGNVYVADYGNQLIRKITPAG-VV 223

Query: 871 STLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           +TLAG +G +GF +G   AA+ + P  +     GN+++AD  N  IR
Sbjct: 224 TTLAGTVGSSGFVNGTGTAAKFNYPRSVATDAAGNVYVADQVNQAIR 270



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 21/262 (8%)

Query: 603  PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGS-SGEEGLRDGSFDDATFNRPQG 661
            P  +AID   N LF++D  +N+I     DG      GS +G  G  DG+   ATF  P+G
Sbjct: 1611 PYGMAIDAAGN-LFVADQFYNQIRKITPDGLVTTFAGSLTGAPGATDGTGAAATFRSPRG 1669

Query: 662  LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDV 721
            +A +A  NL  V D  N+ +R+I   +  V TLAGNG  GS       G +   N PW +
Sbjct: 1670 MAIDALGNLFVVED--NYLIRKIT-PDAVVTTLAGNGAAGS---ANGTGNAASFNHPWGI 1723

Query: 722  CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
                    +Y+A    + I + ++   VT  F+G G   +++G+ +   SF  PS IS+ 
Sbjct: 1724 VADAAG-NLYVADTYNNLIRKVTSAGSVT-TFAGSGAASSVDGTGTA-ASFNYPSAISID 1780

Query: 782  PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                 +YVA+   + IR ++   G    +AG            G  +G+G      +   
Sbjct: 1781 AS-GNLYVAELNGNVIRKIS-PAGVVTTIAGSG--------ASGIANGIGKAATFGNLYS 1830

Query: 842  VYCAKNGQIYVADSYNHKIKKL 863
            +    +G +YVAD Y + I+K+
Sbjct: 1831 IATDASGDVYVADQYKYIIRKI 1852



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 26/314 (8%)

Query: 606  LAIDILNNRLFISD-SNH--NRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
            L  D+L N +F++D  NH   +I    +   F+     +G  G  +G    A+F  P G+
Sbjct: 1560 LVFDLLGN-MFVADFGNHMIRKITPATVVSTFV----GTGSPGSTNGKGTAASFYVPYGM 1614

Query: 663  AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
            A +A  NL +VAD   + +R+I   +  V T AG+ T       G  G +    SP  + 
Sbjct: 1615 AIDAAGNL-FVADQFYNQIRKIT-PDGLVTTFAGSLTGAPGATDG-TGAAATFRSPRGMA 1671

Query: 723  YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               +     + +   + +    T D V    +G+G   + NG+ +   SF  P GI ++ 
Sbjct: 1672 IDALGN---LFVVEDNYLIRKITPDAVVTTLAGNGAAGSANGTGNA-ASFNHPWGI-VAD 1726

Query: 783  DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
                +YVAD+ ++ IR +    G     AG               DG G+     +P  +
Sbjct: 1727 AAGNLYVADTYNNLIRKVT-SAGSVTTFAGSGAA--------SSVDGTGTAASFNYPSAI 1777

Query: 843  YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
                +G +YVA+   + I+K+ PA   V+T+AG G +G  +G   AA       I    +
Sbjct: 1778 SIDASGNLYVAELNGNVIRKISPAG-VVTTIAGSGASGIANGIGKAATFGNLYSIATDAS 1836

Query: 903  GNLFIADTNNNIIR 916
            G++++AD    IIR
Sbjct: 1837 GDVYVADQYKYIIR 1850



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 87/314 (27%), Positives = 135/314 (42%), Gaps = 35/314 (11%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A D   N +++SD N+N I   +L G  +     SG     +G+   A+F     L
Sbjct: 581 PTGVATDPSGN-IYVSDYNNNLIRKINLAG-VVSTFAGSGTAASVNGTGVAASFLHAYRL 638

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
             +A+ N+ YV D   + +R+I      V TLAG+G  GS       GT+   ++P+D+ 
Sbjct: 639 TTDAQSNV-YVID--GNMIRKITPAG-VVTTLAGSGDSGS---ADGTGTAASFHTPYDLT 691

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                  VY+A    +Q     T +GV   F+G          ++    F  P GI+   
Sbjct: 692 TDA-QGNVYVA-DNFNQTIRKITREGVVNTFAGTSGSSGFVNGTAAAAKFKNPIGIATDT 749

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
               +YVAD+ + +IR +    G    LAG            G +D          P  V
Sbjct: 750 Q-GNVYVADNGNLAIRKIT-PAGVVTTLAGS-----------GFKD----------PFSV 786

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902
                G +YV D     ++K+ P +  V+ LAG G AG  +GA   +    P  +     
Sbjct: 787 ATDAQGNVYVMDYSTPILRKILP-TGTVTILAGDGSAGSANGAGTVSNFYVPNALATDAL 845

Query: 903 GNLFIADTNNNIIR 916
           GN+++AD  NN+IR
Sbjct: 846 GNIYVADAGNNLIR 859



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)

Query: 688 NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD 747
           N  V TLAG      +  G   GT+   +SP  V   P +  +Y++    + I     + 
Sbjct: 553 NVQVSTLAGKAGSAGNANG--TGTAATFSSPTGVATDP-SGNIYVSDYNNNLI-RKINLA 608

Query: 748 GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS 807
           GV   F+G G   ++NG+  +  SF     ++       +YV D   + IR +      +
Sbjct: 609 GVVSTFAGSGTAASVNGTG-VAASFLHAYRLTTDAQ-SNVYVIDG--NMIRKITPAGVVT 664

Query: 808 RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPAS 867
            L   GD          G  DG G+      P  +     G +YVAD++N  I+K+    
Sbjct: 665 TLAGSGDS---------GSADGTGTAASFHTPYDLTTDAQGNVYVADNFNQTIRKIT-RE 714

Query: 868 NRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
             V+T AG  G +GF +G A AA+   P GI     GN+++AD  N  IR
Sbjct: 715 GVVNTFAGTSGSSGFVNGTAAAAKFKNPIGIATDTQGNVYVADNGNLAIR 764



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 98/234 (41%), Gaps = 33/234 (14%)

Query: 691  VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
            V T AG+G  GS       GTS   N P DV           A+  +   +    ++ + 
Sbjct: 2028 VTTFAGSGAAGS---VNSTGTSATFNGPLDV-----------AVDAEGNTYVLDQLNNLV 2073

Query: 751  RAFSGDGYERNLNGSSSLNT--------SFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
            R  +  G    L GS S  +        +F  P+G+++      IYVAD  ++ IR +  
Sbjct: 2074 RKITPAGVVSTLAGSGSSGSANGAATAATFNHPTGLAVDAA-GNIYVADQGNNMIRKIT- 2131

Query: 803  KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
              G    LAG            G  DG+G+      P GV    +G +YVAD  N  ++K
Sbjct: 2132 AAGVVTTLAGK--------LTAGSADGVGAAASFNLPAGVAVDASGNVYVADLLNSMVRK 2183

Query: 863  LDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            + P    V+TLAG   AG  DG   AA    P  +     GN+ +AD  NN IR
Sbjct: 2184 ITP-DGTVTTLAGSTSAGSADGTGAAAGFHYPTNLQVDDQGNIIVADQLNNKIR 2236



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 31/290 (10%)

Query: 627  VTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDF 686
            VT      +     SG  G  + +   ATFN P  +A +A+ N  YV D  N+ +R+I  
Sbjct: 2020 VTSAGTAVVTTFAGSGAAGSVNSTGTSATFNGPLDVAVDAEGNT-YVLDQLNNLVRKITP 2078

Query: 687  VNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
                V TLAG+G+ GS        T+   N P  +        +Y+A  G + I    T 
Sbjct: 2079 AG-VVSTLAGSGSSGS---ANGAATAATFNHPTGLAVDAAG-NIYVADQGNNMI-RKITA 2132

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
             GV    +G     + +G  +   SF  P+G+++      +YVAD  +S +R +    G 
Sbjct: 2133 AGVVTTLAGKLTAGSADGVGAA-ASFNLPAGVAVDAS-GNVYVADLLNSMVRKIT-PDGT 2189

Query: 807  SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
               LAG            G  DG G+     +P  +     G I VAD  N+KI+K+ PA
Sbjct: 2190 VTTLAGSTSA--------GSADGTGAAAGFHYPTNLQVDDQGNIIVADQLNNKIRKISPA 2241

Query: 867  SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
               V+T+A  G  GF +          P  +  ++ G +++AD N+N I+
Sbjct: 2242 G-VVTTIA--GPTGFNN----------PYDVAISKTGIIYVADYNSNSIK 2278



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 78/276 (28%), Positives = 116/276 (42%), Gaps = 61/276 (22%)

Query: 654  ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
            ATFN P GLA +A  N +YVAD  N+ +R+I      V TLAG  T GS       G + 
Sbjct: 2101 ATFNHPTGLAVDAAGN-IYVADQGNNMIRKITAAG-VVTTLAGKLTAGS---ADGVGAAA 2155

Query: 714  LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS-- 771
              N P  V           A+     ++    ++ + R  + DG    L GS+S  ++  
Sbjct: 2156 SFNLPAGV-----------AVDASGNVYVADLLNSMVRKITPDGTVTTLAGSTSAGSADG 2204

Query: 772  ------FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFG 825
                  F  P+ + +  D   I VAD  ++ IR ++   G    +AG     P       
Sbjct: 2205 TGAAAGFHYPTNLQVD-DQGNIIVADQLNNKIRKIS-PAGVVTTIAG-----PTG----- 2252

Query: 826  DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
                        +P  V  +K G IYVAD  ++ IK + P S  V+TLA     GF    
Sbjct: 2253 ----------FNNPYDVAISKTGIIYVADYNSNSIKAISP-SGGVTTLA----TGF---- 2293

Query: 886  ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
                  + P G+     G +++AD  +N IR + +N
Sbjct: 2294 ------ANPGGVAIDSRGVIYVADYGHNTIRKITIN 2323



 Score = 50.1 bits (118), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 10/176 (5%)

Query: 747  DGVTRAFSGDGYERNLNGSSSLNTS----FAQPSGISLSPDFMEIYVADSESSSIRALNL 802
            D   RA  G G   N++ ++   T+    F   +  S++ +  +IY+ +   + +  +N 
Sbjct: 1957 DTQIRAVVGSGTSGNVSVTTPAGTATLAGFTYTASPSIAYNTPQIYMVNMAITPLVPVN- 2015

Query: 803  KTGGSRLLAGGDPIFPD--NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKI 860
               G+ + + G  +          G  +  G+      PL V     G  YV D  N+ +
Sbjct: 2016 --SGTAVTSAGTAVVTTFAGSGAAGSVNSTGTSATFNGPLDVAVDAEGNTYVLDQLNNLV 2073

Query: 861  KKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            +K+ PA   VSTLAG G +G  +GAA AA  + P G+     GN+++AD  NN+IR
Sbjct: 2074 RKITPAG-VVSTLAGSGSSGSANGAATAATFNHPTGLAVDAAGNIYVADQGNNMIR 2128



 Score = 50.1 bits (118), Expect = 0.007,   Method: Composition-based stats.
 Identities = 71/281 (25%), Positives = 112/281 (39%), Gaps = 42/281 (14%)

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI---------GSSGEEGLRDGSFDDATF 656
           +A   L+     +D+  N  V+   DGN I +I           SG+ G  DG+   A+F
Sbjct: 628 VAASFLHAYRLTTDAQSNVYVI---DGNMIRKITPAGVVTTLAGSGDSGSADGTGTAASF 684

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
           + P  L  +A+ N+ YVAD  N  +R+I      V T AG  +  S +  G    ++  N
Sbjct: 685 HTPYDLTTDAQGNV-YVADNFNQTIRKIT-REGVVNTFAGT-SGSSGFVNGTAAAAKFKN 741

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
                   PI     IA   Q  ++     +   R  +  G    L GS      F  P 
Sbjct: 742 --------PIG----IATDTQGNVYVADNGNLAIRKITPAGVVTTLAGSG-----FKDPF 784

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
            ++       +YV D  +  +R + L TG   +LAG            G  +G G+    
Sbjct: 785 SVATDAQ-GNVYVMDYSTPILRKI-LPTGTVTILAGDGSA--------GSANGAGTVSNF 834

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG 877
             P  +     G IYVAD+ N+ I+K+   +  ++ +   G
Sbjct: 835 YVPNALATDALGNIYVADAGNNLIRKITTGNYSITPMLPAG 875



 Score = 48.1 bits (113), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 869 RVSTLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           +VSTLAG  G AG  +G   AA  S P G+    +GN++++D NNN+IR ++L
Sbjct: 555 QVSTLAGKAGSAGNANGTGTAATFSSPTGVATDPSGNIYVSDYNNNLIRKINL 607


>gi|424869138|ref|ZP_18292858.1| uncharacterized protein [Leptospirillum sp. Group II 'C75']
 gi|124514239|gb|EAY55753.1| conserved protein of unknown function [Leptospirillum rubarum]
 gi|387220840|gb|EIJ75456.1| uncharacterized protein [Leptospirillum sp. Group II 'C75']
          Length = 389

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 25/288 (8%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           GS      RDG   +A FN P+G+A +     LYVAD+ N+ +R+ID    TV T+AG+ 
Sbjct: 113 GSDHRARYRDGVGANARFNNPEGMAISPDGKTLYVADSRNNMIRKIDLATKTVSTIAGHS 172

Query: 699 TKGS-DYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
              S D  G E G      +P  +   P  + +Y+A +G + I +           +G G
Sbjct: 173 FPSSGDGVGKEAG----FETPRGLAISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAG 228

Query: 758 YERNLNGSS---SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGD 814
             + ++GS+    +  +F +P  +++S D   +Y+AD+ ++ IR + L T     LA G 
Sbjct: 229 --KLMSGSADGVGVQATFHEPRSLAISGDGQVLYIADTRNNLIRKMVLATNSVSTLA-GH 285

Query: 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           P FP  L      +G G +    HP+ V    N ++YVAD  N  I+ +D ++  VST+A
Sbjct: 286 PGFPGTL------NGPGPDAYFYHPVSVTIDGN-KLYVADGANADIRMVDLSTGVVSTVA 338

Query: 875 ------GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
                 G+  AG +DG+ +      P G +   +G LF+ADT  + IR
Sbjct: 339 GATLNGGVPIAGREDGSGVEGHFQFP-GAVTVFHGVLFVADTPADTIR 385



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 133/286 (46%), Gaps = 57/286 (19%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           GS  E G  DG   +A F  PQG+   A    +Y+ADT           ND +R ++ NG
Sbjct: 42  GSFHERGAIDGPGREARFEFPQGI-LAAPDGTIYIADTG----------NDMIRKISSNG 90

Query: 699 TKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758
             G+                      P   +++           H +VD      +G  +
Sbjct: 91  LSGA---------------------TPTPAELH-----------HLSVD--VEDIAGSDH 116

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
                     N  F  P G+++SPD   +YVADS ++ IR ++L T     +AG    FP
Sbjct: 117 RARYRDGVGANARFNNPEGMAISPDGKTLYVADSRNNMIRKIDLATKTVSTIAGHS--FP 174

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIG 877
            +       DG+G E   + P G+  + +G+ +YVADS N+ I+K+D A+N V+TLAG G
Sbjct: 175 SS------GDGVGKEAGFETPRGLAISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAG 228

Query: 878 K--AGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
           K  +G  DG  + A   EP  +  + +G  L+IADT NN+IR + L
Sbjct: 229 KLMSGSADGVGVQATFHEPRSLAISGDGQVLYIADTRNNLIRKMVL 274



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 119/267 (44%), Gaps = 18/267 (6%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +AI      L+++DS +N I   DL    +  I         DG   +A F  P+GL
Sbjct: 133 PEGMAISPDGKTLYVADSRNNMIRKIDLATKTVSTIAGHSFPSSGDGVGKEAGFETPRGL 192

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A +     LYVAD+ N+A+R+ID   +TV TLAG G   S    G  G     + P  + 
Sbjct: 193 AISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAGKLMSGSADG-VGVQATFHEPRSLA 251

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLS 781
                + +YIA    + I +           +G  G+   LNG    +  F  P  +S++
Sbjct: 252 ISGDGQVLYIADTRNNLIRKMVLATNSVSTLAGHPGFPGTLNGPGP-DAYFYHP--VSVT 308

Query: 782 PDFMEIYVADSESSSIRALNLKTG-----GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
            D  ++YVAD  ++ IR ++L TG         L GG PI        G  DG G E   
Sbjct: 309 IDGNKLYVADGANADIRMVDLSTGVVSTVAGATLNGGVPI-------AGREDGSGVEGHF 361

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKL 863
           Q P G     +G ++VAD+    I+++
Sbjct: 362 QFP-GAVTVFHGVLFVADTPADTIREV 387


>gi|290982010|ref|XP_002673724.1| NHL repeat-containing protein [Naegleria gruberi]
 gi|284087309|gb|EFC40980.1| NHL repeat-containing protein [Naegleria gruberi]
          Length = 456

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 166/332 (50%), Gaps = 25/332 (7%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRI-VVTDLDGNFIVQIGSSGEEGLRDGSF--DD 653
           ++ L FP  +A+D   N ++I+D+ ++RI   T L G  +  I  + EEG    +     
Sbjct: 135 STSLLFPTSIAVDSSGN-IYIADTQNHRIRKFTALTGK-LSTIAGTEEEGYNGDNIIATT 192

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A  + P G+A ++  N+ Y+AD++NH +R+I   N  + T+AG+G  GS    G    + 
Sbjct: 193 AKLSSPTGVALDSIGNV-YIADSQNHRIRKITISNGKISTIAGDGDAGSPLYDGLSAIAS 251

Query: 714 LLNSPWDVCY-KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS---SSLN 769
            LN+P  V   +  +  VY A     +I + ++    T A +   Y   +  +     L 
Sbjct: 252 SLNNPTSVAVDQSSSNTVYFADTNNSKIRKITSSKLYTVAGTDYTYSPYIQPNLIYEGLA 311

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL--LAGG-DPIFPDNLFKFGD 826
                 S IS++    +IY  ++  +++R + ++ G   +  +AGG  P FP    +F  
Sbjct: 312 QYIKISSPISVAASGGKIYFIENLINTVRQVVVQNGYYTMTTIAGGCRPGFPSTT-EF-- 368

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDG 884
                    L  P G+    NG +YVAD  N +IKK++P +  +ST+AG   AGF   +G
Sbjct: 369 -------ACLDSPFGIAIGPNGDVYVADKSNARIKKINPTTKTISTIAGGSGAGFDGDNG 421

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            A+ + L++P GI    NG ++IADT NN IR
Sbjct: 422 PAILSSLNDPCGIAVQSNGAVYIADTKNNRIR 453



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 31/285 (10%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK-GTSQLLNS 717
           P  +A ++  N+ Y+ADT+NH +R+   +   + T+AG   +G  Y G     T+  L+S
Sbjct: 141 PTSIAVDSSGNI-YIADTQNHRIRKFTALTGKLSTIAGTEEEG--YNGDNIIATTAKLSS 197

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN--LNGSSSLNTSFAQP 775
           P  V    I   VYIA +  H+I + +  +G     +GDG   +   +G S++ +S   P
Sbjct: 198 PTGVALDSIGN-VYIADSQNHRIRKITISNGKISTIAGDGDAGSPLYDGLSAIASSLNNP 256

Query: 776 SGISLSPDFME-IYVADSESSSIRALNLKTGGSRL--LAGGD----PIFPDNLFKFGDRD 828
           + +++       +Y AD+ +S IR    K   S+L  +AG D    P    NL      +
Sbjct: 257 TSVAVDQSSSNTVYFADTNNSKIR----KITSSKLYTVAGTDYTYSPYIQPNLI----YE 308

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL--DPASNRVSTLAGIGKAGFKDGAA 886
           G+   + +  P+ V  A  G+IY  ++  + ++++        ++T+AG  + GF     
Sbjct: 309 GLAQYIKISSPISV-AASGGKIYFIENLINTVRQVVVQNGYYTMTTIAGGCRPGFPSTTE 367

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931
            A  L  P GI    NG++++AD +N  I+     K  P  +T+ 
Sbjct: 368 FAC-LDSPFGIAIGPNGDVYVADKSNARIK-----KINPTTKTIS 406



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 16/164 (9%)

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDP--IFPDNLFK 823
           ++ +TS   P+ I++      IY+AD+++  IR     TG    +AG +      DN+  
Sbjct: 132 AATSTSLLFPTSIAVDSS-GNIYIADTQNHRIRKFTALTGKLSTIAGTEEEGYNGDNI-- 188

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG--F 881
                 + +   L  P GV     G +Y+ADS NH+I+K+  ++ ++ST+AG G AG   
Sbjct: 189 ------IATTAKLSSPTGVALDSIGNVYIADSQNHRIRKITISNGKISTIAGDGDAGSPL 242

Query: 882 KDG-AALAAQLSEPAGII--EAQNGNLFIADTNNNIIRYLDLNK 922
            DG +A+A+ L+ P  +   ++ +  ++ ADTNN+ IR +  +K
Sbjct: 243 YDGLSAIASSLNNPTSVAVDQSSSNTVYFADTNNSKIRKITSSK 286



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
           +G   G  +   L  P  +    +G IY+AD+ NH+I+K    + ++ST+AG  + G+  
Sbjct: 126 YGGDSGAATSTSLLFPTSIAVDSSGNIYIADTQNHRIRKFTALTGKLSTIAGTEEEGYNG 185

Query: 884 GAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
              +A  A+LS P G+     GN++IAD+ N+ IR + +
Sbjct: 186 DNIIATTAKLSSPTGVALDSIGNVYIADSQNHRIRKITI 224


>gi|254249877|ref|ZP_04943197.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia cenocepacia
           PC184]
 gi|124876378|gb|EAY66368.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia cenocepacia
           PC184]
          Length = 193

 Score =  115 bits (287), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 1/145 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P F     W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PAFTGIDRWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + + +A+ R+ I +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAKNVADAIRRFDIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKK 575
              GEG     +  +  AL   G++
Sbjct: 161 TRYGEGGYDKTEAAIRGALAQAGEE 185


>gi|377811261|ref|YP_005043701.1| redoxin domain-containing protein [Burkholderia sp. YI23]
 gi|357940622|gb|AET94178.1| redoxin domain-containing protein [Burkholderia sp. YI23]
          Length = 584

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 4/160 (2%)

Query: 418 ISDVENRKTTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPD 474
           I  V  +   P+   +P       WLN+ PL    +L+GKVVV++FWTY CINC+  LP 
Sbjct: 254 IMRVSTQAALPVQGRLPSLDGATTWLNSPPLS-ANELRGKVVVVNFWTYSCINCLRTLPY 312

Query: 475 LEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVN 534
           L+   ++Y D    V+GVH+ +F  E+D   ++ A+    I +PV  D D  +WR  G  
Sbjct: 313 LKTWAQRYADDGLVVIGVHTPEFGFERDTGNVKRALANLNIRYPVAIDNDYGIWRAFGNQ 372

Query: 535 SWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGK 574
            WP F +V   G++     GEG   + +D + + L   GK
Sbjct: 373 YWPAFYIVDAQGRVRFHHFGEGGYGEAEDAIRSLLADKGK 412


>gi|290990564|ref|XP_002677906.1| NHL domain-containing protein kinase [Naegleria gruberi]
 gi|284091516|gb|EFC45162.1| NHL domain-containing protein kinase [Naegleria gruberi]
          Length = 2733

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 176/389 (45%), Gaps = 75/389 (19%)

Query: 589 KDNDPRLFTSP-LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR 647
           ++ D  L TS  L FP  +A+   N  ++I+D+ ++RI   + +G +I  +  SG  G  
Sbjct: 503 QNGDGNLATSAQLNFPSGVAVS-SNGDIYIADTENHRIRKIETNG-YIATVAGSGASGYS 560

Query: 648 D--GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ 705
              G    A F +PQG+A ++   + Y+ADTENH +R+I   N  + T+AG G+ G +  
Sbjct: 561 GDGGLLTSAKFQQPQGVAVSSNGEI-YIADTENHVVRKISTSN-VLSTIAGTGSYGYNGD 618

Query: 706 GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG---DGYERNL 762
           GG   T++L  SP  V      E V+IA    H+I + +  DG      G   +GY+ + 
Sbjct: 619 GGLAITAKLF-SPIGVAISSSGE-VFIADNNNHRIRKIAK-DGYISTIVGTGLNGYDGD- 674

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
            G  + N     P G++LSP   E+++AD  +  IR +      S +   G+       F
Sbjct: 675 -GDLATNAKLGNPQGVTLSPT-GELFIADQNNHRIRKVASNGYISTVAGNGN-------F 725

Query: 823 KFGDRDGMGSEVLLQHPLGV--------YCA----------------------------- 845
            F     + +   L  P G+        Y A                             
Sbjct: 726 GFSGDGDLATNAELNSPSGIAFSSIGTMYIADRLNRVIRRVISGNISTIAGGVGDGGPAT 785

Query: 846 ------------KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQL 891
                         G+IY+AD+ NH+I+K+     ++ST+AG G  G+    G A+ A+L
Sbjct: 786 GGYIQAQSFDISSTGEIYIADTENHRIRKVSTLG-KISTIAGTGAMGYSGDGGLAITAKL 844

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           S P G+  +  G +FIAD +N+ IR + L
Sbjct: 845 SSPVGVAVSSTGEVFIADRDNHRIRKVTL 873



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 19/283 (6%)

Query: 638 IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
           +GS G  G  D +   A  N  + +A N+  ++ Y+ADT N+ +R++ F    + T+AG 
Sbjct: 441 VGSEGYNG-DDIAATSALLNYARSIAVNSNGDV-YIADTYNNRIRKVSFSTGIISTVAGT 498

Query: 698 GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
           G  G +   G   TS  LN P  V     N  +YIA    H+I +  T +G     +G G
Sbjct: 499 GIAGQN-GDGNLATSAQLNFPSGVAVSS-NGDIYIADTENHRIRKIET-NGYIATVAGSG 555

Query: 758 YERNLNGSSSLNTS--FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDP 815
                +G   L TS  F QP G+++S +  EIY+AD+E+  +R ++     S +   G  
Sbjct: 556 -ASGYSGDGGLLTSAKFQQPQGVAVSSN-GEIYIADTENHVVRKISTSNVLSTIAGTGS- 612

Query: 816 IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
                 + +    G+     L  P+GV  + +G++++AD+ NH+I+K+      +ST+ G
Sbjct: 613 ------YGYNGDGGLAITAKLFSPIGVAISSSGEVFIADNNNHRIRKI-AKDGYISTIVG 665

Query: 876 IGKAGFKDGAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            G  G+     LA  A+L  P G+  +  G LFIAD NN+ IR
Sbjct: 666 TGLNGYDGDGDLATNAKLGNPQGVTLSPTGELFIADQNNHRIR 708



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 169/357 (47%), Gaps = 49/357 (13%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFD-DATFN 657
           L  P  +AID  N   +ISDS ++RI     +G  I  I  +G  G   DG+   +A   
Sbjct: 203 LYAPACIAID-SNGEFYISDSMNHRIRKIATNG-IITTIAGTGTHGYDGDGALAINAQLY 260

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            P G+  N+  ++ Y+AD+ N+ +R+I      + T+AGNG  G    GG   ++QL  +
Sbjct: 261 SPTGVVVNSNGDV-YIADSGNNRIRKIS--KGYISTVAGNGIAGYSGDGGLSTSAQLA-T 316

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           P  V    +N ++ IA +  ++I + +T   ++       +  N+  +S+       P G
Sbjct: 317 PQSVAIN-LNGEIIIADSNNNRIRKIATNGKISTIAGTSSFGNNIPATSAS----ISPVG 371

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI--------FPDNLF------- 822
           +   P      +  ++ S IR ++L T    L++G D +        F + L+       
Sbjct: 372 V---PTLYNNKIIFADESQIRQVDLATNIISLISGTDYLASPTAAMYFNNELYILYSKLN 428

Query: 823 ----------------KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
                            +   D   +  LL +   +    NG +Y+AD+YN++I+K+  +
Sbjct: 429 LDKPKINIVSRVVGSEGYNGDDIAATSALLNYARSIAVNSNGDVYIADTYNNRIRKVSFS 488

Query: 867 SNRVSTLAGIGKAGFKDGAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           +  +ST+AG G AG      LA  AQL+ P+G+  + NG+++IADT N+ IR ++ N
Sbjct: 489 TGIISTVAGTGIAGQNGDGNLATSAQLNFPSGVAVSSNGDIYIADTENHRIRKIETN 545



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 21/235 (8%)

Query: 687 VNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
           +N   R +   G  G D       TS LLN    +     N  VYIA    ++I + S  
Sbjct: 434 INIVSRVVGSEGYNGDDI----AATSALLNYARSIAVNS-NGDVYIADTYNNRIRKVSFS 488

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQ---PSGISLSPDFMEIYVADSESSSIRALNLK 803
            G+    +G G     NG  +L TS AQ   PSG+++S +  +IY+AD+E+  IR +   
Sbjct: 489 TGIISTVAGTGIAGQ-NGDGNLATS-AQLNFPSGVAVSSN-GDIYIADTENHRIRKIETN 545

Query: 804 TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
              + +   G   +       GD  G+ +    Q P GV  + NG+IY+AD+ NH ++K+
Sbjct: 546 GYIATVAGSGASGYS------GD-GGLLTSAKFQQPQGVAVSSNGEIYIADTENHVVRKI 598

Query: 864 DPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
              SN +ST+AG G  G+    G A+ A+L  P G+  + +G +FIAD NN+ IR
Sbjct: 599 -STSNVLSTIAGTGSYGYNGDGGLAITAKLFSPIGVAISSSGEVFIADNNNHRIR 652



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 128/280 (45%), Gaps = 39/280 (13%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +Y+AD+ N+ +R+I   N  + T+AG GT+G D   G   TS  LN P            
Sbjct: 124 IYIADSNNNRIRKIA-TNGIITTIAGTGTRGYD-GDGALATSAKLNFPSS---------- 171

Query: 731 YIAMAGQHQIWEHSTVDGV-TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
            IA+     I   ST+ G  T ++ GD        + +       P+ I++  +  E Y+
Sbjct: 172 -IAITTNGNI---STIAGTGTGSYGGDN-------AIATGAQLYAPACIAIDSN-GEFYI 219

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG-MGSEVLLQHPLGVYCAKNG 848
           +DS +  IR +      + +   G   +        D DG +     L  P GV    NG
Sbjct: 220 SDSMNHRIRKIATNGIITTIAGTGTHGY--------DGDGALAINAQLYSPTGVVVNSNG 271

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLF 906
            +Y+ADS N++I+K+      +ST+AG G AG+    G + +AQL+ P  +    NG + 
Sbjct: 272 DVYIADSGNNRIRKISKG--YISTVAGNGIAGYSGDGGLSTSAQLATPQSVAINLNGEII 329

Query: 907 IADTNNNIIRYLDLNKEEPELQ-TLELKGVQPPTPKSRSP 945
           IAD+NNN IR +  N +   +  T       P T  S SP
Sbjct: 330 IADSNNNRIRKIATNGKISTIAGTSSFGNNIPATSASISP 369



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 30/310 (9%)

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSF-DDATFNRPQGLAYNAKKNLL 671
            LFI+D N++RI     +G +I  +  +G  G   DG    +A  N P G+A+ +    +
Sbjct: 696 ELFIADQNNHRIRKVASNG-YISTVAGNGNFGFSGDGDLATNAELNSPSGIAF-SSIGTM 753

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           Y+AD  N  +R +  ++  + T+AG    G    GG      +    +D+       ++Y
Sbjct: 754 YIADRLNRVIRRV--ISGNISTIAGGVGDGGPATGG-----YIQAQSFDI---SSTGEIY 803

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           IA    H+I + ST+  ++          + +G  ++    + P G+++S    E+++AD
Sbjct: 804 IADTENHRIRKVSTLGKISTIAGTGAMGYSGDGGLAITAKLSSPVGVAVSST-GEVFIAD 862

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL-LQHPLGVYCAKNGQI 850
            ++  IR + L    + +   G   F        + DG+ ++   L  P  V     G+I
Sbjct: 863 RDNHRIRKVTLSGIITTIAGNGTSGF--------NSDGIEAKFAQLNSPSSV-TISGGEI 913

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL--AAQLSEPAGIIEAQNGNLFIA 908
           Y+AD+ NH+I+++   +  + T+AG G  G+     L   AQL+ P+G+  +    ++IA
Sbjct: 914 YIADTNNHRIRQISN-TGIIKTIAGNGFGGYIGDGVLPPNAQLNSPSGVAISSTAEIYIA 972

Query: 909 DTNNNIIRYL 918
           +  N  IR L
Sbjct: 973 E--NKRIRKL 980



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 36/269 (13%)

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
           ++A  + P  LA ++    L+  +  ++ +R+I      + T+AG GT      G     
Sbjct: 48  NEAITSYPCQLAISSISGDLFFGEVVSNRIRKITSSTGVISTIAGTGTGAYGGDGSMATA 107

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771
           +QL   P+ V    +  ++YIA +  ++I + +T +G+    +G G  R  +G  +L TS
Sbjct: 108 AQLF-YPYGVALS-LGGEIYIADSNNNRIRKIAT-NGIITTIAGTG-TRGYDGDGALATS 163

Query: 772 --FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
                PS I+++ +     +A + + S        GG   +A G  ++            
Sbjct: 164 AKLNFPSSIAITTNGNISTIAGTGTGSY-------GGDNAIATGAQLYA----------- 205

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-AL 887
                    P  +    NG+ Y++DS NH+I+K+   +  ++T+AG G  G+  DGA A+
Sbjct: 206 ---------PACIAIDSNGEFYISDSMNHRIRKI-ATNGIITTIAGTGTHGYDGDGALAI 255

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            AQL  P G++   NG+++IAD+ NN IR
Sbjct: 256 NAQLYSPTGVVVNSNGDVYIADSGNNRIR 284


>gi|445497988|ref|ZP_21464843.1| cytochrome c assembly protein DsbD [Janthinobacterium sp. HH01]
 gi|444787983|gb|ELX09531.1| cytochrome c assembly protein DsbD [Janthinobacterium sp. HH01]
          Length = 603

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           +    ++WLN+ PL   + LKGKVV++DFWTY CINC+  +P ++   +KY+D    V+G
Sbjct: 289 QLTGAVEWLNSTPLTAEQ-LKGKVVLVDFWTYSCINCLRTMPYVKAWAEKYRDQGLVVIG 347

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           VH+ +F  E+D+  +R A+   GI++PV  D +  +WR  G   WP    +   G++   
Sbjct: 348 VHAPEFAFERDIGNVRKAIKDLGITYPVAVDNNFAIWRAFGNQYWPAHYFIDAKGQIRHH 407

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNT 581
             GEG     + +++  L   G+K + ++ 
Sbjct: 408 HFGEGEYAQSEQVIQQLLEEAGRKDVANSV 437


>gi|378763926|ref|YP_005192542.1| putative cytochrome c biogenesis protein [Sinorhizobium fredii
           HH103]
 gi|365183554|emb|CCF00403.1| putative cytochrome c biogenesis protein [Sinorhizobium fredii
           HH103]
          Length = 584

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 4/150 (2%)

Query: 423 NRKTTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLE 479
           +R   P+   FP+    ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P +    
Sbjct: 259 HRSDLPVEGTFPSLDGAVEWLNSEPLTVEQ-LRGKVVLVDFWTYSCINCIRTVPYVRAWA 317

Query: 480 KKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTF 539
           +KY+D    V+GVH+ +F  EK ++ ++ AV  +GI +PV  D D  +WR  G + WP  
Sbjct: 318 EKYRDQGLVVIGVHAPEFAFEKRIDNVKRAVKDFGIGYPVAIDNDFAIWRAFGNSYWPAH 377

Query: 540 AVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
             +   G++     GEG     + +++  L
Sbjct: 378 YFIDAEGRIRHHHFGEGDYAQSERVIQELL 407


>gi|399037608|ref|ZP_10734313.1| cytochrome c biogenesis protein [Rhizobium sp. CF122]
 gi|398064796|gb|EJL56467.1| cytochrome c biogenesis protein [Rhizobium sp. CF122]
          Length = 588

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 4/161 (2%)

Query: 428 PIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           P++  F +    ++WLN+ PL   ++L+GKVV++DFWTY CINC+  +P L    +KY+D
Sbjct: 268 PVLGRFQSLDGAVEWLNSKPLT-AKELRGKVVLVDFWTYSCINCIRTIPYLRAWAEKYRD 326

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+GVHS +F  EK ++ +R A+ +  I +PV  D +  +WR  G N WP    +  
Sbjct: 327 QGLVVIGVHSPEFAFEKRIDNVRQAIDKSQIGYPVAIDNNFKIWRAFGNNYWPAHYFIDA 386

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
            G++     GEG  +  + L++  L      K +D   + L
Sbjct: 387 KGQIRHTQFGEGDYEQSERLIQDLLADAAGSKKVDTATVVL 427


>gi|170737377|ref|YP_001778637.1| redoxin domain-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169819565|gb|ACA94147.1| Redoxin domain protein [Burkholderia cenocepacia MC0-3]
          Length = 193

 Score =  114 bits (286), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P F     W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PAFTGIDRWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + + +A+ R+ I +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAKNVADAIKRFDIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  +  AL
Sbjct: 161 TRYGEGGYDKTEAAIRGAL 179


>gi|365856297|ref|ZP_09396319.1| antioxidant, AhpC/TSA family [Acetobacteraceae bacterium AT-5844]
 gi|363718241|gb|EHM01586.1| antioxidant, AhpC/TSA family [Acetobacteraceae bacterium AT-5844]
          Length = 588

 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 5/133 (3%)

Query: 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           + WLN++PL     L+GKVV++DFWTY CINC+   P L    ++Y+D    VVGVH+ +
Sbjct: 281 VQWLNSSPLT-AEGLRGKVVLVDFWTYSCINCIRTTPYLRAWAERYQDQGLVVVGVHTPE 339

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F  EK  E +R AV  +GI++PV  D D  +WR    N+WP F +V   G++     GEG
Sbjct: 340 FAFEKRGENVRRAVSDFGITYPVAVDSDFRIWRAWRNNAWPAFYLVDAKGRVRYSHFGEG 399

Query: 557 HRKDLDDLVEAAL 569
                 D  EAA+
Sbjct: 400 RY----DRTEAAI 408


>gi|290971766|ref|XP_002668650.1| predicted protein [Naegleria gruberi]
 gi|284082136|gb|EFC35906.1| predicted protein [Naegleria gruberi]
          Length = 728

 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 32/316 (10%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKN 669
           NN ++I+D  ++RI     +GN IV I  +G  G    +G    A  N P G+ + +  N
Sbjct: 21  NNEVYIADYGNHRIRKILENGN-IVTIAGNGTAGFSGDNGIATKAQLNGPVGV-FVSSNN 78

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            +Y+AD +NH +R+I   N  +  +AG GT G     G   T + LN P  V +   N +
Sbjct: 79  EVYIADYDNHRIRKI-LENGNIVIIAGKGTAGFSGDNG-LATKEKLNFPRCV-FVSSNNE 135

Query: 730 VYIAMAGQH---QIWEHSTVDGVT----RAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
           VYIA    H   +I E+  +  +       F GD      NG ++ N     P+G+ +S 
Sbjct: 136 VYIADQINHRIRKILENGNIVTIAGNGPYGFCGD------NGLAT-NAQLNSPAGVFVSS 188

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
           +  EIY+AD ++  IR + L+ G    +AG           F   +G+ ++  L  P  V
Sbjct: 189 N-NEIYIADYDNHRIRKI-LENGNIVTIAGKGTA------GFSGDNGLATKEKLNFPRCV 240

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIEA 900
           + + N ++Y+AD  NH+I+K+    N V T+AG G  GF   +G A  AQL+ PAG+  +
Sbjct: 241 FVSSNNEVYIADQINHRIRKILENGNIV-TIAGNGPYGFCGDNGLATNAQLNSPAGVFVS 299

Query: 901 QNGNLFIADTNNNIIR 916
            N  ++IA+  N+ IR
Sbjct: 300 SNNEIYIAEYGNHRIR 315



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 129/260 (49%), Gaps = 28/260 (10%)

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
           +  N +Y+AD  NH +R+I   N  + T+AGNGT G     G    +QL N P  V +  
Sbjct: 19  SSNNEVYIADYGNHRIRKI-LENGNIVTIAGNGTAGFSGDNGIATKAQL-NGPVGV-FVS 75

Query: 726 INEKVYIAMAGQH---QIWEHSTVDGV----TRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
            N +VYIA    H   +I E+  +  +    T  FSGD     L     LN     P  +
Sbjct: 76  SNNEVYIADYDNHRIRKILENGNIVIIAGKGTAGFSGD---NGLATKEKLNF----PRCV 128

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
            +S +  E+Y+AD  +  IR + L+ G    +AG  P      + F   +G+ +   L  
Sbjct: 129 FVSSN-NEVYIADQINHRIRKI-LENGNIVTIAGNGP------YGFCGDNGLATNAQLNS 180

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAG 896
           P GV+ + N +IY+AD  NH+I+K+    N V T+AG G AGF   +G A   +L+ P  
Sbjct: 181 PAGVFVSSNNEIYIADYDNHRIRKILENGNIV-TIAGKGTAGFSGDNGLATKEKLNFPRC 239

Query: 897 IIEAQNGNLFIADTNNNIIR 916
           +  + N  ++IAD  N+ IR
Sbjct: 240 VFVSSNNEVYIADQINHRIR 259



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 30/279 (10%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKN 669
           NN ++I+D +++RI     +GN IV I   G  G    +G       N P+   + +  N
Sbjct: 77  NNEVYIADYDNHRIRKILENGN-IVIIAGKGTAGFSGDNGLATKEKLNFPR-CVFVSSNN 134

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            +Y+AD  NH +R+I   N  + T+AGNG  G     G    +QL NSP  V +   N +
Sbjct: 135 EVYIADQINHRIRKI-LENGNIVTIAGNGPYGFCGDNGLATNAQL-NSPAGV-FVSSNNE 191

Query: 730 VYIAMAGQH---QIWEHSTVDGV----TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
           +YIA    H   +I E+  +  +    T  FSGD     L     LN     P  + +S 
Sbjct: 192 IYIADYDNHRIRKILENGNIVTIAGKGTAGFSGD---NGLATKEKLNF----PRCVFVSS 244

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
           +  E+Y+AD  +  IR + L+ G    +AG  P      + F   +G+ +   L  P GV
Sbjct: 245 N-NEVYIADQINHRIRKI-LENGNIVTIAGNGP------YGFCGDNGLATNAQLNSPAGV 296

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
           + + N +IY+A+  NH+I+K+    N V T+AG G AGF
Sbjct: 297 FVSSNNEIYIAEYGNHRIRKILENGNIV-TVAGNGTAGF 334



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 13/155 (8%)

Query: 766 SSLNTS--FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
           SSL TS     P  + +S +  E+Y+AD  +  IR + L+ G    +AG           
Sbjct: 2   SSLATSAQLYSPESVFVSSN-NEVYIADYGNHRIRKI-LENGNIVTIAGNGTA------G 53

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK- 882
           F   +G+ ++  L  P+GV+ + N ++Y+AD  NH+I+K+    N V  +AG G AGF  
Sbjct: 54  FSGDNGIATKAQLNGPVGVFVSSNNEVYIADYDNHRIRKILENGNIV-IIAGKGTAGFSG 112

Query: 883 -DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            +G A   +L+ P  +  + N  ++IAD  N+ IR
Sbjct: 113 DNGLATKEKLNFPRCVFVSSNNEVYIADQINHRIR 147


>gi|398830882|ref|ZP_10589063.1| cytochrome c biogenesis protein [Phyllobacterium sp. YR531]
 gi|398213462|gb|EJN00056.1| cytochrome c biogenesis protein [Phyllobacterium sp. YR531]
          Length = 424

 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 7/155 (4%)

Query: 418 ISDVENRKT---TPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHV 471
           ++ VE R T    P+   FP+    + WLN+ PL     LKGKVV++DFWTY CINC+H 
Sbjct: 257 VAVVEKRSTKSDLPVEGLFPSLDGAVQWLNSPPLT-TEQLKGKVVLVDFWTYSCINCIHT 315

Query: 472 LPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531
           +P +    +KYKD    VVGVH+ ++  EK++E ++ AV  + I +PV  D D  +WR  
Sbjct: 316 VPYVRAWAEKYKDQGLVVVGVHAPEYAFEKNIENVKKAVKDFQIGYPVAIDNDFKIWRAF 375

Query: 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566
             + WP    +   G++     GEG  +  + +++
Sbjct: 376 ENSYWPAHYFIDAKGQIRYHHFGEGDYEQSEKVIQ 410


>gi|290978674|ref|XP_002672060.1| predicted protein [Naegleria gruberi]
 gi|284085634|gb|EFC39316.1| predicted protein [Naegleria gruberi]
          Length = 1219

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 187/439 (42%), Gaps = 61/439 (13%)

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAV--VGPN 545
           T+ G   A FDN      I NA  +  ++HP  N   +N   E+ ++    + V  +   
Sbjct: 286 TIAGTGEAGFDN------ILNAT-QSKVNHP--NSVTLNELGEVFISDSQNYRVRKITTE 336

Query: 546 GKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGK 605
             ++  + G G  K   DL     LFY                    PR   S       
Sbjct: 337 SGIITTIVGNGFEKYCTDLASNTPLFY--------------------PRGIISNE----- 371

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD--DATFNRPQGLA 663
                 N   F +DS+ N  +   L    I+ I  +G +G      +   A  N P  +A
Sbjct: 372 ------NGEFFYADSS-NHCIRKILTNGTILTIAGTGTKGYNGDGIEATSAQLNTPHDVA 424

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVC 722
            N     +Y+ADTEN+ +R+I   N T+ T+AG G  G  Y G G       LN P  V 
Sbjct: 425 LNLATGEIYIADTENNRIRKI-LTNGTITTIAGTGDYG--YNGDGIMAVDAWLNEPSGVE 481

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               + +V+ +     +I   S   G+    +G G  +      + +T+ A P+ I   P
Sbjct: 482 IDSTSGEVFFSDTENFRIRRVSN-SGIITTIAGTGKSKFNGDGMATDTNLATPTEIQYVP 540

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
              EIY ADS ++ IR   +  G    +AG       +   +   +   +   L  P+GV
Sbjct: 541 STTEIYFADSGNNRIRKFTIN-GMMTTIAG------TSTSGYNGDNMPATRAWLNFPVGV 593

Query: 843 -YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG--AALAAQLSEPAGIIE 899
            Y  K  Q+Y+AD  NH+I+K+   +  ++T+AG GK G+      AL+ Q++ P G+I 
Sbjct: 594 TYDPKTNQVYIADLSNHRIRKI-LTNGTITTIAGTGKGGYNGNNLTALSTQVNGPHGMIL 652

Query: 900 AQNGNLFIADTNNNIIRYL 918
             NG++  +D+ NN+IR +
Sbjct: 653 QPNGDVIFSDSTNNVIRII 671



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 162/334 (48%), Gaps = 28/334 (8%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDA 654
           ++ L  P  + +D  +  ++I+DSN++RI     +G  I  I  +G  G    D S D A
Sbjct: 77  SAQLNNPVGIYVDTNSREVYIADSNNHRIRKILQNGK-ITTIAGTGIAGYNGDDKSADSA 135

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
             N P G+  +     ++++D++NH +R+I   N  + T+AG G  G +  G E   ++L
Sbjct: 136 QLNTPSGIVIDPNNGEIFISDSKNHRIRKI-LQNGKITTIAGTGEAGYNGDGIEAKFAKL 194

Query: 715 LNSPWDVCYKP-----INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL- 768
                   Y P       ++++IA    H+I + S   G+    +G+G     NG + L 
Sbjct: 195 --------YLPNGIDLYEKELFIADQNNHRIRKVSLDTGLISTIAGNG-NSGYNGDNILA 245

Query: 769 -NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
            N   + P+G+       E+Y+ADS +  IR + L++G    +AG      DN+      
Sbjct: 246 TNCKLSLPAGVRYDSKRREVYIADSNNQRIRKI-LESGIIVTIAGTGEAGFDNILN---- 300

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
               ++  + HP  V   + G+++++DS N++++K+   S  ++T+ G G   +    A 
Sbjct: 301 ---ATQSKVNHPNSVTLNELGEVFISDSQNYRVRKITTESGIITTIVGNGFEKYCTDLAS 357

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
              L  P GII  +NG  F AD++N+ IR +  N
Sbjct: 358 NTPLFYPRGIISNENGEFFYADSSNHCIRKILTN 391



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 170/336 (50%), Gaps = 32/336 (9%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           ++ L  P  + ID  N  +FISDS ++RI     +G  I  I  +GE G  +G   +A F
Sbjct: 134 SAQLNTPSGIVIDPNNGEIFISDSKNHRIRKILQNGK-ITTIAGTGEAGY-NGDGIEAKF 191

Query: 657 NR---PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTS 712
            +   P G+    K+  L++AD  NH +R++      + T+AGNG  G  Y G     T+
Sbjct: 192 AKLYLPNGIDLYEKE--LFIADQNNHRIRKVSLDTGLISTIAGNGNSG--YNGDNILATN 247

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQH---QIWEHSTVDGVTRAFSGD-GYERNLNGSSSL 768
             L+ P  V Y     +VYIA +      +I E   +  VT A +G+ G++  LN + S 
Sbjct: 248 CKLSLPAGVRYDSKRREVYIADSNNQRIRKILESGII--VTIAGTGEAGFDNILNATQS- 304

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
                 P+ ++L+ +  E++++DS++  +R +  ++G    + G       N F+    D
Sbjct: 305 --KVNHPNSVTLN-ELGEVFISDSQNYRVRKITTESGIITTIVG-------NGFEKYCTD 354

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AA 886
            + S   L +P G+   +NG+ + ADS NH I+K+   +  + T+AG G  G+  DG  A
Sbjct: 355 -LASNTPLFYPRGIISNENGEFFYADSSNHCIRKI-LTNGTILTIAGTGTKGYNGDGIEA 412

Query: 887 LAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLN 921
            +AQL+ P  + +    G ++IADT NN IR +  N
Sbjct: 413 TSAQLNTPHDVALNLATGEIYIADTENNRIRKILTN 448



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 35/288 (12%)

Query: 644 EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           +G+ DG         P   A+  ++  + +AD  NH +R++ F N T+ T+AGNG  G  
Sbjct: 13  QGICDGHLSTNAPVNPSDCAFLDEE--MLIADATNHRIRKV-FTNGTIVTIAGNGFAG-- 67

Query: 704 YQG-GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI------WEHSTVDGVTRA-FSG 755
           Y G G   TS  LN+P  +     + +VYIA +  H+I       + +T+ G   A ++G
Sbjct: 68  YNGDGLDATSAQLNNPVGIYVDTNSREVYIADSNNHRIRKILQNGKITTIAGTGIAGYNG 127

Query: 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GD 814
           D    +   S+ LNT    PSGI + P+  EI+++DS++  IR + L+ G    +AG G+
Sbjct: 128 DDKSAD---SAQLNT----PSGIVIDPNNGEIFISDSKNHRIRKI-LQNGKITTIAGTGE 179

Query: 815 PIFPDNLFKFGDRDGMGSEVL-LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
             +        + DG+ ++   L  P G+   +  ++++AD  NH+I+K+   +  +ST+
Sbjct: 180 AGY--------NGDGIEAKFAKLYLPNGIDLYEK-ELFIADQNNHRIRKVSLDTGLISTI 230

Query: 874 AGIGKAGFKDGAALA--AQLSEPAGI-IEAQNGNLFIADTNNNIIRYL 918
           AG G +G+     LA   +LS PAG+  +++   ++IAD+NN  IR +
Sbjct: 231 AGNGNSGYNGDNILATNCKLSLPAGVRYDSKRREVYIADSNNQRIRKI 278


>gi|431798812|ref|YP_007225716.1| gluconolactonase [Echinicola vietnamensis DSM 17526]
 gi|430789577|gb|AGA79706.1| gluconolactonase [Echinicola vietnamensis DSM 17526]
          Length = 428

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 24/289 (8%)

Query: 633 NFIVQ-IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691
           N++V  +  S + GL DGS   A F  P+G+  +    L+ V D  N+++R++   +  V
Sbjct: 107 NYVVSTLAGSSDYGLIDGSGIQAAFRNPEGVTMHPDGYLI-VTDRANNSIRKV-TTDGAV 164

Query: 692 RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD--GV 749
            T+ G G  G  +Q G    S LL+ PW  C   +   +Y+A    H I +   +D  G+
Sbjct: 165 STVLGTGNSG--FQNGPV-ASALLDYPWKSCVD-MEGNIYVADRDNHMIRK---IDPQGM 217

Query: 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
               +G G E       +    F QP  I+++ + + +YV D+ +  IR + +  G    
Sbjct: 218 VSTVAGTG-EAGFADGPAEEAQFDQPLDIAVTAEGV-LYVTDNRNHRIRKIEVD-GTVST 274

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR 869
           +AG +          G++DG   E   ++P G+     G IYVAD  NH I+K+D  + +
Sbjct: 275 VAGSEQ---------GNQDGALEEATFRYPSGLDVDDMGNIYVADRINHLIRKIDLNAGQ 325

Query: 870 VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           VST+AG G  G +DG  + AQ + P GI  A NG L +AD +N+ IR +
Sbjct: 326 VSTVAGDGSQGTRDGQVMTAQFNNPYGISVADNGQLVVADLSNHKIRLI 374



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 11/156 (7%)

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFG 825
           S +  +F  P G+++ PD   I V D  ++SIR +      S +L  G+  F        
Sbjct: 125 SGIQAAFRNPEGVTMHPDGYLI-VTDRANNSIRKVTTDGAVSTVLGTGNSGF-------- 175

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            ++G  +  LL +P        G IYVAD  NH I+K+DP    VST+AG G+AGF DG 
Sbjct: 176 -QNGPVASALLDYPWKSCVDMEGNIYVADRDNHMIRKIDP-QGMVSTVAGTGEAGFADGP 233

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           A  AQ  +P  I     G L++ D  N+ IR ++++
Sbjct: 234 AEEAQFDQPLDIAVTAEGVLYVTDNRNHRIRKIEVD 269



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 27/267 (10%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L +P K  +D+  N ++++D +++ I   D  G  +  +  +GE G  DG  ++A F++P
Sbjct: 185 LDYPWKSCVDMEGN-IYVADRDNHMIRKIDPQG-MVSTVAGTGEAGFADGPAEEAQFDQP 242

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNS 717
             +A  A+  +LYV D  NH +R+I+ V+ TV T+AG+       QG + G  +      
Sbjct: 243 LDIAVTAE-GVLYVTDNRNHRIRKIE-VDGTVSTVAGS------EQGNQDGALEEATFRY 294

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           P  +    +   +Y+A    H I +     G     +GDG +   +G   +   F  P G
Sbjct: 295 PSGLDVDDMG-NIYVADRINHLIRKIDLNAGQVSTVAGDGSQGTRDGQV-MTAQFNNPYG 352

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           IS++ D  ++ VAD  +  IR           L  G+ +        G  DG+G      
Sbjct: 353 ISVA-DNGQLVVADLSNHKIR-----------LIQGENVITIAGSVAGFLDGVGVTSQFY 400

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLD 864
           +P  V    +G IYVAD  NH+++K++
Sbjct: 401 NPTDV-TYHDGVIYVADLGNHRVRKIE 426



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 586 SLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEG 645
           S + + D  L  +  ++P  L +D + N ++++D  ++ I   DL+   +  +   G +G
Sbjct: 278 SEQGNQDGALEEATFRYPSGLDVDDMGN-IYVADRINHLIRKIDLNAGQVSTVAGDGSQG 336

Query: 646 LRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ 705
            RDG    A FN P G++  A    L VAD  NH +R I   N  V T+AG     + + 
Sbjct: 337 TRDGQVMTAQFNNPYGISV-ADNGQLVVADLSNHKIRLIQGEN--VITIAG---SVAGFL 390

Query: 706 GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI 740
            G   TSQ  N P DV Y   +  +Y+A  G H++
Sbjct: 391 DGVGVTSQFYN-PTDVTYH--DGVIYVADLGNHRV 422


>gi|332715673|ref|YP_004443139.1| putative cytochrome c biogenesis protein [Agrobacterium sp. H13-3]
 gi|325062358|gb|ADY66048.1| putative cytochrome c biogenesis protein [Agrobacterium sp. H13-3]
          Length = 583

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL  R  L+GKVV++DFWTY CINC+  +P +     KY+D    V+
Sbjct: 270 PSLDGAVEWLNSPPLT-REQLRGKVVLVDFWTYSCINCIRTIPYVRAWADKYRDQGLVVI 328

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 329 GVHAPEFAFEKKIDNVRQAVAGFKIDYPVAIDNDYKIWRAFDNSYWPAHYLIDAKGQIRY 388

Query: 551 QLAGEGHRKDLDDLVE 566
              GEG+ +  ++ ++
Sbjct: 389 HHFGEGNYRQTEEAIQ 404


>gi|420248283|ref|ZP_14751638.1| Peroxiredoxin [Burkholderia sp. BT03]
 gi|398068611|gb|EJL60022.1| Peroxiredoxin [Burkholderia sp. BT03]
          Length = 183

 Score =  114 bits (285), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  ++ L+GKVV++DFWTY CINC++ LP +E L +KYKD    VV
Sbjct: 42  PEFAGIDQWLNSPPLTMQQ-LRGKVVLVDFWTYTCINCVNTLPHVEKLYQKYKDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E++ + ++ A+  YG+ +PV  D     W   G   WP   ++   G ++ 
Sbjct: 101 GVHTPEYAFERETKKVKAAIAEYGLHYPVAQDNQYATWNAYGNQYWPAVYLIDKQGHIVY 160

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG      D  EAA+
Sbjct: 161 SHFGEGDY----DKTEAAV 175


>gi|206602867|gb|EDZ39348.1| Conserved protein of unknown function [Leptospirillum sp. Group II
           '5-way CG']
          Length = 374

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 25/288 (8%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           GS      RDG   +A FN P+G+A +     LY+AD+ N+ +R+ID    TV T+AG+ 
Sbjct: 98  GSDHRARYRDGVGANARFNNPEGMAISPDGKTLYIADSRNNMIRKIDLATKTVSTIAGHS 157

Query: 699 TKGS-DYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
              S D  G E G      +P  +   P  + +Y+A +G + I +           +G G
Sbjct: 158 FPSSGDGVGKEAG----FETPRGLAISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAG 213

Query: 758 YERNLNGSS---SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGD 814
             + ++GS+    +  +F +P  +++S D   +Y+AD+ ++ IR + L T     LA G 
Sbjct: 214 --KLMSGSADGVGVQATFHEPRSLAISGDGQVLYIADTRNNLIRKMVLATNSVSTLA-GH 270

Query: 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
           P FP  L      +G G +    HP+ V    N ++YVAD  N  I+ +D ++  VST+A
Sbjct: 271 PGFPGTL------NGPGPDAYFYHPVSVTIDGN-KLYVADGANADIRMVDLSTGVVSTVA 323

Query: 875 ------GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
                 G+  AG +DG+ +      P G +   +G LF+ADT  + IR
Sbjct: 324 GATLNGGVPIAGREDGSGVEGHFQFP-GALTVYHGVLFVADTPADTIR 370



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 145/292 (49%), Gaps = 27/292 (9%)

Query: 639 GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNG 698
           GS  E G  DG+  +A F  PQG+   A    +Y+ADT N  +R+++    +V  +AG+ 
Sbjct: 42  GSFHERGAIDGAGTNARFEFPQGI-LAAPDGTIYIADTGNDMIRKMNPSTKSVENVAGSD 100

Query: 699 TKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWE-------HSTVDGVTR 751
            + + Y+ G  G +   N+P  +   P  + +YIA +  + I +        ST+ G + 
Sbjct: 101 HR-ARYRDG-VGANARFNNPEGMAISPDGKTLYIADSRNNMIRKIDLATKTVSTIAGHSF 158

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLA 811
             SGDG  +           F  P G+++SPD   +YVADS +++IR ++L T     LA
Sbjct: 159 PSSGDGVGK--------EAGFETPRGLAISPDGKTLYVADSGNNAIRKIDLATNTVTTLA 210

Query: 812 GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASNRV 870
           G   +        G  DG+G +     P  +  + +GQ+ Y+AD+ N+ I+K+  A+N V
Sbjct: 211 GAGKLMS------GSADGVGVQATFHEPRSLAISGDGQVLYIADTRNNLIRKMVLATNSV 264

Query: 871 STLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           STLAG  G  G  +G    A    P  +    N  L++AD  N  IR +DL+
Sbjct: 265 STLAGHPGFPGTLNGPGPDAYFYHPVSVTIDGN-KLYVADGANADIRMVDLS 315



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 119/267 (44%), Gaps = 18/267 (6%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +AI      L+I+DS +N I   DL    +  I         DG   +A F  P+GL
Sbjct: 118 PEGMAISPDGKTLYIADSRNNMIRKIDLATKTVSTIAGHSFPSSGDGVGKEAGFETPRGL 177

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A +     LYVAD+ N+A+R+ID   +TV TLAG G   S    G  G     + P  + 
Sbjct: 178 AISPDGKTLYVADSGNNAIRKIDLATNTVTTLAGAGKLMSGSADG-VGVQATFHEPRSLA 236

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLS 781
                + +YIA    + I +           +G  G+   LNG    +  F  P  +S++
Sbjct: 237 ISGDGQVLYIADTRNNLIRKMVLATNSVSTLAGHPGFPGTLNGPGP-DAYFYHP--VSVT 293

Query: 782 PDFMEIYVADSESSSIRALNLKTG-----GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
            D  ++YVAD  ++ IR ++L TG         L GG PI        G  DG G E   
Sbjct: 294 IDGNKLYVADGANADIRMVDLSTGVVSTVAGATLNGGVPI-------AGREDGSGVEGHF 346

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKL 863
           Q P G     +G ++VAD+    I+++
Sbjct: 347 QFP-GALTVYHGVLFVADTPADTIREV 372



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)

Query: 715 LNSPWDVCYKPINEKVYIAMA-GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
           +N  W    K I+  +  ++  G     +  TV  +  +F    +ER     +  N  F 
Sbjct: 5   VNRKWKASAKMISLGLGASLVLGAGMQAQAVTVSTIAGSF----HERGAIDGAGTNARFE 60

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            P GI  +PD   IY+AD+ +  IR +N  T     +AG      D+  ++  RDG+G+ 
Sbjct: 61  FPQGILAAPD-GTIYIADTGNDMIRKMNPSTKSVENVAG-----SDHRARY--RDGVGAN 112

Query: 834 VLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
               +P G+  + +G+ +Y+ADS N+ I+K+D A+  VST+AG       DG    A   
Sbjct: 113 ARFNNPEGMAISPDGKTLYIADSRNNMIRKIDLATKTVSTIAGHSFPSSGDGVGKEAGFE 172

Query: 893 EPAGIIEAQNG-NLFIADTNNNIIRYLDL 920
            P G+  + +G  L++AD+ NN IR +DL
Sbjct: 173 TPRGLAISPDGKTLYVADSGNNAIRKIDL 201



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%)

Query: 870 VSTLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQ 928
           VST+AG   + G  DGA   A+   P GI+ A +G ++IADT N++IR     K  P  +
Sbjct: 37  VSTIAGSFHERGAIDGAGTNARFEFPQGILAAPDGTIYIADTGNDMIR-----KMNPSTK 91

Query: 929 TLE 931
           ++E
Sbjct: 92  SVE 94


>gi|418299720|ref|ZP_12911552.1| putative cytochrome c biogenesis protein [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355534873|gb|EHH04172.1| putative cytochrome c biogenesis protein [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 582

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL  R  L+GKV+++DFWTY CINC+  +P +     KY+D    V+
Sbjct: 269 PSLDGAVEWLNSPPLT-REQLRGKVILIDFWTYSCINCIRTIPYVRAWADKYRDQGLVVI 327

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 328 GVHAPEFAFEKKIDNVRQAVAGFKIDYPVAIDNDYRIWRAFDNSYWPAHYLIDARGQIRY 387

Query: 551 QLAGEGHRKDLDDLVE 566
              GEG+ +  ++ ++
Sbjct: 388 HHFGEGNYRQTEEAIQ 403


>gi|227818487|ref|YP_002822458.1| cytochrome biogenesis protein [Sinorhizobium fredii NGR234]
 gi|227337486|gb|ACP21705.1| putative cytochrome biogenesis protein [Sinorhizobium fredii
           NGR234]
          Length = 585

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           I P     ++WLN+ PL    +L+GKVV++DFWTY CINC+  +P +    +KY+D    
Sbjct: 270 IFPPLDGAVEWLNSKPLTVE-ELRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYRDQGLV 328

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVH+ +F  EK ++ +R AV  + I +PV  D D ++WR  G + WP    +   G++
Sbjct: 329 VIGVHAPEFAFEKRIDNVRKAVRDFEIGYPVAIDNDFSIWRAFGNSYWPAHYFIDAEGRI 388

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
             +  GEG     + +++  L
Sbjct: 389 RHRHFGEGDYDQSERVIQELL 409


>gi|390567977|ref|ZP_10248290.1| redoxin domain-containing protein [Burkholderia terrae BS001]
 gi|389940117|gb|EIN01933.1| redoxin domain-containing protein [Burkholderia terrae BS001]
          Length = 161

 Score =  114 bits (284), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  ++ L+GKVV++DFWTY CINC++ LP +E L +KYKD    VV
Sbjct: 20  PEFAGIDQWLNSPPLTMQQ-LRGKVVLVDFWTYTCINCVNTLPHVEKLYQKYKDQGLVVV 78

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E++ + ++ A+  YG+ +PV  D     W   G   WP   ++   G ++ 
Sbjct: 79  GVHTPEYAFERETKKVKAAIAEYGLHYPVAQDNQYATWNAYGNQYWPAVYLIDKQGHIVY 138

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG      D  EAA+
Sbjct: 139 SHFGEGDY----DKTEAAV 153


>gi|91779280|ref|YP_554488.1| putative transmembrane protein [Burkholderia xenovorans LB400]
 gi|91691940|gb|ABE35138.1| putative transmembrane protein [Burkholderia xenovorans LB400]
          Length = 622

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 1/152 (0%)

Query: 418 ISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
           +++V       ++P     + WLN+ PL  + DL+GKVV++DFWTY CINC+  LP ++ 
Sbjct: 292 VANVAPLPVEGVLPPLDGAVQWLNSPPLTLQ-DLRGKVVLIDFWTYSCINCLRSLPYVKA 350

Query: 478 LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
             +KYKD    V+GVH+ +F  E++++ ++ AV   G+ +PV  D +  +WR L    WP
Sbjct: 351 WAQKYKDQGLVVIGVHAPEFAFERNIDNVKKAVHDLGVDYPVAIDNNYAIWRALNNQYWP 410

Query: 538 TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
               V   G++     GEG   + + +++  L
Sbjct: 411 AHYFVDARGQIRYHHFGEGDYAESEKVIQQLL 442


>gi|387903891|ref|YP_006334229.1| thiol-disulfide isomerase/thioredoxin [Burkholderia sp. KJ006]
 gi|387578783|gb|AFJ87498.1| Thiol-disulfide isomerase/thioredoxin [Burkholderia sp. KJ006]
          Length = 196

 Score =  114 bits (284), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P F     W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PNFTGIERWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + +  A+ R+GI +PV  D   + WR  G   WP   ++  +GK++ 
Sbjct: 101 GVHTPEYPFERDADNVAEALERFGIRYPVAQDNHYDTWRAYGNQYWPALYLIDASGKVVY 160

Query: 551 QLAGEG 556
              GEG
Sbjct: 161 TRYGEG 166


>gi|406948931|gb|EKD79538.1| hypothetical protein ACD_41C00042G0003 [uncultured bacterium]
          Length = 554

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 6/179 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+     +WLN+ PL    +L+GKVV++DFWTY CINC+  LP ++   ++Y+D    V+
Sbjct: 267 PDIIGIANWLNSEPLTLD-ELRGKVVLIDFWTYTCINCIRTLPHVQGWYEQYQDDGLVVI 325

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F+ EKD   ++NA+  YG+++PV  D D   W+      WP   ++   G +  
Sbjct: 326 GVHSPEFEFEKDTGNVQNAIDMYGLTYPVAQDNDFATWKNYNNRYWPAKYLIDAKGNIRY 385

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAID 609
              GEG     ++ + A L   G     D   LP     D  P   T+P  + G   ID
Sbjct: 386 THFGEGEYDKTENAIRALLAEAGATVTNDMQDLP-----DETPVYATTPETYLGLGRID 439


>gi|107025469|ref|YP_622980.1| redoxin [Burkholderia cenocepacia AU 1054]
 gi|116693349|ref|YP_838882.1| redoxin domain-containing protein [Burkholderia cenocepacia HI2424]
 gi|105894843|gb|ABF78007.1| Redoxin [Burkholderia cenocepacia AU 1054]
 gi|116651349|gb|ABK11989.1| Redoxin domain protein [Burkholderia cenocepacia HI2424]
          Length = 193

 Score =  114 bits (284), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P F     W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VV
Sbjct: 42  PAFTGIDRWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D   + +A+ R+ I +PV  D   + WR  G   WP   ++  NGK++ 
Sbjct: 101 GVHTPEYPFERDAGNVADAIRRFDIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVY 160

Query: 551 QLAGEGHRKDLDDLVEAALLFYGK 574
              GEG     +  +  AL   G+
Sbjct: 161 TRYGEGGYDKTEAAIRGALTQAGE 184


>gi|91786445|ref|YP_547397.1| cytochrome c biogenesis protein transmembrane subunit [Polaromonas
           sp. JS666]
 gi|91695670|gb|ABE42499.1| cytochrome c biogenesis protein, transmembrane region [Polaromonas
           sp. JS666]
          Length = 435

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+ PL     L+GKVV++DFWT+ C+NC++ LP +    +KYKD    V
Sbjct: 287 MPPLSGAVEWLNSTPLT-AEALRGKVVLVDFWTFGCVNCLNALPHVREWHRKYKDQGLVV 345

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVHS +F  EK++  ++NAV R  IS PV  D +  +WR    N WP    V   G++ 
Sbjct: 346 VGVHSPEFAFEKNINNVKNAVNRLDISFPVAIDNNFAIWRAFSNNYWPAHYFVDAKGRIR 405

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 406 FHHFGEGEYEKSEQVIQQLL 425


>gi|440224320|ref|YP_007337716.1| redoxin domain-containing protein [Rhizobium tropici CIAT 899]
 gi|440043192|gb|AGB75170.1| redoxin domain-containing protein [Rhizobium tropici CIAT 899]
          Length = 590

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     + WLN+ PL     L+GKVV++DFWTY CINC+  +P +    +KY+D    V+
Sbjct: 277 PSLDGAVTWLNSEPLT-TAGLRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYRDQGLVVI 335

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F  EK+++ ++ A+  + I +PV  D D  +WR    N WP   ++   G++  
Sbjct: 336 GVHSPEFAFEKNIDNVKKAIADFKIGYPVAIDNDYRIWRAFENNYWPAHYLIDAKGQIRY 395

Query: 551 QLAGEGHRKDLDDLVE 566
           Q  GEG+ +  +  ++
Sbjct: 396 QHFGEGNYRQTEQAIQ 411


>gi|115359361|ref|YP_776499.1| redoxin domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115284649|gb|ABI90165.1| Redoxin domain protein [Burkholderia ambifaria AMMD]
          Length = 197

 Score =  113 bits (283), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           TP  P+F     W N+ PL+  + L+GKVV++DFWTY CINC+H +P +    +KY+D  
Sbjct: 39  TP-APDFTGIERWQNSPPLKLAQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQG 96

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             VVGVH+ ++  E+D + + +A+ R+ I +PV  D   + WR  G   WP   ++  NG
Sbjct: 97  LVVVGVHTPEYPFERDPKNVADALKRFDIQYPVAQDNRYDTWRAYGNQYWPALYLIDANG 156

Query: 547 KLLAQLAGEGHRKDLDDLVEAALL 570
           K++    GEG     +  +  AL+
Sbjct: 157 KIVYTRYGEGGYDKTEAAIREALV 180


>gi|134292233|ref|YP_001115969.1| redoxin domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134135390|gb|ABO56504.1| Redoxin domain protein [Burkholderia vietnamiensis G4]
          Length = 196

 Score =  113 bits (283), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P F     W N+APL   + L+GKVV++DFWTY CINC+H +P +    ++Y+D    VV
Sbjct: 42  PNFTGIERWHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRRYRDQGLVVV 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D + + +A+ R+GI +PV  D   + WR  G   WP   ++  +GK++ 
Sbjct: 101 GVHTPEYPFERDADNVADALERFGIRYPVAQDNHYDTWRAYGNQYWPALYLIDASGKVVY 160

Query: 551 QLAGEG 556
              GEG
Sbjct: 161 TRYGEG 166


>gi|399003016|ref|ZP_10705688.1| cytochrome c biogenesis protein [Pseudomonas sp. GM18]
 gi|398123574|gb|EJM13121.1| cytochrome c biogenesis protein [Pseudomonas sp. GM18]
          Length = 602

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 1/151 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY+D    V
Sbjct: 287 LPSLDGAVQWLNSPPLT-AQALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLVV 345

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  + NA+   GI++PV  D D  +WR      WP        G++ 
Sbjct: 346 IGVHAPEFAFERDVGNVTNAMKDLGITYPVAIDNDYKIWRAFNNQYWPAHYFADAQGRIR 405

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
               GEG+  + + +++  L   G  K+ D 
Sbjct: 406 YHHFGEGNYAESERVIQQLLREAGAAKVADG 436


>gi|206564293|ref|YP_002235056.1| putative redoxin protein [Burkholderia cenocepacia J2315]
 gi|421865066|ref|ZP_16296750.1| Thiol-disulfide isomerase and thioredoxins [Burkholderia
           cenocepacia H111]
 gi|444364093|ref|ZP_21164436.1| redoxin [Burkholderia cenocepacia BC7]
 gi|444372081|ref|ZP_21171579.1| redoxin [Burkholderia cenocepacia K56-2Valvano]
 gi|198040333|emb|CAR56318.1| putative redoxin protein [Burkholderia cenocepacia J2315]
 gi|358074952|emb|CCE47628.1| Thiol-disulfide isomerase and thioredoxins [Burkholderia
           cenocepacia H111]
 gi|443593542|gb|ELT62274.1| redoxin [Burkholderia cenocepacia BC7]
 gi|443594174|gb|ELT62845.1| redoxin [Burkholderia cenocepacia K56-2Valvano]
          Length = 193

 Score =  113 bits (283), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    VVGVH+ ++ 
Sbjct: 50  WHNSAPLTLDQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVVGVHTPEYP 108

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            E+D + + +A+ R+ I +PV  D   + WR  G   WP   ++  NGK++    GEG  
Sbjct: 109 FERDAKNVADAIRRFDIRYPVAQDNRYDTWRAYGNQYWPALYLIDANGKIVYTRYGEGGY 168

Query: 559 KDLDDLVEAAL 569
              +  +  AL
Sbjct: 169 DKTEAAIRGAL 179


>gi|187919313|ref|YP_001888344.1| redoxin domain-containing protein [Burkholderia phytofirmans PsJN]
 gi|187717751|gb|ACD18974.1| Redoxin domain protein [Burkholderia phytofirmans PsJN]
          Length = 188

 Score =  113 bits (282), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 426 TTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM 485
           T    P+F     WLN+ PL  ++ L+GKVV++DFWTY C NC++ LP ++   +KYKD 
Sbjct: 42  TNAAAPDFTGISQWLNSDPLTLQQ-LRGKVVLVDFWTYTCGNCINTLPYVKSWNQKYKDQ 100

Query: 486 PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPN 545
             TV+GVH+ ++  E+D + ++ A+ R+GI++PV  D     W       WP F ++   
Sbjct: 101 GLTVIGVHTPEYPFERDTDNVKTAIKRFGITYPVAQDNRYATWNAYNNQYWPAFYLLDKQ 160

Query: 546 GKLLAQLAGEGHRKDLDDLVEAAL 569
           G+++    GEG     +  ++A L
Sbjct: 161 GRIVYTHFGEGDYAKTEAKIQALL 184


>gi|421605163|ref|ZP_16047100.1| hypothetical protein BCCGELA001_40297 [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404262728|gb|EJZ28471.1| hypothetical protein BCCGELA001_40297 [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 187

 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F    +W N+ PL    DL+GKVV++DFWTY C+NC++ LP +  L  KYKD    VV
Sbjct: 46  PDFTGINNWFNSKPLSMA-DLRGKVVLVDFWTYGCVNCVNTLPHVTELYAKYKDRGLVVV 104

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    ++ A+ R+GI++PV  D +   W       WP   +V   GK++ 
Sbjct: 105 GVHTPEFPFERSASNVQAALKRHGITYPVAQDNESKTWNAYRNRYWPAQYIVDQTGKIVF 164

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q  GEG    +D  V   L
Sbjct: 165 QHEGEGSYDQIDRTVARLL 183


>gi|209515663|ref|ZP_03264527.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           sp. H160]
 gi|209503899|gb|EEA03891.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           sp. H160]
          Length = 574

 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 421 VENRKTTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
           V+   T P+  + PA      WLN+ PL   + L+GKVV++DFWTY CINC+  LP +  
Sbjct: 247 VKAGDTLPVEGDLPALDGATQWLNSPPLT-AQSLRGKVVLVDFWTYSCINCIRSLPYVRG 305

Query: 478 LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
              KYKD    V+GVH+ +F  EKD   + +AV   G+++PV  D    +W+      WP
Sbjct: 306 WADKYKDYGLVVIGVHAPEFAFEKDPGNVAHAVKDLGVNYPVAIDNGYTIWKAFSNEYWP 365

Query: 538 TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               + P G +     GEG  K  +D++   L   G+K L D    P++
Sbjct: 366 AHYFIDPQGHIRHHHFGEGDYKQSEDVIRRLLAEAGQKDLPDGYVQPIA 414


>gi|404401017|ref|ZP_10992601.1| Redoxin domain-containing protein [Pseudomonas fuscovaginae
           UPB0736]
          Length = 601

 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P+    + WLN+APL    +LKGKVV++DFWTY CINC+  LP +    +KY D    V
Sbjct: 286 LPDLSGAVQWLNSAPLN-AAELKGKVVLIDFWTYSCINCLRSLPYVNAWAQKYHDQGLVV 344

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +R AV + GI +PV  D +  +WR      WP    +   G++ 
Sbjct: 345 IGVHAPEFAFERDIGNVRQAVSKLGIQYPVAIDNNYAIWRGFNNQYWPAHYFIDAQGRVR 404

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 405 YHHFGEGDYAGSERVIQQLL 424


>gi|390577136|ref|ZP_10257170.1| redoxin domain-containing protein [Burkholderia terrae BS001]
 gi|389930895|gb|EIM92989.1| redoxin domain-containing protein [Burkholderia terrae BS001]
          Length = 614

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     LKGKVV++DFWTY CINC+  LP ++   +KY+DM   V
Sbjct: 297 LPSLTGAVQWLNSPPLT-NAQLKGKVVLVDFWTYSCINCLRTLPYVKAWSQKYRDMGLVV 355

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E++++ ++ A    G+ +PV  D +  +WR  G   WP    V   G++ 
Sbjct: 356 IGVHAPEFAFERNIDNVKKATHDLGVDYPVAIDNNYAIWRAFGNQYWPAHYFVDAQGRVR 415

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGK 574
               GEG  +  + +++  L+  G 
Sbjct: 416 HHHFGEGEYEQSEKVIQQLLVEAGH 440


>gi|420254416|ref|ZP_14757421.1| cytochrome c biogenesis protein [Burkholderia sp. BT03]
 gi|398049134|gb|EJL41573.1| cytochrome c biogenesis protein [Burkholderia sp. BT03]
          Length = 614

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     LKGKVV++DFWTY CINC+  LP ++   +KY+DM   V
Sbjct: 297 LPSLTGAVQWLNSPPLT-NAQLKGKVVLVDFWTYSCINCLRTLPYVKAWSQKYRDMGLVV 355

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E++++ ++ A    G+ +PV  D +  +WR  G   WP    V   G++ 
Sbjct: 356 IGVHAPEFAFERNIDNVKKATHDLGVDYPVAIDNNYAIWRAFGNQYWPAHYFVDAQGRVR 415

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKK 576
               GEG  +  + +++  L+  G  +
Sbjct: 416 HHHFGEGEYEQSEKVIQQLLVEAGHPE 442


>gi|418410922|ref|ZP_12984225.1| putative cytochrome c biogenesis protein [Agrobacterium tumefaciens
           5A]
 gi|358002818|gb|EHJ95156.1| putative cytochrome c biogenesis protein [Agrobacterium tumefaciens
           5A]
          Length = 583

 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL  R  L+GKVV++DFWTY CINC+  +P +     KY+D    V+
Sbjct: 270 PSLDGAVEWLNSPPLT-REQLRGKVVLVDFWTYSCINCIRTIPYVRAWANKYRDQGLVVI 328

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 329 GVHAPEFAFEKKIDNVRQAVAGFKIDYPVAIDNDYKIWRAFDNSYWPAHYLIDAKGQIRY 388

Query: 551 QLAGEGHRKDLDDLVE 566
              GEG+ +  +  ++
Sbjct: 389 HHFGEGNYRQTEVAIQ 404


>gi|414176443|ref|ZP_11430672.1| hypothetical protein HMPREF9695_04318 [Afipia broomeae ATCC 49717]
 gi|410886596|gb|EKS34408.1| hypothetical protein HMPREF9695_04318 [Afipia broomeae ATCC 49717]
          Length = 185

 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           V+  + T   PEF    +W N+ PL     L+GKVV+++FWTY C+NC++ LP +  L  
Sbjct: 34  VQVAEATTTAPEFTGLGNWFNSQPLTLA-SLRGKVVLVNFWTYGCVNCVNTLPHVTQLYS 92

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           KYKD  F +VG+H+ +F  E     ++ A+ R+GI++PV  D     W       WP   
Sbjct: 93  KYKDKGFVIVGIHTPEFPFEHSSNNVQAALKRHGITYPVAQDNKSATWNAYRNQYWPAQY 152

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLV 565
           +V  +G+++   AGEG   ++D  V
Sbjct: 153 IVDQSGRIVYSHAGEGAYDEIDRTV 177


>gi|428179990|gb|EKX48859.1| hypothetical protein GUITHDRAFT_105483 [Guillardia theta CCMP2712]
          Length = 388

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 157/345 (45%), Gaps = 45/345 (13%)

Query: 615 LFISDSNHNRIVVTD-----------------LDGNFIVQ----IGSSGEEGLRDGSFDD 653
           ++ISD   N+I V D                 + GN +V     +  +GE G +DG    
Sbjct: 21  IYISDEKGNKIYVLDRFTGTVMILFTMSSNTTVKGNDVVSQVTLLAGTGEAGYKDGIGSS 80

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN----DTVRTLAGNGTKGSDYQGGEK 709
           A F  P GLA  + +  L V+D  NHA+R I   +      V T+AG+   G+ +  GE 
Sbjct: 81  AKFKSPSGLAVQSLRTGLCVSDRGNHAIRIITRESPDKPAVVDTVAGSDDSGAGFADGE- 139

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWE---HSTVDGVTRAFSGDGYERNL---- 762
           G + L N P  +   P    + +A +G H+I +         +    +G    RN+    
Sbjct: 140 GPNALFNHPEGLAMSPDGSFILVADSGNHRIRKVLLSKEDKNLVSTIAGGNQNRNVTYSQ 199

Query: 763 ---NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
              +  + +N+SF +P+ ++  P+  E+ V D+ + +IR L L TG    +AG      D
Sbjct: 200 GFNDADNGVNSSFNRPTDVAFLPNGEEVLVVDAGNHAIRKLTLSTGAVTTIAGNGNSGSD 259

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASNRVSTLAGIGK 878
           N        G G+    + P+ +  +  G+  ++A+    +I++L  ++ +V+TLAG G 
Sbjct: 260 N--------GFGTNATFEFPMSIVISAGGKYAFIAEMEGQRIRQLHLSTGQVTTLAGTGD 311

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           AG  DG  L A  + P  +    +  L + D  N+ IR + + ++
Sbjct: 312 AGSSDGTFLKASFNMPCSLNVIDSRRLMVLDYENSAIRVIAVQED 356



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 38/300 (12%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR---TLAGNGT-KGSDY----- 704
           A FNR + +        +Y++D + + +  +D    TV    T++ N T KG+D      
Sbjct: 4   AVFNRAKAIEGTGVGPNIYISDEKGNKIYVLDRFTGTVMILFTMSSNTTVKGNDVVSQVT 63

Query: 705 ------QGGEK---GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW--------EHSTVD 747
                 + G K   G+S    SP  +  + +   + ++  G H I         + + VD
Sbjct: 64  LLAGTGEAGYKDGIGSSAKFKSPSGLAVQSLRTGLCVSDRGNHAIRIITRESPDKPAVVD 123

Query: 748 GVTRA-FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
            V  +  SG G+          N  F  P G+++SPD   I VADS +  IR + L    
Sbjct: 124 TVAGSDDSGAGFAD----GEGPNALFNHPEGLAMSPDGSFILVADSGNHRIRKVLLSKED 179

Query: 807 SRL---LAGGDPIFPDNLFK-FGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADSYNHKIK 861
             L   +AGG+        + F D D  G       P  V    NG ++ V D+ NH I+
Sbjct: 180 KNLVSTIAGGNQNRNVTYSQGFNDADN-GVNSSFNRPTDVAFLPNGEEVLVVDAGNHAIR 238

Query: 862 KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL-FIADTNNNIIRYLDL 920
           KL  ++  V+T+AG G +G  +G    A    P  I+ +  G   FIA+     IR L L
Sbjct: 239 KLTLSTGAVTTIAGNGNSGSDNGFGTNATFEFPMSIVISAGGKYAFIAEMEGQRIRQLHL 298



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 18/216 (8%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRI---VVTDLDGNFIVQI--GSSGEEGLRDGSFDDA 654
              P  LA+    + + ++DS ++RI   +++  D N +  I  G+          F+DA
Sbjct: 145 FNHPEGLAMSPDGSFILVADSGNHRIRKVLLSKEDKNLVSTIAGGNQNRNVTYSQGFNDA 204

Query: 655 ------TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
                 +FNRP  +A+      + V D  NHA+R++      V T+AGNG  GSD   G 
Sbjct: 205 DNGVNSSFNRPTDVAFLPNGEEVLVVDAGNHAIRKLTLSTGAVTTIAGNGNSGSDNGFGT 264

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIA-MAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767
             T +    P  +      +  +IA M GQ     H +   VT   +G G   + +G + 
Sbjct: 265 NATFEF---PMSIVISAGGKYAFIAEMEGQRIRQLHLSTGQVT-TLAGTGDAGSSDG-TF 319

Query: 768 LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
           L  SF  P  +++  D   + V D E+S+IR + ++
Sbjct: 320 LKASFNMPCSLNV-IDSRRLMVLDYENSAIRVIAVQ 354



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 26/182 (14%)

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLL---------AGGDPIFPDNLF----K 823
           G  + P+   IY++D + + I  L+  TG   +L          G D +    L     +
Sbjct: 14  GTGVGPN---IYISDEKGNKIYVLDRFTGTVMILFTMSSNTTVKGNDVVSQVTLLAGTGE 70

Query: 824 FGDRDGMGSEVLLQHP--LGVYCAKNGQIYVADSYNHKIKKLDPAS----NRVSTLAGI- 876
            G +DG+GS    + P  L V   + G + V+D  NH I+ +   S      V T+AG  
Sbjct: 71  AGYKDGIGSSAKFKSPSGLAVQSLRTG-LCVSDRGNHAIRIITRESPDKPAVVDTVAGSD 129

Query: 877 -GKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKG 934
              AGF DG    A  + P G+  + +G+ + +AD+ N+ IR + L+KE+  L +    G
Sbjct: 130 DSGAGFADGEGPNALFNHPEGLAMSPDGSFILVADSGNHRIRKVLLSKEDKNLVSTIAGG 189

Query: 935 VQ 936
            Q
Sbjct: 190 NQ 191


>gi|239820816|ref|YP_002948001.1| Redoxin domain protein [Variovorax paradoxus S110]
 gi|239805669|gb|ACS22735.1| Redoxin domain protein [Variovorax paradoxus S110]
          Length = 187

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL+ + DL+GKVV++DFWTY CINC++ LP ++   +KYKD    VV
Sbjct: 41  PEFQNIDQWLNSPPLKLQ-DLRGKVVLVDFWTYTCINCLNHLPYVQAWNEKYKDKGLVVV 99

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK    +++A+ R  I H V  D     W+      WP   ++   GK++ 
Sbjct: 100 GVHTPEFAYEKSTRNVQDAISRLQIKHAVAQDNHYATWKAFNNQYWPAVYLIDKQGKIVY 159

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  +++ L
Sbjct: 160 SHFGEGSYATTEKKIQSLL 178


>gi|407464770|ref|YP_006775652.1| redoxin domain-containing protein [Candidatus Nitrosopumilus sp.
           AR2]
 gi|407047958|gb|AFS82710.1| redoxin domain-containing protein [Candidatus Nitrosopumilus sp.
           AR2]
          Length = 369

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 1/163 (0%)

Query: 407 QSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCI 466
           +S  + + V+ +S+++  K     P+     ++LNT P +   ++KGKVV+ D WTY CI
Sbjct: 34  ESNTVFEDVSSLSNIDKSKFKK-APKLVGIANYLNTTPEKLSEEIKGKVVLYDIWTYSCI 92

Query: 467 NCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMN 526
           NC+  LP +     KY D    +VG+HS +F+ EK+ + +R AV +YGI +PVV D DM 
Sbjct: 93  NCVRTLPYITAWNDKYSDQGLLIVGIHSPEFEFEKNPDNVRMAVEKYGIDYPVVMDNDMK 152

Query: 527 LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            W+      WP   +    G L     GEG  ++ + +++  L
Sbjct: 153 TWKAFENRYWPRKYIADHEGFLRYDHIGEGGYQETEKIIQQLL 195


>gi|402814801|ref|ZP_10864394.1| copper amine oxidase domain protein [Paenibacillus alvei DSM 29]
 gi|402507172|gb|EJW17694.1| copper amine oxidase domain protein [Paenibacillus alvei DSM 29]
          Length = 571

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 163/342 (47%), Gaps = 36/342 (10%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L+FP  +A    N  + ++D+ ++ +   D +G     IG   ++G  DG      F++P
Sbjct: 86  LQFPTGIAAG-ENQSIIVTDTRNHVLRRLDAEGRITATIGMINKQGWEDGEQAQVQFDQP 144

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
            GLA + K N LYVAD  NH +R+ID     V T+AG+G  G  ++ G  GT++  ++P 
Sbjct: 145 TGLAADKKGN-LYVADAGNHVIRKIDGAGK-VTTVAGDGIPG--WKDGAAGTAR-FHTPR 199

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR--------------AFSGDGYERNLNGS 765
            +     +  +Y+  +  H I     +  VT               + +G G  ++ N +
Sbjct: 200 AIAVAD-DGAIYVTDSLNHVIRRIDAMGMVTTLTARSSRIVEYSPGSVTGAGDFKDGNLT 258

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGD-------PIFP 818
            ++   F +PSGI+L  D  ++ VAD+ +  IR ++LK G    +AG         P   
Sbjct: 259 EAM---FNEPSGIALMND-GKLAVADTGNQRIRLIDLKQGSVSTIAGSSSTAGYTLPGVQ 314

Query: 819 DNLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-I 876
             L+  G  RDG  S  +   P G+       I VAD +NH ++ +      V TL+G  
Sbjct: 315 RVLYAPGGYRDGAASNSIFNSPTGIAITNENGIVVADRWNHVVRYI--YKGEVVTLSGQA 372

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           GK+G  DG    A+L EP  +    NG++ +A+  NN IR +
Sbjct: 373 GKSGDLDGITSYAKLHEPTAVAVLANGSIAVAEGFNNAIRLI 414



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 17/190 (8%)

Query: 737 QHQIWEHST---VDGVTRAFSGDGYER-NLNGSSSLNTSFAQ---PSGISLSPDFMEIYV 789
           Q Q +EH T   ++      +   YE  +L+G +  N    +   P+GI+   +   I V
Sbjct: 44  QAQAFEHFTSPAIEMTAWKAASHWYETVHLSGKAMANKQVERLQFPTGIAAGEN-QSIIV 102

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
            D+ +  +R L+ +    R+ A         + K G  DG  ++V    P G+   K G 
Sbjct: 103 TDTRNHVLRRLDAE---GRITA-----TIGMINKQGWEDGEQAQVQFDQPTGLAADKKGN 154

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           +YVAD+ NH I+K+D A  +V+T+AG G  G+KDGAA  A+   P  I  A +G +++ D
Sbjct: 155 LYVADAGNHVIRKIDGA-GKVTTVAGDGIPGWKDGAAGTARFHTPRAIAVADDGAIYVTD 213

Query: 910 TNNNIIRYLD 919
           + N++IR +D
Sbjct: 214 SLNHVIRRID 223



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 24/164 (14%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F QP+G++       +YVAD+ +  IR ++    G      GD I P      G +DG  
Sbjct: 141 FDQPTGLAADKK-GNLYVADAGNHVIRKID--GAGKVTTVAGDGI-P------GWKDGAA 190

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-------------IGK 878
                  P  +  A +G IYV DS NH I+++D A   V+TL                G 
Sbjct: 191 GTARFHTPRAIAVADDGAIYVTDSLNHVIRRID-AMGMVTTLTARSSRIVEYSPGSVTGA 249

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
             FKDG    A  +EP+GI    +G L +ADT N  IR +DL +
Sbjct: 250 GDFKDGNLTEAMFNEPSGIALMNDGKLAVADTGNQRIRLIDLKQ 293


>gi|254421030|ref|ZP_05034754.1| Redoxin family [Brevundimonas sp. BAL3]
 gi|196187207|gb|EDX82183.1| Redoxin family [Brevundimonas sp. BAL3]
          Length = 576

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 1/151 (0%)

Query: 419 SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFL 478
           +D+ N      +P       W+N+ PL   + L+GKVVV+DFWTY CINC+  LP +   
Sbjct: 251 TDLANLPVEGNIPPLTGATTWINSPPLT-PQQLRGKVVVVDFWTYSCINCLRALPYVRAW 309

Query: 479 EKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPT 538
            +KYKD    V+GVH+ +F  EK    +R+AV R G+ +PV  D D  +WR      WP 
Sbjct: 310 AEKYKDQGLVVIGVHTPEFAFEKSEANVRDAVRRLGVDYPVAMDNDFAIWRAFKNQYWPA 369

Query: 539 FAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
              +   G++     GEG  +  + +++  L
Sbjct: 370 HYFIDAQGRIRHHHFGEGDYEGSERVIQQLL 400


>gi|320106796|ref|YP_004182386.1| alkyl hydroperoxide reductase [Terriglobus saanensis SP1PR4]
 gi|319925317|gb|ADV82392.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Terriglobus saanensis SP1PR4]
          Length = 576

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 5/144 (3%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           ++P       W+N+ PL     L+GKVV++DFWTY CINC+  LP L+   +KYKD    
Sbjct: 260 MLPSLSGATAWINSPPLT-PESLRGKVVLVDFWTYSCINCLRTLPYLKAWNEKYKDSGLI 318

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           ++GVH+ +F  EKD   +R AV   G+++PVV D D ++WR      WP    +   GK+
Sbjct: 319 ILGVHTPEFPFEKDESNVRKAVHDLGVTYPVVMDNDYSIWRNFHNEYWPAHYFIDATGKI 378

Query: 549 LAQLAGEGH----RKDLDDLVEAA 568
                GEG+     K + +L+E A
Sbjct: 379 RFHHFGEGNYDESEKWIRELLEEA 402


>gi|374606289|ref|ZP_09679172.1| copper amine oxidase domain-containing protein [Paenibacillus
           dendritiformis C454]
 gi|374388103|gb|EHQ59542.1| copper amine oxidase domain-containing protein [Paenibacillus
           dendritiformis C454]
          Length = 564

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 163/364 (44%), Gaps = 57/364 (15%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIV---QIGSSGEEGLRD 648
           D R   +  ++P  L +   N  L I+D+ ++ I   D  G       Q+  + E    +
Sbjct: 67  DGRAEQAQFRYPAGL-LAGKNGALLIADTYNHLIRRADAAGQVSTLAGQVRFAAETREPN 125

Query: 649 GSFDD-----ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           GS+ D     A FN P G+A + + NL Y+AD  NH +R++D  +  V T+AG+G  G  
Sbjct: 126 GSWADGKGTEARFNEPMGMAEDRQGNL-YIADAANHVIRKLD-KSGRVTTVAGSGLAG-- 181

Query: 704 YQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN 763
           ++ G KG     N P DV     +  +Y+A A  H          V R    +G    LN
Sbjct: 182 WKDG-KGAEARFNEPRDVAVAE-DGSLYVADALNH----------VIRRIDANGNVTTLN 229

Query: 764 GSSS---------------------LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
             S                      + + F +PS ++ +P   ++ V+D+ +  +R ++L
Sbjct: 230 ARSKRIVEYAPGAVTAAGDYADGKLMVSKFNEPSSLAFTPS-GDLVVSDTGNQRLRLVDL 288

Query: 803 KTGGSRLLAGGDPI------FPDN-LFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
           K      LAG   +      FPD  L+  G  RDG  SE L   P G+     G I VAD
Sbjct: 289 KQKRVTTLAGAGSVASYSYKFPDTRLYAAGGYRDGKASEALFNGPAGIALTGEGGIVVAD 348

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
            +NH I+ L     +V TL+G G+ G ++G A  A   EP  +    NG + +AD  NN 
Sbjct: 349 RWNHAIRYL--YDGKVYTLSGGGRTGHQNGWAEQATFREPMDVAVLSNGTIAVADGFNNS 406

Query: 915 IRYL 918
           IR +
Sbjct: 407 IRLI 410



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 1/94 (1%)

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
           DG G+E     P+G+   + G +Y+AD+ NH I+KLD  S RV+T+AG G AG+KDG   
Sbjct: 130 DGKGTEARFNEPMGMAEDRQGNLYIADAANHVIRKLD-KSGRVTTVAGSGLAGWKDGKGA 188

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            A+ +EP  +  A++G+L++AD  N++IR +D N
Sbjct: 189 EARFNEPRDVAVAEDGSLYVADALNHVIRRIDAN 222



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 81/304 (26%)

Query: 636 VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA 695
           +    SG  G  DG  + A F  P GL    K   L +ADT NH +R  D          
Sbjct: 55  IDWAGSGVSGSADGRAEQAQFRYPAGL-LAGKNGALLIADTYNHLIRRAD---------- 103

Query: 696 GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG 755
                                                  AGQ      ST+ G  R F+ 
Sbjct: 104 --------------------------------------AAGQV-----STLAGQVR-FAA 119

Query: 756 DGYERNLNGSSSLNTS--FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG 813
           +  E N + +    T   F +P G++       +Y+AD+ +  IR L+ K+G    +AG 
Sbjct: 120 ETREPNGSWADGKGTEARFNEPMGMAEDRQ-GNLYIADAANHVIRKLD-KSGRVTTVAGS 177

Query: 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
                      G +DG G+E     P  V  A++G +YVAD+ NH I+++D A+  V+TL
Sbjct: 178 GLA--------GWKDGKGAEARFNEPRDVAVAEDGSLYVADALNHVIRRID-ANGNVTTL 228

Query: 874 ------------AGIGKAG-FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
                         +  AG + DG  + ++ +EP+ +    +G+L ++DT N  +R +DL
Sbjct: 229 NARSKRIVEYAPGAVTAAGDYADGKLMVSKFNEPSSLAFTPSGDLVVSDTGNQRLRLVDL 288

Query: 921 NKEE 924
            ++ 
Sbjct: 289 KQKR 292


>gi|290972390|ref|XP_002668936.1| predicted protein [Naegleria gruberi]
 gi|284082474|gb|EFC36192.1| predicted protein [Naegleria gruberi]
          Length = 727

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 166/329 (50%), Gaps = 40/329 (12%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  + +   N+ ++I+D+  N  V   L+   IV I  +G++G          ++   GL
Sbjct: 10  PRSIFVSSSNDEVYIADTG-NHTVRKILENGNIVTIAGNGQQG----------YSGDNGL 58

Query: 663 AYNAK-----------KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
           A NA+           KN +Y+AD +N+ +R+I   N  + T+AGNG +G +   G    
Sbjct: 59  AVNAQLVSPSYVFVSSKNEVYIADYQNNRIRKI-LENGNIITIAGNGQQGYNGDNGLAVN 117

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS--SLN 769
           +QL  SP  VC    NE VYIA +G H I +    +G     +G+G ++  NG +  ++N
Sbjct: 118 AQLA-SPSSVCVSLKNE-VYIADSGNHSIRK-ILENGNIVTIAGNG-QQGYNGDNGPAVN 173

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
                PS + ++P+  E+Y+AD+ +  IR + L+ G    +AG           +   +G
Sbjct: 174 APLFDPSSVFVTPN-DEVYIADTGNHRIRKI-LRNGNIITIAGNGQQ------GYSGDNG 225

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAAL 887
                 L  P+ V+ +   ++Y+AD  N +I+K+    N + T+AG GK G+   +G A+
Sbjct: 226 PAVNAKLSSPVDVFVSSKNEVYIADYQNTRIRKILENGN-IITIAGNGKLGYGGDNGLAV 284

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            A+L  P G+  +Q+  ++IAD  NN IR
Sbjct: 285 NAKLYSPVGVFVSQDNEVYIADYQNNRIR 313



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 39/288 (13%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK----- 667
           N ++I+D  +NRI     +GN I+ I  +G++G          +N   GLA NA+     
Sbjct: 76  NEVYIADYQNNRIRKILENGN-IITIAGNGQQG----------YNGDNGLAVNAQLASPS 124

Query: 668 ------KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDV 721
                 KN +Y+AD+ NH++R+I   N  + T+AGNG +G +   G    + L + P  V
Sbjct: 125 SVCVSLKNEVYIADSGNHSIRKI-LENGNIVTIAGNGQQGYNGDNGPAVNAPLFD-PSSV 182

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS--SLNTSFAQPSGIS 779
              P N++VYIA  G H+I +    +G     +G+G ++  +G +  ++N   + P  + 
Sbjct: 183 FVTP-NDEVYIADTGNHRIRK-ILRNGNIITIAGNG-QQGYSGDNGPAVNAKLSSPVDVF 239

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S    E+Y+AD +++ IR + L+ G    +AG   +       +G  +G+     L  P
Sbjct: 240 VSSK-NEVYIADYQNTRIRKI-LENGNIITIAGNGKL------GYGGDNGLAVNAKLYSP 291

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
           +GV+ +++ ++Y+AD  N++I+K+    N + T+AG G+ G+ DG ++
Sbjct: 292 VGVFVSQDNEVYIADYQNNRIRKILENGN-IITIAGNGELGY-DGDSV 337



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 18/268 (6%)

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
           +A    P+ +  ++  + +Y+ADT NH +R+I   N  + T+AGNG +G     G    +
Sbjct: 4   NAQLFNPRSIFVSSSNDEVYIADTGNHTVRKI-LENGNIVTIAGNGQQGYSGDNGLAVNA 62

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL--NT 770
           QL+ SP  V     NE VYIA    ++I +    +G     +G+G ++  NG + L  N 
Sbjct: 63  QLV-SPSYVFVSSKNE-VYIADYQNNRIRK-ILENGNIITIAGNG-QQGYNGDNGLAVNA 118

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
             A PS + +S    E+Y+ADS + SIR + L+ G    +AG           +   +G 
Sbjct: 119 QLASPSSVCVSLK-NEVYIADSGNHSIRKI-LENGNIVTIAGNGQQ------GYNGDNGP 170

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALA 888
                L  P  V+   N ++Y+AD+ NH+I+K+    N + T+AG G+ G+   +G A+ 
Sbjct: 171 AVNAPLFDPSSVFVTPNDEVYIADTGNHRIRKILRNGN-IITIAGNGQQGYSGDNGPAVN 229

Query: 889 AQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           A+LS P  +  +    ++IAD  N  IR
Sbjct: 230 AKLSSPVDVFVSSKNEVYIADYQNTRIR 257



 Score = 40.4 bits (93), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 22/137 (16%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIV-----QIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           N ++I+D  + RI     +GN I      ++G  G+ GL      +A    P G+ + ++
Sbjct: 244 NEVYIADYQNTRIRKILENGNIITIAGNGKLGYGGDNGLAV----NAKLYSPVGV-FVSQ 298

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
            N +Y+AD +N+ +R+I   N  + T+AGNG  G  Y G         +S +D    P  
Sbjct: 299 DNEVYIADYQNNRIRKI-LENGNIITIAGNGELG--YDG---------DSVFDFSKYPHI 346

Query: 728 EKVYIAMAGQHQIWEHS 744
             +Y +  G+ ++ +HS
Sbjct: 347 GPIYSSTYGKAKLKKHS 363


>gi|186474205|ref|YP_001861547.1| redoxin domain-containing protein [Burkholderia phymatum STM815]
 gi|184196537|gb|ACC74501.1| Redoxin domain protein [Burkholderia phymatum STM815]
          Length = 604

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 4/180 (2%)

Query: 390 LFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRR 449
           +   N P+  Q  G +  +  + +     + +    T   +P+    + WLN+ PL   +
Sbjct: 250 MMSANLPAITQAAGVTPPAGTMMRASTAAAPLPVEGT---LPQLTGAVQWLNSPPLTAGQ 306

Query: 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNA 509
            L+GKVV++DFWTY CINC+  LP ++   +KY+DM   V+GVH+ +F  E++++ ++ A
Sbjct: 307 -LRGKVVLVDFWTYSCINCLRSLPYVKAWSQKYRDMGLVVIGVHAPEFAFERNIDNVKKA 365

Query: 510 VLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           V   G+ +PV  D +  +WR  G   WP    +   G++     GEG  +  + +++  L
Sbjct: 366 VHDLGVDYPVAIDNNYAIWRAFGNQYWPAHYFIDVQGRIRHHHFGEGEYEQSEKVIQQLL 425


>gi|290974765|ref|XP_002670115.1| predicted protein [Naegleria gruberi]
 gi|284083670|gb|EFC37371.1| predicted protein [Naegleria gruberi]
          Length = 784

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 187/384 (48%), Gaps = 40/384 (10%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFNRPQGLAYNAKKN 669
           N  ++I+D +++ I    L+GN I  I  +GEEG     G+   A  N P GL+ ++   
Sbjct: 165 NGEVYIADKSNHVIRKISLNGN-ISTIAGNGEEGFSGDGGNAKTAQLNSPIGLSISSTGE 223

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           L Y+AD++NH +R+ID  N  + T AGNGT       G +    LLN+P+ V +     +
Sbjct: 224 L-YIADSKNHVIRKID-ANGIISTFAGNGTINGYGGDGSQAKQALLNTPYGVFFYESTGE 281

Query: 730 VYIAMAGQHQIWEH------STVDGVTRAFSGDGYER---NLNGSSSLNTSFAQPSGISL 780
           VYIA      I +       STV GV  +    GY R   N+  +S+L    + P+ ++L
Sbjct: 282 VYIADTLNSLIRKVSKSGIISTVAGVPNS---SGYSREDENVPATSAL---LSAPTSVAL 335

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS-EVLLQHP 839
           S    E+++AD+ +  IR ++ K  G+ +     P F  ++ KF   DG  S +  + +P
Sbjct: 336 S-SLGEMFIADNGNLYIRKVDTK--GNSITLTLKPDFTGDVKKF-TGDGYNSQQAFVYYP 391

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPAGI 897
                    + ++A+S  HKI+K+ P +  +S  AG G  G+  DG+ A  A+ +EP  I
Sbjct: 392 KHACTNILDETFIAESAYHKIRKISP-NGIISQYAGTGDHGYSGDGSDAKLAKFNEPTRI 450

Query: 898 IEAQNGNLFIADTNNNIIRYLDLNKEEPEL--------QTLELKGVQPPTPKSRSPKRLR 949
             ++NG++FIAD  N  IR +  +    +         Q + L          RS   +R
Sbjct: 451 ACSKNGDIFIADLFNGAIRRIFASNGTVDTVVSGLGSPQAVILTESGELLVADRSSHVIR 510

Query: 950 RRSSPDAQTIVV----DGGLSNEG 969
           + S+    +I+     DGG + +G
Sbjct: 511 KISTNGVMSIIAGVLEDGGFNGDG 534



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 9/150 (6%)

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
           QP G++L P+  ++ ++D     I  LN K G   ++AG       +L   GD +G+ + 
Sbjct: 98  QPGGVALYPNSNDLLISDPVGGVIVRLNSK-GIQTIVAG----MKGDLGYSGD-NGLATR 151

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQL 891
             L  P GV  A NG++Y+AD  NH I+K+    N +ST+AG G+ GF    G A  AQL
Sbjct: 152 ARLNTPTGVAVASNGEVYIADKSNHVIRKISLNGN-ISTIAGNGEEGFSGDGGNAKTAQL 210

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           + P G+  +  G L+IAD+ N++IR +D N
Sbjct: 211 NSPIGLSISSTGELYIADSKNHVIRKIDAN 240



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 39/270 (14%)

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           F+RP   A +A  N+LY+ +     +R +D V+  + TL    TK  ++Q          
Sbjct: 54  FSRPNMFAISASSNILYMTEDSMTKIRMLDTVSG-ITTL----TKDLEFQ---------- 98

Query: 716 NSPWDVCYKPINEKVYIA--MAGQHQIWEHSTVDGVTRAFSGD-GY--ERNLNGSSSLNT 770
             P  V   P +  + I+  + G         +  +     GD GY  +  L   + LNT
Sbjct: 99  --PGGVALYPNSNDLLISDPVGGVIVRLNSKGIQTIVAGMKGDLGYSGDNGLATRARLNT 156

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
               P+G++++ +  E+Y+AD  +  IR ++L    S +   G+  F       GD  G 
Sbjct: 157 ----PTGVAVASN-GEVYIADKSNHVIRKISLNGNISTIAGNGEEGFS------GD-GGN 204

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA-GFKDGAALAA 889
                L  P+G+  +  G++Y+ADS NH I+K+D A+  +ST AG G   G+    + A 
Sbjct: 205 AKTAQLNSPIGLSISSTGELYIADSKNHVIRKID-ANGIISTFAGNGTINGYGGDGSQAK 263

Query: 890 Q--LSEPAGIIEAQN-GNLFIADTNNNIIR 916
           Q  L+ P G+   ++ G ++IADT N++IR
Sbjct: 264 QALLNTPYGVFFYESTGEVYIADTLNSLIR 293



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 153/389 (39%), Gaps = 88/389 (22%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQI----GSSGEEGLRDGSF 651
           T+ L  P  L+I      L+I+DS NH   V+  +D N I+      G+    G      
Sbjct: 207 TAQLNSPIGLSIS-STGELYIADSKNH---VIRKIDANGIISTFAGNGTINGYGGDGSQA 262

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG--NGTKGSDYQGGEK 709
             A  N P G+ +      +Y+ADT N  +R++   +  + T+AG  N +  S       
Sbjct: 263 KQALLNTPYGVFFYESTGEVYIADTLNSLIRKVS-KSGIISTVAGVPNSSGYSREDENVP 321

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST------------VDGVTRAFSGDG 757
            TS LL++P  V    + E ++IA  G   I +  T              G  + F+GDG
Sbjct: 322 ATSALLSAPTSVALSSLGE-MFIADNGNLYIRKVDTKGNSITLTLKPDFTGDVKKFTGDG 380

Query: 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF 817
           Y            +F      + +    E ++A+S    IR ++     S+    GD  +
Sbjct: 381 YNSQ--------QAFVYYPKHACTNILDETFIAESAYHKIRKISPNGIISQYAGTGDHGY 432

Query: 818 PDNLFKFGDRDGMGSEVLL---QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL- 873
                      G GS+  L     P  + C+KNG I++AD +N  I+++  ++  V T+ 
Sbjct: 433 ----------SGDGSDAKLAKFNEPTRIACSKNGDIFIADLFNGAIRRIFASNGTVDTVV 482

Query: 874 AGIGK----------------------------------------AGFK-DGAALAAQLS 892
           +G+G                                          GF  DG A   + S
Sbjct: 483 SGLGSPQAVILTESGELLVADRSSHVIRKISTNGVMSIIAGVLEDGGFNGDGLATKTKFS 542

Query: 893 EPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            P  I  A NG+L+IAD +N +IR L  N
Sbjct: 543 GPQDIALAPNGDLYIADYDNYLIRKLSKN 571



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 143/336 (42%), Gaps = 40/336 (11%)

Query: 586 SLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEG 645
           S E +N P   ++ L  P  +A+  L   +FI+D+ +  I   D  GN I         G
Sbjct: 314 SREDENVPAT-SALLSAPTSVALSSLG-EMFIADNGNLYIRKVDTKGNSITLTLKPDFTG 371

Query: 646 LRDGSFDDATFNRPQGLAY---NAKKNLL---YVADTENHALREIDFVNDTVRTLAGNGT 699
                F    +N  Q   Y   +A  N+L   ++A++  H +R+I   N  +   AG G 
Sbjct: 372 DVK-KFTGDGYNSQQAFVYYPKHACTNILDETFIAESAYHKIRKIS-PNGIISQYAGTGD 429

Query: 700 KGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDG-VTRAFSGDGY 758
            G    G             D      NE   IA +    I+     +G + R F+ +G 
Sbjct: 430 HGYSGDG------------SDAKLAKFNEPTRIACSKNGDIFIADLFNGAIRRIFASNGT 477

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
                   ++ +    P  + L+ +  E+ VAD  S  IR ++   G   ++AG   +  
Sbjct: 478 V------DTVVSGLGSPQAVILT-ESGELLVADRSSHVIRKIS-TNGVMSIIAG---VLE 526

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
           D  F   + DG+ ++     P  +  A NG +Y+AD  N+ I+KL    N ++T+AG G 
Sbjct: 527 DGGF---NGDGLATKTKFSGPQDIALAPNGDLYIADYDNYLIRKLSKNGN-ITTVAGNGD 582

Query: 879 A--GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           +  G   G A +  +  P+ +  ++ G +F +D NN
Sbjct: 583 STVGEDFGIATSTGIGYPSSVAVSKEGEVFFSDGNN 618



 Score = 40.8 bits (94), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 33/157 (21%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLA------GGDPIFPDNLFKFG 825
           F++P+  ++S     +Y+ +   + IR L+  +G + L        GG  ++P++     
Sbjct: 54  FSRPNMFAISASSNILYMTEDSMTKIRMLDTVSGITTLTKDLEFQPGGVALYPNS----- 108

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDG 884
                 +++L+  P+G      G I   +S    I+ +      V+ + G +G +G  +G
Sbjct: 109 ------NDLLISDPVG------GVIVRLNS--KGIQTI------VAGMKGDLGYSG-DNG 147

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            A  A+L+ P G+  A NG ++IAD +N++IR + LN
Sbjct: 148 LATRARLNTPTGVAVASNGEVYIADKSNHVIRKISLN 184


>gi|251772753|gb|EES53315.1| probable redoxin domain protein [Leptospirillum ferrodiazotrophum]
          Length = 350

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 74/131 (56%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W+N         L+GKVV+ DFW Y CINC+   P L+ + +KYKD    +VG+HS +FD
Sbjct: 48  WVNGQGPVSPPHLQGKVVLYDFWDYTCINCIRTFPHLDEIYRKYKDKGLVIVGIHSPEFD 107

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
                E +  A+ +Y I  PVV D D  LWR    + WP+  + GP+G LL    GEG  
Sbjct: 108 FAARPERVERAIAQYHIIFPVVLDKDQTLWRRFKNHYWPSDYLYGPDGTLLYHSIGEGGY 167

Query: 559 KDLDDLVEAAL 569
            +L+D + +AL
Sbjct: 168 DELEDSIVSAL 178


>gi|385205534|ref|ZP_10032404.1| cytochrome c biogenesis protein [Burkholderia sp. Ch1-1]
 gi|385185425|gb|EIF34699.1| cytochrome c biogenesis protein [Burkholderia sp. Ch1-1]
          Length = 622

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)

Query: 418 ISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
           ++D        ++P     + WLN+ PL  + DL+GKVV++DFWTY CINC+  LP ++ 
Sbjct: 292 VADAAPLPVEGVLPPLDGAVQWLNSPPLTLQ-DLRGKVVLIDFWTYSCINCLRSLPYVKA 350

Query: 478 LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
             +KYKD    V+GVH+ +F  E++++ ++ A    G+ +PV  D +  +WR L    WP
Sbjct: 351 WAQKYKDQGLVVIGVHAPEFAFERNIDNVKKATHDLGVDYPVAIDNNYAIWRALNNQYWP 410

Query: 538 TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
               +   G++     GEG   + + +++  L
Sbjct: 411 AHYFIDAKGQIRYHHFGEGDYAESERVIQQLL 442


>gi|73537745|ref|YP_298112.1| hypothetical protein Reut_B3911 [Ralstonia eutropha JMP134]
 gi|72121082|gb|AAZ63268.1| hypothetical protein Reut_B3911 [Ralstonia eutropha JMP134]
          Length = 189

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  +  L+GKVV++DFWTY CINC++ LP ++   +KYKD    VV
Sbjct: 39  PEFTEIDHWLNSPPLTMQ-SLRGKVVLVDFWTYSCINCINTLPYVKQWHEKYKDQGLVVV 97

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK    ++ A+ R+ I +PV  D     W       WP   ++  +G+++ 
Sbjct: 98  GVHTPEFPYEKSTANVQEAIRRFDIRYPVAQDNAYGTWSAFHNRYWPATYLIDADGRIVY 157

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q  GEG   + +  ++  L
Sbjct: 158 QHYGEGRYAETEAAIQKLL 176


>gi|150377436|ref|YP_001314031.1| redoxin domain-containing protein [Sinorhizobium medicae WSM419]
 gi|150031983|gb|ABR64098.1| Redoxin domain protein [Sinorhizobium medicae WSM419]
          Length = 592

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+   P +    +KYK+    V+
Sbjct: 279 PSLNGAVEWLNSPPLT-TEQLRGKVVLVDFWTYSCINCIRTTPYVRAWAEKYKEQGLVVI 337

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + I +PV  D D  +WR  G + WP   ++  +G++  
Sbjct: 338 GVHAPEFAFEKKIDNVRRAVDDFKIGYPVAIDNDYTIWRAFGNSYWPAHYLIDASGRIRY 397

Query: 551 QLAGEGHRKDLDDLVE 566
              GEG+    +  ++
Sbjct: 398 HHFGEGNYDQTEQAIQ 413


>gi|420244446|ref|ZP_14748222.1| cytochrome c biogenesis protein [Rhizobium sp. CF080]
 gi|398053644|gb|EJL45813.1| cytochrome c biogenesis protein [Rhizobium sp. CF080]
          Length = 591

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 4/146 (2%)

Query: 424 RKTTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           R + P+    P     ++WLN+APL   + L+GKVV++DFWTY CINC+  +P +    +
Sbjct: 268 RSSLPVEGRAPSLDGAVEWLNSAPLTAEQ-LRGKVVLVDFWTYSCINCIRTVPYVRAWAE 326

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           KYKD    V+GVH+ +F  EK ++ ++ AV  + I +PV  D D  +WR    + WP   
Sbjct: 327 KYKDQGLVVIGVHAPEFAFEKKIDNVKKAVGDFKIGYPVAIDNDYKIWRAFENSYWPAHY 386

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVE 566
           ++   G++     GEG+ +  +  ++
Sbjct: 387 LIDAKGQIRYHHFGEGNYRQSEQAIQ 412


>gi|405380128|ref|ZP_11033971.1| cytochrome c biogenesis protein [Rhizobium sp. CF142]
 gi|397323376|gb|EJJ27771.1| cytochrome c biogenesis protein [Rhizobium sp. CF142]
          Length = 609

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  +P ++   +KYKD    V
Sbjct: 295 MPPLDGAVQWLNSGPLTAEQ-LKGKVVLVDFWTYSCINCLRAIPYVKAWAEKYKDQGLVV 353

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS +F  EK+++ ++ A+   GI++PV  D D  +WR      WP    +   G++ 
Sbjct: 354 IGVHSPEFAFEKNVDNVKKAISDLGITYPVAVDNDYAIWRAFDNEYWPAHYFIDAKGQIR 413

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGK 574
               GEG     + +++  L   GK
Sbjct: 414 HHHFGEGDYDQSERVIQQLLAEAGK 438


>gi|291548919|emb|CBL25181.1| haloacid dehalogenase superfamily, subfamily IA, variant 3 with
           third motif having DD or ED/haloacid dehalogenase
           superfamily, subfamily IA, variant 1 with third motif
           having Dx(3-4)D or Dx(3-4)E [Ruminococcus torques L2-14]
          Length = 228

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAE-MGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           + AV+FDMDGVL N+E    +  V++F E  G+++  E + P +G+   +F+  +    G
Sbjct: 2   IKAVIFDMDGVLINTEPLHYQCWVEIFKERYGIDLDYEVYKPCIGSTRLHFMNLIKENYG 61

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
           +  F+S A   +  +   D+    +     PG  +++   K  G ++AVASS+ +  +  
Sbjct: 62  IT-FESLAVMNQIMKEKKDEIIARDGFPEMPGVGQMLCCLKDAGYRLAVASSSPKPVITE 120

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            L    L +  FD + S D  +N KPAPD FL A+K L VP  ECIVIED+  G +AAKA
Sbjct: 121 TLETLDL-MKYFDVVTSGDEVKNPKPAPDTFLFAAKQLGVPVDECIVIEDSTNGGKAAKA 179

Query: 258 AQMRCI 263
           A+M CI
Sbjct: 180 AKMLCI 185


>gi|333915269|ref|YP_004489001.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Delftia sp. Cs1-4]
 gi|333745469|gb|AEF90646.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Delftia sp. Cs1-4]
          Length = 609

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 1/149 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P      DWLN+ PL   + L+GKVV++DFWTY CINC+  LP ++   +KY+D    
Sbjct: 293 LAPALDGATDWLNSTPLTAEQ-LRGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLV 351

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVGVH+ +F  E+ L  +  A+   GIS+PV  D    +WR      WP    +   G++
Sbjct: 352 VVGVHAPEFAFERKLSNVEKAIKDLGISYPVAVDNGYKIWRAFNNQYWPAHYFIDAQGRI 411

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
                GEG   + + +++  L   G K++
Sbjct: 412 RHHHFGEGGYAESERVIQQLLQEAGSKQV 440


>gi|398838491|ref|ZP_10595767.1| cytochrome c biogenesis protein [Pseudomonas sp. GM102]
 gi|398115867|gb|EJM05641.1| cytochrome c biogenesis protein [Pseudomonas sp. GM102]
          Length = 595

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T PI   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 273 TLPIEGNLPSLDGAVQWLNSPPLT-AQALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKY 331

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D D  +WR      WP     
Sbjct: 332 RDQGLVVIGVHTPEFAFERDIGNVTKAMKDLGITYPVAIDNDYKVWRAFNNQYWPAHYFA 391

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G +K+ D 
Sbjct: 392 DARGRIRYHHFGEGKYAESERVIQQLLREAGAEKVADG 429


>gi|433611624|ref|YP_007195085.1| Cytochrome c biogenesis protein [Sinorhizobium meliloti GR4]
 gi|429556566|gb|AGA11486.1| Cytochrome c biogenesis protein [Sinorhizobium meliloti GR4]
          Length = 582

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 362 GVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVN----- 416
           GVA   L         + YAS  AI   L    R        G S  ER    V      
Sbjct: 205 GVAAIALGLDTGQLARLSYASTAAIEQSLLDGVR--------GDSVEERASTAVGGEGPA 256

Query: 417 YISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           Y SD+       + P     ++W+N+ PL   + L+GKVV++DFWTY CINC+  +P + 
Sbjct: 257 YRSDL---PVEGMFPPLDGAVEWVNSKPLSVEQ-LRGKVVLVDFWTYSCINCIRTIPYVR 312

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
              +KY+D    V+GVH+ +F  EK +  +R+AV  + I +PV  D D  +WR  G + W
Sbjct: 313 AWAEKYRDQGLVVIGVHAPEFAFEKRIANVRSAVTDFDIRYPVAIDNDFAIWRAFGNSYW 372

Query: 537 PTFAVVGPNGKLLAQLAGEG 556
           P    +   G++     GEG
Sbjct: 373 PAHYFIDAEGRIRHHHFGEG 392


>gi|394990509|ref|ZP_10383341.1| hypothetical protein SCD_02937 [Sulfuricella denitrificans skB26]
 gi|393790774|dbj|GAB72980.1| hypothetical protein SCD_02937 [Sulfuricella denitrificans skB26]
          Length = 548

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 1/152 (0%)

Query: 405 SSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYC 464
           ++QS + Q+    +   +   T    PEF     W+N  PL  +  LKGKVV++DFWTY 
Sbjct: 221 TTQSTKAQRPAGELVLQDGLSTPYAAPEFKDIEAWINANPLTMQ-SLKGKVVLIDFWTYS 279

Query: 465 CINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGD 524
           CINC+  LP +   + KY++    +VGVHS +F+ EK+L+ ++ A+ ++GI +PV  D  
Sbjct: 280 CINCVRTLPYITDWDSKYREQGLVIVGVHSPEFEFEKNLDNVKAAIAQHGIRYPVAQDNR 339

Query: 525 MNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           ++ W       WP   ++  +GK++    GEG
Sbjct: 340 LSTWLNFKNRYWPAHYLIDRDGKVVYTHFGEG 371


>gi|407724072|ref|YP_006843733.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
           meliloti Rm41]
 gi|407324132|emb|CCM72733.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
           meliloti Rm41]
          Length = 582

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 424 RKTTPIVPEFP---AKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           R   P+   FP     ++W+N+ PL   + L+GKVV++DFWTY CINC+  +P +    +
Sbjct: 258 RSDLPVEGMFPPLDGAVEWVNSKPLSVEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAE 316

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           KY+D    V+GVH+ +F  EK +  +R+AV  + I +PV  D D  +WR  G + WP   
Sbjct: 317 KYRDQGLVVIGVHAPEFAFEKRIANVRSAVTDFDIRYPVAIDNDFAIWRAFGNSYWPAHY 376

Query: 541 VVGPNGKLLAQLAGEG 556
            +   G++     GEG
Sbjct: 377 FIDAEGRIRHHHFGEG 392


>gi|384533895|ref|YP_005716559.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
           meliloti BL225C]
 gi|384539646|ref|YP_005723730.1| hypothetical protein SM11_pD1397 [Sinorhizobium meliloti SM11]
 gi|333816071|gb|AEG08738.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
           meliloti BL225C]
 gi|336038299|gb|AEH84229.1| conserved hypothetical protein [Sinorhizobium meliloti SM11]
          Length = 582

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 424 RKTTPIVPEFP---AKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           R   P+   FP     ++W+N+ PL   + L+GKVV++DFWTY CINC+  +P +    +
Sbjct: 258 RSDLPVEGMFPPLDGAVEWVNSKPLSVEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAE 316

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           KY+D    V+GVH+ +F  EK +  +R+AV  + I +PV  D D  +WR  G + WP   
Sbjct: 317 KYRDQGLVVIGVHAPEFAFEKRIANVRSAVTDFDIRYPVAIDNDFAIWRAFGNSYWPAHY 376

Query: 541 VVGPNGKLLAQLAGEG 556
            +   G++     GEG
Sbjct: 377 FIDAEGRIRHHHFGEG 392


>gi|334319910|ref|YP_004556539.1| cytochrome c biogenesis transmembrane protein [Sinorhizobium
           meliloti AK83]
 gi|334097649|gb|AEG55659.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
           meliloti AK83]
          Length = 582

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 424 RKTTPIVPEFP---AKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           R   P+   FP     ++W+N+ PL   + L+GKVV++DFWTY CINC+  +P +    +
Sbjct: 258 RSDLPVEGMFPPLDGAVEWVNSKPLSVEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAE 316

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           KY+D    V+GVH+ +F  EK +  +R+AV  + I +PV  D D  +WR  G + WP   
Sbjct: 317 KYRDQGLVVIGVHAPEFAFEKRIANVRSAVTDFDIRYPVAIDNDFAIWRAFGNSYWPAHY 376

Query: 541 VVGPNGKLLAQLAGEG 556
            +   G++     GEG
Sbjct: 377 FIDAEGRIRHHHFGEG 392


>gi|16263954|ref|NP_436746.1| hypothetical protein SM_b20213 [Sinorhizobium meliloti 1021]
 gi|15140078|emb|CAC48606.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
          Length = 627

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 424 RKTTPIVPEFP---AKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           R   P+   FP     ++W+N+ PL   + L+GKVV++DFWTY CINC+  +P +    +
Sbjct: 303 RSDLPVEGMFPPLDGAVEWVNSKPLSVEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAE 361

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           KY+D    V+GVH+ +F  EK +  +R+AV  + I +PV  D D  +WR  G + WP   
Sbjct: 362 KYRDQGLVVIGVHAPEFAFEKRIANVRSAVTDFDIRYPVAIDNDFAIWRAFGNSYWPAHY 421

Query: 541 VVGPNGKLLAQLAGEG 556
            +   G++     GEG
Sbjct: 422 FIDAEGRIRHHHFGEG 437


>gi|431806571|ref|YP_007233472.1| DipZ protein [Liberibacter crescens BT-1]
 gi|430800546|gb|AGA65217.1| DipZ protein [Liberibacter crescens BT-1]
          Length = 554

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 101/184 (54%), Gaps = 2/184 (1%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKTTPI-VPEFPAKLDWLNTAPLQFRRDLKGKVV 456
           F      SS +   + F + +S ++    TP   P+F   + WLN+ PL    +LK KV+
Sbjct: 219 FFSVSNDSSSTMIEKSFGSKVSGLQGTLETPYPAPKFIGLITWLNSKPLTIE-ELKNKVI 277

Query: 457 VLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIS 516
           ++DFWTY CINC+  LP ++   + Y++    ++G+H+ +F+ EK++  + NA++RY I 
Sbjct: 278 LIDFWTYSCINCIRTLPYIKRWYRDYREKGLIIIGIHAPEFEFEKNVANVNNAIIRYHIE 337

Query: 517 HPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKK 576
           +PV  D +++ W       WP   ++   G+++ +  GEG   + ++ +   L F  K  
Sbjct: 338 YPVALDNNLDTWTSFKNLYWPAHYLIDQKGRVVYKHFGEGSYLETENNIRYLLGFEKKID 397

Query: 577 LLDN 580
           ++++
Sbjct: 398 VIED 401


>gi|430809503|ref|ZP_19436618.1| cytochrome c biogenesis protein, transmembrane region [Cupriavidus
           sp. HMR-1]
 gi|429498017|gb|EKZ96533.1| cytochrome c biogenesis protein, transmembrane region [Cupriavidus
           sp. HMR-1]
          Length = 596

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 421 VENRKTTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
           V+   T P+  +FP     ++WLN+ PL     L+GKVV++DFWTY CINC+  LP ++ 
Sbjct: 267 VDRPATLPVEGQFPGLNGAVEWLNSPPLT-AEALRGKVVLVDFWTYSCINCLRTLPYVKA 325

Query: 478 LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
             +KY+D    V+GVH+ +F  E++++ +R A    G+++PV  D +  +WR    N WP
Sbjct: 326 WAEKYRDQGLVVIGVHAPEFAFERNIDNVRKATKDLGVTYPVAIDNNYAIWRAFNNNYWP 385

Query: 538 TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
               +   G++     GEG  +  + ++   L
Sbjct: 386 AHYFIDAQGRVRFHHFGEGEYEKSEAVIRQLL 417


>gi|239817393|ref|YP_002946303.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Variovorax paradoxus S110]
 gi|239803970|gb|ACS21037.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Variovorax paradoxus S110]
          Length = 596

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 79/163 (48%), Gaps = 1/163 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P      +W+N+APL     L+GKVV++DFWTY CINC+  LP L    +KYKD    V+
Sbjct: 281 PSLAGATEWINSAPLA-PEALRGKVVLVDFWTYSCINCLRTLPYLRAWAEKYKDAGLVVI 339

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F  EK    +R AV    I  PV  D D  +WR     +WP F  +   G++  
Sbjct: 340 GVHSPEFAFEKQPANVRKAVQDLDIGFPVALDNDFAIWRGFDNQAWPAFYFIDAEGRIRH 399

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDP 593
              GE      + +++  L   G+ ++      PL       P
Sbjct: 400 HQFGENRYDKAEQVIQQLLAEAGQTRIAAGLVAPLGQGTQAAP 442


>gi|399019542|ref|ZP_10721688.1| SCO1/SenC/PrrC protein [Herbaspirillum sp. CF444]
 gi|398097433|gb|EJL87737.1| SCO1/SenC/PrrC protein [Herbaspirillum sp. CF444]
          Length = 175

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  ++ L+GKVV++DFWTY CINC++ LP ++    KYKD    VV
Sbjct: 34  PEFSGIDKWLNSEPLTMQQ-LRGKVVLVDFWTYTCINCINTLPHVKSWYDKYKDQGLVVV 92

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+  + ++ A+ R+G+++PV  D     W       WP F ++   G+++ 
Sbjct: 93  GVHTPEYPFERSTDNVKTAIKRFGLTYPVAQDNRYATWTSYNNQYWPAFYLIDKKGQVVY 152

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  ++  L
Sbjct: 153 THFGEGQYAQTEAAIKNLL 171


>gi|322435786|ref|YP_004217998.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Granulicella tundricola MP5ACTX9]
 gi|321163513|gb|ADW69218.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Granulicella tundricola MP5ACTX9]
          Length = 621

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W+N+ PL     L GKVV++DFWTY CINC+  LP ++   +KYKD    V+GVH+ +F 
Sbjct: 315 WINSQPLTLAA-LHGKVVLIDFWTYSCINCLRTLPYIKAWNEKYKDSGLVVIGVHTPEFP 373

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            EKD   +R AV   G+++PV  D D  +WR      WP    +   GK+     GEG  
Sbjct: 374 FEKDESNVRKAVRDLGVTYPVAMDNDYRIWRSFNNEYWPAHYFIDATGKVRYHHFGEGGY 433

Query: 559 KDLDDLVEAAL 569
           ++ ++ + + L
Sbjct: 434 EESENWIRSLL 444


>gi|225872818|ref|YP_002754275.1| hypothetical protein ACP_1177 [Acidobacterium capsulatum ATCC
           51196]
 gi|225794459|gb|ACO34549.1| hypothetical protein ACP_1177 [Acidobacterium capsulatum ATCC
           51196]
          Length = 855

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 169/324 (52%), Gaps = 27/324 (8%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSF-DDATFNRPQ 660
           P  +A D   N L+I+D+N+N I      G  +  I  +GEEG   DG+    A  + P 
Sbjct: 81  PSAVAYDGSGN-LYIADTNNNVIREVSTTG-VVTTIAGNGEEGYSGDGAAATSAMLDTPT 138

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPW 719
           G+A ++  N+ Y+AD+ N+ +RE+   N  + T+AGNGT G  Y G G   TS +L+ P 
Sbjct: 139 GIAVDSNGNI-YIADSHNNRIREVS--NGIINTVAGNGTAG--YSGDGAAATSAMLDDPT 193

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTSFAQPSGI 778
            V     +  +YIA  G  +I   +   G     +G+G E  + +G+++ +     P+GI
Sbjct: 194 AVAVDA-SGNIYIADTGNQRI--RNVAAGTIHTVAGNGEEGYSGDGAAAASAELDTPTGI 250

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGG--SRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           ++      IY+ADS ++ IR ++   GG  + +   G   FP +   +    G  +   L
Sbjct: 251 AVDSSG-NIYIADSHNNRIREVS---GGVINTVAGSGAVTFPGS---YSGDGGSATAATL 303

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AALAAQLSEP 894
             P GV     G +Y+AD+ N +++++  A+  ++T+AG G+ G+  DG AA +A L++P
Sbjct: 304 AKPTGVALDAAGHVYIADTNNERLREI--ANGVIATVAGNGQQGYSGDGAAATSAALNDP 361

Query: 895 AGIIEAQNGNLFIADTNNNIIRYL 918
                  +G++ +ADT N  +R L
Sbjct: 362 RNASVNASGSVAVADTLNERVRGL 385



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 150/291 (51%), Gaps = 29/291 (9%)

Query: 635 IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           +   GS+G  G   G+   A F  P  +AY+   NL Y+ADT N+ +RE+      V T+
Sbjct: 58  VAGTGSAGYSG-NGGAATSAAFASPSAVAYDGSGNL-YIADTNNNVIREVS-TTGVVTTI 114

Query: 695 AGNGTKGSDYQG-GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAF 753
           AGNG +G  Y G G   TS +L++P  +     N  +YIA +  ++I E S  +G+    
Sbjct: 115 AGNGEEG--YSGDGAAATSAMLDTPTGIAVDS-NGNIYIADSHNNRIREVS--NGIINTV 169

Query: 754 SGDGYE-RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG 812
           +G+G    + +G+++ +     P+ +++      IY+AD+ +  IR  N+  G    +AG
Sbjct: 170 AGNGTAGYSGDGAAATSAMLDDPTAVAVDASG-NIYIADTGNQRIR--NVAAGTIHTVAG 226

Query: 813 GDPIFPDNLFKFGDRDGMGSEVL-LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS 871
                  N  +    DG  +    L  P G+    +G IY+ADS+N++I+++  +   ++
Sbjct: 227 -------NGEEGYSGDGAAAASAELDTPTGIAVDSSGNIYIADSHNNRIREV--SGGVIN 277

Query: 872 TLAGIGKAGF------KDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           T+AG G   F        G+A AA L++P G+     G+++IADTNN  +R
Sbjct: 278 TVAGSGAVTFPGSYSGDGGSATAATLAKPTGVALDAAGHVYIADTNNERLR 328



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 17/227 (7%)

Query: 693 TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
           T+AG G+ G    GG   TS    SP  V Y   +  +YIA    + I E ST  GV   
Sbjct: 57  TVAGTGSAGYSGNGGAA-TSAAFASPSAVAYDG-SGNLYIADTNNNVIREVSTT-GVVTT 113

Query: 753 FSGDGYE-RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLA 811
            +G+G E  + +G+++ +     P+GI++  +   IY+ADS ++ IR   +  G    +A
Sbjct: 114 IAGNGEEGYSGDGAAATSAMLDTPTGIAVDSNG-NIYIADSHNNRIR--EVSNGIINTVA 170

Query: 812 GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS 871
           G      +    +       +  +L  P  V    +G IY+AD+ N +I+ +  A+  + 
Sbjct: 171 G------NGTAGYSGDGAAATSAMLDDPTAVAVDASGNIYIADTGNQRIRNV--AAGTIH 222

Query: 872 TLAGIGKAGFK-DGAALAA-QLSEPAGIIEAQNGNLFIADTNNNIIR 916
           T+AG G+ G+  DGAA A+ +L  P GI    +GN++IAD++NN IR
Sbjct: 223 TVAGNGEEGYSGDGAAAASAELDTPTGIAVDSSGNIYIADSHNNRIR 269



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 39/212 (18%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL------RDGSFDD 653
           L  P  +A+D   N ++I+DS++NRI   ++ G  I  +  SG            GS   
Sbjct: 244 LDTPTGIAVDSSGN-IYIADSHNNRI--REVSGGVINTVAGSGAVTFPGSYSGDGGSATA 300

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTS 712
           AT  +P G+A +A  ++ Y+ADT N  LREI   N  + T+AGNG +G  Y G G   TS
Sbjct: 301 ATLAKPTGVALDAAGHV-YIADTNNERLREI--ANGVIATVAGNGQQG--YSGDGAAATS 355

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772
             LN P +     +N    +A+A                    D     + G +    ++
Sbjct: 356 AALNDPRNAS---VNASGSVAVA--------------------DTLNERVRGLTPPTLTY 392

Query: 773 A-QPSGISLSPDFMEIYVADSESSSIRALNLK 803
           A QP GI+ SP ++ I  A S + +I++LN+ 
Sbjct: 393 ASQPIGIASSPQYITIANAGSGTLAIQSLNIT 424



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 3/63 (4%)

Query: 856 YNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQLSEPAGIIEAQNGNLFIADTNNN 913
           Y   I ++ P ++  +T+AG G AG+    GAA +A  + P+ +    +GNL+IADTNNN
Sbjct: 42  YGQAILRVTPGTS-TATVAGTGSAGYSGNGGAATSAAFASPSAVAYDGSGNLYIADTNNN 100

Query: 914 IIR 916
           +IR
Sbjct: 101 VIR 103


>gi|418400977|ref|ZP_12974512.1| hypothetical protein SM0020_12792 [Sinorhizobium meliloti
           CCNWSX0020]
 gi|359505084|gb|EHK77611.1| hypothetical protein SM0020_12792 [Sinorhizobium meliloti
           CCNWSX0020]
          Length = 582

 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 362 GVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVN----- 416
           GVA   L         + YAS  AI   L    R        G S  ER    V      
Sbjct: 205 GVAAIALGLDTGQLARLSYASTAAIEQSLLDGVR--------GDSVEERASTAVGGEGPA 256

Query: 417 YISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           Y SD+       + P     ++W+N+ PL   + L+G+VV++DFWTY CINC+  +P + 
Sbjct: 257 YRSDL---PVEGMFPPLDGAVEWVNSKPLSVEQ-LRGRVVLVDFWTYSCINCIRTIPYVR 312

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
              +KY+D    V+GVH+ +F  EK +  +R+AV  + I +PV  D D  +WR  G + W
Sbjct: 313 AWAEKYRDQGLVVIGVHAPEFAFEKRIANVRSAVTDFDIRYPVAIDNDFAIWRAFGNSYW 372

Query: 537 PTFAVVGPNGKLLAQLAGEG 556
           P    +   G++     GEG
Sbjct: 373 PAHYFIDAEGRIRHHHFGEG 392


>gi|319791414|ref|YP_004153054.1| redoxin domain-containing protein [Variovorax paradoxus EPS]
 gi|315593877|gb|ADU34943.1| Redoxin domain protein [Variovorax paradoxus EPS]
          Length = 194

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL+ + DL+GKVV++DFWTY CINC++ LP ++    KYKD    VV
Sbjct: 41  PEFQNIDKWLNSEPLKLQ-DLRGKVVLVDFWTYTCINCLNHLPYVKDWNAKYKDKGLVVV 99

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK  + +++A+ R  I H V  D     W+      WP   ++   GK++ 
Sbjct: 100 GVHTPEFAYEKSTKNVQDAIKRLQIQHAVAQDNSYGTWKAFNNQYWPAVYLIDKQGKIVY 159

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  ++A L
Sbjct: 160 SHFGEGSYGTTEKKIQALL 178


>gi|264678859|ref|YP_003278766.1| cytochrome C biogenesis protein [Comamonas testosteroni CNB-2]
 gi|262209372|gb|ACY33470.1| cytochrome c biogenesis protein [Comamonas testosteroni CNB-2]
          Length = 610

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           I P       WLN+ PL   +DL+GKVV+LDFWTY CINC+  LP ++   +KY+D    
Sbjct: 294 IAPSLGGATQWLNSKPLS-GQDLRGKVVLLDFWTYSCINCLRTLPYVKAWAEKYRDQGLI 352

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVGVH+ +F  E+D+  +  A+   GI++PV  D    +WR      WP    +   G++
Sbjct: 353 VVGVHAPEFAFERDIGNVSKAMKDLGINYPVAVDNQYAIWRAFKNQYWPAHYFIDATGRI 412

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG   + + +++  L
Sbjct: 413 RHHHFGEGGYAESERVIQQLL 433


>gi|340344797|ref|ZP_08667929.1| Redoxin domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
 gi|339519938|gb|EGP93661.1| Redoxin domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
          Length = 369

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 79/139 (56%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+     ++ NT P +  +++KGKVV+ D WTY CINC+  LP +    +KY D    ++
Sbjct: 57  PQIVGIANYFNTTPEELAKEMKGKVVLYDIWTYSCINCVRTLPYIVAWNEKYSDEGLLII 116

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+HS +F+ EK  E + +A++++GI +PVV D DM  W+      WP   +    G +  
Sbjct: 117 GIHSPEFEFEKIPENVESAIIKHGIKYPVVMDNDMATWKAFENRYWPRKYIADDEGYIRY 176

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG  K+ + ++++ L
Sbjct: 177 DHIGEGDYKETEKVIQSLL 195


>gi|187919210|ref|YP_001888241.1| redoxin domain-containing protein [Burkholderia phytofirmans PsJN]
 gi|187717648|gb|ACD18871.1| Redoxin domain protein [Burkholderia phytofirmans PsJN]
          Length = 691

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           ++P     + WLN+ PL   +DL+GKVV++DFWTY CINC+  LP ++   +KYKD    
Sbjct: 372 VLPPLDGAVQWLNSPPLT-TQDLRGKVVLVDFWTYSCINCLRSLPYVKAWAQKYKDQGLV 430

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVH+ +F  E++++ ++ A    G+ +PV  D +  +WR L    WP    V   G++
Sbjct: 431 VIGVHAPEFAFERNIDNVKKATHDLGVDYPVAIDNNYAIWRALNNQYWPAHYFVDAKGQI 490

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG     + +++  L
Sbjct: 491 RYHHFGEGDYAGSEKVIQQLL 511


>gi|398858461|ref|ZP_10614150.1| cytochrome c biogenesis protein [Pseudomonas sp. GM79]
 gi|398238920|gb|EJN24639.1| cytochrome c biogenesis protein [Pseudomonas sp. GM79]
          Length = 595

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 1/151 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY+D    V
Sbjct: 280 LPSLDGAVQWLNSPPLT-AQALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLVV 338

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +  A+   GI++PV  D D  +WR      WP        G++ 
Sbjct: 339 IGVHTPEFAFERDVGNVTKAMKDLGITYPVAIDNDYKVWRAFNNQYWPAHYFADAQGRIR 398

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
               GEG   + + +++  L   G +K+ D 
Sbjct: 399 YHHFGEGKYAESERVIQQLLHEAGAEKVADG 429


>gi|86358028|ref|YP_469920.1| cytochrome biogenesis protein [Rhizobium etli CFN 42]
 gi|86282130|gb|ABC91193.1| putative cytochrome biogenesis protein [Rhizobium etli CFN 42]
          Length = 645

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P F   ++WLN+ PL  +  L+GKVV++DFWTY CINC+  +P +    +KY D    VV
Sbjct: 332 PSFDGAVEWLNSKPLT-KEQLRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVV 390

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ A+  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 391 GVHAPEFAFEKKIDNVKKAIGDFQIGYPVAIDNDYKIWRAFENSYWPAAYLIDAKGQIRY 450

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 451 HHFGEGNYGRTEKAIQDLLREA 472


>gi|152982695|ref|YP_001355019.1| hypothetical protein mma_3329 [Janthinobacterium sp. Marseille]
 gi|151282772|gb|ABR91182.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 172

 Score =  110 bits (275), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  ++ L+GKVV++DFWTY CINC+  LP ++   +KYKD    VV
Sbjct: 31  PEFTGIEKWLNSEPLTMQK-LRGKVVLVDFWTYACINCIRTLPYVKSWHEKYKDQGLAVV 89

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+  E +  A+ R+ I +PV  D     W       WP   ++   G+++ 
Sbjct: 90  GVHTPEYPFERSTENVSKAIQRFDIKYPVAQDNRYATWTAYSNQYWPAVYLINKKGQIVY 149

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG  ++ +  ++A L
Sbjct: 150 THFGEGKYQETEARIQALL 168


>gi|405378389|ref|ZP_11032311.1| cytochrome c biogenesis protein [Rhizobium sp. CF142]
 gi|397325061|gb|EJJ29404.1| cytochrome c biogenesis protein [Rhizobium sp. CF142]
          Length = 591

 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P +    +KYKD    V+
Sbjct: 278 PSLDGAVEWLNSPPLTAEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYKDQGLVVI 336

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ A+  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 337 GVHAPEFAFEKKIDNVKRAIGDFNIGYPVAIDNDYKIWRAFDNSYWPAHYLIDAKGQIRE 396

Query: 551 QLAGEGHRKDLDDLVE 566
              GEG+ +  +  ++
Sbjct: 397 HHFGEGNYRQTEQAIQ 412


>gi|113867755|ref|YP_726244.1| Thiol-disulfide isomerase and thioredoxins [Ralstonia eutropha H16]
 gi|113526531|emb|CAJ92876.1| Thiol-disulfide isomerase and thioredoxins [Ralstonia eutropha H16]
          Length = 212

 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL     L+GKVV++DFWTY C NC++ LP ++    KYKD    VV
Sbjct: 71  PEFTGIHQWLNSPPLSME-GLRGKVVLVDFWTYACGNCINTLPYVKQWHDKYKDQGLVVV 129

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK    ++ A+ R+ I +PV  D     W       WP   ++  NG+++ 
Sbjct: 130 GVHTPEFPFEKSTANVQAAIRRFDIRYPVAQDNAYATWSAFSNQYWPALYLIDANGRIVY 189

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           +  GEG   + +D +   L
Sbjct: 190 KHYGEGSYAETEDTIRKLL 208


>gi|94310115|ref|YP_583325.1| cytochrome c biogenesis protein, transmembrane region [Cupriavidus
           metallidurans CH34]
 gi|93353967|gb|ABF08056.1| cytochrome c biogenesis protein, transmembrane region [Cupriavidus
           metallidurans CH34]
          Length = 596

 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 421 VENRKTTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
           V+   T P+  +FP     ++WLN+ PL     L+G+VV++DFWTY CINC+  LP ++ 
Sbjct: 267 VDRPATLPVEGQFPGLNGAVEWLNSPPLT-AEALRGRVVLVDFWTYSCINCLRTLPYVKA 325

Query: 478 LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
             +KY+D    V+GVH+ +F  E++++ +R A    G+++PV  D +  +WR    N WP
Sbjct: 326 WAEKYRDQGLVVIGVHAPEFAFERNIDNVRKATKDLGVTYPVAIDNNYAIWRAFNNNYWP 385

Query: 538 TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
               +   G++     GEG  +  + ++   L
Sbjct: 386 AHYFIDAQGRVRFHHFGEGEYEKSEAVIRQLL 417


>gi|444909283|ref|ZP_21229474.1| Thiol-disulfide isomerase [Cystobacter fuscus DSM 2262]
 gi|444720232|gb|ELW61016.1| Thiol-disulfide isomerase [Cystobacter fuscus DSM 2262]
          Length = 181

 Score =  110 bits (274), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+F    +W+N+ PL   + L+GKVV+++FWTY CINC+ V P +     +Y D    VV
Sbjct: 41  PDFSGGGEWINSPPLSMSK-LRGKVVLVEFWTYSCINCLRVAPYVSQWHARYADQGLVVV 99

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+    +R AV R GI HPVV D    +W   G   WP   ++   G+++ 
Sbjct: 100 GVHTPEYGYERVSANVREAVQRLGIHHPVVQDNGYRIWNAYGNQYWPALYLIDSEGRVVY 159

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           +  GEG     +  ++A L
Sbjct: 160 RHFGEGDYDRTEARIQALL 178


>gi|424924783|ref|ZP_18348144.1| Cytochrome c biogenesis protein [Pseudomonas fluorescens R124]
 gi|404305943|gb|EJZ59905.1| Cytochrome c biogenesis protein [Pseudomonas fluorescens R124]
          Length = 602

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 1/151 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP +    +KY+D    V
Sbjct: 287 LPPLTGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRTLPYVRAWAEKYRDQGLVV 345

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +  A+   GI++PV  D D  +WR      WP        G++ 
Sbjct: 346 IGVHAPEFAFERDVGNVTKAMKELGINYPVAIDNDYKIWRAFNNEYWPAHYFADAQGRIR 405

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
               GEG   + + +++  L   G K + D 
Sbjct: 406 YHHFGEGDYAESERVIQQLLREAGAKTVADG 436


>gi|424887939|ref|ZP_18311542.1| LOW QUALITY PROTEIN: cytochrome c biogenesis protein [Rhizobium
           leguminosarum bv. trifolii WSM2012]
 gi|393173488|gb|EJC73532.1| LOW QUALITY PROTEIN: cytochrome c biogenesis protein [Rhizobium
           leguminosarum bv. trifolii WSM2012]
          Length = 645

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P ++   +KY D    V+
Sbjct: 332 PPLDGAVEWLNSKPLT-TEQLRGKVVLVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVI 390

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +RNAV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 391 GVHAPEFAFEKKVDNVRNAVGDFQIGYPVAIDNDYKIWRAFENSYWPAAYLIDAEGQIRY 450

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 451 HHFGEGNYGRTEKAIQDLLREA 472


>gi|417861457|ref|ZP_12506512.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Agrobacterium tumefaciens F2]
 gi|338821861|gb|EGP55830.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Agrobacterium tumefaciens F2]
          Length = 635

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           VP     ++WLN+ PL   + LKGKVV++DFWTY CINC+  +P +    +KY+D    V
Sbjct: 321 VPSLAGAVEWLNSQPLSMEQ-LKGKVVLVDFWTYSCINCLRAIPYVRAWAEKYRDQGLVV 379

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EK ++ ++ A+    I +PV  D D  +WR      WP    +   G++ 
Sbjct: 380 IGVHAPEFAFEKRIDNVKKAIADLDIGYPVAVDNDYAIWRAFNNQYWPAHYFIDAKGRVR 439

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGK 574
               GEG     + +++  L   GK
Sbjct: 440 YHHFGEGDYDRSERVIQQLLAEAGK 464


>gi|398903193|ref|ZP_10651503.1| cytochrome c biogenesis protein [Pseudomonas sp. GM50]
 gi|398177388|gb|EJM65069.1| cytochrome c biogenesis protein [Pseudomonas sp. GM50]
          Length = 595

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 1/151 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP +    +KY+D    V
Sbjct: 280 LPSLDGAVQWLNSPPLT-AQSLKGKVVLVDFWTYSCINCLRTLPYVRAWAEKYRDQGLVV 338

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D   +  A+   GI++PV  D D  +WR      WP        G++ 
Sbjct: 339 IGVHTPEFAFERDAGNVTKAMKDLGITYPVAIDNDYKVWRAFNNQYWPAHYFADAQGRIR 398

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
               GEG+  + + +++  L   G  K+ D 
Sbjct: 399 YHHFGEGNYAESERVIQQLLREAGAAKVADG 429


>gi|407462409|ref|YP_006773726.1| redoxin domain-containing protein [Candidatus Nitrosopumilus
           koreensis AR1]
 gi|407046031|gb|AFS80784.1| redoxin domain-containing protein [Candidatus Nitrosopumilus
           koreensis AR1]
          Length = 366

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 80/141 (56%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P+      +LNT P +  ++++GKV++ D WTY CINC+  LP +   + KY +    
Sbjct: 52  MAPDLVGIAHYLNTTPEELAKEMEGKVILYDIWTYSCINCIRTLPYITAWDDKYSEQGLL 111

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+G+HS +F+ EKD E ++ A+ ++GI++PVV D DM  W+      WP   +    G +
Sbjct: 112 VIGIHSPEFEFEKDPENVKMAIDKHGINYPVVMDNDMETWKAFENRYWPRKYIADHEGYI 171

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG  ++ + +++  L
Sbjct: 172 RYDHIGEGGYQETEKIIQQLL 192


>gi|307727166|ref|YP_003910379.1| Redoxin domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307587691|gb|ADN61088.1| Redoxin domain protein [Burkholderia sp. CCGE1003]
          Length = 670

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     +DWLN+ PL+   DL+GKVV+++FWTY CINC+  LP L+    +Y+D    V
Sbjct: 355 LPSLSGAVDWLNSPPLK-SSDLRGKVVIVNFWTYSCINCLRTLPYLKAWANRYRDQGLVV 413

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS +F  E ++  ++ A     I +PV  D ++ +W+      WP F +V  +G++ 
Sbjct: 414 IGVHSPEFAFEHNIANVKRAAADLHIDYPVAIDNNLAVWQAFDNQYWPAFYIVDAHGQIR 473

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  ++++   L
Sbjct: 474 YHHFGEGGYEKSEEVIRQLL 493


>gi|312198347|ref|YP_004018408.1| serine/threonine protein kinase [Frankia sp. EuI1c]
 gi|311229683|gb|ADP82538.1| serine/threonine protein kinase [Frankia sp. EuI1c]
          Length = 814

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 27/295 (9%)

Query: 635 IVQIGSSGEEGLRD--GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692
           +V I  +G+ G     G    A  + P G A +   NL Y AD +N+ +R I   + T+ 
Sbjct: 480 VVAIAGTGQAGFAGDGGPAAQAQLDHPYGPAMDGFGNL-YFADFDNNRVRRIS-PDGTIT 537

Query: 693 TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
           T+AGNG  G    GG   T+ +LN P  V   P    +YI      ++ + S  DG+ + 
Sbjct: 538 TVAGNGQPGFSGDGGPA-TAAMLNKPVAVAIGP-GGTLYIVDTFNMRVRQVSP-DGIIQT 594

Query: 753 FSGDGYERNLN----GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
            +G G ER  N    G  + N +   PSGI++     ++++AD+ +  +R + +  G   
Sbjct: 595 IAGSG-ERPWNPADDGGPATNAALWYPSGIAID-SAGDLFIADNGNDIVRRVGVD-GIIT 651

Query: 809 LLAGGDPIFPDNLFKFGD-RDGM-GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
            +AG         F +G   DG   ++ ++  P  V   + G+IY+ADSYNHKI+++   
Sbjct: 652 TVAG--------RFGYGSWGDGKPATQAMISKPFNVALDRQGRIYIADSYNHKIRRIG-L 702

Query: 867 SNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
              + T+AG G AG+    G A AA L +P G+     GN++I D+ NN +R +D
Sbjct: 703 DGVIETIAGTGVAGYSGDGGKATAATLRDPRGVTVDAAGNVYITDSGNNRVRRID 757


>gi|407363698|ref|ZP_11110230.1| Redoxin domain-containing protein [Pseudomonas mandelii JR-1]
          Length = 587

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY+D    V
Sbjct: 272 LPPLDGAVQWLNSPPLT-AQALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLVV 330

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +  A+   GI++PV  D D  +WR      WP        G++ 
Sbjct: 331 IGVHAPEFAFERDVGNVTKAMKDLGINYPVAIDNDYKIWRAFNNEYWPAHYFADAQGRIR 390

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
               GEG   + + +++  L   G  K+ D 
Sbjct: 391 YHHFGEGEYAESERVIQQLLREAGASKVADG 421


>gi|167588834|ref|ZP_02381222.1| Redoxin domain protein [Burkholderia ubonensis Bu]
          Length = 199

 Score =  109 bits (273), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE      W N+APL   + L+GKVV++DFWTY CINC+H +P +    +KY+D    V+
Sbjct: 42  PELAGIERWHNSAPLTLGQ-LRGKVVLVDFWTYSCINCIHTIPYVNDWYRKYRDQGLVVI 100

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+D   + +A+ R+GI +PV  D   + W   G   WP   ++  NG+++ 
Sbjct: 101 GVHTPEYPFERDARNVADALGRFGIRYPVAQDNRYDTWNAYGNRYWPALYLIDGNGRIVY 160

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  +  AL
Sbjct: 161 TRFGEGGYDKTEAAIRDAL 179


>gi|260821256|ref|XP_002605949.1| hypothetical protein BRAFLDRAFT_132236 [Branchiostoma floridae]
 gi|229291286|gb|EEN61959.1| hypothetical protein BRAFLDRAFT_132236 [Branchiostoma floridae]
          Length = 446

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 155/330 (46%), Gaps = 25/330 (7%)

Query: 600 LKFPGKLAIDILNNRLFISD-------SNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
           L +P  L  D  +N ++++D         + RI    L  ++I  +  S  +G +DG   
Sbjct: 66  LNYPWGLVFDKSDNSIYVADCGCPNSPHTNERIRRISLSDSWITTLAGS-SQGNQDGLGK 124

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGEKGT 711
           DA F+   G+  +    +LYV D+ N+ +R++      V+   GN   +  +++ G KG 
Sbjct: 125 DAHFHHTAGMVVDEDNAMLYVCDSSNNVIRQVSTRTGDVKAFGGNPDPRDVEWKDG-KGL 183

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771
                 P  +       ++++A    H I E S  D V +  +G   E+ L         
Sbjct: 184 EARFYHPQGLYLDAKQNRMFVADTDNHVIREMSMPDAVVKTVAGTPKEKGLVNGQGRAAK 243

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG---GDPIFPDNLFKFGDRD 828
           F  P+ ++  P    +YV+D  + +IR +NL+     +LAG   G+P F         +D
Sbjct: 244 FYHPTQMAYDPYTDILYVSDHFNHAIRTINLQGYEVDILAGSPKGEPGF---------KD 294

Query: 829 GMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL 887
           G G+   L +P G+ +   +  +YV +  N+ I+ + PA   V TLAG  + G+KDG+  
Sbjct: 295 GKGTAARLNYPEGIAFDTTHRVLYVVEFGNNCIRMVTPAG-IVKTLAGGPEPGYKDGSGS 353

Query: 888 AAQLSEPAGI-IEAQNGNLFIADTNNNIIR 916
           AA+   P G+ ++  N  +++ D  N+++R
Sbjct: 354 AARFFHPTGLTLDPTNKVIYVTDQYNHLVR 383



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 28/286 (9%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADT-------ENHALREIDFVNDTVRTLAGNGTK 700
           DG F DA  N P GL ++   N +YVAD         N  +R I   +  + TLAG+   
Sbjct: 58  DGFFLDARLNYPWGLVFDKSDNSIYVADCGCPNSPHTNERIRRISLSDSWITTLAGSS-- 115

Query: 701 GSDYQGGEKGTSQ--LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758
               QG + G  +    +    +     N  +Y+  +  + I + ST  G  +AF G+  
Sbjct: 116 ----QGNQDGLGKDAHFHHTAGMVVDEDNAMLYVCDSSNNVIRQVSTRTGDVKAFGGNPD 171

Query: 759 ERNL--NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI 816
            R++       L   F  P G+ L      ++VAD+++  IR +++     + +AG    
Sbjct: 172 PRDVEWKDGKGLEARFYHPQGLYLDAKQNRMFVADTDNHVIREMSMPDAVVKTVAGTPK- 230

Query: 817 FPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
                 + G  +G G      HP  + Y      +YV+D +NH I+ ++     V  LAG
Sbjct: 231 ------EKGLVNGQGRAAKFYHPTQMAYDPYTDILYVSDHFNHAIRTINLQGYEVDILAG 284

Query: 876 I--GKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYL 918
              G+ GFKDG   AA+L+ P GI  +  +  L++ +  NN IR +
Sbjct: 285 SPKGEPGFKDGKGTAARLNYPEGIAFDTTHRVLYVVEFGNNCIRMV 330



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 36/273 (13%)

Query: 606 LAIDILNNRLFISDSNHNRI-VVTDLDGNFIVQIGSSGEEGL--RDGSFDDATFNRPQGL 662
           + +D  N  L++ DS++N I  V+   G+     G+     +  +DG   +A F  PQGL
Sbjct: 134 MVVDEDNAMLYVCDSSNNVIRQVSTRTGDVKAFGGNPDPRDVEWKDGKGLEARFYHPQGL 193

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
             +AK+N ++VADT+NH +RE+   +  V+T+AG   +     G  +G +     P  + 
Sbjct: 194 YLDAKQNRMFVADTDNHVIREMSMPDAVVKTVAGTPKEKGLVNG--QGRAAKFYHPTQMA 251

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN-LNGSSSLNTSFAQ------- 774
           Y P  + +Y++    H I          R  +  GYE + L GS      F         
Sbjct: 252 YDPYTDILYVSDHFNHAI----------RTINLQGYEVDILAGSPKGEPGFKDGKGTAAR 301

Query: 775 ---PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
              P GI+       +YV +  ++ IR +    G  + LAGG    P+  +K    DG G
Sbjct: 302 LNYPEGIAFDTTHRVLYVVEFGNNCIRMVT-PAGIVKTLAGG----PEPGYK----DGSG 352

Query: 832 SEVLLQHPLGVYC-AKNGQIYVADSYNHKIKKL 863
           S     HP G+     N  IYV D YNH ++ +
Sbjct: 353 SAARFFHPTGLTLDPTNKVIYVTDQYNHLVRSV 385



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 768 LNTSFAQPSGISLSPDFMEIYVAD-------SESSSIRALNLKTGGSRLLAGGDPIFPDN 820
           L+     P G+        IYVAD         +  IR ++L       LAG        
Sbjct: 62  LDARLNYPWGLVFDKSDNSIYVADCGCPNSPHTNERIRRISLSDSWITTLAGSSQ----- 116

Query: 821 LFKFGDRDGMGSEVLLQHPLGVYCAK-NGQIYVADSYNHKIKKLDPASNRVSTLAG---I 876
               G++DG+G +    H  G+   + N  +YV DS N+ I+++   +  V    G    
Sbjct: 117 ----GNQDGLGKDAHFHHTAGMVVDEDNAMLYVCDSSNNVIRQVSTRTGDVKAFGGNPDP 172

Query: 877 GKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDL 920
               +KDG  L A+   P G+ ++A+   +F+ADT+N++IR + +
Sbjct: 173 RDVEWKDGKGLEARFYHPQGLYLDAKQNRMFVADTDNHVIREMSM 217



 Score = 43.5 bits (101), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEE-GLRDGSFDDATFNR 658
           L +P  +A D  +  L++ +  +N I +    G  IV+  + G E G +DGS   A F  
Sbjct: 302 LNYPEGIAFDTTHRVLYVVEFGNNCIRMVTPAG--IVKTLAGGPEPGYKDGSGSAARFFH 359

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFV 687
           P GL  +    ++YV D  NH +R +  V
Sbjct: 360 PTGLTLDPTNKVIYVTDQYNHLVRSVTAV 388


>gi|398853584|ref|ZP_10610183.1| cytochrome c biogenesis protein [Pseudomonas sp. GM80]
 gi|398239419|gb|EJN25130.1| cytochrome c biogenesis protein [Pseudomonas sp. GM80]
          Length = 602

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 280 TLPVEGQLPPLDGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKY 338

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D D  +WR      WP     
Sbjct: 339 RDQGLVVIGVHAPEFAFERDVGNVTKAMKELGINYPVAIDNDYRIWRAFNNEYWPAHYFA 398

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G K + D 
Sbjct: 399 DAQGRIRYHHFGEGDYAESERVIQQLLREAGAKTVADG 436


>gi|408405793|ref|YP_006863776.1| thiol-disulfide isomerase [Candidatus Nitrososphaera gargensis
           Ga9.2]
 gi|408366389|gb|AFU60119.1| thiol-disulfide isomerase [Candidatus Nitrososphaera gargensis
           Ga9.2]
          Length = 388

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 1/157 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + PE      ++NT  L    DL+GKVV++DFWTY CINC+  +P L    +KY D    
Sbjct: 65  LAPELAQISGYINT-DLVTLADLRGKVVLIDFWTYSCINCIRTIPYLNAWYEKYADDGLV 123

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           +VGVH+ +F+ EKD + ++ AV ++GI +PV  D D   W+      WP   +V   G +
Sbjct: 124 IVGVHTPEFEFEKDYDNVKAAVEKFGIKYPVAQDNDKGTWKAYENRYWPRKYLVDNEGYI 183

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
                GEG   + + ++++ LL       + NT  PL
Sbjct: 184 RYDHIGEGSYAETEKVIQSLLLERAAYMGITNTTTPL 220


>gi|418530228|ref|ZP_13096154.1| cytochrome C biogenesis protein [Comamonas testosteroni ATCC 11996]
 gi|371452781|gb|EHN65807.1| cytochrome C biogenesis protein [Comamonas testosteroni ATCC 11996]
          Length = 607

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           I P       WLN+ PL   +DL+GKVV++DFWTY CINC+  LP ++   +KY+D    
Sbjct: 291 IAPPLDGATQWLNSKPLG-EQDLRGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLI 349

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVH+ +F  E+D+  +  A+   GIS+PV  D    +WR      WP    +   G++
Sbjct: 350 VIGVHAPEFAFERDIGNVSKAMKDLGISYPVAVDNQYAIWRAFRNQYWPAHYFIDATGRI 409

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG   + + +++  L
Sbjct: 410 RHHHFGEGGYAESERVIQQLL 430


>gi|221066590|ref|ZP_03542695.1| cytochrome c biogenesis protein transmembrane region [Comamonas
           testosteroni KF-1]
 gi|220711613|gb|EED66981.1| cytochrome c biogenesis protein transmembrane region [Comamonas
           testosteroni KF-1]
          Length = 608

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           I P       WLN+ PL   +DL+GKVV++DFWTY CINC+  LP ++   +KY+D    
Sbjct: 292 IAPPLDGATQWLNSKPLD-GQDLRGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLV 350

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVH+ +F  E+D+  +  A+   GIS+PV  D    +WR      WP    +   G++
Sbjct: 351 VIGVHAPEFAFERDIGNVSKAMKDLGISYPVAVDNQYAIWRAFRNQYWPAHYFIDATGRI 410

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG   + + +++  L
Sbjct: 411 RHHHFGEGGYAESERVIQQLL 431


>gi|405345633|ref|ZP_11022426.1| hypothetical protein A176_0011 [Chondromyces apiculatus DSM 436]
 gi|397093682|gb|EJJ24379.1| hypothetical protein A176_0011 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 870

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 154/341 (45%), Gaps = 34/341 (9%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDG--NFIVQIGSSGEEGLRDG 649
           D  +F SP       A +++     ++D+ +NRI +   +G    +  I  SGE G RDG
Sbjct: 548 DTAMFQSPTGLAVTHAGEVV-----VADTRNNRIRLIQQEGAGRTVSTIAGSGELGHRDG 602

Query: 650 SFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND--TVRTLAGNGTKGSDYQGG 707
           +   A    P  +       L YVAD+ NH +R +D   +   VRT AG G       GG
Sbjct: 603 AGSQALLRSPTAVVAGPTGEL-YVADSGNHVIRRLDRGEEGWQVRTWAGQGFVAGFADGG 661

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR---AFSGDGYERNLNG 764
                   + P  +        VY+A    H+I     V   TR     +G G     + 
Sbjct: 662 P--ARARFSRPMALAVDAAG-NVYVADQDNHRI---RMVRAGTREVVTLAGTGTLGTADA 715

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR---LLAGGDPIFPDNL 821
               + SFA PS ++L      +YV D+ S  +R ++L+  GSR    LAG     P   
Sbjct: 716 VRGRDASFAAPSALALG-GVGTLYVLDTVSQRLRRVSLQ--GSRAVVTLAGTGAGTP--- 769

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN----RVSTLAGIG 877
             FG +DG GS+   +  LG+     G++ +AD+ N +++K+ P  N    RV T AG G
Sbjct: 770 --FGFQDGPGSDARFRAQLGMVMGPQGELLLADTANLRLRKIIPGENAAATRVFTFAGSG 827

Query: 878 KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           + G   G A AA LS P G+     G L+++D  N +IR +
Sbjct: 828 RVGTALGRADAADLSAPVGLAFDAGGLLYVSDAFNQVIRVV 868



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 14/158 (8%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL--LAGGDPIFPDNLFKFGDRDG 829
           F  P+G++++    E+ VAD+ ++ IR +  +  G  +  +AG          + G RDG
Sbjct: 552 FQSPTGLAVT-HAGEVVVADTRNNRIRLIQQEGAGRTVSTIAGSG--------ELGHRDG 602

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN--RVSTLAGIG-KAGFKDGAA 886
            GS+ LL+ P  V     G++YVADS NH I++LD      +V T AG G  AGF DG  
Sbjct: 603 AGSQALLRSPTAVVAGPTGELYVADSGNHVIRRLDRGEEGWQVRTWAGQGFVAGFADGGP 662

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEE 924
             A+ S P  +     GN+++AD +N+ IR +     E
Sbjct: 663 ARARFSRPMALAVDAAGNVYVADQDNHRIRMVRAGTRE 700



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIK--KLDPASNRVSTLAGIGKAGFK 882
           G +DG     + Q P G+     G++ VAD+ N++I+  + + A   VST+AG G+ G +
Sbjct: 541 GWQDGPADTAMFQSPTGLAVTHAGEVVVADTRNNRIRLIQQEGAGRTVSTIAGSGELGHR 600

Query: 883 DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934
           DGA   A L  P  ++    G L++AD+ N++IR LD  +E  +++T   +G
Sbjct: 601 DGAGSQALLRSPTAVVAGPTGELYVADSGNHVIRRLDRGEEGWQVRTWAGQG 652



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 29/264 (10%)

Query: 615 LFISDSNHNRIVVTDLD-GNFIVQI----GSSGEEGLRDGSFDDATFNRPQGLAYNAKKN 669
           L+++DS ++  V+  LD G    Q+    G     G  DG    A F+RP  LA +A  N
Sbjct: 623 LYVADSGNH--VIRRLDRGEEGWQVRTWAGQGFVAGFADGGPARARFSRPMALAVDAAGN 680

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           + YVAD +NH +R +      V TLAG GT G+      +G      +P  +    +   
Sbjct: 681 V-YVADQDNHRIRMVRAGTREVVTLAGTGTLGT--ADAVRGRDASFAAPSALALGGVGTL 737

Query: 730 VYIAMAGQH--QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
             +    Q   ++    +   VT A +G G           +  F    G+ + P   E+
Sbjct: 738 YVLDTVSQRLRRVSLQGSRAVVTLAGTGAGTPFGFQDGPGSDARFRAQLGMVMGPQ-GEL 796

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL------LQHPLG 841
            +AD+        NL+    R +  G+      +F F     +G+ +       L  P+G
Sbjct: 797 LLADTA-------NLRL---RKIIPGENAAATRVFTFAGSGRVGTALGRADAADLSAPVG 846

Query: 842 VYCAKNGQIYVADSYNHKIKKLDP 865
           +     G +YV+D++N  I+ + P
Sbjct: 847 LAFDAGGLLYVSDAFNQVIRVVTP 870


>gi|329766557|ref|ZP_08258100.1| redoxin domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329136812|gb|EGG41105.1| redoxin domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 373

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 4/166 (2%)

Query: 406 SQSERIQQFVNYISDVE--NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           S+++ IQQ  N ++D+   ++      P+     +++N  P + +  +   VV+ D WTY
Sbjct: 36  SKNDSIQQ--NTVNDITKIDKSGFKKAPKLVGISEYINIQPDKLQEKIDHSVVLYDIWTY 93

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+  LP +    +KY D    ++G+HS +F+ EKD+  ++NAV +YGI++PVV D 
Sbjct: 94  SCINCIRTLPFITSWNEKYADQGLLIIGIHSPEFEFEKDVTNVKNAVEKYGITYPVVLDN 153

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           D   W+  G N WP   +    G +     GEG  ++ + +++  L
Sbjct: 154 DKETWKAFGNNYWPRKYIADSEGYIRYDHIGEGGYQETEKIIQQLL 199


>gi|397698007|ref|YP_006535890.1| redoxin domain-containing protein [Pseudomonas putida DOT-T1E]
 gi|397334737|gb|AFO51096.1| redoxin domain-containing protein [Pseudomonas putida DOT-T1E]
          Length = 171

 Score =  109 bits (272), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           ++ R +   +P       WLN+ PL     LKGKVV++DFWT+ CINC   LP +    +
Sbjct: 20  LKARDSYGAMPSLSGASQWLNSPPLD-APGLKGKVVLVDFWTWDCINCRRSLPHVNDWAR 78

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +Y D    VVGVH+ +FD E D+  +R+ V R GI +PV  D D  +W   G   WP   
Sbjct: 79  RYADQGLVVVGVHTPEFDYEHDVATLRDKVARLGIGYPVAVDNDYKVWNAWGNQFWPAHY 138

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            V   G++     GEG   + + +++A L
Sbjct: 139 FVDRKGQVRHVHVGEGDYGEQEQVIQALL 167


>gi|398891970|ref|ZP_10645217.1| cytochrome c biogenesis protein [Pseudomonas sp. GM55]
 gi|398186174|gb|EJM73556.1| cytochrome c biogenesis protein [Pseudomonas sp. GM55]
          Length = 591

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 269 TLPVEGNLPSLEGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKY 327

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 328 RDQGLVVIGVHAPEFAFERDINNVTKAMKDLGINYPVAIDNEFRIWRAFNNEYWPAHYFA 387

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G  K+ D 
Sbjct: 388 DAQGRIRYHHFGEGEYAESERVIQQLLREAGAAKVADG 425


>gi|223935789|ref|ZP_03627704.1| NHL repeat containing protein [bacterium Ellin514]
 gi|223895390|gb|EEF61836.1| NHL repeat containing protein [bacterium Ellin514]
          Length = 755

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 163/365 (44%), Gaps = 70/365 (19%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D  N  ++++D+ ++ I    LDG      G++G  G  + +  +A F  P+ +
Sbjct: 105 PQGVAVDT-NGIVYVADTGNHIIRKIALDGTVSTLAGAAGNPGTLNATGTNAQFYEPEAV 163

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN----GTKGSDYQ------------- 705
           A N   +L+YVADT NH +R++      V TLAG     GT    YQ             
Sbjct: 164 AVNGNGSLIYVADTWNHEIRQVTSAG-VVTTLAGTPGVIGTGSLFYQPQGIAVGSDGNIY 222

Query: 706 --------------GGEKGTSQLLNSPWDVC-----------YKPI------NEKVYIAM 734
                         GG    + L  SP +             Y+P+      N  VY+A 
Sbjct: 223 VADTGNGTIRVIPPGGS--VTTLAGSPGNYGSTNGTGSAAQFYQPMGVAVAANGTVYVAD 280

Query: 735 AGQHQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793
              H I    T  GV    +G  G   + +G+ S N  F  P G+++S     ++V D+ 
Sbjct: 281 NLNHTI-RAVTSGGVVTTLAGLAGNYGSKDGTGS-NARFYAPQGVAVSGS--TVFVVDTG 336

Query: 794 SSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYV 852
           + +IR   + +GG+   LAG   I        G+ DG G       P G     +G ++V
Sbjct: 337 NGTIR--QISSGGAVTTLAGSASI--------GNADGTGGSAKFYWPKGTAVDASGNVFV 386

Query: 853 ADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN 911
           +D++NH I+K+  A+  VSTLAG  G +G  +G    AQ   P GI     GN ++ADT 
Sbjct: 387 SDTFNHTIRKI-TAAGTVSTLAGTAGSSGTNNGVGGGAQFYAPQGIAVDTGGNAYVADTA 445

Query: 912 NNIIR 916
           NN+IR
Sbjct: 446 NNVIR 450



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 144/304 (47%), Gaps = 35/304 (11%)

Query: 616 FISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675
           F+  S+   + V+ L GN          +G  DG+   A FN P G+A +   NL YVAD
Sbjct: 16  FVPLSHSQPLTVSTLAGNA--------GQGSADGNNSSARFNLPGGVAVDKTGNL-YVAD 66

Query: 676 TENHALREIDFVNDTVRTLAG-NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           T NH +R+I      V T AG  G  GS      KG++   N P  V     N  VY+A 
Sbjct: 67  TANHTIRKIS--GGVVSTFAGLAGVSGSAN---GKGSAARFNQPQGVAVD-TNGIVYVAD 120

Query: 735 AGQHQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793
            G H I + + +DG     +G  G    LN ++  N  F +P  ++++ +   IYVAD+ 
Sbjct: 121 TGNHIIRKIA-LDGTVSTLAGAAGNPGTLN-ATGTNAQFYEPEAVAVNGNGSLIYVADTW 178

Query: 794 SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVA 853
           +  IR +    G    LAG   +             +G+  L   P G+    +G IYVA
Sbjct: 179 NHEIRQV-TSAGVVTTLAGTPGV-------------IGTGSLFYQPQGIAVGSDGNIYVA 224

Query: 854 DSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           D+ N  I+ + P  + V+TLAG  G  G  +G   AAQ  +P G+  A NG +++AD  N
Sbjct: 225 DTGNGTIRVIPPGGS-VTTLAGSPGNYGSTNGTGSAAQFYQPMGVAVAANGTVYVADNLN 283

Query: 913 NIIR 916
           + IR
Sbjct: 284 HTIR 287



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 13/322 (4%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
           S  +F     + +  + +F+ D+ +  I      G  +  +  S   G  DG+   A F 
Sbjct: 313 SNARFYAPQGVAVSGSTVFVVDTGNGTIRQIS-SGGAVTTLAGSASIGNADGTGGSAKFY 371

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            P+G A +A  N+ +V+DT NH +R+I     TV TLAG  T GS       G      +
Sbjct: 372 WPKGTAVDASGNV-FVSDTFNHTIRKITAAG-TVSTLAG--TAGSSGTNNGVGGGAQFYA 427

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           P  +         Y+A    + I + ++   VT      G E   +G+ S N  F+ P  
Sbjct: 428 PQGIAVD-TGGNAYVADTANNVIRKVTSGGTVTTLAGTAGVEGQGDGTGS-NAQFSGPQA 485

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           ++L      +YV+D+ + +IR   +  GG+     G P  P NL    D +G  +     
Sbjct: 486 VALD-GAANVYVSDTGNHTIR--KISPGGAVTTFAGFPGHPGNLDSNMDNNGT-NTARFY 541

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAG 896
            P G+    +G +YVAD+ NH I+K+  A   VSTLAG+ G  G  DG    A+  +P G
Sbjct: 542 SPSGLAVDSSGNVYVADTGNHTIRKIT-ADGSVSTLAGLPGVWGNADGTNRDARFFQPEG 600

Query: 897 IIEAQNGNLFIADTNNNIIRYL 918
           I     GNLF+ D+ N+ +R L
Sbjct: 601 ISIDSQGNLFVMDSGNHTMRML 622



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 154/325 (47%), Gaps = 28/325 (8%)

Query: 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
           +P   A+D   N +F+SD+ ++ I      G      G++G  G  +G    A F  PQG
Sbjct: 372 WPKGTAVDASGN-VFVSDTFNHTIRKITAAGTVSTLAGTAGSSGTNNGVGGGAQFYAPQG 430

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDV 721
           +A +   N  YVADT N+ +R++     TV TLAG  T G + QG   G++   + P  V
Sbjct: 431 IAVDTGGNA-YVADTANNVIRKVT-SGGTVTTLAG--TAGVEGQGDGTGSNAQFSGPQAV 486

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG-DGYERNLNGS---SSLNTS-FAQPS 776
                   VY++  G H I + S    VT  F+G  G+  NL+ +   +  NT+ F  PS
Sbjct: 487 ALDGA-ANVYVSDTGNHTIRKISPGGAVTT-FAGFPGHPGNLDSNMDNNGTNTARFYSPS 544

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           G+++      +YVAD+ + +IR +    G    LAG     P     +G+ DG   +   
Sbjct: 545 GLAVDSS-GNVYVADTGNHTIRKITAD-GSVSTLAG----LPG---VWGNADGTNRDARF 595

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAG---IGKAGFKDGAALAAQL 891
             P G+     G ++V DS NH ++ L  +     V+T+AG   +G A   DG    AQ 
Sbjct: 596 FQPEGISIDSQGNLFVMDSGNHTMRMLIASGTNWIVTTIAGQPDLGGA--ADGTGNGAQF 653

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIR 916
             P G+    +G   +AD+ NN IR
Sbjct: 654 YYPGGLGLNNSGFFAVADSGNNTIR 678



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 141/333 (42%), Gaps = 40/333 (12%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           N  ++++D+ ++ I      G      G +G  G +DG+  +A F  PQG+A +     +
Sbjct: 273 NGTVYVADNLNHTIRAVTSGGVVTTLAGLAGNYGSKDGTGSNARFYAPQGVAVSGST--V 330

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKG-SDYQGGE------KGTSQLLNSPWDVCYK 724
           +V DT N  +R+I      V TLAG+ + G +D  GG       KGT+            
Sbjct: 331 FVVDTGNGTIRQIS-SGGAVTTLAGSASIGNADGTGGSAKFYWPKGTA-----------V 378

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
             +  V+++    H I    T  G     +G       N        F  P GI++    
Sbjct: 379 DASGNVFVSDTFNHTI-RKITAAGTVSTLAGTAGSSGTNNGVGGGAQFYAPQGIAVDTG- 436

Query: 785 MEIYVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              YVAD+ ++ IR   + +GG+   LAG   +        G  DG GS      P  V 
Sbjct: 437 GNAYVADTANNVIR--KVTSGGTVTTLAGTAGVE-------GQGDGTGSNAQFSGPQAVA 487

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAG-----FKDGAALAAQLSEPAGI 897
                 +YV+D+ NH I+K+ P    V+T AG  G  G       +     A+   P+G+
Sbjct: 488 LDGAANVYVSDTGNHTIRKISPGG-AVTTFAGFPGHPGNLDSNMDNNGTNTARFYSPSGL 546

Query: 898 IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTL 930
               +GN+++ADT N+ IR +  +     L  L
Sbjct: 547 AVDSSGNVYVADTGNHTIRKITADGSVSTLAGL 579



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 109/234 (46%), Gaps = 30/234 (12%)

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749
           TV TLAGN  +GS        +S   N P  V        +Y+A    H I + S   GV
Sbjct: 26  TVSTLAGNAGQGSAD---GNNSSARFNLPGGVAVDKTGN-LYVADTANHTIRKIS--GGV 79

Query: 750 TRAFSG-DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
              F+G  G   + NG  S    F QP G+++  + + +YVAD+ +  IR + L  G   
Sbjct: 80  VSTFAGLAGVSGSANGKGSA-ARFNQPQGVAVDTNGI-VYVADTGNHIIRKIALD-GTVS 136

Query: 809 LLAG--GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDP 865
            LAG  G+P         G  +  G+      P  V    NG  IYVAD++NH+I+++  
Sbjct: 137 TLAGAAGNP---------GTLNATGTNAQFYEPEAVAVNGNGSLIYVADTWNHEIRQVTS 187

Query: 866 ASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           A   V+TLAG  G  G        +   +P GI    +GN+++ADT N  IR +
Sbjct: 188 AG-VVTTLAGTPGVIG------TGSLFYQPQGIAVGSDGNIYVADTGNGTIRVI 234



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D   N  +++D+ +N I      G      G++G EG  DG+  +A F+ PQ +
Sbjct: 428 PQGIAVDTGGNA-YVADTANNVIRKVTSGGTVTTLAGTAGVEGQGDGTGSNAQFSGPQAV 486

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGS-DYQGGEKGTSQL-LNSPW 719
           A +   N+ YV+DT NH +R+I      V T AG  G  G+ D      GT+     SP 
Sbjct: 487 ALDGAANV-YVSDTGNHTIRKIS-PGGAVTTFAGFPGHPGNLDSNMDNNGTNTARFYSPS 544

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGI 778
            +     +  VY+A  G H I    T DG     +G  G   N +G++  +  F QP GI
Sbjct: 545 GLAVDS-SGNVYVADTGNHTI-RKITADGSVSTLAGLPGVWGNADGTNR-DARFFQPEGI 601

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLA--GGDPIFPDNLFKFGDRDGMGSEVLL 836
           S+      ++V DS + ++R L + +G + ++    G P         G  DG G+    
Sbjct: 602 SIDSQ-GNLFVMDSGNHTMRML-IASGTNWIVTTIAGQPDLG------GAADGTGNGAQF 653

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
            +P G+    +G   VADS N+ I+   P
Sbjct: 654 YYPGGLGLNNSGFFAVADSGNNTIRAGVP 682



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKD 883
           G  DG  S      P GV   K G +YVAD+ NH I+K+  +   VST AG+ G +G  +
Sbjct: 37  GSADGNNSSARFNLPGGVAVDKTGNLYVADTANHTIRKI--SGGVVSTFAGLAGVSGSAN 94

Query: 884 GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPEL 927
           G   AA+ ++P G+    NG +++ADT N+IIR + L+     L
Sbjct: 95  GKGSAARFNQPQGVAVDTNGIVYVADTGNHIIRKIALDGTVSTL 138


>gi|398937756|ref|ZP_10667422.1| cytochrome c biogenesis protein [Pseudomonas sp. GM41(2012)]
 gi|398166524|gb|EJM54618.1| cytochrome c biogenesis protein [Pseudomonas sp. GM41(2012)]
          Length = 591

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY+D    V
Sbjct: 276 LPPLDGAVQWLNSPPLT-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKYRDQGLVV 334

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +  A+   GI++PV  D D  +WR      WP        G++ 
Sbjct: 335 IGVHAPEFAFERDVGNVTKAMKDLGINYPVAIDNDFKVWRAFNNQYWPAHYFADAQGRIR 394

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
               GEG   + + +++  L   G  K+ D 
Sbjct: 395 YHHFGEGEYAESERVIQQLLREAGAAKVADG 425


>gi|393796804|ref|ZP_10380168.1| redoxin domain-containing protein [Candidatus Nitrosoarchaeum
           limnia BG20]
          Length = 373

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 4/166 (2%)

Query: 406 SQSERIQQFVNYISDVE--NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           S+++ IQQ  N ++D+   ++      P+     +++N  P + +  +   VV+ D WTY
Sbjct: 36  SKNDSIQQ--NTVNDITKIDKSGFKKAPKLVGISEYINIQPDKLQEKIDHSVVLYDIWTY 93

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC+  LP +    +KY D    ++G+HS +F+ EKD+  ++NAV +YGI++PVV D 
Sbjct: 94  SCINCIRTLPFITSWNEKYADQGLLIIGIHSPEFEFEKDVTNVKNAVEKYGITYPVVLDN 153

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           D   W+  G N WP   +    G +     GEG  ++ + +++  L
Sbjct: 154 DKETWKAFGNNYWPRKYIADSEGYIRYDHIGEGGYQETEKIIQQLL 199


>gi|116252487|ref|YP_768325.1| transmembrane thioredoxin/DipZ protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115257135|emb|CAK08230.1| putative transmembrane thioredoxin/DipZ protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 657

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 13/216 (6%)

Query: 362 GVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDV 421
           GVA   L    S    + YAS  ++   +  ++R   +   G SS+    +  +   +D 
Sbjct: 273 GVAVIALGLDTSLLARLSYASTASLEQAV--LDRLHAKPLSGASSELASNEVMIA-AADA 329

Query: 422 EN--RKTTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLE 476
           +N  R   P+    P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P + 
Sbjct: 330 KNPFRSDLPVEGHAPSLAGAVEWLNSEPLT-TEQLRGKVVLVDFWTYSCINCIRTIPYVR 388

Query: 477 FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSW 536
              +KY D    V+GVH+ +F  EK ++ +R A+  + I +PV  D D ++WR    + W
Sbjct: 389 AWAEKYADQGLVVIGVHAPEFAFEKKVDNVRKAIGDFQIGYPVAIDNDYSIWRAFQNSYW 448

Query: 537 PTFAVVGPNGKLLAQLAGEGH----RKDLDDLVEAA 568
           P   ++   G++     GEG+     K + DL+  A
Sbjct: 449 PAAYLIDAKGQIRYHHFGEGNYNRTEKAIQDLLREA 484


>gi|398355860|ref|YP_006401324.1| protein DipZ [Sinorhizobium fredii USDA 257]
 gi|390131186|gb|AFL54567.1| protein DipZ [Sinorhizobium fredii USDA 257]
          Length = 586

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 4/149 (2%)

Query: 424 RKTTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           R   P+   FP+    ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P +    +
Sbjct: 262 RSNLPVEGTFPSLDGAVEWLNSEPLSVEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAE 320

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           KY+D    V+GVH+ +F  E+  + ++ AV  + I +PV  D +  +WR  G + WP   
Sbjct: 321 KYRDQGLVVIGVHAPEFAFERRFDNVKRAVRDFEIGYPVAIDNEFAIWRAFGNSYWPAHY 380

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            +   G++     GEG  +  + +++  L
Sbjct: 381 FIDAAGRIRHHHFGEGDYEQSERVIQELL 409


>gi|421746642|ref|ZP_16184424.1| hypothetical protein B551_08067 [Cupriavidus necator HPC(L)]
 gi|409774787|gb|EKN56354.1| hypothetical protein B551_08067 [Cupriavidus necator HPC(L)]
          Length = 180

 Score =  109 bits (272), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL  +  L+GKVV++DFWTY CINC++ LP ++    KYKD    VV
Sbjct: 38  PEFVGIDRWLNSQPLSMQ-GLRGKVVLVDFWTYSCINCINTLPYVKQWHDKYKDQGLVVV 96

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK    ++ A+ R+ I +PV  D     W       WP   +V   G+++ 
Sbjct: 97  GVHTPEFPFEKSTANVQAAIKRFDIRYPVAQDNGYATWSAYHNRYWPALYLVDAEGRIVY 156

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           Q  GEG   + +  +  AL
Sbjct: 157 QHFGEGQYAETEAAIRNAL 175


>gi|398809820|ref|ZP_10568661.1| thiol-disulfide isomerase-like thioredoxin [Variovorax sp. CF313]
 gi|398084912|gb|EJL75583.1| thiol-disulfide isomerase-like thioredoxin [Variovorax sp. CF313]
          Length = 187

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL+   +L+GKVV++DFWTY CINC++ LP ++   +KYKD    VV
Sbjct: 44  PEFQNIDSWLNSPPLKLS-ELRGKVVLVDFWTYTCINCLNHLPYVKEWNEKYKDKGLVVV 102

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK  + +++A+ R  I H V  D     W+      WP   ++   GK++ 
Sbjct: 103 GVHTPEFAYEKSTKNVKDAIARLQIKHAVAQDNSYGTWKAFRNQYWPAVYLIDKQGKIVY 162

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     +  ++A L
Sbjct: 163 SHFGEGSYGTTEKKIQALL 181


>gi|444308889|ref|ZP_21144530.1| redoxin domain-containing protein [Ochrobactrum intermedium M86]
 gi|443487658|gb|ELT50419.1| redoxin domain-containing protein [Ochrobactrum intermedium M86]
          Length = 591

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+  LP +    +KYKD    V+
Sbjct: 278 PSLDGAVEWLNSPPLT-NEQLRGKVVLVDFWTYSCINCIRTLPYVRAWAEKYKDQGLVVI 336

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ AV  + I +PV  D +  +WR    + WP   ++   G++  
Sbjct: 337 GVHAPEFAFEKKIDNVKKAVADFKIGYPVAIDNNYRIWRAFENSYWPAHYLIDAKGQIRH 396

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG+    +  ++  L
Sbjct: 397 HHFGEGNYSGTEQAIQELL 415


>gi|395235694|ref|ZP_10413900.1| putative cytochrome c biogenesis protein [Enterobacter sp. Ag1]
 gi|394729679|gb|EJF29632.1| putative cytochrome c biogenesis protein [Enterobacter sp. Ag1]
          Length = 396

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           T  +P       W+N+ PL     LKGKVV++DFWT+ CINC H LP +     KYKD  
Sbjct: 250 TSAMPPLSGGTAWINSPPLT-PEALKGKVVLIDFWTFDCINCQHALPHVREWANKYKDQG 308

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             V+GVH+ ++  EKDL++++ AV ++ + +PVV D +  +W   G   WP        G
Sbjct: 309 LVVIGVHTPEYPWEKDLDSVKKAVAKWQLPYPVVTDNNYQIWNAFGNQYWPAHYYFDARG 368

Query: 547 KLLAQLAGEGHRKDLDDLVE 566
           +L     GEG+ +  + +++
Sbjct: 369 QLRNVSFGEGNYEQQEQVIQ 388


>gi|299532439|ref|ZP_07045831.1| cytochrome c biogenesis protein [Comamonas testosteroni S44]
 gi|298719677|gb|EFI60642.1| cytochrome c biogenesis protein [Comamonas testosteroni S44]
          Length = 610

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           I P       WLN+ PL   +DL+GKVV++DFWTY CINC+  LP ++   +KY+D    
Sbjct: 294 IAPSLDGATQWLNSKPLS-GQDLRGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLI 352

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVGVH+ +F  E+D+  +  A+   GI++PV  D    +WR      WP    +   G++
Sbjct: 353 VVGVHAPEFAFERDIGNVSKAMKDLGINYPVAVDNQYAIWRAFKNQYWPAHYFIDATGRI 412

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG   + + +++  L
Sbjct: 413 RHHHFGEGGYAESERVIQQLL 433


>gi|239834701|ref|ZP_04683029.1| redoxin domain-containing protein [Ochrobactrum intermedium LMG
           3301]
 gi|239822764|gb|EEQ94333.1| redoxin domain-containing protein [Ochrobactrum intermedium LMG
           3301]
          Length = 655

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+  LP +    +KYKD    V+
Sbjct: 342 PSLDGAVEWLNSPPLT-NEQLRGKVVLVDFWTYSCINCIRTLPYVRAWAEKYKDQGLVVI 400

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ AV  + I +PV  D +  +WR    + WP   ++   G++  
Sbjct: 401 GVHAPEFAFEKKIDNVKKAVADFKIGYPVAIDNNYRIWRAFENSYWPAHYLIDAKGQIRH 460

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG+    +  ++  L
Sbjct: 461 HHFGEGNYSGTEQAIQELL 479


>gi|298682183|gb|ADI95251.1| redoxin-containing protein [Pseudomonas putida DOT-T1E]
          Length = 195

 Score =  108 bits (271), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           ++ R +   +P       WLN+ PL     LKGKVV++DFWT+ CINC   LP +    +
Sbjct: 44  LKARDSYGAMPSLSGASQWLNSPPLD-APGLKGKVVLVDFWTWDCINCRRSLPHVNDWAR 102

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +Y D    VVGVH+ +FD E D+  +R+ V R GI +PV  D D  +W   G   WP   
Sbjct: 103 RYADQGLVVVGVHTPEFDYEHDVATLRDKVARLGIGYPVAVDNDYKVWNAWGNQFWPAHY 162

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            V   G++     GEG   + + +++A L
Sbjct: 163 FVDRKGQVRHVHVGEGDYGEQEQVIQALL 191


>gi|290975887|ref|XP_002670673.1| predicted protein [Naegleria gruberi]
 gi|284084234|gb|EFC37929.1| predicted protein [Naegleria gruberi]
          Length = 1074

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 171/343 (49%), Gaps = 45/343 (13%)

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT 655
            ++ + +P  +A++  N  L  +D+ +NRI      G +I  I  +G    +      AT
Sbjct: 567 ISAKIHYPNGIAMN-SNGELIFTDTRNNRIRKVSTSG-YISTIAGNGTVAYK------AT 618

Query: 656 FNRPQGLAYNAK------------KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           F+   GLA NA+             N +Y+AD+ NH +R++   +  + T+AG GT G  
Sbjct: 619 FSGDNGLAINAQLFVPFAVAVNLTNNDIYIADSGNHRIRKVSSSSGIITTVAGTGTSGFS 678

Query: 704 YQGGEKG--TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG-YER 760
              G+ G  T+  LN P+ +      E +YI+     ++ + +  +G     +G G    
Sbjct: 679 ---GDNGLATNAKLNFPFSISIGNSGE-IYISDQYNQRVRKVA-ANGYISTIAGSGAIGF 733

Query: 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN 820
           N +G ++ +T F  PSG+S + +  ++++ DS +S IR   L +G    +AGG       
Sbjct: 734 NGDGLAATSTCFNYPSGVSSNSN-GDVFIIDSFNSRIRK--LSSGKISTVAGG------- 783

Query: 821 LFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
               GD     +  L      +  +K+G+I++ADS NH+I+K+   +  +ST+AG G AG
Sbjct: 784 ---LGDGSSAVNSYLNSQSFAI-SSKSGEIFIADSNNHRIRKI-ATNGDISTVAGSGVAG 838

Query: 881 FK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           F    G A +A L+ P+ +    NG L I+DTNN+ IR + LN
Sbjct: 839 FSGDGGLATSATLNNPSYVAVNSNGELLISDTNNHRIRKVSLN 881



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 158/340 (46%), Gaps = 24/340 (7%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGS 650
           D    T  L  P  + I    +  F   SNH    +  L   +I  I  +G  G   DGS
Sbjct: 452 DGLAITERLHNPNSIFISSNGDSYFSDSSNHK---IRKLSNGYITTIAGTGTSGYSGDGS 508

Query: 651 -FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK 709
               A  N P+G+  ++   + Y +D+ENH +R+I      + T+AG+G  G    GG  
Sbjct: 509 SATSAKLNNPKGVVVSSSGEI-YFSDSENHRIRKIS-TGGIISTVAGSGESGFSGDGGLA 566

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG---YERNLNGSS 766
             S  ++ P  +      E ++      ++I + ST  G     +G+G   Y+   +G +
Sbjct: 567 -ISAKIHYPNGIAMNSNGELIFTDTR-NNRIRKVST-SGYISTIAGNGTVAYKATFSGDN 623

Query: 767 SL--NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
            L  N     P  ++++    +IY+ADS +  IR ++  +G    +AG           F
Sbjct: 624 GLAINAQLFVPFAVAVNLTNNDIYIADSGNHRIRKVSSSSGIITTVAG------TGTSGF 677

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-D 883
              +G+ +   L  P  +    +G+IY++D YN +++K+  A+  +ST+AG G  GF  D
Sbjct: 678 SGDNGLATNAKLNFPFSISIGNSGEIYISDQYNQRVRKV-AANGYISTIAGSGAIGFNGD 736

Query: 884 G-AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
           G AA +   + P+G+    NG++FI D+ N+ IR L   K
Sbjct: 737 GLAATSTCFNYPSGVSSNSNGDVFIIDSFNSRIRKLSSGK 776



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 138/284 (48%), Gaps = 19/284 (6%)

Query: 642 GEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG 701
           G   + DG   +A    P G+A      +L +ADT N  +R++   +  V T AG GT  
Sbjct: 23  GGSKIGDGMTGNALLRYPYGIALGLNSEIL-IADTFNQRIRKVS--SSDVSTFAGVGT-- 77

Query: 702 SDYQG-GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV-TRAFSGDGYE 759
           S + G G   T   +N P+ V    + E  +IA    H I + ST   + T A +   Y 
Sbjct: 78  SSFSGDGALATQSEINFPYGVIVNSLGE-TFIADTSNHVIRKVSTNGKISTIAGTASSYG 136

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
            + +G  + N     P G++L+    E+ + D+ ++ IR ++   G    +AG       
Sbjct: 137 YSGDGGLATNALLNSPYGLALNSSSGEVIIVDTSNNVIRKVS-SIGNITTIAG------T 189

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
               +   +G  +      P   + + NG+++VADS NH+I+K+   S  V+T+AG G A
Sbjct: 190 GAAGYSGDNGQATNAKFNAPRAAFYS-NGELFVADSRNHRIRKISN-SGIVTTVAGTGTA 247

Query: 880 GFKDGAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           GF   + LA  AQL+ P+GI    NG +FI+D+ NN IR +  N
Sbjct: 248 GFNGDSILAKNAQLNYPSGISVNSNGEIFISDSVNNRIRKILTN 291



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 178/414 (42%), Gaps = 96/414 (23%)

Query: 600  LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
            L  P  +A+++ NN ++I+DS ++RI         I  +  +G  G          F+  
Sbjct: 631  LFVPFAVAVNLTNNDIYIADSGNHRIRKVSSSSGIITTVAGTGTSG----------FSGD 680

Query: 660  QGLAYNAKKNL-----------LYVADTENHALREIDFVNDTVRTLAGNGTKG------- 701
             GLA NAK N            +Y++D  N  +R++   N  + T+AG+G  G       
Sbjct: 681  NGLATNAKLNFPFSISIGNSGEIYISDQYNQRVRKVA-ANGYISTIAGSGAIGFNGDGLA 739

Query: 702  --------------------------------------SDYQGGEKGTSQLLNSPWDVCY 723
                                                  S   GG    S  +NS  +   
Sbjct: 740  ATSTCFNYPSGVSSNSNGDVFIIDSFNSRIRKLSSGKISTVAGGLGDGSSAVNSYLNSQS 799

Query: 724  KPINEK---VYIAMAGQHQI------WEHSTVDGVTRA-FSGDGYERNLNGSSSLNTSFA 773
              I+ K   ++IA +  H+I       + STV G   A FSGDG    L  S++LN    
Sbjct: 800  FAISSKSGEIFIADSNNHRIRKIATNGDISTVAGSGVAGFSGDG---GLATSATLN---- 852

Query: 774  QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
             PS ++++ +  E+ ++D+ +  IR ++L  G    +AG      +    +       S 
Sbjct: 853  NPSYVAVNSN-GELLISDTNNHRIRKVSLN-GIITTIAG------NGTAGYNGEGNNASL 904

Query: 834  VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL--AAQL 891
              L +P G+  +  G +++ADSYNH+I+KL+  +  +ST AG G AG     +L  +AQL
Sbjct: 905  YQLNYPSGLVVSSTGDLFIADSYNHRIRKLN-VNGTISTSAGNGIAGLSGDGSLPTSAQL 963

Query: 892  SEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPE-LQTLELKGVQPPTPKSRS 944
            + P G+  +  G L+I+D +NN IR + L   + E L     +    PTP + S
Sbjct: 964  NFPTGLAVSSVGELYISDDSNNRIRKVSLTCSQGESLVNGLCEQTVTPTPSTSS 1017



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 62/348 (17%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF--DDATFNRPQGLAYNAKKN 669
           N  LF++DS ++RI      G  +  +  +G  G    S    +A  N P G++ N+   
Sbjct: 216 NGELFVADSRNHRIRKISNSG-IVTTVAGTGTAGFNGDSILAKNAQLNYPSGISVNSNGE 274

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           + +++D+ N+ +R+I   N T+ T+AG GT G    GG    +QL   P  +    + E 
Sbjct: 275 I-FISDSVNNRIRKI-LTNGTIITIAGTGTVGLSGDGGLAVNAQLW-LPSGIVVNSVGE- 330

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           ++I+ +  H+I + S   GV   F+G   +  ++  S S    F  P+G   +P      
Sbjct: 331 IFISDSYNHRIRKIS-ASGVISTFAGTSSFGEDVQASKS----FVSPNG---NPIIYGNN 382

Query: 789 VADSESSSIRALNLKTG---------------------------GSRL---------LAG 812
           +  +++  +R ++L T                            GS L         +AG
Sbjct: 383 LLFTDNGKVRRVDLSTNVISTLSSVTPLGSAVSYYNNEVYVMYLGSYLSKIKSSLTAVAG 442

Query: 813 GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVST 872
              I  D        DG+     L +P  ++ + NG  Y +DS NHKI+KL  ++  ++T
Sbjct: 443 TGAIGAD------SGDGLAITERLHNPNSIFISSNGDSYFSDSSNHKIRKL--SNGYITT 494

Query: 873 LAGIGKAGFK-DG-AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           +AG G +G+  DG +A +A+L+ P G++ + +G ++ +D+ N+ IR +
Sbjct: 495 IAGTGTSGYSGDGSSATSAKLNNPKGVVVSSSGEIYFSDSENHRIRKI 542



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 14/119 (11%)

Query: 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
           S L+ GG  I           DGM    LL++P G+    N +I +AD++N +I+K+  +
Sbjct: 18  STLIGGGSKI----------GDGMTGNALLRYPYGIALGLNSEILIADTFNQRIRKV--S 65

Query: 867 SNRVSTLAGIGKAGFKDGAALAAQ--LSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           S+ VST AG+G + F    ALA Q  ++ P G+I    G  FIADT+N++IR +  N +
Sbjct: 66  SSDVSTFAGVGTSSFSGDGALATQSEINFPYGVIVNSLGETFIADTSNHVIRKVSTNGK 124



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 161/355 (45%), Gaps = 52/355 (14%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNF--IVQIGSSGEEGLRDGSFDDATFN 657
           L  P  LA++  +  + I D+++N I      GN   I   G++G  G  +G   +A FN
Sbjct: 149 LNSPYGLALNSSSGEVIIVDTSNNVIRKVSSIGNITTIAGTGAAGYSG-DNGQATNAKFN 207

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            P+   Y+  +  L+VAD+ NH +R+I   +  V T+AG GT G +        +QL N 
Sbjct: 208 APRAAFYSNGE--LFVADSRNHRIRKISN-SGIVTTVAGTGTAGFNGDSILAKNAQL-NY 263

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL--NTSFAQP 775
           P  +     N +++I+ +  ++I +  T +G     +G G    L+G   L  N     P
Sbjct: 264 PSGISVNS-NGEIFISDSVNNRIRKILT-NGTIITIAGTG-TVGLSGDGGLAVNAQLWLP 320

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG------------------GDPIF 817
           SGI ++    EI+++DS +  IR ++  +G     AG                  G+PI 
Sbjct: 321 SGIVVNS-VGEIFISDSYNHRIRKIS-ASGVISTFAGTSSFGEDVQASKSFVSPNGNPII 378

Query: 818 PDNLFKFGD-----RDGMGSEVLLQ----HPLGVYCAK-NGQIYVA--DSYNHKIKKLDP 865
             N   F D     R  + + V+       PLG   +  N ++YV    SY  KIK    
Sbjct: 379 YGNNLLFTDNGKVRRVDLSTNVISTLSSVTPLGSAVSYYNNEVYVMYLGSYLSKIKS--- 435

Query: 866 ASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
               ++ +AG G  G    DG A+  +L  P  I  + NG+ + +D++N+ IR L
Sbjct: 436 ---SLTAVAGTGAIGADSGDGLAITERLHNPNSIFISSNGDSYFSDSSNHKIRKL 487


>gi|170693009|ref|ZP_02884170.1| Redoxin domain protein [Burkholderia graminis C4D1M]
 gi|170142007|gb|EDT10174.1| Redoxin domain protein [Burkholderia graminis C4D1M]
          Length = 633

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     +DWLN+ PL+   DL+GKVV+++FWTY CINC+  LP L+    +Y+D    V
Sbjct: 318 MPSLSGAVDWLNSPPLK-TGDLRGKVVIVNFWTYSCINCLRTLPYLKAWSNRYRDQGLVV 376

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E ++  ++ A     I +P+  D  + +W+      WP F +V   G++ 
Sbjct: 377 IGVHAPEFAFEHNIANVKRAAADLHIDYPIAIDNKLAVWQAFDNQYWPAFYIVDARGEIR 436

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG   + + ++   L   G  KL
Sbjct: 437 YHHFGEGGYDESEAVIRQLLADAGHSKL 464


>gi|367466729|ref|ZP_09466883.1| hypothetical protein PAI11_01550 [Patulibacter sp. I11]
 gi|365818003|gb|EHN12944.1| hypothetical protein PAI11_01550 [Patulibacter sp. I11]
          Length = 577

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 9/159 (5%)

Query: 431 PEFPAKLDWLNTA---PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPF 487
           P+F     W NTA   PL     L+G+VV++DFWTY CINC+  LP LE L+ +Y+    
Sbjct: 274 PDFVGNQRWFNTAGGRPLTLA-GLRGRVVLVDFWTYTCINCLRTLPGLEQLDARYRRAGL 332

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
           T+VGVHS +F  E+    +R A+ R  I +PV  D D+  W   G   WP   ++   G 
Sbjct: 333 TIVGVHSPEFPFERSAGNVRAAIARTRIRYPVAQDNDLATWDAWGNQYWPASYLIDARGH 392

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
           +    AGEG  +  +  V   L   G+ +     P P+S
Sbjct: 393 VRWTHAGEGAEEAKERAVRELLAEAGRAR-----PRPVS 426


>gi|398924151|ref|ZP_10661055.1| cytochrome c biogenesis protein [Pseudomonas sp. GM48]
 gi|398173805|gb|EJM61625.1| cytochrome c biogenesis protein [Pseudomonas sp. GM48]
          Length = 591

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 269 TLPVEGNLPSLDGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKY 327

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 328 RDQGLVVIGVHAPEFAFERDVNNVTKAMKDLGINYPVAIDNEFKIWRAFNNEYWPAHYFA 387

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G  K+ D 
Sbjct: 388 DAQGRIRYHHFGEGEYAESERVIQQLLREAGAAKVADG 425


>gi|389755610|ref|ZP_10191290.1| Redoxin domain-containing protein [Rhodanobacter sp. 115]
 gi|388432217|gb|EIL89232.1| Redoxin domain-containing protein [Rhodanobacter sp. 115]
          Length = 575

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 82/153 (53%), Gaps = 4/153 (2%)

Query: 428 PIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           PI  +FP+      WLN+  L   + L+GKVV++DFWTY CINC+  LP +E    KYKD
Sbjct: 256 PIEGQFPSLAGATGWLNSGALT-PQSLRGKVVLVDFWTYSCINCLRSLPYVEAWYDKYKD 314

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               ++GVHS +F  EKD   +  AV R G+ +PV  D D  +W+      WP    +  
Sbjct: 315 HGLVIIGVHSPEFAFEKDPANVAAAVKRLGVKYPVALDDDYAIWQGFNNEYWPADYFIDA 374

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
           +G++     GEG   + +D++   L   G K L
Sbjct: 375 HGRIRHHYFGEGGYAEGEDMIRRLLTDAGYKNL 407


>gi|389796482|ref|ZP_10199534.1| Redoxin domain-containing protein [Rhodanobacter sp. 116-2]
 gi|388448406|gb|EIM04390.1| Redoxin domain-containing protein [Rhodanobacter sp. 116-2]
          Length = 573

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+GKVV++DFWTY CINC+  LP +     KYKD    V
Sbjct: 259 LPSLAGATQWLNSPPLT-TGSLRGKVVLVDFWTYSCINCIRALPYVRGWADKYKDHGLVV 317

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EKD   +  AV   G+ +PV  D D  +W+      WP    +   G++ 
Sbjct: 318 IGVHAPEFAFEKDPANVTKAVKDLGVDYPVALDNDYAIWKGFDNEYWPAHYFIDAQGQIR 377

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL----LDNTPLPLSLEKDNDPRLFTSPLKFPG- 604
               GEG  ++ +D++   L   G+K L    + +    +     NDP    SP  + G 
Sbjct: 378 HHHFGEGEYRESEDVIRQLLADAGQKNLPGGYVSDDHRGVEAAASNDPT--RSPETYVGY 435

Query: 605 KLAIDILNNRLFISDSNHNRIVVT------DLDGNFIVQ 637
             A++ + NR+   +++      T       LDG + V+
Sbjct: 436 ARAMNFVGNRVARDEAHDYHAPATLAADQWSLDGRWTVR 474


>gi|406937078|gb|EKD70644.1| hypothetical protein ACD_46C00463G0006 [uncultured bacterium]
          Length = 550

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 4/166 (2%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+      W+N+ PL  ++ LKGKVV++DFWTY CINC+  LP L+   +KY D    ++
Sbjct: 250 PDITGITGWINSKPLTMQQ-LKGKVVLIDFWTYSCINCIRTLPYLKDWYQKYHDKGLEII 308

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+HS +F  E++   ++NAV+ + I +PV  D + + WR      WP   ++  +G+++ 
Sbjct: 309 GIHSPEFAFERNYNNVKNAVMSFEIKYPVALDNNFSTWRNFNNLYWPAHYLINQDGQVVY 368

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF 596
           +  GEG     ++ +   L   G  K +   P   ++ +   P ++
Sbjct: 369 RHFGEGEYDVTENNIRFLLGLRGPTKFM---PTVETVSRGQTPEIY 411


>gi|389775492|ref|ZP_10193433.1| Redoxin domain-containing protein [Rhodanobacter spathiphylli B39]
 gi|388437308|gb|EIL94114.1| Redoxin domain-containing protein [Rhodanobacter spathiphylli B39]
          Length = 573

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+APL     L+GKVV++DFWTY CINC+  LP +     KYK+    V
Sbjct: 259 MPSLAGATQWLNSAPLS-TESLRGKVVLVDFWTYSCINCIRSLPYVRGWADKYKNHGLVV 317

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EKD   +  AV   G+ +PV  D D  +W+      WP    +   G++ 
Sbjct: 318 IGVHAPEFAFEKDPANVAKAVQDLGVDYPVALDNDYAIWKGFNNEYWPAHYFIDTQGQIR 377

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG  +  +D++   L   G+K L
Sbjct: 378 HHHFGEGEYRQSEDVIRQLLTEAGQKNL 405


>gi|422321431|ref|ZP_16402478.1| redoxin domain-containing protein [Achromobacter xylosoxidans C54]
 gi|317403717|gb|EFV84203.1| redoxin domain-containing protein [Achromobacter xylosoxidans C54]
          Length = 181

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 1/138 (0%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           EF     WLN+ P      L+GKVV++DFWTY CINC++ LP ++   +KYKD    VVG
Sbjct: 40  EFTGIQTWLNSEPRTLA-SLRGKVVLVDFWTYTCINCINTLPYVKQWHQKYKDQGLVVVG 98

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           VH+ +F  E+  + + +A+ R+GI +PV  D D   W       WP F ++   G ++ +
Sbjct: 99  VHTPEFPFERTTKNVADAIKRFGIEYPVAQDNDYKTWDAYRNQYWPAFYLIDKGGNIVYR 158

Query: 552 LAGEGHRKDLDDLVEAAL 569
             GEG   + +  ++  L
Sbjct: 159 HFGEGRYAETEAEIQRLL 176


>gi|406948693|gb|EKD79352.1| cytochrome c biogenesis protein [uncultured bacterium]
          Length = 296

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+     +WLN+ PL    +LKGKVV++DFWTY CINC+  LP ++   ++Y+D    V+
Sbjct: 9   PDIIGITNWLNSEPLTLD-ELKGKVVLIDFWTYTCINCIRTLPHVQGWYEQYQDDGLMVI 67

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F+ EKD   +++A+  YG+++PV  D D   W+      WP   ++   G +  
Sbjct: 68  GVHSPEFEFEKDTGNVQDAIEMYGLTYPVAQDNDFATWKNYNNRYWPAKYLIDAEGNIRY 127

Query: 551 QLAGEG 556
              GEG
Sbjct: 128 THFGEG 133


>gi|395232316|ref|ZP_10410567.1| Redoxin domain-containing protein [Enterobacter sp. Ag1]
 gi|394733302|gb|EJF32930.1| Redoxin domain-containing protein [Enterobacter sp. Ag1]
          Length = 585

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 1/149 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           ++P       WLN+ PL     LKGKVV++DFWTY CINC+  LP ++   +KY+D    
Sbjct: 270 VMPSLSGATQWLNSPPLT-AESLKGKVVLVDFWTYSCINCLRSLPYVKAWAEKYRDQGLV 328

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVH+ +F  E+D+  +     + G+++P+  D D ++WR      WP    +  +G +
Sbjct: 329 VIGVHAPEFAFERDVNNVTKEAKKLGVTYPIAIDNDYSIWRAFNNQYWPAHYFIDASGHI 388

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
             +  GEG     + +++  L   G K +
Sbjct: 389 RYEHFGEGDYAQSERVIQELLRQAGAKNV 417


>gi|294678774|ref|YP_003579389.1| cytochrome c biogenesis protein transmembrane region [Rhodobacter
           capsulatus SB 1003]
 gi|294477594|gb|ADE86982.1| cytoChrome c biogenesis protein, transmembrane region [Rhodobacter
           capsulatus SB 1003]
          Length = 612

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 3/205 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P+    + WLN+ PL     L+GKVV++DFWTY CINC+  LP ++  +  Y+D    V
Sbjct: 302 MPDLTGAVQWLNSPPLT-AAQLRGKVVLIDFWTYSCINCLRALPHVQAWDAAYRDKGLVV 360

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EK+   +  AV   GI++PV  D D  LWR      WP    +   G++ 
Sbjct: 361 IGVHAPEFAFEKNPANVEKAVRDLGITYPVALDNDYALWRAFSNRYWPAHYFIDAKGQIR 420

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPG-KLAI 608
               GEG   + + ++   L   G             +    D R   SP  + G + A 
Sbjct: 421 HHHFGEGGYAESEQVIRTLLAEAGASPDTTAQVQAAGVSAPADMRAVFSPETYLGHERAS 480

Query: 609 DILNNRLFISDSNHNRIVVTDLDGN 633
             LN    I+D  H R    DL  N
Sbjct: 481 GNLNAEGLIADQPH-RYTAPDLRLN 504


>gi|319791418|ref|YP_004153058.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal
           allergen [Variovorax paradoxus EPS]
 gi|315593881|gb|ADU34947.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Variovorax paradoxus EPS]
          Length = 602

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P      +W+N+ PL     L+GKVV++DFWTY CINC+  LP +    +KYKD    V+
Sbjct: 288 PSLAGATEWINSPPLT-PESLRGKVVLVDFWTYSCINCLRTLPYVRAWAEKYKDAGLVVL 346

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F  EK    +R A    GI  PV  D D  +WR     +WP F  +   G++  
Sbjct: 347 GVHSPEFAFEKRSANVRKATKDLGIEFPVALDNDFKIWRGFDNQAWPAFYFIDAEGRIRH 406

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKL 577
              GE      + +++  L   G++ L
Sbjct: 407 HQFGENRYDKAEQILQQLLAEAGQRNL 433


>gi|421521883|ref|ZP_15968534.1| redoxin domain-containing protein [Pseudomonas putida LS46]
 gi|402754491|gb|EJX14974.1| redoxin domain-containing protein [Pseudomonas putida LS46]
          Length = 171

 Score =  108 bits (269), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           ++ R +   +P       WLN+ P+     LKGKVV++DFWT+ CINC   LP +    +
Sbjct: 20  LKARDSYGAMPSLSGASQWLNSPPVD-APGLKGKVVLVDFWTWDCINCRRSLPHVNDWAR 78

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +Y D    VVGVH+ +FD E D+  +R+ V R GI +PV  D D  +W   G   WP   
Sbjct: 79  RYADQGLVVVGVHTPEFDYEHDVATLRDKVARLGIGYPVAVDNDYKVWNAWGNQFWPAHY 138

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            V   G++     GEG   + + +++A L
Sbjct: 139 FVDRKGQVRHVHVGEGDYGEQEQVIQALL 167


>gi|352081801|ref|ZP_08952643.1| Redoxin domain protein [Rhodanobacter sp. 2APBS1]
 gi|351682707|gb|EHA65803.1| Redoxin domain protein [Rhodanobacter sp. 2APBS1]
          Length = 573

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+GKVV++DFWTY CINC+  LP +     KYKD    V
Sbjct: 259 LPSLAGATQWLNSPPLT-TEALRGKVVLVDFWTYSCINCIRALPYVRGWADKYKDHGLVV 317

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EKD   +  AV   G+ +PV  D D  +W+      WP    +   G++ 
Sbjct: 318 IGVHAPEFAFEKDPANVTKAVKDLGVDYPVALDNDYAIWKGFDNEYWPAHYFIDAQGQIR 377

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG  ++ +D++   L   G+K L
Sbjct: 378 HHHFGEGEYRESEDVIRQLLADAGQKNL 405


>gi|163849958|ref|YP_001638001.1| cytochrome c biogenesis protein transmembrane protein
           [Methylobacterium extorquens PA1]
 gi|163661563|gb|ABY28930.1| cytochrome c biogenesis protein transmembrane region
           [Methylobacterium extorquens PA1]
          Length = 576

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 10/139 (7%)

Query: 424 RKTTPI---VPEFPAKLDWLNTAPL---QFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
           R + P+   +P       WLN  P    QFR    GKV+++  WTY CINC+  LP +  
Sbjct: 253 RSSLPVERRLPSLQGASHWLNAGPPTNEQFR----GKVLLVHVWTYSCINCIRTLPYIRA 308

Query: 478 LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
            E +Y+D    V+GVH+ +F  E+D++ +R+AV R+ + +P+  D D  +WR L   SWP
Sbjct: 309 WEVRYRDQGLAVIGVHAPEFAFERDIDNVRSAVRRFALPYPIAVDNDFRIWRALRNTSWP 368

Query: 538 TFAVVGPNGKLLAQLAGEG 556
              +V   G++     GEG
Sbjct: 369 ALYIVDAEGRIRHHQFGEG 387


>gi|148548498|ref|YP_001268600.1| redoxin domain-containing protein [Pseudomonas putida F1]
 gi|148512556|gb|ABQ79416.1| Redoxin domain protein [Pseudomonas putida F1]
          Length = 178

 Score =  108 bits (269), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 1/149 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           ++ R +   +P       WLN+ P+     LKGKVV++DFWT+ CINC   LP +    +
Sbjct: 27  LKARDSYGAMPSLSGASQWLNSPPVD-APGLKGKVVLVDFWTWDCINCRRSLPHVNDWAR 85

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +Y D    VVGVH+ +FD E D++ +R+ + R GI +PV  D D  +W   G   WP   
Sbjct: 86  RYADQGLVVVGVHTPEFDYEHDVDTLRDKLARLGIGYPVAVDNDYKVWNAWGNQFWPAHY 145

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            V   G++     GEG   + + +++A L
Sbjct: 146 FVDRKGQVRHVHVGEGDYGEQEQVIQALL 174


>gi|398802738|ref|ZP_10561941.1| cytochrome c biogenesis protein [Polaromonas sp. CF318]
 gi|398098976|gb|EJL89249.1| cytochrome c biogenesis protein [Polaromonas sp. CF318]
          Length = 628

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W+NTAPL    DL+GKVV++DFWTY CINC+  LP +     KY++    V+GVHS +F 
Sbjct: 322 WVNTAPLA-GADLRGKVVLVDFWTYSCINCLRTLPYIRAWADKYREAGLVVLGVHSPEFA 380

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            EK+   +R AV   G+++PV  D    +WR     +WP    V   G++   + GEG  
Sbjct: 381 FEKNESNVRRAVKDLGLAYPVAIDSRHAIWRGFENQAWPALYFVDAQGRVRHHVFGEGQY 440

Query: 559 KDLDDLVEAAL 569
           +  + L++  L
Sbjct: 441 EASERLIQKLL 451


>gi|424895340|ref|ZP_18318914.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
           trifolii WSM2297]
 gi|393179567|gb|EJC79606.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
           trifolii WSM2297]
          Length = 608

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P ++   +KY D    V+
Sbjct: 295 PSLDGAVEWLNSKPLTTEQ-LRGKVVLVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVI 353

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 354 GVHAPEFAFEKKVDNVRKAVGDFQIGYPVAIDNDYKIWRAFENSYWPAAYLIDTEGQIRY 413

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 414 HHFGEGNYGRTEKAIQDLLREA 435


>gi|290977429|ref|XP_002671440.1| predicted protein [Naegleria gruberi]
 gi|284085009|gb|EFC38696.1| predicted protein [Naegleria gruberi]
          Length = 1494

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 183/435 (42%), Gaps = 67/435 (15%)

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD---GSFD 652
            ++ L FP  LAI   NN L+ISDS++ RI   DL  N I  +   G +       G   
Sbjct: 320 ISASLSFPFGLAI--YNNSLYISDSSNYRIRKIDLTSNIISTVAGDGSKQYSARYPGYIL 377

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALRE---IDFVNDTVRTLAGNGTKGSDYQGGEK 709
           D     P    YN++ + L + D  N  LR     ++ N  + ++AGNG    D  G + 
Sbjct: 378 DVPLASPLSTFYNSQTDELLMVD-NNRVLRLNSLTNYKNSLIESIAGNGVLAVDVDG-KL 435

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQ-------HQIWEHSTVDGVTRAFSGDGYERNL 762
           G    LNS   V        +YI   G        +Q+   ST+ G    ++GDG     
Sbjct: 436 GNQTSLNSACSVFQSEATGDIYIGTVGSVLKLSKSNQLV--STIAGTISKYTGDG----- 488

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
             SS++      P+G+++SP+  E+Y++DS +  IR ++   G    + G    F     
Sbjct: 489 --SSAIQAQLNGPTGVAISPN-GEVYISDSSNDVIRKIDTN-GAISTVVGSSSGF----- 539

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
                D       L +P+G+    NG + ++D+ N++I+K   +S  V+T+AG G   + 
Sbjct: 540 ----LDASARRAQLANPMGIAFLPNGDLIISDAKNNRIRKFSISSGNVTTIAGTGLTTYN 595

Query: 883 -DG-AALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLD-------------------- 919
            +G   +A  ++ P GI + + N  +F ADT N  IR +D                    
Sbjct: 596 GEGLVGVATNINYPTGICVNSSNSEIFFADTFNYRIRKIDSTGTIRTVVGTGSSSYTADG 655

Query: 920 LNKEEPELQTLELKGVQPPTPK--SRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISL 977
            N     +  + L+ + P T +        +RR  S D +   V GG    GN Y  +SL
Sbjct: 656 QNGTSTSVSAVGLQ-IHPITRELYYSDGAFIRRVDSKDGKIYTVIGG----GNTYSALSL 710

Query: 978 PEEYHFSKEARSKFS 992
               +        FS
Sbjct: 711 ANSTYLGIVRNFTFS 725



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 20/300 (6%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           N  ++ISDS+++ I   D +G     +GSS   G  D S   A    P G+A+    +L+
Sbjct: 507 NGEVYISDSSNDVIRKIDTNGAISTVVGSS--SGFLDASARRAQLANPMGIAFLPNGDLI 564

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYKPINEKV 730
            ++D +N+ +R+    +  V T+AG G   + Y G G  G +  +N P  +C    N ++
Sbjct: 565 -ISDAKNNRIRKFSISSGNVTTIAGTGL--TTYNGEGLVGVATNINYPTGICVNSSNSEI 621

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           + A    ++I +  +  G  R   G G      +G +  +TS +   G+ + P   E+Y 
Sbjct: 622 FFADTFNYRIRKIDST-GTIRTVVGTGSSSYTADGQNGTSTSVSAV-GLQIHPITRELYY 679

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
           +D   + IR ++ K G    + GG   +            + +   L        + NG 
Sbjct: 680 SDG--AFIRRVDSKDGKIYTVIGGGNTYS--------ALSLANSTYLGIVRNFTFSPNGD 729

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGAALAAQLSEPAGIIEAQNGNLFIA 908
           IYV+    + IKK+D  SN V  + G G      DG AL+  LS P G+    NG L  A
Sbjct: 730 IYVSCPSFNVIKKMDYGSNIVYNVVGTGSTVLTGDGPALSTYLSNPGGLAVNTNGELIFA 789



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 148/318 (46%), Gaps = 35/318 (11%)

Query: 612 NNRLFISDSNHNRIV-----VTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA-YN 665
           N  +++S S  N+I+     +  +  N +   G SG+     G+   A+ + P GLA YN
Sbjct: 279 NGDMYVSISTANQIIKVVNGIATVIANSLSTNGFSGD----GGNAISASLSFPFGLAIYN 334

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG--TSQLLNSPWDVCY 723
              N LY++D+ N+ +R+ID  ++ + T+AG+G+K   Y     G      L SP    Y
Sbjct: 335 ---NSLYISDSSNYRIRKIDLTSNIISTVAGDGSK--QYSARYPGYILDVPLASPLSTFY 389

Query: 724 KPINEKVYIAMAGQHQIWEHSTV----DGVTRAFSGDGY-ERNLNGSSSLNTSFAQPSGI 778
               ++  + M   +++   +++    + +  + +G+G    +++G     TS      +
Sbjct: 390 NSQTDE--LLMVDNNRVLRLNSLTNYKNSLIESIAGNGVLAVDVDGKLGNQTSLNSACSV 447

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
             S    +IY+    S       LK   S  L          + K+        +  L  
Sbjct: 448 FQSEATGDIYIGTVGSV------LKLSKSNQLV---STIAGTISKYTGDGSSAIQAQLNG 498

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGII 898
           P GV  + NG++Y++DS N  I+K+D  +  +ST+ G   +GF D +A  AQL+ P GI 
Sbjct: 499 PTGVAISPNGEVYISDSSNDVIRKID-TNGAISTVVG-SSSGFLDASARRAQLANPMGIA 556

Query: 899 EAQNGNLFIADTNNNIIR 916
              NG+L I+D  NN IR
Sbjct: 557 FLPNGDLIISDAKNNRIR 574



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 53/328 (16%)

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR-----TLAGNGTKGSDYQ 705
           F + + + P G A N+K ++ ++ D+  + ++++ F N T+      T+AG    GS   
Sbjct: 109 FANDSLSLPYGAALNSKGDV-FIVDSSQNRVKKV-FYNSTINAFNMITVAG---GGSSLA 163

Query: 706 GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN-LNG 764
            G    S    +P  +   P +++VY+  A  + I +   V+       G G + N ++G
Sbjct: 164 SGIPALSATFTAPRCIAVSP-DDEVYVCDAFNYLIKK--IVNDTIYNVIGTGIKGNSVDG 220

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVAD------------------SESSSIRALNLKTGG 806
           + + NT  + PS I+  P   E++ +D                  +  +S R +   + G
Sbjct: 221 TLANNTKISSPSSIAFHPITKELFYSDLLANVIRYIARNGSVYTYASITSPRTIVFNSNG 280

Query: 807 S------------RLLAGGDPIFPDNLFK--FGDRDGMGSEVLLQHPLGVYCAKNGQIYV 852
                        +++ G   +  ++L    F    G      L  P G+    N  +Y+
Sbjct: 281 DMYVSISTANQIIKVVNGIATVIANSLSTNGFSGDGGNAISASLSFPFGL-AIYNNSLYI 339

Query: 853 ADSYNHKIKKLDPASNRVSTLAGIGKAGFKD---GAALAAQLSEP-AGIIEAQNGNLFIA 908
           +DS N++I+K+D  SN +ST+AG G   +     G  L   L+ P +    +Q   L + 
Sbjct: 340 SDSSNYRIRKIDLTSNIISTVAGDGSKQYSARYPGYILDVPLASPLSTFYNSQTDELLMV 399

Query: 909 DTNNNIIRYLDL-NKEEPELQTLELKGV 935
           D NN ++R   L N +   ++++   GV
Sbjct: 400 D-NNRVLRLNSLTNYKNSLIESIAGNGV 426



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 142/327 (43%), Gaps = 27/327 (8%)

Query: 671  LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
            +YV+    + ++++D+ ++ V  + G G+  +   G     S  L++P  +      E +
Sbjct: 730  IYVSCPSFNVIKKMDYGSNIVYNVVGTGS--TVLTGDGPALSTYLSNPGGLAVNTNGELI 787

Query: 731  YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
            + A +G         + G   A    G     +G  ++  +  + S IS++    +IY++
Sbjct: 788  FAASSGLSNYDGIKKLSGGMVATIAGGIG---DGGLAIRANIGKVSAISVTD--TDIYLS 842

Query: 791  DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI 850
            D  ++ IR ++L TG    + G         +   + D + ++  +     V  +  G+I
Sbjct: 843  DQGNNRIRKISLSTGIISSVVGA-------FYSTDNGDNLANQTNINLVNDVRIST-GEI 894

Query: 851  YVADSYNHKIKKLD-PASNRVSTLAGIGKAGF---KDGAALAAQLSEPAGIIEAQNGNLF 906
               DS ++KI+K D     +V T+AG G +     ++  A  A L+ P  I     G L 
Sbjct: 895  VFTDSGHNKIRKTDLSGRGKVITIAGNGSSQAIVSENVLASEAYLNNPGSIGYLSTGELI 954

Query: 907  IADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGL- 965
            I DT NN+IR + LN     +  +  +  Q       S  +    S+P   +I+ DG + 
Sbjct: 955  ITDTGNNVIRKVGLNG---NISLIAGQYFQSGFNGDSSNAKSSLLSNPKGLSILNDGRIV 1011

Query: 966  -SNEGNIYLKI---SLPEEYHFSKEAR 988
              + GN  +++     P+ Y+ ++ + 
Sbjct: 1012 FVDSGNFRVRMLTPYCPQGYYLTQNSN 1038



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 134/322 (41%), Gaps = 40/322 (12%)

Query: 612  NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFDDATFNRPQGLAYNAKKNL 670
            N  +++S  + N I   D   N +  +  +G   L  DG       + P GLA N    L
Sbjct: 727  NGDIYVSCPSFNVIKKMDYGSNIVYNVVGTGSTVLTGDGPALSTYLSNPGGLAVNTNGEL 786

Query: 671  LYVADT--ENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYKPIN 727
            ++ A +   N+         D ++ L+G G   +   G G+ G +   N          +
Sbjct: 787  IFAASSGLSNY---------DGIKKLSG-GMVATIAGGIGDGGLAIRANIGKVSAISVTD 836

Query: 728  EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM-- 785
              +Y++  G ++I + S   G+  +  G  Y  + NG +      A  + I+L  D    
Sbjct: 837  TDIYLSDQGNNRIRKISLSTGIISSVVGAFYSTD-NGDN-----LANQTNINLVNDVRIS 890

Query: 786  --EIYVADSESSSIRALNLKTGGSRLLAGGD----PIFPDNLFKFGDRDGMGSEVLLQHP 839
              EI   DS  + IR  +L   G  +   G+     I  +N+        + SE  L +P
Sbjct: 891  TGEIVFTDSGHNKIRKTDLSGRGKVITIAGNGSSQAIVSENV--------LASEAYLNNP 942

Query: 840  LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGA--ALAAQLSEPAG 896
              +     G++ + D+ N+ I+K+    N +S +AG   ++GF   +  A ++ LS P G
Sbjct: 943  GSIGYLSTGELIITDTGNNVIRKVGLNGN-ISLIAGQYFQSGFNGDSSNAKSSLLSNPKG 1001

Query: 897  IIEAQNGNLFIADTNNNIIRYL 918
            +    +G +   D+ N  +R L
Sbjct: 1002 LSILNDGRIVFVDSGNFRVRML 1023



 Score = 39.7 bits (91), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 36/212 (16%)

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL---NTSFAQPSGISLSPD 783
           N  +Y A     Q+    T +G++  F+G    +  + S SL   N S + P G +L+  
Sbjct: 67  NGNIYYADGLNSQVRYFDT-NGISHLFAGSPAYQYGSPSDSLGFANDSLSLPYGAALNSK 125

Query: 784 FMEIYVADSE---------SSSIRALNLKT--GGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
             ++++ DS          +S+I A N+ T  GG   LA G P                 
Sbjct: 126 -GDVFIVDSSQNRVKKVFYNSTINAFNMITVAGGGSSLASGIPAL--------------- 169

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQ 890
                 P  +  + + ++YV D++N+ IKK+   ++ +  + G G  G      LA   +
Sbjct: 170 SATFTAPRCIAVSPDDEVYVCDAFNYLIKKI--VNDTIYNVIGTGIKGNSVDGTLANNTK 227

Query: 891 LSEPAGI-IEAQNGNLFIADTNNNIIRYLDLN 921
           +S P+ I        LF +D   N+IRY+  N
Sbjct: 228 ISSPSSIAFHPITKELFYSDLLANVIRYIARN 259


>gi|423013220|ref|ZP_17003941.1| Redoxin domain-containing protein [Achromobacter xylosoxidans
           AXX-A]
 gi|338783847|gb|EGP48201.1| Redoxin domain-containing protein [Achromobacter xylosoxidans
           AXX-A]
          Length = 181

 Score =  107 bits (268), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           EF     WLN+ PL     L+GKVV++DFWTY CINC++ LP ++   +KYKD    VVG
Sbjct: 40  EFTGIQTWLNSEPLTLA-SLRGKVVLVDFWTYTCINCINTLPYVKQWNQKYKDQGLVVVG 98

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           VH+ +F  E+  + + +A+ R+GI +PV  D     W       WP F ++   G ++ +
Sbjct: 99  VHTPEFPFERTTKNVADAIKRFGIEYPVAQDNQYKTWDAYRNQYWPAFYLIDKGGNIVYR 158

Query: 552 LAGEG 556
             GEG
Sbjct: 159 HFGEG 163


>gi|388457219|ref|ZP_10139514.1| cytochrome C biogenesis protein [Fluoribacter dumoffii Tex-KL]
          Length = 547

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W+N+ PL    DL GKV+++DFWTY CINC+  LP ++    +Y +    ++G+H+ +FD
Sbjct: 258 WINSPPLDLS-DLHGKVILIDFWTYSCINCLRTLPYIKDWYSRYHEKGLVIIGIHTPEFD 316

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            EK+LE +R AV +YGI +PV  D     WR    + WP   ++   G ++ +  GEG  
Sbjct: 317 FEKNLEHVRAAVKQYGILYPVALDNQFVTWRNYHNHFWPAHFLINKKGYVVYKHFGEGEY 376

Query: 559 KDLDDLVEAAL 569
             +++ +   L
Sbjct: 377 DVMENNIRFLL 387


>gi|388544267|ref|ZP_10147555.1| Redoxin domain-containing protein [Pseudomonas sp. M47T1]
 gi|388277450|gb|EIK97024.1| Redoxin domain-containing protein [Pseudomonas sp. M47T1]
          Length = 580

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + W+N+ PL     LKGKVV++DFWTY CINC+  LP L+    KY D    V
Sbjct: 265 LPSLDGAVQWINSPPLT-AESLKGKVVLVDFWTYSCINCLRTLPYLKAWAAKYHDQGLVV 323

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +  A+ + GI++PV  D D  +WR      WP    V   G + 
Sbjct: 324 IGVHAPEFAFERDVGNVTAAMKKLGITYPVAIDNDYKIWRAFDNEYWPAHYFVDAQGHIR 383

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 384 YHHFGEGEYDQSERVIQQLL 403


>gi|190892102|ref|YP_001978644.1| cytochrome c biogenesis protein [Rhizobium etli CIAT 652]
 gi|190697381|gb|ACE91466.1| putative cytochrome c biogenesis protein [Rhizobium etli CIAT 652]
          Length = 645

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P +    +KY D    V+
Sbjct: 332 PSLDGAVEWLNSKPLT-TEQLRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVI 390

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R A+  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 391 GVHAPEFAFEKKIDNVRKALSDFQIRYPVAIDNDYKIWRAFENSYWPAAYLIDAKGQIRY 450

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL++ A
Sbjct: 451 HHFGEGNYGRTEKAIQDLLQEA 472


>gi|241661929|ref|YP_002980289.1| cytochrome C biogenesis protein transmembrane region [Ralstonia
           pickettii 12D]
 gi|240863956|gb|ACS61617.1| cytochrome c biogenesis protein transmembrane region [Ralstonia
           pickettii 12D]
          Length = 466

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 8/166 (4%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P     +DWLN+ PL     L+GKVV+++FWT+ CINC +VLP +   ++KYKD    
Sbjct: 287 LFPPLTGAVDWLNSPPLTVE-ALRGKVVLVNFWTFGCINCRNVLPYVREWDRKYKDQGLV 345

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VV VH+ +F  EK++E ++ A    G + P+  D    +W+    N WP    +   G++
Sbjct: 346 VVSVHAPEFAYEKNIENVKRAASELGATFPIAIDNRFEIWKAFNNNYWPANYFIDSQGRI 405

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL---SLEKDN 591
                GEG  +  +  ++  L    K+  + N P+P+   +LEK N
Sbjct: 406 RFHHFGEGEYEKSERAIQQLL----KEARVGNRPVPMTATTLEKLN 447


>gi|73537742|ref|YP_298109.1| cytochrome c biogenesis protein, transmembrane region [Ralstonia
           eutropha JMP134]
 gi|72121079|gb|AAZ63265.1| Cytochrome c biogenesis protein, transmembrane region [Ralstonia
           eutropha JMP134]
          Length = 598

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 1/166 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL  R  L+GKV ++ FWTY CINC+  LP L     KYKD   TV
Sbjct: 284 LPALDGAVQWLNSPPLS-REQLQGKVTLVYFWTYSCINCIRTLPYLRAWADKYKDQGLTV 342

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E+  + +R AV  + I  PV  D D  +WR    + WP    V   G + 
Sbjct: 343 VGVHTPEFAFERSTDNVRRAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGNIR 402

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRL 595
               GEG     + +++  L   G + +  +   P +      P L
Sbjct: 403 HHQFGEGDYAKSERVIQTLLTEAGSRAVAGDVVSPDAAGAQAAPDL 448


>gi|167590449|ref|ZP_02382837.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           ubonensis Bu]
          Length = 335

 Score =  107 bits (268), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP +    +KY      V
Sbjct: 17  LPPLDGAVQWLNSPPLT-TAGLRGKVVLVDFWTYSCINCLRTLPYINAWARKYAPYGLVV 75

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +R AV   GI +PV  D +  +WR  G   WP    V   G++ 
Sbjct: 76  IGVHAPEFAFERDIGNVRKAVHDLGIGYPVAIDNNYAIWRAFGNEYWPAHYFVDAQGRIR 135

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLL 578
               GEG   + +  ++A L   G+   L
Sbjct: 136 RHHFGEGDYAESERAIQALLAEAGRPDAL 164


>gi|160898510|ref|YP_001564092.1| alkyl hydroperoxide reductase [Delftia acidovorans SPH-1]
 gi|160364094|gb|ABX35707.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Delftia acidovorans SPH-1]
          Length = 609

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P       WLN+ PL   + L+GKVV++DFWTY CINC+  LP ++   +KY+D    
Sbjct: 293 LAPALDGATGWLNSTPLTAEQ-LRGKVVLVDFWTYSCINCLRTLPYVKAWAEKYRDQGLV 351

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVGVH+ +F  E+ L  +  A+   GI +PV  D    +WR      WP    +   G++
Sbjct: 352 VVGVHAPEFAFERKLSNVEKAIKDLGIGYPVAVDNGYKIWRAFNNQYWPAHYFIDAQGRI 411

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
                GEG   + + +++  L   G K++
Sbjct: 412 RHHHFGEGGYAESERVIQQLLQEAGSKQV 440


>gi|398911455|ref|ZP_10655498.1| cytochrome c biogenesis protein [Pseudomonas sp. GM49]
 gi|398184012|gb|EJM71474.1| cytochrome c biogenesis protein [Pseudomonas sp. GM49]
          Length = 591

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY+D    V
Sbjct: 276 LPPLDGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKYRDQGLVV 334

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  +  A+   GI++PV  D +  +WR      WP        G++ 
Sbjct: 335 IGVHAPEFAFERDVNNVTKAMKDLGINYPVAIDNEFKIWRAFNNEYWPAHYFADAQGRIR 394

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
               GEG   + + +++  L   G  K+ D 
Sbjct: 395 YHHFGEGAYAESERVIQQLLREAGAAKVADG 425


>gi|386012806|ref|YP_005931083.1| Redoxin domain-containing protein [Pseudomonas putida BIRD-1]
 gi|313499512|gb|ADR60878.1| Redoxin domain protein [Pseudomonas putida BIRD-1]
          Length = 171

 Score =  107 bits (267), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           ++ R +   +P       WLN+ PL     LKGKVV++DFWT+ CINC   LP +    +
Sbjct: 20  LKARDSYGAMPSLSGASQWLNSPPLD-APGLKGKVVLVDFWTWDCINCRRSLPHVNDWAR 78

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +Y D    VVGVH+ +FD E D+  +R+ V R GI +PV  D D  +W   G   WP   
Sbjct: 79  RYADQGLVVVGVHTPEFDYEHDVATLRDKVARLGIGYPVAVDNDYKVWNAWGNQFWPAHY 138

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            V   G++     GEG     + +++A L
Sbjct: 139 FVDRKGQVRHVHFGEGDYGGQEQVIQALL 167


>gi|26989128|ref|NP_744553.1| redoxin domain-containing protein [Pseudomonas putida KT2440]
 gi|24983962|gb|AAN68017.1|AE016434_8 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 178

 Score =  107 bits (267), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           ++ R +   +P       WLN+ PL     LKGKVV++DFWT+ CINC   LP +    +
Sbjct: 27  LKARDSYGAMPSLAGASQWLNSPPLD-APGLKGKVVLVDFWTWDCINCRRSLPHVNDWAR 85

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +Y D    VVGVH+ +FD E D+  +R+ V R GI +PV  D D  +W   G   WP   
Sbjct: 86  RYADQGLVVVGVHTPEFDYEHDVATLRDKVARLGIGYPVAVDNDYKVWNAWGNQFWPAHY 145

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            V   G++     GEG     + +++A L
Sbjct: 146 FVDRKGQVRHVHFGEGDYGGQEQVIQALL 174


>gi|413961864|ref|ZP_11401092.1| Redoxin domain-containing protein [Burkholderia sp. SJ98]
 gi|413930736|gb|EKS70023.1| Redoxin domain-containing protein [Burkholderia sp. SJ98]
          Length = 179

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 1/128 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + PEF     W+N+ PL   + L+GKVV++DFWT+ C NC++ LP ++   +KYKD    
Sbjct: 37  VAPEFAGIDKWINSEPLSLAQ-LRGKVVLVDFWTFACGNCLNTLPAVKSWNQKYKDKGLV 95

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVGVH+ +F  E+D   ++ A+ R GI++PV  D     W   G   WP F ++  +G++
Sbjct: 96  VVGVHTPEFPFERDTNNVKRAIERNGITYPVALDNRYATWAAYGNQYWPAFYLIDKHGRV 155

Query: 549 LAQLAGEG 556
                GEG
Sbjct: 156 AYTHFGEG 163


>gi|417108485|ref|ZP_11962861.1| putative cytochrome c biogenesis protein [Rhizobium etli CNPAF512]
 gi|327189345|gb|EGE56513.1| putative cytochrome c biogenesis protein [Rhizobium etli CNPAF512]
          Length = 645

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL  +  L+GKVV++DFWTY CINC+  +P +    +KY D    V+
Sbjct: 332 PSLDGAVEWLNSKPLT-KEQLQGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVI 390

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R A+  + I + V  D D  +WR    + WP   ++  NG++  
Sbjct: 391 GVHAPEFAFEKKIDNVRKALSDFQIGYSVAIDNDYKIWRAFENSYWPAAYLIDANGQIRY 450

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 451 HHFGEGNYGRTEKAIQDLLHEA 472


>gi|402488038|ref|ZP_10834853.1| transmembrane thioredoxin/DipZ protein [Rhizobium sp. CCGE 510]
 gi|401813206|gb|EJT05553.1| transmembrane thioredoxin/DipZ protein [Rhizobium sp. CCGE 510]
          Length = 591

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P F   ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P +    +KY D    V+
Sbjct: 278 PSFGGAVEWLNSEPLTTEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVI 336

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK  + ++ AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 337 GVHAPEFAFEKKTDNVKKAVGDFKIGYPVAIDNDYKIWRAFENSYWPAAYLIDAKGQIRY 396

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 397 HHFGEGNYGGTEKAIQDLLREA 418


>gi|339327936|ref|YP_004687628.1| cytochrome c biogenesis protein CcdA [Cupriavidus necator N-1]
 gi|338170537|gb|AEI81590.1| cytochrome c biogenesis protein CcdA [Cupriavidus necator N-1]
          Length = 610

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P     ++WLN+ PL     L+GKVV++DFWTY CINC+  LP ++    KYKD    
Sbjct: 287 LFPGLNGAVEWLNSPPLT-AEGLRGKVVLVDFWTYSCINCLRTLPYVKAWANKYKDEGLV 345

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVH+ +F  E++++ ++ A    G+++PV  D +  +WR  G   WP    +   G++
Sbjct: 346 VIGVHAPEFAFERNIDNVKRASRELGVTYPVAIDNNFAIWRAFGNQYWPAHYFIDAQGRI 405

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG  +  + ++   L
Sbjct: 406 RFHHFGEGEYEHSEAVIRQLL 426


>gi|78059783|ref|YP_366358.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           sp. 383]
 gi|77964333|gb|ABB05714.1| Cytochrome c biogenesis protein, transmembrane region [Burkholderia
           sp. 383]
          Length = 623

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 2/156 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 305 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWARKYAPYGLVV 363

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D   ++WR  G   WP    +   G++ 
Sbjct: 364 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYSIWRAFGNEYWPAHYFIDAQGRIR 423

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
               GEG     +  +++ L   G  + L N PL L
Sbjct: 424 HHHFGEGEYAQSERAIQSLLAEAGHPEAL-NVPLGL 458


>gi|406996144|gb|EKE14612.1| cytochrome c biogenesis protein, transmembrane region [uncultured
           bacterium]
          Length = 372

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 1/166 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE      W N+ PL    +L+GKVV++DFWTY CINC   LP L+   KKYKD    ++
Sbjct: 73  PEIITGGVWFNSKPLTLS-ELRGKVVIIDFWTYSCINCQRTLPYLKNWNKKYKDKGLVII 131

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F+ EK  + +  A+  + +++PVV D D  +WR      WP    +   G +  
Sbjct: 132 GVHAPEFEFEKSEKNVAQAIKDFDLTYPVVQDNDFAIWRAYDNLYWPAKYFIDKEGYIRY 191

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLF 596
              GEG   + + +++  L+  G   +  N   P      N P ++
Sbjct: 192 SHFGEGEYDEGEKVIQELLMEAGATDVSSNINNPTYQINANTPEIY 237


>gi|290982352|ref|XP_002673894.1| predicted protein [Naegleria gruberi]
 gi|284087481|gb|EFC41150.1| predicted protein [Naegleria gruberi]
          Length = 2807

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 163/328 (49%), Gaps = 30/328 (9%)

Query: 597  TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF--DDA 654
            ++ L +P  +A+  +   ++I D+N+ RI   +  G +I  I  +G  G    S     A
Sbjct: 704  SAQLNYPFSVAVSSVG-EIYIVDTNNYRIRKINTSG-YISTIAGTGTGGYNGDSILATSA 761

Query: 655  TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
              N P GL  ++   ++ VAD  NH +R+I+  +  + T+AG       +  G+  T+  
Sbjct: 762  QLNYPYGLTISSTSEII-VADYYNHRIRKIN-TSGYISTIAG------GFGDGDMATTSF 813

Query: 715  LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL--NTSF 772
            + S +   +  +N ++ IA +  H+I + +T+ G     SG G     NG   L  N+  
Sbjct: 814  I-SAYSFEF-TLNGEIIIADSNNHRIRKITTL-GYISTISGTG-TAGYNGDEILATNSQL 869

Query: 773  AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG-MG 831
              P+GI+LS +  EIY+AD+ +  IR +N     S +   G   +        + DG + 
Sbjct: 870  NNPNGIALSSN-SEIYIADTNNHRIRKVNASGYISTIAGTGTGGY--------NGDGVLA 920

Query: 832  SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA-ALAAQ 890
            +   L +P G+   +NG+I +AD+ NH+I+K+   +  +ST+AG G  GF D   A +AQ
Sbjct: 921  TSAQLNYPNGIAIQENGEILIADNNNHRIRKI-RTNGYISTIAGSGIGGFTDNTVATSAQ 979

Query: 891  LSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            L  P G+    N  +F+ D+ N  IR L
Sbjct: 980  LENPLGVAIGSNKEIFLTDSTNKRIRKL 1007



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 158/323 (48%), Gaps = 18/323 (5%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFD-DATFN 657
           L  P  +AI  +   + I+DSN+NRI     +G +I  I  +G      DG    +A  N
Sbjct: 50  LAIPAGVAISSIG-EIIIADSNNNRIRKISTNG-YISTIAGTGSASFGGDGGLAINAQLN 107

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            P  ++ ++  ++ Y++DT N  +R+I   N  + T+AG+GT G    GG   ++QL   
Sbjct: 108 SPSAVSISSNGDM-YISDTGNQRIRKIS-TNGYISTIAGSGTGGYSGDGGLATSAQLY-Y 164

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           P  V   P NE +YIA    H+I + +T   ++            +G  + +     P  
Sbjct: 165 PKGVAISPSNE-IYIADTYNHRIRKVNTNGYISTVAGSGTGGYGGDGGLATSAQVNYPFS 223

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           +S+S    EIY+AD  +  IR +      S +   G   +       GD  G+ +   L 
Sbjct: 224 VSISST-GEIYIADYYNQRIRKVTTYGFISTVAGSGTAGYS------GD-GGLATSAQLY 275

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA-ALAAQLSEPAG 896
           +PLGV  +  G+IY+AD YNH+I+K+   S  +ST+AG       DG  A +AQL  P G
Sbjct: 276 YPLGVSISSAGEIYIADYYNHRIRKV-TTSGYISTIAGTTYGFSGDGGLATSAQLYYPNG 334

Query: 897 IIEAQNGNLFIADTNNNIIRYLD 919
           +    NG +FIADT N  IR ++
Sbjct: 335 VSTGSNGEIFIADTYNYRIRKIN 357



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 161/333 (48%), Gaps = 33/333 (9%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF--DDA 654
           ++ L +P  +AI  +   ++I+D+ ++RI   +  G +I  I  +G  G          A
Sbjct: 648 SAQLYYPFSVAISSVG-EIYIADTYNHRIRKINTSG-YISTISGTGSGGYSGDGGLATSA 705

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQ 713
             N P  +A ++   + Y+ DT N+ +R+I+  +  + T+AG GT G  Y G     TS 
Sbjct: 706 QLNYPFSVAVSSVGEI-YIVDTNNYRIRKIN-TSGYISTIAGTGTGG--YNGDSILATSA 761

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHST---VDGVTRAFSGDGYERNLNGSSSLNT 770
            LN P+ +     +E + +A    H+I + +T   +  +   F GDG            T
Sbjct: 762 QLNYPYGLTISSTSE-IIVADYYNHRIRKINTSGYISTIAGGF-GDG--------DMATT 811

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
           SF        + +  EI +ADS +  IR +      S +   G   +       GD + +
Sbjct: 812 SFISAYSFEFTLN-GEIIIADSNNHRIRKITTLGYISTISGTGTAGYN------GD-EIL 863

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA-- 888
            +   L +P G+  + N +IY+AD+ NH+I+K++ AS  +ST+AG G  G+     LA  
Sbjct: 864 ATNSQLNNPNGIALSSNSEIYIADTNNHRIRKVN-ASGYISTIAGTGTGGYNGDGVLATS 922

Query: 889 AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           AQL+ P GI   +NG + IAD NN+ IR +  N
Sbjct: 923 AQLNYPNGIAIQENGEILIADNNNHRIRKIRTN 955



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 12/238 (5%)

Query: 684 IDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH 743
           +D V      +AG GT       G   TS  LN P+   +   N  +YIA    ++I + 
Sbjct: 452 LDKVTSVASKVAGTGTLNGYGGDGNLATSARLNYPYGTAFSS-NGDMYIADTNNNRIRKV 510

Query: 744 STVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
           +T   ++          + +G  + +     P  +++S    EIY+AD  +  IR +N+ 
Sbjct: 511 TTSGYISTVAGSGTGGYSGDGGLATSAQLNYPRSVAISSS-GEIYIADFNNHRIRKINI- 568

Query: 804 TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
           +G    +AG   +       +    G+ +   L +P  V  + +G+IY+AD+YNH+I+K+
Sbjct: 569 SGYISTIAGTGSV------GYSGDGGLATNAQLYYPQTVAVSSSGEIYIADAYNHRIRKI 622

Query: 864 DPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           +  S  +ST+AG G  G+    G A +AQL  P  +  +  G ++IADT N+ IR ++
Sbjct: 623 N-TSGYISTIAGTGSVGYSGDGGLATSAQLYYPFSVAISSVGEIYIADTYNHRIRKIN 679



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 64/367 (17%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF--DDA 654
           ++ L +P  +AI   +N ++I+D+ ++RI   + +G +I  +  SG  G          A
Sbjct: 159 SAQLYYPKGVAIS-PSNEIYIADTYNHRIRKVNTNG-YISTVAGSGTGGYGGDGGLATSA 216

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
             N P  ++ ++   + Y+AD  N  +R++      + T+AG+GT G    GG   ++QL
Sbjct: 217 QVNYPFSVSISSTGEI-YIADYYNQRIRKVT-TYGFISTVAGSGTAGYSGDGGLATSAQL 274

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEH------STVDGVTRAFSGDGYERNLNGSSSL 768
              P  V      E +YIA    H+I +       ST+ G T  FSGDG    L  S+ L
Sbjct: 275 Y-YPLGVSISSAGE-IYIADYYNHRIRKVTTSGYISTIAGTTYGFSGDG---GLATSAQL 329

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALN-----------------LKTGGSRLLA 811
                 P+G+S   +  EI++AD+ +  IR +N                 +   G+ +  
Sbjct: 330 ----YYPNGVSTGSN-GEIFIADTYNYRIRKINTSGYISTIAGTSSFGNNIPATGANIAP 384

Query: 812 GGDPIFPDNLFKFGDRDG------------------MGSEVLLQHPLGVYCAKNGQIYVA 853
            G P   +    F D  G                  +GS  ++Q      CAK    Y  
Sbjct: 385 TGSPTLNNGKIVFADTSGQVRQVDLTTNIISTLGGTVGSTTIVQAFYNPTCAK---YYKT 441

Query: 854 DSY----NHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           D Y    N+ + K+   +++V+    +   G     A +A+L+ P G   + NG+++IAD
Sbjct: 442 DLYILYSNYYLDKVTSVASKVAGTGTLNGYGGDGNLATSARLNYPYGTAFSSNGDMYIAD 501

Query: 910 TNNNIIR 916
           TNNN IR
Sbjct: 502 TNNNRIR 508



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 46/290 (15%)

Query: 590  DNDPRLFTSP-LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG-----E 643
            + D  L TS  L +P  L I           S+ + I+V D   + I +I +SG      
Sbjct: 752  NGDSILATSAQLNYPYGLTI-----------SSTSEIIVADYYNHRIRKINTSGYISTIA 800

Query: 644  EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
             G  DG     +F       +     ++ +AD+ NH +R+I  +   + T++G GT G  
Sbjct: 801  GGFGDGDMATTSFISAYSFEFTLNGEII-IADSNNHRIRKITTL-GYISTISGTGTAG-- 856

Query: 704  YQGGE-KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH------STVDGV-TRAFSG 755
            Y G E   T+  LN+P  +     N ++YIA    H+I +       ST+ G  T  ++G
Sbjct: 857  YNGDEILATNSQLNNPNGIALSS-NSEIYIADTNNHRIRKVNASGYISTIAGTGTGGYNG 915

Query: 756  DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDP 815
            DG    L  S+ LN     P+GI++  +  EI +AD+ +  IR +      S +   G  
Sbjct: 916  DGV---LATSAQLN----YPNGIAIQEN-GEILIADNNNHRIRKIRTNGYISTIAGSGIG 967

Query: 816  IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
             F DN         + +   L++PLGV    N +I++ DS N +I+KL P
Sbjct: 968  GFTDNT--------VATSAQLENPLGVAIGSNKEIFLTDSTNKRIRKLIP 1009



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 11/114 (9%)

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR 869
           +AGG  +  D L        + +   L  P GV  +  G+I +ADS N++I+K+   +  
Sbjct: 32  IAGGGSVVGDGL--------LATNAQLAIPAGVAISSIGEIIIADSNNNRIRKI-STNGY 82

Query: 870 VSTLAGIGKAGF--KDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           +ST+AG G A F    G A+ AQL+ P+ +  + NG+++I+DT N  IR +  N
Sbjct: 83  ISTIAGTGSASFGGDGGLAINAQLNSPSAVSISSNGDMYISDTGNQRIRKISTN 136



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 11/155 (7%)

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
           N   A P+G+++S    EI +ADS ++ IR ++     S +   G          FG   
Sbjct: 47  NAQLAIPAGVAISS-IGEIIIADSNNNRIRKISTNGYISTIAGTGSA-------SFGGDG 98

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA 888
           G+     L  P  V  + NG +Y++D+ N +I+K+   +  +ST+AG G  G+     LA
Sbjct: 99  GLAINAQLNSPSAVSISSNGDMYISDTGNQRIRKI-STNGYISTIAGSGTGGYSGDGGLA 157

Query: 889 --AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
             AQL  P G+  + +  ++IADT N+ IR ++ N
Sbjct: 158 TSAQLYYPKGVAISPSNEIYIADTYNHRIRKVNTN 192



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 152/357 (42%), Gaps = 69/357 (19%)

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSF-DDATFNRPQGLAYNAKKNLL 671
            ++I+D  + RI      G FI  +  SG  G   DG     A    P G++ ++   + 
Sbjct: 231 EIYIADYYNQRIRKVTTYG-FISTVAGSGTAGYSGDGGLATSAQLYYPLGVSISSAGEI- 288

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           Y+AD  NH +R++   +  + T+AG  T G    GG   ++QL        Y P      
Sbjct: 289 YIADYYNHRIRKVT-TSGYISTIAGT-TYGFSGDGGLATSAQL--------YYPNG---- 334

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP------DFM 785
           ++     +I+   T +   R  +  GY   + G+SS   +    +G +++P      +  
Sbjct: 335 VSTGSNGEIFIADTYNYRIRKINTSGYISTIAGTSSFGNNIP-ATGANIAPTGSPTLNNG 393

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGG-----------DP-----------IFPDNLF- 822
           +I  AD+ S  +R ++L T     L G            +P           I   N + 
Sbjct: 394 KIVFADT-SGQVRQVDLTTNIISTLGGTVGSTTIVQAFYNPTCAKYYKTDLYILYSNYYL 452

Query: 823 -----------------KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
                             +G    + +   L +P G   + NG +Y+AD+ N++I+K+  
Sbjct: 453 DKVTSVASKVAGTGTLNGYGGDGNLATSARLNYPYGTAFSSNGDMYIADTNNNRIRKV-T 511

Query: 866 ASNRVSTLAGIGKAGFKDGAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
            S  +ST+AG G  G+     LA  AQL+ P  +  + +G ++IAD NN+ IR +++
Sbjct: 512 TSGYISTVAGSGTGGYSGDGGLATSAQLNYPRSVAISSSGEIYIADFNNHRIRKINI 568


>gi|424881929|ref|ZP_18305561.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
           trifolii WU95]
 gi|392518292|gb|EIW43024.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
           trifolii WU95]
          Length = 657

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P +    +KY D    V+
Sbjct: 344 PSLAGAVEWLNSEPLTTEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVI 402

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ AV  + I +PV  D D ++WR    + WP   ++   G++  
Sbjct: 403 GVHAPEFAFEKKIDNVKKAVGDFQIGYPVAIDNDYSIWRAFENSYWPAAYLIDAKGQIRY 462

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 463 HHFGEGNYNRTEKAIQDLLREA 484


>gi|209549646|ref|YP_002281563.1| redoxin [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535402|gb|ACI55337.1| Redoxin domain protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 589

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P ++   +KY D    V+
Sbjct: 276 PSLDGAVEWLNSKPLA-TEQLRGKVVLVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVI 334

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK L+ ++ AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 335 GVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRY 394

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 395 HHFGEGNYGRTEKAIQDLLREA 416


>gi|113867753|ref|YP_726242.1| cytochrome c biogenesis protein [Ralstonia eutropha H16]
 gi|113526529|emb|CAJ92874.1| putative cytochrome c biogenesis protein [Ralstonia eutropha H16]
          Length = 596

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 1/166 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + W+N+APL  R  L+GKV ++ FWTY CINC+  LP L     KYK+   TV
Sbjct: 282 MPALDGAVQWINSAPLT-RDHLRGKVTLVYFWTYSCINCIRTLPYLRAWADKYKEQGLTV 340

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EK  + ++ AV  + I  PV  D +  +WR    + WP    V  +G + 
Sbjct: 341 IGVHTPEFAFEKSPDNVQRAVANFRIGFPVAVDSNYRIWRAFQNSYWPAAYFVDAHGNIR 400

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRL 595
               GEG   + + +++A L   G+     +   PL+      P L
Sbjct: 401 HHQFGEGDYANSERVIQALLAEAGRPSTARDVVAPLAEGAQAAPDL 446


>gi|172064999|ref|YP_001815711.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           ambifaria MC40-6]
 gi|171997241|gb|ACB68158.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           ambifaria MC40-6]
          Length = 622

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP       KY      V
Sbjct: 304 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWAHKYAPYGLVV 362

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR  G   WP    V   G++ 
Sbjct: 363 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFGNEYWPAHYFVDAQGRIR 422

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG     +  +++ L   G  + L N PL L+
Sbjct: 423 HHHFGEGEYAQSERAIQSLLAEAGHPEAL-NVPLGLT 458


>gi|171322024|ref|ZP_02910902.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           ambifaria MEX-5]
 gi|171092670|gb|EDT37964.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           ambifaria MEX-5]
          Length = 611

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP       KY      V
Sbjct: 293 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWAHKYAPYGLVV 351

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR  G   WP    V   G++ 
Sbjct: 352 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFGNEYWPAHYFVDAQGRIR 411

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG     +  +++ L   G  + L N PL L+
Sbjct: 412 HHHFGEGEYAQSERAIQSLLAEAGHPEAL-NVPLGLT 447


>gi|217977053|ref|YP_002361200.1| redoxin domain-containing protein [Methylocella silvestris BL2]
 gi|217502429|gb|ACK49838.1| Redoxin domain protein [Methylocella silvestris BL2]
          Length = 469

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 1/137 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P F   ++WLN+ PL   + L+GKVV+++FWT+ CINC+H LP +    +KY+D    V
Sbjct: 312 LPGFAGAVEWLNSQPLT-PQALRGKVVLVNFWTFNCINCLHALPHVRAWAQKYRDHGLVV 370

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +   EKD   +R AV R GI +PV  D    +W+  G   WP        G++ 
Sbjct: 371 IGVHTPELSFEKDPANVRKAVARLGIDYPVAIDTAYAVWKAFGNEYWPAAYFADAEGRIR 430

Query: 550 AQLAGEGHRKDLDDLVE 566
               GE   ++ + +++
Sbjct: 431 HHHFGEEDYENSERVIQ 447


>gi|115360701|ref|YP_777838.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           ambifaria AMMD]
 gi|115286029|gb|ABI91504.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           ambifaria AMMD]
          Length = 625

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP       KY      V
Sbjct: 307 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWAHKYAPYGLVV 365

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR  G   WP    V   G++ 
Sbjct: 366 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFGNEYWPAHYFVDAQGRIR 425

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG     +  +++ L   G  + L N PL L+
Sbjct: 426 HHHFGEGEYAQSERAIQSLLAEAGHPEAL-NVPLGLT 461


>gi|398962981|ref|ZP_10679416.1| cytochrome c biogenesis protein [Pseudomonas sp. GM30]
 gi|398150207|gb|EJM38812.1| cytochrome c biogenesis protein [Pseudomonas sp. GM30]
          Length = 591

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+  L   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 269 TLPVEGQLPPLTGAVQWLNSPALD-AQALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKY 327

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D D  +WR      WP     
Sbjct: 328 RDQGMVVIGVHAPEFAFERDVGNVTKAMKELGINYPVAIDNDYKIWRAFNNEYWPAHYFA 387

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G K + D 
Sbjct: 388 DAQGRIRYHHFGEGDYAESERVIQQLLREAGAKTVADG 425


>gi|338972782|ref|ZP_08628153.1| hypothetical protein CSIRO_1224 [Bradyrhizobiaceae bacterium SG-6C]
 gi|414169729|ref|ZP_11425462.1| hypothetical protein HMPREF9696_03317 [Afipia clevelandensis ATCC
           49720]
 gi|338233943|gb|EGP09062.1| hypothetical protein CSIRO_1224 [Bradyrhizobiaceae bacterium SG-6C]
 gi|410885461|gb|EKS33276.1| hypothetical protein HMPREF9696_03317 [Afipia clevelandensis ATCC
           49720]
          Length = 185

 Score =  106 bits (265), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 1/135 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF    +W N+ PL     L+GKVV+++FWTY C+NC++ LP +  L  KYKD    +V
Sbjct: 44  PEFTGLTNWQNSGPLTIA-GLRGKVVLVNFWTYGCVNCVNTLPHVTQLYAKYKDKGLVIV 102

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    ++ A+ R+GI++PV  D +   W       WP   +V  +G+++ 
Sbjct: 103 GVHTPEFPFERSTSNVQAALKRHGITYPVAQDNNSATWNAWRNQYWPAQYIVDQSGRVVY 162

Query: 551 QLAGEGHRKDLDDLV 565
             AGEG   ++D  V
Sbjct: 163 SHAGEGAYDEIDRTV 177


>gi|398872162|ref|ZP_10627466.1| cytochrome c biogenesis protein [Pseudomonas sp. GM74]
 gi|398204230|gb|EJM91038.1| cytochrome c biogenesis protein [Pseudomonas sp. GM74]
          Length = 591

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 269 TLPVEGNLPPLDGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKY 327

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 328 RDQGLVVIGVHAPEFAFERDVGNVTKAMKDLGINYPVAIDNEFKIWRAFNNEYWPAHYFA 387

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G  K+ D 
Sbjct: 388 DTQGRIRYHHFGEGAYAESERVIQQLLREAGAAKVSDG 425


>gi|290991059|ref|XP_002678153.1| serine/threonine protein kinase [Naegleria gruberi]
 gi|284091764|gb|EFC45409.1| serine/threonine protein kinase [Naegleria gruberi]
          Length = 1397

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 23/332 (6%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
           +   +P  + +   +  +F+SDS +NRI     +G  +  +G+       D S    T N
Sbjct: 224 ASFSYPQGIYVSQSSGEIFVSDSGNNRIRKILTNGTIVTLVGTVNIGFDSDSSGLSTTLN 283

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            P  L  N  +  LY+ADT N+ +R+ D ++  V T+AG GT  SD    +   +QL   
Sbjct: 284 NPTKLWMNKLETELYIADTGNNRIRKYDTLSGMVTTIAGGGT--SDNISIQATQAQLY-E 340

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           P  +   P  E+ YI  +   +I   S    ++R F G  +E + N S   +    +  G
Sbjct: 341 PRSIMRNPFTEEWYILESRADRISLLSQTGTISR-FCGSPFEPSFN-SDPFSIRLTKTYG 398

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           ++   + +  Y+  S + SI  L +K         G+  F       GD   + S     
Sbjct: 399 VTKVQNVL--YLTQSLTHSI--LQIKNSQVYSFGKGEAGFA------GDGLVLDSNTQFN 448

Query: 838 HPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEP 894
           +P  V + +    IY+AD+YNH+I+++DP +N ++T+AG G  G+     LA  A+L+ P
Sbjct: 449 NPTAVAFSSGTKAIYIADTYNHRIRRIDPITNIITTIAGTGSPGYNGDNILATSAKLNNP 508

Query: 895 AGII-----EAQNGNLFIADTNNNIIRYLDLN 921
            G+      +     ++IADT NN +R ++ N
Sbjct: 509 LGVSVWYDNQTMTDIVYIADTFNNKMRRINSN 540



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 162/399 (40%), Gaps = 70/399 (17%)

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFP 603
           P G  ++Q +GE    D  +     +L  G    L  T   +++  D+D    ++ L  P
Sbjct: 229 PQGIYVSQSSGEIFVSDSGNNRIRKILTNGTIVTLVGT---VNIGFDSDSSGLSTTLNNP 285

Query: 604 GKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
            KL ++ L   L+I+D+ +NRI   D     +  I   G           A    P+ + 
Sbjct: 286 TKLWMNKLETELYIADTGNNRIRKYDTLSGMVTTIAGGGTSDNISIQATQAQLYEPRSIM 345

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
            N      Y+ ++            D +  L+  GT            S+   SP++  +
Sbjct: 346 RNPFTEEWYILESR----------ADRISLLSQTGT-----------ISRFCGSPFEPSF 384

Query: 724 KP---------------INEKVYIAMAGQHQIWE--HSTVDGVTR---AFSGDGYERNLN 763
                            +   +Y+  +  H I +  +S V    +    F+GDG   +  
Sbjct: 385 NSDPFSIRLTKTYGVTKVQNVLYLTQSLTHSILQIKNSQVYSFGKGEAGFAGDGLVLD-- 442

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFP-DNL 821
                NT F  P+ ++ S     IY+AD+ +  IR ++  T     +AG G P +  DN+
Sbjct: 443 ----SNTQFNNPTAVAFSSGTKAIYIADTYNHRIRRIDPITNIITTIAGTGSPGYNGDNI 498

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQ-----IYVADSYNHKIKKLDPASNRVSTLAGI 876
                   + +   L +PLGV    + Q     +Y+AD++N+K+++++ ++  + TL G+
Sbjct: 499 --------LATSAKLNNPLGVSVWYDNQTMTDIVYIADTFNNKMRRIN-SNGFIETLIGV 549

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNII 915
           G    K+      QL  P  +  + +G +F AD+ N  I
Sbjct: 550 GNRPGKNN----QQLWHPHSVSVSFDGRVFTADSENKRI 584



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 15/213 (7%)

Query: 610 ILNNRLFISDSNHNRIVVTDLD----GNFIVQIGSSGEEGLRDGSF-DDATFNRPQGLAY 664
           I  N  FI  +  N +  T++D      F+    ++G  G  D S    A  N P GL Y
Sbjct: 117 IAGNDYFIYYTFGNGVYATNIDFLSPSIFVAGSDTAGFSG--DNSLAKSALLNNPTGLFY 174

Query: 665 NAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGEKGTSQLLNSPWDVCY 723
           +A    LYV D+ NH +R+ID   + + T+AGN  T  + Y  G    +   + P  +  
Sbjct: 175 SAFDECLYVCDSGNHVIRKIDTNTNVITTIAGNVNTNNTFYGDGILALNASFSYPQGIYV 234

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD---GYERNLNGSSSLNTSFAQPSGISL 780
              + +++++ +G ++I +  T +G      G    G++ +   SS L+T+   P+ + +
Sbjct: 235 SQSSGEIFVSDSGNNRIRKILT-NGTIVTLVGTVNIGFDSD---SSGLSTTLNNPTKLWM 290

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGG 813
           +    E+Y+AD+ ++ IR  +  +G    +AGG
Sbjct: 291 NKLETELYIADTGNNRIRKYDTLSGMVTTIAGG 323



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 61/252 (24%)

Query: 686 FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
           F   TV   AG      ++  G +     L  P+D+ +      +Y     +  + + S 
Sbjct: 41  FARYTVSNFAG---YSDEFGNGGEAIDATLAYPYDMFFSSQKNSLYFTDHYRRAVRKVSL 97

Query: 746 VDGVTRAFSGDG---------------YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
            DG    F  D                Y    NG  + N  F  PS          I+VA
Sbjct: 98  TDGKISIFQNDNGNYEYKGIAGNDYFIYYTFGNGVYATNIDFLSPS----------IFVA 147

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQ 849
            S+++                            F   + +    LL +P G+ Y A +  
Sbjct: 148 GSDTAG---------------------------FSGDNSLAKSALLNNPTGLFYSAFDEC 180

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAG---IGKAGFKDGA-ALAAQLSEPAGIIEAQ-NGN 904
           +YV DS NH I+K+D  +N ++T+AG        + DG  AL A  S P GI  +Q +G 
Sbjct: 181 LYVCDSGNHVIRKIDTNTNVITTIAGNVNTNNTFYGDGILALNASFSYPQGIYVSQSSGE 240

Query: 905 LFIADTNNNIIR 916
           +F++D+ NN IR
Sbjct: 241 IFVSDSGNNRIR 252


>gi|116695430|ref|YP_841006.1| hypothetical protein H16_B1488 [Ralstonia eutropha H16]
 gi|113529929|emb|CAJ96276.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 172

 Score =  106 bits (264), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 4/146 (2%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL     L+GKVV++DFWTY CINC++ LP +     KY+D    VV
Sbjct: 31  PEFTGIDKWLNSEPLTVA-GLRGKVVLVDFWTYSCINCINTLPHVRQWYDKYRDKGLVVV 89

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK    ++ A+ R+ I +PV  D     W       WP   +V  NG ++ 
Sbjct: 90  GVHTPEFPFEKSTANVQAALKRFDIRYPVAQDNAYATWNAWRNQYWPALYLVDANGTVVY 149

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKK 576
           +  GEG+    +  ++ AL   GK K
Sbjct: 150 KHFGEGNYAQTEAAIQKAL---GKNK 172


>gi|395496287|ref|ZP_10427866.1| Redoxin domain-containing protein [Pseudomonas sp. PAMC 25886]
          Length = 586

 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 4/147 (2%)

Query: 426 TTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+  + PA    + WLN+ PL     LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 264 TLPVEGQLPALDGAVQWLNSEPLT-AEALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKY 322

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 323 RDQGLVVIGVHAPEFAFERDVNNVTKAMKDLGITYPVAIDNNYKIWRAFNNQYWPAHYFA 382

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAAL 569
              G++     GEG   + + +++  L
Sbjct: 383 DAKGQIRYHHFGEGDYAESERVIQQLL 409


>gi|374371073|ref|ZP_09629055.1| Redoxin domain-containing protein [Cupriavidus basilensis OR16]
 gi|373097380|gb|EHP38519.1| Redoxin domain-containing protein [Cupriavidus basilensis OR16]
          Length = 591

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 1/177 (0%)

Query: 393 VNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLK 452
           V++ S +Q E G+    R  +                +P     + WLN+ PL     L+
Sbjct: 236 VDKLSAKQAEAGNGAMMRATRLKTGEDAAVALPVEGQLPGLGGAVQWLNSPPLT-AEALR 294

Query: 453 GKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLR 512
           GKVV++DFWTY CINC+  LP ++   +KY+D    V+GVH+ +F  E++L+ ++ A   
Sbjct: 295 GKVVLVDFWTYSCINCLRTLPYVKAWAQKYRDQGLVVIGVHAPEFAFERNLDNVKKATRD 354

Query: 513 YGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            GI +PV  D +  +WR      WP    +   G++     GEG     + +++  L
Sbjct: 355 LGIDYPVAVDNNYAIWRAFNNQYWPAHYFIDAQGQIRFHHFGEGEYAKSEQVIQQLL 411


>gi|161528325|ref|YP_001582151.1| redoxin domain-containing protein [Nitrosopumilus maritimus SCM1]
 gi|160339626|gb|ABX12713.1| Redoxin domain protein [Nitrosopumilus maritimus SCM1]
          Length = 369

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 78/139 (56%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+      +LNT P +  ++++GKVV+ D WTY CINC+  LP +   + KY D    +V
Sbjct: 57  PDLVGIAHYLNTTPEELAQEIEGKVVLYDIWTYSCINCIRTLPYITAWDDKYSDQGLLIV 116

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F+ EK  E ++ ++ ++GI++PVV D DM  W+      WP   +    G +  
Sbjct: 117 GVHSPEFEFEKVPENVQMSIEKHGINYPVVMDNDMETWKAFENRYWPRKYIADHEGYIRY 176

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG  ++ + +++  +
Sbjct: 177 DHIGEGGYQETEKIIQQLI 195


>gi|409428001|ref|ZP_11262482.1| transmembrane protein [Pseudomonas sp. HYS]
          Length = 192

 Score =  106 bits (264), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +PE    + WLN+ PL  R  LKGKVV++DFWTY CINC   LP +    K+Y +    V
Sbjct: 46  MPELAGAVQWLNSPPLD-REALKGKVVLVDFWTYECINCRRSLPHVNTWAKRYAERGLLV 104

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ ++ +R  V +  I++PV  D D  +W   G   WP   +V  NG++ 
Sbjct: 105 IGVHTPEYAEERVVDNVREQVAKLDIAYPVAIDNDYAIWNAFGNQFWPAHYIVDGNGQVR 164

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 165 YVHFGEGAYDTQEQVIQQLL 184


>gi|377812812|ref|YP_005042061.1| redoxin domain-containing protein [Burkholderia sp. YI23]
 gi|357937616|gb|AET91174.1| Redoxin domain protein [Burkholderia sp. YI23]
          Length = 624

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL  +  L+GKVV++D WTY CINC+  LP L+   +KY+D    V
Sbjct: 304 LPPLDGAVQWLNSPPLT-KEALRGKVVLVDVWTYSCINCLRTLPYLKSWAQKYRDQGLVV 362

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E++++ ++ AV   GI +PV  D +  +WR L    WP    +   G + 
Sbjct: 363 IGVHAPEFAFERNVDNVKQAVHDLGIDYPVAIDNNYAIWRALNNQYWPAHYFIDAQGNIR 422

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 423 YHHFGEGDYAHSERVIQTLL 442


>gi|421485194|ref|ZP_15932755.1| hypothetical protein QWC_21284 [Achromobacter piechaudii HLE]
 gi|400196463|gb|EJO29438.1| hypothetical protein QWC_21284 [Achromobacter piechaudii HLE]
          Length = 178

 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 2/144 (1%)

Query: 427 TPI-VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM 485
           TP+  PEF    +WLN+ PL      +GKVV++DFWTY CINC+  LP +    +KYKD 
Sbjct: 32  TPVPAPEFTGIENWLNSPPLTLASQ-RGKVVLVDFWTYTCINCIRTLPYVTSWHQKYKDQ 90

Query: 486 PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPN 545
              VVGVH+ +F  E+    ++ A+ R+ I++PV  D     W       WP   ++   
Sbjct: 91  GLVVVGVHTPEFPFERSTPNVQKALERFKITYPVAQDNRYATWEAYRNQYWPAVYLIDKQ 150

Query: 546 GKLLAQLAGEGHRKDLDDLVEAAL 569
           G+++ +  GEG+  + +  ++  L
Sbjct: 151 GQIVYRHFGEGNYAETEAEIQRLL 174


>gi|395444195|ref|YP_006384448.1| redoxin-containing protein [Pseudomonas putida ND6]
 gi|388558192|gb|AFK67333.1| redoxin-containing protein [Pseudomonas putida ND6]
          Length = 171

 Score =  106 bits (264), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 421 VENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           ++ R +   +P       WLN+ P+     LKGKVV++DFWT+ CINC   LP +    +
Sbjct: 20  LKARDSYGAMPSLSGASQWLNSPPVD-APGLKGKVVLVDFWTWDCINCRRSLPHVNEWAR 78

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
           +Y D    VVGVH+ ++D E D+  +R+ V R GI +PV  D D  +W   G   WP   
Sbjct: 79  RYADQGLVVVGVHTPEYDYEHDVSTLRDKVARLGIGYPVAVDNDYKVWNAWGNQFWPAHY 138

Query: 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            V   G++     GEG     + +++A L
Sbjct: 139 FVDRKGQVRHVHVGEGDYGGQEQVIQALL 167


>gi|381166372|ref|ZP_09875588.1| Cytochrome c biogenesis protein, transmembrane region
           [Phaeospirillum molischianum DSM 120]
 gi|380684592|emb|CCG40400.1| Cytochrome c biogenesis protein, transmembrane region
           [Phaeospirillum molischianum DSM 120]
          Length = 581

 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           I+P       WLN  PL    DL+GKVV++DFWTY CINC+  LP +     KY++    
Sbjct: 264 ILPSLSGATAWLNGPPLS-TDDLRGKVVLVDFWTYSCINCLRTLPYVRAWADKYREAGLV 322

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+G+H+ +F  EK +  +  AV    +++PV  D D  LWR    + WP    + P G++
Sbjct: 323 VLGIHAPEFAFEKSIPNVTGAVRDLNVTYPVAIDNDYALWRGFNNHYWPAHYAIDPQGRI 382

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGK 574
                GEG  +  + ++   L   G+
Sbjct: 383 RFHHFGEGGYEHTEQVIRQLLTEAGR 408


>gi|291615223|ref|YP_003525380.1| Cytochrome C biogenesis protein transmembrane region [Sideroxydans
           lithotrophicus ES-1]
 gi|291585335|gb|ADE12993.1| cytochrome c biogenesis protein transmembrane region [Sideroxydans
           lithotrophicus ES-1]
          Length = 565

 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 2/172 (1%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVV 457
           F      +++   I+Q     + +E  +T    P      +W+N+  L     L+GKVV+
Sbjct: 220 FTSANTTAAEQHLIRQLAQRPAAIEVAETGMAAP-LNGATEWINSPALSME-ALRGKVVL 277

Query: 458 LDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISH 517
           +DFWTY CINC+  LP L+  ++KY++    +VGVH+ +F  EKDL  +  AV   GI +
Sbjct: 278 VDFWTYSCINCLRTLPYLKAWDEKYREQGLVIVGVHAPEFAFEKDLHNVEQAVRELGIRY 337

Query: 518 PVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           PV  D    +W       WP   ++   G +  +  GEG  ++ + +++  L
Sbjct: 338 PVAVDNQYAIWNAYQNEYWPAHYLIDAQGHIRHEHFGEGAYRETEQMIQTLL 389


>gi|381203776|ref|ZP_09910881.1| Redoxin domain-containing protein [Sphingobium yanoikuyae XLDN2-5]
          Length = 577

 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           WLN+ PL  R  L+GKVV++DFWTY CINC+  LP +   E KY+     V+GVH+ +F 
Sbjct: 271 WLNSPPLS-REALRGKVVLVDFWTYSCINCLRTLPYVRAWEAKYRAAGLVVIGVHAPEFA 329

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            E+D E +  AV   G+++PV  D +  +WR    + WP    +   G++     GEG+ 
Sbjct: 330 FERDPENVAKAVRDLGVTYPVALDNNHAIWRGFNNSYWPAHYFIDARGRIRYHHFGEGNY 389

Query: 559 KDLDDLVEAAL 569
            + + +++  L
Sbjct: 390 AESEKVIQRLL 400


>gi|398958059|ref|ZP_10677489.1| cytochrome c biogenesis protein [Pseudomonas sp. GM33]
 gi|398147175|gb|EJM35891.1| cytochrome c biogenesis protein [Pseudomonas sp. GM33]
          Length = 590

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 4/153 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 269 TLPVEGDLPSLEGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKY 327

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI +PV  D +  +WR      WP     
Sbjct: 328 RDQGLVVIGVHAPEFAFERDVNNVTKAMKDLGIHYPVAIDNEFRIWRAFNNEYWPAHYFA 387

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKK 575
              G++     GEG   + + +++  L   G K
Sbjct: 388 DAQGRIRYHHFGEGAYAESERVIQQLLREAGGK 420


>gi|398875667|ref|ZP_10630835.1| cytochrome c biogenesis protein [Pseudomonas sp. GM67]
 gi|398206459|gb|EJM93223.1| cytochrome c biogenesis protein [Pseudomonas sp. GM67]
          Length = 591

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T PI   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 269 TLPIEGKLPSLDGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKY 327

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+++  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 328 RDQGLVVIGVHAPEFAFERNVGNVTKAMKDLGINYPVAIDNEFKIWRAFNNEYWPAHYFA 387

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G  K+ D 
Sbjct: 388 DAQGRIRYHHFGEGEYAESERVIQQLLREAGAAKVDDG 425


>gi|377811054|ref|YP_005043494.1| redoxin domain-containing protein [Burkholderia sp. YI23]
 gi|357940415|gb|AET93971.1| Redoxin domain protein [Burkholderia sp. YI23]
          Length = 172

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF +   W+N+APL   + L+GKVV++DFW + C +C+  LP L+   ++Y D    VV
Sbjct: 32  PEFASIDTWINSAPLTLAQ-LRGKVVLVDFWAFACGSCIESLPALKSWHRQYADQGLVVV 90

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+D   ++ AV R+GI++PV  D     W   G   WP+  ++   G+++ 
Sbjct: 91  GVHTPEFPFEEDTNNVKRAVERFGIAYPVAQDNGYATWAAYGNQRWPSRYLIDRQGRVVH 150

Query: 551 QLAGEG 556
             AGEG
Sbjct: 151 TQAGEG 156


>gi|77461927|ref|YP_351434.1| cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           fluorescens Pf0-1]
 gi|77385930|gb|ABA77443.1| putative transmembrane thioredoxin/DipZ protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 403

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 7/167 (4%)

Query: 409 ERIQQFVNYI------SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT 462
           E + + V+Y         +E+      +P     + WLN+  L     L+GKVV++DFWT
Sbjct: 231 ENVPKVVDYFVSKVRADSIEDEAGKGTMPSLSGAVQWLNSPELT-AESLRGKVVLVDFWT 289

Query: 463 YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           Y CINC H LP ++  EKKY      V+GVH+ ++  E+ ++ +++ V + GI++PV  D
Sbjct: 290 YDCINCQHTLPYVKEWEKKYGKDGLVVIGVHTPEYGYERIIDNVKDQVKKLGITYPVAID 349

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            +  +WR      WP   +V   G++     GEG  K  + +++  L
Sbjct: 350 NNYTIWRNFDNQYWPAHYLVDAKGQIRYTHFGEGSYKVQEQMIQTLL 396


>gi|398882165|ref|ZP_10637135.1| cytochrome c biogenesis protein [Pseudomonas sp. GM60]
 gi|398199414|gb|EJM86356.1| cytochrome c biogenesis protein [Pseudomonas sp. GM60]
          Length = 591

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T PI   +P     + WLN+ PL   + LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 269 TLPIEGKLPSLDGAVQWLNSPPLD-AQALKGKVVLVDFWTYSCINCLRSLPYVKAWAEKY 327

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+++  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 328 RDQGLVVIGVHAPEFAFERNVGNVTKAMKDLGINYPVAIDNEFKIWRAFNNEYWPAHYFA 387

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDN 580
              G++     GEG   + + +++  L   G  K+ D 
Sbjct: 388 DAQGRIRYHHFGEGEYAESERVIQQLLREAGAAKVDDG 425


>gi|359799859|ref|ZP_09302412.1| hypothetical protein KYC_22916 [Achromobacter arsenitoxydans SY8]
 gi|359362285|gb|EHK64029.1| hypothetical protein KYC_22916 [Achromobacter arsenitoxydans SY8]
          Length = 176

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 432 EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVG 491
           EF     WLN+ PL     L+GKVV++DFWTY CINC+  LP +    +KYKD    VVG
Sbjct: 36  EFTGIDKWLNSEPLTIE-SLRGKVVLVDFWTYTCINCIRTLPYVTSWHQKYKDQGLVVVG 94

Query: 492 VHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ 551
           VH+ +F  E+    +  A+ R+GIS+PV  D     W       WP   ++   G+++  
Sbjct: 95  VHTPEFPFERSTPNVEKALQRFGISYPVAQDNRYATWSAYRNQYWPAAYLIDKQGRVVYS 154

Query: 552 LAGEGHRKDLDDLVEAAL 569
             GEG  ++ +  ++  L
Sbjct: 155 HFGEGRYQETEAEIQRLL 172


>gi|389805791|ref|ZP_10202938.1| Redoxin domain-containing protein [Rhodanobacter thiooxydans LCS2]
 gi|388447032|gb|EIM03046.1| Redoxin domain-containing protein [Rhodanobacter thiooxydans LCS2]
          Length = 573

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 74/147 (50%), Gaps = 1/147 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P       WLN+ PL     L+GKVV++DFWTY CINC+  LP +     KY+D    V+
Sbjct: 260 PSLAGATQWLNSPPLT-TESLRGKVVLVDFWTYSCINCIRALPYVRSWADKYRDHGLVVI 318

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EKD   +  AV   G+ +PV  D D  +W+      WP    +   G++  
Sbjct: 319 GVHAPEFAFEKDPANVAKAVKDLGVDYPVALDNDYAIWKGFNNEYWPAHYFIDTQGQIRH 378

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKL 577
              GEG  +  +D++   L   G+  L
Sbjct: 379 HHFGEGEYRQSEDVIRQLLTEAGQNNL 405


>gi|330824371|ref|YP_004387674.1| NHL repeat containing protein [Alicycliphilus denitrificans K601]
 gi|329309743|gb|AEB84158.1| NHL repeat containing protein [Alicycliphilus denitrificans K601]
          Length = 362

 Score =  105 bits (263), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 88/280 (31%), Positives = 129/280 (46%), Gaps = 21/280 (7%)

Query: 638 IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
           +   G+ G  DGS      NRP GL+Y    +L Y AD  NH +R +     TV T+AG 
Sbjct: 40  LAGDGQPGAADGS--PGRVNRPHGLSYGNDGSL-YFADRGNHQVRVLR-SGGTVATVAGT 95

Query: 698 GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
           G  G  +  G    ++  N P  V  +  +  VY+A    H+I      DG     +G  
Sbjct: 96  GKAG--FADGPAHAARF-NEPIAVAVER-SGAVYVADRNNHRI-RKIRPDGTVITLAGGD 150

Query: 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPI 816
               ++G    +  F QP G++L      +YVAD  + +IR ++L       LAG G P 
Sbjct: 151 SAGFVDGDLK-SARFNQPYGVALDAAQTTLYVADYLNHAIRRIDLVLDKVDTLAGNGAPG 209

Query: 817 FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI 876
           F D         G  +      P  V     G+++V D  NH ++++ PA   V+T+AG 
Sbjct: 210 FAD---------GQRATARFNQPYNVRIDGQGRLWVPDQLNHAVRRVTPAG-EVTTVAGA 259

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           GKAG+ DG A   +   P G+    NG + +AD NNN +R
Sbjct: 260 GKAGYADGPAATVRFDNPTGVAPLPNGAVVVADRNNNRLR 299



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 18/283 (6%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           +  L+ +D  ++++ V    G  +  +  +G+ G  DG    A FN P  +A   +   +
Sbjct: 67  DGSLYFADRGNHQVRVLR-SGGTVATVAGTGKAGFADGPAHAARFNEPIAVAVE-RSGAV 124

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           YVAD  NH +R+I   + TV TLAG  + G  +  G+  +++  N P+ V        +Y
Sbjct: 125 YVADRNNHRIRKIR-PDGTVITLAGGDSAG--FVDGDLKSARF-NQPYGVALDAAQTTLY 180

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           +A    H I     V       +G+G     +G  +    F QP  + +      ++V D
Sbjct: 181 VADYLNHAIRRIDLVLDKVDTLAGNGAPGFADGQRA-TARFNQPYNVRIDGQ-GRLWVPD 238

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
             + ++R         R+   G+        K G  DG  + V   +P GV    NG + 
Sbjct: 239 QLNHAVR---------RVTPAGEVTTVAGAGKAGYADGPAATVRFDNPTGVAPLPNGAVV 289

Query: 852 VADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
           VAD  N++++ + P    V+TLAG G+AGF DG A +A+ ++P
Sbjct: 290 VADRNNNRLRLVTP-DGAVATLAGAGEAGFADGTAASARFNQP 331



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 34/264 (12%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           ++++D N++RI     DG  I   G     G  DG    A FN+P G+A +A +  LYVA
Sbjct: 124 VYVADRNNHRIRKIRPDGTVITLAGGD-SAGFVDGDLKSARFNQPYGVALDAAQTTLYVA 182

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           D  NHA+R ID V D V TLAGNG  G  +  G++ T++  N P++V            +
Sbjct: 183 DYLNHAIRRIDLVLDKVDTLAGNGAPG--FADGQRATAR-FNQPYNV-----------RI 228

Query: 735 AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS--------SLNTSFAQPSGISLSPDFME 786
            GQ ++W    ++   R  +  G    + G+         +    F  P+G++  P+   
Sbjct: 229 DGQGRLWVPDQLNHAVRRVTPAGEVTTVAGAGKAGYADGPAATVRFDNPTGVAPLPN-GA 287

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCA 845
           + VAD  ++ +R +      + L   G+  F          DG  +      PL V +  
Sbjct: 288 VVVADRNNNRLRLVTPDGAVATLAGAGEAGFA---------DGTAASARFNQPLDVEFDD 338

Query: 846 KNGQIYVADSYNHKIKKLDPASNR 869
              ++ V++   H+++ L   + R
Sbjct: 339 SMSRVLVSEDKGHRLRVLPKDTRR 362



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 15/171 (8%)

Query: 751 RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
           R  +GDG     +GS        +P G+S   D   +Y AD  +  +R L  ++GG+   
Sbjct: 38  RTLAGDGQPGAADGSPG---RVNRPHGLSYGND-GSLYFADRGNHQVRVL--RSGGTVAT 91

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
             G         K G  DG         P+ V   ++G +YVAD  NH+I+K+ P    V
Sbjct: 92  VAGTG-------KAGFADGPAHAARFNEPIAVAVERSGAVYVADRNNHRIRKIRP-DGTV 143

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDL 920
            TLAG   AGF DG   +A+ ++P G+ ++A    L++AD  N+ IR +DL
Sbjct: 144 ITLAGGDSAGFVDGDLKSARFNQPYGVALDAAQTTLYVADYLNHAIRRIDL 194



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 31/233 (13%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI------WEHS 744
           VRTLAG+G  G+       G+   +N P  + Y   +  +Y A  G HQ+         +
Sbjct: 37  VRTLAGDGQPGA-----ADGSPGRVNRPHGLSYGN-DGSLYFADRGNHQVRVLRSGGTVA 90

Query: 745 TVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT 804
           TV G  +A   DG         +    F +P  +++      +YVAD  +  IR +    
Sbjct: 91  TVAGTGKAGFADG--------PAHAARFNEPIAVAVERS-GAVYVADRNNHRIRKIR-PD 140

Query: 805 GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC-AKNGQIYVADSYNHKIKKL 863
           G    LAGGD          G  DG         P GV   A    +YVAD  NH I+++
Sbjct: 141 GTVITLAGGDSA--------GFVDGDLKSARFNQPYGVALDAAQTTLYVADYLNHAIRRI 192

Query: 864 DPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           D   ++V TLAG G  GF DG    A+ ++P  +     G L++ D  N+ +R
Sbjct: 193 DLVLDKVDTLAGNGAPGFADGQRATARFNQPYNVRIDGQGRLWVPDQLNHAVR 245



 Score = 51.2 bits (121), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 8/209 (3%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF 651
           D  L ++    P  +A+D     L+++D  ++ I   DL  + +  +  +G  G  DG  
Sbjct: 156 DGDLKSARFNQPYGVALDAAQTTLYVADYLNHAIRRIDLVLDKVDTLAGNGAPGFADGQR 215

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
             A FN+P  +  + +   L+V D  NHA+R +    + V T+AG G  G  Y  G   T
Sbjct: 216 ATARFNQPYNVRIDGQGR-LWVPDQLNHAVRRVTPAGE-VTTVAGAGKAG--YADGPAAT 271

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771
            +  N P  V   P N  V +A    +++    T DG     +G G E      ++ +  
Sbjct: 272 VRFDN-PTGVAPLP-NGAVVVADRNNNRL-RLVTPDGAVATLAGAG-EAGFADGTAASAR 327

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRAL 800
           F QP  +        + V++ +   +R L
Sbjct: 328 FNQPLDVEFDDSMSRVLVSEDKGHRLRVL 356


>gi|440286723|ref|YP_007339488.1| cytochrome c biogenesis protein [Enterobacteriaceae bacterium
           strain FGI 57]
 gi|440046245|gb|AGB77303.1| cytochrome c biogenesis protein [Enterobacteriaceae bacterium
           strain FGI 57]
          Length = 392

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 11/176 (6%)

Query: 402 EGGSSQSERIQQFVNYISDVENRKTTPIV--------PEFPAKLDWLNTAPLQFRRDLKG 453
           +G S+ S++++Q +  +   +     P+V        P       W+N+APL     LKG
Sbjct: 215 QGASAFSQQLEQRLVGLLPEQPVHLQPVVDTTPSSQLPPLTGGTAWINSAPLS-ADSLKG 273

Query: 454 KVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRY 513
           KVV++DFWT+ CINC H LP +    +KY  +  TVVGVH+ ++ +EK ++A+ +AV ++
Sbjct: 274 KVVLVDFWTFDCINCQHTLPHVREWSQKYPGL--TVVGVHTPEYPHEKKVDAVTSAVKKW 331

Query: 514 GISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            +++PVV D +  +W   G   WP   +    G+L     GEG+  + +  ++  L
Sbjct: 332 RLNYPVVMDNNYRIWNAFGNQYWPAHYLFDARGQLRYTFFGEGNYAEQEAAIKTLL 387


>gi|153868997|ref|ZP_01998705.1| protein kinase-like protein [Beggiatoa sp. PS]
 gi|152074439|gb|EDN71293.1| protein kinase-like protein [Beggiatoa sp. PS]
          Length = 1432

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 32/337 (9%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIV--QIGSSGEEGLRDGSFDDA 654
           T+ LK P  L  D   N L+I+D  ++RI   D +GN  V    G+ G EG  +G   +A
Sbjct: 408 TAELKVPKDLIFDATGN-LYIADILNHRIFKLDPEGNLTVFAGTGTKGFEG-DNGPAIEA 465

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQ 713
             + P+GLA +A+ N LY+ADT NH +R+ID  +  + T+ G G  G  Y G  E   + 
Sbjct: 466 NLSNPEGLAIDAQGN-LYIADTNNHRIRKID-SDGIITTVVGTGEAG--YAGDNEFAIAA 521

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT--------RAFSGDGYE-RNLNG 764
            L  P  + +   N   YIA +G + I + +   G +           +GDG    + + 
Sbjct: 522 QLKKPTAIVFDH-NGHFYIADSGNNSIRKINYQPGTSPLNANSLITTIAGDGRSGYSGDN 580

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
             ++      PS + +  +   +Y+AD+++  IR ++++        G    F  + +K 
Sbjct: 581 GPAIQARLGNPSSLVVDNE-NNLYIADTDNHRIRKIDIR--------GNITTFAGSGYKG 631

Query: 825 GDRDG-MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
              DG +     L  P G+     G I++AD  NH+I+K+D     + T  G G  G   
Sbjct: 632 YSGDGNLAITARLNMPTGLAVDGTGNIFIADQNNHRIRKID-GEGIIRTFTGTGVRGTAT 690

Query: 884 GAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
              LA  A++++P  I   Q GNL++A+  N+ IR +
Sbjct: 691 DGILASVAEINQPTDIALDQYGNLYLAEKGNHFIRKI 727



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 14/272 (5%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A    P+ L ++A  NL Y+AD  NH + ++D     +   AG GTKG +   G    + 
Sbjct: 409 AELKVPKDLIFDATGNL-YIADILNHRIFKLD-PEGNLTVFAGTGTKGFEGDNGPAIEAN 466

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS--SLNTS 771
           L N P  +        +YIA    H+I +  + DG+     G G E    G +  ++   
Sbjct: 467 LSN-PEGLAIDA-QGNLYIADTNNHRIRKIDS-DGIITTVVGTG-EAGYAGDNEFAIAAQ 522

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG--DPIFPDNLFKFGDRDG 829
             +P+ I    +    Y+ADS ++SIR +N + G S L A      I  D    +   +G
Sbjct: 523 LKKPTAIVFDHN-GHFYIADSGNNSIRKINYQPGTSPLNANSLITTIAGDGRSGYSGDNG 581

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AAL 887
              +  L +P  +       +Y+AD+ NH+I+K+D   N ++T AG G  G+  DG  A+
Sbjct: 582 PAIQARLGNPSSLVVDNENNLYIADTDNHRIRKIDIRGN-ITTFAGSGYKGYSGDGNLAI 640

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            A+L+ P G+     GN+FIAD NN+ IR +D
Sbjct: 641 TARLNMPTGLAVDGTGNIFIADQNNHRIRKID 672



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 587 LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL 646
            E DN P +  + L  P  LAID   N L+I+D+N++RI   D DG  I  +  +GE G 
Sbjct: 455 FEGDNGPAI-EANLSNPEGLAIDAQGN-LYIADTNNHRIRKIDSDG-IITTVVGTGEAGY 511

Query: 647 R-DGSFD-DATFNRPQGLAYNAKKNLLYVADTENHALREIDF--------VNDTVRTLAG 696
             D  F   A   +P  + ++   +  Y+AD+ N+++R+I++         N  + T+AG
Sbjct: 512 AGDNEFAIAAQLKKPTAIVFDHNGH-FYIADSGNNSIRKINYQPGTSPLNANSLITTIAG 570

Query: 697 NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD 756
           +G  G     G    ++L N    V     N  +YIA    H+I     + G    F+G 
Sbjct: 571 DGRSGYSGDNGPAIQARLGNPSSLVVDNENN--LYIADTDNHRI-RKIDIRGNITTFAGS 627

Query: 757 GYE-RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDP 815
           GY+  + +G+ ++      P+G+++      I++AD  +  IR    K  G  ++     
Sbjct: 628 GYKGYSGDGNLAITARLNMPTGLAVD-GTGNIFIADQNNHRIR----KIDGEGIIR---- 678

Query: 816 IFPDNLFKFGDRDGMGSEVL-LQHPLGVYCAKNGQIYVADSYNHKIKKL 863
            F     +    DG+ + V  +  P  +   + G +Y+A+  NH I+K+
Sbjct: 679 TFTGTGVRGTATDGILASVAEINQPTDIALDQYGNLYLAEKGNHFIRKI 727



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 106/205 (51%), Gaps = 24/205 (11%)

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS--SLNTSFAQPSGISLSPDFME 786
            +YIA    H+I++    +G    F+G G  +   G +  ++  + + P G+++      
Sbjct: 424 NLYIADILNHRIFKLDP-EGNLTVFAGTG-TKGFEGDNGPAIEANLSNPEGLAIDAQ-GN 480

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFP-DNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           +Y+AD+ +  IR ++     + ++  G+  +  DN F    +        L+ P  +   
Sbjct: 481 LYIADTNNHRIRKIDSDGIITTVVGTGEAGYAGDNEFAIAAQ--------LKKPTAIVFD 532

Query: 846 KNGQIYVADSYNHKIKKLD--------PASNRVSTLAGIGKAGFK--DGAALAAQLSEPA 895
            NG  Y+ADS N+ I+K++         A++ ++T+AG G++G+   +G A+ A+L  P+
Sbjct: 533 HNGHFYIADSGNNSIRKINYQPGTSPLNANSLITTIAGDGRSGYSGDNGPAIQARLGNPS 592

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDL 920
            ++     NL+IADT+N+ IR +D+
Sbjct: 593 SLVVDNENNLYIADTDNHRIRKIDI 617


>gi|418056193|ref|ZP_12694246.1| cytochrome c biogenesis protein transmembrane region
           [Hyphomicrobium denitrificans 1NES1]
 gi|353209412|gb|EHB74815.1| cytochrome c biogenesis protein transmembrane region
           [Hyphomicrobium denitrificans 1NES1]
          Length = 578

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     LKGKVV++DFWTY CINC+  +P +    +KYKD    V+
Sbjct: 265 PALSGAVEWLNSKPLT-PDALKGKVVLIDFWTYSCINCLRSIPYVRAWAEKYKDQGLVVI 323

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F  EK++  +R AV    I +PV  D +  +WR      WP    +  +G +  
Sbjct: 324 GVHSPEFAFEKNVANVRKAVSDLKIDYPVAIDNNFAIWRAFKNQYWPAHYFIDAHGNIRH 383

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLD 579
              GEG     + +++  L   G+  + D
Sbjct: 384 HHFGEGDYAGSERVIQKLLAEAGRTNVAD 412


>gi|255656842|ref|ZP_05402251.1| putative hydrolase [Clostridium difficile QCD-23m63]
 gi|296452325|ref|ZP_06894028.1| HAD-superfamily hydrolase [Clostridium difficile NAP08]
 gi|296877676|ref|ZP_06901704.1| HAD-superfamily hydrolase [Clostridium difficile NAP07]
 gi|296258826|gb|EFH05718.1| HAD-superfamily hydrolase [Clostridium difficile NAP08]
 gi|296431298|gb|EFH17117.1| HAD-superfamily hydrolase [Clostridium difficile NAP07]
          Length = 226

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 97/190 (51%), Gaps = 7/190 (3%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV-- 135
           KV  ++FDMDGVL +SE  S    ++ F + G  +T E +   MG      + G+ ++  
Sbjct: 3   KVEGIIFDMDGVLFDSERISLEFWIETFEKYGYTMTKEIYTSVMGRNRKGIIEGLTNIYD 62

Query: 136 KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
             V   D    K +    ++D+   P       G  ELI+  K  G K+AVA+S  R + 
Sbjct: 63  SSVPIIDLYDEKTKNMIEFMDREGAPIK----LGVNELISFLKENGYKMAVATSTKRERA 118

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
              LA A L    FDAIV  D   N KP P+IFL A+K +NV    CIVIED+  GV+AA
Sbjct: 119 VKRLAKANLK-DYFDAIVCGDDVVNSKPNPEIFLKAAKKINVNPQNCIVIEDSPMGVEAA 177

Query: 256 KAAQMRCIAV 265
               +RCI V
Sbjct: 178 YNGGIRCINV 187


>gi|424919402|ref|ZP_18342766.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
           trifolii WSM597]
 gi|392855578|gb|EJB08099.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
           trifolii WSM597]
          Length = 589

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 1/127 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P ++   +KY D    V+
Sbjct: 276 PSLDGAVEWLNSKPLA-TEQLRGKVVLVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVI 334

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK L+ ++ AV  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 335 GVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRY 394

Query: 551 QLAGEGH 557
              GEG+
Sbjct: 395 HHFGEGN 401


>gi|241204996|ref|YP_002976092.1| redoxin domain-containing protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858886|gb|ACS56553.1| Redoxin domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 591

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P +    +KY D    V+
Sbjct: 278 PSLDGAVEWLNSQPLTTEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVI 336

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ A+  + I +PV  D D ++WR    + WP   ++   G++  
Sbjct: 337 GVHAPEFAFEKKIDNVKKAIGGFQIGYPVAIDNDYSIWRAFENSYWPAAYLIDAKGQIRY 396

Query: 551 QLAGEGHRKDLDDLVE 566
              GEG+    +  ++
Sbjct: 397 HHFGEGNYDRTEQAIQ 412


>gi|398791047|ref|ZP_10551880.1| cytochrome c biogenesis protein [Pantoea sp. YR343]
 gi|398216653|gb|EJN03198.1| cytochrome c biogenesis protein [Pantoea sp. YR343]
          Length = 396

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           +T+  +P       WLN +PL   + L+GKVV++DFWTY CINC H LP +     KY+ 
Sbjct: 248 QTSSALPSLDGGTAWLNGSPLTPEK-LRGKVVLVDFWTYDCINCQHTLPHVRDWANKYQA 306

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+GVH+ ++  E++ +A+  A+ ++ + +PVV D D  +W   G   WP   +   
Sbjct: 307 QGLVVIGVHTPEYPWERNEKAVSRAIRQWQLPYPVVADNDYAIWNRFGNQYWPAHYLFDA 366

Query: 545 NGKLLAQLAGEGHRKDLDDLVEAAL 569
           +G+L     GEG+  + + ++E  L
Sbjct: 367 HGQLRYTSFGEGNYAEQEKVIEQLL 391


>gi|395795839|ref|ZP_10475140.1| Redoxin domain-containing protein [Pseudomonas sp. Ag1]
 gi|395339960|gb|EJF71800.1| Redoxin domain-containing protein [Pseudomonas sp. Ag1]
          Length = 585

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 4/155 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+ PL     LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 263 TLPVEGQLPPLDGAVQWLNSEPLT-AEALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKY 321

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 322 RDQGLVVIGVHAPEFAFERDVNNVTKAMKDLGITYPVAIDNNYKIWRAFNNQYWPAHYFA 381

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
              G++     GEG   + + +++  L   G  K+
Sbjct: 382 DAKGQIRYHHFGEGDYAESERVIQQLLREAGATKV 416


>gi|220920846|ref|YP_002496147.1| cytochrome c biogenesis protein transmembrane region
           [Methylobacterium nodulans ORS 2060]
 gi|219945452|gb|ACL55844.1| cytochrome c biogenesis protein transmembrane region
           [Methylobacterium nodulans ORS 2060]
          Length = 589

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 9/153 (5%)

Query: 424 RKTTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEK 480
           R   P+   FP+    + WLN  P Q    L+GKVV++ FWTY CINC+  +P +    +
Sbjct: 265 RSRLPVEGRFPSLDGAVQWLNGGP-QTVYQLRGKVVLVHFWTYSCINCIRTIPFVRAWAE 323

Query: 481 KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFA 540
            Y+D    V+GVH+ +F  E++L+ + +A+ ++ +S+PV  D D  LWR    + WP   
Sbjct: 324 TYRDKGLVVIGVHAPEFAFERNLDNVSSAIQKFSLSYPVAVDNDFRLWRAFRNSYWPALY 383

Query: 541 VVGPNGKLLAQLAGEG-----HRKDLDDLVEAA 568
            +   G++     GEG      R   D L EAA
Sbjct: 384 FIDAEGRVRHHHFGEGEYARSERVIQDLLAEAA 416


>gi|229589625|ref|YP_002871744.1| hypothetical protein PFLU2128 [Pseudomonas fluorescens SBW25]
 gi|229361491|emb|CAY48367.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 405

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+  L  R  LKGKVV++DFWTY CINC H LP ++   +KY      V
Sbjct: 260 MPSLYGAVEWLNSPELT-RESLKGKVVLVDFWTYDCINCQHTLPYVKQWAQKYGQQGLVV 318

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ L  +++ V + GI++PV  D    +WR      WP   +   +G+L 
Sbjct: 319 IGVHTPEYGYERILSNVKDQVRKLGITYPVAVDNHYAIWRSFDNQYWPAHYLFDADGQLR 378

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++A L
Sbjct: 379 YTHFGEGRYEVQEQMIQALL 398


>gi|218677844|ref|ZP_03525741.1| Redoxin domain protein [Rhizobium etli CIAT 894]
          Length = 202

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 1/127 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P +    +KY D    V+
Sbjct: 71  PSLDGAVEWLNSKPLTMEQ-LRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVI 129

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ +R AV  + + +PV  D D  +WR    + WP   ++   G++  
Sbjct: 130 GVHAPEFAFEKKIDNVRKAVGDFKLGYPVAIDNDYKIWRAFENSYWPAAYLIDAKGQIRY 189

Query: 551 QLAGEGH 557
              GEG+
Sbjct: 190 HHFGEGN 196


>gi|374705091|ref|ZP_09711961.1| cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           sp. S9]
          Length = 404

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 8/187 (4%)

Query: 388 NVLFGVNRPSFEQTEGGSSQSERIQQFVNYI-----SDVENRKTTPIVPEFPAKLDWLNT 442
           N+L G +     + E  +S  + + + V+Y+     +D  + +    +P     + WLN+
Sbjct: 212 NLLAGTSSAGIGKVE--TSVLQNVPKIVDYLVSKVRADGLSDQPKGAMPSLDGAVQWLNS 269

Query: 443 APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502
            PL  +  LKGKVV++DFWT+ CINC H LP ++   +KY      V+GVH+ ++  E+ 
Sbjct: 270 PPLS-KDQLKGKVVLVDFWTFDCINCRHTLPYVKDWAQKYSKDGLVVIGVHTPEYGFERI 328

Query: 503 LEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLD 562
           ++ ++  V  YGI++PV  D +  +WR      WP   ++  NG++     GEG     +
Sbjct: 329 IDNVKAKVKEYGITYPVAIDNNYAIWRNFDNQYWPAHYLIDANGQVRYTHFGEGSYDTQE 388

Query: 563 DLVEAAL 569
            +++  L
Sbjct: 389 KMIQQLL 395


>gi|110639161|ref|YP_679370.1| hypothetical protein CHU_2779 [Cytophaga hutchinsonii ATCC 33406]
 gi|110281842|gb|ABG60028.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 1051

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 136/267 (50%), Gaps = 19/267 (7%)

Query: 650 SFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK 709
           +++ A F    GLA++   NL+ VA  ++H++R+++  +  V T+AGNGT G        
Sbjct: 48  AYNTAEFYGLSGLAFDNSGNLI-VAGYQDHSIRKVN-PSGIVSTIAGNGTSGLI---DAT 102

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLN 769
           G++   N P  V      + +YIA  G H I    T  GV   F+G G   + +G+ +  
Sbjct: 103 GSAARFNLPAAVVLDAA-QNIYIADNGNHCI-RKITPAGVVITFAGSGTAGSNDGTGTA- 159

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
             F  P G+++      +YVADS ++ IR +   +G    +AG     P      G  DG
Sbjct: 160 AQFNNPYGMAIDAS-GNLYVADSGNNLIRKIT-SSGVVTTIAGNTT--P------GYVDG 209

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA 889
            G+      P+ +    +G  ++ D+ NH+I+K+  A   VST+AG G AG+ +G  + A
Sbjct: 210 TGTAARFYLPVNITLDVSGNFFITDNRNHRIRKMTSAG-VVSTVAGSGSAGYMNGTGVTA 268

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIR 916
           Q + P GI+     NL++ DTNN +IR
Sbjct: 269 QFNRPYGIVVDAFSNLYVTDTNNGVIR 295



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 149/315 (47%), Gaps = 23/315 (7%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
              P  + +D   N ++I+D N N  +        ++    SG  G  DG+   A FN P
Sbjct: 108 FNLPAAVVLDAAQN-IYIAD-NGNHCIRKITPAGVVITFAGSGTAGSNDGTGTAAQFNNP 165

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
            G+A +A  NL YVAD+ N+ +R+I   +  V T+AGN T G  Y  G  GT+     P 
Sbjct: 166 YGMAIDASGNL-YVADSGNNLIRKIT-SSGVVTTIAGNTTPG--YVDG-TGTAARFYLPV 220

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           ++    ++   +I     H+I + ++  GV    +G G    +NG+  +   F +P GI 
Sbjct: 221 NITLD-VSGNFFITDNRNHRIRKMTSA-GVVSTVAGSGSAGYMNGTG-VTAQFNRPYGIV 277

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +   F  +YV D+ +  IR +      S     G P F D         G  +    Q P
Sbjct: 278 VDA-FSNLYVTDTNNGVIRKITSSGVVSTYAGTGTPGFAD---------GPAANAQFQWP 327

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
            G+    +G +Y AD+  H+++K+ PA   VST AG G AGF + AAL ++ +   G  +
Sbjct: 328 TGLTINASGDLYEADNETHRVRKVTPAG-IVSTFAGNGNAGFANTAAL-SEYAVSNGAFD 385

Query: 900 AQNGNLFIADTNNNI 914
            +NGN+    T++ I
Sbjct: 386 -ENGNVLFTVTDDEI 399



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 23/284 (8%)

Query: 635 IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           +  I  +G  GL D +   A FN P  +  +A +N+ Y+AD  NH +R+I      V T 
Sbjct: 87  VSTIAGNGTSGLIDATGSAARFNLPAAVVLDAAQNI-YIADNGNHCIRKITPAG-VVITF 144

Query: 695 AGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS 754
           AG+GT GS+      GT+   N+P+ +     +  +Y+A +G + I    T  GV    +
Sbjct: 145 AGSGTAGSN---DGTGTAAQFNNPYGMAIDA-SGNLYVADSGNNLI-RKITSSGVVTTIA 199

Query: 755 GDGYERNLNGSSSLNTSFAQPSGISL--SPDFMEIYVADSESSSIRALNLKTGGSRLLAG 812
           G+     ++G+ +    F  P  I+L  S +F   ++ D+ +  IR +      S +   
Sbjct: 200 GNTTPGYVDGTGTA-ARFYLPVNITLDVSGNF---FITDNRNHRIRKMTSAGVVSTVAGS 255

Query: 813 GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVST 872
           G           G  +G G       P G+       +YV D+ N  I+K+  +S  VST
Sbjct: 256 GSA---------GYMNGTGVTAQFNRPYGIVVDAFSNLYVTDTNNGVIRKIT-SSGVVST 305

Query: 873 LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            AG G  GF DG A  AQ   P G+    +G+L+ AD   + +R
Sbjct: 306 YAGTGTPGFADGPAANAQFQWPTGLTINASGDLYEADNETHRVR 349


>gi|431801910|ref|YP_007228813.1| redoxin domain-containing protein [Pseudomonas putida HB3267]
 gi|430792675|gb|AGA72870.1| redoxin domain-containing protein [Pseudomonas putida HB3267]
          Length = 172

 Score =  105 bits (262), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 1/146 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           R +   +P       WLN+APL     LKGKVV++DFWT+ CINC   LP +    ++Y 
Sbjct: 24  RDSYGAMPSLSGASQWLNSAPLD-GPGLKGKVVLVDFWTWDCINCRRSLPHVNEWARRYA 82

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D    VVGVH+ ++D E D+  +R+ V   GI++PV  D D  +W   G   WP    V 
Sbjct: 83  DQGLVVVGVHTPEYDYEHDVGTLRDKVASLGIAYPVAVDNDYKVWNAWGNQFWPAHYFVD 142

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAAL 569
             G++     GEG     + +++A L
Sbjct: 143 RKGQVRHVHFGEGDYGGQEQVIQALL 168


>gi|339486911|ref|YP_004701439.1| redoxin domain-containing protein [Pseudomonas putida S16]
 gi|338837754|gb|AEJ12559.1| redoxin domain-containing protein [Pseudomonas putida S16]
          Length = 178

 Score =  105 bits (262), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 1/146 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           R +   +P       WLN+APL     LKGKVV++DFWT+ CINC   LP +    ++Y 
Sbjct: 30  RDSYGAMPSLSGASQWLNSAPLD-GPGLKGKVVLVDFWTWDCINCRRSLPHVNEWARRYA 88

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D    VVGVH+ ++D E D+  +R+ V   GI++PV  D D  +W   G   WP    V 
Sbjct: 89  DQGLVVVGVHTPEYDYEHDVGTLRDKVASLGIAYPVAVDNDYKVWNAWGNQFWPAHYFVD 148

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAAL 569
             G++     GEG     + +++A L
Sbjct: 149 RKGQVRHVHFGEGDYGGQEQVIQALL 174


>gi|339322782|ref|YP_004681676.1| hypothetical protein CNE_2c14810 [Cupriavidus necator N-1]
 gi|338169390|gb|AEI80444.1| hypothetical protein CNE_2c14810 [Cupriavidus necator N-1]
          Length = 172

 Score =  105 bits (262), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN  PL     L+GKVV++DFWTY CINC++ LP +     KY+D    VV
Sbjct: 31  PEFTGIDKWLNAEPLTVA-GLRGKVVLVDFWTYSCINCINTLPHVRQWYDKYRDKGLVVV 89

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK    ++ A+ R+ I +PV  D     W       WP   +V  NG ++ 
Sbjct: 90  GVHTPEFPFEKSTANVQAALKRFDIRYPVAQDNAYATWNAWRNQYWPALYLVDANGTVVY 149

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           +  GEG   + +  ++ AL
Sbjct: 150 KHFGEGSYAETEAAIQKAL 168


>gi|187927403|ref|YP_001897890.1| cytochrome c biogenesis protein transmembrane protein [Ralstonia
           pickettii 12J]
 gi|309779897|ref|ZP_07674651.1| cytochrome c biogenesis protein, transmembrane region [Ralstonia
           sp. 5_7_47FAA]
 gi|404385146|ref|ZP_10985535.1| hypothetical protein HMPREF0989_01335 [Ralstonia sp. 5_2_56FAA]
 gi|187724293|gb|ACD25458.1| cytochrome c biogenesis protein transmembrane region [Ralstonia
           pickettii 12J]
 gi|308921256|gb|EFP66899.1| cytochrome c biogenesis protein, transmembrane region [Ralstonia
           sp. 5_7_47FAA]
 gi|348616569|gb|EGY66069.1| hypothetical protein HMPREF0989_01335 [Ralstonia sp. 5_2_56FAA]
          Length = 466

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P     +DWLN+ PL     L+GKVV+++FWT+ CINC +VLP +   ++KYKD    
Sbjct: 287 LFPPLTGAVDWLNSPPLTVE-ALRGKVVLVNFWTFGCINCRNVLPYVREWDRKYKDQGLV 345

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VV VH+ +F  EK++E ++ A    G + P+  D    +W+    N WP    +   G++
Sbjct: 346 VVSVHAPEFAYEKNIENVKRAASELGATFPIAIDNRFEIWKAFNNNYWPANYFIDSQGRI 405

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
                GEG  +  + +++  L    K+  + + P+P++
Sbjct: 406 RFHHFGEGEYEKSERVIQQLL----KEARVGDRPVPMT 439


>gi|291223251|ref|XP_002731624.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 434

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 33/321 (10%)

Query: 626 VVTDLDGNFIVQIGSSGEEGL--RDGSFDD----ATFNRPQGLAYNAKKNLLYVADT--- 676
           VVT + G   +  G +  +    R GS D     A F+ P G+A++  + + YVAD    
Sbjct: 27  VVTTVAGGGDIHTGKTNTDCTETRSGSQDSVGKLARFHYPWGIAFDPLERVAYVADCGCP 86

Query: 677 ----ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
                +  +R++D     V TLAG+  +G  YQ G  G   + + P  +        +++
Sbjct: 87  GTKRTDDRIRKVDVKTGIVTTLAGS-LQG--YQDG-VGEKAMFHHPAGMSMHRKTRTLFV 142

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME-IYVAD 791
           A +   +I   + V G    F+G G E   +G  ++  SF  P  +++   + +  +VAD
Sbjct: 143 ADSANSRIRAINVVTGEVTTFAGSGKEELKDGLKTI-ASFFNPQAVAVDHVYKDRFFVAD 201

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI- 850
           +++ +IR ++L  G    +AGG+  F         +DG G+     HP GV       I 
Sbjct: 202 TDNHAIREVSLPDGEVTTIAGGEKGF---------KDGKGTGATFYHPAGVTIDPIRNIL 252

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI-IEAQNGNLFIAD 909
           ++AD YNH I+ +   S  V+TLAG GK GF +G    A  + P G+  + +N  L++ +
Sbjct: 253 FIADHYNHAIRMIGVESKIVTTLAGSGKPGFVNGMGNQAMFNYPEGMAYDTENKVLYVVE 312

Query: 910 TNNNIIRYLDLNKEEPELQTL 930
            +NN +R +D   +E E+++ 
Sbjct: 313 FDNNCVRIVD---DEGEVRSF 330



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 17/293 (5%)

Query: 581 TPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGS 640
           T L  SL+   D     +    P  +++      LF++DS ++RI   ++    +     
Sbjct: 106 TTLAGSLQGYQDGVGEKAMFHHPAGMSMHRKTRTLFVADSANSRIRAINVVTGEVTTFAG 165

Query: 641 SGEEGLRDGSFDDATFNRPQGLAY-NAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
           SG+E L+DG    A+F  PQ +A  +  K+  +VADT+NHA+RE+   +  V T+AG G 
Sbjct: 166 SGKEELKDGLKTIASFFNPQAVAVDHVYKDRFFVADTDNHAIREVSLPDGEVTTIAG-GE 224

Query: 700 KGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759
           KG  ++ G KGT      P  V   PI   ++IA    H I        +    +G G  
Sbjct: 225 KG--FKDG-KGTGATFYHPAGVTIDPIRNILFIADHYNHAIRMIGVESKIVTTLAGSGKP 281

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
             +NG  +    F  P G++   +   +YV + +++ +R ++   G  R   GG      
Sbjct: 282 GFVNGMGN-QAMFNYPEGMAYDTENKVLYVVEFDNNCVRIVD-DEGEVRSFVGG------ 333

Query: 820 NLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVS 871
              + G  DG+G E    HP G+ +  K   IY+ D YNH+I+ +     + S
Sbjct: 334 ---REGKSDGLGEEAKFFHPTGLTFDEKEKIIYITDQYNHQIRGISGIGAKTS 383



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 26/327 (7%)

Query: 600 LKFPGKLAIDILNNRLFISDS-------NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD 652
             +P  +A D L    +++D          +RI   D+    +  +  S  +G +DG  +
Sbjct: 63  FHYPWGIAFDPLERVAYVADCGCPGTKRTDDRIRKVDVKTGIVTTLAGS-LQGYQDGVGE 121

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
            A F+ P G++ + K   L+VAD+ N  +R I+ V   V T AG+G +  + + G K  +
Sbjct: 122 KAMFHHPAGMSMHRKTRTLFVADSANSRIRAINVVTGEVTTFAGSGKE--ELKDGLKTIA 179

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772
              N           ++ ++A    H I E S  DG     +G   E+          +F
Sbjct: 180 SFFNPQAVAVDHVYKDRFFVADTDNHAIREVSLPDGEVTTIAGG--EKGFKDGKGTGATF 237

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMG 831
             P+G+++ P    +++AD  + +IR + +++     LAG G P F          +GMG
Sbjct: 238 YHPAGVTIDPIRNILFIADHYNHAIRMIGVESKIVTTLAGSGKPGFV---------NGMG 288

Query: 832 SEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
           ++ +  +P G+ Y  +N  +YV +  N+ ++ +D     V +  G G+ G  DG    A+
Sbjct: 289 NQAMFNYPEGMAYDTENKVLYVVEFDNNCVRIVDD-EGEVRSFVG-GREGKSDGLGEEAK 346

Query: 891 LSEPAGI-IEAQNGNLFIADTNNNIIR 916
              P G+  + +   ++I D  N+ IR
Sbjct: 347 FFHPTGLTFDEKEKIIYITDQYNHQIR 373


>gi|374311754|ref|YP_005058184.1| NHL repeat containing protein [Granulicella mallensis MP5ACTX8]
 gi|358753764|gb|AEU37154.1| NHL repeat containing protein [Granulicella mallensis MP5ACTX8]
          Length = 1456

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 148/309 (47%), Gaps = 25/309 (8%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFNRPQGLAYNAKKNLLY 672
           +FI D  +N +         I  +  +G  G     G+   A  N+PQ +A +A  N+ Y
Sbjct: 99  IFIVDPGNNNVRKIAASTGIITTVAGNGTRGFSGDGGAATSAELNQPQAVALDAAGNM-Y 157

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           + DT N  +R+++     + T+AGNG+  S   GG    + L+  P  +     N  +++
Sbjct: 158 ITDTINSRVRKVEATTGIITTVAGNGSVTSSGDGGPATNAGLVQ-PAGIALDSAN-NIFV 215

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA-QPSGISLSPDFMEIYVAD 791
             +G+  + E S   G+            ++ +S+ N  F+ Q SGI++      +++ D
Sbjct: 216 TDSGEPGVREISATTGIITTV--------ISNASTPNPGFSHQLSGIAIDGS-GNVFIVD 266

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
           ++  ++  L   TG   ++AG      +    F    G  +   L +P  V     G +Y
Sbjct: 267 TDRYAVFKLTTGTGTVSVVAG------NGTRGFSGDGGAATSAELAYPQAVALDTAGNLY 320

Query: 852 VADS--YNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQLSEPAGIIEAQNGNLFI 907
           ++D    ++ I+K+  A+  +ST+AG G A F    GAA+ A+L+EP G+     GNL+I
Sbjct: 321 ISDGDYRSNNIRKVTAATGIISTVAGDGTAEFSGDGGAAVDARLNEPGGVALDTAGNLYI 380

Query: 908 ADTNNNIIR 916
           AD NN+++R
Sbjct: 381 ADVNNSVVR 389



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 160/362 (44%), Gaps = 38/362 (10%)

Query: 626 VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
           ++T + GN     G+SG  G   G    A    PQG+A +   ++ Y AD  +H +R ID
Sbjct: 503 IITTIAGN-----GTSGYTG-DGGPATSAGMYEPQGVALDNAGDV-YFADFYHHVVRRID 555

Query: 686 FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
             +  + T+AGNGT+G    GG   TS  LN P  +        +YIA +G +++ +   
Sbjct: 556 AASGIITTVAGNGTEGFSGDGGSA-TSAELNYPEGISLDSA-ANLYIADSGNYRVRKVDA 613

Query: 746 VDGVTRAFSGDGYERNL-NGSSSLNTSFAQPSGISL-SPDFMEIYVADSESSSIRALNLK 803
             G+    +GDG + +  +G  ++N  F   S +   S D M  Y+ADS   SIR +++ 
Sbjct: 614 ATGIITTVAGDGAKTDSGDGGLAVNAGFRAISDVKFDSHDNM--YIADSL--SIRRVDVV 669

Query: 804 TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
           +G    +AG  P            DG+ +     +P  +       +Y+       ++ +
Sbjct: 670 SGTITTIAGNGP----------GGDGVLAIDSYVYPYSLAFDSLDNLYLVSPTQGNVRVI 719

Query: 864 DPASNRVSTLAGIG----KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
             A+  +ST+AG G    K     G A +A L+EP  +     G+L+I++   + IR   
Sbjct: 720 TAANGYISTIAGNGVPDSKHSGDGGPATSAGLAEPDYVAVDSAGDLYISEAAGSYIRM-- 777

Query: 920 LNKEEPELQTLELKGVQPPT-PKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYLKISLP 978
           +  +   + ++   G+     P    P      +SP    I +DG     GNIY+   + 
Sbjct: 778 VTADTGIISSIGGTGLDDVNLPGDGGPATAAAIASPTG--IALDG----FGNIYIGSYVA 831

Query: 979 EE 980
           E 
Sbjct: 832 ER 833



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSE 893
            + P G+   + G I++ D  N+ ++K+  ++  ++T+AG G  GF    GAA +A+L++
Sbjct: 85  FEIPFGILVDRAGDIFIVDPGNNNVRKIAASTGIITTVAGNGTRGFSGDGGAATSAELNQ 144

Query: 894 PAGIIEAQNGNLFIADTNNNIIRYLD 919
           P  +     GN++I DT N+ +R ++
Sbjct: 145 PQAVALDAAGNMYITDTINSRVRKVE 170


>gi|389795800|ref|ZP_10198909.1| Redoxin domain-containing protein [Rhodanobacter fulvus Jip2]
 gi|388430131|gb|EIL87325.1| Redoxin domain-containing protein [Rhodanobacter fulvus Jip2]
          Length = 573

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 4/166 (2%)

Query: 415 VNYISDVENRKTTPIVPEFPA---KLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHV 471
           VN  + V+  +  P+  E P+      WLN+ PL   + L+GKVV++DFWTY CINC+  
Sbjct: 241 VNAATVVKPGEPLPVEGELPSLAGATQWLNSPPLT-AQSLRGKVVLVDFWTYSCINCLRA 299

Query: 472 LPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531
           LP +     KYKD    V+GVH+ +F  EKD   +  AV   G+ +PV  D +  +W+  
Sbjct: 300 LPYVRGWADKYKDHGLVVIGVHAPEFAFEKDPANVAKAVKDLGVDYPVALDNNYAIWQGF 359

Query: 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               WP    +   G++     GEG   + +D++   L   G K L
Sbjct: 360 NNQYWPAHYFIDAQGRIRHHHFGEGAYPESEDVIRQLLSEAGYKDL 405


>gi|167033016|ref|YP_001668247.1| redoxin domain-containing protein [Pseudomonas putida GB-1]
 gi|166859504|gb|ABY97911.1| Redoxin domain protein [Pseudomonas putida GB-1]
          Length = 178

 Score =  105 bits (261), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           R +   +P       W+N+ PL     LKGKVV++DFWT+ CINC   LP +    ++Y 
Sbjct: 30  RDSYGAMPSLSGASQWINSVPLD-GPALKGKVVLVDFWTWDCINCQRSLPHVNEWARRYA 88

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D    VVGVH+ ++D E D+  +R  V   GI++PV  D D N+W   G   WP    V 
Sbjct: 89  DQGLVVVGVHTPEYDYEHDVATLRGKVASLGIAYPVAVDNDYNVWNAWGNQFWPAHYFVD 148

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAAL 569
             G++     GEG     + +++A L
Sbjct: 149 RKGQVRHVHFGEGDYGGQEQVIQALL 174


>gi|254255656|ref|ZP_04948972.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia dolosa
           AUO158]
 gi|124901393|gb|EAY72143.1| Thiol-disulfide isomerase and thioredoxin [Burkholderia dolosa
           AUO158]
          Length = 479

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 2/150 (1%)

Query: 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V+GVH+ +
Sbjct: 168 VQWLNSPPLTAA-GLRGKVVLVDFWTYSCINCLRTLPYTTAWARKYAPYGLVVIGVHAPE 226

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F  E+D+  ++ AV   GI +PV  D    +WR  G   WP    V   G++     GEG
Sbjct: 227 FAFERDIGNVKKAVHDLGIDYPVAIDNRYAIWRAFGNEYWPAHYFVDAQGRIRYHHFGEG 286

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
                +  +++ L   G  + L N PL L+
Sbjct: 287 EYAQSERAIQSLLAEAGHPEAL-NVPLGLA 315


>gi|413964615|ref|ZP_11403841.1| redoxin domain-containing protein [Burkholderia sp. SJ98]
 gi|413927289|gb|EKS66578.1| redoxin domain-containing protein [Burkholderia sp. SJ98]
          Length = 606

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL  +  L+GKVV++D WTY CINC+  LP ++   +KY+D    V
Sbjct: 285 LPSLDGAVQWLNSPPLT-KEALRGKVVLVDVWTYSCINCLRTLPYVKTWAQKYRDQGLVV 343

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E++++ ++ AV   GI +PV  D +  +WR L    WP    +   G + 
Sbjct: 344 IGVHAPEFAFERNVDNVKKAVHDLGIDYPVAIDNNFAIWRALNNQYWPAHYFIDAKGDIR 403

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 404 YHHFGEGDYAHSEQVIQQLL 423


>gi|374262357|ref|ZP_09620924.1| hypothetical protein LDG_7337 [Legionella drancourtii LLAP12]
 gi|363537143|gb|EHL30570.1| hypothetical protein LDG_7337 [Legionella drancourtii LLAP12]
          Length = 540

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+      W+N+ PL+   DLKGKVV++DFWTY CINC+  LP ++   + Y D    V+
Sbjct: 249 PKIAGITAWINSPPLRLS-DLKGKVVLIDFWTYSCINCLRSLPYVKDWYQHYHDKGLVVI 307

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+H+ +FD EKDL  +  AV R GI +PV  D     W     + WP   ++   G+++ 
Sbjct: 308 GIHTPEFDFEKDLGNVSAAVQRDGILYPVALDNQFATWLNFNNHYWPAHYLINKQGEVVY 367

Query: 551 QLAGEG 556
           +  GEG
Sbjct: 368 EHFGEG 373


>gi|395008307|ref|ZP_10391980.1| cytochrome c biogenesis protein [Acidovorax sp. CF316]
 gi|394313661|gb|EJE50640.1| cytochrome c biogenesis protein [Acidovorax sp. CF316]
          Length = 607

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           VP     + WLN+ P      L+GKVV++DFWTY CINC+  +P ++   +KY+D    V
Sbjct: 291 VPSLDGAVQWLNS-PALTTAGLRGKVVLVDFWTYSCINCLRAMPYVKAWAEKYRDQGLVV 349

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E+D   +  AV   GI++PV  D +  +WR      WP   ++   G++ 
Sbjct: 350 VGVHAPEFAFERDAANVAKAVRDLGITYPVAIDNNYAIWRAFQNRYWPAHYLIDAQGRMR 409

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+  + +  ++  L
Sbjct: 410 YHHFGEGNYAESERAIQQLL 429


>gi|421588599|ref|ZP_16033868.1| redoxin, partial [Rhizobium sp. Pop5]
 gi|403706652|gb|EJZ21866.1| redoxin, partial [Rhizobium sp. Pop5]
          Length = 519

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL   + L+GKVV++DFWTY CINC+  +P ++   +KY D    V+
Sbjct: 206 PSLDGAVEWLNSKPLTAEQ-LRGKVVLVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVI 264

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ AV  + I +PV  D +  +WR    + WP   ++   G++  
Sbjct: 265 GVHAPEFAFEKKIDNVKKAVGDFQIGYPVAIDNNYKIWRAFENSYWPAAYLIDAKGQVRY 324

Query: 551 QLAGEGH----RKDLDDLVEAA 568
              GEG+     K + DL+  A
Sbjct: 325 HHFGEGNYGSTEKAIQDLLREA 346


>gi|330820974|ref|YP_004349836.1| redoxin domain-containing protein [Burkholderia gladioli BSR3]
 gi|327372969|gb|AEA64324.1| redoxin domain-containing protein [Burkholderia gladioli BSR3]
          Length = 587

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WL++ PL  R  L+GKVVV++FWTY CINC+  LP L+   ++Y      V
Sbjct: 272 LPMLDGASGWLDSPPLT-RDALRGKVVVVNFWTYSCINCLRTLPYLKTWAERYGKDGLVV 330

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D   +R A+   GI +PV  D D  +W+      WP F +   NG++ 
Sbjct: 331 IGVHTPEFGFERDPGNVRRALKDLGIHYPVATDNDYRIWQAFDNQYWPAFYIADANGRIR 390

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   D +  +   L
Sbjct: 391 FHHFGEGGYDDAERAIRQLL 410


>gi|421142674|ref|ZP_15602645.1| putative transmembrane protein [Pseudomonas fluorescens BBc6R8]
 gi|404506125|gb|EKA20124.1| putative transmembrane protein [Pseudomonas fluorescens BBc6R8]
          Length = 585

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 4/155 (2%)

Query: 426 TTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY 482
           T P+   +P     + WLN+ PL     LKGKVV++DFWTY CINC+  LP ++   +KY
Sbjct: 263 TLPVEGQLPPLDGAVQWLNSEPLT-AEALKGKVVLVDFWTYSCINCLRTLPYVKAWAEKY 321

Query: 483 KDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVV 542
           +D    V+GVH+ +F  E+D+  +  A+   GI++PV  D +  +WR      WP     
Sbjct: 322 RDQGLVVIGVHAPEFAFERDVNNVTKAMKDLGITYPVAIDNNYKIWRAFNNQYWPAHYFA 381

Query: 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
              G +     GEG   + + +++  L   G  K+
Sbjct: 382 DAKGHIRYHHFGEGDYAESERVIQQLLREAGATKV 416


>gi|424870972|ref|ZP_18294634.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
           WSM1455]
 gi|393166673|gb|EJC66720.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
           WSM1455]
          Length = 657

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 5/140 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P +    +KY D    V+
Sbjct: 344 PSLDGAVEWLNSEPLT-TEQLRGKVVLVDFWTYSCINCIRTIPYVRAWAEKYADQGLVVI 402

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EK ++ ++ A+  + I +PV  D D  +WR    + WP   ++   G++  
Sbjct: 403 GVHAPEFAFEKKIDNVKKAIGDFQIGYPVAIDNDYKVWRAFENSYWPAAYLIDAKGQIRY 462

Query: 551 QLAGEGH----RKDLDDLVE 566
              GEG+     K + DL+ 
Sbjct: 463 HHFGEGNYNRTEKAIQDLLR 482


>gi|398904401|ref|ZP_10652273.1| cytochrome c biogenesis protein [Pseudomonas sp. GM50]
 gi|398176053|gb|EJM63789.1| cytochrome c biogenesis protein [Pseudomonas sp. GM50]
          Length = 403

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 10/178 (5%)

Query: 401 TEGGSSQSERIQQFV-----NYISDVENRKTTPI----VPEFPAKLDWLNTAPLQFRRDL 451
           +EG ++  +R+ + V      ++S V+   T       +P     ++WLN+  L     L
Sbjct: 219 SEGVTTVEQRVLETVPKVVDYFVSKVKADSTMDAAKGAMPSLSGAVEWLNSPALS-NDSL 277

Query: 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVL 511
           +GKVV++DFWTY CINC H LP ++  EKKY+     V+GVH+ ++  E+ ++ +R+ V 
Sbjct: 278 RGKVVLVDFWTYDCINCQHTLPYVKDWEKKYEKDGLVVIGVHTPEYGYERIIDNVRDQVK 337

Query: 512 RYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           + GI++PV  D +  +WR      WP   ++   G++     GEG  +  + ++   L
Sbjct: 338 KLGITYPVAIDNNYAIWRAFNNQYWPAHYLIDAKGQVRYTHFGEGRYETQEQMIRQLL 395


>gi|395006389|ref|ZP_10390210.1| cytochrome c biogenesis protein [Acidovorax sp. CF316]
 gi|394315600|gb|EJE52390.1| cytochrome c biogenesis protein [Acidovorax sp. CF316]
          Length = 582

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           WLN AP Q    L+GKVV+++FWTY C+NC+  LP ++    KY D    VVGVH+ +F 
Sbjct: 273 WLNAAP-QSIAALRGKVVLVNFWTYSCVNCLRTLPYVKAWAHKYADRGLVVVGVHTPEFA 331

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            EKD   ++ A+   GI +PVV D D  +WR      WP    V   G++     GEG  
Sbjct: 332 FEKDPGNVQRALRDLGIPYPVVQDNDFRIWRSFNNRYWPALYFVDAQGRVRHHQFGEGGY 391

Query: 559 KDLDDLVEAALLFYGKKKL 577
              + ++E  L   G   L
Sbjct: 392 AASERVIEELLREAGASSL 410


>gi|290978943|ref|XP_002672194.1| predicted protein [Naegleria gruberi]
 gi|284085769|gb|EFC39450.1| predicted protein [Naegleria gruberi]
          Length = 1483

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 59/318 (18%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF---DDATFNRPQGLAYNAKKN 669
           +++ ++DS+++ I + ++  + +  I  +GEEG  +G F      TFN P G+ +  ++N
Sbjct: 587 DKILVADSHNHAIRLINIYASTVETIAGTGEEGF-NGDFLVPLSTTFNNPMGVCFQ-ERN 644

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG--TSQLLNSPWDVCYKPIN 727
           ++ VADT NH +R ID  N  V T+AG+   G     G++G  +  LLNSP DV Y+  +
Sbjct: 645 II-VADTNNHRVRVIDVNNRYVSTIAGSFLDG---DSGDEGLASKSLLNSPHDVQYE--D 698

Query: 728 EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
             VYIA    +              F GD       G   L      P+G+SLS  +  I
Sbjct: 699 NVVYIAGRSGNS------------GFEGD-------GGPGLTAKLNFPTGLSLSTKY--I 737

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD----RDGMGSEVLLQHPLGVY 843
            ++DS+++ +R    +      LAGG          FGD     +G+G+      P GV 
Sbjct: 738 VISDSKNNRLRFYLKEEKTIYTLAGG----------FGDNGPSENGIGT------PFGVT 781

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGI-IEA 900
            + N +IYV+D  N+ I+++   + +++T+AG G  G+   D +AL A L+ P+ I +  
Sbjct: 782 ISPNNEIYVSDVLNNLIRRI--KNGKITTVAGSGAYGYNGDDISALKASLASPSNIVVNP 839

Query: 901 QNGNLFIADTNNNIIRYL 918
              ++  +DTNN+ IR +
Sbjct: 840 LTNDIIFSDTNNHRIRII 857



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 11/164 (6%)

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
           RN+   +S+      P+GI    D   +  +D+ +  +R  N++T   R L     IF  
Sbjct: 507 RNITTIASMKDGINGPTGICYLSDRSMVIFSDTGNHVLRYYNIRT---RELG----IFAG 559

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
            L K G  +G         P+G+ C  + +I VADS+NH I+ ++  ++ V T+AG G+ 
Sbjct: 560 RLGKKGFTEGSLLNATFNQPVGLSCTLD-KILVADSHNHAIRLINIYASTVETIAGTGEE 618

Query: 880 GFKDG--AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           GF       L+   + P G+   Q  N+ +ADTNN+ +R +D+N
Sbjct: 619 GFNGDFLVPLSTTFNNPMGVC-FQERNIIVADTNNHRVRVIDVN 661


>gi|310828336|ref|YP_003960693.1| phosphatase/phosphohexomutase [Eubacterium limosum KIST612]
 gi|308740070|gb|ADO37730.1| phosphatase/phosphohexomutase [Eubacterium limosum KIST612]
          Length = 218

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 7/189 (3%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ +SE   ++  +D++AEMG+E++ ED +  MG    ++      +K  
Sbjct: 2   IEAVIFDMDGVIIDSEPDYKQIELDMYAEMGLEMSEEDAVKSMGRVTVDWW---RELKER 58

Query: 139 KGFDSEAAKKRFFE--IYLD-KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
            GF+  A +   +E  +YLD  ++  N      G    +   + KG ++A+ASS+    +
Sbjct: 59  FGFEQSAEELAEYENNLYLDFLFSDENQKTMMEGVDVFLKTLRDKGYRIAIASSSTVPAI 118

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           +  L    L    FD  VS D     KPAPDIFL A+++LNV   +C+VIED+ +G+ AA
Sbjct: 119 NRVLELFDLE-DAFDVRVSGDHVAVGKPAPDIFLRAAELLNVAPEKCMVIEDSGSGILAA 177

Query: 256 KAAQMRCIA 264
           K A M+C A
Sbjct: 178 KRAGMQCTA 186


>gi|393770897|ref|ZP_10359373.1| cytochrome c biogenesis protein, transmembrane region
           [Novosphingobium sp. Rr 2-17]
 gi|392723553|gb|EIZ80942.1| cytochrome c biogenesis protein, transmembrane region
           [Novosphingobium sp. Rr 2-17]
          Length = 569

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL  R  LKGKVV++DFWTY CINC+  LP ++     Y      V
Sbjct: 256 MPSLDGAVTWLNSPPLT-REQLKGKVVLVDFWTYSCINCLRALPYVKAWSDAYTKDGLVV 314

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVHS +F  E+D   ++ AV   GI +PV  D +  +WR    N WP    +   G++ 
Sbjct: 315 IGVHSPEFAFERDPGNVKKAVADLGIKYPVALDNNYAIWRAFKNNYWPAHYFIDAKGRVR 374

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 375 HHHYGEGGYESSERVIQRLL 394


>gi|290999745|ref|XP_002682440.1| predicted protein [Naegleria gruberi]
 gi|284096067|gb|EFC49696.1| predicted protein [Naegleria gruberi]
          Length = 731

 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 191/400 (47%), Gaps = 40/400 (10%)

Query: 545 NGKLL--AQLAGEGHRKDLDDLVEAALLF----YGKKKLLDNTPLPLSLEKDNDPRLFT- 597
           NG ++  A +   G+  D    ++A L +    Y KK   + T + ++   + D   +  
Sbjct: 129 NGTIITVAGVGSAGYSGDYSTAMQAKLNYPHGIYVKKVFSNGTIITIAGNGEGDADGYGK 188

Query: 598 ----------SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR 647
                     S L  P  +A++ LN  +FI+DS ++RI      G  I  +  +G  G  
Sbjct: 189 YNGDNMLATLSSLNLPTTVALNSLN-EVFIADSQNHRIRKVSNSG-IISTVAGTGVSGYS 246

Query: 648 -DGSFDDAT-FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ 705
            DG   + T  N P G+  ++  N++ +AD  NH +R I   +  + TLAGNGT GS  +
Sbjct: 247 GDGIPANTTKLNTPNGITIDSNDNII-IADRNNHRIRLISNSSGIISTLAGNGTTGSRDE 305

Query: 706 GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNG 764
                TS  L+ P DV      E   I     + +     ++G+    +G G+ER N + 
Sbjct: 306 E-VLATSAKLSRPADVTIGYDGE--LIITDTDNFVIRIVKLNGMISTIAGTGFERFNGDR 362

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
           ++SL+T    PS ++      E+   D  +  +R ++ K G  + +AG       N    
Sbjct: 363 ATSLSTLINHPSSMAFKDG--ELIFCDRSNHRVRRIS-KDGSVKTIAG-------NGIGG 412

Query: 825 GDRDGM-GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF-K 882
            + DGM   +  L +P GV     G IY++DSYNH+++ +   +  +ST+AG G +GF K
Sbjct: 413 YNGDGMLAIDAQLNYPHGVASDSIGNIYISDSYNHRVRIV-FTNGTISTIAGNGNSGFNK 471

Query: 883 DG-AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           DG  A ++QL+ P GI    N  LFI+D +N+ +R +  N
Sbjct: 472 DGIQATSSQLNYPFGIALNGNDELFISDRSNHRVRKVSNN 511



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 29/315 (9%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFD-DATFNRPQGLAYNAKKNLLY 672
           +F   SNH R+     DG+ +  I  +G  G   DG    DA  N P G+A ++  N+ Y
Sbjct: 384 IFCDRSNH-RVRRISKDGS-VKTIAGNGIGGYNGDGMLAIDAQLNYPHGVASDSIGNI-Y 440

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           ++D+ NH +R I F N T+ T+AGNG  G + + G + TS  LN P+ +     N++++I
Sbjct: 441 ISDSYNHRVR-IVFTNGTISTIAGNGNSGFN-KDGIQATSSQLNYPFGIALNG-NDELFI 497

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT--SFAQPSGISLSPDFMEIYVA 790
           +    H++ + S  +G+    +G G     NG   + T      P G+S+  +   +Y+A
Sbjct: 498 SDRSNHRVRKVSN-NGIISTIAGTG-SAGYNGDVIMATEAKLYLPHGVSVD-NKGNVYIA 554

Query: 791 DSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGS-EVLLQHPLGVYCAKNG 848
           D ++  IR +   TG    +AG G   F D        D M + E  +  P  V   ++G
Sbjct: 555 DKQNHRIRKILASTGMISTIAGTGQAGFND--------DNMSALESRVNSPYDVTVDESG 606

Query: 849 Q-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEPAGI-IEAQNGN 904
           Q IY+AD+ NHKI+++   +  ++T+AG G  G+     L+  +QL  P  + I+  +G 
Sbjct: 607 QVIYIADTNNHKIRRIQNGN--LTTIAGNGIGGYNQDGILSTQSQLYYPYDVSIDPVSGK 664

Query: 905 LFIADTNNNIIRYLD 919
           +FI D +N  IR L+
Sbjct: 665 IFIGDASNFRIRVLE 679



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 171/356 (48%), Gaps = 30/356 (8%)

Query: 588 EKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEE--- 644
            +D +    ++ L  P  + I   +  L I+D+++  I +  L+G  I  I  +G E   
Sbjct: 302 SRDEEVLATSAKLSRPADVTIG-YDGELIITDTDNFVIRIVKLNG-MISTIAGTGFERFN 359

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
           G R  S      N P  +A+  K   L   D  NH +R I   + +V+T+AGNG  G  Y
Sbjct: 360 GDRATSLS-TLINHPSSMAF--KDGELIFCDRSNHRVRRIS-KDGSVKTIAGNGIGG--Y 413

Query: 705 QG-GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NL 762
            G G       LN P  V    I   +YI+ +  H++    T +G     +G+G    N 
Sbjct: 414 NGDGMLAIDAQLNYPHGVASDSIGN-IYISDSYNHRVRIVFT-NGTISTIAGNGNSGFNK 471

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
           +G  + ++    P GI+L+ +  E++++D  +  +R ++     S +   G   +  ++ 
Sbjct: 472 DGIQATSSQLNYPFGIALNGN-DELFISDRSNHRVRKVSNNGIISTIAGTGSAGYNGDVI 530

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
                  M +E  L  P GV     G +Y+AD  NH+I+K+  ++  +ST+AG G+AGF 
Sbjct: 531 -------MATEAKLYLPHGVSVDNKGNVYIADKQNHRIRKILASTGMISTIAGTGQAGFN 583

Query: 883 DG--AALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
           D   +AL ++++ P  +   ++G  ++IADTNN+ IR +    +   L T+   G+
Sbjct: 584 DDNMSALESRVNSPYDVTVDESGQVIYIADTNNHKIRRI----QNGNLTTIAGNGI 635



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 51/340 (15%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNF--IVQIGSSGEEGLRDGSFD-DA 654
           S L +P  ++   +    FISD+ ++R+     +G    I   G +G  G  DG     A
Sbjct: 40  SSLNWPFDVSTGPIKGEYFISDTYNHRVRKILANGTMTTIAGTGFAGYNG--DGILSSQA 97

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
               P  +A N     +Y+ADT NH +R+I  +N T+ T+AG G+ G  Y G      Q 
Sbjct: 98  HLYYPYDVAVN-DLGEVYIADTYNHRIRKI-LLNGTIITVAGVGSAG--YSGDYSTAMQA 153

Query: 715 -LNSPWDVCYKPI-NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT-- 770
            LN P  +  K + +    I +AG  +                DGY +  NG + L T  
Sbjct: 154 KLNYPHGIYVKKVFSNGTIITIAGNGE-------------GDADGYGK-YNGDNMLATLS 199

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-------GDPIFPDNLFK 823
           S   P+ ++L+    E+++ADS++  IR ++  +G    +AG       GD I P N  K
Sbjct: 200 SLNLPTTVALNS-LNEVFIADSQNHRIRKVS-NSGIISTVAGTGVSGYSGDGI-PANTTK 256

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
                       L  P G+    N  I +AD  NH+I+ +  +S  +STLAG G  G +D
Sbjct: 257 ------------LNTPNGITIDSNDNIIIADRNNHRIRLISNSSGIISTLAGNGTTGSRD 304

Query: 884 GAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
              LA  A+LS PA +    +G L I DT+N +IR + LN
Sbjct: 305 EEVLATSAKLSRPADVTIGYDGELIITDTDNFVIRIVKLN 344



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 6/143 (4%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD--DATFN 657
           L  P  +++D   N ++I+D  ++RI         I  I  +G+ G  D +    ++  N
Sbjct: 537 LYLPHGVSVDNKGN-VYIADKQNHRIRKILASTGMISTIAGTGQAGFNDDNMSALESRVN 595

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            P  +  +    ++Y+ADT NH +R I   N  + T+AGNG  G + Q G   T   L  
Sbjct: 596 SPYDVTVDESGQVIYIADTNNHKIRRIQ--NGNLTTIAGNGIGGYN-QDGILSTQSQLYY 652

Query: 718 PWDVCYKPINEKVYIAMAGQHQI 740
           P+DV   P++ K++I  A   +I
Sbjct: 653 PYDVSIDPVSGKIFIGDASNFRI 675


>gi|393725843|ref|ZP_10345770.1| cytochrome c biogenesis protein, transmembrane region [Sphingomonas
           sp. PAMC 26605]
          Length = 371

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 94/200 (47%), Gaps = 18/200 (9%)

Query: 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAV 510
           L+GKVVV++FWTY CIN +  LP L   +++Y D    VVGVH+ +F  E+D + +  A 
Sbjct: 76  LRGKVVVVNFWTYSCINSLRALPYLRAWQERYGDKGLVVVGVHAPEFQFERDAKKVSVAT 135

Query: 511 LRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570
            + GI +P + D D  +W++     WP F  V   G+      GEG+  D + L+   L 
Sbjct: 136 RQLGIRYPNLQDNDFAVWQDFANEGWPGFYFVDAKGRTRGYRIGEGNYGDAEQLIRKLLA 195

Query: 571 FYGKKKLLDNTPLPLS------LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNR 624
             G+    D + +P+S      +E   D R   SP  + G        +   IS     R
Sbjct: 196 EAGR----DPSAIPMSPISATGIEAQADWRNLGSPEAYIGYAKAVNFRSPGGISKDASTR 251

Query: 625 IVVT--------DLDGNFIV 636
            V T        DL GN+ V
Sbjct: 252 YVSTPNLPLGGWDLAGNWTV 271


>gi|449019194|dbj|BAM82596.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
           10D]
          Length = 894

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 182/435 (41%), Gaps = 109/435 (25%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           + I+D+N++R+V   LD +  +        G  +G        RP+G+ Y+   +L+Y+A
Sbjct: 427 MVIADTNNDRVVWCLLDESGAIPKLDLRHNGTVEG------LRRPRGICYDHTHDLVYLA 480

Query: 675 DTENHAL---REIDFVNDT------VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY-- 723
           DTENH +   R   F          V  +AG G    D  G  +   Q L  PWDV    
Sbjct: 481 DTENHRICRFRVPQFAMPNPGTPYPVEWIAGTGAAKFDLFGTRRARHQSLVFPWDVAVGP 540

Query: 724 ------------------------KPINEKVYIAMAGQHQIWE------HSTVDGV---- 749
                                    P +  VY+  AG +Q+W+       +  D +    
Sbjct: 541 RFRFTPTAPLDEANSAAPLGSPDRSPASHAVYVTNAGLNQLWQIDFFAKQTAPDTMHPEP 600

Query: 750 --TRAFSGDGYERNLNGSSSLN--------------TSFAQPSGISLSPDFME------- 786
              RA  G G  R L+ +S+ N              +S AQP+G++L P+          
Sbjct: 601 RSCRAVCGSGDHRQLDITSADNERLRIEPKRSCCFVSSMAQPTGLALIPESCAGDGDTKG 660

Query: 787 --IYVADSESSSIRALNLKTGGSRLLAGGDPIFP--DNLFKFGDRD-GMGSEVLLQHPLG 841
             I   D+ESSS+R    ++     LAGG       D+LF++G  D   G     QHPLG
Sbjct: 661 PFIAFIDAESSSVRYFAPRSRSLCTLAGGGSATGDIDDLFEYGYLDHASGKNARFQHPLG 720

Query: 842 V-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI----------------GKAGFKDG 884
           + Y +    ++VAD+YN+ I+ +D ++  V T+  +                GK    D 
Sbjct: 721 ITYDSSRRALFVADTYNNCIRCVDWSTGAVDTVHLVPADPAATELLVDMDQRGKVTQDD- 779

Query: 885 AALAAQLSEPAGIIEAQ------NGNLFIADTNNN---IIRYLDLNKEEPELQTLELKGV 935
            A+   L+EP G +EA        G L+IADTN +    + +L     E   ++++ + +
Sbjct: 780 -AIPFCLNEPTG-VEADPEAFQGRGALWIADTNAHRILCVEWLPSASSEDSKESMDDEQL 837

Query: 936 -QPPTPKSRSPKRLR 949
            Q  TPK R  +R R
Sbjct: 838 AQKQTPKQRGDQRQR 852


>gi|20808387|ref|NP_623558.1| phosphatase/phosphohexomutase [Thermoanaerobacter tengcongensis
           MB4]
 gi|254479378|ref|ZP_05092713.1| haloacid dehalogenase-like hydrolase, putative [Carboxydibrachium
           pacificum DSM 12653]
 gi|20517000|gb|AAM25162.1| predicted phosphatase/phosphohexomutase [Thermoanaerobacter
           tengcongensis MB4]
 gi|214034691|gb|EEB75430.1| haloacid dehalogenase-like hydrolase, putative [Carboxydibrachium
           pacificum DSM 12653]
          Length = 224

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 2/185 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ +SE    +   ++F E+GVE+T E+ + F+G+        +     +
Sbjct: 2   IKAVIFDMDGVMIDSEPVHLKLERELFRELGVEITEEEHMTFVGSSSYYMWEKIKERFNL 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
           K    E   +R  + YLD        I  PG  EL+ +   +  K+AVASS+    ++  
Sbjct: 62  KE-SVEELVRRDRKRYLDHVLSTGEIIPVPGIQELVKKLFEREYKLAVASSSPIDVIELV 120

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +    L  + FD +VS D  +  KP PDIFL  ++ L V   EC+VIED+  GV AAK+A
Sbjct: 121 VQKLNLK-NFFDMLVSGDYVKKSKPYPDIFLYTAEKLRVKPEECVVIEDSYNGVHAAKSA 179

Query: 259 QMRCI 263
            M+ I
Sbjct: 180 GMKVI 184


>gi|359413183|ref|ZP_09205648.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Clostridium sp.
           DL-VIII]
 gi|357172067|gb|EHJ00242.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Clostridium sp.
           DL-VIII]
          Length = 217

 Score =  104 bits (259), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           K+ AV+FDMDGV+ ++E         +F + G E+T E ++  MG G  N +     + G
Sbjct: 3   KIEAVIFDMDGVIFDTERLYLENWRKIFKKYGYEMTKEIYISVMGKGRKNAIKTFLEIYG 62

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
            K        K   E+++ +  +    +  PGA E++N  K    K+A+A+SA R +   
Sbjct: 63  -KDLPIAQMYKEKDEMFMREIEEGKVLVK-PGAEEILNFLKENEYKIAIATSAKRDRTLR 120

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            L  +G+ +  FD IV  D  +N KP P+IFL A++ L+V  S CIVIED+ AG++AA  
Sbjct: 121 QLNMSGM-IKKFDVIVCGDDIKNSKPDPEIFLKAAQKLSVNYSNCIVIEDSAAGIKAAFN 179

Query: 258 AQMRCIAVTTTLSEERLKEASPSLIR 283
           A+M  + V      E LK+A   +++
Sbjct: 180 AKMIGMHV------EDLKKADDEILK 199


>gi|336250382|ref|YP_004594092.1| putative cytochrome c biogenesis protein [Enterobacter aerogenes
           KCTC 2190]
 gi|334736438|gb|AEG98813.1| putative cytochrome c biogenesis protein [Enterobacter aerogenes
           KCTC 2190]
          Length = 396

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 11/178 (6%)

Query: 402 EGGSSQSERIQQFVNYI--SDVENRKTTPIV--------PEFPAKLDWLNTAPLQFRRDL 451
           +G S  + R++Q ++     D +  +  PIV        PE      W+N+ PL     L
Sbjct: 215 QGASGLTHRLEQRLSAFMPQDQQRVRLEPIVAPRPTSAMPELQGGTAWINSPPLT-NAAL 273

Query: 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVL 511
           KGKVV++DFWT  CINC H LP +     KY+D    V+GVH+ ++  E+ L  +R AV 
Sbjct: 274 KGKVVLIDFWTRDCINCQHTLPYVRTWANKYRDAGLVVIGVHTPEYPWERSLPQLREAVS 333

Query: 512 RYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           +  +++PVV D +  +W   G   WP        G+L     GEG     + +++  L
Sbjct: 334 QRQLNYPVVADNNYAIWNAFGNQYWPAHYFFDARGQLRYTAFGEGDYARQEQVIQQLL 391


>gi|198421727|ref|XP_002130106.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 454

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 9/214 (4%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDG---NFIVQIGSSGEEGLRD 648
           D  L T+ L  P +L  D  N+RLFI+D++++ I + ++D          G    EG +D
Sbjct: 166 DGSLLTAGLNNPQQLEYDDTNDRLFIADTDNHAIRIINVDSATPKVTTLTGGPRMEGFKD 225

Query: 649 GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
           GSF +A +  P G+AY+ +K++LYV+D  NHA+R +D    TV T+AG G  G D     
Sbjct: 226 GSFAEAMWRHPTGMAYDVRKDVLYVSDHYNHAVRMLDLKKKTVTTIAGGGEPG-DVNQRI 284

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG-DGY-ERNLNGSS 766
            G    +N P  +   P +E +Y+A  G + I   S +D      +G + Y  R+  G+ 
Sbjct: 285 FGHGLAMNYPEGIAIDPEHEVLYVAEFGNNCIRMISLIDYSLTVLAGSESYGSRDAVGT- 343

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL 800
             +  F  P+G+ L  +   +YV D  +  +RA+
Sbjct: 344 --DAQFFHPTGLDLDAERKMLYVTDQYNHRVRAI 375



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 133/274 (48%), Gaps = 27/274 (9%)

Query: 606 LAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI-GSSGEEGLRDGSFDDATFNRPQGLAY 664
           +A+D    +++I+DS +N I + DL  N +    G++G++  +DGS   A  N PQ L Y
Sbjct: 123 MALDHKRQKMYIADSGNNAIRLMDLGTNEVTTFAGTNGDKAFKDGSLLTAGLNNPQQLEY 182

Query: 665 NAKKNLLYVADTENHALR--EIDFVNDTVRTLAGNGTKGSDYQGGEKGT--SQLLNSPWD 720
           +   + L++ADT+NHA+R   +D     V TL G    G   +G + G+    +   P  
Sbjct: 183 DDTNDRLFIADTDNHAIRIINVDSATPKVTTLTG----GPRMEGFKDGSFAEAMWRHPTG 238

Query: 721 VCYKPINEKVYIAMAGQHQI----WEHSTVDGVTRAFS-GDGYERNLNGSSSLNTSFAQP 775
           + Y    + +Y++    H +     +  TV  +      GD  +R      ++N     P
Sbjct: 239 MAYDVRKDVLYVSDHYNHAVRMLDLKKKTVTTIAGGGEPGDVNQRIFGHGLAMN----YP 294

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            GI++ P+   +YVA+  ++ IR ++L      +LAG +         +G RD +G++  
Sbjct: 295 EGIAIDPEHEVLYVAEFGNNCIRMISLIDYSLTVLAGSE--------SYGSRDAVGTDAQ 346

Query: 836 LQHPLGVYC-AKNGQIYVADSYNHKIKKLDPASN 868
             HP G+   A+   +YV D YNH+++ +    N
Sbjct: 347 FFHPTGLDLDAERKMLYVTDQYNHRVRAITALGN 380



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 32/290 (11%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTE-------NHALREIDFVNDTVRTLAGNGTK 700
           DG+  D  FN P G+ Y+  K+ +YVAD         N  +R +D V D   T AG+ ++
Sbjct: 47  DGALADTRFNYPWGIVYDKVKHSVYVADCGCPDTPHGNDRVRRVDLVTDVSTTSAGS-SQ 105

Query: 701 GSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER 760
           G  +  G    +Q  +    +      +K+YIA +G + I            F+G   ++
Sbjct: 106 G--FANGVGLKAQFFHIA-GMALDHKRQKMYIADSGNNAIRLMDLGTNEVTTFAGTNGDK 162

Query: 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL--LAGGDPIFP 818
                S L      P  +        +++AD+++ +IR +N+ +   ++  L GG  +  
Sbjct: 163 AFKDGSLLTAGLNNPQQLEYDDTNDRLFIADTDNHAIRIINVDSATPKVTTLTGGPRME- 221

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG 877
                 G +DG  +E + +HP G+ Y  +   +YV+D YNH ++ LD     V+T+AG G
Sbjct: 222 ------GFKDGSFAEAMWRHPTGMAYDVRKDVLYVSDHYNHAVRMLDLKKKTVTTIAGGG 275

Query: 878 KAG------FKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDL 920
           + G      F  G A    ++ P GI I+ ++  L++A+  NN IR + L
Sbjct: 276 EPGDVNQRIFGHGLA----MNYPEGIAIDPEHEVLYVAEFGNNCIRMISL 321



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 22/337 (6%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSN-----HNRIVVTDLDGNFIVQIGSSGE-EG 645
           D  L  +   +P  +  D + + ++++D       H    V  +D    V   S+G  +G
Sbjct: 47  DGALADTRFNYPWGIVYDKVKHSVYVADCGCPDTPHGNDRVRRVDLVTDVSTTSAGSSQG 106

Query: 646 LRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGSDY 704
             +G    A F    G+A + K+  +Y+AD+ N+A+R +D   + V T AG NG K   +
Sbjct: 107 FANGVGLKAQFFHIAGMALDHKRQKMYIADSGNNAIRLMDLGTNEVTTFAGTNGDKA--F 164

Query: 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT---RAFSGDGYERN 761
           + G   T+  LN+P  + Y   N++++IA    H I     VD  T      +G      
Sbjct: 165 KDGSLLTAG-LNNPQQLEYDDTNDRLFIADTDNHAI-RIINVDSATPKVTTLTGGPRMEG 222

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
               S     +  P+G++       +YV+D  + ++R L+LK      +AGG      N 
Sbjct: 223 FKDGSFAEAMWRHPTGMAYDVRKDVLYVSDHYNHAVRMLDLKKKTVTTIAGGGEPGDVNQ 282

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQI-YVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
             F      G  + + +P G+      ++ YVA+  N+ I+ +      ++ LAG    G
Sbjct: 283 RIF------GHGLAMNYPEGIAIDPEHEVLYVAEFGNNCIRMISLIDYSLTVLAGSESYG 336

Query: 881 FKDGAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIR 916
            +D     AQ   P G+ ++A+   L++ D  N+ +R
Sbjct: 337 SRDAVGTDAQFFHPTGLDLDAERKMLYVTDQYNHRVR 373



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 30/208 (14%)

Query: 744 STVDGVTRAFSGDGY------ERNLNGSSSLN-----TSFAQPSGISLSPDFMEIYVADS 792
           S ++G+ +  +G GY      +  ++G +S++     T F  P GI        +YVAD 
Sbjct: 16  SCMEGIVKTLAGGGYPHVGAVDTCVDGPNSVDGALADTRFNYPWGIVYDKVKHSVYVADC 75

Query: 793 E-------SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC- 844
                   +  +R ++L T  S   AG    F +         G+G +    H  G+   
Sbjct: 76  GCPDTPHGNDRVRRVDLVTDVSTTSAGSSQGFAN---------GVGLKAQFFHIAGMALD 126

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGI-IEAQN 902
            K  ++Y+ADS N+ I+ +D  +N V+T AG  G   FKDG+ L A L+ P  +  +  N
Sbjct: 127 HKRQKMYIADSGNNAIRLMDLGTNEVTTFAGTNGDKAFKDGSLLTAGLNNPQQLEYDDTN 186

Query: 903 GNLFIADTNNNIIRYLDLNKEEPELQTL 930
             LFIADT+N+ IR ++++   P++ TL
Sbjct: 187 DRLFIADTDNHAIRIINVDSATPKVTTL 214



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 590 DNDPRLFTSPL--KFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR 647
           D + R+F   L   +P  +AID  +  L++++  +N I +  L    +  +  S   G R
Sbjct: 279 DVNQRIFGHGLAMNYPEGIAIDPEHEVLYVAEFGNNCIRMISLIDYSLTVLAGSESYGSR 338

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDT 690
           D    DA F  P GL  +A++ +LYV D  NH +R I  + +T
Sbjct: 339 DAVGTDAQFFHPTGLDLDAERKMLYVTDQYNHRVRAITALGNT 381


>gi|320161145|ref|YP_004174369.1| putative hydrolase [Anaerolinea thermophila UNI-1]
 gi|319994998|dbj|BAJ63769.1| putative hydrolase [Anaerolinea thermophila UNI-1]
          Length = 219

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 11/191 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A++FD+DG+L +SE  S+R+   V AE G  ++ + +   +G  E +    +    G 
Sbjct: 3   IEALIFDLDGLLIDSERLSQRSWSQVMAEAGYLLSEDIYHQMIGRTEKDVKAILKQAFG- 61

Query: 139 KGFDSE----AAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
             F  E      ++RFFEI +++   P       G  EL       GL+ AVASS  R  
Sbjct: 62  NNFPFEDMYRKREQRFFEI-IEQEGMPRKA----GWDELAQYILQNGLRTAVASSTYRRL 116

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
            +  L+AA L +S F+ IV+ D   + KPAPD+FL+A+  L +P  +C+V+ED+ AG+QA
Sbjct: 117 AEKKLSAARL-LSFFEVIVTGDEVSHGKPAPDLFLTAASKLAIPPEKCVVLEDSEAGIQA 175

Query: 255 AKAAQMRCIAV 265
           A  A M+CI +
Sbjct: 176 AYNAGMKCIHI 186


>gi|77458316|ref|YP_347821.1| cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           fluorescens Pf0-1]
 gi|77382319|gb|ABA73832.1| putative transmembrane thioredoxin protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 404

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 7/167 (4%)

Query: 409 ERIQQFVNY-ISDV-----ENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT 462
           E + + V+Y +S V     E+  +   +P     + WLN+  L     L+GKVV++DFWT
Sbjct: 231 ENVPKVVDYFVSKVRADSTEDEASKGAMPSLSGAVQWLNSPELS-AESLRGKVVLVDFWT 289

Query: 463 YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           Y CINC H LP ++  EKKY      V+GVH+ ++  E+ ++ +++ V + GI++PV  D
Sbjct: 290 YDCINCQHTLPYVKEWEKKYGKDGLVVIGVHTPEYGYERIIDNVKDQVHKLGITYPVAID 349

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            +  +WR      WP   +V   G++     GEG  +  + +++  L
Sbjct: 350 NNYAIWRNFDNQYWPAHYLVDAKGQVRYTHFGEGSYQAQEQMIQQLL 396


>gi|290991466|ref|XP_002678356.1| predicted protein [Naegleria gruberi]
 gi|284091968|gb|EFC45612.1| predicted protein [Naegleria gruberi]
          Length = 1017

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 170/394 (43%), Gaps = 97/394 (24%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRDGS 650
           + L +P  +AI   +  +FISD+ + RI        ++ + GN IV  G SG+ GL    
Sbjct: 539 AKLNYPTHMAIS-ASGEIFISDNGNQRIRKIATNGKISTIAGNGIV--GFSGDNGLAT-- 593

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ---GG 707
              ATFN   G+A  A    +YVADT NH +R+I   N  + T AGNG+    YQ   GG
Sbjct: 594 --KATFNSRNGIAV-ASNGDVYVADTRNHRIRKISVSNGFISTFAGNGSVA--YQATFGG 648

Query: 708 EKG--TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST-------VDGVTRAFSGDG- 757
           + G   S  LN P+ V       +VYI  +G H+I + ST       V   +  FSGD  
Sbjct: 649 DGGLAVSAKLNLPYSVAINNATNEVYITDSGNHRIRKVSTSGIISTIVGTGSAGFSGDSG 708

Query: 758 ----------YERNLNG------SSSLN-------------------------------- 769
                     Y  ++N       S  LN                                
Sbjct: 709 LAINAKLNLPYSISINALGELFISDQLNQRIRKVSTTNYITTIGGNGGIGFNGDGLSATS 768

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
           T    P GIS S    E+Y ADS +S +R +    G    +AGG              DG
Sbjct: 769 TQLKYPFGISASS--TEVYFADSLNSRVRKI--SNGKITTIAGGIG------------DG 812

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAAL 887
           + +     +        +G+  +ADS N+ I+K+   S  +ST+AG G A F   +  A 
Sbjct: 813 LAATSAYLNSNSFTTTPSGEFIIADSNNNLIRKIST-SGIISTIAGTGAATFGGDNANAT 871

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            A+L+ P  +  + +G +FIADTNN+ IR + LN
Sbjct: 872 IAKLNNPLNVAVSSSGEIFIADTNNHRIRKIFLN 905



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 162/361 (44%), Gaps = 60/361 (16%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-----DGSFD-DATFNRPQGLAYN 665
           N  ++++D+ ++RI    +   FI     +G    +     DG     A  N P  +A N
Sbjct: 608 NGDVYVADTRNHRIRKISVSNGFISTFAGNGSVAYQATFGGDGGLAVSAKLNLPYSVAIN 667

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
              N +Y+ D+ NH +R++   +  + T+ G G+ G     G    ++L N P+ +    
Sbjct: 668 NATNEVYITDSGNHRIRKVS-TSGIISTIVGTGSAGFSGDSGLAINAKL-NLPYSISINA 725

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
           + E ++I+     +I + ST + +T      G   N +G S+ +T    P GIS S    
Sbjct: 726 LGE-LFISDQLNQRIRKVSTTNYITTIGGNGGIGFNGDGLSATSTQLKYPFGISASS--T 782

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGG-----------------------DPIFPD--- 819
           E+Y ADS +S +R +    G    +AGG                       + I  D   
Sbjct: 783 EVYFADSLNSRVRKI--SNGKITTIAGGIGDGLAATSAYLNSNSFTTTPSGEFIIADSNN 840

Query: 820 NLFK------------------FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIK 861
           NL +                  FG  +   +   L +PL V  + +G+I++AD+ NH+I+
Sbjct: 841 NLIRKISTSGIISTIAGTGAATFGGDNANATIAKLNNPLNVAVSSSGEIFIADTNNHRIR 900

Query: 862 KLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           K+   +  ++T+AG G AG+  DG  +   QL+ P+ +  +  G +FI DT+N+ IR + 
Sbjct: 901 KI-FLNGTITTIAGNGTAGYSGDGLDSTKCQLNYPSAVAVSSGGEIFIVDTHNHRIRKIA 959

Query: 920 L 920
           +
Sbjct: 960 I 960



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 17/272 (6%)

Query: 653 DATFNRPQGLA-YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
           +A  N P G+A YN     L +AD+ NH +R++ F +  V +        S    G    
Sbjct: 51  NALLNYPSGMAMYNGD---LLIADSFNHRIRKVSFSSSGVISTIAGIGSSSFSGDGGLAI 107

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN---GSSSL 768
           +  LN P  V     N  VYIA    H I + S ++G     +G   E  LN    S + 
Sbjct: 108 NAELNFPSGVAVHS-NGDVYIADKSNHVIRKVSALNGKITTIAGIAGETELNKYSNSLAT 166

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
           NT+   P  ++++    E+ ++D+ ++ IR + L  G    +AG   ++  + +  GD +
Sbjct: 167 NTTLNSPQYLAVNSSTAEVIISDTNNNVIRKVYLN-GTIVTIAG---VYGSSGYS-GD-N 220

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAA 886
           G      L +P G+     G+I  ADS NH+I+K+   + +++T+AG G AG     G A
Sbjct: 221 GNAVSAKLFNPKGIIINSIGEIIFADSRNHRIRKIST-NGKITTIAGTGTAGLSGDGGLA 279

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            +A+L+ P  +    N  + I DT N+ IR L
Sbjct: 280 TSAKLNYPNSVALGLNNEILIVDTLNHRIRKL 311



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 51/371 (13%)

Query: 587 LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL 646
           L K ++     + L  P  LA++     + ISD+N+N I    L+G  +   G  G  G 
Sbjct: 157 LNKYSNSLATNTTLNSPQYLAVNSSTAEVIISDTNNNVIRKVYLNGTIVTIAGVYGSSGY 216

Query: 647 R--DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
              +G+   A    P+G+  N+   +++ AD+ NH +R+I   N  + T+AG GT G   
Sbjct: 217 SGDNGNAVSAKLFNPKGIIINSIGEIIF-ADSRNHRIRKIS-TNGKITTIAGTGTAGLSG 274

Query: 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI---WEHSTV-----DGVTRAFSGD 756
            GG   TS  LN P  V    +N ++ I     H+I   + + T+     +G T+ FSGD
Sbjct: 275 DGGLA-TSAKLNYPNSVAL-GLNNEILIVDTLNHRIRKLFSNGTIISIAGNGTTQGFSGD 332

Query: 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL---------------- 800
                  G ++LN     P+ + ++ +  E +++D  +  IR +                
Sbjct: 333 -------GGNALNALLNLPNDVVMTLN-GEYFISDFGNHRIRKVSNSGIISTIVGTSNFG 384

Query: 801 NLKTGGSR-LLAGGDP-IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNH 858
           N+  GGS  +L  G+P I+      F D  G  S++ L   + V    +  +  A  Y  
Sbjct: 385 NIIQGGSAYVLPTGNPIIYSTKYLAFADMRGKISQIDLTTRI-VSSVISAPLPSAVGYKS 443

Query: 859 KIKK------LDPASNRVSTLAGIGKAG---FKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           K+        L   + +++ +AG GK G      G A +A++ +P  ++   + NL+I D
Sbjct: 444 KLHAMYLDSFLGSLATKITVVAGTGKLGGYAGDGGLATSARIQKPTSVV-LNDQNLYIVD 502

Query: 910 TNNNIIRYLDL 920
           T N+ IR + L
Sbjct: 503 TLNHRIRKVSL 513



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 167/374 (44%), Gaps = 67/374 (17%)

Query: 592 DPRLFTSP-LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD-- 648
           D  L TS  L +P  +A+  LNN + I D+ ++RI     +G  I   G+   +G     
Sbjct: 275 DGGLATSAKLNYPNSVALG-LNNEILIVDTLNHRIRKLFSNGTIISIAGNGTTQGFSGDG 333

Query: 649 GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
           G+  +A  N P  +         +++D  NH +R++   +  + T+ G    G+  QGG 
Sbjct: 334 GNALNALLNLPNDVVMTLNGEY-FISDFGNHRIRKVSN-SGIISTIVGTSNFGNIIQGGS 391

Query: 709 ----------------------KG-------TSQLLNS------PWDVCYKPINEKVYIA 733
                                 +G       T+++++S      P  V YK     +Y+ 
Sbjct: 392 AYVLPTGNPIIYSTKYLAFADMRGKISQIDLTTRIVSSVISAPLPSAVGYKSKLHAMYLD 451

Query: 734 MAGQHQIWEHSTVDGVTR--AFSGDGYERNLNGSSSLNTS--FAQPSGISLSPDFMEIYV 789
                   + + V G  +   ++GDG          L TS    +P+ + L+     +Y+
Sbjct: 452 SFLGSLATKITVVAGTGKLGGYAGDG---------GLATSARIQKPTSVVLNDQ--NLYI 500

Query: 790 ADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
            D+ +  IR ++L  G    +AG G   F       GD  G+ ++  L +P  +  + +G
Sbjct: 501 VDTLNHRIRKVSLTFGNITTIAGIGTAGFS------GD-GGLATKAKLNYPTHMAISASG 553

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLF 906
           +I+++D+ N +I+K+   + ++ST+AG G  GF   +G A  A  +   GI  A NG+++
Sbjct: 554 EIFISDNGNQRIRKI-ATNGKISTIAGNGIVGFSGDNGLATKATFNSRNGIAVASNGDVY 612

Query: 907 IADTNNNIIRYLDL 920
           +ADT N+ IR + +
Sbjct: 613 VADTRNHRIRKISV 626



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 39/273 (14%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P  + Y +K + +Y+         +I  V       AG G  G     G   TS  +  P
Sbjct: 436 PSAVGYKSKLHAMYLDSFLGSLATKITVV-------AGTGKLGGYAGDGGLATSARIQKP 488

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHS-------TVDGV-TRAFSGDGYERNLNGSSSLNT 770
             V     ++ +YI     H+I + S       T+ G+ T  FSGDG    L   + LN 
Sbjct: 489 TSVVLN--DQNLYIVDTLNHRIRKVSLTFGNITTIAGIGTAGFSGDG---GLATKAKLN- 542

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
               P+ +++S    EI+++D+ +  IR +    G    +AG      + +  F   +G+
Sbjct: 543 ---YPTHMAISAS-GEIFISDNGNQRIRKI-ATNGKISTIAG------NGIVGFSGDNGL 591

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK------DG 884
            ++       G+  A NG +YVAD+ NH+I+K+  ++  +ST AG G   ++       G
Sbjct: 592 ATKATFNSRNGIAVASNGDVYVADTRNHRIRKISVSNGFISTFAGNGSVAYQATFGGDGG 651

Query: 885 AALAAQLSEPAGI-IEAQNGNLFIADTNNNIIR 916
            A++A+L+ P  + I      ++I D+ N+ IR
Sbjct: 652 LAVSAKLNLPYSVAINNATNEVYITDSGNHRIR 684



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 163/380 (42%), Gaps = 74/380 (19%)

Query: 597  TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDG--NFIVQIGSSGEEGLRDGSFDDA 654
            ++ L  P  +AI+   N ++I+DS ++RI      G  + IV  GS+G  G   G   +A
Sbjct: 655  SAKLNLPYSVAINNATNEVYITDSGNHRIRKVSTSGIISTIVGTGSAGFSG-DSGLAINA 713

Query: 655  TFNRPQGLAYNAKKNLLYVADTENHALREI------------------------------ 684
              N P  ++ NA   L +++D  N  +R++                              
Sbjct: 714  KLNLPYSISINALGEL-FISDQLNQRIRKVSTTNYITTIGGNGGIGFNGDGLSATSTQLK 772

Query: 685  ---------------DFVNDTVRTLAGNG---TKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
                           D +N  VR ++ NG   T       G   TS  LNS       P 
Sbjct: 773  YPFGISASSTEVYFADSLNSRVRKIS-NGKITTIAGGIGDGLAATSAYLNSN-SFTTTPS 830

Query: 727  NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ---PSGISLSPD 783
             E + IA +  + I + ST  G+    +G G      G  + N + A+   P  +++S  
Sbjct: 831  GEFI-IADSNNNLIRKIST-SGIISTIAGTGAATF--GGDNANATIAKLNNPLNVAVSSS 886

Query: 784  FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS-EVLLQHPLGV 842
              EI++AD+ +  IR + L    + +   G   +          DG+ S +  L +P  V
Sbjct: 887  -GEIFIADTNNHRIRKIFLNGTITTIAGNGTAGYSG--------DGLDSTKCQLNYPSAV 937

Query: 843  YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGAA-LAAQLSEPAGIIEA 900
              +  G+I++ D++NH+I+K+      +ST+AG G AGF  DG   +  QL+ P GI+ A
Sbjct: 938  AVSSGGEIFIVDTHNHRIRKI-AIDGIISTIAGNGIAGFNGDGKLPINTQLNYPTGIVIA 996

Query: 901  QNGNLFIADTNNNIIRYLDL 920
             +G  +I++  N  IR + L
Sbjct: 997  SSGEAYISEEGNRRIRKIYL 1016



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 21/283 (7%)

Query: 600 LKFPGKLAIDILNNRLFISD-SNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS---FDDAT 655
           L FP  +A+   N  ++I+D SNH    V+ L+G      G +GE  L   S     + T
Sbjct: 111 LNFPSGVAVH-SNGDVYIADKSNHVIRKVSALNGKITTIAGIAGETELNKYSNSLATNTT 169

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGSDYQGGEKGTSQL 714
            N PQ LA N+    + ++DT N+ +R++ ++N T+ T+AG  G+ G     G   +++L
Sbjct: 170 LNSPQYLAVNSSTAEVIISDTNNNVIRKV-YLNGTIVTIAGVYGSSGYSGDNGNAVSAKL 228

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS--F 772
            N P  +    I E ++ A +  H+I + ST +G     +G G    L+G   L TS   
Sbjct: 229 FN-PKGIIINSIGEIIF-ADSRNHRIRKIST-NGKITTIAGTG-TAGLSGDGGLATSAKL 284

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
             P+ ++L  +  EI + D+ +  IR   L + G+ +   G+         F    G   
Sbjct: 285 NYPNSVALGLN-NEILIVDTLNHRIR--KLFSNGTIISIAGNGTTQG----FSGDGGNAL 337

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
             LL  P  V    NG+ +++D  NH+I+K+   S  +ST+ G
Sbjct: 338 NALLNLPNDVVMTLNGEYFISDFGNHRIRKVSN-SGIISTIVG 379



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 9/93 (9%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG------FKDGAALAA 889
           L  P GV    NG +Y+AD  NH I+K+   + +++T+AGI  AG      + +  A   
Sbjct: 111 LNFPSGVAVHSNGDVYIADKSNHVIRKVSALNGKITTIAGI--AGETELNKYSNSLATNT 168

Query: 890 QLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLN 921
            L+ P  + + +    + I+DTNNN+IR + LN
Sbjct: 169 TLNSPQYLAVNSSTAEVIISDTNNNVIRKVYLN 201


>gi|402825308|ref|ZP_10874609.1| redoxin domain-containing protein [Sphingomonas sp. LH128]
 gi|402261152|gb|EJU11214.1| redoxin domain-containing protein [Sphingomonas sp. LH128]
          Length = 578

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P      +W+ + PL     L+GKVV++DFWTY CINC+  LP +    +KY+D    V+
Sbjct: 264 PSLAGVTEWIGSPPLT-PESLRGKVVLVDFWTYSCINCLRSLPYVRAWAEKYRDQGLVVI 322

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  EKD   +R AV   GI++PV  D D  +WR      WP    +   G++  
Sbjct: 323 GVHTPEFAFEKDPANVRKAVGDLGIAYPVAIDNDHGVWRAFRNRYWPAHYFIDGKGRIRY 382

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG     + +++  L
Sbjct: 383 HHFGEGDYAQSERVIQRLL 401


>gi|290991506|ref|XP_002678376.1| NHL repeat domain-containing protein [Naegleria gruberi]
 gi|284091988|gb|EFC45632.1| NHL repeat domain-containing protein [Naegleria gruberi]
          Length = 985

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 162/339 (47%), Gaps = 47/339 (13%)

Query: 607 AIDILNNRLFISDSNHNRIVVTDLDGNFIVQI----GSSGEEGLRDGSFDDATF-NRPQG 661
            I +  N  + ++++ N I   D+    +  +    G SG+ G  +G    + F N PQ 
Sbjct: 220 GITVFGNAFYFAETSLNIIRKVDMQTGLLTTVAGIQGQSGDSG--EGYLATSAFLNGPQS 277

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWD 720
           +A+N+  ++ +++D++N+ ++++ F N T+ T+AG G+  +++ G G       LN P  
Sbjct: 278 VAFNSNGDM-FISDSKNNKIKKVFFNNGTIITIAGTGS--ANFTGDGSNAKFATLNLPTF 334

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT-SFAQPSGIS 779
           +        +YI  +  ++I + +    V   F G+G  RN   + S    SF  P G +
Sbjct: 335 ISVSNSTGDIYIIDSQNYRIRKITASTNVISTFLGNGLSRNYGENISAGAASFNSPVGFT 394

Query: 780 LSPDFME--IYVADSESSSIRALN-LKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL- 835
            S  +    IYVAD+ +  IR+ +   +G + +   G P           R G+G E L 
Sbjct: 395 FSLAYPNNVIYVADTGNHRIRSFSQFYSGRNIVTVAGLP-----------RPGLGGENLP 443

Query: 836 ------------LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
                       + HP+      +G + + D+ NH+I+ +  +++ V T+AG G AG+  
Sbjct: 444 ALSSSFNFPSNLVFHPI------SGDLLIVDTQNHRIRSMSKSTSFVKTIAGTGIAGYNG 497

Query: 884 GAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
              L+   +++ P+GI     G +  ADT NN++R ++L
Sbjct: 498 EGMLSNMTKMNSPSGIAVLSTGEIIFADTFNNLVRMINL 536



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 40/300 (13%)

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRI--VVTDLDGNFIVQIGSSGEEGLRDGSFD- 652
           F SP+ F   LA    NN ++++D+ ++RI        G  IV +      GL   +   
Sbjct: 387 FNSPVGFTFSLAYP--NNVIYVADTGNHRIRSFSQFYSGRNIVTVAGLPRPGLGGENLPA 444

Query: 653 -DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
             ++FN P  L ++     L + DT+NH +R +      V+T+AG G  G + +G     
Sbjct: 445 LSSSFNFPSNLVFHPISGDLLIVDTQNHRIRSMSKSTSFVKTIAGTGIAGYNGEGMLSNM 504

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL-NT 770
           ++ +NSP             IA+    +I    T + + R         NL G  S+ ++
Sbjct: 505 TK-MNSPSG-----------IAVLSTGEIIFADTFNNLVRMI-------NLQGIVSIFSS 545

Query: 771 SFAQPSGISL-SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
           + + P GI++ S D  EIY+ DS +  +     K G     AG   +     +    +  
Sbjct: 546 NVSAPVGIAVNSKD--EIYIGDSGNQRVLRCT-KQGVCVTFAGTKGV--KGYYPSSSKVA 600

Query: 830 M-GSEVLLQHPLGVYCAKN--GQIYVADSYNHKIKKL---DPASNRVSTLAGIGKAGFKD 883
           +  S+VL   P   Y A N  G +YV DS N +I K+     A+N ++ L   G   F +
Sbjct: 601 VPVSQVLFTQP--TYIAPNNAGDVYVVDSGNGRIVKIARDGKAANVLNNLVNPGNIAFNE 658



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
            + P+GI++  +    Y A++  + IR ++++TG    +AG      D+         + 
Sbjct: 215 LSSPTGITVFGN--AFYFAETSLNIIRKVDMQTGLLTTVAGIQGQSGDS-----GEGYLA 267

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAA 889
           +   L  P  V    NG ++++DS N+KIKK+   +  + T+AG G A F  DG+ A  A
Sbjct: 268 TSAFLNGPQSVAFNSNGDMFISDSKNNKIKKVFFNNGTIITIAGTGSANFTGDGSNAKFA 327

Query: 890 QLSEPAGI-IEAQNGNLFIADTNNNIIR 916
            L+ P  I +    G+++I D+ N  IR
Sbjct: 328 TLNLPTFISVSNSTGDIYIIDSQNYRIR 355



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 23/201 (11%)

Query: 735 AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ----PSGISLSPDFMEIYVA 790
           AG++ ++E   +D VT+  + +    N NG        A+    PSG++++ +  ++  +
Sbjct: 113 AGKYFVYE---LDPVTKILTKNSVSLNANGPVGTIPMAAEVISDPSGLAVTSN-GDLLFS 168

Query: 791 DSESSSIRALNLKTGG------SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
           DS+++ IR +N+   G      + ++AG           +G    + +  +L  P G+  
Sbjct: 169 DSKANVIRRINMTAPGLDGNYTTTIVAG-----VVGASGYGGESVVATGAILSSPTGITV 223

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALA--AQLSEPAGIIEAQ 901
             N   Y A++  + I+K+D  +  ++T+AGI G++G      LA  A L+ P  +    
Sbjct: 224 FGNA-FYFAETSLNIIRKVDMQTGLLTTVAGIQGQSGDSGEGYLATSAFLNGPQSVAFNS 282

Query: 902 NGNLFIADTNNNIIRYLDLNK 922
           NG++FI+D+ NN I+ +  N 
Sbjct: 283 NGDMFISDSKNNKIKKVFFNN 303


>gi|408482542|ref|ZP_11188761.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas sp. R81]
          Length = 402

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 10/168 (5%)

Query: 409 ERIQQFVNYISDVENRKTTP-------IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW 461
           E + + V+Y+  V   K  P        +P     ++WLN+  L  R  LKGKVV++DFW
Sbjct: 231 ENVPKVVDYV--VSKVKADPGQDNANGAMPSLAGAVEWLNSPELT-RESLKGKVVLVDFW 287

Query: 462 TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVN 521
           TY CINC H LP ++   KKY+     V+GVH+ ++  E+ +  +++ V + GI++PV  
Sbjct: 288 TYDCINCQHTLPYVKQWAKKYEKDGLVVIGVHTPEYGYERIIGNVKDQVRKLGITYPVAI 347

Query: 522 DGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           D +  +WR      WP   ++   G++     GEG     + +++  L
Sbjct: 348 DNNYAIWRNFDNQYWPAHYLIDAKGQVRYTHFGEGRYDAQEQMIQTLL 395


>gi|186473827|ref|YP_001861169.1| redoxin domain-containing protein [Burkholderia phymatum STM815]
 gi|184196159|gb|ACC74123.1| Redoxin domain protein [Burkholderia phymatum STM815]
          Length = 581

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+GKV V++FWTY CINC+  LP L+    +Y      V
Sbjct: 266 LPSLDGAQSWLNSPPLT-ADALRGKVTVVNFWTYSCINCLRTLPYLKTWSDRYGQDGLVV 324

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E+D   ++ AV   GI +PV  D    +W+  G   WP F +V   G++ 
Sbjct: 325 VGVHTPEFAFERDPSNVKRAVRDLGIRYPVAIDNGYGIWQAFGNQYWPAFYIVDAQGRIR 384

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   + + +++  L
Sbjct: 385 YHHFGEGGYGEAEKVIQQLL 404


>gi|390574321|ref|ZP_10254456.1| redoxin domain-containing protein [Burkholderia terrae BS001]
 gi|389933710|gb|EIM95703.1| redoxin domain-containing protein [Burkholderia terrae BS001]
          Length = 586

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+GKV V++FWTY CINC+  LP L+    +Y++    V
Sbjct: 271 LPSLDGAESWLNSPPLT-SDALRGKVAVVNFWTYSCINCLRTLPYLKTWSDRYRNDGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E D   ++ AV   G+ +PV  D    +W+  G   WP F +V   G++ 
Sbjct: 330 VGVHTPEFAFEHDPSNVKRAVADLGVHYPVAIDNGYKIWQAFGNQYWPAFYIVDAQGRIR 389

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   + + +++  L
Sbjct: 390 YHHFGEGGYAEAEKVIQQLL 409


>gi|170701510|ref|ZP_02892462.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Burkholderia ambifaria IOP40-10]
 gi|170133567|gb|EDT01943.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Burkholderia ambifaria IOP40-10]
          Length = 340

 Score =  103 bits (257), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP       KY      V
Sbjct: 22  LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWAHKYAPYGLVV 80

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR  G   WP    +   G++ 
Sbjct: 81  IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFGNEYWPAHYFIDAQGRIR 140

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG     +  +++ L   G  + L N PL L+
Sbjct: 141 HHHFGEGEYAQSERAIQSLLAEAGHPEAL-NVPLGLT 176


>gi|323528564|ref|YP_004230716.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           sp. CCGE1001]
 gi|323385566|gb|ADX57656.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           sp. CCGE1001]
          Length = 604

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 1/127 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+ P +   DL+GKVV+++FWTY CINC+  LP L+    +Y+D    V
Sbjct: 289 LPTLSGAVEWLNSPP-RTPADLRGKVVIVNFWTYSCINCLRTLPYLKAWSNRYRDQGLVV 347

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E ++  ++ A     I +P+  D ++ +WR      WP F +V  +G + 
Sbjct: 348 IGVHAPEFAFEHNVANVKRAAADLHIDYPIAVDNNLAVWRAFDNQYWPAFYIVDAHGDIR 407

Query: 550 AQLAGEG 556
               GEG
Sbjct: 408 YHQFGEG 414


>gi|170721095|ref|YP_001748783.1| redoxin domain-containing protein [Pseudomonas putida W619]
 gi|169759098|gb|ACA72414.1| Redoxin domain protein [Pseudomonas putida W619]
          Length = 184

 Score =  103 bits (256), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           R +   +P       WLN+  L   + LKGKVV++DFWT+ CINC   LP +    ++Y 
Sbjct: 36  RDSYGAMPSLSGASQWLNSPALDATQ-LKGKVVLVDFWTWDCINCQRSLPHVNDWARRYA 94

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D    VVGVH+ ++D E D+  +++ V R GI++PV  D D  +W   G   WP    V 
Sbjct: 95  DQGLVVVGVHTPEYDYEHDVSQLKSKVARLGIAYPVAVDNDHRVWNAWGNQFWPAHYFVD 154

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAAL 569
             G++     GEG   + + +++A L
Sbjct: 155 RQGQVRHVHFGEGDYDEQERVIKALL 180


>gi|221215701|ref|ZP_03588662.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           multivorans CGD1]
 gi|221164403|gb|EED96888.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           multivorans CGD1]
          Length = 626

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 308 LPSLDGAVQWLNSPPLT-AATLRGKVVLVDFWTYSCINCLRTLPYTNAWARKYARYGLVV 366

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    V   G++ 
Sbjct: 367 IGVHAPEFAFERDIGNVKKAVRDLGIDYPVAIDNRYAIWRAFNNEYWPAHYFVDAQGRIR 426

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG   + +  +++ L   G    L N P+ L+
Sbjct: 427 RHHFGEGEYAESERAIQSLLAEAGHPDAL-NVPIGLT 462


>gi|337278262|ref|YP_004617733.1| hypothetical protein Rta_06360 [Ramlibacter tataouinensis TTB310]
 gi|334729338|gb|AEG91714.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
          Length = 389

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN++PL  +  L+GKVV++DFWTY CIN    LP +     +Y+D    V
Sbjct: 74  MPSLDGAVGWLNSSPLTAQ-ALRGKVVLVDFWTYSCINWQRTLPHVRAWADRYQDRGLVV 132

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EKD++ +R A  ++ I +P+  D    +W   G   WP    V   G++ 
Sbjct: 133 IGVHTPEFSFEKDVDRVRQAAAQFRIDYPIAVDSRRAVWDAFGNRYWPALYFVDARGRIR 192

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG  +  + +++  L+  G K +
Sbjct: 193 HHHFGEGDFERSEKVIQQLLMEAGAKDV 220


>gi|407936737|ref|YP_006852378.1| redoxin domain-containing protein [Acidovorax sp. KKS102]
 gi|407894531|gb|AFU43740.1| Redoxin domain-containing protein [Acidovorax sp. KKS102]
          Length = 193

 Score =  103 bits (256), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL   + L+G+VV++DFWTY CINC+  LP +    ++Y     TVV
Sbjct: 52  PEFTGIERWLNSEPLSLAQ-LRGRVVLVDFWTYACINCIRTLPHVNRWAEQYTPQGLTVV 110

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    +  A+ R+G+ HPV  D     W+      WP   ++   G++  
Sbjct: 111 GVHTPEFPFERPTANVEAAMRRHGVKHPVAQDNRYGTWKAYSNQYWPATYLIDAQGRIRY 170

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           +  GEG  +  + ++   L
Sbjct: 171 KHFGEGEYERTEGVIRTLL 189


>gi|298250043|ref|ZP_06973847.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Ktedonobacter
           racemifer DSM 44963]
 gi|297548047|gb|EFH81914.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Ktedonobacter
           racemifer DSM 44963]
          Length = 230

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEA-------NFLGG 131
           + A++FD DG++ ++E P   +  +++ E  V   + D+LP +GTG +       ++L  
Sbjct: 2   LKAIIFDFDGLVIDTEMPDFTSWQEIYQEHNVTFALTDWLPLVGTGPSTSPFNPYDYL-- 59

Query: 132 VASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD 191
               K  K F+ EA + +  + + +  A   S    PG   LI Q K KGL +AVASS+ 
Sbjct: 60  --EEKSGKSFNREALRMQRMKRHHELIA---SQPVLPGVEALIRQAKEKGLLLAVASSST 114

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           R  V  +L    L +  FDAI   D  ++ KP PD++ SA   L V   E I +ED+L G
Sbjct: 115 RAWVTGHLKERNL-LHYFDAIACGDEVKHAKPQPDVYQSALTQLGVQPHEAIALEDSLNG 173

Query: 252 VQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296
           ++AA+AA + C+ +   L+      +  SL    +  +SL  I T
Sbjct: 174 MRAARAAGIFCVVIPNELT-RHFDFSGASLQLNSLTELSLEHIHT 217


>gi|398957145|ref|ZP_10677128.1| cytochrome c biogenesis protein [Pseudomonas sp. GM33]
 gi|398148822|gb|EJM37489.1| cytochrome c biogenesis protein [Pseudomonas sp. GM33]
          Length = 405

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 10/169 (5%)

Query: 409 ERIQQFVNY-ISDVENRKTTP----IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E + + V+Y +S V+   T       +P     +DW+N+ P      LKGKVV++DFWT+
Sbjct: 231 ETVPKVVDYLVSKVQADSTMGNAQGAMPSLSGAVDWINS-PALTNEALKGKVVLVDFWTF 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ +R+ V  YGI++PV  D 
Sbjct: 290 DCINCKHTLPYVKDWAKKYEKDGLVVIGVHTPEYGFERVIDNVRDKVKEYGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG----HRKDLDDLVEAA 568
           +  +WR      WP   ++   G++     GEG      K +  L+E A
Sbjct: 350 NYAIWRNFDNQYWPAHYIIDAKGQVRYTHFGEGSYDTQEKVIQQLLEEA 398


>gi|351731859|ref|ZP_08949550.1| hypothetical protein AradN_18880 [Acidovorax radicis N35]
          Length = 193

 Score =  103 bits (256), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL   + L+G+VV++DFWTY CINC+  LP +    + Y     TVV
Sbjct: 52  PEFTGIERWLNSEPLTLAQ-LRGRVVLVDFWTYACINCIRTLPHVNRWAELYTPQGLTVV 110

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+    +  A+ R+G+ HPV  D     W+      WP   ++   G++  
Sbjct: 111 GVHTPEFPFERTTSNVEVAMRRHGVKHPVAQDNRYGTWKAYSNQYWPAAYLIDAQGRIRY 170

Query: 551 QLAGEGHRKDLDDLVEAALLFYG 573
           +  GEG  +  + ++ A L   G
Sbjct: 171 KHFGEGEYERTEAVIRALLAARG 193


>gi|325662189|ref|ZP_08150804.1| hypothetical protein HMPREF0490_01542 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331085984|ref|ZP_08335067.1| hypothetical protein HMPREF0987_01370 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471441|gb|EGC74662.1| hypothetical protein HMPREF0490_01542 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406907|gb|EGG86412.1| hypothetical protein HMPREF0987_01370 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 230

 Score =  103 bits (256), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 12/202 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVAS--VK 136
           + AV+FDMDGVL N+E+   +       E+G+ +  E  L        +F G  A   +K
Sbjct: 19  IKAVIFDMDGVLINTEKYLVKYWCQAAEELGMPMKREHALMIR-----SFSGKFAEPWLK 73

Query: 137 GVKG--FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           G+ G  FD  A ++R  EI  +  AK    I  PG  E +N  + KG K+AVA++ DR +
Sbjct: 74  GIYGETFDYVAVRERRKEIMAEHLAKNGVEIK-PGVKETLNYLREKGYKLAVATATDRER 132

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
            +A L   G+   MFD IV A+  EN KP PDI+L A   + V    C+ +ED+  GV++
Sbjct: 133 AEAYLDEIGI-TEMFDRIVCANMVENGKPMPDIYLYACDQIGVKAEACVAVEDSPNGVKS 191

Query: 255 AKAAQMRCIAVTT-TLSEERLK 275
           A  A  R + +   TL +E  K
Sbjct: 192 AYGAGCRVVMIPDLTLPDEETK 213


>gi|330820063|ref|YP_004348925.1| Cytochrome c biogenesis protein, transmembrane region [Burkholderia
           gladioli BSR3]
 gi|327372058|gb|AEA63413.1| Cytochrome c biogenesis protein, transmembrane region [Burkholderia
           gladioli BSR3]
          Length = 695

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 4/158 (2%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P      +WLN+ PL     L+GKVV++DFWTY CINC+  LP ++   +KY++    V+
Sbjct: 378 PSLAGATEWLNSPPLT-NASLRGKVVLVDFWTYSCINCLRTLPYVKAWARKYRNDGLVVI 436

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+D+  ++ A    G+++PV  D   ++WR      WP    +   G++  
Sbjct: 437 GVHAPEFAFERDIGNVKKATHDLGVTYPVAIDNGYSIWRAFNNEYWPAHYFIDAQGRVRY 496

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLE 588
              GEG     +  ++  L+  G     D   +PL ++
Sbjct: 497 HHFGEGDYVQSERAIQQLLVEAGHP---DAAQVPLGID 531


>gi|290975761|ref|XP_002670610.1| predicted protein [Naegleria gruberi]
 gi|284084171|gb|EFC37866.1| predicted protein [Naegleria gruberi]
          Length = 308

 Score =  102 bits (255), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 91/303 (30%), Positives = 147/303 (48%), Gaps = 20/303 (6%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKN 669
           NN ++I+D  ++RI     +GN IV I  +G  G    +G   +A FN P  + + + KN
Sbjct: 21  NNEVYIADFCNHRIRKILENGN-IVTIAGNGNYGFSGDNGPATNAQFNYPCSV-FVSSKN 78

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            +Y+ D  NH +R+I   N  + T+AGNGT G     G    +QL N P  V +   N +
Sbjct: 79  EVYITDYSNHRIRKI-LENGNIITIAGNGTVGFSGDNGPATNAQLYN-PSSV-FVSSNNE 135

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDG-YERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           VYIA    H+I      +G     +G+G Y  + +   + N  F  P  + +S    E+Y
Sbjct: 136 VYIADFCNHRI-RKILENGNIVTIAGNGNYGFSGDNGPATNAQFNYPCSVFVSSK-NEVY 193

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           + D  +  IR + L+ G    +AG   +       F   +G  +   L +P  V+ + N 
Sbjct: 194 ITDYSNHRIRKI-LENGNIITIAGNGTV------GFSGDNGPATNAQLYNPSSVFVSSNN 246

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLF 906
           ++Y  D +N++I+K+    N + T+AG G  GF   +G A  AQL  P  +  + N  ++
Sbjct: 247 EVYFTDQHNNRIRKILENGN-IITIAGNGNYGFSGDNGPATNAQLYNPNSVFVSSNNEVY 305

Query: 907 IAD 909
           I D
Sbjct: 306 ITD 308



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 124/262 (47%), Gaps = 28/262 (10%)

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
           + +  N +Y+AD  NH +R+I   N  + T+AGNG  G     G    +Q  N P  V  
Sbjct: 17  FVSSNNEVYIADFCNHRIRKI-LENGNIVTIAGNGNYGFSGDNGPATNAQF-NYPCSVFV 74

Query: 724 KPINEKVYIAMAGQH---QIWEHSTVDGV----TRAFSGDGYERNLNGSSSLNTSFAQPS 776
              NE VYI     H   +I E+  +  +    T  FSGD      NG ++ N     PS
Sbjct: 75  SSKNE-VYITDYSNHRIRKILENGNIITIAGNGTVGFSGD------NGPAT-NAQLYNPS 126

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
            + +S +  E+Y+AD  +  IR + L+ G    +AG      +  + F   +G  +    
Sbjct: 127 SVFVSSN-NEVYIADFCNHRIRKI-LENGNIVTIAG------NGNYGFSGDNGPATNAQF 178

Query: 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEP 894
            +P  V+ +   ++Y+ D  NH+I+K+    N + T+AG G  GF   +G A  AQL  P
Sbjct: 179 NYPCSVFVSSKNEVYITDYSNHRIRKILENGN-IITIAGNGTVGFSGDNGPATNAQLYNP 237

Query: 895 AGIIEAQNGNLFIADTNNNIIR 916
           + +  + N  ++  D +NN IR
Sbjct: 238 SSVFVSSNNEVYFTDQHNNRIR 259



 Score = 50.8 bits (120), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSE 893
           L +P  V+ + N ++Y+AD  NH+I+K+    N + T+AG G  GF   +G A  AQ + 
Sbjct: 10  LFNPSSVFVSSNNEVYIADFCNHRIRKILENGN-IVTIAGNGNYGFSGDNGPATNAQFNY 68

Query: 894 PAGIIEAQNGNLFIADTNNNIIR 916
           P  +  +    ++I D +N+ IR
Sbjct: 69  PCSVFVSSKNEVYITDYSNHRIR 91


>gi|290977087|ref|XP_002671270.1| predicted protein [Naegleria gruberi]
 gi|284084837|gb|EFC38526.1| predicted protein [Naegleria gruberi]
          Length = 1095

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 179/341 (52%), Gaps = 42/341 (12%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRI-VVTDLDGNFIVQIGSSGEEGLR-DG 649
           D RL  S L  P   A+D L N ++I+D++++R+  ++ LDG  I  I  +G  G   DG
Sbjct: 381 DSRL--SALSKPKGAALDSLGN-IYIADTSNHRVRKISYLDGT-ITTIAGTGSFGYNGDG 436

Query: 650 SF-DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-G 707
                A  N+P G+A+++  N+ Y+AD+ N+ +R+I   N T+ T+AG G  G  Y G G
Sbjct: 437 ILATSAQVNKPTGIAFDSIGNI-YIADSGNNRIRKI-LTNGTILTIAGVGLGG--YNGDG 492

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI------WEHSTVDGVTRAFSGDGYERN 761
              T+  LNSP  V     N+ VYI     H+I         STV G +  F+GD    N
Sbjct: 493 IPATNAKLNSPVSVTVDS-NDLVYITDTYNHRIRLILPSGNISTVIGGSVGFNGDYLLPN 551

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
                  NT    P  I+       +Y+AD+ ++ IR +   T G+ +   G      N 
Sbjct: 552 -------NTKLNYPQSIAFDSS-NNMYIADTYNNRIRKM--FTNGTIITVAGTGTLGYN- 600

Query: 822 FKFGDRDGM-GSEVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
                 DG+  +   L++P G+  A +G ++ +ADSYN++I+++    N ++T+ G G  
Sbjct: 601 -----GDGIEATNAQLKYPQGI--AIDGDELLIADSYNNRIRRVLSNGN-ITTITGTGDL 652

Query: 880 GF-KDGA-ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           G+ +DG  A A++++ P+G+I  +NG + + D++N+ +R +
Sbjct: 653 GYSEDGTTASASKINNPSGVILRRNGEIIVIDSDNSRLRVI 693



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 149/315 (47%), Gaps = 29/315 (9%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           ++ SDSN  R V T+  G      G+S      + + + AT   P+ + +    + LY+A
Sbjct: 292 VYFSDSNRIRKVSTN--GTITTFAGTSLYGFTDNTTVNLATLASPELMNFAKNTSDLYIA 349

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL--LNSPWDVCYKPINEKVYI 732
           D  NH +R+I   N  + T+AG   +GS    GE   S+L  L+ P       +   +YI
Sbjct: 350 DKGNHRIRKIS--NGFITTIAG---QGSPSYCGENVDSRLSALSKPKGAALDSLGN-IYI 403

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDG-YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           A    H++ + S +DG     +G G +  N +G  + +    +P+GI+       IY+AD
Sbjct: 404 ADTSNHRVRKISYLDGTITTIAGTGSFGYNGDGILATSAQVNKPTGIAFDS-IGNIYIAD 462

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG---SEVLLQHPLGVYCAKNG 848
           S ++ IR + L  G    +AG            G  +G G   +   L  P+ V    N 
Sbjct: 463 SGNNRIRKI-LTNGTILTIAG---------VGLGGYNGDGIPATNAKLNSPVSVTVDSND 512

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL--AAQLSEPAGIIEAQNGNLF 906
            +Y+ D+YNH+I+ + P+ N +ST+ G G  GF     L    +L+ P  I    + N++
Sbjct: 513 LVYITDTYNHRIRLILPSGN-ISTVIG-GSVGFNGDYLLPNNTKLNYPQSIAFDSSNNMY 570

Query: 907 IADTNNNIIRYLDLN 921
           IADT NN IR +  N
Sbjct: 571 IADTYNNRIRKMFTN 585



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 26/327 (7%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF--DDATFNRPQGLAYNAKKNLLY 672
           L  +D N+NRI     +G  I+ +  S  +G    +     AT     G+A + K N+ Y
Sbjct: 180 LLFTDVNNNRIRQVFNNGT-IITVAGSNSQGYNGDNMKATSATLFLSFGVAVDTKDNI-Y 237

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           +ADT N+ +R++  +N T+ T+AG GT      G    T   +NSP+ V    + E   +
Sbjct: 238 IADTNNNRIRKV-LLNGTIVTIAGTGTGDYYGDG-GLATLAKINSPYGVAVSSLGE---V 292

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDG-YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
             +  ++I + ST +G    F+G   Y    N + +L T  A P  ++ + +  ++Y+AD
Sbjct: 293 YFSDSNRIRKVST-NGTITTFAGTSLYGFTDNTTVNLAT-LASPELMNFAKNTSDLYIAD 350

Query: 792 SESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEV-LLQHPLGVYCAKNGQ 849
             +  IR +    G    +AG G P +          + + S +  L  P G      G 
Sbjct: 351 KGNHRIRKI--SNGFITTIAGQGSPSYCG--------ENVDSRLSALSKPKGAALDSLGN 400

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEPAGIIEAQNGNLFI 907
           IY+AD+ NH+++K+      ++T+AG G  G+     LA  AQ+++P GI     GN++I
Sbjct: 401 IYIADTSNHRVRKISYLDGTITTIAGTGSFGYNGDGILATSAQVNKPTGIAFDSIGNIYI 460

Query: 908 ADTNNNIIRYLDLNKEEPELQTLELKG 934
           AD+ NN IR +  N     +  + L G
Sbjct: 461 ADSGNNRIRKILTNGTILTIAGVGLGG 487



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 86/371 (23%)

Query: 615 LFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLR-------------------- 647
           LFI+DSN++RI        +T + G         G E +R                    
Sbjct: 68  LFIADSNNHRIRQVFPNGTITTIAGTGFSGYNGDGIEAIRAQLKNPVSVVVNSMGEVLFS 127

Query: 648 ------------------------------DGSFDDATFNRPQGLAYNAKKNLLYVADTE 677
                                         +G   +A  N P GL  N+K+ LL+  D  
Sbjct: 128 DNGNNRIRKILTNGTIITIVGTGVDSFSGDNGLARNAAINYPYGLTLNSKEELLFT-DVN 186

Query: 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNSPWDVCYKPINEKVYIAMAG 736
           N+ +R++ F N T+ T+AG+ ++G  Y G   K TS  L   + V      + +YIA   
Sbjct: 187 NNRIRQV-FNNGTIITVAGSNSQG--YNGDNMKATSATLFLSFGVAVDT-KDNIYIADTN 242

Query: 737 QHQIWE---HSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793
            ++I +   + T+  VT A +G G      G ++L      P G+++S    E+Y +DS 
Sbjct: 243 NNRIRKVLLNGTI--VTIAGTGTGDYYGDGGLATL-AKINSPYGVAVSS-LGEVYFSDSN 298

Query: 794 SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVA 853
               R   + T G+     G       L+ F D   +    L    L  +      +Y+A
Sbjct: 299 ----RIRKVSTNGTITTFAGTS-----LYGFTDNTTVNLATLASPELMNFAKNTSDLYIA 349

Query: 854 DSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIEAQNGNLFIADTN 911
           D  NH+I+K+  ++  ++T+AG G   +  ++  +  + LS+P G      GN++IADT+
Sbjct: 350 DKGNHRIRKI--SNGFITTIAGQGSPSYCGENVDSRLSALSKPKGAALDSLGNIYIADTS 407

Query: 912 NNIIR---YLD 919
           N+ +R   YLD
Sbjct: 408 NHRVRKISYLD 418



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 146/355 (41%), Gaps = 71/355 (20%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           L++AD+ NH +R++ F N T+ T+AG G  G +  G E   +QL N P  V    + E V
Sbjct: 68  LFIADSNNHRIRQV-FPNGTITTIAGTGFSGYNGDGIEAIRAQLKN-PVSVVVNSMGE-V 124

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL--NTSFAQPSGISLSPD----F 784
             +  G ++I +  T +G      G G +   +G + L  N +   P G++L+      F
Sbjct: 125 LFSDNGNNRIRKILT-NGTIITIVGTGVDS-FSGDNGLARNAAINYPYGLTLNSKEELLF 182

Query: 785 ME---------------IYVADSESSSIRALNLK-TGGSRLLAGGDPI-FPDNLFKFGDR 827
            +               I VA S S      N+K T  +  L+ G  +   DN++     
Sbjct: 183 TDVNNNRIRQVFNNGTIITVAGSNSQGYNGDNMKATSATLFLSFGVAVDTKDNIYIADTN 242

Query: 828 DGMGSEVLL---------------------------QHPLGVYCAKNGQIYVADSYNHKI 860
           +    +VLL                             P GV  +  G++Y +DS  ++I
Sbjct: 243 NNRIRKVLLNGTIVTIAGTGTGDYYGDGGLATLAKINSPYGVAVSSLGEVYFSDS--NRI 300

Query: 861 KKLDPASNRVSTLAGIGKAGFKDGAAL-AAQLSEPAGIIEAQN-GNLFIADTNNNIIRYL 918
           +K+   +  ++T AG    GF D   +  A L+ P  +  A+N  +L+IAD  N+ IR +
Sbjct: 301 RKV-STNGTITTFAGTSLYGFTDNTTVNLATLASPELMNFAKNTSDLYIADKGNHRIRKI 359

Query: 919 DLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYL 973
                   + T+  +G  P         RL   S P          L + GNIY+
Sbjct: 360 ----SNGFITTIAGQG-SPSYCGENVDSRLSALSKPKGAA------LDSLGNIYI 403



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-A 886
           G+  +  L +P       +G +++ADS NH+I+++ P +  ++T+AG G +G+  DG  A
Sbjct: 47  GLAIKASLANPASSALGPDGSLFIADSNNHRIRQVFP-NGTITTIAGTGFSGYNGDGIEA 105

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           + AQL  P  ++    G +  +D  NN IR +  N
Sbjct: 106 IRAQLKNPVSVVVNSMGEVLFSDNGNNRIRKILTN 140



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
           G  ++  S A P+  +L PD   +++ADS +  IR +    G    +AG           
Sbjct: 46  GGLAIKASLANPASSALGPD-GSLFIADSNNHRIRQV-FPNGTITTIAG---------TG 94

Query: 824 FGDRDGMGSEVL---LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
           F   +G G E +   L++P+ V     G++  +D+ N++I+K+   +  + T+ G G   
Sbjct: 95  FSGYNGDGIEAIRAQLKNPVSVVVNSMGEVLFSDNGNNRIRKI-LTNGTIITIVGTGVDS 153

Query: 881 FK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           F   +G A  A ++ P G+       L   D NNN IR
Sbjct: 154 FSGDNGLARNAAINYPYGLTLNSKEELLFTDVNNNRIR 191


>gi|290975266|ref|XP_002670364.1| predicted protein [Naegleria gruberi]
 gi|284083922|gb|EFC37620.1| predicted protein [Naegleria gruberi]
          Length = 1584

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 138/259 (53%), Gaps = 34/259 (13%)

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-------GGEKGTSQLLNSP-WDVCYK 724
           + DT+N  +R+I F+N T+ TL  N   G+ ++         E   + +LN     VC  
Sbjct: 86  IVDTQNGRIRKI-FMNGTIFTLPINMQTGNKFKPTMAVLFRNELYMTDVLNHRILSVC-- 142

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
            ++  +   ++G+    EHS  DG    FSGDG    L   + LN+    P+G+S+S + 
Sbjct: 143 -LSRYLVTIVSGKQNCNEHSDCDG----FSGDG---GLASRAKLNS----PNGLSISQN- 189

Query: 785 MEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
            EIY+AD+ +  IR +N     S +   G          FG   G      L  P GV+ 
Sbjct: 190 GEIYIADTLNHRIRKINSYGVISTIAGTGRA-------SFGGDGGFAVLSQLNSPNGVHI 242

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIEAQN 902
           ++NG+IY+AD+ NH+I+K++ +   +ST+AG G+A F    G A+ +QL+ P G+  +QN
Sbjct: 243 SQNGEIYIADTLNHRIRKIN-SYGVISTVAGTGRASFGGDGGLAINSQLNSPYGVHVSQN 301

Query: 903 GNLFIADTNNNIIRYLDLN 921
           G ++IADT N+ IR + +N
Sbjct: 302 GEIYIADTLNHRIRKIFVN 320



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 136/258 (52%), Gaps = 32/258 (12%)

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-------GGEKGTSQLLNSPWDVCYKP 725
           + DT+N  +R+I F+N T+ TL  N   G+ ++         E   + +LN    +    
Sbjct: 481 IIDTQNGRIRKI-FMNGTIFTLPINMQTGNKFKPTVAVLFRNELYMTDVLNH--RILSVS 537

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
           ++  +   ++G+     HS  DG    FSGDG    L   + LN+    P+G+S+S +  
Sbjct: 538 LSSYLVTIVSGKQNCNGHSDCDG----FSGDG---GLASRAKLNS----PNGLSISQN-G 585

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           EIY+AD+ +  IR +N     S +   G          FG   G      L  P GV+ +
Sbjct: 586 EIYIADTLNHRIRKINSYGVISTIAGTGRA-------SFGGDGGFAVLSQLNSPNGVHIS 638

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIEAQNG 903
           +NG+IY+AD+ NH+I+K++ +   +ST+AG G+A F    G A+ +QL+ P G+  +QNG
Sbjct: 639 QNGEIYIADTLNHRIRKIN-SYGVISTVAGTGRASFGGDGGLAINSQLNSPYGVHVSQNG 697

Query: 904 NLFIADTNNNIIRYLDLN 921
            ++IADT N+ IR + +N
Sbjct: 698 EIYIADTLNHRIRKIFVN 715



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 132/267 (49%), Gaps = 32/267 (11%)

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAG----NGTKGSDYQGGEKGTSQL--LNSPWDV 721
           +N LY+ D  NH +  +   +  V  ++G    NG    D   G+ G +    LNSP  +
Sbjct: 520 RNELYMTDVLNHRILSVSLSSYLVTIVSGKQNCNGHSDCDGFSGDGGLASRAKLNSPNGL 579

Query: 722 CYKPINEKVYIAMAGQHQIWEH------STVDGVTRA-FSGDGYERNLNGSSSLNTSFAQ 774
                N ++YIA    H+I +       ST+ G  RA F GDG    L   S LN+    
Sbjct: 580 SISQ-NGEIYIADTLNHRIRKINSYGVISTIAGTGRASFGGDGGFAVL---SQLNS---- 631

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P+G+ +S +  EIY+AD+ +  IR +N     S +   G          FG   G+    
Sbjct: 632 PNGVHISQN-GEIYIADTLNHRIRKINSYGVISTVAGTGRA-------SFGGDGGLAINS 683

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKL--DPASNRVSTLAGIGKAGFKDGAALAAQLS 892
            L  P GV+ ++NG+IY+AD+ NH+I+K+  +     ++  +  G  G   G ++A++L+
Sbjct: 684 QLNSPYGVHVSQNGEIYIADTLNHRIRKIFVNGTITTIAGSSSDGSFGGDGGLSIASRLN 743

Query: 893 EPAGIIEAQNGN-LFIADTNNNIIRYL 918
            P G+  + N N + IADT+NN IR +
Sbjct: 744 SPKGVFVSPNNNEILIADTSNNRIRKI 770



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 32/267 (11%)

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAG--NGTKGSDYQG--GEKGTSQL--LNSPWDV 721
           +N LY+ D  NH +  +      V  ++G  N  + SD  G  G+ G +    LNSP  +
Sbjct: 125 RNELYMTDVLNHRILSVCLSRYLVTIVSGKQNCNEHSDCDGFSGDGGLASRAKLNSPNGL 184

Query: 722 CYKPINEKVYIAMAGQHQIWEH------STVDGVTRA-FSGDGYERNLNGSSSLNTSFAQ 774
                N ++YIA    H+I +       ST+ G  RA F GDG    L   S LN+    
Sbjct: 185 SISQ-NGEIYIADTLNHRIRKINSYGVISTIAGTGRASFGGDGGFAVL---SQLNS---- 236

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P+G+ +S +  EIY+AD+ +  IR +N     S +   G          FG   G+    
Sbjct: 237 PNGVHISQN-GEIYIADTLNHRIRKINSYGVISTVAGTGRA-------SFGGDGGLAINS 288

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKL--DPASNRVSTLAGIGKAGFKDGAALAAQLS 892
            L  P GV+ ++NG+IY+AD+ NH+I+K+  +     ++  +  G  G   G ++A++L+
Sbjct: 289 QLNSPYGVHVSQNGEIYIADTLNHRIRKIFVNGTITTIAGSSSDGSFGGDGGLSIASRLN 348

Query: 893 EPAGIIEAQNGN-LFIADTNNNIIRYL 918
            P G+  + N N + IADT+NN IR +
Sbjct: 349 SPKGVFVSPNNNEILIADTSNNRIRKI 375



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 61/316 (19%)

Query: 574 KKKLLDNT--PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLD 631
           +K  ++ T   LP++++  N         KF   +A+ +  N L+++D  ++RI+   L 
Sbjct: 490 RKIFMNGTIFTLPINMQTGN---------KFKPTVAV-LFRNELYMTDVLNHRILSVSLS 539

Query: 632 GNFIVQI--------------GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677
            +++V I              G SG+ GL       A  N P GL+  ++   +Y+ADT 
Sbjct: 540 -SYLVTIVSGKQNCNGHSDCDGFSGDGGLAS----RAKLNSPNGLSI-SQNGEIYIADTL 593

Query: 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ 737
           NH +R+I+     + T+AG G       GG    SQL NSP  V +   N ++YIA    
Sbjct: 594 NHRIRKINSY-GVISTIAGTGRASFGGDGGFAVLSQL-NSPNGV-HISQNGEIYIADTLN 650

Query: 738 HQIWEH------STVDGVTRA-FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           H+I +       STV G  RA F GDG         ++N+    P G+ +S +  EIY+A
Sbjct: 651 HRIRKINSYGVISTVAGTGRASFGGDG-------GLAINSQLNSPYGVHVSQN-GEIYIA 702

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL--LQHPLGVYCA-KN 847
           D+ +  IR +         + G       +          G  +   L  P GV+ +  N
Sbjct: 703 DTLNHRIRKI--------FVNGTITTIAGSSSDGSFGGDGGLSIASRLNSPKGVFVSPNN 754

Query: 848 GQIYVADSYNHKIKKL 863
            +I +AD+ N++I+K+
Sbjct: 755 NEILIADTSNNRIRKI 770



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 61/316 (19%)

Query: 574 KKKLLDNT--PLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLD 631
           +K  ++ T   LP++++  N         KF   +A+ +  N L+++D  ++RI+   L 
Sbjct: 95  RKIFMNGTIFTLPINMQTGN---------KFKPTMAV-LFRNELYMTDVLNHRILSVCLS 144

Query: 632 GNFIVQI--------------GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677
             ++V I              G SG+ GL       A  N P GL+  ++   +Y+ADT 
Sbjct: 145 -RYLVTIVSGKQNCNEHSDCDGFSGDGGLAS----RAKLNSPNGLSI-SQNGEIYIADTL 198

Query: 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ 737
           NH +R+I+     + T+AG G       GG    SQL NSP  V +   N ++YIA    
Sbjct: 199 NHRIRKINSY-GVISTIAGTGRASFGGDGGFAVLSQL-NSPNGV-HISQNGEIYIADTLN 255

Query: 738 HQIWEH------STVDGVTRA-FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           H+I +       STV G  RA F GDG         ++N+    P G+ +S +  EIY+A
Sbjct: 256 HRIRKINSYGVISTVAGTGRASFGGDG-------GLAINSQLNSPYGVHVSQN-GEIYIA 307

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL--LQHPLGVYCA-KN 847
           D+ +  IR +         + G       +          G  +   L  P GV+ +  N
Sbjct: 308 DTLNHRIRKI--------FVNGTITTIAGSSSDGSFGGDGGLSIASRLNSPKGVFVSPNN 359

Query: 848 GQIYVADSYNHKIKKL 863
            +I +AD+ N++I+K+
Sbjct: 360 NEILIADTSNNRIRKI 375


>gi|423081183|ref|ZP_17069795.1| HAD hydrolase, family IA, variant 3 [Clostridium difficile
           002-P50-2011]
 gi|423084943|ref|ZP_17073401.1| HAD hydrolase, family IA, variant 3 [Clostridium difficile
           050-P50-2011]
 gi|357551143|gb|EHJ32945.1| HAD hydrolase, family IA, variant 3 [Clostridium difficile
           050-P50-2011]
 gi|357551492|gb|EHJ33282.1| HAD hydrolase, family IA, variant 3 [Clostridium difficile
           002-P50-2011]
          Length = 226

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 7/190 (3%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV-- 135
           KV  ++FDMDGVL +SE  S    ++ F + G  +T E +   MG      + G+ ++  
Sbjct: 3   KVEGIIFDMDGVLFDSERISLEFWMETFEKYGYTMTKEIYTSVMGRNRKGIIEGLTNIYD 62

Query: 136 KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
             V   D    K +    ++++   P       G  ELI+  K  G K+AVA+S  R + 
Sbjct: 63  SSVPIIDLYDEKTKNMIEFMERKGAPIK----LGVNELISFLKENGYKMAVATSTKRERA 118

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
              LA A L    FDAIV  D   N KP P+IFL A+K +NV    CIVIED+  GV+AA
Sbjct: 119 VKRLAKANLK-DCFDAIVCGDDVVNSKPNPEIFLKAAKKINVNPKNCIVIEDSPMGVEAA 177

Query: 256 KAAQMRCIAV 265
               +RCI V
Sbjct: 178 YNGGIRCINV 187


>gi|254976461|ref|ZP_05272933.1| putative hydrolase [Clostridium difficile QCD-66c26]
 gi|255093845|ref|ZP_05323323.1| putative hydrolase [Clostridium difficile CIP 107932]
 gi|255315597|ref|ZP_05357180.1| putative hydrolase [Clostridium difficile QCD-76w55]
 gi|255518257|ref|ZP_05385933.1| putative hydrolase [Clostridium difficile QCD-97b34]
 gi|255651376|ref|ZP_05398278.1| putative hydrolase [Clostridium difficile QCD-37x79]
 gi|260684434|ref|YP_003215719.1| hydrolase [Clostridium difficile CD196]
 gi|260688093|ref|YP_003219227.1| hydrolase [Clostridium difficile R20291]
 gi|306521205|ref|ZP_07407552.1| putative hydrolase [Clostridium difficile QCD-32g58]
 gi|384362082|ref|YP_006199934.1| hydrolase [Clostridium difficile BI1]
 gi|260210597|emb|CBA65203.1| putative hydrolase [Clostridium difficile CD196]
 gi|260214110|emb|CBE06301.1| putative hydrolase [Clostridium difficile R20291]
          Length = 226

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 96/190 (50%), Gaps = 7/190 (3%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV-- 135
           KV  ++FDMDGVL +SE  S    ++ F + G  +T E +   MG      + G+  +  
Sbjct: 3   KVEGIIFDMDGVLFDSERISLEFWMETFEKYGYTMTKEIYTSVMGRNRKGIIEGLTDIYD 62

Query: 136 KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
             V   D    K +    ++++   P       G  ELI+  K  G K+AVA+S  R + 
Sbjct: 63  SSVPIIDLYDEKTKNMIEFMERKGAPIK----LGVNELISFLKENGYKMAVATSTKRERA 118

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
              LA A L    FDAIV  D   N KP P+IFL A+K +NV    CIVIED+  GV+AA
Sbjct: 119 VKRLAKANLK-DYFDAIVCGDDVVNSKPNPEIFLKAAKKINVNPQNCIVIEDSPMGVEAA 177

Query: 256 KAAQMRCIAV 265
               +RCI V
Sbjct: 178 YNGGIRCINV 187


>gi|197295555|ref|YP_002154096.1| putative cytochrome c biogenesis protein [Burkholderia cenocepacia
           J2315]
 gi|195945034|emb|CAR57659.1| putative cytochrome c biogenesis protein [Burkholderia cenocepacia
           J2315]
          Length = 619

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 2/156 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 301 LPSLDGAVQWLNSPPLT-AAGLRGKVVLIDFWTYSCINCLRTLPYTTAWARKYAPYGLVV 359

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    +   G++ 
Sbjct: 360 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFNNEYWPAHYFIDAQGRIR 419

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
               GEG     +  +++ L   G    L N PL L
Sbjct: 420 HHHFGEGEYAQSERAIQSLLAEAGHPDAL-NVPLGL 454


>gi|406929359|gb|EKD64958.1| hypothetical protein ACD_50C00231G0002 [uncultured bacterium]
          Length = 575

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE      W N+ PL  +  L+GKVV++DFWTY CINC    P L    +KYKD    ++
Sbjct: 276 PEIIPGGSWFNSDPLTVK-SLRGKVVIVDFWTYSCINCQRTFPYLRQWWEKYKDKGLVIL 334

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVHS +F+ EK+ + +R A+  + + +P+V D +   WR      WP    +  +G +  
Sbjct: 335 GVHSPEFEFEKNQDNVRKAISDFALEYPIVQDNNFATWRAYSNRYWPAKYFIDKDGYIRY 394

Query: 551 QLAGEGHRKDLDDLVEAALL 570
              GEG   + + +++  L+
Sbjct: 395 SHFGEGAYDESEKVIQELLM 414


>gi|444351375|ref|YP_007387519.1| FIG00731668: hypothetical protein [Enterobacter aerogenes EA1509E]
 gi|443902205|emb|CCG29979.1| FIG00731668: hypothetical protein [Enterobacter aerogenes EA1509E]
          Length = 396

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 402 EGGSSQSERIQQFVNYI--SDVENRKTTPIV--------PEFPAKLDWLNTAPLQFRRDL 451
           +G S  +  ++Q ++     D +  +  PIV        PE      W+N  PL     L
Sbjct: 215 QGASGLTHHLEQRLSAFMPQDQQRVRLEPIVAPRPTSAMPELQGGTAWINNPPLT-NAAL 273

Query: 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVL 511
           KGKVV++DFWT  CINC H LP +     KY+D    V+GVH+ ++  E+ L  +R AV 
Sbjct: 274 KGKVVLIDFWTRDCINCQHTLPYVRAWANKYRDAGLVVIGVHTPEYPWERSLPQLREAVS 333

Query: 512 RYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           +  +++PVV D +  +W   G   WP   +    G+L     GEG     + +++  L
Sbjct: 334 QRQLNYPVVADNNYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQLL 391


>gi|126700473|ref|YP_001089370.1| hydrolase, HAD superfamily, IA subfamily [Clostridium difficile
           630]
 gi|255102031|ref|ZP_05331008.1| putative hydrolase [Clostridium difficile QCD-63q42]
 gi|255307899|ref|ZP_05352070.1| putative hydrolase [Clostridium difficile ATCC 43255]
 gi|115251910|emb|CAJ69745.1| putative hydrolase, HAD superfamily, IA subfamily [Clostridium
           difficile 630]
          Length = 226

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 98/193 (50%), Gaps = 13/193 (6%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGV----- 132
           KV  ++FDMDGVL +SE  S    ++ F + G  +T E +   MG      + G+     
Sbjct: 3   KVEGIIFDMDGVLFDSERISLEFWMETFEKYGYTMTKEIYTSVMGRNRKGIIEGLTDIYD 62

Query: 133 ASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADR 192
           +SV  +  +D +   K   E    K A    G+      ELI+  K  G K+AVA+S  R
Sbjct: 63  SSVPIIDLYDEKT--KNMIEFMERKGAPIKLGVN-----ELISFLKENGYKMAVATSTKR 115

Query: 193 IKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252
            +    LA A L    FDAIV  D   N KP P+IFL A+K +NV    CIVIED+  GV
Sbjct: 116 ERAVKRLAKANLK-DYFDAIVCGDDVVNSKPNPEIFLKAAKKINVNPKNCIVIEDSPMGV 174

Query: 253 QAAKAAQMRCIAV 265
           +AA    +RCI V
Sbjct: 175 EAAYNGGIRCINV 187


>gi|116622401|ref|YP_824557.1| Ig domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225563|gb|ABJ84272.1| Ig domain protein, group 1 domain protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 2770

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 26/322 (8%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDD------ATFNRPQGLAYN 665
           N  L+I+D+ ++RI   D +G  I  +  +G+     G  +D      A  N P G+A++
Sbjct: 59  NGDLYIADTYNHRIRKVDKNG-VITTVAGTGQATNVGGDANDNILAVSAELNHPSGIAFD 117

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYK 724
              NL Y+ADT +  +R +D V   + T+AG G +G  Y G G+  T   +NSP+ +   
Sbjct: 118 TAGNL-YIADTGHDRIRRVDGVTGIITTVAGTGERG--YSGDGQPATLAKINSPYHIALD 174

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNG--SSSLNTSFAQPSGISLSP 782
             +  ++IA  G H++       GV    +G G     NG    + +     P G+ +  
Sbjct: 175 G-HGNLFIADDGNHRVRRVDGNSGVITTVAGTG-NAGYNGDDQQATHADLQNPRGVLIDA 232

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
               +Y+AD  +  +R ++  TG     AG        ++ F    G      L+ P+G+
Sbjct: 233 S-GNLYIADYGNHRVRVVD-ATGVIHTFAG------TGVYGFSGDGGAAMAANLKGPIGL 284

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEA 900
                G IYVAD  + ++++++  +  +ST+ G G++G+    G A  A +S  +   +A
Sbjct: 285 GTDAAGNIYVADGQDQRVRQVNIQTRVISTVVGNGQSGYSGDGGPATDATISSASATFDA 344

Query: 901 QNGNLFIADTNNNIIRYLDLNK 922
             G ++IA   +N+IR ++ N 
Sbjct: 345 -TGRIYIAQYGSNVIRSVEPNH 365



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 31/244 (12%)

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD-- 747
           T+ T+AG G +G     G    ++L + P DV   P N  +YIA    H+I +   VD  
Sbjct: 24  TISTVAGTGIQGFSGDSGPATAARLFD-PTDVAIHP-NGDLYIADTYNHRIRK---VDKN 78

Query: 748 GVTRAFSGDGYERNLNGSS-----SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
           GV    +G G   N+ G +     +++     PSGI+       +Y+AD+    IR ++ 
Sbjct: 79  GVITTVAGTGQATNVGGDANDNILAVSAELNHPSGIAFD-TAGNLYIADTGHDRIRRVDG 137

Query: 803 KTGGSRLLAGGDPIFPDNLFKFGDR----DGMGSEVL-LQHPLGVYCAKNGQIYVADSYN 857
            TG    +AG            G+R    DG  + +  +  P  +    +G +++AD  N
Sbjct: 138 VTGIITTVAG-----------TGERGYSGDGQPATLAKINSPYHIALDGHGNLFIADDGN 186

Query: 858 HKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNII 915
           H+++++D  S  ++T+AG G AG+   D  A  A L  P G++   +GNL+IAD  N+ +
Sbjct: 187 HRVRRVDGNSGVITTVAGTGNAGYNGDDQQATHADLQNPRGVLIDASGNLYIADYGNHRV 246

Query: 916 RYLD 919
           R +D
Sbjct: 247 RVVD 250



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 14/182 (7%)

Query: 744 STVDGV-TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
           STV G   + FSGD      +G ++    F  P+ +++ P+  ++Y+AD+ +  IR ++ 
Sbjct: 26  STVAGTGIQGFSGD------SGPATAARLF-DPTDVAIHPN-GDLYIADTYNHRIRKVD- 76

Query: 803 KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
           K G    +AG       N+    + + +     L HP G+     G +Y+AD+ + +I++
Sbjct: 77  KNGVITTVAGTGQA--TNVGGDANDNILAVSAELNHPSGIAFDTAGNLYIADTGHDRIRR 134

Query: 863 LDPASNRVSTLAGIGKAGFK-DG-AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           +D  +  ++T+AG G+ G+  DG  A  A+++ P  I    +GNLFIAD  N+ +R +D 
Sbjct: 135 VDGVTGIITTVAGTGERGYSGDGQPATLAKINSPYHIALDGHGNLFIADDGNHRVRRVDG 194

Query: 921 NK 922
           N 
Sbjct: 195 NS 196


>gi|134290946|ref|YP_001114715.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           vietnamiensis G4]
 gi|134134135|gb|ABO58460.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           vietnamiensis G4]
          Length = 622

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP       KY      V
Sbjct: 304 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTSAWAHKYARYGLVV 362

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+++  ++ AV   GI +PV  D    +WR      WP    V   G++ 
Sbjct: 363 IGVHAPEFAFERNVGNVKKAVHDLGIDYPVAIDNGYAIWRAFDNEYWPAHYFVDAQGRIR 422

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG     +  ++A L   G  + L N PL L+
Sbjct: 423 HHHFGEGEYAQSERTIQALLADAGHPEAL-NVPLGLT 458


>gi|170735215|ref|YP_001774329.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           cenocepacia MC0-3]
 gi|169821253|gb|ACA95834.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           cenocepacia MC0-3]
          Length = 619

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 2/156 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 301 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWARKYAPYGLVV 359

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D   ++WR      WP    +   G++ 
Sbjct: 360 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYSIWRAFNNEYWPAHYFIDAQGRVR 419

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
               GEG     +  +++ L   G    L N PL L
Sbjct: 420 HHHFGEGEYVQSERAIQSLLAEAGHPDAL-NVPLGL 454


>gi|107023138|ref|YP_621465.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           cenocepacia AU 1054]
 gi|116686622|ref|YP_839869.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           cenocepacia HI2424]
 gi|105893327|gb|ABF76492.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           cenocepacia AU 1054]
 gi|116652337|gb|ABK12976.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           cenocepacia HI2424]
          Length = 619

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 2/156 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 301 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWARKYAPYGLVV 359

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D   ++WR      WP    +   G++ 
Sbjct: 360 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYSIWRAFNNEYWPAHYFIDAQGRVR 419

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
               GEG     +  +++ L   G    L N PL L
Sbjct: 420 HHHFGEGEYVQSERAIQSLLAEAGHPDAL-NVPLGL 454


>gi|398978635|ref|ZP_10687958.1| cytochrome c biogenesis protein [Pseudomonas sp. GM25]
 gi|398137035|gb|EJM26109.1| cytochrome c biogenesis protein [Pseudomonas sp. GM25]
          Length = 404

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 7/167 (4%)

Query: 409 ERIQQFVNY-ISDV-----ENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT 462
           E + + V+Y +S V     E+      +P     + WLN+  L     L+GKVV++DFWT
Sbjct: 231 ENVPKVVDYFVSKVRADSTEDEAGKGAMPSLSGAVQWLNSPELT-AESLRGKVVLVDFWT 289

Query: 463 YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           Y CINC H LP ++  EKKY      V+GVH+ ++  E+ ++ +++ V + GI++PV  D
Sbjct: 290 YDCINCQHTLPYVKEWEKKYGKDGLVVIGVHTPEYGYERIIDNVKDQVKKLGITYPVAID 349

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            +  +WR      WP   +V   G++     GEG  +  + +++  L
Sbjct: 350 NNYAIWRNFDNQYWPAHYLVDAKGQVRYTHFGEGSYQAQEQMIQQLL 396


>gi|290973961|ref|XP_002669715.1| predicted protein [Naegleria gruberi]
 gi|284083266|gb|EFC36971.1| predicted protein [Naegleria gruberi]
          Length = 710

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 51/319 (15%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF--DDATFNRPQGLAYNAKKN 669
           NN +FI+D ++  I     +GN IV I  +G++G    +     A  N P G+       
Sbjct: 19  NNEVFIADYSNQSIRKVLQNGN-IVTIAGNGDKGFSGDNCLATSAQLNNPIGV------- 70

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG--TSQLLNSPWDVCYKPIN 727
             +V+      L+     N T+ T+AGNG  G    GG+ G  T+  LN P +V Y   N
Sbjct: 71  --FVSSIMKKILQ-----NGTIVTIAGNGKPGF---GGDNGLATNAQLNYPRNV-YVSSN 119

Query: 728 EKVYIA-MAGQH--QIWEHSTVDGV----TRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
            +VYIA    Q   ++ ++  +  +    T+ FSGD      NG ++ N     P+G+ +
Sbjct: 120 NEVYIADFCNQRIRKVLQNGNIITIAGNGTKGFSGD------NGPAT-NAQLNGPAGVFV 172

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           S +  E+Y+AD  +  IR ++ + G    +AG G P F       GD +G+ +   L +P
Sbjct: 173 SNN--EVYIADYSNHVIRKIS-QNGTIVTIAGNGKPGFS------GD-NGLATNAQLYNP 222

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGI 897
            G + + N ++Y++D +NH I+K+   +  + T+AG GK GF   +G A  AQL  P G+
Sbjct: 223 SGTFVSSNNEVYISDCFNHVIRKI-LQNGTIVTIAGNGKGGFSGDNGLATNAQLYSPLGV 281

Query: 898 IEAQNGNLFIADTNNNIIR 916
             + N  ++I+D  N+ IR
Sbjct: 282 FVSSNNEVYISDCFNHRIR 300



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 20/251 (7%)

Query: 635 IVQIGSSGEEGL--RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692
           IV I  +G+ G    +G   +A  N P+ + Y +  N +Y+AD  N  +R++   N  + 
Sbjct: 85  IVTIAGNGKPGFGGDNGLATNAQLNYPRNV-YVSSNNEVYIADFCNQRIRKV-LQNGNII 142

Query: 693 TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
           T+AGNGTKG     G    +QL N P  V     N +VYIA    H I + S  +G    
Sbjct: 143 TIAGNGTKGFSGDNGPATNAQL-NGPAGVFVS--NNEVYIADYSNHVIRKISQ-NGTIVT 198

Query: 753 FSGDGYERNLNGSSSL--NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
            +G+G +   +G + L  N     PSG  +S +  E+Y++D  +  IR + L+ G    +
Sbjct: 199 IAGNG-KPGFSGDNGLATNAQLYNPSGTFVSSN-NEVYISDCFNHVIRKI-LQNGTIVTI 255

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AG           F   +G+ +   L  PLGV+ + N ++Y++D +NH+I+K+    N V
Sbjct: 256 AGNGK------GGFSGDNGLATNAQLYSPLGVFVSSNNEVYISDCFNHRIRKVLHNGNIV 309

Query: 871 STLAGIGKAGF 881
            T+AG G  GF
Sbjct: 310 -TIAGNGTPGF 319



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 32/267 (11%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTS 712
           A  N P  + + +  N +++AD  N ++R++   N  + T+AGNG KG  + G     TS
Sbjct: 6   AQLNNPFSV-FVSSNNEVFIADYSNQSIRKV-LQNGNIVTIAGNGDKG--FSGDNCLATS 61

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR-AFSGDGYERNLNGSSSLNTS 771
             LN+P  V    I +K+        Q     T+ G  +  F GD      NG ++ N  
Sbjct: 62  AQLNNPIGVFVSSIMKKIL-------QNGTIVTIAGNGKPGFGGD------NGLAT-NAQ 107

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
              P  + +S +  E+Y+AD  +  IR + L+ G    +AG      +    F   +G  
Sbjct: 108 LNYPRNVYVSSN-NEVYIADFCNQRIRKV-LQNGNIITIAG------NGTKGFSGDNGPA 159

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAA 889
           +   L  P GV+ + N ++Y+AD  NH I+K+   +  + T+AG GK GF   +G A  A
Sbjct: 160 TNAQLNGPAGVFVSNN-EVYIADYSNHVIRKIS-QNGTIVTIAGNGKPGFSGDNGLATNA 217

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIR 916
           QL  P+G   + N  ++I+D  N++IR
Sbjct: 218 QLYNPSGTFVSSNNEVYISDCFNHVIR 244



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 31/218 (14%)

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL 768
           + TS  LN+P+ V +   N +V+IA      I      +G     +G+G ++  +G + L
Sbjct: 2   EATSAQLNNPFSV-FVSSNNEVFIADYSNQSI-RKVLQNGNIVTIAGNG-DKGFSGDNCL 58

Query: 769 NTS--FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFG 825
            TS     P G+ +S    +I              L+ G    +AG G P        FG
Sbjct: 59  ATSAQLNNPIGVFVSSIMKKI--------------LQNGTIVTIAGNGKP-------GFG 97

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--D 883
             +G+ +   L +P  VY + N ++Y+AD  N +I+K+    N + T+AG G  GF   +
Sbjct: 98  GDNGLATNAQLNYPRNVYVSSNNEVYIADFCNQRIRKVLQNGNII-TIAGNGTKGFSGDN 156

Query: 884 GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           G A  AQL+ PAG+    N  ++IAD +N++IR +  N
Sbjct: 157 GPATNAQLNGPAGVF-VSNNEVYIADYSNHVIRKISQN 193


>gi|421870164|ref|ZP_16301801.1| DipZ protein [Burkholderia cenocepacia H111]
 gi|358070771|emb|CCE52679.1| DipZ protein [Burkholderia cenocepacia H111]
          Length = 619

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 2/156 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 301 LPSLDGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTTAWARKYAPYGLVV 359

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    +   G++ 
Sbjct: 360 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFNNEYWPAHYFIDAQGRIR 419

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
               GEG     +  +++ L   G    L N PL L
Sbjct: 420 HHHFGEGEYAQSERAIQSLLAEAGHPDAL-NVPLGL 454


>gi|423120205|ref|ZP_17107889.1| hypothetical protein HMPREF9690_02211 [Klebsiella oxytoca 10-5246]
 gi|376397044|gb|EHT09680.1| hypothetical protein HMPREF9690_02211 [Klebsiella oxytoca 10-5246]
          Length = 397

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 432 EFPAKLD---WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + PA L    W+N+ PL+   DL+GKVV++DFWT  CINC H LP +     KY+     
Sbjct: 253 DLPALLGGSAWINSQPLR-PADLQGKVVLIDFWTRDCINCQHTLPYVRAWANKYRAAGLL 311

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVGVH+ ++  E+ L A+R+AV ++ + +P+V D    +W   G   WP   +    GKL
Sbjct: 312 VVGVHTPEYPWERSLPALRDAVAKWQLPYPIVADNGYAIWNAFGNQYWPAHYLFDARGKL 371

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG     + +++  L
Sbjct: 372 RYTAFGEGDYVQQEKMIQQLL 392


>gi|222054715|ref|YP_002537077.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
 gi|221564004|gb|ACM19976.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
          Length = 2393

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 184/405 (45%), Gaps = 51/405 (12%)

Query: 598  SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG--EEGLRDGSFDDAT 655
            S L +P   A+D L+  ++I+DS +NRI   D     I  I  +G  E     G    A 
Sbjct: 1584 SSLNYPEDAAVD-LDGNIYIADSANNRIRRVDKASGSIATIAGNGLAEFSGDGGPAYMAG 1642

Query: 656  FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
             NRP  +A +   N+ Y++D  N+ +R+ID  +  + T+AGNGT G+   GG    + L 
Sbjct: 1643 LNRPFAVALDTSGNI-YISDNLNYRVRKIDLASFIITTVAGNGTSGATGDGGLATAASL- 1700

Query: 716  NSPWDVCYKPINE--KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
                D+    ++    +YIA +G + I +      V +           N          
Sbjct: 1701 ---GDIRGLAVDTAGNIYIADSGSNGIRK------VEKTTGIITTIATGN---------- 1741

Query: 774  QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
             P G++L      +Y A++  + I  ++  T    ++AG      + +  +    G  ++
Sbjct: 1742 HPEGVTLD-RAGNLYYAETWGNVIVRIDKATSTKSIVAG------NGMGGYSGDGGPATQ 1794

Query: 834  VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQL 891
              L  P  +    NG IY++D++NH+I+K++ A+  +STLAG G AG+    GAA AA +
Sbjct: 1795 ASLYAPHRIVLDGNGNIYISDTFNHRIRKVNSATGLISTLAGTGTAGYSGDGGAATAAMI 1854

Query: 892  SEPAGIIEAQNGNLFIADTNNNI--IRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLR 949
            + P GI    NG +F AD+++ +  I     +   P+          PP    ++P+ + 
Sbjct: 1855 ASPRGISIGSNGTIFFADSSSRVRTISGGTSDTNPPDTT------ATPPGGTYQAPQWVT 1908

Query: 950  RRSS-PDAQTIVVDGGLSNE------GNIYLKISLPEEYHFSKEA 987
              ++ P      VDG           G IY+  S+  +Y F+++A
Sbjct: 1909 LSANEPATIYYTVDGTFPTPASPVYGGPIYVGSSMTLQY-FARDA 1952



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 26/225 (11%)

Query: 721  VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
            V  +P+  +VY     +  I      +GV   F+GDG    +   SSLN  + + + + L
Sbjct: 1543 VNSEPVQTQVYSITLAEQGIINTVAGNGV-AGFTGDG---GIAVGSSLN--YPEDAAVDL 1596

Query: 781  SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
              +   IY+ADS ++ IR ++  +G    +AG      + L +F    G      L  P 
Sbjct: 1597 DGN---IYIADSANNRIRRVDKASGSIATIAG------NGLAEFSGDGGPAYMAGLNRPF 1647

Query: 841  GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQLSEPAGII 898
             V    +G IY++D+ N++++K+D AS  ++T+AG G +G     G A AA L +  G+ 
Sbjct: 1648 AVALDTSGNIYISDNLNYRVRKIDLASFIITTVAGNGTSGATGDGGLATAASLGDIRGLA 1707

Query: 899  EAQNGNLFIADTNNNIIRYLD---------LNKEEPELQTLELKG 934
                GN++IAD+ +N IR ++              PE  TL+  G
Sbjct: 1708 VDTAGNIYIADSGSNGIRKVEKTTGIITTIATGNHPEGVTLDRAG 1752



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 38/313 (12%)

Query: 626  VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685
            ++  + GN +   G +G+ G+  GS    + N P+  A +   N+ Y+AD+ N+ +R +D
Sbjct: 1562 IINTVAGNGVA--GFTGDGGIAVGS----SLNYPEDAAVDLDGNI-YIADSANNRIRRVD 1614

Query: 686  FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
              + ++ T+AGNG       GG    + L N P+ V     +  +YI+    +++ +   
Sbjct: 1615 KASGSIATIAGNGLAEFSGDGGPAYMAGL-NRPFAVALD-TSGNIYISDNLNYRVRKIDL 1672

Query: 746  VDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM-EIYVADSESSSIRALNLKT 804
               +    +G+G      G   L T+ +      L+ D    IY+ADS S+ IR +    
Sbjct: 1673 ASFIITTVAGNG-TSGATGDGGLATAASLGDIRGLAVDTAGNIYIADSGSNGIRKVEKT- 1730

Query: 805  GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLD 864
                                     + +     HP GV   + G +Y A+++ + I ++D
Sbjct: 1731 ----------------------TGIITTIATGNHPEGVTLDRAGNLYYAETWGNVIVRID 1768

Query: 865  PASNRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
             A++  S +AG  +G      G A  A L  P  I+   NGN++I+DT N+ IR   +N 
Sbjct: 1769 KATSTKSIVAGNGMGGYSGDGGPATQASLYAPHRIVLDGNGNIYISDTFNHRIR--KVNS 1826

Query: 923  EEPELQTLELKGV 935
                + TL   G 
Sbjct: 1827 ATGLISTLAGTGT 1839


>gi|161522389|ref|YP_001585318.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           multivorans ATCC 17616]
 gi|189348735|ref|YP_001941931.1| putative cytochrome c biogenesis protein [Burkholderia multivorans
           ATCC 17616]
 gi|160345942|gb|ABX19026.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           multivorans ATCC 17616]
 gi|189338873|dbj|BAG47941.1| putative cytochrome c biogenesis protein [Burkholderia multivorans
           ATCC 17616]
          Length = 626

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 308 LPSLDGAVQWLNSPPLT-AAALRGKVVLVDFWTYSCINCLRTLPYTNAWARKYARYGLVV 366

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    V   G++ 
Sbjct: 367 IGVHAPEFAFERDIGNVKKAVRDLGIDYPVAIDNRYAIWRAFNNEYWPAHYFVDAQGRIR 426

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG   + +  ++  L   G    L N P+ L+
Sbjct: 427 RHHFGEGEYAESERAIQQLLAEAGHPDAL-NVPIGLT 462


>gi|398991140|ref|ZP_10694294.1| cytochrome c biogenesis protein [Pseudomonas sp. GM24]
 gi|399016466|ref|ZP_10718682.1| cytochrome c biogenesis protein [Pseudomonas sp. GM16]
 gi|398105264|gb|EJL95377.1| cytochrome c biogenesis protein [Pseudomonas sp. GM16]
 gi|398141274|gb|EJM30201.1| cytochrome c biogenesis protein [Pseudomonas sp. GM24]
          Length = 403

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 10/168 (5%)

Query: 409 ERIQQFVNY-ISDVENRKTTPI------VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW 461
           E + + V+Y +S V  R  +P+      +P     + WLN+  L     L+GKVV++DFW
Sbjct: 231 ENVPKVVDYFVSKV--RADSPMEEGRGAMPSLGGAVQWLNSPELS-AESLRGKVVLVDFW 287

Query: 462 TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVN 521
           TY CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ ++  V + GI++PV  
Sbjct: 288 TYDCINCQHTLPYVKDWAKKYEKDGLVVIGVHTPEYGYERIIDNVKEQVKKLGITYPVAI 347

Query: 522 DGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           D +  +WR      WP   ++  NG++     GEG  +  + +++  L
Sbjct: 348 DNNYAIWRNFDNQYWPAHYLIDANGQVRYSHFGEGRYEAQEQMIQQLL 395


>gi|290995458|ref|XP_002680312.1| predicted protein [Naegleria gruberi]
 gi|284093932|gb|EFC47568.1| predicted protein [Naegleria gruberi]
          Length = 744

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 164/310 (52%), Gaps = 21/310 (6%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKN 669
           N  ++I+D  +++I     +G  +V I  +G+ G    +G   +A  N P G+ + +  N
Sbjct: 40  NGEVYIADIGNHKIRKVLTNGK-MVTIAGNGQNGFSGDNGPATNAMLNYPIGV-FVSPYN 97

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            +Y+AD  N+ +R+I   N  + T+AGN   G          + +LN P  V +  +N++
Sbjct: 98  EVYIADYFNNRIRKI-LTNGNIITIAGNNVNGKGVYN-RLAINAMLNRPSGV-FVTLNDE 154

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           VYIA   +++I +  + +G     +G+G E    +   ++N    +PS + ++ +  E+Y
Sbjct: 155 VYIADQNRNKIRKIES-NGNIVTIAGNGKEGYGDDNVPAVNAMLNRPSSVFVTSN-NEVY 212

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           +AD+ +  IR + L+ G    +AG      + L  F + + + +   L  P  V+ + NG
Sbjct: 213 IADTGNHRIRKI-LRNGNIVTIAG------NGLVGFHEDNILATNTSLNFPKSVFVSSNG 265

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA--ALAAQLSEPAGIIEAQNGNLF 906
           ++Y+AD+ NH+I+K+  A+  ++T+AG GK G+ D    A+   L+ P+ +  + N  ++
Sbjct: 266 EVYIADTGNHRIRKI-LANGNIATIAGNGKEGYGDDNVPAIDTMLNRPSSVFVSSN-EVY 323

Query: 907 IADTNNNIIR 916
           IAD +N  IR
Sbjct: 324 IADQSNQRIR 333



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 23/273 (8%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           N ++I+D  +NRI     +GN I   G++   +G+ +    +A  NRP G+ +    + +
Sbjct: 97  NEVYIADYFNNRIRKILTNGNIITIAGNNVNGKGVYNRLAINAMLNRPSGV-FVTLNDEV 155

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731
           Y+AD   + +R+I+  N  + T+AGNG +G          + +LN P  V +   N +VY
Sbjct: 156 YIADQNRNKIRKIE-SNGNIVTIAGNGKEGYG-DDNVPAVNAMLNRPSSV-FVTSNNEVY 212

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDG----YERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           IA  G H+I +    +G     +G+G    +E N+  +   NTS   P  + +S +  E+
Sbjct: 213 IADTGNHRIRK-ILRNGNIVTIAGNGLVGFHEDNILAT---NTSLNFPKSVFVSSN-GEV 267

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           Y+AD+ +  IR + L  G    +AG           +GD +    + +L  P  V+ + N
Sbjct: 268 YIADTGNHRIRKI-LANGNIATIAGNGK------EGYGDDNVPAIDTMLNRPSSVFVSSN 320

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
            ++Y+AD  N +I+K+    N V T+AG G+ G
Sbjct: 321 -EVYIADQSNQRIRKILQNGNIV-TIAGNGREG 351



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 11/155 (7%)

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
           N +F  PS + +S +  E+Y+AD  +  IR + L  G    +AG       N F  GD +
Sbjct: 26  NANFKGPSSVFVSSN-GEVYIADIGNHKIRKV-LTNGKMVTIAGNG----QNGFS-GD-N 77

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG--IGKAGFKDGAA 886
           G  +  +L +P+GV+ +   ++Y+AD +N++I+K+    N + T+AG  +   G  +  A
Sbjct: 78  GPATNAMLNYPIGVFVSPYNEVYIADYFNNRIRKILTNGN-IITIAGNNVNGKGVYNRLA 136

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           + A L+ P+G+    N  ++IAD N N IR ++ N
Sbjct: 137 INAMLNRPSGVFVTLNDEVYIADQNRNKIRKIESN 171



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 7/107 (6%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD--DAT 655
           + L FP  + +   N  ++I+D+ ++RI     +GN I  I  +G+EG  D +    D  
Sbjct: 251 TSLNFPKSVFVS-SNGEVYIADTGNHRIRKILANGN-IATIAGNGKEGYGDDNVPAIDTM 308

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGS 702
            NRP  +  ++  N +Y+AD  N  +R+I   N  + T+AGNG +G+
Sbjct: 309 LNRPSSVFVSS--NEVYIADQSNQRIRKI-LQNGNIVTIAGNGREGN 352


>gi|290976675|ref|XP_002671065.1| predicted protein [Naegleria gruberi]
 gi|284084630|gb|EFC38321.1| predicted protein [Naegleria gruberi]
          Length = 343

 Score =  102 bits (254), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 91/318 (28%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD--DATFNRPQGLAYNAKKNL 670
           + ++I+D+  N  +   ++GN I+ I  +GE G    +     AT N+P  +  N +   
Sbjct: 25  DEVYIADT-ENHCIRKIINGN-IITIAGTGEAGFNGDNIKATQATINKPVCVIVNHRNGN 82

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +Y +D  N+ +R+ID  N  + T+ G G  G     G    +  LNSP  +C       +
Sbjct: 83  VYFSDLGNNRIRKID-NNGIISTIVGCGDYGL-VGDGNLAINSFLNSPRGICLSNDGNYL 140

Query: 731 YIAMAGQHQIWEHSTVD----GVTRAFSGDGYE-RNLNGSSSLNTSFAQPSGISLSPDFM 785
           YIA    H I + S  D    G+     G+G    + NGS +LN+    P GI++S D  
Sbjct: 141 YIADRDNHAIRKVSLNDDDDNGLIETIVGNGSSGESENGSLALNSQINCPYGIAISKD-D 199

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           E+Y ++  + +IR ++ K G    +AG D    +N +     D      LL +P  +   
Sbjct: 200 ELYFSEFSNHTIRKID-KNGKLWKVAGIDGKNGNNEY-----DHHAFNNLLNYPAYICFD 253

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
            N  +Y+AD  N+ I+K+D  +  ++T             A+  +L+ P G     N  L
Sbjct: 254 NNNNLYIADRDNNSIRKIDLKTGLINT-------------AVVKELNSPLGCFVTINNIL 300

Query: 906 FIADTNNNIIRYLDLNKE 923
           +IADT+N+ I+ +DLN E
Sbjct: 301 YIADTDNHQIKMIDLNNE 318



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 52/298 (17%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL-RDGSFDDATF-NRPQGLAYNAKKN 669
           N  ++ SD  +NRI   D +G  I  I   G+ GL  DG+    +F N P+G+  +   N
Sbjct: 80  NGNVYFSDLGNNRIRKIDNNG-IISTIVGCGDYGLVGDGNLAINSFLNSPRGICLSNDGN 138

Query: 670 LLYVADTENHALREIDFVNDT----VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
            LY+AD +NHA+R++   +D     + T+ GNG+ G    G     SQ +N P+ +    
Sbjct: 139 YLYIADRDNHAIRKVSLNDDDDNGLIETIVGNGSSGESENGSLALNSQ-INCPYGIAISK 197

Query: 726 INEKVYIAMAGQHQI---------WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
            ++++Y +    H I         W+ + +DG       + Y+ +     + N     P+
Sbjct: 198 -DDELYFSEFSNHTIRKIDKNGKLWKVAGIDGKN---GNNEYDHH-----AFNNLLNYPA 248

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL- 835
            I    +   +Y+AD +++SIR ++LKTG                        + + V+ 
Sbjct: 249 YICFDNN-NNLYIADRDNNSIRKIDLKTG-----------------------LINTAVVK 284

Query: 836 -LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
            L  PLG +   N  +Y+AD+ NH+IK +D  +  ++  AG G+ G+     L   L+
Sbjct: 285 ELNSPLGCFVTINNILYIADTDNHQIKMIDLNNEIITITAGTGEEGYSGDYILPTNLN 342



 Score = 49.7 bits (117), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%)

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT---FNRPQGLAYN 665
           ++LN   +I   N+N + + D D N I +I       L+ G  + A     N P G  + 
Sbjct: 242 NLLNYPAYICFDNNNNLYIADRDNNSIRKID------LKTGLINTAVVKELNSPLG-CFV 294

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG 701
              N+LY+ADT+NH ++ ID  N+ +   AG G +G
Sbjct: 295 TINNILYIADTDNHQIKMIDLNNEIITITAGTGEEG 330


>gi|221202554|ref|ZP_03575583.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           multivorans CGD2M]
 gi|221207753|ref|ZP_03580760.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           multivorans CGD2]
 gi|221172250|gb|EEE04690.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           multivorans CGD2]
 gi|221177591|gb|EEE10009.1| cytochrome c biogenesis protein, transmembrane region [Burkholderia
           multivorans CGD2M]
          Length = 626

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 308 LPPLDGAVQWLNSPPLT-AAALRGKVVLVDFWTYSCINCLRTLPYTNAWARKYARYGLVV 366

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    V   G++ 
Sbjct: 367 IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNRYAIWRAFNNEYWPAHYFVDAQGRIR 426

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG   + +  +++ L   G    L N P+ L+
Sbjct: 427 RHHFGEGEYAESERAIQSLLAEAGHPDAL-NVPVGLT 462


>gi|290995346|ref|XP_002680256.1| predicted protein [Naegleria gruberi]
 gi|284093876|gb|EFC47512.1| predicted protein [Naegleria gruberi]
          Length = 1226

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 35/364 (9%)

Query: 573 GKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDG 632
           G + ++ NT    S   D    L ++ +  P  +A++   N L+ +D+ +NRI V +L  
Sbjct: 184 GVRSVIVNTLGTKSFSGDGGSSL-SATINLPAGIALN--GNNLYFADTANNRIRVVNLQT 240

Query: 633 NFIVQIGSSGEE---GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND 689
           + +  I   G     G   GS  D +  RP+   YN++ + L VADT NH +  I+ + +
Sbjct: 241 SIVNTIAGDGTARFLGAYSGSRSDVSLFRPETTFYNSQTDELLVADTLNHRVVRINSLTN 300

Query: 690 T----VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW---- 741
                + ++AG     S+   G+ G    LN P+ V     +  VY         W    
Sbjct: 301 INTSPIESIAGYTGIASNDVAGKLGNQTYLNYPYSVAQSETSGDVYFGTTNFVYKWGKKD 360

Query: 742 -EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL 800
            + + + G +   +GD Y        ++ +   QP+G++ + +  ++Y  DS + +IR +
Sbjct: 361 QKITLIAGSSSTLAGDNYL-------AVGSQLYQPAGMAFASN-GDLYFCDSNNHAIRKI 412

Query: 801 NLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKI 860
           + +   + L   G   F         +DG  +  L   P  +    NG   VAD  N +I
Sbjct: 413 DTQGVITTLTGNGTAGF---------QDGDAASALFNSPASIALLPNGDFLVADFTNSRI 463

Query: 861 KKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGII-EAQNGNLFIADTNNNIIRY 917
           +K   ++ +V T+AG    GF   +G A  A L++P G+   + +G++ IAD  N  IR 
Sbjct: 464 RKYVASTKQVVTIAGNSTLGFYGDNGLASKALLNKPTGVFYNSTSGDILIADYFNFRIRK 523

Query: 918 LDLN 921
           +  N
Sbjct: 524 ISNN 527



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 37/350 (10%)

Query: 591 NDPRLFT-SPLKFPGKLAIDILNNRLFISDSNHNRIV-VTDLDGNFIVQ-IGSSGEEGLR 647
           N+  +FT +    P  +A D   + L++++   N+IV  T+   + IV  +G+    G  
Sbjct: 143 NNGSIFTYATSSGPYGIAFDSSGDNLYVAEYGSNKIVKFTNGVRSVIVNTLGTKSFSG-D 201

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG--SDYQ 705
            GS   AT N P G+A N   N LY ADT N+ +R ++     V T+AG+GT      Y 
Sbjct: 202 GGSSLSATINLPAGIALNG--NNLYFADTANNRIRVVNLQTSIVNTIAGDGTARFLGAYS 259

Query: 706 GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA--FSGDGY----E 759
           G     S  L  P    Y    +++ +A    H++   +++  +  +   S  GY     
Sbjct: 260 GSRSDVS--LFRPETTFYNSQTDELLVADTLNHRVVRINSLTNINTSPIESIAGYTGIAS 317

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE-----SSSIRALNLKTGGSRLLAGGD 814
            ++ G     T    P  ++ S    ++Y   +          + + L  G S  LAG  
Sbjct: 318 NDVAGKLGNQTYLNYPYSVAQSETSGDVYFGTTNFVYKWGKKDQKITLIAGSSSTLAG-- 375

Query: 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
               DN    G +        L  P G+  A NG +Y  DS NH I+K+D     ++TL 
Sbjct: 376 ----DNYLAVGSQ--------LYQPAGMAFASNGDLYFCDSNNHAIRKIDTQG-VITTLT 422

Query: 875 GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD-TNNNIIRYLDLNKE 923
           G G AGF+DG A +A  + PA I    NG+  +AD TN+ I +Y+   K+
Sbjct: 423 GNGTAGFQDGDAASALFNSPASIALLPNGDFLVADFTNSRIRKYVASTKQ 472



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 19/305 (6%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFDDATFNRPQGLAYNAKKNLLYV 673
           + I+D  + RI     +   I  I  SG      DG    +T   P GLA N     L+ 
Sbjct: 511 ILIADYFNFRIRKISNNTGIITTIAGSGSTSYNGDGLAATSTSMAPYGLAVNPISGELFF 570

Query: 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIA 733
            D  N  +R ID  +  V T+ G   K + +       S  L+S   + + P  + +Y++
Sbjct: 571 TDNANFLVRRID-ASSKVHTVIGVA-KSTIFNVTSLANSTGLSSISFLTFSPSGD-LYVS 627

Query: 734 MAGQHQIWEHSTVDGVTRAFSGDG-YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS 792
             GQH I + S    +    +G G  + N +G  +  T+  QP  ++ SP   E+Y +D 
Sbjct: 628 CFGQHVIKKMSYGSDIVYNVAGTGNTDLNGDGLEATLTNLYQPIAVAYSPTSSELYFSDY 687

Query: 793 ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYV 852
               +R +   +G    +AGG           GD+ G+     ++    +    N  +Y+
Sbjct: 688 LHDRVRKIT-SSGLVETVAGG----------LGDK-GLAVNAKIRGVSSILLVDN-DLYI 734

Query: 853 ADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS-EPAGIIEAQNGNLFIADTN 911
           +D++N++I+K+  ++  + ++ G   A   +G  LA Q +      +  QNG L  AD N
Sbjct: 735 SDAFNYRIRKISLSTGIIDSIVGASYASIYNGDNLANQTNINYVWDLRIQNGELVFADMN 794

Query: 912 NNIIR 916
           NN+IR
Sbjct: 795 NNLIR 799



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 82/362 (22%)

Query: 612 NNRLFISDSNHNRI---VVTDLDGNF-IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667
           N  +FI++ N  RI         G++ ++ +   G     + S  +A F++P+ +   + 
Sbjct: 10  NGEMFIAEYNATRIRKVYYNSTIGDYSMITVAGGGSSLSSNISALNAKFSQPRCVVV-SP 68

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG--------------------- 706
            N +Y+ DT N+ +R+I  VN  V  + GNG +GS   G                     
Sbjct: 69  NNEVYICDTGNYMIRKI--VNGVVYNIVGNGQQGSSTDGTLAVNAKVSLVLSVAFHPVSG 126

Query: 707 ------------------GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDG 748
                             G   T    + P+ + +    + +Y+A  G ++I + +  +G
Sbjct: 127 ELFFSDYSNNAIKYVMNNGSIFTYATSSGPYGIAFDSSGDNLYVAEYGSNKIVKFT--NG 184

Query: 749 V---------TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRA 799
           V         T++FSGD       G SSL+ +   P+GI+L+ +   +Y AD+ ++ IR 
Sbjct: 185 VRSVIVNTLGTKSFSGD-------GGSSLSATINLPAGIALNGN--NLYFADTANNRIRV 235

Query: 800 LNLKTGGSRLLAGGDPIFPDNLFKF-GDRDGMGSEVLLQHP-LGVYCAKNGQIYVADSYN 857
           +NL+T     +AG      D   +F G   G  S+V L  P    Y ++  ++ VAD+ N
Sbjct: 236 VNLQTSIVNTIAG------DGTARFLGAYSGSRSDVSLFRPETTFYNSQTDELLVADTLN 289

Query: 858 HKIKKLDPASNR----VSTLAGIGKAGFKDGAA-LAAQ--LSEPAGIIEAQ-NGNLFIAD 909
           H++ +++  +N     + ++AG       D A  L  Q  L+ P  + +++ +G+++   
Sbjct: 290 HRVVRINSLTNINTSPIESIAGYTGIASNDVAGKLGNQTYLNYPYSVAQSETSGDVYFGT 349

Query: 910 TN 911
           TN
Sbjct: 350 TN 351



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 199/473 (42%), Gaps = 41/473 (8%)

Query: 538 TFAVVGPNG----KLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSL------ 587
           T    G NG     LL +  G  +     D++ A    +  +K+ +NT +  ++      
Sbjct: 481 TLGFYGDNGLASKALLNKPTGVFYNSTSGDILIADYFNFRIRKISNNTGIITTIAGSGST 540

Query: 588 EKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR 647
             + D    TS    P  LA++ ++  LF +D+ +  +   D        IG +      
Sbjct: 541 SYNGDGLAATSTSMAPYGLAVNPISGELFFTDNANFLVRRIDASSKVHTVIGVAKSTIFN 600

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG- 706
             S  ++T          +    LYV+    H ++++ + +D V  +AG G   +D  G 
Sbjct: 601 VTSLANSTGLSSISFLTFSPSGDLYVSCFGQHVIKKMSYGSDIVYNVAGTGN--TDLNGD 658

Query: 707 GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS 766
           G + T   L  P  V Y P + ++Y +    H      T  G+    +G   ++ L    
Sbjct: 659 GLEATLTNLYQPIAVAYSPTSSELYFSDY-LHDRVRKITSSGLVETVAGGLGDKGL---- 713

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
           ++N      S I L  +  ++Y++D+ +  IR ++L TG   ++   D I   +     +
Sbjct: 714 AVNAKIRGVSSILLVDN--DLYISDAFNYRIRKISLSTG---II---DSIVGASYASIYN 765

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLD-PASNRVSTLAGIGKAG----F 881
            D + ++  + +   +   +NG++  AD  N+ I+K       +V+T+AG+G        
Sbjct: 766 GDNLANQTNINYVWDLRI-QNGELVFADMNNNLIRKTSLSGKGKVTTIAGMGTNNASIII 824

Query: 882 KDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPK 941
            +  A +A L  P  +     G++ IA+T  +IIR +DLN     +  +     QP    
Sbjct: 825 DNVKATSAYLKNPGSVAFLPTGDMIIAETEGHIIRKVDLNG---NISLIAGSFFQPGFNG 881

Query: 942 SRSPKRLRRRSSPDAQTIVVDGGL--SNEGNIYLKISLP----EEYHFSKEAR 988
             S  +      P   +I+ DG +  S+ GN  +++  P    E+Y+ ++ ++
Sbjct: 882 DLSDSKNSLLYQPTGLSILQDGRIIFSDFGNNRVRMLTPYCKDEKYYLTQSSQ 934


>gi|325104746|ref|YP_004274400.1| NHL repeat containing protein [Pedobacter saltans DSM 12145]
 gi|324973594|gb|ADY52578.1| NHL repeat containing protein [Pedobacter saltans DSM 12145]
          Length = 1769

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 144/303 (47%), Gaps = 22/303 (7%)

Query: 614  RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673
             +++++  ++ I     DG      GS+   G  DG    A FN PQG+A +A  N+ Y+
Sbjct: 905  NIYVAEYGNSLIRKITADGQVSTFAGST--FGYADGIGTAAKFNGPQGMAIDASGNI-YI 961

Query: 674  ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIA 733
            A+     +R+I      V T+AG+GT G+       GT+   N P  +   P    +YIA
Sbjct: 962  AERGASRIRKIT-PQGLVSTIAGSGTNGNS---NGVGTAASFNKPTGIAIDPWG-NIYIA 1016

Query: 734  MAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793
                H I    T +G    F+G+G     +G   L   F +P+GI ++     +YV++S 
Sbjct: 1017 DDLNHSI-RKITPNGTVSTFAGNGTAGYADGVGVL-ARFNRPTGI-ITDALGNVYVSES- 1072

Query: 794  SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVA 853
            S+ IR +      S     G           G  DG G+  +   P  +    +  IYV+
Sbjct: 1073 SNYIRKITPNGTVSTFAGNGTA---------GYADGPGTSAMFNSPQAMVMDASDNIYVS 1123

Query: 854  DSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN 913
            +S NH+I+K+ PA   VST+AG G  G +DG    AQ   P GI    +GN+++A+ +N+
Sbjct: 1124 ESSNHRIRKITPAG-EVSTVAGKGVQGNRDGTKEEAQFWGPVGIALDMSGNIYVAEWSNH 1182

Query: 914  IIR 916
             IR
Sbjct: 1183 RIR 1185



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 21/261 (8%)

Query: 603  PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
            P  +AID   N ++I++   +RI      G  +  I  SG  G  +G    A+FN+P G+
Sbjct: 948  PQGMAIDASGN-IYIAERGASRIRKITPQG-LVSTIAGSGTNGNSNGVGTAASFNKPTGI 1005

Query: 663  AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
            A +   N+ Y+AD  NH++R+I   N TV T AGNGT G  Y  G  G     N P  + 
Sbjct: 1006 AIDPWGNI-YIADDLNHSIRKIT-PNGTVSTFAGNGTAG--YADG-VGVLARFNRPTGII 1060

Query: 723  YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
               +   VY++ +  +      T +G    F+G+G     +G  + +  F  P  + +  
Sbjct: 1061 TDALG-NVYVSESSNYI--RKITPNGTVSTFAGNGTAGYADGPGT-SAMFNSPQAMVMDA 1116

Query: 783  DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
                IYV  SESS+ R   +   G      G  +        G+RDG   E     P+G+
Sbjct: 1117 S-DNIYV--SESSNHRIRKITPAGEVSTVAGKGVQ-------GNRDGTKEEAQFWGPVGI 1166

Query: 843  YCAKNGQIYVADSYNHKIKKL 863
                +G IYVA+  NH+I+K+
Sbjct: 1167 ALDMSGNIYVAEWSNHRIRKI 1187



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 23/226 (10%)

Query: 691  VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
            V TLAG+ TKG       KG     ++P  V        +Y+A  G   I    T DG  
Sbjct: 872  VSTLAGS-TKGVV---NGKGIEAQFDTPAGVVADA-EGNIYVAEYGNSLI-RKITADGQV 925

Query: 751  RAFSGD--GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
              F+G   GY   +  ++  N     P G+++      IY+A+  +S IR +  +   S 
Sbjct: 926  STFAGSTFGYADGIGTAAKFN----GPQGMAIDAS-GNIYIAERGASRIRKITPQGLVST 980

Query: 809  LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
            +   G           G+ +G+G+      P G+     G IY+AD  NH I+K+ P + 
Sbjct: 981  IAGSGTN---------GNSNGVGTAASFNKPTGIAIDPWGNIYIADDLNHSIRKITP-NG 1030

Query: 869  RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
             VST AG G AG+ DG  + A+ + P GII    GN+++++++N I
Sbjct: 1031 TVSTFAGNGTAGYADGVGVLARFNRPTGIITDALGNVYVSESSNYI 1076



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 12/150 (8%)

Query: 772  FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
            F  P+G+    +   IYVA+  +S IR +    G     AG           FG  DG+G
Sbjct: 892  FDTPAGVVADAE-GNIYVAEYGNSLIRKITAD-GQVSTFAGS---------TFGYADGIG 940

Query: 832  SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
            +      P G+    +G IY+A+    +I+K+ P    VST+AG G  G  +G   AA  
Sbjct: 941  TAAKFNGPQGMAIDASGNIYIAERGASRIRKITP-QGLVSTIAGSGTNGNSNGVGTAASF 999

Query: 892  SEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            ++P GI     GN++IAD  N+ IR +  N
Sbjct: 1000 NKPTGIAIDPWGNIYIADDLNHSIRKITPN 1029


>gi|194292021|ref|YP_002007928.1| thiol-disulfide oxidoreductase [Cupriavidus taiwanensis LMG 19424]
 gi|193225925|emb|CAQ71872.1| putative Thiol-disulfide oxidoreductase [Cupriavidus taiwanensis
           LMG 19424]
          Length = 179

 Score =  102 bits (254), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN+ PL     L+GKVV++DFWTY CINC++ LP +     KY+D    VV
Sbjct: 38  PEFTGIGKWLNSEPLTVA-GLRGKVVLVDFWTYSCINCINTLPHVRKWYDKYRDQGLVVV 96

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+    ++ A+ R+ I +PV  D     W       WP   +V  +G ++ 
Sbjct: 97  GVHTPEYAFERSTGNVQAALKRFDIRYPVAQDNAYATWNAWRNQYWPALYLVDADGNVVY 156

Query: 551 QLAGEGHRKDLDDLVEAAL 569
           +  GEG   + +  ++ AL
Sbjct: 157 KHFGEGQYAETEAAIQKAL 175


>gi|378951618|ref|YP_005209106.1| protein DipZ [Pseudomonas fluorescens F113]
 gi|359761632|gb|AEV63711.1| DipZ [Pseudomonas fluorescens F113]
          Length = 403

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN++PL     LKGKVV++DFWTY CINC H LP +    KKY+     V
Sbjct: 258 MPALDGAVQWLNSSPLS-SESLKGKVVLVDFWTYDCINCQHTLPYVNGWAKKYEKDGLVV 316

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK ++ +R  V +  I +PV  D    +WR      WP    +   G++ 
Sbjct: 317 IGVHTPEYGYEKIIDNVREQVRKLDIHYPVAIDNQYAIWRAFNNQYWPAHYFIDAKGQVR 376

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   + + +++  L
Sbjct: 377 YSHFGEGRYDEQEQVIQQLL 396


>gi|162448821|ref|YP_001611188.1| NHL repeat-containing protein [Sorangium cellulosum So ce56]
 gi|161159403|emb|CAN90708.1| hypothetical protein with NHL repeat [Sorangium cellulosum So ce56]
          Length = 1889

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 55/349 (15%)

Query: 638  IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
             G +G   L +GS+  A F +P  +AY+A   +LYVAD    A+R ID  +  V T+AG+
Sbjct: 791  FGLAGARALTNGSYAQARFIQPGDMAYDASTRMLYVAD--RTAVRRIDLTSGAVTTIAGS 848

Query: 698  GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
               G+       GT+   N+   +     +  +YIA  G   I                 
Sbjct: 849  TVSGTT---DGVGTAARFNTISGITLH--DGALYIADRGSRTI----------------- 886

Query: 758  YERNLNGSSSLNTSFAQPSGISLSPDFM----EIYVADSESSSIRALNLKTGGSRLLAGG 813
              R L  SS   T+ A  + +    D       +YV +S   ++  ++L TG +  +AG 
Sbjct: 887  --RKLTLSSGQVTTIADRTVVGTPRDVAVVGSHLYVTNSGDRTLVWIDLATGANIAVAG- 943

Query: 814  DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
                       G+ DG+G+      P G+     G +Y+AD++NH +++ + A++ V+T+
Sbjct: 944  ------LASSSGNVDGVGTTARFAEPSGIVADGRGNLYIADAFNHSLRRFEIATSMVTTV 997

Query: 874  AGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN-NIIRYLDLNKEEPEL-QTLE 931
            AG G AG  DG   AA+L+ P  +    +G++FI + N    +R  D     P L  T+ 
Sbjct: 998  AGNGTAGSADGVGTAARLTSPQALAIDGSGSVFIGEGNKPGRVRRFD-----PALGATVT 1052

Query: 932  LKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLS--NEGNIYLKISLP 978
            + G          P  + +     +  + + GGL+    G+IY+  SLP
Sbjct: 1053 VAG---------GPGTVWQDGLATSAVLELPGGLAVLPSGDIYVSDSLP 1092



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 33/321 (10%)

Query: 603  PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
            PG +A D     L+++D    R +  DL    +  I  S   G  DG    A FN   G+
Sbjct: 812  PGDMAYDASTRMLYVADRTAVRRI--DLTSGAVTTIAGSTVSGTTDGVGTAARFNTISGI 869

Query: 663  AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
              +     LY+AD  +  +R++   +  V T+A                  ++ +P DV 
Sbjct: 870  TLH--DGALYIADRGSRTIRKLTLSSGQVTTIADR---------------TVVGTPRDVA 912

Query: 723  YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGISLS 781
               +   +Y+  +G   +       G   A +G      N++G  +    FA+PSGI ++
Sbjct: 913  V--VGSHLYVTNSGDRTLVWIDLATGANIAVAGLASSSGNVDGVGT-TARFAEPSGI-VA 968

Query: 782  PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
                 +Y+AD+ + S+R   + T     +AG            G  DG+G+   L  P  
Sbjct: 969  DGRGNLYIADAFNHSLRRFEIATSMVTTVAGNG--------TAGSADGVGTAARLTSPQA 1020

Query: 842  VYCAKNGQIYVADSYN-HKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
            +    +G +++ +     ++++ DPA     T+AG     ++DG A +A L  P G+   
Sbjct: 1021 LAIDGSGSVFIGEGNKPGRVRRFDPALGATVTVAGGPGTVWQDGLATSAVLELPGGLAVL 1080

Query: 901  QNGNLFIADTNNNIIRYLDLN 921
             +G+++++D+  + +R +  N
Sbjct: 1081 PSGDIYVSDSLPSTVRKIGSN 1101


>gi|406981053|gb|EKE02574.1| redoxin protein [uncultured bacterium]
          Length = 309

 Score =  102 bits (253), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 78/281 (27%), Positives = 122/281 (43%), Gaps = 29/281 (10%)

Query: 432 EFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           EFP  L W N   PL+   DL GKVV++DFWTY CINC+ ++P L++    Y    F +V
Sbjct: 3   EFPPGLTWFNVEKPLKMI-DLIGKVVLIDFWTYSCINCIRMIPFLKYWYDTYNKYGFEIV 61

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+H+ +F  EKD   + NA+  Y I +PVV D +  LW       WP   +    GKL  
Sbjct: 62  GIHAPEFGFEKDSLNVENAIKNYDIPYPVVLDNNHRLWTVYDNRYWPAHYLHDAIGKLRY 121

Query: 551 QLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPL--PLSLEKDNDPRLFTSPLKFPGKLAI 608
              GEG  +  + ++   L   G +      P+  P+   K      +    +  G  + 
Sbjct: 122 THFGEGEYEKTEQMIRKLLEEKGVRIEEPMIPIKVPVDFTKIGSSETYLGYGRMVGFASP 181

Query: 609 DIL--NNRLFIS---DSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG-L 662
           + L  N   + S   +   NR+                  EG+     D +T  +P+G +
Sbjct: 182 EELKHNTPQYYSIPPEIKKNRVYF----------------EGMWKVDIDKSTLEKPEGKI 225

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           AY    N + +    NH ++ +  ++     +   G KG D
Sbjct: 226 AYRYSANKINLVMGSNHPVKALVLIDGEKLQI---GNKGDD 263


>gi|290989086|ref|XP_002677176.1| predicted protein [Naegleria gruberi]
 gi|284090782|gb|EFC44432.1| predicted protein [Naegleria gruberi]
          Length = 2103

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 155/334 (46%), Gaps = 36/334 (10%)

Query: 590 DNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL-RD 648
           DN P   ++ + +P    I+  N  L ISD N++RI     +G  I  I  +G  G   D
Sbjct: 488 DNIPAT-SAIMNYPSHCVINSTNGELIISDMNNHRIRKVSNNG-IITTIAGNGTAGFCGD 545

Query: 649 GSFD-DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG- 706
           G    +   NRP G+A ++   L Y+AD  NH +R++   N  + T+AGNG   + Y G 
Sbjct: 546 GGLAVNTCLNRPNGIAISSSGEL-YIADYGNHRIRKVS-NNGIITTIAGNG--NTIYNGD 601

Query: 707 GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH---QIWEHSTVDGV----TRAFSGDGYE 759
           G    +  L SP DV     NE +YIA AG +   +I+ + T+  +    T  FSGD   
Sbjct: 602 GIDAANASLYSPVDVSIGANNE-IYIADAGNYRIRKIFTNGTIVTIAGTGTNGFSGD--- 657

Query: 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD 819
              NG  S N +   PS +  +     +Y  D     IR +    G    ++G       
Sbjct: 658 ---NGLGS-NATIGYPSSVLFNSG--NVYFTDIVYCVIRKI-YSNGTITTISG-----KA 705

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
               +G   G  S   L +P G+  +  G IY++D+YNH+I+ +   +  +S +AG G++
Sbjct: 706 GTCTYGGDGGKASNAQLSYPAGIAISSTGDIYISDNYNHRIRVISSVTGIISNIAGTGRS 765

Query: 880 GFKDGAALAAQLSE---PAGIIEAQNGNLFIADT 910
            + +G  L   ++    P G+    + NL + +T
Sbjct: 766 EY-NGDGLHESITNFAYPVGLTFDSSENLIVCET 798



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 150/319 (47%), Gaps = 42/319 (13%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD--DATFNRPQGLAYNAKKNLLY 672
           + I+D+ +NRI     +G  I  I  +G+ G      D   AT N P G+A++     +Y
Sbjct: 70  IVIADTLNNRIRKISNNG-IISTIAGNGQAGYNGDGIDATKATVNSPHGVAFHPTSGEVY 128

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNSPWDVCYKPINEKVY 731
            AD  NH +R+I + N T+ T+AGNG    +Y G     TS  L  P           + 
Sbjct: 129 FADYANHRIRKI-YSNGTITTIAGNGEP--NYNGDNIPATSAQLGYP-----------IG 174

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS----------SLNTSFAQPSGISLS 781
           IA++   +++   T++   R  S +G    + G+           ++N     P G+++ 
Sbjct: 175 IAVSSGGEVFIADTLNNRIRKISNNGMITTIAGNGTGGYSGDGGPAVNAMLNTPFGVAID 234

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI-FPDNLFKFGDRDGMGSEVLLQHPL 840
            D   I  AD  ++ IR +        ++  G+    PD          + +   ++ PL
Sbjct: 235 SD-GNIVFADLVNNRIRKVYSSGTIVTIVGTGEAANSPD--------GSLANNAPIRFPL 285

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPAGI- 897
            V   K+  +Y +DSY  +I+K+   S  +S++AG G++G+  DG  A  A L+ P GI 
Sbjct: 286 SVALTKSNDLYFSDSY-QRIRKVSATSGIISSIAGDGQSGYNYDGIDATIATLNNPVGIA 344

Query: 898 IEAQNGNLFIADTNNNIIR 916
           I++ N   +IAD+NNN IR
Sbjct: 345 IDSSNNEFYIADSNNNRIR 363



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 148/313 (47%), Gaps = 29/313 (9%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKN 669
           NN ++I+D+ + RI     +G  IV I  +G  G    +G   +AT   P  + +N+   
Sbjct: 621 NNEIYIADAGNYRIRKIFTNGT-IVTIAGTGTNGFSGDNGLGSNATIGYPSSVLFNSGN- 678

Query: 670 LLYVADTENHALREIDFVNDTVRTL---AGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
            +Y  D     +R+I + N T+ T+   AG  T G D  GG+   +QL + P  +     
Sbjct: 679 -VYFTDIVYCVIRKI-YSNGTITTISGKAGTCTYGGD--GGKASNAQL-SYPAGIAISST 733

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY-ERNLNGSSSLNTSFAQPSGISLSPDFM 785
            + +YI+    H+I   S+V G+    +G G  E N +G     T+FA P G++      
Sbjct: 734 GD-IYISDNYNHRIRVISSVTGIISNIAGTGRSEYNGDGLHESITNFAYPVGLTFDSSEN 792

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
            I    + S  IR +   TG    +AGG           GD     +  L+     +  +
Sbjct: 793 LIVCETTSSWKIRKILATTGMVSTIAGG----------IGDGLNASNAFLVSTLFDI--S 840

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNG 903
            +G+IY+AD+ NH+I+K+   +  + T+AG  IG      G A +AQL+ P  +  + NG
Sbjct: 841 NSGEIYIADTGNHRIRKI-FTNGTIITIAGNGIGGYAGDGGQATSAQLNNPKDVAVSSNG 899

Query: 904 NLFIADTNNNIIR 916
            L IAD +NN IR
Sbjct: 900 ELIIADYSNNRIR 912



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 152/325 (46%), Gaps = 30/325 (9%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDD--AT 655
           +P++FP  +A+   +N L+ SDS + RI         I  I   G+ G      D   AT
Sbjct: 279 APIRFPLSVALT-KSNDLYFSDS-YQRIRKVSATSGIISSIAGDGQSGYNYDGIDATIAT 336

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
            N P G+A ++  N  Y+AD+ N+ +R++   +  + T+AG    G+   G         
Sbjct: 337 LNNPVGIAIDSSNNEFYIADSNNNRIRKVS-SSGKITTIAG----GTSSFGNNVPAIPAF 391

Query: 716 NSPWDVCYKPINEKVYIAMAGQ-HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            SP        N+  +   +GQ  QI  + T + +T      GY       +++  +++ 
Sbjct: 392 ISPIGSMSLNNNQLSFADSSGQFRQI--NLTSNLITTLAGTVGY-------TTIIQTYSN 442

Query: 775 PSGIS-LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
           P+ I   + D   +Y ++S S   R +NL  G +  LAG        +F  GD     S 
Sbjct: 443 PNSIKFFNNDMYVMYTSNSVSYIDRIVNLNYGPAVKLAGA-------IFYNGDNIPATSA 495

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQL 891
           ++      V  + NG++ ++D  NH+I+K+   +  ++T+AG G AGF    G A+   L
Sbjct: 496 IMNYPSHCVINSTNGELIISDMNNHRIRKVSN-NGIITTIAGNGTAGFCGDGGLAVNTCL 554

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIR 916
           + P GI  + +G L+IAD  N+ IR
Sbjct: 555 NRPNGIAISSSGELYIADYGNHRIR 579



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 153/324 (47%), Gaps = 26/324 (8%)

Query: 600  LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGE-EGLRDGSFDDAT-FN 657
            L +P  +AI    + ++ISD+ ++RI V       I  I  +G  E   DG  +  T F 
Sbjct: 722  LSYPAGIAISSTGD-IYISDNYNHRIRVISSVTGIISNIAGTGRSEYNGDGLHESITNFA 780

Query: 658  RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
             P GL +++ +NL+    T +  +R+I      V T+AG    G +        + L+++
Sbjct: 781  YPVGLTFDSSENLIVCETTSSWKIRKILATTGMVSTIAGGIGDGLN-----ASNAFLVST 835

Query: 718  PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS-FAQPS 776
             +D+       ++YIA  G H+I +  T +G     +G+G            ++    P 
Sbjct: 836  LFDISNSG---EIYIADTGNHRIRKIFT-NGTIITIAGNGIGGYAGDGGQATSAQLNNPK 891

Query: 777  GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
             +++S +  E+ +AD  ++ IR +      + +   G          +G  +G+ +   L
Sbjct: 892  DVAVSSN-GELIIADYSNNRIRKVFTNGTITTIAGTGTN-------GYGGDNGLATTAKL 943

Query: 837  QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEP 894
              P+GV  +  G+IY++++  ++I+K+   +  + T+AG    G+K  +G A  A L+ P
Sbjct: 944  SLPVGVSISSGGEIYISET--NRIRKV-LTNGTIYTIAGTLSNGYKGDNGLASLASLNAP 1000

Query: 895  AGIIEAQNGNLFIADTNNNIIRYL 918
              +    +G L+ ADT N++IR L
Sbjct: 1001 GTVSIGPSGELYFADTENSVIRKL 1024



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 104/208 (50%), Gaps = 21/208 (10%)

Query: 671  LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
            +Y+ADT NH +R+I F N T+ T+AGNG  G     G + TS  LN+P DV     N ++
Sbjct: 845  IYIADTGNHRIRKI-FTNGTIITIAGNGIGGYA-GDGGQATSAQLNNPKDVAVSS-NGEL 901

Query: 731  YIAMAGQHQIWEHST--VDGVTRAFSGDGYERNLNGSSSLNTS--FAQPSGISLSPDFME 786
             IA    ++I +  T            +GY     G + L T+   + P G+S+S    E
Sbjct: 902  IIADYSNNRIRKVFTNGTITTIAGTGTNGY----GGDNGLATTAKLSLPVGVSISSG-GE 956

Query: 787  IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
            IY+  SE++ IR + L  G    +AG       N +K GD +G+ S   L  P  V    
Sbjct: 957  IYI--SETNRIRKV-LTNGTIYTIAGT----LSNGYK-GD-NGLASLASLNAPGTVSIGP 1007

Query: 847  NGQIYVADSYNHKIKKLDPASNRVSTLA 874
            +G++Y AD+ N  I+KL P  N  S++ 
Sbjct: 1008 SGELYFADTENSVIRKLTPYCNAYSSIC 1035



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 5/98 (5%)

Query: 828 DGM-GSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--D 883
           DG+  ++  +  P GV +   +G++Y AD  NH+I+K+  ++  ++T+AG G+  +   +
Sbjct: 103 DGIDATKATVNSPHGVAFHPTSGEVYFADYANHRIRKI-YSNGTITTIAGNGEPNYNGDN 161

Query: 884 GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
             A +AQL  P GI  +  G +FIADT NN IR +  N
Sbjct: 162 IPATSAQLGYPIGIAVSSGGEVFIADTLNNRIRKISNN 199


>gi|398872460|ref|ZP_10627750.1| cytochrome c biogenesis protein [Pseudomonas sp. GM74]
 gi|398202494|gb|EJM89336.1| cytochrome c biogenesis protein [Pseudomonas sp. GM74]
          Length = 405

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 10/169 (5%)

Query: 409 ERIQQFVNYI-----SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E + + V+Y+     +D     T   +P     ++WLN+ P      LKGKVV++DFWT+
Sbjct: 231 ETVPKVVDYLVSKVKADSTMGDTQGAMPSLSGAVEWLNS-PTLTNEALKGKVVLVDFWTF 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ ++  V  YGI++PV  D 
Sbjct: 290 DCINCKHTLPYVKDWAKKYEKDGLVVIGVHTPEYGFERIIDNVKAKVKEYGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG----HRKDLDDLVEAA 568
           +  +WR      WP   ++   G++     GEG      K +  L+E A
Sbjct: 350 NYAIWRNFDNQYWPAHYIIDAKGQVRYTHFGEGSYDTQEKVIQQLLEEA 398


>gi|398946368|ref|ZP_10672029.1| cytochrome c biogenesis protein [Pseudomonas sp. GM41(2012)]
 gi|398155104|gb|EJM43560.1| cytochrome c biogenesis protein [Pseudomonas sp. GM41(2012)]
          Length = 403

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 10/168 (5%)

Query: 409 ERIQQFVNYI-------SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW 461
           E + + V+Y        S ++N K +  +P     ++WLN+  L     LKGKVV++DFW
Sbjct: 231 ETVPKVVDYFVSKVSADSSMDNAKGS--MPSLSGAVEWLNSPALS-NDSLKGKVVLVDFW 287

Query: 462 TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVN 521
           TY CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ +++ V + GI++PV  
Sbjct: 288 TYDCINCQHTLPYVKDWAKKYEKDGLVVIGVHTPEYGFERIIDNVKDQVKKLGITYPVAI 347

Query: 522 DGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           D +  +WR      WP   ++   G++     GEG  +  + +++  L
Sbjct: 348 DNNYAIWRNFDNQYWPAHYLIDAKGQVRYTHFGEGRYETQEKVIQQLL 395


>gi|392959849|ref|ZP_10325326.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans DSM 17108]
 gi|421053489|ref|ZP_15516465.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans B4]
 gi|421059169|ref|ZP_15521791.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans B3]
 gi|421063969|ref|ZP_15525898.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans A12]
 gi|421071152|ref|ZP_15532275.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans A11]
 gi|392441914|gb|EIW19527.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans B4]
 gi|392447499|gb|EIW24740.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans A11]
 gi|392455818|gb|EIW32589.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans DSM 17108]
 gi|392459428|gb|EIW35836.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans B3]
 gi|392461985|gb|EIW38116.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans A12]
          Length = 234

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 71  SSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDF-LPFMGTGEANFL 129
           +SE    KV AV+FD+DG L +SE    +A   +  E G+    E+    ++G G    +
Sbjct: 4   NSEVLKHKVKAVIFDLDGTLVDSEPNYSKADNVLLREYGIPALSEEMKRKYVGIGTREMM 63

Query: 130 GGVASVKGV-KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVAS 188
             V  + G+ +  D    KK   + YL+  AK N+ I FP     +   K K   +A+AS
Sbjct: 64  EDVKGIYGLNESIDMLVTKKN--QYYLE-IAKENT-IVFPEMYRFLQFLKEKNYPLAIAS 119

Query: 189 SADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDA 248
            +    +D  LA   L    FD I+SAD     KPAPD+F  A+K L VP   C+V+ED+
Sbjct: 120 GSSPEIIDIILAITNL-TEYFDVILSADEVAKGKPAPDVFWEAAKRLGVPFENCLVMEDS 178

Query: 249 LAGVQAAKAAQMRCIAVTTTLSE 271
           + GV+AAK+A M C+A+   + E
Sbjct: 179 VHGVEAAKSASMYCMALPYMMEE 201


>gi|419957071|ref|ZP_14473137.1| putative cytochrome c biogenesis protein [Enterobacter cloacae
           subsp. cloacae GS1]
 gi|388607229|gb|EIM36433.1| putative cytochrome c biogenesis protein [Enterobacter cloacae
           subsp. cloacae GS1]
          Length = 396

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +    KKY+     V
Sbjct: 253 LPSLSGGTGWVNGDPVT-SEALRGKVVLIDFWTWDCINCQHTLPHVRDWAKKYESQGLVV 311

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L +++NAV ++ + +PVV D +  +W   G   WP        G+L 
Sbjct: 312 IGVHTPEYPWEKPLSSVKNAVNKWQLPYPVVTDNNYKIWSAFGNQYWPAHYYFDAKGQLR 371

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 372 YTAFGEGNYDKQEAVIQQLL 391


>gi|398867632|ref|ZP_10623084.1| cytochrome c biogenesis protein [Pseudomonas sp. GM78]
 gi|398236313|gb|EJN22102.1| cytochrome c biogenesis protein [Pseudomonas sp. GM78]
          Length = 404

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++W+N+ P      LKGKVV++DFWT+ CINC H LP ++   KKY+     V
Sbjct: 256 MPSLAGAVEWINS-PALTNESLKGKVVLVDFWTFDCINCKHTLPYVKDWAKKYEKDGLVV 314

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ ++ +R+ V  YGI++PV  D +  +WR      WP   ++   G++ 
Sbjct: 315 IGVHTPEYGFERIIDNVRDKVQEYGITYPVAIDNNYAIWRNFDNQYWPAHYLIDAKGQVR 374

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 375 FTHFGEGSYETQEKVIQQLL 394


>gi|398928719|ref|ZP_10663647.1| cytochrome c biogenesis protein [Pseudomonas sp. GM48]
 gi|398168010|gb|EJM56040.1| cytochrome c biogenesis protein [Pseudomonas sp. GM48]
          Length = 405

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 409 ERIQQFVNYI-----SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E + + V+Y+     +D         +P     ++WLN+  L     LKGKVV++DFWT+
Sbjct: 231 ETVPKVVDYLVSKVKADSAMDNAQGAMPSLSGAVEWLNSPALS-NEALKGKVVLVDFWTF 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ +R  V  YGI++PV  D 
Sbjct: 290 DCINCKHTLPYVKDWAKKYEKDGLVVIGVHTPEYGFERIIDNVRAKVKEYGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           +  +WR      WP   ++   G++     GEG     + +++  L
Sbjct: 350 NYAIWRNFDNQYWPAHYIIDAKGQVRYTHFGEGSYDTQEKMIQQLL 395


>gi|424666923|ref|ZP_18103948.1| hypothetical protein A1OC_00481 [Stenotrophomonas maltophilia
           Ab55555]
 gi|401069592|gb|EJP78113.1| hypothetical protein A1OC_00481 [Stenotrophomonas maltophilia
           Ab55555]
          Length = 588

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL   + L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 270 LPALDGATGWLNSPPLT-AQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 328

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E+D   +  AV +  + +PV  D    +WR      WP    V   G + 
Sbjct: 329 VGVHTPEFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIR 388

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 389 GHQFGEGNYARSEQVIRRLLTEAGQTNL 416


>gi|270307765|ref|YP_003329823.1| hypothetical protein DhcVS_338 [Dehalococcoides sp. VS]
 gi|270153657|gb|ACZ61495.1| hypothetical protein DhcVS_338 [Dehalococcoides sp. VS]
          Length = 456

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 106/214 (49%), Gaps = 6/214 (2%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV++DMDGV+ +S     RA    FAE+G   +  DF    G      +  V   K    
Sbjct: 239 AVIWDMDGVIADSAPFHMRAWQTTFAEIGYTFSAADFYRTFGLRNDMIIYSVLGEKSDAD 298

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
                A ++  E    +YA     + FPG +EL+   K  G ++A+ASSA    +   +A
Sbjct: 299 TIHTLADRK--EHLFREYAGQEIRL-FPGVIELLKSLKPAGYRMAIASSAPLANIKLVMA 355

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             G+    F A VS       KP P +FL A+  L     EC+VIEDA AGV+AAK A M
Sbjct: 356 KLGIG-DYFLATVSEKDVTKGKPNPQVFLLAAARLCASPEECLVIEDAPAGVEAAKKAGM 414

Query: 261 RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           +CIAVT +   + L EA   +I   +G +S+ DI
Sbjct: 415 KCIAVTNSQQPQALSEA--DMIVDTLGKISVEDI 446


>gi|330810068|ref|YP_004354530.1| transmembrane protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378176|gb|AEA69526.1| Conserved hypothetical protein; putative transmembrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 403

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 7/167 (4%)

Query: 409 ERIQQFVNYISDVENRKTTPIV------PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT 462
           E + + ++Y+       + P +      P     + WLN+ PL     LKGKVV++DFWT
Sbjct: 231 ENVPKAIDYVVSKAGASSMPALESQGAMPALDGAVQWLNSPPLS-SESLKGKVVLVDFWT 289

Query: 463 YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           Y CINC H LP +    KKY+     V+GVH+ ++  EK ++ +R  V +  I +PV  D
Sbjct: 290 YDCINCQHTLPYVNGWAKKYEKDGLVVIGVHTPEYGYEKIIDNVREQVRKLDIHYPVAID 349

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
               +WR      WP    +   G++     GEG   + + +++  L
Sbjct: 350 NQYAIWRAFNNQYWPAHYFIDAEGQVRYSHFGEGRYGEQEQVIQQLL 396


>gi|344205906|ref|YP_004791047.1| cytochrome c biogenesis protein transmembrane region
           [Stenotrophomonas maltophilia JV3]
 gi|343777268|gb|AEM49821.1| cytochrome c biogenesis protein transmembrane region
           [Stenotrophomonas maltophilia JV3]
          Length = 589

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL   + L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 271 LPALDGATGWLNSPPLS-AQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E+D   +  AV +  + +PV  D    +WR      WP    V   G + 
Sbjct: 330 VGVHTPEFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIR 389

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 390 GHQFGEGNYARSEQMIRRLLAEAGQTNL 417


>gi|398838225|ref|ZP_10595507.1| cytochrome c biogenesis protein [Pseudomonas sp. GM102]
 gi|398116787|gb|EJM06545.1| cytochrome c biogenesis protein [Pseudomonas sp. GM102]
          Length = 403

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 409 ERIQQFVNY-ISDVENRKTTPI----VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E I + V+Y IS V    T       +P     ++WLN+  L     L+GKVV++DFWTY
Sbjct: 231 ETIPKVVDYFISKVRADSTMDAAKGAMPSLSGAVEWLNSPALS-NDALRGKVVLVDFWTY 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC H LP ++   KKY+     V+GVH+ ++  E+ +  +R+ V + GI++PV  D 
Sbjct: 290 DCINCQHTLPYVKDWAKKYEKDGLVVIGVHTPEYGYERIINNVRDQVKKLGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           +  +WR      WP   ++   G++     GEG  +  + ++   L
Sbjct: 350 NYAIWRAFNNQYWPAHYLIDAKGQVRYTHFGEGRYETQEQMIRQLL 395


>gi|420253457|ref|ZP_14756510.1| cytochrome c biogenesis protein [Burkholderia sp. BT03]
 gi|398052169|gb|EJL44458.1| cytochrome c biogenesis protein [Burkholderia sp. BT03]
          Length = 586

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+G V V++FWTY CINC+  LP L+    +Y++    V
Sbjct: 271 LPSLDGAESWLNSPPLT-SDALRGNVAVVNFWTYSCINCLRTLPYLKTWSDRYRNDGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E D   ++ AV   G+ +PV  D    +W+  G   WP F +V   G++ 
Sbjct: 330 VGVHTPEFAFEHDPSNVKRAVADLGVRYPVAIDNGYKIWQAFGNQYWPAFYIVDAQGRIR 389

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   + + +++  L
Sbjct: 390 YHHFGEGGYAEAEKVIQQLL 409


>gi|312130598|ref|YP_003997938.1| HAD-superfamily hydrolase [Leadbetterella byssophila DSM 17132]
 gi|311907144|gb|ADQ17585.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Leadbetterella
           byssophila DSM 17132]
          Length = 229

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AVLFDMDGVL NSE   R+A    F ++G+EVT E +  F G    +    +     V
Sbjct: 12  LEAVLFDMDGVLVNSEPLHRKAFFQTFVDLGIEVTEEQYYSFSGASTQHIADAL-----V 66

Query: 139 KGFDSEAA------KKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADR 192
             F+ + +      KKR +  + + +         PG  +L+N  K  G+K+ VASSA R
Sbjct: 67  NHFELQVSPQYIIDKKRAY--FKELFFNDQEFDLLPGVRDLLNHYKDNGIKMVVASSASR 124

Query: 193 IKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252
           + +       G+  S F   VS    E  KP P+IFL A+ +   P   C+VIEDA  G+
Sbjct: 125 VTIQMVFDRFGIE-SYFLGRVSGADLEASKPHPEIFLKAAGLTQTPVEACMVIEDATNGI 183

Query: 253 QAAKAAQMRCIA 264
            AA  A + C A
Sbjct: 184 LAAHRAGIFCAA 195


>gi|374310643|ref|YP_005057073.1| cytochrome c biogenesis protein transmembrane region [Granulicella
           mallensis MP5ACTX8]
 gi|358752653|gb|AEU36043.1| cytochrome c biogenesis protein transmembrane region [Granulicella
           mallensis MP5ACTX8]
          Length = 576

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W+N+ PL     L+GKVV++DFWTY CINC+  LP ++    KYKD    V+GVH+ +F 
Sbjct: 271 WINSPPLT-PESLRGKVVLVDFWTYSCINCIRSLPYIKAWYAKYKDDGLVVIGVHTPEFP 329

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            EKD   ++ AV   G+ +PV  D D  +WR      WP    +   G +     GEG+ 
Sbjct: 330 FEKDEANVQKAVRDLGVLYPVAMDNDYRIWRNFNNQYWPAHYFIDATGHVRYHHFGEGNY 389

Query: 559 KDLDDLVEAAL 569
            + +  +   L
Sbjct: 390 DESEKWIRGLL 400


>gi|347539220|ref|YP_004846645.1| redoxin domain containing protein [Pseudogulbenkiania sp. NH8B]
 gi|345642398|dbj|BAK76231.1| redoxin domain protein [Pseudogulbenkiania sp. NH8B]
          Length = 583

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P       WLN+ PL     L+GKVV++DFWTY CINC+  LP L+     Y+D    ++
Sbjct: 268 PALTGATRWLNSPPLSLA-ALRGKVVLVDFWTYSCINCLRTLPYLKSWWDSYQDQGLVII 326

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+D   +R A+   GI +PV  D D ++W       WP   ++   G++  
Sbjct: 327 GVHAPEFAFERDEGNVRKAIRDLGIPYPVAMDNDFSIWNAYHNQYWPAHYLIDAQGRVRD 386

Query: 551 QLAGEG 556
              GEG
Sbjct: 387 HTFGEG 392


>gi|379719861|ref|YP_005311992.1| copper amine oxidase domain-containing protein [Paenibacillus
           mucilaginosus 3016]
 gi|378568533|gb|AFC28843.1| copper amine oxidase domain-containing protein [Paenibacillus
           mucilaginosus 3016]
          Length = 535

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 139/294 (47%), Gaps = 34/294 (11%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
           GL DG+ + + F  P GL+     +L YVAD  NHA+R ID     V T+AG+G  G+  
Sbjct: 116 GLLDGAANASLFQEPLGLSAGPDGSL-YVADAGNHAIRRID-AKGNVTTVAGSGRLGAKD 173

Query: 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI------WEHSTVDGVTR------- 751
               KG +     P DV   P +  +Y+A    H I       E +T+   +R       
Sbjct: 174 G---KGAAAEFYRPGDVAAAP-DGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATP 229

Query: 752 ---AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
              A +GD  +  L         F +P+GI+L      +YV+DS +  IR ++L  G   
Sbjct: 230 GQVAAAGDFADGPLA-----QAKFNEPTGIALDAK-GNLYVSDSGNQRIRYIDLAKGTVT 283

Query: 809 LLAGGDPI--FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
            +AGG       D     G  +G   +  L +P+G+   + G + +ADS NH ++ L   
Sbjct: 284 TVAGGGTAAELKDMYVPGGFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHDVRYL--F 341

Query: 867 SNRVSTLAGIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
             ++STLAG G  K G  DG    A L+ PA +    +G++ +AD+ NN +R L
Sbjct: 342 GGQLSTLAGAGEQKMGLLDGMEGKAGLNRPADVAVLGDGSVLVADSFNNRLRRL 395



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 21/189 (11%)

Query: 740 IWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRA 799
           + E +T  G  R  S +G        + L  SF  P+G+++ PD     V+DS +  IR 
Sbjct: 41  MTELTTAAGTGRLGSANG--------TGLEASFRVPAGLAVLPDGTAA-VSDSRNGVIRK 91

Query: 800 LNLKTGGS-RLLAGGDPIF---PDNLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
           L   TGG   +LAG   +F    D  +  G   DG  +  L Q PLG+    +G +YVAD
Sbjct: 92  L---TGGRVDVLAG---VFYRKDDKGYPVGGLLDGAANASLFQEPLGLSAGPDGSLYVAD 145

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
           + NH I+++D   N V+T+AG G+ G KDG   AA+   P  +  A +G L++ADT  + 
Sbjct: 146 AGNHAIRRIDAKGN-VTTVAGSGRLGAKDGKGAAAEFYRPGDVAAAPDGTLYVADTLGHT 204

Query: 915 IRYLDLNKE 923
           IR +    E
Sbjct: 205 IRRISPQGE 213



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 22/163 (13%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F +P G+S  PD   +YVAD+ + +IR ++ K G    +AG          + G +DG G
Sbjct: 127 FQEPLGLSAGPD-GSLYVADAGNHAIRRIDAK-GNVTTVAGSG--------RLGAKDGKG 176

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA---------SNRV--STLAGIGKAG 880
           +      P  V  A +G +YVAD+  H I+++ P          S RV  +T   +  AG
Sbjct: 177 AAAEFYRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATPGQVAAAG 236

Query: 881 -FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
            F DG    A+ +EP GI     GNL+++D+ N  IRY+DL K
Sbjct: 237 DFADGPLAQAKFNEPTGIALDAKGNLYVSDSGNQRIRYIDLAK 279


>gi|386716950|ref|YP_006183276.1| dipZ protein [Stenotrophomonas maltophilia D457]
 gi|384076512|emb|CCH11093.1| DipZ protein [Stenotrophomonas maltophilia D457]
          Length = 589

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL   + L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 271 LPALDGATGWLNSPPLS-AQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E+D   +  AV +  + +PV  D    +WR      WP    V   G + 
Sbjct: 330 VGVHTPEFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIR 389

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 390 GHQFGEGNYARSEQMIRRLLTEAGQTNL 417


>gi|88601128|gb|ABD46562.1| NHL repeat-containing protein [Vermamoeba vermiformis]
          Length = 309

 Score =  101 bits (251), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 149/319 (46%), Gaps = 20/319 (6%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +AID  +N ++I + N+N I     DG  +   G  G  G RDG    A FN P GL
Sbjct: 5   PRGIAIDKHDN-IYICEWNNNTIRKITPDGVVVTLAGHPGHWGSRDGVGSKARFNGPSGL 63

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGEKGTSQLLNSPWDV 721
             +   N+ YVAD  N+ +R++      V T+AG+ G  GS    GEK      N P  V
Sbjct: 64  DVDTDGNV-YVADYYNNTMRKVT-PEGIVTTIAGHVGQWGSTDGSGEKAR---FNGPSGV 118

Query: 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISL 780
                   + I+    + + + S +DG     +G  G        +     F  PSGI++
Sbjct: 119 RID-TEGNIIISDNNNNTVRKISNIDGNVSTIAGSAGKSAGSEDGNGQQARFFGPSGIAV 177

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
           +PD   I+V D  + +IR++++  G    +AG        + + G  DG  +      P 
Sbjct: 178 APD-GTIFVCDRYNHTIRSISI-VGEVTTIAG-------RVMQPGSADGKLTAARFNQPS 228

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIE 899
           G+   K G ++V+D YNH I+K+ P    V+T+AG+ G  G  +G     +L+ P     
Sbjct: 229 GISVDKIGNLFVSDYYNHTIRKISPLG-EVTTIAGMFGHQGAVEGFGDHIRLNHPFRNTI 287

Query: 900 AQNGNLFIADTNNNIIRYL 918
              GNL+I D  N+I+R L
Sbjct: 288 DSAGNLYICDEYNSIVRKL 306



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 21/205 (10%)

Query: 741 WEHSTV-----DGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
           W ++T+     DGV    +G  G+  + +G  S    F  PSG+ +  D   +YVAD  +
Sbjct: 21  WNNNTIRKITPDGVVVTLAGHPGHWGSRDGVGS-KARFNGPSGLDVDTD-GNVYVADYYN 78

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
           +++R +    G    +AG       ++ ++G  DG G +     P GV     G I ++D
Sbjct: 79  NTMRKVT-PEGIVTTIAG-------HVGQWGSTDGSGEKARFNGPSGVRIDTEGNIIISD 130

Query: 855 SYNHKIKKLDPASNRVSTLAG-IGK-AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           + N+ ++K+      VST+AG  GK AG +DG    A+   P+GI  A +G +F+ D  N
Sbjct: 131 NNNNTVRKISNIDGNVSTIAGSAGKSAGSEDGNGQQARFFGPSGIAVAPDGTIFVCDRYN 190

Query: 913 NIIRYLDLNKEEPELQTLELKGVQP 937
           + IR + +     E+ T+  + +QP
Sbjct: 191 HTIRSISIVG---EVTTIAGRVMQP 212


>gi|337745906|ref|YP_004640068.1| copper amine oxidase domain-containing protein [Paenibacillus
           mucilaginosus KNP414]
 gi|336297095|gb|AEI40198.1| copper amine oxidase domain protein [Paenibacillus mucilaginosus
           KNP414]
          Length = 537

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 139/294 (47%), Gaps = 34/294 (11%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
           GL DG+ + + F  P GL+     +L YVAD  NHA+R ID     V T+AG+G  G+  
Sbjct: 116 GLLDGAANASLFQEPLGLSAGPDGSL-YVADAGNHAIRRID-AKGNVTTVAGSGRLGAKD 173

Query: 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI------WEHSTVDGVTR------- 751
               KG +     P DV   P +  +Y+A    H I       E +T+   +R       
Sbjct: 174 G---KGAAAEFYRPGDVAAAP-DGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATP 229

Query: 752 ---AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
              A +GD  +  L         F +P+GI+L      +YV+DS +  IR ++L  G   
Sbjct: 230 GQVAAAGDFADGPLA-----QAKFNEPTGIALDAK-GNLYVSDSGNQRIRYIDLAKGTVT 283

Query: 809 LLAGGDPI--FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
            +AGG       D     G  +G   +  L +P+G+   + G + +ADS NH ++ L   
Sbjct: 284 TVAGGGTAAELKDMYVPGGFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHAVRYL--F 341

Query: 867 SNRVSTLAGIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
             ++STLAG G  K G  DG    A L+ PA +    +G++ +AD+ NN +R L
Sbjct: 342 GGQLSTLAGAGEQKMGLLDGMEGKAGLNRPADVAVLGDGSVLVADSFNNRLRRL 395



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 21/189 (11%)

Query: 740 IWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRA 799
           + E +T  G  R  S +G        + L  SF  P+G+++ PD     V+DS +  IR 
Sbjct: 41  MTELTTAAGTGRLGSANG--------TGLEASFRVPAGLAVLPDGTAA-VSDSRNGVIRK 91

Query: 800 LNLKTGGS-RLLAGGDPIF---PDNLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
           L   TGG   +LAG   +F    D  +  G   DG  +  L Q PLG+    +G +YVAD
Sbjct: 92  L---TGGRVDVLAG---VFYRKDDKGYPVGGLLDGAANASLFQEPLGLSAGPDGSLYVAD 145

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
           + NH I+++D   N V+T+AG G+ G KDG   AA+   P  +  A +G L++ADT  + 
Sbjct: 146 AGNHAIRRIDAKGN-VTTVAGSGRLGAKDGKGAAAEFYRPGDVAAAPDGTLYVADTLGHT 204

Query: 915 IRYLDLNKE 923
           IR +    E
Sbjct: 205 IRRISPQGE 213



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 22/163 (13%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F +P G+S  PD   +YVAD+ + +IR ++ K G    +AG          + G +DG G
Sbjct: 127 FQEPLGLSAGPD-GSLYVADAGNHAIRRIDAK-GNVTTVAGSG--------RLGAKDGKG 176

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA---------SNRV--STLAGIGKAG 880
           +      P  V  A +G +YVAD+  H I+++ P          S RV  +T   +  AG
Sbjct: 177 AAAEFYRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSRRVVEATPGQVAAAG 236

Query: 881 -FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
            F DG    A+ +EP GI     GNL+++D+ N  IRY+DL K
Sbjct: 237 DFADGPLAQAKFNEPTGIALDAKGNLYVSDSGNQRIRYIDLAK 279


>gi|444360504|ref|ZP_21161728.1| redoxin, partial [Burkholderia cenocepacia BC7]
 gi|443599943|gb|ELT68182.1| redoxin, partial [Burkholderia cenocepacia BC7]
          Length = 341

 Score =  101 bits (251), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 2/156 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 23  LPSLDGAVQWLNSPPLT-AAGLRGKVVLIDFWTYSCINCLRTLPYTTAWARKYAPYGLVV 81

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    +   G++ 
Sbjct: 82  IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFNNEYWPAHYFIDAQGRIR 141

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
               GEG     +  +++ L   G    L N PL L
Sbjct: 142 HHHFGEGEYAQSERAIQSLLAEAGHPDAL-NVPLGL 176


>gi|421480175|ref|ZP_15927819.1| redoxin, partial [Burkholderia multivorans CF2]
 gi|400221581|gb|EJO52024.1| redoxin, partial [Burkholderia multivorans CF2]
          Length = 333

 Score =  101 bits (251), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 15  LPSLDGAVQWLNSPPLT-AAALRGKVVLVDFWTYSCINCLRTLPYTNAWARKYARYGLVV 73

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    V   G++ 
Sbjct: 74  IGVHAPEFAFERDIGNVKKAVRDLGIDYPVAIDNRYAIWRAFNNEYWPAHYFVDAQGRIR 133

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG   + +  ++  L   G    L N P+ L+
Sbjct: 134 RHHFGEGEYAESERAIQQLLAEAGHPDAL-NVPIGLT 169


>gi|387905861|ref|YP_006336198.1| DipZ protein [Burkholderia sp. KJ006]
 gi|387580753|gb|AFJ89467.1| DipZ protein [Burkholderia sp. KJ006]
          Length = 622

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP       KY      V
Sbjct: 304 LPSLNGAVQWLNSPPLT-AAGLRGKVVLVDFWTYSCINCLRTLPYTSAWAHKYARDGLVV 362

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+++  ++ AV   GI +PV  D    +WR      WP    V   G++ 
Sbjct: 363 IGVHAPEFAFERNVGNVKKAVHDLGIDYPVAIDNGYAIWRAFDNEYWPAHYFVDAQGRIR 422

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
               GEG     +  ++A L   G  + L N PL L+
Sbjct: 423 HHHFGEGEYAQSERTIQALLADAGHPEAL-NVPLGLT 458


>gi|190572648|ref|YP_001970493.1| transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190010570|emb|CAQ44179.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 589

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL   + L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 271 LPALDGATGWLNSPPLT-AQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ +F  E+D   +  AV +  + +PV  D    +WR      WP    V   G + 
Sbjct: 330 VGVHTPEFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIR 389

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 390 GHQFGEGNYARSEQVIRRLLTEAGQTNL 417


>gi|456737820|gb|EMF62497.1| DipZ protein [Stenotrophomonas maltophilia EPM1]
          Length = 589

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL  ++ L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 271 LPALDGATGWLNSPPLTAQQ-LRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D   +  AV +  + +PV  D    +WR      WP    V   G + 
Sbjct: 330 IGVHTPEFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIR 389

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 390 GHQFGEGNYARSEQVIRRLLTEAGQTNL 417


>gi|163841553|ref|YP_001625958.1| hypothetical protein RSal33209_2820 [Renibacterium salmoninarum
           ATCC 33209]
 gi|162955029|gb|ABY24544.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 115

 Score =  101 bits (251), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 2/91 (2%)

Query: 439 WLNTAPLQFR-RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           WLNT       + L+GK+V+LDFWT+CCINC+HVL +L  LE+KY D+  T VGVHS KF
Sbjct: 26  WLNTGGQSLDLQALRGKIVLLDFWTFCCINCLHVLDELRPLEQKYADVLVT-VGVHSPKF 84

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528
           ++E D  A+  AV RY I HPV++D ++  W
Sbjct: 85  EHEADPVALAAAVERYEIQHPVLDDPELVTW 115


>gi|399002024|ref|ZP_10704721.1| cytochrome c biogenesis protein [Pseudomonas sp. GM18]
 gi|398125931|gb|EJM15390.1| cytochrome c biogenesis protein [Pseudomonas sp. GM18]
          Length = 403

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+  L     L+GKVV++DFWTY CINC H LP ++   KKY+     V
Sbjct: 257 MPLLSGAVEWLNSPALS-NDSLRGKVVLVDFWTYDCINCQHTLPYVKDWAKKYEKDGLVV 315

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ L+ +R+ V + GI++PV  D +  +WR      WP   ++   G++ 
Sbjct: 316 IGVHTPEYGYERILDNVRDQVQKLGITYPVAIDNNYAIWRAFDNQYWPAHYLIDAKGQVR 375

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + ++   L
Sbjct: 376 YSHFGEGRYETQEQMIRQLL 395


>gi|325110177|ref|YP_004271245.1| hypothetical protein Plabr_3626 [Planctomyces brasiliensis DSM
           5305]
 gi|324970445|gb|ADY61223.1| NHL repeat containing protein [Planctomyces brasiliensis DSM 5305]
          Length = 370

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 154/308 (50%), Gaps = 18/308 (5%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFNRPQGLAYNAKKNLLY 672
           L++ ++ ++ I   DL  N +  +  +GE+G     GS  +A  + P  + ++ + N+ +
Sbjct: 69  LYVCETANHVIRRIDLKTNKVTTVAGTGEKGYSGDGGSALEAKLDEPYEIRFDKQGNMFF 128

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYKPINEKVY 731
           V +  N+ +R +D     + T+AG G KG  + G G+  T    N P  +C+      +Y
Sbjct: 129 V-EMLNNIVRRVDAKTGVISTVAGTGEKG--FSGDGKAATEATFNRPHSICFDSAGH-LY 184

Query: 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNL-NGSSSLNTSFAQPSGISLSPDFMEIYVA 790
           I   G H++       G+   + G G +  L +G+    T  + P   +L  D   +++A
Sbjct: 185 ICDIGNHRVRVVEARTGIVDTYLGTGKQARLPDGARVGRTPVSGPR--ALDFDGENMWLA 242

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL-LQHPLGVYCAKNGQ 849
             E +++  ++++ G    +AG   +   N +   + DG  + +  L  P G+   K G 
Sbjct: 243 LREGNAVYRIDVERGLLHHVAG---LGGKNAY---EGDGRPARLARLAGPKGISVDKQGN 296

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAG-FKDGAALAAQLSEPAGIIEAQNGNLFIA 908
           I++AD+ +H I+++D  +  ++TL G GK G   DG  L  +L+ P G+  A +G ++I 
Sbjct: 297 IFLADTESHTIRRIDGQTGIITTLVGNGKKGDGPDGNPLECKLNRPHGVFVAADGKVYIG 356

Query: 909 DTNNNIIR 916
           D++N+ +R
Sbjct: 357 DSSNHRVR 364



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)

Query: 816 IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
           I  D    +   +G   E   + P G+    +G +YV ++ NH I+++D  +N+V+T+AG
Sbjct: 35  ILGDGKAGYTGDNGSADEAQCEQPFGLVIGPDGALYVCETANHVIRRIDLKTNKVTTVAG 94

Query: 876 IGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            G+ G+    G+AL A+L EP  I   + GN+F  +  NNI+R +D
Sbjct: 95  TGEKGYSGDGGSALEAKLDEPYEIRFDKQGNMFFVEMLNNIVRRVD 140



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 866 ASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           A  +V T+ G GKAG+   +G+A  AQ  +P G++   +G L++ +T N++IR +DL
Sbjct: 28  AEGKVITILGDGKAGYTGDNGSADEAQCEQPFGLVIGPDGALYVCETANHVIRRIDL 84


>gi|423091993|ref|ZP_17079801.1| HAD hydrolase, family IA, variant 3 [Clostridium difficile
           70-100-2010]
 gi|357554788|gb|EHJ36489.1| HAD hydrolase, family IA, variant 3 [Clostridium difficile
           70-100-2010]
          Length = 226

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 97/192 (50%), Gaps = 13/192 (6%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGV-----A 133
           V  ++FDMDGVL +SE  S    ++ F + G  +T E +   MG      + G+     +
Sbjct: 4   VEGIIFDMDGVLFDSERISLEFWMETFEKYGYTMTKEIYTSVMGRNRKGIIEGLTDIYDS 63

Query: 134 SVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRI 193
           SV  +  +D +   K   E    K A    G+      ELI+  K  G K+AVA+S  R 
Sbjct: 64  SVPIIDLYDEKT--KNMIEFMERKGAPIKLGVN-----ELISFLKENGYKMAVATSTKRE 116

Query: 194 KVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
           +    LA A L    FDAIV  D   N KP P+IFL A+K +NV    CIVIED+  GV+
Sbjct: 117 RAVKRLAKANLK-DYFDAIVCGDDVVNSKPNPEIFLKAAKKINVNPKNCIVIEDSPMGVE 175

Query: 254 AAKAAQMRCIAV 265
           AA    +RCI V
Sbjct: 176 AAYNGGIRCINV 187


>gi|270159317|ref|ZP_06187973.1| cytochrome c biogenesis protein [Legionella longbeachae D-4968]
 gi|289165861|ref|YP_003455999.1| cytochrome C biogenesis protein [Legionella longbeachae NSW150]
 gi|269987656|gb|EEZ93911.1| cytochrome c biogenesis protein [Legionella longbeachae D-4968]
 gi|288859034|emb|CBJ12963.1| putative cytochrome C biogenesis protein [Legionella longbeachae
           NSW150]
          Length = 546

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 1/118 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           W+N+ PL  + DLKGKVV++DFWTY CINC+  LP ++   K+Y      ++GVH+ +FD
Sbjct: 258 WINSPPLHIK-DLKGKVVLVDFWTYSCINCLRTLPYIKDWYKRYHKQGLVIIGVHTPEFD 316

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
            EK    +  AV  YGI +PV  D     W     + WP   ++   G ++ +  GEG
Sbjct: 317 FEKKFTNVEAAVKLYGILYPVALDNQYVTWNNYENHFWPAHYLINKKGDVVYKHFGEG 374


>gi|408823686|ref|ZP_11208576.1| cytochrome c biogenesis protein transmembrane region [Pseudomonas
           geniculata N1]
          Length = 589

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL   + L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 271 LPALDGATGWLNSPPLA-AQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D   +  AV +  + +PV  D    +WR      WP    V   G + 
Sbjct: 330 IGVHTPEFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIR 389

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 390 GHQFGEGNYARSEQMIRRLLTEAGQTNL 417


>gi|398897488|ref|ZP_10648149.1| cytochrome c biogenesis protein [Pseudomonas sp. GM55]
 gi|398176704|gb|EJM64411.1| cytochrome c biogenesis protein [Pseudomonas sp. GM55]
          Length = 405

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 409 ERIQQFVNYI-----SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E + + V+Y+     +D         +P     +DWLN+ P      LKGKVV++DFWT+
Sbjct: 231 ETVPKVVDYLVSKVKADSAMDNAQGAMPSLSGAVDWLNS-PALTNEALKGKVVLVDFWTF 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ ++  V  YGI++PV  D 
Sbjct: 290 DCINCKHTLPYVKDWAKKYEKDGLVVIGVHTPEYGFERIIDNVKAKVKEYGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           +  +WR      WP   ++   G++     GEG     + +++  L
Sbjct: 350 NYAIWRNFDNQYWPAHYLIDAKGQVRYTHFGEGSYDTQEKMIQQLL 395


>gi|407709413|ref|YP_006793277.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           phenoliruptrix BR3459a]
 gi|407238096|gb|AFT88294.1| cytochrome c biogenesis protein transmembrane region [Burkholderia
           phenoliruptrix BR3459a]
          Length = 604

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 11/171 (6%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+ P +   DL+GKVV+++FWTY CINC+  LP L+    +Y+     V
Sbjct: 289 LPTLSGAVEWLNSPP-RTPADLRGKVVIVNFWTYSCINCLRTLPYLKAWSNRYRAQGLVV 347

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E ++  ++ A     I +P+  D ++ +WR      WP F +V  +G + 
Sbjct: 348 IGVHAPEFAFEHNVANVKRAAADLHIDYPIAVDNNLAVWRAFDNQYWPAFYIVDAHGDIR 407

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL------SLEKDNDPR 594
               GEG     + ++   L   G   L    P P        +E   DPR
Sbjct: 408 YHQFGEGGYDKSERVIRQLLADAGHATL----PAPAGAARASGIEAAADPR 454


>gi|290995436|ref|XP_002680301.1| predicted protein [Naegleria gruberi]
 gi|284093921|gb|EFC47557.1| predicted protein [Naegleria gruberi]
          Length = 699

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 175/364 (48%), Gaps = 55/364 (15%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQI------GSSGEEGLRDGSFDDATFNRPQGLAYN 665
           NN ++I+D  +NRI    L+   IV I      GSSG+ GL      +A  NRP  + + 
Sbjct: 21  NNEVYIADCFNNRIRKI-LENGTIVTIAGNGTKGSSGDNGLAT----NAQLNRPYSV-FV 74

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
           +  N +Y+AD  N+ +R+I   N  + T+AGNG  G     G    +QL  +P  V +  
Sbjct: 75  SSNNEVYIADQGNNRIRKI-LENGNIITIAGNGIHGFSGDNGLATNAQLY-TPCSV-FVS 131

Query: 726 INEKVYIAMAGQH---QIWEHSTVDGVT----RAFSGDGYERNLNGSSSLNTSFAQPSGI 778
            N +VYIA  G H   +I E+  +  +       FSGD     L  ++ LN+S++    +
Sbjct: 132 SNNEVYIADQGNHRIRKILENGNIVTIAGNGIHGFSGD---NGLATNAQLNSSYS----V 184

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-------GD-------PIFPDNLFKF 824
            +S +  E+Y+AD  ++ IR + L+ G    +AG       GD        I  + +  F
Sbjct: 185 FVSSN-NEVYIADYFNNRIRKI-LENGNIITIAGNGTHGFNGDNENGNIITIAGNGIHGF 242

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG 884
              +G+ +   L HP  V+ + N ++Y+AD YN++I+K+    N + T+AG G AGF   
Sbjct: 243 NGDNGLATNARLNHPFSVFVSSNNEVYIADYYNNRIRKILENGN-IITIAGNGTAGFSGD 301

Query: 885 AALAAQLSEPAG-IIEAQNGNLFIADTNNNIIRYLDLNKE-EPELQTLELKGVQPPTPKS 942
           +    +     G  +   NGNL      ++ I + +L K    EL  L + G  P   K+
Sbjct: 302 SPFDIRTYPHIGNKLLTGNGNL------HSKIEFHNLKKHSRDELFGLPIYGFIPLIEKT 355

Query: 943 RSPK 946
            SPK
Sbjct: 356 -SPK 358



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 135/300 (45%), Gaps = 65/300 (21%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRT---------LAGNGTKGSDY 704
           A  NRP  + + +  N +Y+AD            N+ +R          +AGNGTKGS  
Sbjct: 8   AQLNRPNNV-FVSSNNEVYIADC----------FNNRIRKILENGTIVTIAGNGTKGSSG 56

Query: 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH---QIWEHSTVDGVT----RAFSGDG 757
             G    +Q LN P+ V +   N +VYIA  G +   +I E+  +  +       FSGD 
Sbjct: 57  DNGLATNAQ-LNRPYSV-FVSSNNEVYIADQGNNRIRKILENGNIITIAGNGIHGFSGD- 113

Query: 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF 817
                NG ++ N     P  + +S +  E+Y+AD  +  IR + L+ G    +AG     
Sbjct: 114 -----NGLAT-NAQLYTPCSVFVSSN-NEVYIADQGNHRIRKI-LENGNIVTIAG----- 160

Query: 818 PDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL-------------- 863
            + +  F   +G+ +   L     V+ + N ++Y+AD +N++I+K+              
Sbjct: 161 -NGIHGFSGDNGLATNAQLNSSYSVFVSSNNEVYIADYFNNRIRKILENGNIITIAGNGT 219

Query: 864 -----DPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
                D  +  + T+AG G  GF   +G A  A+L+ P  +  + N  ++IAD  NN IR
Sbjct: 220 HGFNGDNENGNIITIAGNGIHGFNGDNGLATNARLNHPFSVFVSSNNEVYIADYYNNRIR 279



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAAL 887
           + +   L  P  V+ + N ++Y+AD +N++I+K+   +  + T+AG G  G    +G A 
Sbjct: 4   LATSAQLNRPNNVFVSSNNEVYIADCFNNRIRKI-LENGTIVTIAGNGTKGSSGDNGLAT 62

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            AQL+ P  +  + N  ++IAD  NN IR
Sbjct: 63  NAQLNRPYSVFVSSNNEVYIADQGNNRIR 91


>gi|254524123|ref|ZP_05136178.1| cytochrome c biogenesis protein, transmembrane region
           [Stenotrophomonas sp. SKA14]
 gi|219721714|gb|EED40239.1| cytochrome c biogenesis protein, transmembrane region
           [Stenotrophomonas sp. SKA14]
          Length = 588

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL   + L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 270 LPALDGATGWLNSPPLT-AQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 328

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D   +  AV +  + +PV  D    +WR      WP    V   G + 
Sbjct: 329 IGVHTPEFAFERDPRNVMKAVQQLKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGDIR 388

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 389 GHQFGEGNYARSEQVIRRLLTEAGQTHL 416


>gi|290979906|ref|XP_002672674.1| predicted protein [Naegleria gruberi]
 gi|284086252|gb|EFC39930.1| predicted protein [Naegleria gruberi]
          Length = 747

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 155/331 (46%), Gaps = 33/331 (9%)

Query: 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEE---GLRDGSFDDATFNR 658
           F G  ++ I   +L+I+D+++NRI   +L  N I  I   G E   G   G        R
Sbjct: 323 FHGITSLAIYGKKLYIADASNNRIRHINLTTNIINTIAGDGSEIYTGGTSGYQSTIALKR 382

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDT-----VRTLAGNGTKGSDYQGGEKGTSQ 713
           P    YN + + L +ADT N+ +  ++ +++      + T+AG      D   G+ G   
Sbjct: 383 PYTSFYNNQTDELLIADTNNYRVLRVNSLSNIESSSLIETVAGVVGLVQDDIDGKLGNET 442

Query: 714 LLNSPWDVCYKPINEKVYIA-----MAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL 768
            LN P+ V    I+  V+I      +    +    STV G     +GD +        S+
Sbjct: 443 ALNYPYSVTQSEISGDVFIGTTFKILKVSKKDKRVSTVAGSVSTLAGDNFN-------SI 495

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
            +   +P+G++ + +  ++Y+ DS + +IR ++ +TG    +AG            G +D
Sbjct: 496 ASQLNEPAGLAFAIN-GDLYICDSINHAIRKIDHETGIISTIAGNGIA--------GFKD 546

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA 888
           G  S       LG+    NG + +AD  N++I+K   +S +V T+AG G AG+     LA
Sbjct: 547 GNASIAQFNSNLGLSVLPNGDLLIADYNNNRIRKYLASSKQVLTIAG-GLAGYSGDGQLA 605

Query: 889 --AQLSEPAGI-IEAQNGNLFIADTNNNIIR 916
             AQL+ P  +   A  G++FIAD  N +IR
Sbjct: 606 TSAQLNHPTDVAYNASTGDVFIADFGNKVIR 636



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 167/354 (47%), Gaps = 43/354 (12%)

Query: 591 NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVV------TDLDGNFIVQIGSSGEE 644
           N+  ++T    F  K  +   N  L+++++ +++IV       T +  N  +  G SG+ 
Sbjct: 256 NNGSVYTYVSSFGPKGIVFDSNGDLYVAEATYDQIVKFSNGVRTVIANNAGITPGFSGD- 314

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
               G+  +ATF+    LA   KK  LY+AD  N+ +R I+   + + T+AG+G++   Y
Sbjct: 315 ---GGNALNATFHGITSLAIYGKK--LYIADASNNRIRHINLTTNIINTIAGDGSE--IY 367

Query: 705 QGGEKG--TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV-------TRAFSG 755
            GG  G  ++  L  P+   Y    +++ IA    +++   +++  +       T A   
Sbjct: 368 TGGTSGYQSTIALKRPYTSFYNNQTDELLIADTNNYRVLRVNSLSNIESSSLIETVAGVV 427

Query: 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS-----ESSSIRALNLKTGGSRLL 810
              + +++G     T+   P  ++ S    ++++  +      S   + ++   G    L
Sbjct: 428 GLVQDDIDGKLGNETALNYPYSVTQSEISGDVFIGTTFKILKVSKKDKRVSTVAGSVSTL 487

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AG      DN      +        L  P G+  A NG +Y+ DS NH I+K+D  +  +
Sbjct: 488 AG------DNFNSIASQ--------LNEPAGLAFAINGDLYICDSINHAIRKIDHETGII 533

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR-YLDLNKE 923
           ST+AG G AGFKDG A  AQ +   G+    NG+L IAD NNN IR YL  +K+
Sbjct: 534 STIAGNGIAGFKDGNASIAQFNSNLGLSVLPNGDLLIADYNNNRIRKYLASSKQ 587



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 6/207 (2%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
           S L  P  LA  I N  L+I DS ++ I   D +   I  I  +G  G +DG+   A FN
Sbjct: 497 SQLNEPAGLAFAI-NGDLYICDSINHAIRKIDHETGIISTIAGNGIAGFKDGNASIAQFN 555

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLN 716
              GL+     +LL +AD  N+ +R+    +  V T+AG G  G  Y G G+  TS  LN
Sbjct: 556 SNLGLSVLPNGDLL-IADYNNNRIRKYLASSKQVLTIAG-GLAG--YSGDGQLATSAQLN 611

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
            P DV Y      V+IA  G   I + S   G+    +G G       +   + S   P 
Sbjct: 612 HPTDVAYNASTGDVFIADFGNKVIRKISNSTGIISTIAGSGLSEYNGDAMPASISNISPY 671

Query: 777 GISLSPDFMEIYVADSESSSIRALNLK 803
           G+S+ P   E++++DS +  IR +N+ 
Sbjct: 672 GLSIHPITGELFISDSVNYLIRKINVN 698



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 45/271 (16%)

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
            N P GLA+ A    LY+ D+ NHA+R+ID     + T+AGNG  G  ++ G    +Q  
Sbjct: 499 LNEPAGLAF-AINGDLYICDSINHAIRKIDHETGIISTIAGNGIAG--FKDGNASIAQF- 554

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHS-------TVDGVTRAFSGDGYERNLNGSSSL 768
           NS   +   P N  + IA    ++I ++        T+ G    +SGDG    L  S+ L
Sbjct: 555 NSNLGLSVLP-NGDLLIADYNNNRIRKYLASSKQVLTIAGGLAGYSGDG---QLATSAQL 610

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-------GD--PIFPD 819
           N     P+ ++ +    ++++AD  +  IR ++  TG    +AG       GD  P    
Sbjct: 611 N----HPTDVAYNASTGDVFIADFGNKVIRKISNSTGIISTIAGSGLSEYNGDAMPASIS 666

Query: 820 NLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
           N+  +G         L  HP+       G+++++DS N+ I+K++  +  +  +AG+   
Sbjct: 667 NISPYG---------LSIHPI------TGELFISDSVNYLIRKINVNNQIIYNVAGVNGT 711

Query: 880 GF--KDGAALAAQLSEPAGIIEAQNGNLFIA 908
                 G A +  L     I  +  G+LFIA
Sbjct: 712 SIWSTTGLANSTSLGSLGFITFSPKGDLFIA 742



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 92/324 (28%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI---- 726
           +++ DT N+ +R++  VN  +  + G+G KG+  +G     S  +   W + + P+    
Sbjct: 185 VFICDTYNYRIRKV--VNGIIYNIVGSGVKGNSAEGSLALYSN-VGEVWAIVFNPVSGEM 241

Query: 727 -----------------------------------NEKVYIAMAGQHQIWEHS----TV- 746
                                              N  +Y+A A   QI + S    TV 
Sbjct: 242 YFSDFDNNAIKYIANNGSVYTYVSSFGPKGIVFDSNGDLYVAEATYDQIVKFSNGVRTVI 301

Query: 747 ---DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
               G+T  FSGD       G ++LN +F   +  SL+    ++Y+AD+ ++ IR +NL 
Sbjct: 302 ANNAGITPGFSGD-------GGNALNATFHGIT--SLAIYGKKLYIADASNNRIRHINLT 352

Query: 804 TGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPL-GVYCAKNGQIYVADSYNHKIK 861
           T     +AG G  I+       G   G  S + L+ P    Y  +  ++ +AD+ N+++ 
Sbjct: 353 TNIINTIAGDGSEIYT------GGTSGYQSTIALKRPYTSFYNNQTDELLIADTNNYRVL 406

Query: 862 KLDPASN-----RVSTLAGI---------GKAGFKDGAALAAQLSEPAGIIEAQ-NGNLF 906
           +++  SN      + T+AG+         GK G +        L+ P  + +++ +G++F
Sbjct: 407 RVNSLSNIESSSLIETVAGVVGLVQDDIDGKLGNE------TALNYPYSVTQSEISGDVF 460

Query: 907 IADTNNNIIRYLDLNKEEPELQTL 930
           I  T     + L ++K++  + T+
Sbjct: 461 IGTT----FKILKVSKKDKRVSTV 480



 Score = 43.5 bits (101), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 46/239 (19%)

Query: 701 GSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER 760
           G  Y  G K T   +  P  V   P+N  VY +    HQ+          R    +G+  
Sbjct: 41  GEMYGEGVKATQVGMTFPLGVAVSPLNGNVYFSDMYNHQV----------RYVDSNGFSH 90

Query: 761 NLNGSSSL-----------NTSFAQPSGISLSPDFMEIYVADSE-------SSSIRALNL 802
              GS +L           N +   PS ++L+ +  E+Y+A+         +S+I   N+
Sbjct: 91  LAAGSPTLAAGESSYFTLANDTLLTPSSVALNSN-GELYIAEYARIRKVYFNSTINNYNM 149

Query: 803 KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
            T            F    F           V L  P  V    NG +++ D+YN++I+K
Sbjct: 150 VT------------FAGGGFDSSSSGVSPLSVSLNQPRCVVPVSNGDVFICDTYNYRIRK 197

Query: 863 LDPASNRVSTLAGIG-KAGFKDGA-ALAAQLSEPAGII-EAQNGNLFIADTNNNIIRYL 918
           +   +  +  + G G K    +G+ AL + + E   I+    +G ++ +D +NN I+Y+
Sbjct: 198 V--VNGIIYNIVGSGVKGNSAEGSLALYSNVGEVWAIVFNPVSGEMYFSDFDNNAIKYI 254


>gi|290971688|ref|XP_002668616.1| predicted protein [Naegleria gruberi]
 gi|284082092|gb|EFC35872.1| predicted protein [Naegleria gruberi]
          Length = 348

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 53/330 (16%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF--DDATFNRPQGLAYNAKKN 669
           NN +FI+D N+  I     +GN IV I  +G++G    +     A  N P G+  ++ K 
Sbjct: 19  NNEVFIADYNNQSIRKVLQNGN-IVTIAGNGDKGFSGDNCLATSAQLNNPIGVFVSSMKK 77

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG--TSQLLNSPWDVCYKPIN 727
           +L                N T+ T+AGNG  G    GG+ G  T+  LN P +V Y   N
Sbjct: 78  ILQ---------------NGTIVTIAGNGKPGF---GGDNGLATNAQLNYPRNV-YVSSN 118

Query: 728 EKVYIA-MAGQH--QIWEHSTVDGV----TRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
            +VYIA    Q   ++ ++  +  +    T+ FSGD      NG ++ N     P+G+ +
Sbjct: 119 NEVYIADFCNQRIRKVLQNGNIITIAGNGTKGFSGD------NGPAT-NAQLNGPAGVFV 171

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           S +  E+Y+AD  +  IR ++ + G    +AG G P F       GD +G+ +   L +P
Sbjct: 172 SNN--EVYIADYSNHVIRKIS-QNGTIVTIAGNGKPGFS------GD-NGLATNAQLYNP 221

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGI 897
            G + + N ++Y++D +NH I+K+   +  + T+AG GK GF   +G A  AQL  P G+
Sbjct: 222 SGTFVSSNNEVYISDCFNHVIRKISQ-NGTIVTIAGNGKGGFSGDNGPATNAQLYSPLGV 280

Query: 898 IEAQNGNLFIADTNNNIIRYLDLNKEEPEL 927
             + +  ++I+D  N+ IR +  N   P L
Sbjct: 281 FVSSDNEVYISDCFNHRIRKIS-NSFSPVL 309



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 36/262 (13%)

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK-GTSQLLNSPWDVCYK 724
           +  N +++AD  N ++R++   N  + T+AGNG KG  + G     TS  LN+P  V   
Sbjct: 17  SSNNEVFIADYNNQSIRKV-LQNGNIVTIAGNGDKG--FSGDNCLATSAQLNNPIGVF-- 71

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD---GYERNLNGSSSLNTSFAQPSGISLS 781
                    ++   +I ++ T+  VT A +G    G +  L  ++ LN     P  + +S
Sbjct: 72  ---------VSSMKKILQNGTI--VTIAGNGKPGFGGDNGLATNAQLN----YPRNVYVS 116

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841
            +  E+Y+AD  +  IR + L+ G    +AG      +    F   +G  +   L  P G
Sbjct: 117 SN-NEVYIADFCNQRIRKV-LQNGNIITIAG------NGTKGFSGDNGPATNAQLNGPAG 168

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIE 899
           V+ + N ++Y+AD  NH I+K+   +  + T+AG GK GF   +G A  AQL  P+G   
Sbjct: 169 VFVSNN-EVYIADYSNHVIRKISQ-NGTIVTIAGNGKPGFSGDNGLATNAQLYNPSGTFV 226

Query: 900 AQNGNLFIADTNNNIIRYLDLN 921
           + N  ++I+D  N++IR +  N
Sbjct: 227 SSNNEVYISDCFNHVIRKISQN 248


>gi|398845361|ref|ZP_10602399.1| thiol-disulfide isomerase-like thioredoxin [Pseudomonas sp. GM84]
 gi|398253661|gb|EJN38780.1| thiol-disulfide isomerase-like thioredoxin [Pseudomonas sp. GM84]
          Length = 177

 Score =  100 bits (250), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           R +   +P       WLN+ PL     LKGKVV++DFWT+ CINC   LP +    ++Y 
Sbjct: 29  RDSYGAMPSLAGASQWLNSPPLD-APVLKGKVVLVDFWTWDCINCQRSLPHVNDWARRYA 87

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D    VVGVH+ ++D E D+  ++  V   GI +PV  D D  +W   G   WP    V 
Sbjct: 88  DQGLVVVGVHTPEYDYEHDVAQLKRKVASLGIGYPVAVDNDHQVWNAWGNQFWPAHYFVD 147

Query: 544 PNGKLLAQLAGEGHRKDLDDLVEAAL 569
             G++     GEG     + +++A L
Sbjct: 148 RQGQVRHVHFGEGDYDGQEKVIQALL 173


>gi|398912559|ref|ZP_10656029.1| cytochrome c biogenesis protein [Pseudomonas sp. GM49]
 gi|398182052|gb|EJM69584.1| cytochrome c biogenesis protein [Pseudomonas sp. GM49]
          Length = 405

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 10/169 (5%)

Query: 409 ERIQQFVNYI-----SDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E + + V+Y+     +D         +P     +DW+N+ P      LKGKVV++DFWT+
Sbjct: 231 ETVPKVVDYLVSKVKADSAMDNAQGAMPSLSGAVDWINS-PALTNEALKGKVVLVDFWTF 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ +R  V  YGI++PV  D 
Sbjct: 290 DCINCKHTLPYVKDWAKKYEKDGLVVIGVHTPEYGFERIIDNVRAKVKEYGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG----HRKDLDDLVEAA 568
           +  +WR      WP   ++   G++     GEG      K +  L+E A
Sbjct: 350 NYAIWRNFDNQYWPAHYLIDAKGQVRYTHFGEGSYDTQEKVIQQLLEEA 398


>gi|444366596|ref|ZP_21166623.1| redoxin [Burkholderia cenocepacia K56-2Valvano]
 gi|443604313|gb|ELT72257.1| redoxin [Burkholderia cenocepacia K56-2Valvano]
          Length = 356

 Score =  100 bits (250), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 2/156 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V
Sbjct: 38  LPSLDGAVQWLNSPPLT-AAGLRGKVVLIDFWTYSCINCLRTLPYTTAWARKYAPYGLVV 96

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  ++ AV   GI +PV  D    +WR      WP    +   G++ 
Sbjct: 97  IGVHAPEFAFERDIGNVKKAVHDLGIDYPVAIDNGYAIWRAFNNEYWPAHYFIDAQGRIR 156

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPL 585
               GEG     +  +++ L   G    L N PL L
Sbjct: 157 HHHFGEGEYAQSERAIQSLLAEAGHPDAL-NVPLGL 191


>gi|387893846|ref|YP_006324143.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas fluorescens A506]
 gi|387163854|gb|AFJ59053.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas fluorescens A506]
          Length = 403

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 12/189 (6%)

Query: 388 NVLFGVNRPSFEQTEGGSSQSERIQQFVNYISDVENRKTTPIV-------PEFPAKLDWL 440
            +L G +       E G  QS  + + V Y+  V   K  P +       P     ++WL
Sbjct: 212 TLLAGASSEGVSVLENGVLQS--VPKVVEYL--VSKAKAEPTLDNARGPMPSLSGAVEWL 267

Query: 441 NTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500
           N+ P      L+GKVV++DFWTY CINC H LP ++   +KY+     V+GVH+ ++  E
Sbjct: 268 NS-PALTSESLRGKVVLVDFWTYDCINCQHTLPYVKDWAQKYQKDGLVVIGVHTPEYGFE 326

Query: 501 KDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKD 560
           + +  +R+ V + GI++PV  D +  +WR      WP   ++   G++     GEG  + 
Sbjct: 327 RIISNVRDEVKKLGITYPVAIDNNYAIWRNFDNQYWPAHYLIDAKGQVRFTHFGEGRYET 386

Query: 561 LDDLVEAAL 569
            + +++  L
Sbjct: 387 QEKMIQQLL 395


>gi|147669019|ref|YP_001213837.1| HAD family hydrolase [Dehalococcoides sp. BAV1]
 gi|146269967|gb|ABQ16959.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Dehalococcoides
           sp. BAV1]
          Length = 456

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 6/214 (2%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV++DMDGV+ +S     RA    F EMG   +  DF    G      +  V   K    
Sbjct: 239 AVIWDMDGVIADSAPLHFRAWQTTFTEMGYTFSEADFYRTFGLRNDMIIYSVLGEKSEAD 298

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
                A ++  E    +YA  +  I FPG ++L+   K+ G ++A+ASSA    +   + 
Sbjct: 299 IIHTLADRK--EHLFREYAGQDIKI-FPGVMDLLKSLKAAGYRMAIASSAPLANIKLVMT 355

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             G+    F A +S       KP P +FL ++  L     EC+VIEDA  GV+AAK A M
Sbjct: 356 KLGIG-DYFLATISEKDVTKGKPNPQVFLLSAARLCTRPEECLVIEDAPGGVEAAKKAGM 414

Query: 261 RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           +C+AVT +   E LKEA   LI   +G + + DI
Sbjct: 415 KCLAVTNSQQPETLKEA--DLIVDTLGKIGVEDI 446


>gi|197118445|ref|YP_002138872.1| lipoprotein [Geobacter bemidjiensis Bem]
 gi|197087805|gb|ACH39076.1| repeat-containing lipoprotein, putative [Geobacter bemidjiensis
           Bem]
          Length = 652

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 42/327 (12%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDL-DGNFIVQIGSSGEEGLRDGSFDDATFNR 658
             +P  +A+   N+ L++SD+ +N I   ++  G      G++G  G  +G+   A F+ 
Sbjct: 127 FNYPSGIALSSDNSTLYVSDTGNNTIRSINVATGAVTTLAGTAGVVGSTNGTGGAARFSS 186

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P G+A +     LYVAD+ NH +R+I   +  V TLAG+G +  D+  G  G +   NSP
Sbjct: 187 PSGVATDGAN--LYVADSLNHRVRKIVLASAAVTTLAGSGLQ--DFADGT-GIAASFNSP 241

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP-SG 777
             +    +   +Y+A  G   +       GV                    ++  QP SG
Sbjct: 242 RGIATDGV--SLYLADQGNSAVRRIIIATGVV-------------------STLVQPASG 280

Query: 778 I----SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
           I     ++ D   ++V D E +++R +++ T     LAG     P      G  D +G  
Sbjct: 281 IESPAGIATDGTSVFVTDLERNNLRKVDIATQAVSTLAGDGGGSP------GSTDAVGGA 334

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSE 893
                P G+     G +YVAD+ N  ++K+  A+   STLAG    G  DG  +AA  + 
Sbjct: 335 ARFSAPAGLVL-NAGVLYVADTGNDLLRKVAVATGASSTLAG--TVGSADGVGVAAAFTS 391

Query: 894 PAGIIEAQNGNLFIADTNNNIIRYLDL 920
           P  +      N+++ADTNN+ +R + +
Sbjct: 392 PYDLTT-DGRNVYVADTNNHTVRQISI 417



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 39/323 (12%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHN--RIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
              PG +A D     L++ D+ ++  R VV        V  G +G  G  DG+   A FN
Sbjct: 72  FSIPGDVASD--GTSLYVVDTGNSVIRKVVLATGATSTVA-GLAGITGSGDGTGAVARFN 128

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGEKGTSQLLN 716
            P G+A ++  + LYV+DT N+ +R I+     V TLAG  G  GS    G  G ++  +
Sbjct: 129 YPSGIALSSDNSTLYVSDTGNNTIRSINVATGAVTTLAGTAGVVGS--TNGTGGAAR-FS 185

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SP  V     N  +Y+A +  H++ +           +G G +   +G + +  SF  P 
Sbjct: 186 SPSGVATDGAN--LYVADSLNHRVRKIVLASAAVTTLAGSGLQDFADG-TGIAASFNSPR 242

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836
           GI  + D + +Y+AD  +S++R + + TG    L     + P +               +
Sbjct: 243 GI--ATDGVSLYLADQGNSAVRRIIIATGVVSTL-----VQPAS--------------GI 281

Query: 837 QHPLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKA--GFKDGAALAAQLSE 893
           + P G+  A +G  ++V D   + ++K+D A+  VSTLAG G    G  D    AA+ S 
Sbjct: 282 ESPAGI--ATDGTSVFVTDLERNNLRKVDIATQAVSTLAGDGGGSPGSTDAVGGAARFSA 339

Query: 894 PAGIIEAQNGNLFIADTNNNIIR 916
           PAG++    G L++ADT N+++R
Sbjct: 340 PAGLVL-NAGVLYVADTGNDLLR 361



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 161/381 (42%), Gaps = 67/381 (17%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A D  N  L+++DS ++R+    L    +  +  SG +   DG+   A+FN P+G+
Sbjct: 187 PSGVATDGAN--LYVADSLNHRVRKIVLASAAVTTLAGSGLQDFADGTGIAASFNSPRGI 244

Query: 663 AYNAKKNLLYVADTENHA------------------------------------------ 680
           A +     LY+AD  N A                                          
Sbjct: 245 ATDGVS--LYLADQGNSAVRRIIIATGVVSTLVQPASGIESPAGIATDGTSVFVTDLERN 302

Query: 681 -LREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV-YIAMAGQH 738
            LR++D     V TLAG+G  GS       G +   ++P  +    +N  V Y+A  G  
Sbjct: 303 NLRKVDIATQAVSTLAGDG-GGSPGSTDAVGGAARFSAPAGLV---LNAGVLYVADTGND 358

Query: 739 QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIR 798
            + + +   G +   +G      +  +  +  + A  S   L+ D   +YVAD+ + ++R
Sbjct: 359 LLRKVAVATGASSTLAG-----TVGSADGVGVAAAFTSPYDLTTDGRNVYVADTNNHTVR 413

Query: 799 ALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNH 858
            +++ TG    LAG     PD   + G  DG G+    + P G+       ++V+D+ N+
Sbjct: 414 QISIATGAVTTLAG----TPD---RAGSGDGTGAAASFRFPSGLTTDGT-NLFVSDTGNN 465

Query: 859 KIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRY 917
            ++K+  A+  VSTLAG  G  G  DGA  AA+   P G+      NL++AD+ NN IR 
Sbjct: 466 TVRKIVIATGAVSTLAGTAGATGSADGAGSAARFHSPNGLTT-DGTNLYVADSGNNAIRK 524

Query: 918 LDLNKEEPELQTLELKGVQPP 938
           + +             G+  P
Sbjct: 525 IVIATGAVSTAVASSAGLSSP 545



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 143/330 (43%), Gaps = 55/330 (16%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDD---- 653
           S ++ P  +A D     +F++D   N +   D+    +  +  +G+ G   GS D     
Sbjct: 279 SGIESPAGIATD--GTSVFVTDLERNNLRKVDIATQAVSTL--AGDGGGSPGSTDAVGGA 334

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A F+ P GL  NA   +LYVADT N  LR++        TLAG  T GS       G + 
Sbjct: 335 ARFSAPAGLVLNA--GVLYVADTGNDLLRKVAVATGASSTLAG--TVGSADG---VGVAA 387

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT--------RAFSGDGYERNLNGS 765
              SP+D+     N  VY+A    H + + S   G          RA SGDG        
Sbjct: 388 AFTSPYDLTTDGRN--VYVADTNNHTVRQISIATGAVTTLAGTPDRAGSGDG-------- 437

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFG 825
           +    SF  PSG  L+ D   ++V+D+ ++++R + + TG    LAG            G
Sbjct: 438 TGAAASFRFPSG--LTTDGTNLFVSDTGNNTVRKIVIATGAVSTLAG-------TAGATG 488

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
             DG GS      P G+       +YVADS N+ I+K+  A+  VST             
Sbjct: 489 SADGAGSAARFHSPNGLTTDGT-NLYVADSGNNAIRKIVIATGAVSTA-----------V 536

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNII 915
           A +A LS P G+       LFI D+ N+ I
Sbjct: 537 ASSAGLSSPYGVTT-DGTTLFITDSGNHRI 565



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 18/157 (11%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKD 883
           G  DG  S+     P G   +    +YV D+ N  I+K+  A+   ST+AG+ G  G  D
Sbjct: 61  GSTDGAASQARFSIP-GDVASDGTSLYVVDTGNSVIRKVVLATGATSTVAGLAGITGSGD 119

Query: 884 GAALAAQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE-LKGVQPPTPK 941
           G    A+ + P+GI + + N  L+++DT NN IR   +N     + TL    GV   T  
Sbjct: 120 GTGAVARFNYPSGIALSSDNSTLYVSDTGNNTIR--SINVATGAVTTLAGTAGVVGSTNG 177

Query: 942 SRSPKRLRRRSSPDAQTIVVDGGLSNEG-NIYLKISL 977
           +    R    SSP         G++ +G N+Y+  SL
Sbjct: 178 TGGAARF---SSPS--------GVATDGANLYVADSL 203


>gi|407362389|ref|ZP_11108921.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas mandelii JR-1]
          Length = 402

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+  L     LKGKVV++DFWTY CINC H LP ++   KKY+     V
Sbjct: 256 MPSLSGAVQWLNSPALS-NDSLKGKVVLVDFWTYDCINCQHTLPYVKDWAKKYEKDGLVV 314

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           VGVH+ ++  E+ ++ +++ V + GI++PV  D +  +WR      WP   ++   G++ 
Sbjct: 315 VGVHTPEYGYERIIDNVKDQVKKLGITYPVAIDNNYAIWRAFDNQYWPAHYLIDAKGQVR 374

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 375 YTHFGEGAYETQEKMIQQLL 394


>gi|452204681|ref|YP_007484810.1| glycoprotease/HAD-superfamily hydrolase like protein
           [Dehalococcoides mccartyi BTF08]
 gi|452111737|gb|AGG07468.1| glycoprotease/HAD-superfamily hydrolase like protein
           [Dehalococcoides mccartyi BTF08]
          Length = 456

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 6/214 (2%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV++DMDGV+ +S     RA    F EMG   +  DF    G      +  V   K    
Sbjct: 239 AVIWDMDGVIADSAPLHFRAWQTTFTEMGYTFSEADFYRTFGLRNDMIIYSVLGEKSEAD 298

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
                A ++  E    +YA  +  I FPG ++L+   K+ G ++A+ASSA    +   + 
Sbjct: 299 IIHTLADRK--EHLFREYAGQDIKI-FPGVMDLLKSLKAAGYRMAIASSAPLANIKLVMT 355

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             G+    F A +S       KP P +FL ++  L     EC+VIEDA  GV+AAK A M
Sbjct: 356 KLGIG-DYFLATISEKDVTKGKPNPQVFLLSAARLCTRPEECLVIEDAPGGVEAAKKAGM 414

Query: 261 RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           +C+AVT +   E LKEA   LI   +G + + DI
Sbjct: 415 KCLAVTNSQQPETLKEA--DLIVDTLGKIGVEDI 446


>gi|395499267|ref|ZP_10430846.1| transmembrane protein [Pseudomonas sp. PAMC 25886]
          Length = 196

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     LKGKVV++DFWTY C+NC   LP +    KKY      V
Sbjct: 48  MPSLDGAVAWLNSPPLT-AEGLKGKVVLVDFWTYDCVNCQRSLPYVNQWAKKYAKDGLVV 106

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +   EK L+ +R  V + GI +PV  D D  +WR      WP        GK+ 
Sbjct: 107 IGVHTPENAYEKVLDNVRTQVRKLGIQYPVAIDNDYRIWRAFDNQYWPAHYFFDATGKVR 166

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   + + +++A L
Sbjct: 167 YSHFGEGRYDNQEKVIQALL 186


>gi|421075909|ref|ZP_15536913.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans JBW45]
 gi|392526021|gb|EIW49143.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pelosinus
           fermentans JBW45]
          Length = 234

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 9/197 (4%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVF-AEMGVEVTVEDFLP-FMGTGEANFLGGVASV 135
           KV AV+FD+DG L +SE P+   A DV   E G++   E+    ++G G    +  +  +
Sbjct: 11  KVKAVIFDLDGTLVDSE-PNYSKADDVLLGEYGIQALSEEMKKKYVGIGTREMMEDLKEI 69

Query: 136 KGV-KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
            G+ +  D   AKK  +  YL+  AK N+ I FP     +   K     +A+AS +    
Sbjct: 70  YGLNESIDILVAKKNKY--YLE-IAKENT-IVFPEMYRFLQFLKENNYPLAIASGSSPEI 125

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           +D  LA   L  + FD I+SA+     KPAPD+F  A+K L VP   C+V+ED+L GV+A
Sbjct: 126 IDMILAITNL-AAYFDVILSAEEVAKGKPAPDVFWEAAKRLGVPFENCLVMEDSLHGVEA 184

Query: 255 AKAAQMRCIAVTTTLSE 271
           AK+A M C+A+   + E
Sbjct: 185 AKSASMYCMALPYMMEE 201


>gi|421530658|ref|ZP_15977127.1| redoxin domain-containing protein [Pseudomonas putida S11]
 gi|402211886|gb|EJT83314.1| redoxin domain-containing protein [Pseudomonas putida S11]
          Length = 148

 Score =  100 bits (249), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK 483
           R +   +P       WLN+APL     LKGKVV++DFWT+ CINC   LP +    ++Y 
Sbjct: 3   RDSYGAMPSLSGASQWLNSAPLD-GPGLKGKVVLVDFWTWDCINCRRSLPHVNEWARRYA 61

Query: 484 DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVG 543
           D    VVGVH+ ++D E D+  +R+ V   GI++PV  D D  +W   G   WP    V 
Sbjct: 62  DQGLVVVGVHTPEYDYEHDVGTLRDKVASLGIAYPVAVDNDYMVWNAWGNQFWPAHYFVD 121

Query: 544 PNGKLLAQLAGEG 556
             G++     G G
Sbjct: 122 RKGQVRHVHFGRG 134


>gi|398860267|ref|ZP_10615916.1| cytochrome c biogenesis protein [Pseudomonas sp. GM79]
 gi|398234952|gb|EJN20808.1| cytochrome c biogenesis protein [Pseudomonas sp. GM79]
          Length = 403

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 6/166 (3%)

Query: 409 ERIQQFVNY-ISDVENRKTTPI----VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E + + V+Y +S V+   T       +P     ++WLN+  L     ++GKVV++DFWTY
Sbjct: 231 ETVPKVVDYFVSKVKADSTVDAAKGAMPSLSGAVEWLNSPALS-NDSVRGKVVLVDFWTY 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC H LP ++   KKY+     V+GVH+ ++  E+ ++ +R+ V + GI++PV  D 
Sbjct: 290 DCINCQHTLPYVKDWAKKYEKDGLVVIGVHTPEYGYERIIDNVRDQVKKLGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
           +  +WR      WP   ++   G++     GEG  +  + ++   L
Sbjct: 350 NYAIWRAFDNQYWPAHYLIDAKGQVRYTHFGEGRYETQEQMIRQLL 395


>gi|224824405|ref|ZP_03697513.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Pseudogulbenkiania ferrooxidans 2002]
 gi|224603824|gb|EEG09999.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Pseudogulbenkiania ferrooxidans 2002]
          Length = 583

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P       WLN+ PL     L+GKVV++DFWTY CINC+  LP L+    +Y+     ++
Sbjct: 268 PALTGATRWLNSPPLSLA-GLRGKVVLVDFWTYSCINCLRTLPYLKSWWDRYQGQGLVII 326

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ +F  E+D   +R A+   GI +PV  D D ++W       WP   ++   G++  
Sbjct: 327 GVHAPEFAFERDEGNVRKAIRDLGIPYPVAMDNDFSIWNAYHNQYWPAHYLIDAQGRVRD 386

Query: 551 QLAGEG 556
              GEG
Sbjct: 387 HTFGEG 392


>gi|86610239|ref|YP_479001.1| NHL repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558781|gb|ABD03738.1| NHL repeat protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 649

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 25/305 (8%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
            +++D   +RI     +G   V  G+ G+ G RDG+ + A F+ PQGL ++ K  L +VA
Sbjct: 353 FYLADRAQHRIFRLSPEGELEVWAGT-GQAGRRDGAANQAQFDSPQGLLWDPKGGL-WVA 410

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           D+ NH LR I+     V T AG    G  Y+ G    +Q    P  +     +  +Y+A 
Sbjct: 411 DSGNHCLRYINL-QRQVSTFAGTCIAG--YRDGGLDRAQF-REPSGLALG-SDGSLYVAD 465

Query: 735 AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
               +I    T  G     +G G   +++G +       QP+ +++  +   +++AD   
Sbjct: 466 RANRRI-RRITPAGEVTTVAGTGQPGSVDGPAE-QAQLLQPTALAVDKEG-NLWIADGH- 521

Query: 795 SSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVA 853
              R   L  GG    L+G +P         G RDG  +E   Q   G+     G ++VA
Sbjct: 522 ---RLRRLSAGGRVTTLSGAEP---------GYRDGPLAEARFQTLGGLAFDAAGNLWVA 569

Query: 854 DSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN 913
           D  NH+I++L P   +VSTLAG  + G++DG    A+  +PAG+    +G++ + D    
Sbjct: 570 DRDNHRIRRLQPG-GQVSTLAGQNQPGWQDGPTSVARFDQPAGLAVLPDGSVVVVDAGLP 628

Query: 914 IIRYL 918
            +R +
Sbjct: 629 GLRRI 633



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
           D  G  S + LQ   G+     G  Y+AD   H+I +L P    +   AG G+AG +DGA
Sbjct: 329 DNTGTESRIYLQQISGIAVDPEGAFYLADRAQHRIFRLSP-EGELEVWAGTGQAGRRDGA 387

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           A  AQ   P G++    G L++AD+ N+ +RY++L ++
Sbjct: 388 ANQAQFDSPQGLLWDPKGGLWVADSGNHCLRYINLQRQ 425



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 11/147 (7%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
             Q SGI++ P+    Y+AD     I  L+ + G   + AG          + G RDG  
Sbjct: 339 LQQISGIAVDPEGA-FYLADRAQHRIFRLSPE-GELEVWAG--------TGQAGRRDGAA 388

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
           ++     P G+     G ++VADS NH ++ ++    +VST AG   AG++DG    AQ 
Sbjct: 389 NQAQFDSPQGLLWDPKGGLWVADSGNHCLRYIN-LQRQVSTFAGTCIAGYRDGGLDRAQF 447

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYL 918
            EP+G+    +G+L++AD  N  IR +
Sbjct: 448 REPSGLALGSDGSLYVADRANRRIRRI 474


>gi|104781518|ref|YP_608016.1| thioredoxin [Pseudomonas entomophila L48]
 gi|95110505|emb|CAK15213.1| putative thioredoxin [Pseudomonas entomophila L48]
          Length = 185

 Score =  100 bits (248), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+GKVV++DFWTY CINC   LP +    ++Y D    V
Sbjct: 43  MPPLAGAQQWLNSPPLD-AAALRGKVVLVDFWTYDCINCRRSLPHVNDWARRYADQGLVV 101

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++D E D+  +R  V + GI +PV  D D  +W   G   WP    V   G++ 
Sbjct: 102 IGVHTPEYDYEHDVGNLRTQVKQLGIDYPVAVDNDYRIWNAWGNQFWPAHYFVDRRGQVR 161

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + ++   L
Sbjct: 162 HVHFGEGNYAGQEQVIRQLL 181


>gi|289432288|ref|YP_003462161.1| HAD-superfamily hydrolase [Dehalococcoides sp. GT]
 gi|288946008|gb|ADC73705.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Dehalococcoides
           sp. GT]
          Length = 456

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 6/214 (2%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV++DMDGV+ +S     RA    F EMG   +  DF    G      +  V   K    
Sbjct: 239 AVIWDMDGVIADSAPLHFRAWQTTFTEMGYTFSEADFYRTFGLRNDMIIYSVLGEKSEAD 298

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
                A ++  E    +YA  +  I FPG ++L+   K+ G ++A+ASSA    +   + 
Sbjct: 299 IIHTLADRK--EHLFREYAGQDIKI-FPGVMDLLKSLKAAGYRMAIASSAPLANIKLVMT 355

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             G+    F A +S       KP P +FL ++  L     EC+VIEDA  GV+AAK A M
Sbjct: 356 KLGIG-DYFLATISEKDVTKGKPNPQVFLLSAARLCARPEECLVIEDAPGGVEAAKKAGM 414

Query: 261 RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           +C+AVT +   E LKEA   LI   +G + + DI
Sbjct: 415 KCLAVTNSQQPETLKEA--DLIVDTLGKIGVEDI 446


>gi|114568006|ref|YP_755160.1| leucine-rich repeat-containing protein [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114338941|gb|ABI69789.1| Leucine-rich repeat (LRR) protein-like protein [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 1351

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 119/238 (50%), Gaps = 24/238 (10%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI------WEHS 744
           + T+AGNGT G    GG   TS  LN+P  V      + +YI      +I       + S
Sbjct: 336 ISTVAGNGTAGYSGDGG-PATSAQLNTPRGVVCDGA-DNLYIVDGDNQRIRKVDTSGKIS 393

Query: 745 TVDGV-TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
           TV G  T  F GDG      G          P G++       +Y+A+S S+ IR ++  
Sbjct: 394 TVAGNGTHWFEGDGGPATAAG-------LYDPIGVACDSS-GNLYIAESNSNCIRKVD-S 444

Query: 804 TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
           +G   ++AG   I       +    G+ +   L +P GV C  +G +Y+AD  NH+I+K+
Sbjct: 445 SGKISVVAG---IVTQGWATYEGDGGLATSARLNYPFGVACDGSGNLYIADRGNHRIRKV 501

Query: 864 DPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           D  S  +ST+AG G AG+    G A +AQL +P G+   +NGNL+I D +NN IR +D
Sbjct: 502 D-TSGIISTVAGNGTAGYSGDGGPATSAQLKDPVGVACDKNGNLYIVDKDNNRIRKVD 558



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 150/307 (48%), Gaps = 38/307 (12%)

Query: 625 IVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREI 684
           ++++ + GN     G++G  G   G    A  N P+G+  +   NL Y+ D +N  +R++
Sbjct: 334 VIISTVAGN-----GTAGYSG-DGGPATSAQLNTPRGVVCDGADNL-YIVDGDNQRIRKV 386

Query: 685 DFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI---- 740
           D  +  + T+AGNGT   +  GG    + L +     C    N  +YIA +  + I    
Sbjct: 387 D-TSGKISTVAGNGTHWFEGDGGPATAAGLYDPIGVACDSSGN--LYIAESNSNCIRKVD 443

Query: 741 --WEHSTVDGVTR----AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
              + S V G+       + GDG    L  S+ LN     P G++       +Y+AD  +
Sbjct: 444 SSGKISVVAGIVTQGWATYEGDG---GLATSARLN----YPFGVACDGS-GNLYIADRGN 495

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
             IR ++     S +   G   +       GD  G  +   L+ P+GV C KNG +Y+ D
Sbjct: 496 HRIRKVDTSGIISTVAGNGTAGYS------GD-GGPATSAQLKDPVGVACDKNGNLYIVD 548

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPAGIIEAQNGNLFIADTNN 912
             N++I+K+D  + ++ST+AG G  G+  DG+ A +AQ+  P G+    NGN++IAD NN
Sbjct: 549 KDNNRIRKVD-NTGKISTVAGNGTGGYAGDGSPATSAQIWVPYGVTFDNNGNMYIADMNN 607

Query: 913 NIIRYLD 919
             IR +D
Sbjct: 608 KRIRKVD 614



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 28/330 (8%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS-FDDAT 655
           ++ L  P  +  D  +N L+I D ++ RI   D  G      G+       DG     A 
Sbjct: 356 SAQLNTPRGVVCDGADN-LYIVDGDNQRIRKVDTSGKISTVAGNGTHWFEGDGGPATAAG 414

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKG-SDYQG-GEKGTSQ 713
              P G+A ++  NL Y+A++ ++ +R++D  +  +  +AG  T+G + Y+G G   TS 
Sbjct: 415 LYDPIGVACDSSGNL-YIAESNSNCIRKVD-SSGKISVVAGIVTQGWATYEGDGGLATSA 472

Query: 714 LLNSPWDV-CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTS 771
            LN P+ V C    N  +YIA  G H+I +  T  G+    +G+G    + +G  + +  
Sbjct: 473 RLNYPFGVACDGSGN--LYIADRGNHRIRKVDT-SGIISTVAGNGTAGYSGDGGPATSAQ 529

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
              P G++   +   +Y+ D +++ IR ++  TG    +AG            G   G G
Sbjct: 530 LKDPVGVACDKN-GNLYIVDKDNNRIRKVD-NTGKISTVAGNGT---------GGYAGDG 578

Query: 832 S---EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAA 886
           S      +  P GV    NG +Y+AD  N +I+K+DP S  ++T+AG G  K     G A
Sbjct: 579 SPATSAQIWVPYGVTFDNNGNMYIADMNNKRIRKVDP-SGIITTVAGNGSWKYSGDGGPA 637

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            AA L    G+    +GNL+IAD+++N IR
Sbjct: 638 EAAGLCNAVGVACDSSGNLYIADSHSNCIR 667



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 34/263 (12%)

Query: 614 RLFISDSNHNRIVVTDLDGNF-----IVQIGSSGEEGLRDGSF-DDATFNRPQGLAYNAK 667
            L+I++SN N I   D  G       IV  G +  EG  DG     A  N P G+A +  
Sbjct: 428 NLYIAESNSNCIRKVDSSGKISVVAGIVTQGWATYEG--DGGLATSARLNYPFGVACDGS 485

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN 727
            NL Y+AD  NH +R++D  +  + T+AGNGT G    GG   ++QL +     C K  N
Sbjct: 486 GNL-YIADRGNHRIRKVD-TSGIISTVAGNGTAGYSGDGGPATSAQLKDPVGVACDK--N 541

Query: 728 EKVYIAMAGQHQI------WEHSTVDGV-TRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
             +YI     ++I       + STV G  T  ++GDG       S + +     P G++ 
Sbjct: 542 GNLYIVDKDNNRIRKVDNTGKISTVAGNGTGGYAGDG-------SPATSAQIWVPYGVTF 594

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
             +   +Y+AD  +  IR ++  +G    +AG      +  +K+    G      L + +
Sbjct: 595 DNN-GNMYIADMNNKRIRKVD-PSGIITTVAG------NGSWKYSGDGGPAEAAGLCNAV 646

Query: 841 GVYCAKNGQIYVADSYNHKIKKL 863
           GV C  +G +Y+ADS+++ I+K+
Sbjct: 647 GVACDSSGNLYIADSHSNCIRKV 669


>gi|206603381|gb|EDZ39861.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 348

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N+ PL  R+DL+GKVV++DFW Y C+NC+   P L+ + ++Y      +
Sbjct: 35  IPSLEGGAAWINSPPLS-RKDLQGKVVLVDFWEYTCVNCVRTFPFLKKMYREYASRGLVI 93

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +G+H+ +F   +    +  AV R+G+ +PVV D  M LW     + WP   +   +G L 
Sbjct: 94  IGIHTPEFTFGRIRSNVETAVHRFGLVYPVVMDNQMVLWDRFHNHYWPAEFLFDRSGTLQ 153

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG    ++  +  AL
Sbjct: 154 YHSIGEGDYAGMEAQIRMAL 173


>gi|410722933|ref|ZP_11362185.1| haloacid dehalogenase superfamily enzyme, subfamily IA [Clostridium
           sp. Maddingley MBC34-26]
 gi|410603752|gb|EKQ58179.1| haloacid dehalogenase superfamily enzyme, subfamily IA [Clostridium
           sp. Maddingley MBC34-26]
          Length = 222

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 9/205 (4%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           ++ AVLFDMDGV+ ++E       V +F + G E+  E +   MGTG  N +     + G
Sbjct: 3   RIEAVLFDMDGVIFDTERVYLEHWVQIFKKYGYEMKKEIYTSVMGTGRENVMRVFKEIYG 62

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
                 +  K++  +  L +  +       PGA E++N  +    K A+A+SA R + + 
Sbjct: 63  DDLPIVQMYKEK--DELLVQAVEEGQVPMKPGAKEILNFLRENNFKTALATSAKRDRTNM 120

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            L    +  S FDA+V  D   N KP P+IFL A++ L++ +  CIV+ED+ AG++AA +
Sbjct: 121 QLKMGKIE-SEFDAVVCGDDITNSKPDPEIFLKAAQRLSISSRNCIVVEDSSAGIKAAYS 179

Query: 258 AQMRCIAVTTTLSEERLKEASPSLI 282
           A+M  + V      E LK+A   ++
Sbjct: 180 AKMMGLHV------EDLKKADEEIL 198


>gi|238024895|ref|YP_002909127.1| putative cytochrome c biogenesis protein [Burkholderia glumae BGR1]
 gi|237879560|gb|ACR31892.1| putative cytochrome c biogenesis protein [Burkholderia glumae BGR1]
          Length = 678

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+GKVV++DFWTY CINC+  LP ++   +KYK+    V
Sbjct: 360 LPPLSGATKWLNSPPLT-NASLRGKVVLIDFWTYSCINCLRTLPYVKAWARKYKNDGLVV 418

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D   ++ A    G+++PV  D    +WR      WP    V   G++ 
Sbjct: 419 IGVHAPEFAFERDPGNVKQATRDLGVTYPVAIDNGYAIWRAFNNEYWPAHYFVDAQGRIR 478

Query: 550 AQLAGEG 556
               GEG
Sbjct: 479 YHHFGEG 485


>gi|73748237|ref|YP_307476.1| glycoprotease [Dehalococcoides sp. CBDB1]
 gi|452203245|ref|YP_007483378.1| glycoprotease/HAD-superfamily hydrolase like protein
           [Dehalococcoides mccartyi DCMB5]
 gi|73659953|emb|CAI82560.1| glycoprotease family protein [Dehalococcoides sp. CBDB1]
 gi|452110304|gb|AGG06036.1| glycoprotease/HAD-superfamily hydrolase like protein
           [Dehalococcoides mccartyi DCMB5]
          Length = 456

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 6/214 (2%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV++DMDGV+ +S     RA    F EMG   +  DF    G      +  V   K    
Sbjct: 239 AVIWDMDGVIADSAPLHFRAWQTTFTEMGYTFSEADFYRTFGLRNDMIIYSVLGEKSEAD 298

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
                A ++  E    +YA  +  I FPG ++L+   K+ G ++A+ASSA    +   + 
Sbjct: 299 IIHTLADRK--EHLFREYAGQDIKI-FPGVMDLLKSLKAAGYRMAIASSAPLANIKLVMT 355

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             G+    F A +S       KP P +FL ++  L     EC+VIEDA  GV+AAK A M
Sbjct: 356 KLGIG-DYFLATISEKDVTKGKPNPQVFLLSAARLCARPEECLVIEDAPGGVEAAKKAGM 414

Query: 261 RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           +C+AVT +   E LKEA   LI   +G + + DI
Sbjct: 415 KCLAVTNSQQPETLKEA--DLIVDTLGKIGVEDI 446


>gi|421861496|ref|ZP_16293498.1| hypothetical protein PPOP_3335 [Paenibacillus popilliae ATCC 14706]
 gi|410828922|dbj|GAC43935.1| hypothetical protein PPOP_3335 [Paenibacillus popilliae ATCC 14706]
          Length = 575

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 157/361 (43%), Gaps = 54/361 (14%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF 651
           D R   +  ++P  L +   N  L I+D+ ++ I   D  G      G   +   + GS+
Sbjct: 81  DGRAERAEFRYPSGL-LAGKNGELLIADTYNHLIRRADAAGQVSTLAGQVAKMRQQYGSW 139

Query: 652 DD-----ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG 706
            D     A FN+P G+A + + NL Y+AD  NH +R++D  +  V T+AG+G  G  ++ 
Sbjct: 140 TDGKGTEARFNQPMGMAEDRQGNL-YIADAGNHVIRKLD-KSGRVTTVAGSGLAG--WRD 195

Query: 707 GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS 766
           G  G+    N P DV     +  +Y+A A  H          V R    +G    LN  S
Sbjct: 196 G-TGSEARFNEPRDVAVAE-DGSLYVADALNH----------VLRRIDANGNVTTLNARS 243

Query: 767 SLNTSFAQPSGISLSPDFME---------------------IYVADSESSSIRALNLKTG 805
                +A P  ++   D+ +                     + V+D+ +  +R +NLK  
Sbjct: 244 KRIVEYA-PGAVAAGGDYADGKLGESKFNEPSSLAFTSSGDLVVSDTGNQRLRLVNLKQK 302

Query: 806 GSRLLAGGDPI------FPD-NLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVADSYN 857
               LAG   +      FPD  L+  G  RD   SE L   P G+     G I VAD +N
Sbjct: 303 YVTTLAGAGSVASYSCKFPDAQLYAAGGYRDSEASEALFNGPAGIAITAEGGIIVADRWN 362

Query: 858 HKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRY 917
           H I+ L   + +V TL G G  G ++G A  A   EP  +    NG + +AD  NN IR 
Sbjct: 363 HAIRYL--FNGKVYTLGGGGGTGHQNGWAEQATFREPVNVAVLSNGTIAVADGFNNSIRL 420

Query: 918 L 918
           +
Sbjct: 421 I 421



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 6/181 (3%)

Query: 741 WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL 800
           W  S V   T  ++G G   +++G +     F  PSG+ L+    E+ +AD+ +  IR  
Sbjct: 59  WSRSPVWYETIDWAGSGVSGSVDGRAE-RAEFRYPSGL-LAGKNGELLIADTYNHLIRRA 116

Query: 801 NLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKI 860
           +   G    LAG           +   DG G+E     P+G+   + G +Y+AD+ NH I
Sbjct: 117 D-AAGQVSTLAGQVAKMRQQYGSW--TDGKGTEARFNQPMGMAEDRQGNLYIADAGNHVI 173

Query: 861 KKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           +KLD  S RV+T+AG G AG++DG    A+ +EP  +  A++G+L++AD  N+++R +D 
Sbjct: 174 RKLDK-SGRVTTVAGSGLAGWRDGTGSEARFNEPRDVAVAEDGSLYVADALNHVLRRIDA 232

Query: 921 N 921
           N
Sbjct: 233 N 233



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 166/410 (40%), Gaps = 36/410 (8%)

Query: 636  VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA 695
            +    SG  G  DG  + A F  P GL    K   L +ADT NH +R  D     V TLA
Sbjct: 69   IDWAGSGVSGSVDGRAERAEFRYPSGL-LAGKNGELLIADTYNHLIRRADAAGQ-VSTLA 126

Query: 696  GNGTKGSDYQGGE---KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
            G   K     G     KGT    N P  +  +     +YIA AG H I +      VT  
Sbjct: 127  GQVAKMRQQYGSWTDGKGTEARFNQPMGMA-EDRQGNLYIADAGNHVIRKLDKSGRVT-T 184

Query: 753  FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG 812
             +G G     +G+ S    F +P  ++++ D   +YVAD+ +  +R ++     + L A 
Sbjct: 185  VAGSGLAGWRDGTGS-EARFNEPRDVAVAED-GSLYVADALNHVLRRIDANGNVTTLNAR 242

Query: 813  GDPIF---PDNLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
               I    P  +   GD  DG   E     P  +    +G + V+D+ N +++ ++    
Sbjct: 243  SKRIVEYAPGAVAAGGDYADGKLGESKFNEPSSLAFTSSGDLVVSDTGNQRLRLVNLKQK 302

Query: 869  RVSTLAGIGK----------------AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
             V+TLAG G                  G++D  A  A  + PAGI     G + +AD  N
Sbjct: 303  YVTTLAGAGSVASYSCKFPDAQLYAAGGYRDSEASEALFNGPAGIAITAEGGIIVADRWN 362

Query: 913  NIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIY 972
            + IRYL  N +   L      G Q    +  + +     +     TI V  G +N   + 
Sbjct: 363  HAIRYL-FNGKVYTLGGGGGTGHQNGWAEQATFREPVNVAVLSNGTIAVADGFNNSIRLI 421

Query: 973  LKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSPEGSAVLHFRR 1022
             + +LPE      EARS  +      +AVI    D  +    SAV+   R
Sbjct: 422  RRYTLPE------EARSSTAASPYARDAVITVYNDRRVETPVSAVIRNNR 465



 Score = 43.5 bits (101), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%)

Query: 853 ADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           A ++N       P        AG G +G  DG A  A+   P+G++  +NG L IADT N
Sbjct: 51  APAFNFAAWSRSPVWYETIDWAGSGVSGSVDGRAERAEFRYPSGLLAGKNGELLIADTYN 110

Query: 913 NIIRYLD 919
           ++IR  D
Sbjct: 111 HLIRRAD 117


>gi|424868418|ref|ZP_18292163.1| hypothetical protein C75L2_00140039 [Leptospirillum sp. Group II
           'C75']
 gi|124516542|gb|EAY58050.1| probable redoxin domain protein [Leptospirillum rubarum]
 gi|387221328|gb|EIJ75905.1| hypothetical protein C75L2_00140039 [Leptospirillum sp. Group II
           'C75']
          Length = 348

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N+ PL  R+DL+GKVV++DFW Y C+NC+   P L+ + ++Y      +
Sbjct: 35  IPSLEGGAAWINSPPLS-RKDLQGKVVLVDFWEYTCVNCVRTFPFLKKMYREYASRGLVI 93

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +G+H+ +F   +    + +AV R+G+ +PVV D  M LW     + WP   +   +G L 
Sbjct: 94  IGIHTPEFTFGRIRSNVESAVHRFGLVYPVVMDNQMVLWDRFHNHYWPAEFLFDRSGTLQ 153

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG    ++  +  AL
Sbjct: 154 YHSIGEGDYDGMEGQIRLAL 173


>gi|410480022|ref|YP_006767659.1| redoxin domain-containing protein [Leptospirillum ferriphilum
           ML-04]
 gi|406775274|gb|AFS54699.1| putative redoxin domain protein [Leptospirillum ferriphilum ML-04]
          Length = 348

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N+ PL  R+DL+GKVV++DFW Y C+NC+   P L+ + ++Y      +
Sbjct: 35  IPSLEGGAAWINSPPLS-RKDLQGKVVLVDFWEYTCVNCVRTFPFLKKMYREYASRGLVI 93

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +G+H+ +F   +    + +AV R+G+ +PVV D  M LW     + WP   +   +G L 
Sbjct: 94  IGIHTPEFTFGRIRSNVESAVHRFGLVYPVVMDNQMVLWDRFHNHYWPAEFLFDRSGTLQ 153

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG    ++  +  AL
Sbjct: 154 YHSIGEGDYAGMEGQIRLAL 173


>gi|86605024|ref|YP_473787.1| NHL repeat-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86553566|gb|ABC98524.1| NHL repeat domain protein [Synechococcus sp. JA-3-3Ab]
          Length = 637

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 24/315 (7%)

Query: 604 GKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLA 663
           G +A+D      +++D   +RI     +G   V  GS G+ G RDG+ D A F+ PQGL 
Sbjct: 331 GGIAVDP-EGFFYLADPAQHRIFRLSPEGELEVWAGS-GKAGHRDGAADQAQFDSPQGLL 388

Query: 664 YNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
           ++ K  L +VAD+ NH LR I      V T AG    G  Y+ GE+  +Q    P+ +  
Sbjct: 389 WDPKGGL-WVADSGNHCLRHISR-QRQVTTFAGTCVAG--YRDGERDEAQF-REPFGLAL 443

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
             ++  +Y+A     +I   +    VT A +G G   + +G +       QP+ +++  +
Sbjct: 444 G-LDGSLYVADRANRRIRRITPTGKVTTA-AGTGQPGSADGPAD-QAQLLQPTALAVDRE 500

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              +++AD          L+    RL A G  +   +  + G RDG  +E   Q   G+ 
Sbjct: 501 G-NLWIADRH-------RLR----RLSADGQ-LTTLSRAEAGYRDGPLAEARFQTLAGLA 547

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
               G +++AD  NH++++L P + +VSTLAG  + G++DG A  A+  +P  ++   +G
Sbjct: 548 FDSAGILWLADRDNHRLRRLQP-NGQVSTLAGQDEPGWQDGPASVARFEQPGDLLVLPDG 606

Query: 904 NLFIADTNNNIIRYL 918
           ++ + D     +R L
Sbjct: 607 SVVVVDAGLPGLRRL 621



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
           S  Q  GI++ P+    Y+AD     I  L+   G   + AG          K G RDG 
Sbjct: 326 SLGQIGGIAVDPEGF-FYLADPAQHRIFRLS-PEGELEVWAGSG--------KAGHRDGA 375

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
             +     P G+     G ++VADS NH ++ +     +V+T AG   AG++DG    AQ
Sbjct: 376 ADQAQFDSPQGLLWDPKGGLWVADSGNHCLRHIS-RQRQVTTFAGTCVAGYRDGERDEAQ 434

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYL 918
             EP G+    +G+L++AD  N  IR +
Sbjct: 435 FREPFGLALGLDGSLYVADRANRRIRRI 462



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           G+     G  Y+AD   H+I +L P    +   AG GKAG +DGAA  AQ   P G++  
Sbjct: 332 GIAVDPEGFFYLADPAQHRIFRLSP-EGELEVWAGSGKAGHRDGAADQAQFDSPQGLLWD 390

Query: 901 QNGNLFIADTNNNIIRYLDLNKE 923
             G L++AD+ N+ +R++   ++
Sbjct: 391 PKGGLWVADSGNHCLRHISRQRQ 413


>gi|428307055|ref|YP_007143880.1| Redoxin domain-containing protein [Crinalium epipsammum PCC 9333]
 gi|428248590|gb|AFZ14370.1| Redoxin domain protein [Crinalium epipsammum PCC 9333]
          Length = 199

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 426 TTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM 485
           T   +PEF     WLN+ PL+   DLK +VV++ FW + CINC   LP +    ++Y   
Sbjct: 56  TKEYLPEFQGLSQWLNSTPLKVT-DLKNQVVLVQFWAFACINCQRTLPYITRWHRQYAAQ 114

Query: 486 PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPN 545
              V+G+H+ +F  E+D+  ++ A+ R+ I++PV  D +   W     N WP   +    
Sbjct: 115 GLKVIGIHTPEFPFERDVNNVKKALKRHKITYPVALDNEYKTWNAYHNNYWPHLFLADRQ 174

Query: 546 GKLLAQLAGEGHRKDLDDLVEAAL 569
           G L     GEG  ++ + L++  L
Sbjct: 175 GFLRYDHIGEGAYQETEQLIKKLL 198


>gi|422003150|ref|ZP_16350382.1| hypothetical protein LSS_06614 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417258114|gb|EKT87507.1| hypothetical protein LSS_06614 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 356

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 146/319 (45%), Gaps = 42/319 (13%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ +V+D   + +R+ID         +GN T  S     
Sbjct: 68  DGTTQTASFKTPFGLEVDTFGNI-FVSDQMANLIRKID--------RSGNVTTLS----- 113

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              TS LL  P  + + PI    Y++     QI++   +D  +  A +  G +   NG  
Sbjct: 114 ---TSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPLDQFSLYAGNSSGVDGFQNGDR 170

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+SF  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 171 -LNSSFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGSVSTLSGG---------TLGY 219

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  +H+I+K+D  +  VST  G G     DG 
Sbjct: 220 LDGDLTSAQFKSPLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGIGADIDGN 279

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
            L A L+ PA I    NG +F++DTN+N +R +D     P+L    +       P + + 
Sbjct: 280 GLNASLNGPAFISLDNNGYMFVSDTNSNKVRIID-----PDLNVSTI-------PHTFTR 327

Query: 946 KRLRRRSSPDAQTIVVDGG 964
               R   P+ + +V D G
Sbjct: 328 IGTVRIDCPNQRLLVADSG 346



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 602 FPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           F G   +D+   R L++ +  ++ I   +L+   +  + S G  G  DG    A F  P 
Sbjct: 175 FKGPFFMDLDRERNLYVGELGNHAIRKINLNSGSVSTL-SGGTLGYLDGDLTSAQFKSPL 233

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           G+ Y+ K + L VAD ++H +R+ID  N TV T  GNG  G+D  G   G +  LN P
Sbjct: 234 GITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI-GADIDG--NGLNASLNGP 288



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +F+SD   N I   D  GN +  + +S               
Sbjct: 73  TASFKTPFGLEVDTFGN-IFVSDQMANLIRKIDRSGN-VTTLSTS------------LLL 118

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  ++  + +ID + D     AGN +    +Q G++  S    
Sbjct: 119 EDPSGIKFDPITGDKYVSCKDSAQIFKIDPL-DQFSLYAGNSSGVDGFQNGDRLNSSF-K 176

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F  
Sbjct: 177 GPF---FMDLDRERNLYVGELGNHAIRKINLNSGSVSTLSG-GTLGYLDGDLT-SAQFKS 231

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P GI+       + VAD +   IR ++LK        G             D DG G   
Sbjct: 232 PLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI--------GADIDGNGLNA 283

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            L  P  +    NG ++V+D+ ++K++ +DP  N VST+
Sbjct: 284 SLNGPAFISLDNNGYMFVSDTNSNKVRIIDPDLN-VSTI 321



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ +   F  I+V+D  ++ IR ++       
Sbjct: 54  VVSLFAGTGIKESIDGTTQ-TASFKTPFGLEVDT-FGNIFVSDQMANLIRKID------- 104

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         + G+   + + +LL+ P G+ +    G  YV+   + +I K+DP  
Sbjct: 105 --------------RSGNVTTLSTSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPL- 149

Query: 868 NRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ +  N+ IR ++LN
Sbjct: 150 DQFSLYAGNSSGVDGFQNGDRLNSSFKGPFFMDLDRERNLYVGELGNHAIRKINLN 205


>gi|398880098|ref|ZP_10635169.1| cytochrome c biogenesis protein [Pseudomonas sp. GM67]
 gi|398883611|ref|ZP_10638561.1| cytochrome c biogenesis protein [Pseudomonas sp. GM60]
 gi|398194287|gb|EJM81364.1| cytochrome c biogenesis protein [Pseudomonas sp. GM67]
 gi|398196230|gb|EJM83244.1| cytochrome c biogenesis protein [Pseudomonas sp. GM60]
          Length = 403

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++W+N+ P      LKGKVV++DFWTY CINC H LP ++   KKY+     V
Sbjct: 257 MPSLSGAVEWINS-PALTNESLKGKVVLVDFWTYDCINCQHTLPYVKDWAKKYEKDGLVV 315

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ +  +++ V + GI++PV  D +  +WR      WP   ++   G++ 
Sbjct: 316 IGVHTPEYGFERIIANVKDQVKKLGITYPVAIDNNYAIWRNFDNQYWPAHYLIDAKGQVR 375

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 376 FTHFGEGRYETQEKMIQQLL 395


>gi|299134941|ref|ZP_07028132.1| Redoxin domain protein [Afipia sp. 1NLS2]
 gi|298589918|gb|EFI50122.1| Redoxin domain protein [Afipia sp. 1NLS2]
          Length = 589

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P +    +KYKD    V
Sbjct: 276 LPSLDGAVEWLNSKPLT-AEALRGKVVLVDFWTYSCINCLRTIPYVRAWAEKYKDDGLMV 334

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EK    ++ A+    I++PV  D + ++WR      WP    +   G++ 
Sbjct: 335 IGVHTPEFAFEKQPANVKKALGDLKINYPVAIDNNYSIWRAFNNMYWPAHYFIDAQGRIR 394

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGK 574
               GEG     ++++   L   GK
Sbjct: 395 HHHFGEGEYAKSEEVIRQLLREAGK 419


>gi|357398471|ref|YP_004910396.1| Hydrolase [Streptomyces cattleya NRRL 8057 = DSM 46488]
 gi|386354502|ref|YP_006052748.1| HAD-superfamily hydrolase [Streptomyces cattleya NRRL 8057 = DSM
           46488]
 gi|337764880|emb|CCB73589.1| Hydrolase [Streptomyces cattleya NRRL 8057 = DSM 46488]
 gi|365805010|gb|AEW93226.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Streptomyces
           cattleya NRRL 8057 = DSM 46488]
          Length = 223

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 9/188 (4%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE-VTVEDFLPFMGTGEANFLGGVASVKGVK 139
           AV+FD+DG L +SE     A   + A  GV+  + E    F+G G    L  + +   + 
Sbjct: 5   AVIFDLDGTLVDSEPAYYEAGRQLLARYGVDGYSWEHHARFVGIGTEETLAALRAEYRIA 64

Query: 140 GFDSE--AAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
               E  A K R   IYL+   +      FPG  EL+ + ++ G+ +AVAS +    + A
Sbjct: 65  APVQELLAGKNR---IYLELAGRTVRA--FPGMRELVERLRAAGVPMAVASGSSPRAIRA 119

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            LA  GL    F   VSA+  E+ KPAPD+FL+A++ L V    C+V+EDA  GV AA  
Sbjct: 120 VLAGTGLD-GAFALTVSAEQVEHGKPAPDVFLAAAERLGVAPERCVVLEDAAPGVTAAAR 178

Query: 258 AQMRCIAV 265
           A MRC+AV
Sbjct: 179 AGMRCVAV 186


>gi|256750622|ref|ZP_05491508.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750462|gb|EEU63480.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 226

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 10/190 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ +SE    +   ++F  +GVE++ ++ L F+GT        V      
Sbjct: 2   IKAVIFDMDGVIIDSEPIHIKLEEELFKSLGVEISEDEHLTFVGTSSYYMWRKVK----- 56

Query: 139 KGFDSEAAKKRFFEI----YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           + F+   + +   EI    YL+   K    I   G  E + +   K  ++AVASS+    
Sbjct: 57  EKFNLSQSVEELVEIDRKRYLEHVLKTGEIIPIEGITETVKKLFEKEYRLAVASSSPIDV 116

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           ++  +   G+    F+ +VS D  EN KPAPDIFL A+  L V   EC+VIED+  GV  
Sbjct: 117 IELVVKKLGID-KCFEVLVSGDYVENSKPAPDIFLYAADKLKVKPHECVVIEDSYNGVHG 175

Query: 255 AKAAQMRCIA 264
           AK A M+ I 
Sbjct: 176 AKKAGMKVIG 185


>gi|443478051|ref|ZP_21067847.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Pseudanabaena biceps PCC 7429]
 gi|443016716|gb|ELS31322.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Pseudanabaena biceps PCC 7429]
          Length = 243

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 1/127 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           + EF     WLNT PL  + DLKG +V++ FWT+ CINC   LP +     +Y      V
Sbjct: 104 LQEFQGISQWLNTNPLSIQ-DLKGNIVLIQFWTFSCINCQRTLPYVTGWHDRYAAKGLKV 162

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E+D+  I++A+ ++GI++PV  D +   W   G   WP   +    G ++
Sbjct: 163 IGVHTPEFAFERDVNNIKDAMQKHGINYPVPIDNEFKTWNAYGNEYWPHIYLADRQGNIV 222

Query: 550 AQLAGEG 556
               GEG
Sbjct: 223 YDRIGEG 229


>gi|170693010|ref|ZP_02884171.1| Redoxin domain protein [Burkholderia graminis C4D1M]
 gi|170142008|gb|EDT10175.1| Redoxin domain protein [Burkholderia graminis C4D1M]
          Length = 183

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           + TP+ P+      W+N +PL   + L+GKVV++DFWTY CINC++ LP ++   K+Y +
Sbjct: 36  RNTPVAPQITGIDTWINGSPLTLSQ-LRGKVVLVDFWTYSCINCVNTLPYVKNWYKQYGN 94

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               V+GVH+ ++  E+D   +R AV ++ I +PV  D     W       WP   +   
Sbjct: 95  QGLQVIGVHTPEYPFERDAGHVRAAVKKFDIQYPVALDNQYATWNAFNNQYWPAVYLFDK 154

Query: 545 NGKLLAQLAGEG 556
            G ++    GEG
Sbjct: 155 TGHVVYSHFGEG 166


>gi|57234800|ref|YP_181140.1| glycoprotease/hydrolase, beta-phosphoglucomutase [Dehalococcoides
           ethenogenes 195]
 gi|57225248|gb|AAW40305.1| glycoprotease family protein/hydrolase, beta-phosphoglucomutase
           family [Dehalococcoides ethenogenes 195]
          Length = 456

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 106/214 (49%), Gaps = 6/214 (2%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV++DMDGV+ +S     RA    FAE+G   +  DF    G      +  V   K    
Sbjct: 239 AVIWDMDGVIADSAPFHMRAWQTTFAEIGYTFSEADFYRTFGLRNDMIIYSVLGEKSDAD 298

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
                A ++  E    +YA     + FPG +EL+   K+ G ++A+ASSA    +   + 
Sbjct: 299 TIHTLADRK--EHLFREYAGQEIQL-FPGVIELLKSLKTAGYRMAIASSAPLANIKLVMT 355

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             G+    F A VS       KP P IFL ++  L     EC+VIEDA AGV+AAK A M
Sbjct: 356 KLGIG-DYFLATVSEKDVTKGKPNPQIFLLSAARLCASPEECLVIEDAPAGVEAAKKAGM 414

Query: 261 RCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           +CIAVT +   + L EA   +I   +G +S+ DI
Sbjct: 415 KCIAVTNSQQPQALSEA--DMIVDTLGKISVEDI 446


>gi|414162493|ref|ZP_11418740.1| hypothetical protein HMPREF9697_00641 [Afipia felis ATCC 53690]
 gi|410880273|gb|EKS28113.1| hypothetical protein HMPREF9697_00641 [Afipia felis ATCC 53690]
          Length = 591

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 4/156 (2%)

Query: 422 ENRKTTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFL 478
           E+ +  P+   +P     ++WLN+ PL     L+GKVV++DFWTY CINC+  +P +   
Sbjct: 267 ESARALPVEGTMPSLDGAVEWLNSKPLT-AEALRGKVVLVDFWTYSCINCLRTIPYVRAW 325

Query: 479 EKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPT 538
            +KYK+    V+GVH+ +F  EK    ++ AV    I +PV  D +  +WR      WP 
Sbjct: 326 AEKYKNDGLVVIGVHTPEFAFEKQPANVKKAVADLKIDYPVAIDNNYAIWRAFDNMYWPA 385

Query: 539 FAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGK 574
              +   G++     GEG     ++++   L   GK
Sbjct: 386 HYFIDAQGRIRHHHFGEGEYAKSEEVIRQLLREAGK 421


>gi|406905604|gb|EKD47021.1| alkyl hydroperoxide reductase/thiol specific antioxidant/Mal
           allergen [uncultured bacterium]
          Length = 306

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 73/129 (56%)

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWTY CINC+H L  L    KKY      ++GVH+ +FD EKD   ++ 
Sbjct: 4   RSLKGKVVLIDFWTYSCINCLHTLEHLRTWHKKYAHKGLVIIGVHTPEFDFEKDEANVKR 63

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           A+    +++PVV D +  +W       WP   ++  +G+++    GEG     ++ ++ A
Sbjct: 64  AIKDLKVNYPVVLDPNYKIWSLYANRWWPRKLLINKDGEIVYDHVGEGGYAQTENAIQEA 123

Query: 569 LLFYGKKKL 577
           L   G++ L
Sbjct: 124 LREIGEEDL 132


>gi|421470991|ref|ZP_15919322.1| hypothetical protein BURMUCF1_B0001 [Burkholderia multivorans ATCC
           BAA-247]
 gi|400226512|gb|EJO56586.1| hypothetical protein BURMUCF1_B0001 [Burkholderia multivorans ATCC
           BAA-247]
          Length = 312

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 2/150 (1%)

Query: 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           + WLN+ PL     L+GKVV++DFWTY CINC+  LP      +KY      V+GVH+ +
Sbjct: 1   MQWLNSPPLT-AAALRGKVVLVDFWTYSCINCLRTLPYTNAWARKYARYGLVVIGVHAPE 59

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           F  E+D+  ++ AV   GI +PV  D    +WR      WP    V   G++     GEG
Sbjct: 60  FAFERDIGNVKKAVHDLGIDYPVAIDNRYAIWRAFNNEYWPAHYFVDAQGRIRRHHFGEG 119

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLS 586
              + +  +++ L   G    L N P+ L+
Sbjct: 120 EYAESERAIQSLLAEAGHPDAL-NVPVGLT 148


>gi|403382146|ref|ZP_10924203.1| copper amine oxidase domain-containing protein [Paenibacillus sp.
           JC66]
          Length = 531

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 33/318 (10%)

Query: 627 VTDLDGNFI--VQ-IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALRE 683
           +TD  G+++  VQ I  +G  G RDG   +A+F  P GLA  A    LYV+DT++H LR 
Sbjct: 31  ITDSSGSWMSSVQTIAGTGSFGARDGDKAEASFRHPSGLA-AAPDGTLYVSDTKSHLLRR 89

Query: 684 IDFVNDTVRTLAGNGTKGSDYQ-----GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH 738
           +D  +  V  LAG+     D Q     G  KG     + P  +     N  +++A  G H
Sbjct: 90  LD--HSGVSLLAGSSFLQEDGQVVDALGDGKGELSSFSEPAGLALDH-NGNLFVADKGNH 146

Query: 739 QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIR 798
            + +    +G    ++G G   + +G++   + F  P  + ++ D   +YVAD+ +  IR
Sbjct: 147 AVRK-VDAEGNVTTYAGQGVLGHKDGTAE-ESLFYAPEDVVVASDGT-VYVADTLNHVIR 203

Query: 799 ALNLKTGGSRLLAGGD---PIFPDNLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
            ++ +   S L A       +FP      GD +DG   E     P G+     G +Y++D
Sbjct: 204 KIDPEGKVSTLNALPQRYIEVFPGEAVLAGDYKDGPLQEAKFNEPTGLAIDHLGNLYISD 263

Query: 855 SYNHKIKKLDPASNRVSTLAG-------------IGKAGFKDGAAL-AAQLSEPAGIIEA 900
           + N  I+ +D A++RVST+AG                 GF DG A   A    P GI   
Sbjct: 264 TGNRVIRYMDLANDRVSTVAGSVQLYDEANSSSLYASGGFSDGHATEEALFMAPRGIAIT 323

Query: 901 QNGNLFIADTNNNIIRYL 918
           + G L IAD+ N+ IRYL
Sbjct: 324 EEGGLVIADSLNHAIRYL 341



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 4/149 (2%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
           SF  PSG++ +PD   +YV+D++S  +R L+    G  LLAG   +  D        DG 
Sbjct: 62  SFRHPSGLAAAPDGT-LYVSDTKSHLLRRLDHS--GVSLLAGSSFLQEDGQVVDALGDGK 118

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
           G       P G+    NG ++VAD  NH ++K+D   N V+T AG G  G KDG A  + 
Sbjct: 119 GELSSFSEPAGLALDHNGNLFVADKGNHAVRKVDAEGN-VTTYAGQGVLGHKDGTAEESL 177

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
              P  ++ A +G +++ADT N++IR +D
Sbjct: 178 FYAPEDVVVASDGTVYVADTLNHVIRKID 206



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 58/346 (16%)

Query: 612 NNRLFISDSNHNRIVVTD------LDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665
           +  L++SD+  + +   D      L G+  +Q      + L DG  + ++F+ P GLA +
Sbjct: 74  DGTLYVSDTKSHLLRRLDHSGVSLLAGSSFLQEDGQVVDALGDGKGELSSFSEPAGLALD 133

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWDVCY 723
              NL +VAD  NHA+R++D     V T AG G  G      + GT++  L  +P DV  
Sbjct: 134 HNGNL-FVADKGNHAVRKVD-AEGNVTTYAGQGVLGH-----KDGTAEESLFYAPEDVVV 186

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN-----------GSSSL---- 768
              +  VY+A           T++ V R    +G    LN           G + L    
Sbjct: 187 AS-DGTVYVA----------DTLNHVIRKIDPEGKVSTLNALPQRYIEVFPGEAVLAGDY 235

Query: 769 ------NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPD--- 819
                    F +P+G+++      +Y++D+ +  IR ++L       +AG   ++ +   
Sbjct: 236 KDGPLQEAKFNEPTGLAID-HLGNLYISDTGNRVIRYMDLANDRVSTVAGSVQLYDEANS 294

Query: 820 -NLFKFGD-RDGMGSE-VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI 876
            +L+  G   DG  +E  L   P G+   + G + +ADS NH I+ L     RV TLAG 
Sbjct: 295 SSLYASGGFSDGHATEEALFMAPRGIAITEEGGLVIADSLNHAIRYL--FEGRVITLAGG 352

Query: 877 GKA--GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
            +A  G +DG     +L+ P  +  A +G++ IAD  NN +R   L
Sbjct: 353 HEAEHGQQDGINGYNRLNHPQDVQVAADGSIIIADAYNNQLRAFQL 398



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 37/289 (12%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
           S    P  LA+D  N  LF++D  ++ +   D +GN     G  G  G +DG+ +++ F 
Sbjct: 122 SSFSEPAGLALD-HNGNLFVADKGNHAVRKVDAEGNVTTYAGQ-GVLGHKDGTAEESLFY 179

Query: 658 RPQGLAYNAKKNLLYVADTENHALREID----------FVNDTVRTLAGNGTKGSDYQGG 707
            P+ +   A    +YVADT NH +R+ID               +    G      DY+ G
Sbjct: 180 APEDVVV-ASDGTVYVADTLNHVIRKIDPEGKVSTLNALPQRYIEVFPGEAVLAGDYKDG 238

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767
               ++  N P  +    +   +YI+  G   I      +      +G     +   SSS
Sbjct: 239 PLQEAKF-NEPTGLAIDHLG-NLYISDTGNRVIRYMDLANDRVSTVAGSVQLYDEANSSS 296

Query: 768 LNTS-------------FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGD 814
           L  S             F  P GI+++ +   + +ADS + +IR   L  G    LAGG 
Sbjct: 297 LYASGGFSDGHATEEALFMAPRGIAITEE-GGLVIADSLNHAIR--YLFEGRVITLAGGH 353

Query: 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
                   + G +DG+     L HP  V  A +G I +AD+YN++++  
Sbjct: 354 EA------EHGQQDGINGYNRLNHPQDVQVAADGSIIIADAYNNQLRAF 396



 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 31/50 (62%)

Query: 870 VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           V T+AG G  G +DG    A    P+G+  A +G L+++DT ++++R LD
Sbjct: 42  VQTIAGTGSFGARDGDKAEASFRHPSGLAAAPDGTLYVSDTKSHLLRRLD 91


>gi|359685014|ref|ZP_09255015.1| hypothetical protein Lsan2_10264 [Leptospira santarosai str.
           2000030832]
          Length = 356

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 146/319 (45%), Gaps = 42/319 (13%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ +V+D   + +R+ID         +GN T  S     
Sbjct: 68  DGTTQTASFKTPFGLEVDTFGNI-FVSDQMANLIRKID--------RSGNVTTLS----- 113

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              TS LL  P  + + PI    Y++     QI++   +D  +  A +  G +   NG  
Sbjct: 114 ---TSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPLDQFSLYAGNSSGVDGFQNGDR 170

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+SF  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 171 -LNSSFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGSVSTLSGG---------TLGY 219

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  +H+I+K+D  +  VST  G G     DG 
Sbjct: 220 LDGDLTSAQFKSPLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGIGADIDGN 279

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
            L A L+ PA I    NG +F++DTN+N +R +D     P+L    +       P + + 
Sbjct: 280 GLNASLNGPAFISLDNNGYMFVSDTNSNKVRIID-----PDLNVSTI-------PHTFTG 327

Query: 946 KRLRRRSSPDAQTIVVDGG 964
               R   P+ + +V D G
Sbjct: 328 IGTVRIDCPNQRLLVADSG 346



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 602 FPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           F G   +D+   R L++ +  ++ I   +L+   +  + S G  G  DG    A F  P 
Sbjct: 175 FKGPFFMDLDRERNLYVGELGNHAIRKINLNSGSVSTL-SGGTLGYLDGDLTSAQFKSPL 233

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           G+ Y+ K + L VAD ++H +R+ID  N TV T  GNG  G+D  G   G +  LN P
Sbjct: 234 GITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI-GADIDG--NGLNASLNGP 288



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 34/286 (11%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +F+SD   N I   D  GN +  + +S               
Sbjct: 73  TASFKTPFGLEVDTFGN-IFVSDQMANLIRKIDRSGN-VTTLSTS------------LLL 118

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  ++  + +ID + D     AGN +    +Q G++  S    
Sbjct: 119 EDPSGIKFDPITGDKYVSCKDSAQIFKIDPL-DQFSLYAGNSSGVDGFQNGDRLNSSF-K 176

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F  
Sbjct: 177 GPF---FMDLDRERNLYVGELGNHAIRKINLNSGSVSTLSG-GTLGYLDGDLT-SAQFKS 231

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P GI+       + VAD +   IR ++LK        G             D DG G   
Sbjct: 232 PLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI--------GADIDGNGLNA 283

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS---TLAGIG 877
            L  P  +    NG ++V+D+ ++K++ +DP  N  +   T  GIG
Sbjct: 284 SLNGPAFISLDNNGYMFVSDTNSNKVRIIDPDLNVSTIPHTFTGIG 329



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ +   F  I+V+D  ++ IR ++       
Sbjct: 54  VVSLFAGTGIQESIDGTTQ-TASFKTPFGLEVDT-FGNIFVSDQMANLIRKID------- 104

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         + G+   + + +LL+ P G+ +    G  YV+   + +I K+DP  
Sbjct: 105 --------------RSGNVTTLSTSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPL- 149

Query: 868 NRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ +  N+ IR ++LN
Sbjct: 150 DQFSLYAGNSSGVDGFQNGDRLNSSFKGPFFMDLDRERNLYVGELGNHAIRKINLN 205


>gi|398995915|ref|ZP_10698783.1| cytochrome c biogenesis protein [Pseudomonas sp. GM21]
 gi|398128473|gb|EJM17862.1| cytochrome c biogenesis protein [Pseudomonas sp. GM21]
          Length = 402

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+ P      LKGKVV++DFWTY CINC H LP ++   KKY+     V
Sbjct: 256 MPSINGAVEWLNS-PALTNESLKGKVVLVDFWTYDCINCQHTLPYVKDWAKKYEKDGLVV 314

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ ++ ++  V + GI++PV  D +  +WR      WP   ++   G++ 
Sbjct: 315 IGVHTPEYGFERIIDNVKEQVKKLGITYPVAIDNNYAIWRNFDNQYWPAHYLIDAKGQVR 374

Query: 550 AQLAGEG----HRKDLDDLVEAA 568
               GEG      K +  L+E A
Sbjct: 375 YTHFGEGSYDTQEKVIQQLLEEA 397


>gi|427706303|ref|YP_007048680.1| alkyl hydroperoxide reductase [Nostoc sp. PCC 7107]
 gi|427358808|gb|AFY41530.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Nostoc sp. PCC 7107]
          Length = 202

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           T ++PEF     WLN++PL    DLKG VV++ FWT+ CINC   LP +    ++Y D  
Sbjct: 60  TQLLPEFQGISQWLNSSPLT-TADLKGSVVLIQFWTFACINCQRTLPYVTRWHQEYADKG 118

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             VVGVH+ +F  EK +  ++ A+ ++ I++PV  D +   W       WP   +    G
Sbjct: 119 LKVVGVHTPEFAYEKVVNNVKQALQKHKITYPVPIDNEFKTWNAYKNEYWPHLFLADRQG 178

Query: 547 KLLAQLAGEGHRKDLDDLVEAAL 569
            +     GEG   D + ++   L
Sbjct: 179 VIRYDHIGEGAYSDTEQMIRQLL 201


>gi|429763259|ref|ZP_19295613.1| HAD hydrolase, family IA, variant 3 [Anaerostipes hadrus DSM 3319]
 gi|429179177|gb|EKY20437.1| HAD hydrolase, family IA, variant 3 [Anaerostipes hadrus DSM 3319]
          Length = 218

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 16/193 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           ++AV+FDMDGV+ +SE  + +A   +  + G+EV       F+GT        +   K  
Sbjct: 2   ITAVIFDMDGVIADSEYFNVKAKHLILKQAGIEVDWHYHDKFLGTTHEYMWTEMK--KEF 59

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGI-------GFPGALELINQCKSKGLKVAVASSAD 191
           +  D E +       Y+D++ K    +         PG ++LI   K KG  +AVASS+ 
Sbjct: 60  ESLDKEVS------YYIDQWVKTRKELINQEGLKPMPGVVDLIRILKEKGFHLAVASSSL 113

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           +  +  N+   G+    F+A +S    EN KP P+IF  A++ +    + CIV+ED+ AG
Sbjct: 114 KEDIMTNMNTFGI-TDCFEAFISGSECENGKPNPEIFQKAAEAIGQKAANCIVVEDSEAG 172

Query: 252 VQAAKAAQMRCIA 264
           V+AAK+A+M+CI 
Sbjct: 173 VKAAKSAKMKCIG 185


>gi|426408916|ref|YP_007029015.1| cytochrome c biogenesis protein,transmembrane region [Pseudomonas
           sp. UW4]
 gi|426267133|gb|AFY19210.1| cytochrome c biogenesis protein,transmembrane region [Pseudomonas
           sp. UW4]
          Length = 405

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 10/169 (5%)

Query: 409 ERIQQFVNY-ISDVENRKTTP----IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTY 463
           E + + V+Y +S V+   T       +P     +DW+N+ P      LKGKVV++DFWT+
Sbjct: 231 ETVPKVVDYLVSKVKADSTMGNAQGAMPSLSGAVDWINS-PALTNEALKGKVVLVDFWTF 289

Query: 464 CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523
            CINC   LP ++   KKY+     V+GVH+ ++  E+ ++ +R+ V  YGI++PV  D 
Sbjct: 290 DCINCKRTLPYVKDWAKKYEKDGLLVIGVHTPEYGFERIIDNVRDKVKEYGITYPVAIDN 349

Query: 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG----HRKDLDDLVEAA 568
           +  +WR      WP   ++   G++     GEG      K +  L+E A
Sbjct: 350 NYAIWRNFDNQYWPAHYIIDAKGQVRYTHFGEGSYDTQEKVIQQLLEEA 398


>gi|387789679|ref|YP_006254744.1| beta-phosphoglucomutase [Solitalea canadensis DSM 3403]
 gi|379652512|gb|AFD05568.1| beta-phosphoglucomutase [Solitalea canadensis DSM 3403]
          Length = 220

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 30/230 (13%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A +FD+DGV+ N+      A   +  E+G ++T  D     G      L  + S+ GV
Sbjct: 4   IKACIFDLDGVIVNTSNYHYLAWKRLTNELGFDITEADNEQLRGVSRMECLRIILSIGGV 63

Query: 139 -----KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD-- 191
                + +D    K  +   YL+   K +     PGA E I   +  GLKVA+AS++   
Sbjct: 64  SVSADQLYDLAEKKNNW---YLEYVQKMDEHEILPGAAEFIQAARESGLKVAIASASKNA 120

Query: 192 -----RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIE 246
                R+K+D          +++DA+V  +     KP PDIFL +++ LNV    CIV E
Sbjct: 121 GIILRRVKLD----------TVYDALVDGNTVNRSKPNPDIFLRSARELNVDPENCIVFE 170

Query: 247 DALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296
           DA++G+QAA  A MR I + + +  +      PSL     G +SL D+ +
Sbjct: 171 DAISGIQAAHNAGMRSIGIGSDIMLKNAHMVVPSL-----GVMSLEDLYS 215


>gi|409197047|ref|ZP_11225710.1| HAD superfamily hydrolase [Marinilabilia salmonicolor JCM 21150]
          Length = 214

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 3/184 (1%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV+FDMDGVL ++EE   +A  +VF+ +GVE+T E          A+      S    K 
Sbjct: 6   AVIFDMDGVLIDTEELWAQAETEVFSSLGVELTAEGLERTRAMTTADVTAFWYSRFPWKH 65

Query: 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLA 200
              E A+++     ++     +  I   G L  I Q KS+  K+ +A+++    + + L 
Sbjct: 66  EPPEVAEQKVVSRVIELIRCTDCTID--GVLPFIEQLKSRNFKIGLATNSPARVIPSVLQ 123

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             GL   MFD + SA+  E  KP P I+L A++ L  P S C+V+ED+L G+QAAK+A M
Sbjct: 124 KTGLE-DMFDVVCSAEHEEKGKPHPAIYLQAARRLKTPPSGCVVVEDSLYGMQAAKSAGM 182

Query: 261 RCIA 264
           R +A
Sbjct: 183 RVVA 186


>gi|423697720|ref|ZP_17672210.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas fluorescens Q8r1-96]
 gi|388004798|gb|EIK66065.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas fluorescens Q8r1-96]
          Length = 403

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 409 ERIQQFVNYISDVENRKTTPIV------PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT 462
           E + + ++Y+       + P +      P     + WLN+ PL     L+GKVV++DFWT
Sbjct: 231 ENVPKAIDYVVSKAGASSMPALESQGAMPALDGAVQWLNSPPLS-SESLRGKVVLVDFWT 289

Query: 463 YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           Y CINC H LP +    KKY+     V+GVH+ ++  EK ++ +R  V +  I +PV  D
Sbjct: 290 YDCINCQHTLPYVNGWAKKYEKDGLVVIGVHTPEYGYEKIIDNVREQVRKLDIHYPVAID 349

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
               +WR      WP    +   G +     GEG   + + +++  L
Sbjct: 350 NQYAIWRAFNNQYWPAHYFIDAKGLVRYSHFGEGRYGEQEQVIQQLL 396


>gi|269102908|ref|ZP_06155605.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268162806|gb|EEZ41302.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 217

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 7/189 (3%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A +FDMDG+L +SE   ++A V+VF ++GV++++ED    MG      +    + +  
Sbjct: 2   LQAAVFDMDGLLVDSEPFWQQAQVEVFTDLGVKISIEDTHKTMGLRIDQVVEFWFNQQPW 61

Query: 139 KGFDSEAAKKRFFEIY--LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
           +G +     +   +    L +  KP      PG +E I  CK  GLK+A+ASS+    ++
Sbjct: 62  QGPNCAEVTQTIVDRVKALVREQKPM----LPGVVEAITCCKESGLKIALASSSPMDLIE 117

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
           A + A  L   +F+A++SA+     KP P+++++A+  L V    C+  ED++ G+ AAK
Sbjct: 118 ATIDALSL-TGLFEAVLSAEHLRYGKPHPEVYINAADALGVKPQHCVAFEDSVNGLLAAK 176

Query: 257 AAQMRCIAV 265
           AAQM+ IAV
Sbjct: 177 AAQMKGIAV 185


>gi|269792668|ref|YP_003317572.1| HAD-superfamily hydrolase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100303|gb|ACZ19290.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 217

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 119/229 (51%), Gaps = 20/229 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANF-------LGG 131
           + A++FD DG+  ++E    +A   V AE GV + +  FL  +GT +          LG 
Sbjct: 2   IRAIVFDFDGLTVDTETAWYQAFSSVLAERGVHLPLARFLQVVGTDDGPLHDFFREALGQ 61

Query: 132 VASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD 191
              VK ++    +AA +R+ EI +D   +P  G+     L+ +      GLKV +ASS+ 
Sbjct: 62  DCDVKAIE----DAAAERYREIMMD--PRPREGV-----LDYLEDAAEMGLKVGMASSSG 110

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
              V + L   G+    F A+V+ +  + +KPAPD+++ A ++L V   E +  ED+L G
Sbjct: 111 ASWVGSYLDRLGIG-GCFHAVVTREQVQRVKPAPDLYVRALELLQVEPHEALAFEDSLNG 169

Query: 252 VQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGGGG 300
           + AA+ A +RC+ V   ++E  L     +L    +G +SL+ +++  GG
Sbjct: 170 LLAARRAGLRCVVVPNRVTES-LPFKGHALRLSSMGEMSLSQVISAVGG 217


>gi|171911526|ref|ZP_02926996.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Verrucomicrobium spinosum DSM 4136]
          Length = 235

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 18/230 (7%)

Query: 65  ETDVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFA-EMGVEVTVE-DFLPFMG 122
           +T + VSS S    + A+LFDMDGVL +SE P     +   A EMG    VE + L F G
Sbjct: 16  KTGLQVSS-SLLAGIKAILFDMDGVLIDSE-PVHATCISTLAVEMGGRALVETELLSFKG 73

Query: 123 TGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGL 182
             +     G+  +    G D+ A  KR F++Y++++A         GA E +      GL
Sbjct: 74  VPDREVAAGLMRLFPDSGRDAPAVMKRAFDLYVERFALVRL---ISGAREFVLAAGESGL 130

Query: 183 KVAVASSA----DRIKVDA-NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237
           ++AVA+SA     R+  DA +L+       +F+ +V+ D  +  KP P+ +L A++ L V
Sbjct: 131 RLAVATSAASSMQRMAFDAFDLSG------LFETVVTGDDVKRGKPDPEPYLLAAERLGV 184

Query: 238 PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIG 287
             ++C+VIED++ GV++ KAA  R + +TT+  +E L  A   ++ +  G
Sbjct: 185 NPAQCLVIEDSINGVKSGKAAGCRVVGLTTSFPKETLLAAGAEVVVEAYG 234


>gi|357011892|ref|ZP_09076891.1| haloacid dehalogenase-like hydrolase [Paenibacillus elgii B69]
          Length = 235

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 2/187 (1%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           ++ AV+FDMDGVL +SE         +F + G+ +T E+   ++G         + +   
Sbjct: 21  ELKAVIFDMDGVLIDSEPIHFLVEQKLFRQFGLRITEEEQHAYVGVPMKEMWKLIRTRHS 80

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
           +     E       E  + +++         G  EL+++ K++GLK AVASS+ R  ++ 
Sbjct: 81  LT-LSEEQLLAGHKEQLIAEFSTAEPFEAMEGLRELLSEIKNRGLKTAVASSSPRQLIET 139

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            LA   L   M D IVS +  +  KP+PDIF+ A+ +L     ECIVIED+  GV+AAK+
Sbjct: 140 VLARLRL-TPMLDVIVSGEEVKQGKPSPDIFIEAASLLQATAGECIVIEDSCNGVRAAKS 198

Query: 258 AQMRCIA 264
           A M CI 
Sbjct: 199 AGMECIG 205


>gi|410448598|ref|ZP_11302672.1| hypothetical protein LEP1GSC068_3151 [Leptospira sp. Fiocruz
           LV3954]
 gi|410017668|gb|EKO79726.1| hypothetical protein LEP1GSC068_3151 [Leptospira sp. Fiocruz
           LV3954]
          Length = 356

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 30/274 (10%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ +V+D   + +R+ID         +GN T  S     
Sbjct: 68  DGTTQTASFKTPFGLEVDTFGNI-FVSDQMANLIRKID--------RSGNVTTLS----- 113

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              TS LL  P  + + PI    Y++     QI++   +D  +  A +  G +   NG  
Sbjct: 114 ---TSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPLDQFSLYAGNSSGVDGFQNGDR 170

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+SF  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 171 -LNSSFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGSVSTLSGG---------TLGY 219

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  +H+I+K+D  +  VST  G G     DG 
Sbjct: 220 LDGDLTSAQFKSPLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGIGANIDGN 279

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            L A L+ PA I    NG +F++DTN+N +R +D
Sbjct: 280 GLNASLNGPAFISLDNNGYMFVSDTNSNKVRIID 313



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 602 FPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           F G   +D+   R L++ +  ++ I   +L+   +  + S G  G  DG    A F  P 
Sbjct: 175 FKGPFFMDLDRERNLYVGELGNHAIRKINLNSGSVSTL-SGGTLGYLDGDLTSAQFKSPL 233

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           G+ Y+ K + L VAD ++H +R+ID  N TV T  GNG  G++  G   G +  LN P
Sbjct: 234 GITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI-GANIDG--NGLNASLNGP 288



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +F+SD   N I   D  GN +  + +S               
Sbjct: 73  TASFKTPFGLEVDTFGN-IFVSDQMANLIRKIDRSGN-VTTLSTS------------LLL 118

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  ++  + +ID + D     AGN +    +Q G++  S    
Sbjct: 119 EDPSGIKFDPITGDKYVSCKDSAQIFKIDPL-DQFSLYAGNSSGVDGFQNGDRLNSSF-K 176

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F  
Sbjct: 177 GPF---FMDLDRERNLYVGELGNHAIRKINLNSGSVSTLSG-GTLGYLDGDLT-SAQFKS 231

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P GI+       + VAD +   IR ++LK        G             + DG G   
Sbjct: 232 PLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI--------GANIDGNGLNA 283

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            L  P  +    NG ++V+D+ ++K++ +DP  N VST+
Sbjct: 284 SLNGPAFISLDNNGYMFVSDTNSNKVRIIDPDLN-VSTI 321



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ +   F  I+V+D  ++ IR ++       
Sbjct: 54  VVSLFAGTGIKESIDGTTQ-TASFKTPFGLEVDT-FGNIFVSDQMANLIRKID------- 104

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         + G+   + + +LL+ P G+ +    G  YV+   + +I K+DP  
Sbjct: 105 --------------RSGNVTTLSTSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPL- 149

Query: 868 NRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ +  N+ IR ++LN
Sbjct: 150 DQFSLYAGNSSGVDGFQNGDRLNSSFKGPFFMDLDRERNLYVGELGNHAIRKINLN 205


>gi|421111981|ref|ZP_15572448.1| hypothetical protein LEP1GSC071_4063 [Leptospira santarosai str.
           JET]
 gi|410802632|gb|EKS08783.1| hypothetical protein LEP1GSC071_4063 [Leptospira santarosai str.
           JET]
          Length = 356

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 146/319 (45%), Gaps = 42/319 (13%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ +V+D   + +R+ID         +GN T  S     
Sbjct: 68  DGTTQTASFKTPFGLEVDTFGNI-FVSDQMANLIRKID--------RSGNVTTLS----- 113

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              TS LL  P  + + PI    Y++     QI++   +D  +  A +  G +   NG  
Sbjct: 114 ---TSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPLDQFSLYAGNSSGVDGFQNGDR 170

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+SF  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 171 -LNSSFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGSVSTLSGG---------ILGY 219

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  +H+I+K+D  +  VST  G G     DG 
Sbjct: 220 LDGDLTSAQFKSPLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGIGADIDGN 279

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
            L A L+ PA I    NG +F++DTN+N +R +D     P+L    +       P + + 
Sbjct: 280 GLNASLNGPAFISLDNNGYMFVSDTNSNKVRIID-----PDLNVSTI-------PHTFTR 327

Query: 946 KRLRRRSSPDAQTIVVDGG 964
               R   P+ + +V D G
Sbjct: 328 IGTVRIDCPNQRLLVADSG 346



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 602 FPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           F G   +D+   R L++ +  ++ I   +L+   +  + S G  G  DG    A F  P 
Sbjct: 175 FKGPFFMDLDRERNLYVGELGNHAIRKINLNSGSVSTL-SGGILGYLDGDLTSAQFKSPL 233

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           G+ Y+ K + L VAD ++H +R+ID  N TV T  GNG  G+D  G   G +  LN P
Sbjct: 234 GITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI-GADIDG--NGLNASLNGP 288



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +F+SD   N I   D  GN +  + +S               
Sbjct: 73  TASFKTPFGLEVDTFGN-IFVSDQMANLIRKIDRSGN-VTTLSTS------------LLL 118

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  ++  + +ID + D     AGN +    +Q G++  S    
Sbjct: 119 EDPSGIKFDPITGDKYVSCKDSAQIFKIDPL-DQFSLYAGNSSGVDGFQNGDRLNSSF-K 176

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F  
Sbjct: 177 GPF---FMDLDRERNLYVGELGNHAIRKINLNSGSVSTLSG-GILGYLDGDLT-SAQFKS 231

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P GI+       + VAD +   IR ++LK        G             D DG G   
Sbjct: 232 PLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI--------GADIDGNGLNA 283

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            L  P  +    NG ++V+D+ ++K++ +DP  N VST+
Sbjct: 284 SLNGPAFISLDNNGYMFVSDTNSNKVRIIDPDLN-VSTI 321



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ +   F  I+V+D  ++ IR ++       
Sbjct: 54  VVSLFAGTGIKESIDGTTQ-TASFKTPFGLEVDT-FGNIFVSDQMANLIRKID------- 104

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         + G+   + + +LL+ P G+ +    G  YV+   + +I K+DP  
Sbjct: 105 --------------RSGNVTTLSTSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPL- 149

Query: 868 NRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ +  N+ IR ++LN
Sbjct: 150 DQFSLYAGNSSGVDGFQNGDRLNSSFKGPFFMDLDRERNLYVGELGNHAIRKINLN 205


>gi|290992224|ref|XP_002678734.1| predicted protein [Naegleria gruberi]
 gi|284092348|gb|EFC45990.1| predicted protein [Naegleria gruberi]
          Length = 1366

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 160/325 (49%), Gaps = 25/325 (7%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFDD-ATFN 657
           LK P K++  + N  L +SD+  + I         + +I  +G  G   DG     A FN
Sbjct: 412 LKDPQKIS-KLSNGDLIVSDTGDHSIKKISYSTGVVTRIAGTGVAGFSGDGGLATLAQFN 470

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
           +P G+A      + Y+AD+ NH +R ID VN  + T+ G  + G    GG   T+  LN+
Sbjct: 471 KPYGIAVTINDEI-YIADSLNHRIRFID-VNGNISTVVGT-SIGFSGDGGLA-TAAKLNA 526

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL-NGSSSLNTSFAQPS 776
           P DV      + +YIA    ++I      +G    F+G+G   ++ +G  +++ + +Q  
Sbjct: 527 PMDVSLSASGD-LYIADRDNYRI-RKVLANGTIVTFAGNGQSGHIGDGGQAISAALSQAY 584

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG--GDPIFPDNLFKFGDRDGMGSEV 834
           G+ +  D  E+Y++DS +  +R +++ +G    +AG    P   DN+        + +  
Sbjct: 585 GVRVVND--EVYISDSNNFKVRKIDV-SGVITTIAGTGAGPFNGDNV--------LATAA 633

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG-AALAAQLSE 893
            L HP  V    NG++ +AD+ N++++ +      VS +AG G A F DG  A +  LS 
Sbjct: 634 NLNHPTDVAFLSNGEMLIADTDNNRVRMVLTNGTIVS-IAGNGTASFSDGRIATSRGLSL 692

Query: 894 PAGIIEAQNGNLFIADTNNNIIRYL 918
           P GI+   +  ++IAD  N  IR L
Sbjct: 693 PTGILVVSDDEIYIADAKNGRIRLL 717



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 33/262 (12%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           L V+DT +H++++I +    V  +AG G  G    GG    +Q  N P+ +    IN+++
Sbjct: 426 LIVSDTGDHSIKKISYSTGVVTRIAGTGVAGFSGDGGLATLAQF-NKPYGIAVT-INDEI 483

Query: 731 YIAMAGQHQI------WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDF 784
           YIA +  H+I         STV G +  FSGDG    L  ++ LN     P  +SLS   
Sbjct: 484 YIADSLNHRIRFIDVNGNISTVVGTSIGFSGDG---GLATAAKLN----APMDVSLSAS- 535

Query: 785 MEIYVADSESSSIRALNLKTGGSRLLAGGDPI-FPDN--LFKFGDRDGMGSEVLLQHPLG 841
            ++Y+AD ++  IR         ++LA G  + F  N      GD  G      L    G
Sbjct: 536 GDLYIADRDNYRIR---------KVLANGTIVTFAGNGQSGHIGD-GGQAISAALSQAYG 585

Query: 842 VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIE 899
           V    N ++Y++DS N K++K+D  S  ++T+AG G   F   +  A AA L+ P  +  
Sbjct: 586 VRVV-NDEVYISDSNNFKVRKID-VSGVITTIAGTGAGPFNGDNVLATAANLNHPTDVAF 643

Query: 900 AQNGNLFIADTNNNIIRYLDLN 921
             NG + IADT+NN +R +  N
Sbjct: 644 LSNGEMLIADTDNNRVRMVLTN 665



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 23/324 (7%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFN 657
            K P KLA  + N  + ++D+  + I   +  G  I  I  +G  G    +G   +A  N
Sbjct: 52  FKDPQKLA-RLSNGDILVTDALGHAIKKINGTG-VITTIAGTGVAGFAGDNGPAINAQVN 109

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
           +P G+A ++   + Y AD+ NH +R+ID   + + T+ G G       GG   T   +N+
Sbjct: 110 KPYGIAVSSNDEI-YFADSMNHRIRKIDITGN-ITTVVGTGANTFSGDGGLA-TDCTMNT 166

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL-NGSSSLNTSFAQPS 776
           P DV      E +YIA    ++I +  T +G    F+G+G   ++ +G  + N + A   
Sbjct: 167 PMDVSLSASGE-LYIADMYNYRIRKVLT-NGTIVTFAGNGQSGHIGDGGLATNAAMALAY 224

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGGSRLL-AGGDPIFPDNLFKFGDRDGMGSEVL 835
           G+ +  +  E+Y++DS +  +R +++    + +  +G  P   DN+        + +   
Sbjct: 225 GVKVFSN-GEVYISDSFNFKVRKVDVNGNITTVAGSGAGPFNGDNV--------LATAAN 275

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG-AALAAQLSEP 894
           L HP  V     G++ +AD+ N++I+ + P    ++T AG G A F DG  A    LS P
Sbjct: 276 LNHPTDVLRLDTGELIIADTDNYRIRLVMPNGTIITT-AGNGTASFSDGEIAEENGLSLP 334

Query: 895 AGIIEAQNGNLFIADTNNNIIRYL 918
            G++  QNG L IAD  N  IR L
Sbjct: 335 TGLLMIQNG-LLIADAGNKRIRLL 357



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 153/343 (44%), Gaps = 55/343 (16%)

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEG-LRDGSFDDATFNRPQGLAYNAK---KN 669
            L+I+D  + RI     +G  IV    +G+ G + DG    AT N    LAY  K     
Sbjct: 177 ELYIADMYNYRIRKVLTNGT-IVTFAGNGQSGHIGDGGL--AT-NAAMALAYGVKVFSNG 232

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK-GTSQLLNSPWDVCYKPINE 728
            +Y++D+ N  +R++D VN  + T+AG+G     + G     T+  LN P DV      E
Sbjct: 233 EVYISDSFNFKVRKVD-VNGNITTVAGSG--AGPFNGDNVLATAANLNHPTDVLRLDTGE 289

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEI- 787
            + IA    ++I      +G     +G+G     +G        A+ +G+SL    + I 
Sbjct: 290 LI-IADTDNYRI-RLVMPNGTIITTAGNGTASFSDGE------IAEENGLSLPTGLLMIQ 341

Query: 788 ---YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL--------- 835
               +AD+ +  IR L      SR+ +     + D+    G    +G+ +          
Sbjct: 342 NGLLIADAGNKRIRLLQ-----SRIYSCYGKSYLDSSVCSGQGQCVGNNMCQCNAGFEGP 396

Query: 836 ---------------LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
                          L+ P  +    NG + V+D+ +H IKK+  ++  V+ +AG G AG
Sbjct: 397 TCLPSSYYITTVARGLKDPQKISKLSNGDLIVSDTGDHSIKKISYSTGVVTRIAGTGVAG 456

Query: 881 FKDGAALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           F     LA  AQ ++P GI    N  ++IAD+ N+ IR++D+N
Sbjct: 457 FSGDGGLATLAQFNKPYGIAVTINDEIYIADSLNHRIRFIDVN 499



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 14/173 (8%)

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
           ++N    +P GI++S +  EIY ADS +  IR +++    + ++  G   F       GD
Sbjct: 103 AINAQVNKPYGIAVSSN-DEIYFADSMNHRIRKIDITGNITTVVGTGANTFS------GD 155

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDG 884
             G+ ++  +  P+ V  + +G++Y+AD YN++I+K+   +  + T AG G++G     G
Sbjct: 156 -GGLATDCTMNTPMDVSLSASGELYIADMYNYRIRKV-LTNGTIVTFAGNGQSGHIGDGG 213

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQP 937
            A  A ++   G+    NG ++I+D+ N  +R +D+N     + T+   G  P
Sbjct: 214 LATNAAMALAYGVKVFSNGEVYISDSFNFKVRKVDVNG---NITTVAGSGAGP 263



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 62/366 (16%)

Query: 590 DNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDG 649
           DN P +  + +  P  +A+   N+ ++ +DS ++RI   D+ GN    +G+       DG
Sbjct: 99  DNGPAI-NAQVNKPYGIAVS-SNDEIYFADSMNHRIRKIDITGNITTVVGTGANTFSGDG 156

Query: 650 SF-DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
               D T N P  ++ +A   L Y+AD  N+ +R++   N T+ T AGNG  G    GG 
Sbjct: 157 GLATDCTMNTPMDVSLSASGEL-YIADMYNYRIRKV-LTNGTIVTFAGNGQSGHIGDGGL 214

Query: 709 KGTSQLLNSPWDVCYKP---INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS 765
                  N+   + Y      N +VYI+ +   ++ +   V+G     +G G     NG 
Sbjct: 215 A-----TNAAMALAYGVKVFSNGEVYISDSFNFKVRKVD-VNGNITTVAGSGAGP-FNGD 267

Query: 766 SSLNTS--FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLF 822
           + L T+     P+ + L  D  E+ +AD+++  IR L +  G     AG G   F D   
Sbjct: 268 NVLATAANLNHPTDV-LRLDTGELIIADTDNYRIR-LVMPNGTIITTAGNGTASFSDG-- 323

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV-----------S 871
           +  + +G      L  P G+   +NG + +AD+ N +I+ L    +R+           S
Sbjct: 324 EIAEENG------LSLPTGLLMIQNG-LLIADAGNKRIRLLQ---SRIYSCYGKSYLDSS 373

Query: 872 TLAGIGK----------AGFKDGAAL---------AAQLSEPAGIIEAQNGNLFIADTNN 912
             +G G+          AGF+    L         A  L +P  I +  NG+L ++DT +
Sbjct: 374 VCSGQGQCVGNNMCQCNAGFEGPTCLPSSYYITTVARGLKDPQKISKLSNGDLIVSDTGD 433

Query: 913 NIIRYL 918
           + I+ +
Sbjct: 434 HSIKKI 439



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 3/77 (3%)

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNG 903
            NG I V D+  H IKK++  +  ++T+AG G AGF   +G A+ AQ+++P GI  + N 
Sbjct: 62  SNGDILVTDALGHAIKKIN-GTGVITTIAGTGVAGFAGDNGPAINAQVNKPYGIAVSSND 120

Query: 904 NLFIADTNNNIIRYLDL 920
            ++ AD+ N+ IR +D+
Sbjct: 121 EIYFADSMNHRIRKIDI 137


>gi|78357566|ref|YP_389015.1| HAD-superfamily hydrolase [Desulfovibrio alaskensis G20]
 gi|78219971|gb|ABB39320.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Desulfovibrio
           alaskensis G20]
          Length = 219

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 10/190 (5%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV+FDMDGVL +SE    +   ++ AE+G ++T  + L F+G         + +  G+  
Sbjct: 4   AVIFDMDGVLLDSEPMHMQVQDNMAAELGFKMTRAEHLAFVGISPLATWEQLCARHGLPQ 63

Query: 141 FDSEAAK---KRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
              E A+   +R+    L+K A P +G+     L L++  +++   +AVASS  R  VDA
Sbjct: 64  NPQELAEEQGRRYLAQALEK-AVPRAGL-----LPLLDYLQARDKPLAVASSNQRETVDA 117

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            L   G+    F A+V+    E  KP PDIFL A+++L    ++C+VIEDA  GV AA++
Sbjct: 118 VLGKLGV-RDFFRAVVTGSDAERSKPWPDIFLKAARLLRALPADCLVIEDAATGVAAARS 176

Query: 258 AQMRCIAVTT 267
           A MRCI +  
Sbjct: 177 AGMRCIGLCV 186


>gi|312960924|ref|ZP_07775429.1| cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           fluorescens WH6]
 gi|311284582|gb|EFQ63158.1| cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           fluorescens WH6]
          Length = 406

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 79/140 (56%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+ P      L+GKVV++DFWTY CINC H LP ++   +KY+     V
Sbjct: 260 MPSLSGAVEWLNS-PALTSESLRGKVVLVDFWTYDCINCQHTLPYVKDWAQKYEKDGLVV 318

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ ++ +++ V + GI++PV  D +  +WR      WP   ++   G++ 
Sbjct: 319 IGVHTPEYGFERIIDNVKDEVKKLGITYPVAIDNNYAIWRNFDNQYWPAHYLIDAKGQVR 378

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 379 FTHFGEGRYETQEKMIQQLL 398


>gi|453363585|dbj|GAC80710.1| hypothetical protein GM1_020_00740 [Gordonia malaquae NBRC 108250]
          Length = 567

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 7/172 (4%)

Query: 431 PEFPAKLDWLNTA---PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPF 487
           P F     W NTA   PL    DL+G+VV++DFWTY CINC+   P +      Y+    
Sbjct: 274 PGFDGGGRWFNTADGRPLT-ASDLRGRVVLVDFWTYSCINCLRDGPHVRQWYDAYRSAGL 332

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            VVGVH+ +F  EKD   + +A+    I +PVV D D  +W+  G   WP   ++   G+
Sbjct: 333 VVVGVHTPEFAFEKDSGNVASAIGAERIDYPVVQDNDYAIWQAFGNRYWPAKYLIDATGR 392

Query: 548 LLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSP 599
           + A   GEG  +++++ +   L       +L   P P++    + P    SP
Sbjct: 393 IRAANFGEGRYREVENGIRDLLRAASPGAVL---PAPVNTADTSTPSSAVSP 441


>gi|261339831|ref|ZP_05967689.1| cytochrome c biogenesis protein, transmembrane region [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318115|gb|EFC57053.1| cytochrome c biogenesis protein, transmembrane region [Enterobacter
           cancerogenus ATCC 35316]
          Length = 396

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 1/152 (0%)

Query: 418 ISDVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF 477
           +  V    TT  +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +  
Sbjct: 241 LQPVVQTTTTSQLPSLDGGTGWVNGDPVT-SESLRGKVVLIDFWTWDCINCQHTLPHVRD 299

Query: 478 LEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP 537
              KY+     V+GVH+ ++  EK L +++NAV ++ + + VV D +  +W   G   WP
Sbjct: 300 WANKYQSQGLVVIGVHTPEYPWEKPLSSVKNAVNKWQLPYRVVADNNYKIWTAFGNQYWP 359

Query: 538 TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
                   G+L     GEG  +  + +++  L
Sbjct: 360 AHYYFDTKGQLRYTAFGEGDYEKQEQVIQQLL 391


>gi|418754100|ref|ZP_13310334.1| hypothetical protein LEP1GSC179_2637 [Leptospira santarosai str.
           MOR084]
 gi|409965522|gb|EKO33385.1| hypothetical protein LEP1GSC179_2637 [Leptospira santarosai str.
           MOR084]
          Length = 356

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 30/274 (10%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ +V+D   + +R+ID         +GN T  S     
Sbjct: 68  DGTTQTASFKTPFGLEVDTFGNI-FVSDQMANLIRKID--------RSGNVTTLS----- 113

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              TS LL  P  + + PI    Y++     QI++   +D  +  A +  G +   NG  
Sbjct: 114 ---TSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPLDQFSLYAGNSSGVDGFQNGDR 170

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+SF  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 171 -LNSSFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGSVSTLSGG---------TLGY 219

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  +H+I+K+D  +  VST  G G     DG 
Sbjct: 220 LDGDLTSAQFKSPLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGIGADIDGN 279

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            L A L+ PA I    NG +F++DTN+N +R +D
Sbjct: 280 GLNASLNGPAFISLDNNGYMFVSDTNSNKVRIID 313



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 602 FPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           F G   +D+   R L++ +  ++ I   +L+   +  + S G  G  DG    A F  P 
Sbjct: 175 FKGPFFMDLDRERNLYVGELGNHAIRKINLNSGSVSTL-SGGTLGYLDGDLTSAQFKSPL 233

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           G+ Y+ K + L VAD ++H +R+ID  N TV T  GNG  G+D  G   G +  LN P
Sbjct: 234 GITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI-GADIDG--NGLNASLNGP 288



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 32/279 (11%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +F+SD   N I   D  GN +  + +S               
Sbjct: 73  TASFKTPFGLEVDTFGN-IFVSDQMANLIRKIDRSGN-VTTLSTS------------LLL 118

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  ++  + +ID + D     AGN +    +Q G++  S    
Sbjct: 119 EDPSGIKFDPITGDKYVSCKDSAQIFKIDPL-DQFSLYAGNSSGVDGFQNGDRLNSSF-K 176

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F  
Sbjct: 177 GPF---FMDLDRERNLYVGELGNHAIRKINLNSGSVSTLSG-GTLGYLDGDLT-SAQFKS 231

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P GI+       + VAD +   IR ++LK        G             D DG G   
Sbjct: 232 PLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI--------GADIDGNGLNA 283

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            L  P  +    NG ++V+D+ ++K++ +DP  N VST+
Sbjct: 284 SLNGPAFISLDNNGYMFVSDTNSNKVRIIDPDLN-VSTI 321



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ +   F  I+V+D  ++ IR ++       
Sbjct: 54  VVSLFAGTGIKESIDGTTQ-TASFKTPFGLEVDT-FGNIFVSDQMANLIRKID------- 104

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         + G+   + + +LL+ P G+ +    G  YV+   + +I K+DP  
Sbjct: 105 --------------RSGNVTTLSTSLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPL- 149

Query: 868 NRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ +  N+ IR ++LN
Sbjct: 150 DQFSLYAGNSSGVDGFQNGDRLNSSFKGPFFMDLDRERNLYVGELGNHAIRKINLN 205


>gi|302036371|ref|YP_003796693.1| hypothetical protein NIDE1006 [Candidatus Nitrospira defluvii]
 gi|300604435|emb|CBK40767.1| conserved protein of unknown function, contains NHL repeats
           [Candidatus Nitrospira defluvii]
          Length = 404

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 69/338 (20%)

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG---NGTKG---------- 701
           + N P+GL  + K NL Y+AD+ENH +R +D     + T+AG   +GT G          
Sbjct: 33  SLNEPKGLCVDRKGNL-YIADSENHVVRRVDRATGIITTVAGVCPSGTTGPAVPEPPAAE 91

Query: 702 ---------SDYQG------------------------------GEKGTSQL--LNSPWD 720
                    +D+ G                              G+ G ++   LN P  
Sbjct: 92  ETNDDEDPFADHSGDSTKAYTQVTDLSGTVRYVTGGRLTVEHDSGDGGPARRARLNFPSA 151

Query: 721 VCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNTSFAQPSGIS 779
           V        +YIA    H++ +     G+    +G G  R + +G  +++ +  +P+G++
Sbjct: 152 VAVDRAG-NLYIADTMNHRVRKVDGATGIITNVAGTGQARYSGDGGPAVSAAINEPTGLA 210

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +S + +  Y+AD  ++ +R ++L TG    +AG      D    +        +  L  P
Sbjct: 211 VSDEAL--YIADQSNNRVRRVDLATGVITTVAG------DGTAAYSGDQVSAVQASLAGP 262

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAA--LAAQLSEPAGI 897
            GV    +G +YVAD++N +I+ +DPA+ +++T+AG G      G A   +  LS PAGI
Sbjct: 263 SGVALGGDGVVYVADTFNSRIRSVDPATGQITTIAGDGGTYRYQGPAEPSSPSLSRPAGI 322

Query: 898 IEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
               +GN+++ D+++++IR    N +   +  L   GV
Sbjct: 323 SVGSDGNVYMTDSDSHLIRV--WNGQTKTISRLSGTGV 358



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 16/271 (5%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTS 712
           A  N P  +A +   NL Y+ADT NH +R++D     +  +AG G   + Y G G    S
Sbjct: 144 ARLNFPSAVAVDRAGNL-YIADTMNHRVRKVDGATGIITNVAGTGQ--ARYSGDGGPAVS 200

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNTS 771
             +N P  +     +E +YIA    +++       GV    +GDG    + +  S++  S
Sbjct: 201 AAINEPTGLAVS--DEALYIADQSNNRVRRVDLATGVITTVAGDGTAAYSGDQVSAVQAS 258

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
            A PSG++L  D + +YVAD+ +S IR+++  TG    +AG         +++       
Sbjct: 259 LAGPSGVALGGDGV-VYVADTFNSRIRSVDPATGQITTIAG-----DGGTYRY-QGPAEP 311

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA-- 889
           S   L  P G+    +G +Y+ DS +H I+  +  +  +S L+G G A F      A   
Sbjct: 312 SSPSLSRPAGISVGSDGNVYMTDSDSHLIRVWNGQTKTISRLSGTGVAQFGGDGGDALAG 371

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
            LS P G+    +G +++ADT N+ IR L +
Sbjct: 372 SLSYPFGVAVDASGTVYVADTFNHRIRVLTV 402



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 23/237 (9%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDG 748
           + TLAGNG  G    GG  G +  LN P  +C   ++ K  +YIA +  H +       G
Sbjct: 11  IETLAGNGEPGYAGDGGPAGAAS-LNEPKGLC---VDRKGNLYIADSENHVVRRVDRATG 66

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT---G 805
           +    +G      +  S +   +  +P     + D  + + AD    S +A    T   G
Sbjct: 67  IITTVAG------VCPSGTTGPAVPEPPAAEETNDDEDPF-ADHSGDSTKAYTQVTDLSG 119

Query: 806 GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
             R + GG      +    GD  G      L  P  V   + G +Y+AD+ NH+++K+D 
Sbjct: 120 TVRYVTGGRLTVEHD---SGD-GGPARRARLNFPSAVAVDRAGNLYIADTMNHRVRKVDG 175

Query: 866 ASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           A+  ++ +AG G+A +    G A++A ++EP G+  +    L+IAD +NN +R +DL
Sbjct: 176 ATGIITNVAGTGQARYSGDGGPAVSAAINEPTGLAVSDEA-LYIADQSNNRVRRVDL 231



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 13/212 (6%)

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD--D 653
            ++ +  P  LA+   +  L+I+D ++NR+   DL    I  +   G             
Sbjct: 199 VSAAINEPTGLAVS--DEALYIADQSNNRVRRVDLATGVITTVAGDGTAAYSGDQVSAVQ 256

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A+   P G+A      ++YVADT N  +R +D     + T+AG+G     YQG  + +S 
Sbjct: 257 ASLAGPSGVALGG-DGVVYVADTFNSRIRSVDPATGQITTIAGDGGT-YRYQGPAEPSSP 314

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQH--QIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNT 770
            L+ P  +     +  VY+  +  H  ++W   T   ++R  SG G  +   +G  +L  
Sbjct: 315 SLSRPAGISVGS-DGNVYMTDSDSHLIRVWNGQTKT-ISR-LSGTGVAQFGGDGGDALAG 371

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
           S + P G+++      +YVAD+ +  IR L +
Sbjct: 372 SLSYPFGVAVDASGT-VYVADTFNHRIRVLTV 402


>gi|322435234|ref|YP_004217446.1| hypothetical protein AciX9_1613 [Granulicella tundricola MP5ACTX9]
 gi|321162961|gb|ADW68666.1| NHL repeat containing protein [Granulicella tundricola MP5ACTX9]
          Length = 781

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 33/336 (9%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF-DDAT 655
           T P+  P  L  D   N L+++++  + I+     G   +  G+  +    DG+    A 
Sbjct: 19  TVPILLPSGLVYDAQGN-LYLAETAAHLILRVSPSGALTIVAGTGTQGYAGDGTLPTQAL 77

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
            + P  LA     +L Y+ADT NHA+R ID     + T+AG GT G    G     +Q L
Sbjct: 78  LDSPTALAITPTGDL-YLADTHNHAIRRIDAATQIITTVAGTGTPGRSPDGTLATKAQ-L 135

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQI-----WEH--STVDGV-TRAFSGDGYERNLNGSSS 767
           ++P  +     ++ +YIA    H I       H  +T+ G  T+ FSGD          +
Sbjct: 136 DTPTAIALDS-SQNLYIADTRNHIIRRVDATTHLITTLAGTGTQGFSGD-------AGPA 187

Query: 768 LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFP-DNLFKFG 825
           L      P+G++L      +Y+AD+ +  IR ++  T     +AG G P F  DN+    
Sbjct: 188 LAAQIDTPTGLALDAS-NNLYLADTHNHRIRRIDAVTHIITTIAGNGTPAFTSDNI---- 242

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
                 +   L  P G+    +G + +ADS NH+I+++D  +  ++TLAG G   +   +
Sbjct: 243 ----AATSATLYLPRGITLDPSGNLLIADSANHRIRRIDAVTGLITTLAGDGTQTYAGDS 298

Query: 886 --ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
             A  A L  P  I  +      + DT N  IR +D
Sbjct: 299 TPATTASLDTPRAIALSPATLPTLTDTANQRIRQID 334


>gi|425076626|ref|ZP_18479729.1| hypothetical protein HMPREF1305_02539 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW1]
 gi|425087259|ref|ZP_18490352.1| hypothetical protein HMPREF1307_02708 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW3]
 gi|405592335|gb|EKB65787.1| hypothetical protein HMPREF1305_02539 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW1]
 gi|405603983|gb|EKB77104.1| hypothetical protein HMPREF1307_02708 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW3]
          Length = 396

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L  +
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPQ 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|225575420|ref|ZP_03784030.1| hypothetical protein RUMHYD_03510 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037365|gb|EEG47611.1| beta-phosphoglucomutase [Blautia hydrogenotrophica DSM 10507]
          Length = 214

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 6/190 (3%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FD+DGV+ N+ +        +  E+G +  +       G      L  V  V G+
Sbjct: 1   MRAVIFDLDGVVVNTAKYHYLGWKKLAKELGFDFDISHNERLKGVSRMESLNIVLEVGGI 60

Query: 139 KGFDSEAAKK---RFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
            G+  E  +K   R    YL+     +     PG  E + + K+KG + A+ S++   ++
Sbjct: 61  TGYSEEEKQKLADRKNRYYLEMIESIDGSEILPGIPEFLEKLKNKGYQTALGSASKSGRM 120

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
              L   GL  S FD IV  +  E  KP P++F+ A+++L VP  ECIV+EDA AGVQAA
Sbjct: 121 --ILEKLGLD-SKFDVIVDGNLVERPKPDPEVFVKAAQLLGVPCEECIVVEDAQAGVQAA 177

Query: 256 KAAQMRCIAV 265
            A  M+CI +
Sbjct: 178 HAGGMKCIGI 187


>gi|386722458|ref|YP_006188784.1| copper amine oxidase domain-containing protein [Paenibacillus
           mucilaginosus K02]
 gi|384089583|gb|AFH61019.1| copper amine oxidase domain-containing protein [Paenibacillus
           mucilaginosus K02]
          Length = 537

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 34/294 (11%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
           GL DG+ + + F  P GL+     +L YVAD  NHA+R ID     V T+AG+G  G   
Sbjct: 116 GLLDGAANASLFQEPLGLSAGPDGSL-YVADAGNHAIRRID-AKGNVTTVAGSGRLGVKD 173

Query: 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR------------- 751
               KG +     P DV   P +  +Y+A    H I   S    VT              
Sbjct: 174 G---KGAAAEFYRPGDVAAAP-DGTLYVADTLGHTIRRISPQGEVTTLTAPSKRVVEATP 229

Query: 752 ---AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
              A +GD  +  L         F +P+GI+L      +YV+DS +  +R ++L  G   
Sbjct: 230 GQVAAAGDFADGPLA-----QAKFNEPTGIALDAK-GNLYVSDSGNQRVRYIDLAKGTVT 283

Query: 809 LLAGGDPI--FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
            +AGG       D     G  +G   +  L +P+G+   + G + +ADS NH ++ L   
Sbjct: 284 TVAGGGTAAELKDMYVPGGFSNGAALQARLNYPMGIAVTEEGGLLIADSQNHAVRYL--F 341

Query: 867 SNRVSTLAGIG--KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
             +++TLAG G  K G  DG    A L+ PA +    +G++ +AD+ NN +R L
Sbjct: 342 GGQLTTLAGAGEQKTGLLDGMEGKAGLNRPADVAVLGDGSVLVADSFNNRLRRL 395



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 21/189 (11%)

Query: 740 IWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRA 799
           + E +T  G  R  S +G        + L  SF  P+G+++ PD     V+DS +  IR 
Sbjct: 41  MTELTTAAGTGRLGSANG--------TGLEASFRVPAGLAVLPDGTAA-VSDSRNGVIRK 91

Query: 800 LNLKTGGS-RLLAGGDPIF---PDNLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
           L   TGG   +LAG   +F    D  +  G   DG  +  L Q PLG+    +G +YVAD
Sbjct: 92  L---TGGRVDVLAG---VFYRKDDKGYPVGGLLDGAANASLFQEPLGLSAGPDGSLYVAD 145

Query: 855 SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
           + NH I+++D   N V+T+AG G+ G KDG   AA+   P  +  A +G L++ADT  + 
Sbjct: 146 AGNHAIRRIDAKGN-VTTVAGSGRLGVKDGKGAAAEFYRPGDVAAAPDGTLYVADTLGHT 204

Query: 915 IRYLDLNKE 923
           IR +    E
Sbjct: 205 IRRISPQGE 213



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 22/163 (13%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F +P G+S  PD   +YVAD+ + +IR ++ K G    +AG          + G +DG G
Sbjct: 127 FQEPLGLSAGPD-GSLYVADAGNHAIRRIDAK-GNVTTVAGSG--------RLGVKDGKG 176

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA---------SNRV--STLAGIGKAG 880
           +      P  V  A +G +YVAD+  H I+++ P          S RV  +T   +  AG
Sbjct: 177 AAAEFYRPGDVAAAPDGTLYVADTLGHTIRRISPQGEVTTLTAPSKRVVEATPGQVAAAG 236

Query: 881 -FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
            F DG    A+ +EP GI     GNL+++D+ N  +RY+DL K
Sbjct: 237 DFADGPLAQAKFNEPTGIALDAKGNLYVSDSGNQRVRYIDLAK 279


>gi|365970492|ref|YP_004952053.1| dipZ [Enterobacter cloacae EcWSU1]
 gi|365749405|gb|AEW73632.1| DipZ [Enterobacter cloacae EcWSU1]
          Length = 396

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +     +Y+     V
Sbjct: 253 LPSLSGGTGWINGDPVT-SESLRGKVVLIDFWTWDCINCQHTLPHVRGWATRYQSQGLVV 311

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L +++NAV ++ + + VV D +  +W   G   WP        G+L 
Sbjct: 312 IGVHTPEYPWEKPLSSVKNAVNKWQLPYRVVTDNNYQIWNAFGNQYWPAHYYFDAKGQLR 371

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+ ++ + +++  L
Sbjct: 372 YTSFGEGNYEEQEKVIQQLL 391


>gi|289578963|ref|YP_003477590.1| HAD-superfamily hydrolase [Thermoanaerobacter italicus Ab9]
 gi|289528676|gb|ADD03028.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter italicus Ab9]
          Length = 226

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 99/193 (51%), Gaps = 16/193 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ +SE    +   ++F  +GVE++ ++ L F+GT        +      
Sbjct: 2   IKAVIFDMDGVIIDSEPIHIKLEEELFKSLGVEISEDEHLTFVGTSSYYMWRKIK----- 56

Query: 139 KGFDSEAAKKRFFEI----YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSA--DR 192
           + F+   + +   EI    YL+   K    I   G  E + +   K  K+AVASS+  D 
Sbjct: 57  ERFNLSQSVEELVEIDRKRYLEHVLKTGEIIPIEGITETVKKLFEKEYKLAVASSSPIDV 116

Query: 193 IKVDANLAAAGLPVS-MFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           I+    L    L ++  FD +VS D  EN KPAPDIFL  +  L V   EC+VIED+  G
Sbjct: 117 IE----LVVRKLEINKCFDVLVSGDYVENSKPAPDIFLYTAAKLKVKPHECVVIEDSYNG 172

Query: 252 VQAAKAAQMRCIA 264
           V  AK A M+ I 
Sbjct: 173 VHGAKKAGMKVIG 185


>gi|223937279|ref|ZP_03629185.1| NHL repeat containing protein [bacterium Ellin514]
 gi|223894064|gb|EEF60519.1| NHL repeat containing protein [bacterium Ellin514]
          Length = 429

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 131/278 (47%), Gaps = 23/278 (8%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGSD 703
           G +DG    A F  P  +A ++  N+ YVADTEN  +R+I   N +V T AG  GT GS 
Sbjct: 40  GSKDGLSSSARFRHPNSIAADSAGNI-YVADTENSTIRKIT-PNGSVSTFAGFAGTFGS- 96

Query: 704 YQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN 763
                 GT+ L  +P  +        +Y+A      I    T  GV    +G     N  
Sbjct: 97  --ADGVGTNALFYAPQGIAVDSAGF-IYVADTANATI-RKITPAGVVSTLAGSAGNINSF 152

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG--GDPIFPDNL 821
             + +N +F QP  +++  +   +YVAD+ + +IR +    G    LAG  G+P      
Sbjct: 153 DGTGINANFYQPRSLAVD-NGGNVYVADTWNHTIRKI-TPAGLVSTLAGLAGNP------ 204

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAG 880
              G  DG  S+     P G+       ++V D +NH I+K+ P    V+T+AG+ G  G
Sbjct: 205 ---GSADGTNSKARFNRPSGIAVDNATNLFVTDFHNHTIRKITPGG-TVTTIAGLPGVWG 260

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
             DG    A+  +P GI+    GNLF+AD+ N  IR +
Sbjct: 261 NADGTNNVARFFQPQGIVADNAGNLFVADSGNQTIRKI 298



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 21/321 (6%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
            + P  +A D   N ++++D+ ++ I     +G+     G +G  G  DG   +A F  P
Sbjct: 51  FRHPNSIAADSAGN-IYVADTENSTIRKITPNGSVSTFAGFAGTFGSADGVGTNALFYAP 109

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           QG+A ++    +YVADT N  +R+I      V TLAG+    + + G   G +     P 
Sbjct: 110 QGIAVDSAG-FIYVADTANATIRKITPA-GVVSTLAGSAGNINSFDG--TGINANFYQPR 165

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGI 778
            +        VY+A    H I    T  G+    +G  G   + +G++S    F +PSGI
Sbjct: 166 SLAVDN-GGNVYVADTWNHTI-RKITPAGLVSTLAGLAGNPGSADGTNS-KARFNRPSGI 222

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
           ++  +   ++V D  + +IR   +  GG+     G P        +G+ DG  +      
Sbjct: 223 AVD-NATNLFVTDFHNHTIR--KITPGGTVTTIAGLPGV------WGNADGTNNVARFFQ 273

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAGI-GKAGFKDGAALAAQLSEPA 895
           P G+     G ++VADS N  I+K+ P+     VST+AG+ G AG  +G    A+   PA
Sbjct: 274 PQGIVADNAGNLFVADSGNQTIRKISPSGTNWIVSTVAGLSGIAGNANGTNNTARFYFPA 333

Query: 896 GIIEAQNGNLFIADTNNNIIR 916
            + +   G +++AD  NN IR
Sbjct: 334 DVAQDIAGYIYVADLGNNAIR 354


>gi|333895983|ref|YP_004469857.1| HAD-superfamily hydrolase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|333111248|gb|AEF16185.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 218

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 15/190 (7%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           AV+FDMDGVL +SE    +   D+F E+G  ++ E+ + F+GT  ++++      K    
Sbjct: 4   AVIFDMDGVLIDSETLHIQLEEDIFKEIGANISFEEHISFVGTT-SHYMWEYVKNKCNVP 62

Query: 141 FDSEAA----KKRFFEIYLDKY---AKPNSGIGFPGALELINQCKSKGLKVAVASSADRI 193
           F  E      +KR+F+ Y+ K+    KP  G+      EL+ +   + +++AVASS+   
Sbjct: 63  FTVEELVEMDRKRYFD-YISKHDDAVKPIVGVD-----ELVKELHKRNMRLAVASSSPID 116

Query: 194 KVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
            ++  +    L  + FD +VS D  +  KP PDIFL A++ LNV    CIVIED+  GV 
Sbjct: 117 VIEIVVKRLKLE-NYFDELVSGDFVKRSKPYPDIFLYAAEKLNVAPERCIVIEDSNKGVL 175

Query: 254 AAKAAQMRCI 263
           AAK+A M+ +
Sbjct: 176 AAKSAGMKVV 185


>gi|103485572|ref|YP_615133.1| thioredoxin-like protein [Sphingopyxis alaskensis RB2256]
 gi|98975649|gb|ABF51800.1| Thioredoxin-like protein [Sphingopyxis alaskensis RB2256]
          Length = 381

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           WLNT   +  + L+GKVV+++FWTY CIN +  LP +     KYKD    V+GVH+ +F 
Sbjct: 75  WLNTTE-RTPQALRGKVVLVNFWTYSCINSLRPLPYIRDWAAKYKDDGLIVIGVHTPEFA 133

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            EKD + +R AV   G++ PV  D D   WR  G + WP F  +   G++     GEG  
Sbjct: 134 FEKDGDKVRRAVAELGVTWPVKLDSDYATWRLFGNDGWPGFYFIDAKGQVRHHRLGEGDY 193

Query: 559 KDLDDLVEAAL 569
              + L++  L
Sbjct: 194 AASERLLQQLL 204


>gi|317497825|ref|ZP_07956136.1| haloacid dehalogenase-like hydrolase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894897|gb|EFV17068.1| haloacid dehalogenase-like hydrolase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 217

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 16/193 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           ++AV+FDMDGV+ +SE  + +A   +    G+EV       F+GT        +   K  
Sbjct: 2   ITAVIFDMDGVIADSEYFNVKAKHLILKRAGIEVDWHYHDKFLGTTHEYMWTEMK--KEF 59

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGI-------GFPGALELINQCKSKGLKVAVASSAD 191
           +  D E         Y+D++ K    +         PG ++LI   K KG  +AVASS+ 
Sbjct: 60  ESLDKEVL------YYIDQWVKTRKELIDQEGLKPMPGVVDLIRTLKEKGFHLAVASSSL 113

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           +  +  N+   G+    F+A +S    EN KP P+IF  A++ +    + CIV+ED+ AG
Sbjct: 114 KEDIMTNMNTFGI-TDCFEAFISGSECENGKPDPEIFQKAAEAIGQKAANCIVVEDSEAG 172

Query: 252 VQAAKAAQMRCIA 264
           V+AAK+A+M+CI 
Sbjct: 173 VKAAKSAKMKCIG 185


>gi|118576178|ref|YP_875921.1| thiol-disulfide isomerase [Cenarchaeum symbiosum A]
 gi|118194699|gb|ABK77617.1| thiol-disulfide isomerase [Cenarchaeum symbiosum A]
          Length = 370

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 74/139 (53%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P+     D++NT+P +   +++G VV+ D WTY CINC+  LP +   +++Y D    ++
Sbjct: 58  PQLVGIADYINTSPEELDAEIEGSVVLYDIWTYSCINCIRTLPHITAWDERYADDGLLII 117

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           G+HS +F+ EKDL  +  AV   GI +PVV D D   W+      WP   +    G +  
Sbjct: 118 GIHSPEFEFEKDLNNVIMAVENNGIEYPVVLDNDKETWKAFENRYWPRKFIADHEGFIRY 177

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG   + + +++  L
Sbjct: 178 DHIGEGAYDETERVIQRLL 196


>gi|186686147|ref|YP_001869343.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
           allergen [Nostoc punctiforme PCC 73102]
 gi|186468599|gb|ACC84400.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Nostoc punctiforme PCC 73102]
          Length = 201

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 31/221 (14%)

Query: 352 RREILRYGSLGVAFSCLFFAVSNWKAMQYASPKAIWNVLFGVNRPSFEQTEGGSSQSERI 411
           RR++L Y  LGV         SN++                VN PS    +  ++Q    
Sbjct: 8   RRQLLFYLGLGVVGIGAATTFSNFRK---------------VNAPSISPAKSNNTQ---- 48

Query: 412 QQFVNYISDVENRKTTPI---VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINC 468
                   D+E    TP    +PEF     WLN++PL    DLKG V+++ FWT+ CINC
Sbjct: 49  --------DLETTVKTPAGKSLPEFQGISQWLNSSPLAIA-DLKGSVILIQFWTFACINC 99

Query: 469 MHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528
              LP +    ++Y+     V+G+H+ +F  E+D   I+ A+ ++ I++PV  D +   W
Sbjct: 100 QRTLPYITKWHQQYESQGLKVIGIHTPEFAFERDPNNIKKALQQHKITYPVPVDNEYKTW 159

Query: 529 RELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
                  WP   +    G L     GEG  + ++  +   L
Sbjct: 160 NAYENQYWPHIFLADRQGLLQYDHIGEGAYEKIEQTIRQLL 200


>gi|423095846|ref|ZP_17083642.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas fluorescens Q2-87]
 gi|397884782|gb|EJL01265.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas fluorescens Q2-87]
          Length = 403

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 409 ERIQQFVNYISDVENRKTTPIV------PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT 462
           E++   ++Y+       + P +      P     + WLN+  L     L+GKVV++DFWT
Sbjct: 231 EKVPMAIDYVVSKAGAASMPTLEAQGAMPSLDGAVQWLNSPALS-SESLRGKVVLVDFWT 289

Query: 463 YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522
           Y CINC H LP +    KKY+     V+GVH+ ++  EK ++ +R  V +  I +PV  D
Sbjct: 290 YDCINCQHTLPYVNDWAKKYEKDGLVVIGVHTPEYGYEKIIDNVREQVRKLDIRYPVAID 349

Query: 523 GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
               +WR      WP    +   G++     GEG   + + +++  L
Sbjct: 350 NQYAIWRSFNNQYWPAHYFIDAKGQVRYSHFGEGRYGEQEQVIQQLL 396


>gi|194364246|ref|YP_002026856.1| cytochrome c biogenesis protein transmembrane region
           [Stenotrophomonas maltophilia R551-3]
 gi|194347050|gb|ACF50173.1| cytochrome c biogenesis protein transmembrane region
           [Stenotrophomonas maltophilia R551-3]
          Length = 589

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 1/148 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL   + L+GKVV++DFWTY CINC+  +P +   E++Y+D    V
Sbjct: 271 LPALDGATGWLNSPPLS-AQQLRGKVVLVDFWTYSCINCLRAMPFVHEWERRYRDHGLVV 329

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E++   +  AV    + +PV  D    +WR      WP    V   G + 
Sbjct: 330 IGVHTPEFAFERNPSNVMKAVQELKVEYPVALDNQYTIWRAFNNRYWPAQYFVDAQGNIR 389

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKKKL 577
               GEG+    + ++   L   G+  L
Sbjct: 390 GHQFGEGNYARSEQVIRRLLTEAGQTNL 417


>gi|383450758|ref|YP_005357479.1| phosphatase/phosphohexomutase [Flavobacterium indicum GPTSA100-9]
 gi|380502380|emb|CCG53422.1| Probable phosphatase/phosphohexomutase [Flavobacterium indicum
           GPTSA100-9]
          Length = 211

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 6/207 (2%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           +  ++FDMDGV+ ++E     A    F ++ +EV+ + +  F G    N    +  + G+
Sbjct: 2   IQTIIFDMDGVIVDTEPVHHYAYYQHFKQLNIEVSHDLYTSFTGNSTKNVYQKIKDIFGI 61

Query: 139 KG--FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
           +G   D    K+  F    D +          G  +LI Q   KG ++ +ASSA ++ ++
Sbjct: 62  EGEIHDLVQTKRNLFN---DAFDTKEDLFLLDGVEDLIQQLHLKGKQLILASSASKVTIE 118

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
                  L    F  IVS + F   KP P IF+ A ++ N    +CI+IED+  G+QAAK
Sbjct: 119 RVFNRFNLH-PYFSHIVSGEDFPQSKPNPAIFIEAVRLSNSSKEQCIIIEDSTNGIQAAK 177

Query: 257 AAQMRCIAVTTTLSEERLKEASPSLIR 283
           AA + C+   +  S+ +    +  +IR
Sbjct: 178 AAGVYCVGYKSENSKNQDYSLADQVIR 204


>gi|330010605|ref|ZP_08306833.1| cytochrome C biogenesis protein transmembrane region [Klebsiella
           sp. MS 92-3]
 gi|378978918|ref|YP_005227059.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae HS11286]
 gi|425091613|ref|ZP_18494698.1| hypothetical protein HMPREF1308_01873 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW5]
 gi|328534455|gb|EGF61048.1| cytochrome C biogenesis protein transmembrane region [Klebsiella
           sp. MS 92-3]
 gi|364518329|gb|AEW61457.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae HS11286]
 gi|405612672|gb|EKB85423.1| hypothetical protein HMPREF1308_01873 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW5]
          Length = 396

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|238894839|ref|YP_002919573.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|238547155|dbj|BAH63506.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 396

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|152970357|ref|YP_001335466.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150955206|gb|ABR77236.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 386

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 203 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 261

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 262 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 320

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 321 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 380

Query: 569 L 569
           L
Sbjct: 381 L 381


>gi|365138220|ref|ZP_09344909.1| hypothetical protein HMPREF1024_00940 [Klebsiella sp. 4_1_44FAA]
 gi|363655198|gb|EHL94056.1| hypothetical protein HMPREF1024_00940 [Klebsiella sp. 4_1_44FAA]
          Length = 386

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 203 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 261

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 262 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 320

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 321 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 380

Query: 569 L 569
           L
Sbjct: 381 L 381


>gi|386034936|ref|YP_005954849.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           KCTC 2242]
 gi|424830733|ref|ZP_18255461.1| cytochrome c biogenesis protein/redoxin [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
 gi|339762064|gb|AEJ98284.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           KCTC 2242]
 gi|414708164|emb|CCN29868.1| cytochrome c biogenesis protein/redoxin [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
          Length = 396

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|449468201|ref|XP_004151810.1| PREDICTED: protein DipZ-like [Cucumis sativus]
          Length = 283

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+   + L+GKVV++DFWT+ CINC H LP +    KKY+     V
Sbjct: 140 LPTLSGGTGWVNGDPVT-SKALRGKVVLIDFWTWDCINCQHTLPHVRDWAKKYESQGLVV 198

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L +++NAV  + + + VV D +  +W   G   WP        G+L 
Sbjct: 199 IGVHTPEYPWEKPLSSVKNAVNEWQLPYRVVTDNNYKIWSAFGNQYWPAHYYFDAKGQLR 258

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 259 YTSFGEGNYDKQEAVIQHLL 278


>gi|424933327|ref|ZP_18351699.1| Putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KpQ3]
 gi|449052535|ref|ZP_21732269.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           hvKP1]
 gi|407807514|gb|EKF78765.1| Putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KpQ3]
 gi|448875888|gb|EMB10892.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           hvKP1]
          Length = 396

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|354723571|ref|ZP_09037786.1| putative cytochrome c biogenesis protein [Enterobacter mori LMG
           25706]
          Length = 402

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN  P+     L+GKVV++DFWT+ CINC H LP +     KY+     V
Sbjct: 253 LPSLSGGTGWLNGDPVT-SESLRGKVVLIDFWTWDCINCQHTLPHVRDWANKYQSQGLVV 311

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L +++NAV ++ + + VV D    +W   G + WP        G+L 
Sbjct: 312 IGVHTPEYPWEKPLSSVKNAVNKWQLPYRVVADNQYQIWNRFGNHYWPAHYFFDAKGQLR 371

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 372 YTSFGEGNYDKQEQVIQQLL 391


>gi|419975381|ref|ZP_14490792.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH1]
 gi|419981184|ref|ZP_14496462.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH2]
 gi|419986430|ref|ZP_14501562.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH4]
 gi|419992148|ref|ZP_14507107.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH5]
 gi|419998470|ref|ZP_14513257.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH6]
 gi|420004359|ref|ZP_14518997.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH7]
 gi|420010064|ref|ZP_14524541.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH8]
 gi|420016196|ref|ZP_14530490.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH9]
 gi|420021623|ref|ZP_14535801.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH10]
 gi|420027107|ref|ZP_14541103.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH11]
 gi|420033067|ref|ZP_14546876.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH12]
 gi|420038620|ref|ZP_14552265.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH14]
 gi|420044613|ref|ZP_14558091.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH16]
 gi|420050580|ref|ZP_14563878.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH17]
 gi|420056287|ref|ZP_14569445.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH18]
 gi|420060796|ref|ZP_14573792.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH19]
 gi|420067504|ref|ZP_14580296.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH20]
 gi|420072587|ref|ZP_14585223.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH21]
 gi|420078651|ref|ZP_14591106.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH22]
 gi|420084706|ref|ZP_14596957.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH23]
 gi|397343349|gb|EJJ36497.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH1]
 gi|397343832|gb|EJJ36973.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH2]
 gi|397347998|gb|EJJ41101.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH4]
 gi|397360326|gb|EJJ53006.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH6]
 gi|397361769|gb|EJJ54427.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH5]
 gi|397366341|gb|EJJ58959.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH7]
 gi|397375264|gb|EJJ67561.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH9]
 gi|397379473|gb|EJJ71666.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH8]
 gi|397386608|gb|EJJ78681.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH10]
 gi|397393969|gb|EJJ85711.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH11]
 gi|397395959|gb|EJJ87657.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH12]
 gi|397404116|gb|EJJ95642.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH14]
 gi|397410962|gb|EJK02230.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH17]
 gi|397411423|gb|EJK02678.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH16]
 gi|397420725|gb|EJK11778.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH18]
 gi|397428078|gb|EJK18828.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH20]
 gi|397432544|gb|EJK23202.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH19]
 gi|397438874|gb|EJK29347.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH21]
 gi|397444570|gb|EJK34840.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH22]
 gi|397449962|gb|EJK40081.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           subsp. pneumoniae KPNIH23]
          Length = 396

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|429215473|ref|ZP_19206633.1| transmembrane protein [Pseudomonas sp. M1]
 gi|428153880|gb|EKX00433.1| transmembrane protein [Pseudomonas sp. M1]
          Length = 401

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+APL     L+GKVV++DFWTY CINC H LP +    K+Y D    V
Sbjct: 255 MPSLDGAVQWLNSAPLT-SEALRGKVVLVDFWTYDCINCQHTLPYVNQWAKRYADQGLVV 313

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+    +  AV R  I +PV  D    +W       WP    +   G + 
Sbjct: 314 IGVHTPEYPYERIPANVAKAVARNDIHYPVALDNQYRIWNAFANQYWPAHYFIDAKGHVR 373

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
            Q  GEG  +  + ++   L
Sbjct: 374 YQHVGEGDYQGQEAIIRQLL 393


>gi|167036979|ref|YP_001664557.1| HAD family hydrolase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039690|ref|YP_001662675.1| HAD family hydrolase [Thermoanaerobacter sp. X514]
 gi|300915061|ref|ZP_07132376.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter sp. X561]
 gi|307724984|ref|YP_003904735.1| HAD superfamily hydrolase [Thermoanaerobacter sp. X513]
 gi|320115397|ref|YP_004185556.1| HAD-superfamily hydrolase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166853930|gb|ABY92339.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter sp. X514]
 gi|166855813|gb|ABY94221.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|300888785|gb|EFK83932.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter sp. X561]
 gi|307582045|gb|ADN55444.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter sp. X513]
 gi|319928488|gb|ADV79173.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 226

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 10/190 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ +SE    +   ++F  +GVE++ ++ L F+GT        V      
Sbjct: 2   IKAVIFDMDGVIIDSEPIHIKLEEELFKSLGVEISEDEHLTFVGTSSYYMWRKVK----- 56

Query: 139 KGFDSEAAKKRFFEI----YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           + F+   + +   EI    YL+   K    I   G  E + +   K  ++AVASS+    
Sbjct: 57  EKFNLSQSVEELVEIDRKRYLEHVLKTGEIIPIEGITETVKKLFEKEYRLAVASSSPIDV 116

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           ++  +   G+  + F+ +VS D  +N KPAPDIFL A+  L V   EC+VIED+  GV  
Sbjct: 117 IELVVKKLGID-NCFEVLVSGDYVKNSKPAPDIFLYAADKLKVKPHECVVIEDSYNGVHG 175

Query: 255 AKAAQMRCIA 264
           AK A M+ I 
Sbjct: 176 AKKAGMKVIG 185


>gi|163847702|ref|YP_001635746.1| HAD family hydrolase [Chloroflexus aurantiacus J-10-fl]
 gi|222525563|ref|YP_002570034.1| HAD-superfamily hydrolase [Chloroflexus sp. Y-400-fl]
 gi|163668991|gb|ABY35357.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Chloroflexus
           aurantiacus J-10-fl]
 gi|222449442|gb|ACM53708.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Chloroflexus
           sp. Y-400-fl]
          Length = 227

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 111/201 (55%), Gaps = 13/201 (6%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A++FD DG++ ++E P+ ++  +++AE GV ++V D+   +G   A F      V  +
Sbjct: 3   IHALIFDFDGLMVDTETPALQSWQEIYAEYGVTLSVHDWAITLG-ANAGFDAHAHLVALL 61

Query: 139 KGFDSEAAKKRFF---------EIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASS 189
           +  D + A++            +   D+ + P + +  PG  EL+ +  SKGL  AVASS
Sbjct: 62  RQRDPQLAEQVIAARDTILARRQARKDELSAPQTLL--PGVAELLAEAHSKGLPCAVASS 119

Query: 190 ADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
           + R  V+  L   G+    F  +V+AD     KPAPD+FL A++ L +P + C+V+ED+ 
Sbjct: 120 SSRRWVEGWLERLGIR-PFFATVVTADDVAATKPAPDLFLEAARRLGLPPATCLVLEDSP 178

Query: 250 AGVQAAKAAQMRCIAVTTTLS 270
            G++AA+AA    +A+   +S
Sbjct: 179 NGIRAARAAGCPVVAIPGAIS 199


>gi|402780680|ref|YP_006636226.1| hypothetical protein A79E_2431 [Klebsiella pneumoniae subsp.
           pneumoniae 1084]
 gi|402541583|gb|AFQ65732.1| hypothetical protein A79E_2431 [Klebsiella pneumoniae subsp.
           pneumoniae 1084]
          Length = 396

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYMRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDACGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|456874551|gb|EMF89837.1| hypothetical protein LEP1GSC005_3835 [Leptospira santarosai str.
           ST188]
          Length = 356

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 30/274 (10%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ +V+D   + +R+ID         +GN T  S     
Sbjct: 68  DGTTQTASFKTPFGLEVDTFGNI-FVSDQMANLIRKID--------RSGNVTTLS----- 113

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              TS LL  P  + + PI    Y++     QI++   +D  +  A +  G +   NG  
Sbjct: 114 ---TSLLLEDPSGIKFDPITGDKYVSCKDGAQIFKIDPLDQFSLYAGNSSGVDGFQNGDR 170

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+SF  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 171 -LNSSFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGSVSTLSGG---------TLGY 219

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  +H+I+K+D  +  VST  G G     DG 
Sbjct: 220 LDGDLTSAQFKSPLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGIGADIDGN 279

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            L A L+ PA I    NG +F++DTN+N +R +D
Sbjct: 280 GLNASLNGPAFISLDNNGYMFVSDTNSNKVRIID 313



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 602 FPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           F G   +D+   R L++ +  ++ I   +L+   +  + S G  G  DG    A F  P 
Sbjct: 175 FKGPFFMDLDRERNLYVGELGNHAIRKINLNSGSVSTL-SGGTLGYLDGDLTSAQFKSPL 233

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           G+ Y+ K + L VAD ++H +R+ID  N TV T  GNG  G+D  G   G +  LN P
Sbjct: 234 GITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI-GADIDG--NGLNASLNGP 288



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 32/279 (11%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +F+SD   N I   D  GN +  + +S               
Sbjct: 73  TASFKTPFGLEVDTFGN-IFVSDQMANLIRKIDRSGN-VTTLSTS------------LLL 118

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  +   + +ID + D     AGN +    +Q G++  S    
Sbjct: 119 EDPSGIKFDPITGDKYVSCKDGAQIFKIDPL-DQFSLYAGNSSGVDGFQNGDRLNSSF-K 176

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F  
Sbjct: 177 GPF---FMDLDRERNLYVGELGNHAIRKINLNSGSVSTLSG-GTLGYLDGDLT-SAQFKS 231

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P GI+       + VAD +   IR ++LK        G             D DG G   
Sbjct: 232 PLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI--------GADIDGNGLNA 283

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
            L  P  +    NG ++V+D+ ++K++ +DP  N VST+
Sbjct: 284 SLNGPAFISLDNNGYMFVSDTNSNKVRIIDPDLN-VSTI 321



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ +   F  I+V+D  ++ IR ++       
Sbjct: 54  VVSLFAGTGIKESIDGTTQ-TASFKTPFGLEVDT-FGNIFVSDQMANLIRKID------- 104

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         + G+   + + +LL+ P G+ +    G  YV+     +I K+DP  
Sbjct: 105 --------------RSGNVTTLSTSLLLEDPSGIKFDPITGDKYVSCKDGAQIFKIDPL- 149

Query: 868 NRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ +  N+ IR ++LN
Sbjct: 150 DQFSLYAGNSSGVDGFQNGDRLNSSFKGPFFMDLDRERNLYVGELGNHAIRKINLN 205


>gi|227832343|ref|YP_002834050.1| hypothetical protein cauri_0515 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183797|ref|ZP_06043218.1| hypothetical protein CaurA7_07388 [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453359|gb|ACP32112.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
          Length = 526

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 73/152 (48%), Gaps = 4/152 (2%)

Query: 420 DVENRKTTPIVPEFPAKLDWLNT-APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFL 478
           D    + TP VP F     W NT AP+  R    GKV ++DFW Y CINC      L  L
Sbjct: 231 DAPTAEGTP-VPAFAGLTGWFNTDAPVDPRT--SGKVTLIDFWAYACINCQRNNTHLTKL 287

Query: 479 EKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPT 538
              YKD  F ++G+H+ ++  E + + +R A    GI +PV  D D   W+  G   WP 
Sbjct: 288 YAHYKDYGFDIIGIHAPEYAFEHEADNVRRAAREQGIEYPVAQDNDFATWKNFGNRYWPA 347

Query: 539 FAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570
             +V  +G L     GEG   + + L+   LL
Sbjct: 348 HYLVDKHGMLRQSHHGEGDYAETERLIRELLL 379


>gi|182412380|ref|YP_001817446.1| immunoglobulin I-set domain-containing protein [Opitutus terrae
           PB90-1]
 gi|177839594|gb|ACB73846.1| Immunoglobulin I-set domain protein [Opitutus terrae PB90-1]
          Length = 1130

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 164/375 (43%), Gaps = 50/375 (13%)

Query: 537 PTFAVVGPNGKL-LAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRL 595
           P+  VVGP+G L +A   G   RK         +   G    L   PL        D   
Sbjct: 127 PSALVVGPSGDLYVADSNGHAIRK---------VTPAGVVTTLAGGPLRYGYM---DGPG 174

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT 655
             +   +P  +A++     +F+SD + + I   D  GN     G  G  G  DG  D A 
Sbjct: 175 TEAQFSYPRGIAVN-ATGVIFVSDRSAHTIRRVDQLGNVSTWAGHGGSAGSADGPGDQAR 233

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           F  P+GLA +A  N+ YVAD  NH +R+I+   + V TLAG   + S +  G    ++  
Sbjct: 234 FRDPEGLAIDAAGNV-YVADINNHTIRKINPAGE-VTTLAGAAGE-SGFADGPAANARFF 290

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
             P  +   P              IW +  ++   R  S +G    +  ++         
Sbjct: 291 -CPTSLAIDPAGA-----------IWVNDAINRAIRKISPEGTVTTVADTAG-------- 330

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            GI++ P+ + +Y+A  +    R   L++G    +  G    P + +    R+G+G+   
Sbjct: 331 EGITIDPNGV-LYIAADD----RIKRLESGSVLSVVAG----PTDSYT--SRNGVGANAR 379

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEP 894
              P+G   A +G +YV DS  + I+++   S  VSTLAG+ G  GF+DG+  AAQ  + 
Sbjct: 380 FVQPIGSALAVDGNLYVTDSGGYAIRRVT-RSGEVSTLAGLLGYPGFRDGSGYAAQFRDL 438

Query: 895 AGIIEAQNGNLFIAD 909
            GI   + GNL + D
Sbjct: 439 RGITPDKEGNLLVGD 453



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 17/276 (6%)

Query: 644 EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
           +G RDG+   A FN   G+A  A   L+YVAD  N  +R I      V TLAG       
Sbjct: 57  KGSRDGAAAVARFNGANGVAI-APNGLVYVADLANSTIRAITPAG-VVTTLAGVANVHGC 114

Query: 704 YQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLN 763
             G   G++ L ++P  +   P  + +Y+A +  H I    T  GV    +G        
Sbjct: 115 IDG--VGSNALFHNPSALVVGPSGD-LYVADSNGHAI-RKVTPAGVVTTLAGGPLRYGYM 170

Query: 764 GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
                   F+ P GI+++   + I+V+D  + +IR ++ + G     AG       +   
Sbjct: 171 DGPGTEAQFSYPRGIAVNATGV-IFVSDRSAHTIRRVD-QLGNVSTWAG-------HGGS 221

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFK 882
            G  DG G +   + P G+     G +YVAD  NH I+K++PA   V+TLAG  G++GF 
Sbjct: 222 AGSADGPGDQARFRDPEGLAIDAAGNVYVADINNHTIRKINPA-GEVTTLAGAAGESGFA 280

Query: 883 DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           DG A  A+   P  +     G +++ D  N  IR +
Sbjct: 281 DGPAANARFFCPTSLAIDPAGAIWVNDAINRAIRKI 316



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 13/150 (8%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
           F   +G++++P+ + +YVAD  +S+IRA+    G    LAG   +        G  DG+G
Sbjct: 69  FNGANGVAIAPNGL-VYVADLANSTIRAIT-PAGVVTTLAGVANVH-------GCIDGVG 119

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGAALAA 889
           S  L  +P  +    +G +YVADS  H I+K+ PA   V+TLAG G  + G+ DG    A
Sbjct: 120 SNALFHNPSALVVGPSGDLYVADSNGHAIRKVTPA-GVVTTLAG-GPLRYGYMDGPGTEA 177

Query: 890 QLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           Q S P GI     G +F++D + + IR +D
Sbjct: 178 QFSYPRGIAVNATGVIFVSDRSAHTIRRVD 207



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 20/273 (7%)

Query: 647 RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG 706
           R+G   +A F +P G A     NL YV D+  +A+R +    + V TLAG       Y G
Sbjct: 371 RNGVGANARFVQPIGSALAVDGNL-YVTDSGGYAIRRVTRSGE-VSTLAGL----LGYPG 424

Query: 707 GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS 766
              G+             P  E   +   G+  I + +    VT     DG + + +G +
Sbjct: 425 FRDGSGYAAQFRDLRGITPDKEGNLLVGDGR-TIRKVTLAGAVTTIAGADGEDGDTDGPA 483

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
           + +  F    G+++      I+V D  +S+IR         ++  G    F     + G 
Sbjct: 484 A-SARFRAVDGLAVDSS-GNIFVVDRGASTIR---------KISQGIVTTFAGMPGETGQ 532

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGA 885
            DG G+    + P+G+       +YVAD+ N KI+K+ PA   V+T AG     G  DG 
Sbjct: 533 DDGAGAAARFRDPMGIVIDGADNLYVADTNNWKIRKVTPA-GVVTTFAGHTSTQGANDGP 591

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
              A    P G+    NG L++ D   + +R +
Sbjct: 592 IGIASFFNPYGLAIGPNGALYVVDLAGDTLRMI 624



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 17/260 (6%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           L + D    R V   L G      G+ GE+G  DG    A F    GLA ++  N+ +V 
Sbjct: 449 LLVGDGRTIRKVT--LAGAVTTIAGADGEDGDTDGPAASARFRAVDGLAVDSSGNI-FVV 505

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           D     +R+I      V T AG    G   Q    G +     P  +      + +Y+A 
Sbjct: 506 DRGASTIRKIS--QGIVTTFAG--MPGETGQDDGAGAAARFRDPMGIVIDGA-DNLYVAD 560

Query: 735 AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES 794
               +I    T  GV   F+G    +  N       SF  P G+++ P+   +YV D   
Sbjct: 561 TNNWKI-RKVTPAGVVTTFAGHTSTQGANDGPIGIASFFNPYGLAIGPN-GALYVVDLAG 618

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD 854
            ++R ++   G    L G       +  +    DG+G+      P+GV   + G I++ +
Sbjct: 619 DTLRMIS-PDGFVTTLGG------SSAHRGETADGIGTAARFYGPMGVSVDRFGIIHIIE 671

Query: 855 SYNHKIKKLDPASNRVSTLA 874
            Y + +++  P   R + ++
Sbjct: 672 YYTNLVRRGVPTGARTAVIS 691



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 123/323 (38%), Gaps = 26/323 (8%)

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT 655
           F  P+     LA+D     L+++DS    I      G      G  G  G RDGS   A 
Sbjct: 380 FVQPIG--SALAVD---GNLYVTDSGGYAIRRVTRSGEVSTLAGLLGYPGFRDGSGYAAQ 434

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           F   +G+  + + NLL     +   +R++      V T+AG   +  D  G     S   
Sbjct: 435 FRDLRGITPDKEGNLLV---GDGRTIRKVTLAG-AVTTIAGADGEDGDTDG--PAASARF 488

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
            +  D      +  +++   G   I + S   G+   F+G   E   +  +     F  P
Sbjct: 489 RA-VDGLAVDSSGNIFVVDRGASTIRKIS--QGIVTTFAGMPGETGQDDGAGAAARFRDP 545

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
            GI +      +YVAD+ +  IR +          AG    F  +    G  DG      
Sbjct: 546 MGIVID-GADNLYVADTNNWKIRKVT--------PAGVVTTFAGHTSTQGANDGPIGIAS 596

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG--IGKAGFKDGAALAAQLSE 893
             +P G+    NG +YV D     ++ + P    V+TL G    +    DG   AA+   
Sbjct: 597 FFNPYGLAIGPNGALYVVDLAGDTLRMISP-DGFVTTLGGSSAHRGETADGIGTAARFYG 655

Query: 894 PAGIIEAQNGNLFIADTNNNIIR 916
           P G+   + G + I +   N++R
Sbjct: 656 PMGVSVDRFGIIHIIEYYTNLVR 678


>gi|209885389|ref|YP_002289246.1| cytochrome c biogenesis protein, transmembrane region [Oligotropha
           carboxidovorans OM5]
 gi|337740991|ref|YP_004632719.1| cytochrome biogenesis protein [Oligotropha carboxidovorans OM5]
 gi|386030008|ref|YP_005950783.1| putative cytochrome biogenesis protein [Oligotropha carboxidovorans
           OM4]
 gi|209873585|gb|ACI93381.1| cytochrome c biogenesis protein, transmembrane region [Oligotropha
           carboxidovorans OM5]
 gi|336095076|gb|AEI02902.1| putative cytochrome biogenesis protein [Oligotropha carboxidovorans
           OM4]
 gi|336098655|gb|AEI06478.1| putative cytochrome biogenesis protein [Oligotropha carboxidovorans
           OM5]
          Length = 592

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 1/145 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+APL     L+GKVV++DFWTY CINC+  +P +    +KYKD    V
Sbjct: 278 LPPLDGAVEWLNSAPLS-AEALRGKVVLVDFWTYSCINCLRAIPYVRAWAEKYKDDGLVV 336

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  EK    ++ A+    I +PV  D +  +WR      WP    +   G + 
Sbjct: 337 IGVHTPEFAFEKRPANVKKALGDLKIDYPVAIDNNYAIWRAFNNMYWPAHYFIDAQGHIR 396

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGK 574
               GEG     + ++   L   GK
Sbjct: 397 HHHFGEGEYDKSEQVIRQLLREAGK 421


>gi|383777748|ref|YP_005462314.1| putative cytochrome c biogenesis protein DipZ [Actinoplanes
           missouriensis 431]
 gi|381370980|dbj|BAL87798.1| putative cytochrome c biogenesis protein DipZ [Actinoplanes
           missouriensis 431]
          Length = 417

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 4/142 (2%)

Query: 431 PEFPAKLDWLNT---APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPF 487
           P FP    WLNT    P+     L+GKVV++DFWT+ CINC HV+P ++   + +     
Sbjct: 273 PAFPQVTRWLNTPGGQPVDLA-ALRGKVVLVDFWTFDCINCRHVIPHIDSWYRDHHSQGL 331

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            VV VH+ ++  E+++ +++ A  R G+ +P+  D D   W    V +WPT  VV  +G 
Sbjct: 332 EVVSVHTPEYAFEREIGSVQAAAGRLGVGYPIAVDNDYASWSAWNVLAWPTIFVVDASGT 391

Query: 548 LLAQLAGEGHRKDLDDLVEAAL 569
           +     GEG     + ++E  L
Sbjct: 392 VRYIATGEGRYDQTERVIETLL 413


>gi|398331208|ref|ZP_10515913.1| hypothetical protein LalesM3_04029 [Leptospira alexanderi serovar
           Manhao 3 str. L 60]
          Length = 357

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 29/273 (10%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+FN P GL  +   N+ +V+D   + +R+ID   + + TL             
Sbjct: 70  DGTTQTASFNTPFGLELDTFGNI-FVSDQSANLIRKIDRFGN-ITTLF------------ 115

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767
              TS +L  P  + + PI E  Y++     QI++    D  +  ++G+           
Sbjct: 116 ---TSLVLRGPSGIKFDPITEDKYVSCKENAQIFKIDHTDQFS-LYAGNSDIEGFQNGDR 171

Query: 768 LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
           LN+ F  P  + L  +   +YV +  + +IR +NL +G    L+GG           G  
Sbjct: 172 LNSLFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGTVSTLSGGVS---------GYL 221

Query: 828 DGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAA 886
           DG  +    + PLG+ Y  K   + VAD  NH+I+K+D  ++ VST  G G     DG  
Sbjct: 222 DGDLASAQFKSPLGITYDQKTDSLLVADLQNHRIRKIDLKTSTVSTFLGNGIGASIDGKG 281

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           L A  + PA I    +G +F++DTN+N IR +D
Sbjct: 282 LNASFNGPAFISFDNSGYMFVSDTNSNKIRIVD 314



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 591 NDPRLFTS-PLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDG 649
           N   LFTS  L+ P  +  D +    ++S   + +I   D    F +  G+S  EG ++G
Sbjct: 110 NITTLFTSLVLRGPSGIKFDPITEDKYVSCKENAQIFKIDHTDQFSLYAGNSDIEGFQNG 169

Query: 650 SFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK 709
              ++ F  P  +  + ++N LYV +  NHA+R+I+  + TV TL+G G  G  Y  G+ 
Sbjct: 170 DRLNSLFKGPFFMDLDRERN-LYVGELGNHAIRKINLNSGTVSTLSG-GVSG--YLDGDL 225

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLN 769
            ++Q   SP  + Y    + + +A    H+I +          F G+G   +++G   LN
Sbjct: 226 ASAQ-FKSPLGITYDQKTDSLLVADLQNHRIRKIDLKTSTVSTFLGNGIGASIDG-KGLN 283

Query: 770 TSFAQPSGISL-SPDFMEIYVADSESSSIRALN 801
            SF  P+ IS  +  +M  +V+D+ S+ IR ++
Sbjct: 284 ASFNGPAFISFDNSGYM--FVSDTNSNKIRIVD 314



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 39/208 (18%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL----NLKT 804
           V   F+G G   +++G++    SF  P G+ L   F  I+V+D  ++ IR +    N+ T
Sbjct: 56  VISLFAGTGINVSIDGTTQ-TASFNTPFGLELDT-FGNIFVSDQSANLIRKIDRFGNITT 113

Query: 805 GGSRLLAGG------DPIFPD---------NLFKF----------------GDRDGMGSE 833
             + L+  G      DPI  D          +FK                 G ++G    
Sbjct: 114 LFTSLVLRGPSGIKFDPITEDKYVSCKENAQIFKIDHTDQFSLYAGNSDIEGFQNGDRLN 173

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSE 893
            L + P  +   +   +YV +  NH I+K++  S  VSTL+G G +G+ DG   +AQ   
Sbjct: 174 SLFKGPFFMDLDRERNLYVGELGNHAIRKINLNSGTVSTLSG-GVSGYLDGDLASAQFKS 232

Query: 894 PAGIIEAQNGN-LFIADTNNNIIRYLDL 920
           P GI   Q  + L +AD  N+ IR +DL
Sbjct: 233 PLGITYDQKTDSLLVADLQNHRIRKIDL 260



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 39/283 (13%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+    P  L +D   N +F+SD + N I   D  GN      S    G           
Sbjct: 75  TASFNTPFGLELDTFGN-IFVSDQSANLIRKIDRFGNITTLFTSLVLRG----------- 122

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG--TSQL 714
             P G+ ++      YV+  EN  + +ID   D     AGN    SD +G + G   + L
Sbjct: 123 --PSGIKFDPITEDKYVSCKENAQIFKIDHT-DQFSLYAGN----SDIEGFQNGDRLNSL 175

Query: 715 LNSPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772
              P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F
Sbjct: 176 FKGPF---FMDLDRERNLYVGELGNHAIRKINLNSGTVSTLSG-GVSGYLDGDLA-SAQF 230

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGG-SRLLAGGDPIFPDNLFKFGDRDGMG 831
             P GI+       + VAD ++  IR ++LKT   S  L  G              DG G
Sbjct: 231 KSPLGITYDQKTDSLLVADLQNHRIRKIDLKTSTVSTFLGNGIG---------ASIDGKG 281

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
                  P  +    +G ++V+D+ ++KI+ +DP  N VST+ 
Sbjct: 282 LNASFNGPAFISFDNSGYMFVSDTNSNKIRIVDPDLN-VSTIT 323


>gi|182417228|ref|ZP_02948587.1| phosphorylated carbohydrates phosphatase [Clostridium butyricum
           5521]
 gi|237665716|ref|ZP_04525704.1| phosphorylated carbohydrates phosphatase [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378953|gb|EDT76462.1| phosphorylated carbohydrates phosphatase [Clostridium butyricum
           5521]
 gi|237658663|gb|EEP56215.1| phosphorylated carbohydrates phosphatase [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 221

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 103/206 (50%), Gaps = 9/206 (4%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           K+  VLFDMDGV+ ++E+       +VF   G E+  E ++  MGTG  N +    +V G
Sbjct: 3   KLKGVLFDMDGVIFDTEKAYLETWTEVFQTYGYELKKETYISIMGTGRDNAVRTFKNVFG 62

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
                 E  K +  +  L +  +       PG  EL+   K   +K A+A+SA R + + 
Sbjct: 63  EMLPIEEMYKVK--DKMLKEIVESGKVCMKPGVKELLLYLKKNNIKTALATSARRWRAEI 120

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            L  A +   +FD +V  D    LKP P+IF+  +  L +   ECIVIED+ AG++AA  
Sbjct: 121 QLEMAEIN-GLFDVVVCGDEIRRLKPNPEIFIKTAGKLELEPEECIVIEDSPAGIKAAFD 179

Query: 258 AQMRCIAVTTTLSEERLKEASPSLIR 283
             M  I V      E LKEA  ++++
Sbjct: 180 GGMYGIHV------EDLKEADENILK 199


>gi|419763270|ref|ZP_14289514.1| cytochrome C biogenesis protein transmembrane region [Klebsiella
           pneumoniae subsp. pneumoniae DSM 30104]
 gi|397743955|gb|EJK91169.1| cytochrome C biogenesis protein transmembrane region [Klebsiella
           pneumoniae subsp. pneumoniae DSM 30104]
          Length = 396

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSNAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + +++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRVTYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|111222996|ref|YP_713790.1| phosphatase [Frankia alni ACN14a]
 gi|111150528|emb|CAJ62227.1| putative phosphatase [Frankia alni ACN14a]
          Length = 236

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 2/189 (1%)

Query: 80  SAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVK 139
           +AVLFDMDG+L ++E    RA  D+ A +G   T E     MG G    L  + S+ GV 
Sbjct: 15  AAVLFDMDGLLVDTERLWTRAQEDLAAHLGGVFTPEIKAALMGRGPDTALHLMLSLLGVD 74

Query: 140 GFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANL 199
           G   + A +      ++ +A P + +  PGA++L++   ++G+ +A+ SS+ R+ +D  L
Sbjct: 75  GSRFDEAARFVMGRIVELFAAPGAIVARPGAVDLLDALAAQGVPLALVSSSARVLMDHVL 134

Query: 200 AAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQ 259
            A G   + F   V+ D   + KP P+ +L AS++L  P + C+V+ED+ +G  A  AA 
Sbjct: 135 GAVG--AARFQVSVAGDEVVHGKPDPEPYLRASRLLAAPPARCVVLEDSASGATAGLAAG 192

Query: 260 MRCIAVTTT 268
              + V +T
Sbjct: 193 CVTVLVPST 201


>gi|445496654|ref|ZP_21463509.1| NHL repeat containing protein [Janthinobacterium sp. HH01]
 gi|444786649|gb|ELX08197.1| NHL repeat containing protein [Janthinobacterium sp. HH01]
          Length = 741

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 21/230 (9%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
           V ++AG+G  G++      G S     P+ V        +Y+A  G +       +DG T
Sbjct: 82  VTSIAGDGLPGAN---NGHGRSTRFADPFGVVIDGAGN-LYVADGGDNNSIRKIALDGAT 137

Query: 751 RAFSG--DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
              +G  +GY      +++ NT    PSG+++      +YVAD+ +++IR +  +   S 
Sbjct: 138 TTLAGGVEGYAEGAGKAAAFNT----PSGLAIDA-AGNLYVADTGNNAIRKVTPEGVVST 192

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
           L   G P         GD+DG G+      P+G+     G +YVAD+YN +I+++ P  +
Sbjct: 193 LAGDGLP---------GDKDGRGAAAQFNGPVGIAVDAAGVVYVADTYNDRIRRIAPNGD 243

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            V+T+AG  +AG  DGAA  A    P G+  +  G+L+IADT N+ IR L
Sbjct: 244 -VTTIAGGSRAGKADGAAAQALFDTPTGLALSAAGDLYIADTGNHAIRKL 292



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 150/322 (46%), Gaps = 56/322 (17%)

Query: 603 PGKLAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
           P  + ID   N L+++D  ++N I    LDG      G  G EG  +G+   A FN P G
Sbjct: 106 PFGVVIDGAGN-LYVADGGDNNSIRKIALDGATTTLAG--GVEGYAEGAGKAAAFNTPSG 162

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDV 721
           LA +A  N LYVADT N+A+R++      V TLAG+G  G D  G  +G +   N P  +
Sbjct: 163 LAIDAAGN-LYVADTGNNAIRKV-TPEGVVSTLAGDGLPG-DKDG--RGAAAQFNGPVGI 217

Query: 722 CYKPINEKVYIAMAGQHQI------WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
                   VY+A     +I       + +T+ G +RA   DG        ++    F  P
Sbjct: 218 AVDAAG-VVYVADTYNDRIRRIAPNGDVTTIAGGSRAGKADG--------AAAQALFDTP 268

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           +G++LS    ++Y+AD+ + +IR L  K G    +A  D           D D      L
Sbjct: 269 TGLALSA-AGDLYIADTGNHAIRKLG-KDGKVSTIAQAD-----------DDD---RNAL 312

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL--------AGIGKAGFKDGAAL 887
           L+ P+G+    +G +Y + + + ++ ++ PA + V TL         G G  G       
Sbjct: 313 LRAPVGLALTPDGYLYASSNSHGRLAQITPAGD-VLTLDDADHPPQPGYGSDG------- 364

Query: 888 AAQLSEPAGIIEAQNGNLFIAD 909
           + +L  P G+  A++G+LF+ D
Sbjct: 365 SVRLYAPRGVALAKDGSLFVTD 386



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 87/173 (50%), Gaps = 14/173 (8%)

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS-ESSSIRALNLKTGGSRLL 810
           + +GDG     NG    +T FA P G+ +      +YVAD  +++SIR + L  G +  L
Sbjct: 84  SIAGDGLPGANNGHGR-STRFADPFGVVID-GAGNLYVADGGDNNSIRKIALD-GATTTL 140

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AGG           G  +G G       P G+     G +YVAD+ N+ I+K+ P    V
Sbjct: 141 AGG---------VEGYAEGAGKAAAFNTPSGLAIDAAGNLYVADTGNNAIRKVTP-EGVV 190

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923
           STLAG G  G KDG   AAQ + P GI     G +++ADT N+ IR +  N +
Sbjct: 191 STLAGDGLPGDKDGRGAAAQFNGPVGIAVDAAGVVYVADTYNDRIRRIAPNGD 243


>gi|383813134|ref|ZP_09968560.1| Redoxin domain-containing protein [Serratia sp. M24T3]
 gi|383297862|gb|EIC86170.1| Redoxin domain-containing protein [Serratia sp. M24T3]
          Length = 580

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGK-VVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           +P     + WLN+ PL     LKGK VV++DFWTY CINC+  LP ++    KY+     
Sbjct: 265 MPSLNGAVQWLNSPPLT-AESLKGKKVVLVDFWTYSCINCLRALPYVKAWADKYRSQGLV 323

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           V+GVH+ +F  E+D+  + +   + G+ +P+  D +  +WR      WP    +   G++
Sbjct: 324 VIGVHAPEFAFERDINNVTSEAKKLGVDYPIAIDNNYTIWRAFNNQYWPAHYFIDAKGEM 383

Query: 549 LAQLAGEGHRKDLDDLVEAALLFYGKKKL 577
             +  GEG     + +++  L   G K +
Sbjct: 384 RYEHFGEGEYPQSERVIQELLKEAGAKNV 412


>gi|295095846|emb|CBK84936.1| Cytochrome c biogenesis protein [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 386

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +    KKY+     V
Sbjct: 243 LPSLSGGTGWVNGDPVT-SEALRGKVVLIDFWTWDCINCQHTLPHVRDWAKKYQSEGLVV 301

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L +++NAV ++ + + VV D +  +W   G   WP        G+L 
Sbjct: 302 IGVHTPEYPWEKPLSSVKNAVNKWQLPYRVVTDNNYKIWSAFGNQYWPAHYYFDAKGQLR 361

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 362 YTAFGEGNYDKQEAVIQQLL 381


>gi|401763703|ref|YP_006578710.1| dipZ [Enterobacter cloacae subsp. cloacae ENHKU01]
 gi|400175237|gb|AFP70086.1| dipZ [Enterobacter cloacae subsp. cloacae ENHKU01]
          Length = 359

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +     KY+     V
Sbjct: 216 LPSLSGGTGWINGDPVT-SESLRGKVVLIDFWTWDCINCQHTLPHVRDWATKYQSEGLVV 274

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK + +++NAV ++ + + VV D +  +W   G   WP        G+L 
Sbjct: 275 IGVHTPEYPWEKPISSVKNAVNKWQLPYRVVTDNNYQIWNAFGNQYWPAHYYFDAKGQLR 334

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+  + + +++  L
Sbjct: 335 YTSFGEGNYDEQEQVIQQLL 354


>gi|313884443|ref|ZP_07818204.1| HAD hydrolase, family IA, variant 3 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620227|gb|EFR31655.1| HAD hydrolase, family IA, variant 3 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 212

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 65/183 (35%), Positives = 98/183 (53%), Gaps = 2/183 (1%)

Query: 82  VLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGF 141
           ++FDMDGVL  SE     A   V A+ GV+V +     + G         + +   V   
Sbjct: 3   IIFDMDGVLIKSEYAYSLAIQRVLADHGVDVDLSYIDQYRGRSNPETWQEIIADFSVLDQ 62

Query: 142 DSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAA 201
            S+    R F  Y ++    +  I     LEL+N    KG +++VASS+   +++  + A
Sbjct: 63  ASDYYIDRVFS-YREEIVARDGIIPCDHILELLNAWHGKGYRMSVASSSPMSEIERTMDA 121

Query: 202 AGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMR 261
            G+  S F+ +V+ +A    KPAPDIFL ++K++N+   +CIVIED+  GVQAAK A M 
Sbjct: 122 LGIR-SYFEHLVTGEAVAQSKPAPDIFLYSAKLMNLEPKDCIVIEDSSHGVQAAKLAGMY 180

Query: 262 CIA 264
           CIA
Sbjct: 181 CIA 183


>gi|407002448|gb|EKE19199.1| HAD family hydrolase [uncultured bacterium]
          Length = 218

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 24/221 (10%)

Query: 79  VSAVLFDMDGVLCNSE----EPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVAS 134
           + A+LFDMDG+L +SE    E  RRA      + G+++T ED++    +G       V  
Sbjct: 6   IKAILFDMDGLLVDSEPLHFEAHRRA----LEKFGIQITKEDYIQNGVSGGRRSFYEVMQ 61

Query: 135 VKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           +K  K  D  A +K   EIY +   +     G    +E+++    +  ++AV S+     
Sbjct: 62  IKYHKPLDINAVRKLKKEIYGELIKQIEVFDGTKRIVEILH----RKYRIAVVSNTHPEY 117

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           +   LA  G+ V  F+ I SA   E  KP PD++ +A K L +  SEC+ +ED+ +G++A
Sbjct: 118 IQKTLAHVGM-VEYFETISSAKELERGKPFPDVYFNAMKKLGMEASECVAVEDSCSGIEA 176

Query: 255 AKAAQMRCIAVTTTLSEER-----------LKEASPSLIRK 284
           AK A +RCIA+    + ++           +KE   +L+ K
Sbjct: 177 AKNAGIRCIAIPNEFTSQQDLSRADVVIGSIKEMDKALVEK 217


>gi|167768216|ref|ZP_02440269.1| hypothetical protein CLOSS21_02772 [Clostridium sp. SS2/1]
 gi|167709740|gb|EDS20319.1| HAD hydrolase, family IA, variant 3 [Clostridium sp. SS2/1]
 gi|291560235|emb|CBL39035.1| haloacid dehalogenase superfamily, subfamily IA, variant 3 with
           third motif having DD or ED/haloacid dehalogenase
           superfamily, subfamily IA, variant 1 with third motif
           having Dx(3-4)D or Dx(3-4)E [butyrate-producing
           bacterium SSC/2]
          Length = 218

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 16/193 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           ++AV+FDMDGV+ +SE  + +A   +    G+EV       F+GT        +   K  
Sbjct: 2   ITAVIFDMDGVIADSEYFNVKAKHLILKRAGIEVDWHYHDKFLGTTHEYMWAEMK--KEF 59

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGI-------GFPGALELINQCKSKGLKVAVASSAD 191
           +  D E         Y+D++ +    +         PG ++LI   K KG  +AVASS+ 
Sbjct: 60  ESLDKEVP------YYIDQWVETRKELIDQEGLKPMPGVVDLIRTLKEKGFHLAVASSSL 113

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           +  +  N+   G+    F+A +S    EN KP P+IF  A++ +    + CIV+ED+ AG
Sbjct: 114 KEDIMTNMNTFGI-TDCFEAFISGSECENGKPDPEIFQKAAEAIGQKAANCIVVEDSEAG 172

Query: 252 VQAAKAAQMRCIA 264
           V+AAK+A+M+CI 
Sbjct: 173 VKAAKSAKMKCIG 185


>gi|397669335|ref|YP_006510870.1| cytochrome C biogenesis protein transmembrane region
           [Propionibacterium propionicum F0230a]
 gi|395142076|gb|AFN46183.1| cytochrome C biogenesis protein transmembrane region
           [Propionibacterium propionicum F0230a]
          Length = 554

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 6/150 (4%)

Query: 420 DVENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLE 479
           + E R+  P  PE      W+N+ P     DL+GKVV++DFWTY CINCM   P L    
Sbjct: 249 NAEQRQLGP-APELAGISHWVNSNPTTLA-DLRGKVVLVDFWTYSCINCMRTQPYLNAWY 306

Query: 480 KKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTF 539
            +Y+     ++GVH+ +F  EK  E +  AV   GI +PV  D D   WR      WP  
Sbjct: 307 DRYRAAGLEIIGVHAPEFTFEKVPENVEKAVRDAGIKYPVALDNDFATWRAYHNRYWPAK 366

Query: 540 AVVGPNGKLLAQLAGEGH----RKDLDDLV 565
            ++  +G +     GEG      K + DL+
Sbjct: 367 YLIDKDGNIRWTHFGEGSYDEAEKQIRDLL 396


>gi|418747486|ref|ZP_13303786.1| hypothetical protein LEP1GSC163_2583 [Leptospira santarosai str.
           CBC379]
 gi|410791609|gb|EKR89564.1| hypothetical protein LEP1GSC163_2583 [Leptospira santarosai str.
           CBC379]
          Length = 356

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 30/274 (10%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ +V+D   + +R+ID         +GN T  S     
Sbjct: 68  DGTTQTASFKTPFGLEVDTFGNI-FVSDQMANLIRKID--------RSGNVTTLS----- 113

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              T+ LL  P  + + PI    Y++     QI++   +D  +  A +  G +   NG  
Sbjct: 114 ---TNLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPLDQFSLYAGNSSGVDGFQNGDR 170

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+SF  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 171 -LNSSFKGPFFMDLDRE-RNLYVGELGNHAIRKINLNSGSVSTLSGG---------TLGY 219

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  +H+I+K+D  +  VST  G G     DG 
Sbjct: 220 LDGDLTSAQFKSPLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGIGADIDGN 279

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            L A L+ PA I    NG +F++DTN+N +R +D
Sbjct: 280 GLNASLNGPAFISLDNNGYMFVSDTNSNKVRIID 313



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 602 FPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQ 660
           F G   +D+   R L++ +  ++ I   +L+   +  + S G  G  DG    A F  P 
Sbjct: 175 FKGPFFMDLDRERNLYVGELGNHAIRKINLNSGSVSTL-SGGTLGYLDGDLTSAQFKSPL 233

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           G+ Y+ K + L VAD ++H +R+ID  N TV T  GNG  G+D  G   G +  LN P
Sbjct: 234 GITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI-GADIDG--NGLNASLNGP 288



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 34/286 (11%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +F+SD   N I   D  GN       S    L D        
Sbjct: 73  TASFKTPFGLEVDTFGN-IFVSDQMANLIRKIDRSGNVTTL---STNLLLED-------- 120

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  ++  + +ID + D     AGN +    +Q G++  S    
Sbjct: 121 --PSGIKFDPITGDKYVSCKDSAQIFKIDPL-DQFSLYAGNSSGVDGFQNGDRLNSSF-K 176

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
            P+   +  ++ +  +Y+   G H I + +   G     SG G    L+G  + +  F  
Sbjct: 177 GPF---FMDLDRERNLYVGELGNHAIRKINLNSGSVSTLSG-GTLGYLDGDLT-SAQFKS 231

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P GI+       + VAD +   IR ++LK        G             D DG G   
Sbjct: 232 PLGITYDQKTDSLLVADLQDHRIRKIDLKNATVSTFVGNGI--------GADIDGNGLNA 283

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS---TLAGIG 877
            L  P  +    NG ++V+D+ ++K++ +DP  N  +   T  GIG
Sbjct: 284 SLNGPAFISLDNNGYMFVSDTNSNKVRIIDPDLNVSTIPHTFTGIG 329



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ +   F  I+V+D  ++ IR ++       
Sbjct: 54  VVSLFAGTGIKESIDGTTQ-TASFKTPFGLEVDT-FGNIFVSDQMANLIRKID------- 104

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         + G+   + + +LL+ P G+ +    G  YV+   + +I K+DP  
Sbjct: 105 --------------RSGNVTTLSTNLLLEDPSGIKFDPITGDKYVSCKDSAQIFKIDPL- 149

Query: 868 NRVSTLAG--IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ +  N+ IR ++LN
Sbjct: 150 DQFSLYAGNSSGVDGFQNGDRLNSSFKGPFFMDLDRERNLYVGELGNHAIRKINLN 205


>gi|357008076|ref|ZP_09073075.1| copper amine oxidase domain-containing protein [Paenibacillus elgii
           B69]
          Length = 533

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 31/306 (10%)

Query: 635 IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           +  +  +G  G  DG+   A+F  P GL    K   + V+D+ N  +R++     TV T 
Sbjct: 44  MATLAGNGGLGSADGAGVSASFRMPGGLTV-LKDGTVLVSDSRNQLIRKLS--QGTVSTF 100

Query: 695 AGNGTKGSDYQG-------GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD 747
           AG   K  D +G         K  + L N P  +     N  VY+A +G H I +  T  
Sbjct: 101 AGAAYK-QDSKGFPVGALLDGKSDASLFNEPQGLAADA-NGNVYVADSGNHAIRKIDTA- 157

Query: 748 GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS 807
           G     +G+G     +G    +  F +P+ ++++ D   +YVADS + +IR+++  +G  
Sbjct: 158 GQVSTVAGNGLLGRKDGEGK-DALFYRPTDVAVAADGT-LYVADSLNHAIRSIS-PSGEV 214

Query: 808 RLLAGGDP----IFPDNLFKFGD-RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
           + L    P    +FP  +   GD  DG         P  +     G + V+DS N +I+ 
Sbjct: 215 KTLNALSPRVVELFPGQVSPAGDFADGDLKSAKFNEPTALVLDAKGNLIVSDSGNQRIRY 274

Query: 863 LDPASNRVSTLAGIGKA----------GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           +D    +V+TLAG G+A          GF DG+A  A+ S P G+   + G L IAD+ N
Sbjct: 275 IDLQQGKVTTLAGGGQAATNKELHVQGGFADGSASDARFSFPMGLALTEEGGLVIADSQN 334

Query: 913 NIIRYL 918
           + IRYL
Sbjct: 335 HAIRYL 340



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 183/443 (41%), Gaps = 100/443 (22%)

Query: 693  TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
            TLAGNG  GS       G S     P  +    + +   +    ++Q+    +  G    
Sbjct: 46   TLAGNGGLGS---ADGAGVSASFRMPGGLTV--LKDGTVLVSDSRNQLIRKLS-QGTVST 99

Query: 753  FSGDGYERN---------LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
            F+G  Y+++         L+G S  +  F +P G++   +   +YVADS + +IR ++  
Sbjct: 100  FAGAAYKQDSKGFPVGALLDGKSDASL-FNEPQGLAADANG-NVYVADSGNHAIRKID-- 155

Query: 804  TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
            T G      G+ +        G +DG G + L   P  V  A +G +YVADS NH I+ +
Sbjct: 156  TAGQVSTVAGNGLL-------GRKDGEGKDALFYRPTDVAVAADGTLYVADSLNHAIRSI 208

Query: 864  DPASNRVSTL------------AGIGKAG-FKDGAALAAQLSEPAGIIEAQNGNLFIADT 910
             P S  V TL              +  AG F DG   +A+ +EP  ++    GNL ++D+
Sbjct: 209  SP-SGEVKTLNALSPRVVELFPGQVSPAGDFADGDLKSAKFNEPTALVLDAKGNLIVSDS 267

Query: 911  NNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGN 970
             N  IRY+DL  ++ ++ TL   G Q  T K                 + V GG ++   
Sbjct: 268  GNQRIRYIDL--QQGKVTTLA-GGGQAATNKE----------------LHVQGGFADGSA 308

Query: 971  IYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDGNLSP---------------EGS 1015
               + S P     ++E      V  + +N  I   LDG +S                EGS
Sbjct: 309  SDARFSFPMGLALTEEGG---LVIADSQNHAIRYLLDGQVSTIAGAADRITGNADGIEGS 365

Query: 1016 AVLHFRRMSPSV-STGRI-SCKVYYCKEDEVCLYKPLLFEVPFQEEVPNSPPAEIT---- 1069
            A LH R M  +V + G I +   Y  K  EV LY+           +P+  P + T    
Sbjct: 366  AALH-RPMDVAVLADGSILAADTYNNKLREVSLYR-----------LPDGLPKDGTVKVV 413

Query: 1070 -----LPYDLKPKILTNSLQLPV 1087
                 + ++ +P+I+     +P+
Sbjct: 414  VDRQQIAFEAQPEIVNGRTMVPI 436


>gi|297564660|ref|YP_003683632.1| HAD-superfamily hydrolase [Meiothermus silvanus DSM 9946]
 gi|296849109|gb|ADH62124.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Meiothermus
           silvanus DSM 9946]
          Length = 218

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 9/193 (4%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANF--LGGVASVKGV 138
           A++FD+DG + +SE    RA   V+AE G  + +E +LP +GT E  F  L  + S+ G 
Sbjct: 3   ALIFDLDGTIFDSETAIFRAWQTVYAEQGATLPLETWLPLIGTNEVQFDPLAHIESLVGH 62

Query: 139 K-GFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
               D    + R  E    +Y      +  PG    +   +  GL +AVASS+ R  V+ 
Sbjct: 63  PVDHDRVLERARTLE---REYVDATDAL--PGVRRYLETAREMGLLLAVASSSGREWVEG 117

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
           +L   GL    F  + + D  E  KP P +FL A++ L V  +E +VIED+L G++AA+A
Sbjct: 118 HLQRLGLR-GFFSVLRTRDDVERTKPDPALFLQAAEGLGVQPAEALVIEDSLNGIKAAQA 176

Query: 258 AQMRCIAVTTTLS 270
           A MR +AV   ++
Sbjct: 177 AGMRVVAVPNPIT 189


>gi|290977893|ref|XP_002671671.1| predicted protein [Naegleria gruberi]
 gi|284085242|gb|EFC38927.1| predicted protein [Naegleria gruberi]
          Length = 3330

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 140/278 (50%), Gaps = 38/278 (13%)

Query: 654  ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTS 712
            +T N P+G+    +K  LY++D+ NH +R ID     + TLAGNG   +++ G G   T 
Sbjct: 2324 STLNNPRGIFLKNQK--LYISDSNNHRIRVIDIQTGLISTLAGNGI--ANFSGDGLAATE 2379

Query: 713  QLLNSPWDVCYKPINEKVYIAMAGQHQIWE------HSTVDGV-TRAFSGDGYERNLNGS 765
              LNSP  V       K+YI+ +G H+I         STV G     FSGD      NG 
Sbjct: 2380 ASLNSPSGVFVSEFG-KIYISDSGNHRIRAILPNGIISTVGGNGIPGFSGD------NGL 2432

Query: 766  SSLNTSFAQPSGI--SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLF 822
            ++ N S   P GI  + S D +   ++DS+++ IR ++ + G    LAG G+        
Sbjct: 2433 AT-NASLNNPYGIVETYSGDLI---ISDSDNNRIRLID-RYGIITTLAGTGEK------- 2480

Query: 823  KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
              G +DG   + L  +P  ++   + ++Y++D+Y  +I++ +  S  V T+ G G+ G+ 
Sbjct: 2481 --GFQDGFFLDALFNNPSQLFYF-HSRLYISDTYGQRIREANLESKTVKTIIGTGEKGYN 2537

Query: 883  -DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
             D      QL+ P  +    N  ++IADT+N  IR L+
Sbjct: 2538 GDNFPTTTQLNNPLSMFITYNNIIYIADTDNKKIRMLN 2575



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 57/350 (16%)

Query: 611  LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT-FNRPQGL--AYNAK 667
             ++RL+ISD+   RI   +L+   +  I  +GE+G    +F   T  N P  +   YN  
Sbjct: 2501 FHSRLYISDTYGQRIREANLESKTVKTIIGTGEKGYNGDNFPTTTQLNNPLSMFITYN-- 2558

Query: 668  KNLLYVADTENHALREIDFVNDTVRTLA--------------------GNGTKGSDYQGG 707
             N++Y+ADT+N  +R ++     V TL                     GN  K  D   G
Sbjct: 2559 -NIIYIADTDNKKIRMLN--TGIVSTLELTFESPKGITGDDKFLYITDGNLVKKIDIANG 2615

Query: 708  EK--GTSQLLNSPWDVCYKPIN---------EKVYIAMAGQHQIWEHSTVDGVTRAFSGD 756
             +       +   W + Y  +N         + VY   +  + + + +T++G+    +G 
Sbjct: 2616 YRVEIIGGGIGDGWYLKYAILNAENLAFDDEKNVYFTDSSHNVVRKFNTMNGIVSTVAGR 2675

Query: 757  ----GYERNLNGSSSLNTSFAQPSGISLSPDFME--IYVADSESSSIRALNLKTGGSRLL 810
                GYE +  G  ++      P GI++S   +   +Y+ D E+  IR +NL+TG    +
Sbjct: 2676 TSTLGYEGD--GGLAVGALLNFPKGIAVSKSSLGFFLYICDFENQRIRRVNLETGIITTV 2733

Query: 811  AG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVAD-SYNHKIKKLDPASN 868
             G G   +       GD  G+     + +P  +   K G+++ +D +Y  KI + +    
Sbjct: 2734 VGTGQKGYS------GD-GGLAIYAKITNPTHIAVNKEGEVFFSDYNYVRKITR-NGYVY 2785

Query: 869  RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            R+S   G          AL    S    ++    G++ + D NN IIR L
Sbjct: 2786 RISGAQGGTDFNGDSYPALETGFSITKTLMVDNTGSIVVFDYNNQIIRKL 2835



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 49/219 (22%)

Query: 615  LFISDSNHNRI--------VVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA 666
            ++ +DS+HN +        +V+ + G     +G  G+ GL  G    A  N P+G+A  +
Sbjct: 2649 VYFTDSSHNVVRKFNTMNGIVSTVAGR-TSTLGYEGDGGLAVG----ALLNFPKGIAV-S 2702

Query: 667  KKNL---LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723
            K +L   LY+ D EN  +R ++     + T+ G G KG    GG               Y
Sbjct: 2703 KSSLGFFLYICDFENQRIRRVNLETGIITTVVGTGQKGYSGDGGL------------AIY 2750

Query: 724  KPINEKVYIAMAGQHQIW--EHSTVDGVTRAFSGDGYERNLNGSSSLNTSF------AQP 775
              I    +IA+  + +++  +++ V  +TR    +GY   ++G+    T F      A  
Sbjct: 2751 AKITNPTHIAVNKEGEVFFSDYNYVRKITR----NGYVYRISGAQG-GTDFNGDSYPALE 2805

Query: 776  SGISLSPDFM-----EIYVADSESSSIRAL--NLKTGGS 807
            +G S++   M      I V D  +  IR L  + +TG S
Sbjct: 2806 TGFSITKTLMVDNTGSIVVFDYNNQIIRKLIPHCETGYS 2844


>gi|441506011|ref|ZP_20987989.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Photobacterium sp. AK15]
 gi|441426361|gb|ELR63845.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Photobacterium sp. AK15]
          Length = 217

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A +FDMDG+L +SE   + A VDVF+ +GV++  +D L  MG      +      +  
Sbjct: 2   LQAAVFDMDGLLVDSEPFWQLAQVDVFSSLGVKIEQKDTLQTMGLRIDQVVEFWFGKQPW 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
           +G D  A         +++  K +  +  PG  E IN C+  GLK+A+ASS+    + A 
Sbjct: 62  EGADC-ATVTNMIVARVEELIKEHKPM-LPGVCEAINACEQYGLKIALASSSPMSLIQAT 119

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           L A  L    F A++SA+A    KP P+++++A+  L V    C+  ED++ G+ AAKAA
Sbjct: 120 LEALSLE-DKFSAVLSAEALRYGKPHPEVYINAADALGVAPQACVAFEDSVNGLLAAKAA 178

Query: 259 QMRCIAV 265
           QM+ +AV
Sbjct: 179 QMKGVAV 185


>gi|91773520|ref|YP_566212.1| HAD family hydrolase [Methanococcoides burtonii DSM 6242]
 gi|91712535|gb|ABE52462.1| Haloacid dehalogenase-like hydrolase [Methanococcoides burtonii DSM
           6242]
          Length = 232

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 5/199 (2%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A++FDMDGVL +S      A   VFAEMG  +         G+     +  +    G+
Sbjct: 2   LKALIFDMDGVLVDSMPYHTEALSHVFAEMGFSMDARHVYNMEGSKTVEIVRFLLEKDGI 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
              + +         Y D++A+      F   LE +   K +   +AV S ADR  V   
Sbjct: 62  DLLEVDV--DELIHRYRDEFARIVELKAFSEVLECLPILKER-FMLAVVSGADRNIVQDI 118

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +    L   +FD ++S +  +N KPAPD FLSA+ +  +  +EC+V+E+A  GV+AA  A
Sbjct: 119 IT--NLYGGIFDVVISGEDVDNGKPAPDPFLSAADMFGLDANECLVVENAAMGVEAANRA 176

Query: 259 QMRCIAVTTTLSEERLKEA 277
            M C+AV T +S+E LK A
Sbjct: 177 GMFCLAVPTYVSKESLKNA 195


>gi|325289117|ref|YP_004265298.1| HAD-superfamily hydrolase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964518|gb|ADY55297.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 218

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 3/190 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           V AV+FDMDGV+ +SE     +      + GVE+T E+   ++G         +    G+
Sbjct: 5   VKAVIFDMDGVIIDSEPIHFVSDQMTLQDYGVEITNEELSKYVGISNPVMWSELREKYGL 64

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
                E   K+ +   L    +    I   G   L+   K  GLK+ +ASS+ R  ++  
Sbjct: 65  AAAVEELLAKQMYYKKLLFGGRELQCI--EGIESLLRNLKHSGLKIGLASSSPREFIEII 122

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +   GL    F+A+VS +  E  KPAPD+FL A+++L V  S+C+VIED+  GV+AAKAA
Sbjct: 123 INNLGLA-GYFEAVVSGEEVERSKPAPDVFLRAAELLKVNPSDCMVIEDSEHGVKAAKAA 181

Query: 259 QMRCIAVTTT 268
            M+CI    T
Sbjct: 182 GMKCIGYLNT 191


>gi|116625892|ref|YP_828048.1| NHL repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229054|gb|ABJ87763.1| NHL repeat containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 2384

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 166/356 (46%), Gaps = 41/356 (11%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFN 657
           L  PG + +D  NN +FI+DS +NR+VV       + QI  +G        GS   ++ N
Sbjct: 51  LVAPGGIWVDASNN-VFIADSGNNRVVVVQYPSGILYQIAGNGTATSSGDGGSALQSSVN 109

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
           RP GLA +   NL Y+++ + + +R ID     + T+AG G +G    GG  G++Q L+ 
Sbjct: 110 RPMGLAADFNGNL-YISEFQGNRIRRIDMQTGMISTVAGTGVQGFAGDGGLAGSAQ-LSH 167

Query: 718 PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL-NGSSSLNTSFAQPS 776
           P  + +      +YIA  G  +I       GV    +GDG      +G  +     +QP 
Sbjct: 168 PAGIAFDSAGN-LYIADMGNFRIRRIDGQTGVITTIAGDGSNTTSPDGVLAAGAGLSQP- 225

Query: 777 GISLSPD-FMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSE- 833
            I ++PD    + V++  +  IR ++L  GG   +AG G+  F          DG+ ++ 
Sbjct: 226 -IWVAPDRSGGLLVSEMGAMRIRRVDLAGGGLTTVAGNGNANF--------TGDGVPAQN 276

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG-------KAGFK---- 882
             +  PLG+    NG +  AD    ++++++ A+  ++T+AG G        AG      
Sbjct: 277 AGIGGPLGLTVFVNGDVLFADG-TGRVRRVEAATGLITTVAGNGTGPHGVSTAGGGSSSP 335

Query: 883 ---------DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQT 929
                    +G A +A L  P G++   +GNL I+D+ +  +R ++     P   T
Sbjct: 336 SCYAAVIGDNGPATSATLDGPFGVLLTTSGNLLISDSLDCRVRAVNFPSSYPFTNT 391


>gi|392979106|ref|YP_006477694.1| putative cytochrome c biogenesis protein [Enterobacter cloacae
           subsp. dissolvens SDM]
 gi|392325039|gb|AFM59992.1| putative cytochrome c biogenesis protein [Enterobacter cloacae
           subsp. dissolvens SDM]
          Length = 396

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 17/181 (9%)

Query: 402 EGGSSQSERIQQFVNYISDVENRKTTPI-------------VPEFPAKLDWLNTAPLQFR 448
           +G +  ++R++   N +  +    TTP+             +P       W+N  P+   
Sbjct: 215 KGANGVADRLE---NSLLSLAKPTTTPVKLQPVVMTEPSSQLPSLSGGTGWINGDPVT-S 270

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
             L+GKVV++DFWT+ CINC H LP +    KKY+     V+GVH+ ++  EK L +++ 
Sbjct: 271 DSLRGKVVLIDFWTWDCINCQHTLPHVRDWAKKYQSQGLVVIGVHTPEYPWEKPLASVQK 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV ++ + + VV D +  +W   G   WP        G+L     GEG+    + +++  
Sbjct: 331 AVTKWQLPYRVVTDNNYQIWNAFGNQYWPAHYYFDAKGQLRYTSFGEGNYDQQEKVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|383808448|ref|ZP_09963990.1| cytochrome C biogenesis protein transmembrane region / antioxidant,
           AhpC/TSA family multi-domain protein [Rothia aeria
           F0474]
 gi|383448730|gb|EID51685.1| cytochrome C biogenesis protein transmembrane region / antioxidant,
           AhpC/TSA family multi-domain protein [Rothia aeria
           F0474]
          Length = 603

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 4/142 (2%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE        NT       +L+GKV ++DFW Y CINC    P L  L  KY+D    +V
Sbjct: 308 PEIAGGTGNFNTKNQPTLANLRGKVTLVDFWAYSCINCQRTAPHLNELYAKYRDYGLEIV 367

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E + + ++  +   GI +PVV D D  +WR      WP   ++   GKL A
Sbjct: 368 GVHTPEYAFEHEGKNVQAGIENLGIKYPVVQDNDYAIWRAYSNRYWPAHYLIDSEGKLRA 427

Query: 551 QLAGEGHRK----DLDDLVEAA 568
              GEG  K     + +L++AA
Sbjct: 428 VHYGEGGHKVTEAQVRELLKAA 449


>gi|389683645|ref|ZP_10174976.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas chlororaphis O6]
 gi|388551984|gb|EIM15246.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas chlororaphis O6]
          Length = 406

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 11/179 (6%)

Query: 401 TEGGSSQSERIQQFV----NYISD------VENRKTTPIVPEFPAKLDWLNTAPLQFRRD 450
           ++GG++  + + + V    +Y+ D      VE       +P     + WLN+ PL     
Sbjct: 223 SQGGAALEQGLLKSVPKALDYLIDKAGAAPVETLPNKGPMPSLSGAVQWLNSPPLD-AEA 281

Query: 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAV 510
           L+GKVV++DFWTY CINC H LP +    KKY      V+GVH+ ++  EK ++ ++  V
Sbjct: 282 LRGKVVLVDFWTYDCINCQHSLPYVNAWAKKYAKDGLVVIGVHTPEYAFEKVIDNVKAQV 341

Query: 511 LRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            +  I +PV  D D  +WR      WP    +   G++     GEG  +  + +++  L
Sbjct: 342 RKLDIGYPVAIDNDYAIWRAFDNQYWPAHYFIDARGQVRYSHFGEGSYEAQEQVIQQLL 400


>gi|21226798|ref|NP_632720.1| Beta-phosphoglucomutase [Methanosarcina mazei Go1]
 gi|20905094|gb|AAM30392.1| Beta-phosphoglucomutase [Methanosarcina mazei Go1]
          Length = 226

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 9/201 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGV--ASVK 136
           + A++FDMDGVL +S      A    F EMG+E+  ED     G+   N L  +   + K
Sbjct: 2   LKALIFDMDGVLVDSMPFHAAAWKKAFLEMGMEIQDEDIYAIEGSNPRNGLPLLIRKARK 61

Query: 137 GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
             + FD EA       IY  ++ +      F G  E +   KS+ L ++V S +DR+ V 
Sbjct: 62  EPEDFDFEAITS----IYRQEFNRIFKLKAFDGMKECLEFLKSRFL-LSVVSGSDRLIV- 115

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
            N     L   +FD +V+ D   N KP PD FL A ++LNV   EC+VIE+A+ GV+AAK
Sbjct: 116 -NGIVDQLFPGIFDTVVTGDDVLNSKPDPDPFLKAVELLNVGKEECVVIENAVLGVEAAK 174

Query: 257 AAQMRCIAVTTTLSEERLKEA 277
            A + CI V T +    L  A
Sbjct: 175 KADIYCIGVPTYVKPSELDRA 195


>gi|425899204|ref|ZP_18875795.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
 gi|397890882|gb|EJL07364.1| cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family
           [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
          Length = 406

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     L+GKVV++DFWTY CINC H LP +    KKY      V
Sbjct: 262 MPSLSGAVQWLNSPPLD-AEALRGKVVLVDFWTYDCINCQHSLPYVNAWAKKYAKDGLVV 320

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK ++ ++  V +  I +PV  D D  +WR      WP    +   G++ 
Sbjct: 321 IGVHTPEYAFEKVIDNVKAQVRKLDIGYPVAIDNDYAIWRAFDNQYWPAHYFIDARGQVR 380

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 381 YSHFGEGSYETQEQVIQQLL 400


>gi|344998172|ref|YP_004801026.1| HAD-superfamily hydrolase [Streptomyces sp. SirexAA-E]
 gi|344313798|gb|AEN08486.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Streptomyces
           sp. SirexAA-E]
          Length = 242

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 68/192 (35%), Positives = 102/192 (53%), Gaps = 7/192 (3%)

Query: 82  VLFDMDGVLCNSEEPSRRAAVDVFAEMGV-EVTVEDFLPFMGTGEANFLGGVASVKGVKG 140
           VLFD+DG L +SE     A   + A  GV +   +D   F+G G    L  + +  G++ 
Sbjct: 8   VLFDLDGTLVDSEPNYYEAGRRLLARYGVRDFGWDDHARFIGVGTRETLTTLRAEYGIEA 67

Query: 141 -FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANL 199
             D   A K    +YL+   +  S   FP    L+ +   +G+ +AVAS + R  + A L
Sbjct: 68  PVDELLAGKN--ALYLELAGR--STEAFPEMRALVERLHRRGVPMAVASGSSRAVIAATL 123

Query: 200 AAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQ 259
           A  GL   +    VSA+   + KPAPD+FL A++ L    + C+V+EDA+ GV+AA+AA 
Sbjct: 124 AVTGLDAHL-PLYVSAEEVAHGKPAPDVFLEAARRLGAEPASCVVLEDAVPGVEAARAAG 182

Query: 260 MRCIAVTTTLSE 271
           MRC+AV    +E
Sbjct: 183 MRCVAVPYVEAE 194


>gi|395793586|ref|ZP_10472953.1| transmembrane protein [Pseudomonas sp. Ag1]
 gi|421140335|ref|ZP_15600349.1| Cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           fluorescens BBc6R8]
 gi|395342262|gb|EJF74036.1| transmembrane protein [Pseudomonas sp. Ag1]
 gi|404508484|gb|EKA22440.1| Cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           fluorescens BBc6R8]
          Length = 196

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     + WLN+ PL     LKGKVV++DFWTY C+NC   LP +    KKY      V
Sbjct: 48  MPSLDGAVAWLNSPPLT-AEGLKGKVVLVDFWTYDCVNCQRSLPYVNQWAKKYARDGLVV 106

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +   EK L+ +R+ V +  I +PV  D D  +WR      WP        GK+ 
Sbjct: 107 IGVHTPENAYEKVLDNVRSQVKKLDIHYPVAIDNDYRIWRAFDNQYWPAHYFFDATGKVR 166

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   + + +++A L
Sbjct: 167 YSHFGEGRYDNQEKVIQALL 186


>gi|255531263|ref|YP_003091635.1| NHL repeat containing protein [Pedobacter heparinus DSM 2366]
 gi|255344247|gb|ACU03573.1| NHL repeat containing protein [Pedobacter heparinus DSM 2366]
          Length = 646

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 151/328 (46%), Gaps = 45/328 (13%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LAID   N ++I+D N+N I      G  +     +G  G  DG+   A FN P  +
Sbjct: 352 PEGLAIDASGN-MYIADKNNNVIRKITSTGT-VSTFAGTGVAGFADGAGSIAKFNGPWKV 409

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A +A  N+ YVAD +N  +R+I      V TLAG+ T G  Y  G    ++ +  P DV 
Sbjct: 410 AVDATGNV-YVADRDNFKIRKITPAG-IVSTLAGS-TAG--YADGTGSAAKFMQ-PLDVA 463

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
             P +  V +A    H+I    T  GV    +G+G     NG+ +    F  PSG+ +  
Sbjct: 464 IDP-SGNVIVADNTSHRI-RKITAAGVVTTIAGNGTAGYTNGTGTA-AQFKNPSGVDVDA 520

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRL----------LAGGDPIFPDNLFKFGDRDGMGS 832
               IYVAD  +  IR +      S L           A G   F D             
Sbjct: 521 S-GNIYVADRLNHRIRKITTSGVVSSLAGTGTSGTTDGAAGSAKFSD------------- 566

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892
                 P GV    +G +YVAD  + +I+K+  +S +VSTLAG    G+++G +  A+ +
Sbjct: 567 ------PYGVTVDVSGNVYVADLISSRIRKI--SSGQVSTLAGT-IPGYQNGTSTIAKFN 617

Query: 893 EPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           +P  ++  Q  N++IAD +NN IR + L
Sbjct: 618 QPTDLV-IQGSNIYIADHSNNSIRLVKL 644



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 24/278 (8%)

Query: 641 SGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTK 700
           +G  GL +G+   A F+ P+GLA +A  N+ Y+AD  N+ +R+I     TV T AG G  
Sbjct: 334 TGTAGLVNGAKASARFDSPEGLAIDASGNM-YIADKNNNVIRKITSTG-TVSTFAGTGVA 391

Query: 701 GSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD--GY 758
           G  +  G  G+    N PW V        VY+A     +I    T  G+    +G   GY
Sbjct: 392 G--FADGA-GSIAKFNGPWKVAVDATGN-VYVADRDNFKI-RKITPAGIVSTLAGSTAGY 446

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
               +G+ S    F QP  +++ P    + VAD+ S  IR +    G    +AG      
Sbjct: 447 A---DGTGSA-AKFMQPLDVAIDPS-GNVIVADNTSHRIRKIT-AAGVVTTIAGNGTA-- 498

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK 878
                 G  +G G+    ++P GV    +G IYVAD  NH+I+K+   S  VS+LAG G 
Sbjct: 499 ------GYTNGTGTAAQFKNPSGVDVDASGNIYVADRLNHRIRKI-TTSGVVSSLAGTGT 551

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           +G  DGAA +A+ S+P G+    +GN+++AD  ++ IR
Sbjct: 552 SGTTDGAAGSAKFSDPYGVTVDVSGNVYVADLISSRIR 589



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 18/226 (7%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
           V   AG GT G     G K +++  +SP  +     +  +YIA    + +    T  G  
Sbjct: 328 VSNYAGTGTAG--LVNGAKASARF-DSPEGLAIDA-SGNMYIADK-NNNVIRKITSTGTV 382

Query: 751 RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL 810
             F+G G     +G+ S+   F  P  +++      +YVAD ++  IR +    G    L
Sbjct: 383 STFAGTGVAGFADGAGSI-AKFNGPWKVAVDAT-GNVYVADRDNFKIRKIT-PAGIVSTL 439

Query: 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV 870
           AG            G  DG GS      PL V    +G + VAD+ +H+I+K+  A+  V
Sbjct: 440 AGSTA---------GYADGTGSAAKFMQPLDVAIDPSGNVIVADNTSHRIRKI-TAAGVV 489

Query: 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           +T+AG G AG+ +G   AAQ   P+G+    +GN+++AD  N+ IR
Sbjct: 490 TTIAGNGTAGYTNGTGTAAQFKNPSGVDVDASGNIYVADRLNHRIR 535


>gi|290985345|ref|XP_002675386.1| predicted protein [Naegleria gruberi]
 gi|284088982|gb|EFC42642.1| predicted protein [Naegleria gruberi]
          Length = 788

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 162/312 (51%), Gaps = 24/312 (7%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIG-SSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670
           N+ ++I+D +++R+     DG  +   G S G  G   G    A  + P  +A ++  N 
Sbjct: 52  NDEIYIADRDNHRVRKILKDGTMVTIAGWSFGGFGGDGGPATSAMLDFPTSIAVSSD-NE 110

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +Y+AD   + +R+I   N  + T+AG G +G    GG    +Q+ ++ W++     NE  
Sbjct: 111 VYIADLGIYRIRKI-LRNGNIVTIAGTGEEGFSGDGGPAINAQI-SAVWNIALSQNNELY 168

Query: 731 YIAMAGQH--QIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
           ++  +     +I  + T+  VT A +G DG+  +  G  ++N     P  + +S D  E+
Sbjct: 169 FVDYSNCRIRKILRNGTI--VTIAGTGEDGFSGD--GGLAINAKLGYPCSVFVSKD-DEV 223

Query: 788 YVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           Y+ADS+++ +R + L+ G    +AG G+  F       GD  G  +   L  P GV+ + 
Sbjct: 224 YIADSQNNRVRKI-LRNGIINTIAGTGEEGFS------GD-GGPATNAQLNVPCGVFVSA 275

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQLSEPAGIIEAQNGN 904
             ++Y+ DS N +I+K+   +  ++T+AG G+ G+    G A+ AQ+S    I  +QN  
Sbjct: 276 TNEVYIVDSGNCRIRKI-LRNGIINTIAGTGEEGYSGDGGPAINAQISNVYNIFVSQNDE 334

Query: 905 LFIADTNNNIIR 916
           ++IADTNN+ IR
Sbjct: 335 VYIADTNNHRIR 346



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 137/274 (50%), Gaps = 31/274 (11%)

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
           DA  N P  + + A  + +Y+AD +NH +R+I   + T+ T+AG  + G     G   TS
Sbjct: 38  DAMLNCPVEV-FVAPNDEIYIADRDNHRVRKI-LKDGTMVTIAG-WSFGGFGGDGGPATS 94

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEH------STVDGV-TRAFSGDGYERNLNGS 765
            +L+ P  +     NE VYIA  G ++I +        T+ G     FSGDG        
Sbjct: 95  AMLDFPTSIAVSSDNE-VYIADLGIYRIRKILRNGNIVTIAGTGEEGFSGDG-------G 146

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKF 824
            ++N   +    I+LS +  E+Y  D  +  IR + L+ G    +AG G+  F       
Sbjct: 147 PAINAQISAVWNIALSQN-NELYFVDYSNCRIRKI-LRNGTIVTIAGTGEDGFS------ 198

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-- 882
           GD  G+     L +P  V+ +K+ ++Y+ADS N++++K+   +  ++T+AG G+ GF   
Sbjct: 199 GD-GGLAINAKLGYPCSVFVSKDDEVYIADSQNNRVRKI-LRNGIINTIAGTGEEGFSGD 256

Query: 883 DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            G A  AQL+ P G+  +    ++I D+ N  IR
Sbjct: 257 GGPATNAQLNVPCGVFVSATNEVYIVDSGNCRIR 290



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 25/291 (8%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFDDAT 655
           ++ L FP  +A+   +N ++I+D    RI     +GN IV I  +GEEG   DG      
Sbjct: 94  SAMLDFPTSIAVS-SDNEVYIADLGIYRIRKILRNGN-IVTIAGTGEEGFSGDGG---PA 148

Query: 656 FNRPQGLAYN---AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
            N      +N   ++ N LY  D  N  +R+I   N T+ T+AG G  G    GG    +
Sbjct: 149 INAQISAVWNIALSQNNELYFVDYSNCRIRKI-LRNGTIVTIAGTGEDGFSGDGGLAINA 207

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTS 771
           +L   P  V +   +++VYIA +  +++      +G+    +G G E  + +G  + N  
Sbjct: 208 KL-GYPCSV-FVSKDDEVYIADSQNNRV-RKILRNGIINTIAGTGEEGFSGDGGPATNAQ 264

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGM 830
              P G+ +S    E+Y+ DS +  IR + L+ G    +AG G+  +       GD  G 
Sbjct: 265 LNVPCGVFVSAT-NEVYIVDSGNCRIRKI-LRNGIINTIAGTGEEGYS------GD-GGP 315

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
                + +   ++ ++N ++Y+AD+ NH+I+K+      + T+AG G+ GF
Sbjct: 316 AINAQISNVYNIFVSQNDEVYIADTNNHRIRKI-LKDGTIETIAGNGEKGF 365



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA--AL 887
           M ++ +L  P+ V+ A N +IY+AD  NH+++K+      V T+AG    GF      A 
Sbjct: 35  MATDAMLNCPVEVFVAPNDEIYIADRDNHRVRKILKDGTMV-TIAGWSFGGFGGDGGPAT 93

Query: 888 AAQLSEPAGIIEAQNGNLFIAD 909
           +A L  P  I  + +  ++IAD
Sbjct: 94  SAMLDFPTSIAVSSDNEVYIAD 115


>gi|421503599|ref|ZP_15950546.1| transmembrane protein [Pseudomonas mendocina DLHK]
 gi|400345687|gb|EJO94050.1| transmembrane protein [Pseudomonas mendocina DLHK]
          Length = 404

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           P       WLN   L    DL+GKVV++DFWTY CINC + LP +    ++Y D  F V+
Sbjct: 258 PTLAGATQWLNGPALDLA-DLRGKVVLVDFWTYDCINCRNSLPYVNQWAQRYADQGFVVI 316

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E+ ++ +R A  R GI HPV  D    +W     + WP    +  +G++  
Sbjct: 317 GVHTPEYAYERIVDNVRQATKRLGIQHPVAIDNQYRVWNAFDNHYWPAHYFIDASGRVRY 376

Query: 551 QLAGEGHRKDLDDLVEAAL 569
              GEG  +  + +++  L
Sbjct: 377 LHIGEGGYERQEAVIQQLL 395


>gi|120597364|ref|YP_961938.1| 2-deoxyglucose-6-phosphatase [Shewanella sp. W3-18-1]
 gi|146294496|ref|YP_001184920.1| 2-deoxyglucose-6-phosphatase [Shewanella putrefaciens CN-32]
 gi|386315235|ref|YP_006011400.1| HAD-superfamily hydrolase [Shewanella putrefaciens 200]
 gi|120557457|gb|ABM23384.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Shewanella sp.
           W3-18-1]
 gi|145566186|gb|ABP77121.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Shewanella
           putrefaciens CN-32]
 gi|319427860|gb|ADV55934.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Shewanella
           putrefaciens 200]
          Length = 217

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 11/220 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGVL +SE   +R   DV + +GV VT+E      G      +         
Sbjct: 6   IQAVIFDMDGVLIDSEPLWQRIEYDVLSALGVPVTIETIQQTTGLRIDQCVDYWYHKAPW 65

Query: 139 KGFDSEAAKKRFFEIYLDKYAKP--NSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
             +D+    K      +DK A+    +G   PG  + I  C++KGLK+ +A+S+    +D
Sbjct: 66  ADYDNTKVSKAI----VDKVAEEIRQTGEPMPGVQQAIAYCQAKGLKIGLATSSPTALID 121

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
           A LA   L  S F A+ SA+A    KP P+++L+ +  L V    C+ IED+  G+ AA+
Sbjct: 122 AVLARLKLK-SQFMAVESAEALTYGKPHPEVYLNCATALGVDPRYCLAIEDSFNGLIAAR 180

Query: 257 AAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS-LNDIL 295
           AA M+ +A+      E+  EA   +   ++ S+S LN +L
Sbjct: 181 AANMQTVAIPAL---EQRGEAKWIIAHHQLESLSELNKVL 217


>gi|375087274|ref|ZP_09733655.1| HAD hydrolase, family IA [Megamonas funiformis YIT 11815]
 gi|374561848|gb|EHR33186.1| HAD hydrolase, family IA [Megamonas funiformis YIT 11815]
          Length = 216

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 2/186 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ +SE       +      G+  ++ED + ++G     F    A     
Sbjct: 1   MKAVIFDMDGVIIDSESIHADMKIRTLTHFGIPCSMEDCVAYVGRSAKAFFTDFAKFATT 60

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
                E    +   IYL+   + NS     G L+L+ Q  S+G+ VA+ASSADR  ++A 
Sbjct: 61  PVSIQEMVDYKH-RIYLEYIQESNSIYPIDGVLDLLYQLHSEGIPVALASSADRKVINAV 119

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           L   GL +  F+ I+S       KP P I+   +K L    ++C+VIEDA AG+ AAK A
Sbjct: 120 LIKFGL-MDCFEYILSGAELPASKPNPAIYQLTAKALGFAPADCVVIEDATAGIMAAKDA 178

Query: 259 QMRCIA 264
              CIA
Sbjct: 179 GAYCIA 184


>gi|421910335|ref|ZP_16340122.1| FIG00731668: hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae ST258-K26BO]
 gi|421914892|ref|ZP_16344519.1| FIG00731668: hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae ST258-K28BO]
 gi|410115758|emb|CCM82747.1| FIG00731668: hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae ST258-K26BO]
 gi|410122808|emb|CCM87144.1| FIG00731668: hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae ST258-K28BO]
          Length = 144

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N+  L   R LKGKVV++DFWT  CINC H LP +     KY+     V
Sbjct: 1   MPSLAGGSAWINSPALTPER-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVV 59

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ L  +R AV  + I++PVV D +  +W   G   WP   +    G+L 
Sbjct: 60  IGVHTPEYPWERSLPLLRQAVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLR 119

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 120 YTAFGEGDYARQEQVIQQLL 139


>gi|182414669|ref|YP_001819735.1| SMP-30/gluconolaconase/LRE domain-containing protein [Opitutus
           terrae PB90-1]
 gi|177841883|gb|ACB76135.1| SMP-30/Gluconolaconase/LRE domain protein [Opitutus terrae PB90-1]
          Length = 1292

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 146/317 (46%), Gaps = 64/317 (20%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQG 706
           DG+  DA FN P+G+A +A   + YVADT NH +R++   +  V TLAG+ G  G+    
Sbjct: 209 DGAGSDARFNGPKGIAVDANGTV-YVADTSNHIIRKVT-PSGVVTTLAGSPGISGNSDGA 266

Query: 707 GEKGTSQLLNSPWDVCY----------------KPINEKVYIAMAGQ------------- 737
           G+   +   N+P D+                  K   E V  ++A               
Sbjct: 267 GD---AARFNAPTDIAVDDAGTIYVVDQSGSLRKITPEGVVTSLASGFSYPRGVAFDRSS 323

Query: 738 ---------HQIWEHSTVDGVTRAFSG-DGYERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
                    H + +  T +G    F+G D   R+ +G   LN  F  P G++++ D   +
Sbjct: 324 GVFFVADTGHHVIKRVTPNGSVTVFAGADVLVRSADGVG-LNAQFTSPRGLTVAAD-GTV 381

Query: 788 YVADSESSSIR----ALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
           +VADS +  IR     L + T    L+    PI+          DG GS     +P G+ 
Sbjct: 382 FVADSNAYVIRKVTPGLLVTTWAGSLV---RPIYQT-------VDGQGSNAGFGNPTGIA 431

Query: 844 CAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQN 902
               G ++VAD +   I+K+D A+  VST+AG  G  G  DG   AA+ + P G+   Q+
Sbjct: 432 VDAAGNLFVAD-FKATIRKID-ATGYVSTVAGAHGLDGSLDGEKTAARFNAPHGLAVDQH 489

Query: 903 GNLFIADTNNNIIRYLD 919
           GNL++ADT N+ IR +D
Sbjct: 490 GNLYVADTFNHSIRKID 506



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 152/330 (46%), Gaps = 39/330 (11%)

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRD 648
           FTSP      +A D     +F++DSN   I       +VT   G+ +  I  +      D
Sbjct: 367 FTSPRGL--TVAAD---GTVFVADSNAYVIRKVTPGLLVTTWAGSLVRPIYQT-----VD 416

Query: 649 GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGSDYQGG 707
           G   +A F  P G+A +A  NL +VAD +   +R+ID     V T+AG +G  GS    G
Sbjct: 417 GQGSNAGFGNPTGIAVDAAGNL-FVADFK-ATIRKID-ATGYVSTVAGAHGLDGS--LDG 471

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767
           EK T+   N+P  +     +  +Y+A    H I +      VT  +   G E  ++G  +
Sbjct: 472 EK-TAARFNAPHGLAVDQ-HGNLYVADTFNHSIRKIDAAGQVTTPYGVSGVEGTVDGIGN 529

Query: 768 LNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
               F  P+ ++   D   ++VAD     +R ++ + G    +AG            G  
Sbjct: 530 A-ARFGSPTALAFDRD-GSLFVADGHR--VRRISPE-GVVTTVAG-------TANATGSI 577

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAA 886
           DG+G+        G+   + G ++VA++  H I+++ P    V T+ G+ G  G  DG  
Sbjct: 578 DGVGAAATFGEIKGLAVDRAGNVFVAENTTHVIRRITP-DGTVVTIGGLAGSIGTADGVG 636

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            AA+ +EP G+   + G+L+I D+ NN IR
Sbjct: 637 SAARFNEPWGLALDRFGHLYIVDSGNNTIR 666



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 50/340 (14%)

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT 655
             S   +P  +A D  +   F++D+ H+ I     +G+  V  G+       DG   +A 
Sbjct: 307 LASGFSYPRGVAFDRSSGVFFVADTGHHVIKRVTPNGSVTVFAGADVLVRSADGVGLNAQ 366

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREI-----------DFVNDTVRTLAGNGTK---G 701
           F  P+GL   A    ++VAD+  + +R++             V    +T+ G G+    G
Sbjct: 367 FTSPRGLTV-AADGTVFVADSNAYVIRKVTPGLLVTTWAGSLVRPIYQTVDGQGSNAGFG 425

Query: 702 SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIA-MAGQHQIWEHSTVDGVTRAFSGDGYER 760
           +           L  + +    + I+   Y++ +AG H                  G + 
Sbjct: 426 NPTGIAVDAAGNLFVADFKATIRKIDATGYVSTVAGAH------------------GLDG 467

Query: 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN 820
           +L+G  +    F  P G+++      +YVAD+ + SIR ++         A G    P  
Sbjct: 468 SLDGEKTA-ARFNAPHGLAVD-QHGNLYVADTFNHSIRKID---------AAGQVTTPYG 516

Query: 821 LFKF-GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA 879
           +    G  DG+G+      P  +   ++G ++VAD   H+++++ P    V+T+AG   A
Sbjct: 517 VSGVEGTVDGIGNAARFGSPTALAFDRDGSLFVAD--GHRVRRISP-EGVVTTVAGTANA 573

Query: 880 -GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            G  DG   AA   E  G+   + GN+F+A+   ++IR +
Sbjct: 574 TGSIDGVGAAATFGEIKGLAVDRAGNVFVAENTTHVIRRI 613



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 29/265 (10%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D   N LF++D     I   D  G      G+ G +G  DG    A FN P GL
Sbjct: 427 PTGIAVDAAGN-LFVADFKAT-IRKIDATGYVSTVAGAHGLDGSLDGEKTAARFNAPHGL 484

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           A +   NL YVADT NH++R+ID           +G +G+   G   G +    SP  + 
Sbjct: 485 AVDQHGNL-YVADTFNHSIRKIDAAGQVTTPYGVSGVEGT-VDG--IGNAARFGSPTALA 540

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
           +   +    + +A  H++   S  +GV    +G               +F +  G+++  
Sbjct: 541 F---DRDGSLFVADGHRVRRISP-EGVVTTVAGTANATGSIDGVGAAATFGEIKGLAVD- 595

Query: 783 DFMEIYVADSESSSIRALN-----LKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
               ++VA++ +  IR +      +  GG   LAG            G  DG+GS     
Sbjct: 596 RAGNVFVAENTTHVIRRITPDGTVVTIGG---LAG----------SIGTADGVGSAARFN 642

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKK 862
            P G+   + G +Y+ DS N+ I+K
Sbjct: 643 EPWGLALDRFGHLYIVDSGNNTIRK 667



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 121/292 (41%), Gaps = 43/292 (14%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
           G  DG    A F+ P GLA +A  NL YV D   + +R+I     +V T AG  T     
Sbjct: 43  GYVDGEGTQARFHEPAGLACDADGNL-YVVDPGTNLIRKITPAA-SVSTFAGTPTGWGLV 100

Query: 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG------DGY 758
            G     S     P  V     +  VYIA  G   I    T DG  R  +G      DGY
Sbjct: 101 DG--PAASARFGLPQGVAVGA-DGTVYIADTGNAAI-RIITPDGSVRILAGGRSGSQDGY 156

Query: 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRAL---NLKTGGSRLLAGGDP 815
                       +F  P           +YVADS ++++R +   N+ T      A    
Sbjct: 157 --------GTGATFNLPE-AVAVNAAGVVYVADSGNNTVRRIEEGNVTTLAGLAGASAGA 207

Query: 816 IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
           +           DG GS+     P G+    NG +YVAD+ NH I+K+ P S  V+TLAG
Sbjct: 208 V-----------DGAGSDARFNGPKGIAVDANGTVYVADTSNHIIRKVTP-SGVVTTLAG 255

Query: 876 I-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPE 926
             G +G  DGA  AA+ + P  I     G +++ D + +      L K  PE
Sbjct: 256 SPGISGNSDGAGDAARFNAPTDIAVDDAGTIYVVDQSGS------LRKITPE 301


>gi|428183007|gb|EKX51866.1| hypothetical protein GUITHDRAFT_84912 [Guillardia theta CCMP2712]
          Length = 351

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 15/210 (7%)

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           FN P GLA +     LYV D +NH +R++   + +  TLAG GT G  +  G+  +S   
Sbjct: 26  FNCPYGLALSPDDLWLYVGDRDNHRIRKVSMRDGSTTTLAGTGTPG--FADGDWNSSS-F 82

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
           N P  V   P  + +Y+A +G +++ + +T  G T    G G   + +G ++   S + P
Sbjct: 83  NQPCGVSTSPDGQWLYVADSGNNRVRKVNTTSGATLTLVGKGDLGSADGEAA-TVSLSTP 141

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEV 834
             ++ SPD   +Y+ADS S  IR + L  G +R LAG G+  F          DG  SE 
Sbjct: 142 LSVAASPDGRYLYIADSLSQRIRQVRLADGWTRTLAGSGNQSF---------SDGPPSES 192

Query: 835 LLQHPLGVYCAKNG-QIYVADSYNHKIKKL 863
               P  +  + +G  +YVAD  N +++K+
Sbjct: 193 SFNTPAAIAVSPDGLTVYVADLNNERVRKI 222



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 4/201 (1%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  LA+   +  L++ D +++RI    +       +  +G  G  DG ++ ++FN+P G+
Sbjct: 29  PYGLALSPDDLWLYVGDRDNHRIRKVSMRDGSTTTLAGTGTPGFADGDWNSSSFNQPCGV 88

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
           + +     LYVAD+ N+ +R+++  +    TL G G  GS    GE  T   L++P  V 
Sbjct: 89  STSPDGQWLYVADSGNNRVRKVNTTSGATLTLVGKGDLGS--ADGEAATVS-LSTPLSVA 145

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
             P    +YIA +   +I +    DG TR  +G G +   +G  S  +SF  P+ I++SP
Sbjct: 146 ASPDGRYLYIADSLSQRIRQVRLADGWTRTLAGSGNQSFSDGPPS-ESSFNTPAAIAVSP 204

Query: 783 DFMEIYVADSESSSIRALNLK 803
           D + +YVAD  +  +R + ++
Sbjct: 205 DGLTVYVADLNNERVRKIAVR 225



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 23/206 (11%)

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGM 830
           F  P G++LSPD + +YV D ++  IR ++++ G +  LAG G P F D         G 
Sbjct: 26  FNCPYGLALSPDDLWLYVGDRDNHRIRKVSMRDGSTTTLAGTGTPGFAD---------GD 76

Query: 831 GSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA 889
            +      P GV  + +GQ +YVADS N++++K++  S    TL G G  G  DG A   
Sbjct: 77  WNSSSFNQPCGVSTSPDGQWLYVADSGNNRVRKVNTTSGATLTLVGKGDLGSADGEAATV 136

Query: 890 QLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLELKGVQ-----PPTPKS- 942
            LS P  +  + +G  L+IAD+ +  IR + L   +   +TL   G Q     PP+  S 
Sbjct: 137 SLSTPLSVAASPDGRYLYIADSLSQRIRQVRL--ADGWTRTLAGSGNQSFSDGPPSESSF 194

Query: 943 RSPKRLRRRSSPDAQTIVVDGGLSNE 968
            +P  +    SPD  T+ V   L+NE
Sbjct: 195 NTPAAI--AVSPDGLTVYV-ADLNNE 217



 Score = 47.0 bits (110), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 71/193 (36%), Gaps = 23/193 (11%)

Query: 500 EKDLEAIRNAVLR-------YGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL-AQ 551
           ++D   IR   +R        G   P   DGD   W     N  P      P+G+ L   
Sbjct: 45  DRDNHRIRKVSMRDGSTTTLAGTGTPGFADGD---WNSSSFNQ-PCGVSTSPDGQWLYVA 100

Query: 552 LAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDIL 611
            +G    + ++    A L   GK  L              D    T  L  P  +A    
Sbjct: 101 DSGNNRVRKVNTTSGATLTLVGKGDL-----------GSADGEAATVSLSTPLSVAASPD 149

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
              L+I+DS   RI    L   +   +  SG +   DG   +++FN P  +A +     +
Sbjct: 150 GRYLYIADSLSQRIRQVRLADGWTRTLAGSGNQSFSDGPPSESSFNTPAAIAVSPDGLTV 209

Query: 672 YVADTENHALREI 684
           YVAD  N  +R+I
Sbjct: 210 YVADLNNERVRKI 222


>gi|206579447|ref|YP_002238381.1| cytochrome c biogenesis protein/redoxin [Klebsiella pneumoniae 342]
 gi|290509410|ref|ZP_06548781.1| cytochrome c biogenesis protein/redoxin [Klebsiella sp. 1_1_55]
 gi|206568505|gb|ACI10281.1| cytochrome c biogenesis protein/redoxin [Klebsiella pneumoniae 342]
 gi|289778804|gb|EFD86801.1| cytochrome c biogenesis protein/redoxin [Klebsiella sp. 1_1_55]
          Length = 396

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E +    PI        +P       WLN+  L   
Sbjct: 213 YLQSAGGWSQALE-QRLAARLPQPEQKTILQPIAAPQPSSAMPSLAGGSAWLNSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV    I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDGRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|425081619|ref|ZP_18484716.1| hypothetical protein HMPREF1306_02367 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW2]
 gi|428937326|ref|ZP_19010626.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           JHCK1]
 gi|405603049|gb|EKB76172.1| hypothetical protein HMPREF1306_02367 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW2]
 gi|426296500|gb|EKV59124.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           JHCK1]
          Length = 396

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 213 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKG VV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGNVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|307151265|ref|YP_003886649.1| redoxin domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306981493|gb|ADN13374.1| Redoxin domain protein [Cyanothece sp. PCC 7822]
          Length = 208

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P+F    +WLN+ PL    DLKG V+++ FWT+ CINC   +P +     +YK     V
Sbjct: 69  LPDFQGITEWLNSKPLTIA-DLKGNVILIQFWTFACINCQRTIPYIVRWHNQYKTKGLKV 127

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E++L+ IR A+ +  IS+ V  D D   W       WP   +    G + 
Sbjct: 128 IGVHTPEFAYERELKNIRRAMEQRQISYAVAVDNDYKTWNAYSNQYWPHLFLADRQGLIC 187

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  ++ + ++   L
Sbjct: 188 YDHIGEGAYQETEQMIRKLL 207


>gi|182414082|ref|YP_001819148.1| NHL repeat-containing protein [Opitutus terrae PB90-1]
 gi|177841296|gb|ACB75548.1| NHL repeat containing protein [Opitutus terrae PB90-1]
          Length = 963

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 159/351 (45%), Gaps = 31/351 (8%)

Query: 576 KLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFI 635
            LL   P    L+       FT+P       A+D   N LF++D+ ++ I      G   
Sbjct: 42  SLLAGRPFFGGLDGQGRAAGFTTP----SSAAVDQAGN-LFVADTTNHTIRKITPSGTVS 96

Query: 636 VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA 695
              G  G+ G  DG+ + A F  P G+A +   N LYVAD+ N+ +R+I      V TLA
Sbjct: 97  TFAGMGGQPGSVDGTGNAARFLSPHGVALDEAGN-LYVADSGNNTIRKIT-PTGVVSTLA 154

Query: 696 GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG 755
           G             G++   N P  V   P +  +++A   Q+ +    T  G    F+G
Sbjct: 155 GQAGAAGSAD--GDGSAARFNHPTGVTAYP-DGTLFVADT-QNHVIRTITPAGRVSTFAG 210

Query: 756 -DGYERNLNGSSSLNTS-FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG 813
             G   N NG  +++T+ FA P  I++      +YV + ES++IR +     G  L   G
Sbjct: 211 KTGIRGNTNG--TVDTALFALPRNIAVFRG--NLYVTEQESAAIRWITPT--GVVLTLAG 264

Query: 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPAS-----N 868
           DP         G  DG G +     P G+   ++G I+VADS N+ I+++ P +      
Sbjct: 265 DPDL------VGSADGTGGDARFSSPAGLAVDRDGNIFVADSLNNTIRRVTPLNGPAPLG 318

Query: 869 RVSTLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            V+T+AG  G  G  DG    A+ + P GI     GN+F+AD  N  IR +
Sbjct: 319 VVTTVAGQAGVTGSADGVGSQARFNLPYGIAVDAAGNIFVADLGNTTIRKI 369



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 154/363 (42%), Gaps = 53/363 (14%)

Query: 571 FYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDL 630
           F GK  +  NT          D  LF  P        I +    L++++     I     
Sbjct: 208 FAGKTGIRGNT------NGTVDTALFALPRN------IAVFRGNLYVTEQESAAIRWITP 255

Query: 631 DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND- 689
            G  +   G     G  DG+  DA F+ P GLA +   N+ +VAD+ N+ +R +  +N  
Sbjct: 256 TGVVLTLAGDPDLVGSADGTGGDARFSSPAGLAVDRDGNI-FVADSLNNTIRRVTPLNGP 314

Query: 690 ----TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
                V T+AG         G   G+    N P+ +        +++A  G   I     
Sbjct: 315 APLGVVTTVAGQAGVTGSADG--VGSQARFNLPYGIAVDAAGN-IFVADLGNTTI----- 366

Query: 746 VDGVTRAFSGDGYERNLNGSSSLNTS--------FAQPSGISLSPDFM-EIYVADSESSS 796
                R  +  G    L G +S+ T+        F  P+G+++  D     YVAD+ +++
Sbjct: 367 -----RKIAPSGAVTTLAGEASVGTADGPGPMARFNYPNGVAV--DLAGNTYVADTFNAT 419

Query: 797 IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
           IR +    G    LAG          + G  DG GS    + PLG+   + G +Y   + 
Sbjct: 420 IRKIT-PAGVVSTLAGA-------AGQIGSADGTGSAARFEFPLGIAVDRAGNVYTT-AN 470

Query: 857 NHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNII 915
           +  ++K+ PA   V+T+AG+ G  G  DG  LAA+ + P G+  A +G L++AD  N+ I
Sbjct: 471 SATVRKITPA-GVVTTIAGVSGNFGSADGPGLAARFAFPNGLAVATDGTLYVADEENSTI 529

Query: 916 RYL 918
           R +
Sbjct: 530 RQI 532



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 136/316 (43%), Gaps = 20/316 (6%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
              P  +A+D   N +F++D  +  I      G  +  +      G  DG    A FN P
Sbjct: 342 FNLPYGIAVDAAGN-IFVADLGNTTIRKIAPSGA-VTTLAGEASVGTADGPGPMARFNYP 399

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
            G+A +   N  YVADT N  +R+I      V TLAG   +     G   G++     P 
Sbjct: 400 NGVAVDLAGNT-YVADTFNATIRKITPAG-VVSTLAGAAGQIGSADG--TGSAARFEFPL 455

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
            +    ++    +            T  GV    +G            L   FA P+G++
Sbjct: 456 GIA---VDRAGNVYTTANSATVRKITPAGVVTTIAGVSGNFGSADGPGLAARFAFPNGLA 512

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           ++ D   +YVAD E+S+IR +    G    LAG       +  + G  DG G+      P
Sbjct: 513 VATD-GTLYVADEENSTIRQIT-PDGMVSTLAG-------SPAQRGGIDGTGTAARFVQP 563

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGII 898
            G+     G +YV+D  +  ++K+ PA   V+T+AG  G AG  DG   AAQ +   GI 
Sbjct: 564 AGLTIDAAGNLYVSDRGDFTVRKITPA-GEVTTVAGQHGIAGGADGTGSAAQFAYAGGIA 622

Query: 899 EAQNGNLFIADTNNNI 914
             + G L++AD+NN I
Sbjct: 623 IDRRGTLYVADSNNRI 638



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 153/353 (43%), Gaps = 34/353 (9%)

Query: 581 TPLPLSLEKDNDPRLFTSP--------LKFPGKLAIDILNNRLFISDSNHNRIV-VTDLD 631
           TP  + L    DP L  S            P  LA+D   N +F++DS +N I  VT L+
Sbjct: 254 TPTGVVLTLAGDPDLVGSADGTGGDARFSSPAGLAVDRDGN-IFVADSLNNTIRRVTPLN 312

Query: 632 GNFIVQI-----GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDF 686
           G   + +     G +G  G  DG    A FN P G+A +A  N+ +VAD  N  +R+I  
Sbjct: 313 GPAPLGVVTTVAGQAGVTGSADGVGSQARFNLPYGIAVDAAGNI-FVADLGNTTIRKIA- 370

Query: 687 VNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
            +  V TLAG  + G+       G     N P  V    +    Y+A      I + +  
Sbjct: 371 PSGAVTTLAGEASVGT---ADGPGPMARFNYPNGVAVD-LAGNTYVADTFNATIRKITPA 426

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
             V+      G   + +G+ S    F  P GI++  D        + S+++R +    G 
Sbjct: 427 GVVSTLAGAAGQIGSADGTGSA-ARFEFPLGIAV--DRAGNVYTTANSATVRKIT-PAGV 482

Query: 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
              +AG           FG  DG G       P G+  A +G +YVAD  N  I+++ P 
Sbjct: 483 VTTIAGVSG-------NFGSADGPGLAARFAFPNGLAVATDGTLYVADEENSTIRQITP- 534

Query: 867 SNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
              VSTLAG   + G  DG   AA+  +PAG+     GNL+++D  +  +R +
Sbjct: 535 DGMVSTLAGSPAQRGGIDGTGTAARFVQPAGLTIDAAGNLYVSDRGDFTVRKI 587


>gi|288935360|ref|YP_003439419.1| cytochrome C biogenesis protein transmembrane region [Klebsiella
           variicola At-22]
 gi|288890069|gb|ADC58387.1| cytochrome c biogenesis protein transmembrane region [Klebsiella
           variicola At-22]
          Length = 396

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E +    PI        +P       WLN+  L   
Sbjct: 213 YLQSAGGWSQALE-QRLAARLPQPEQKTILQPIAAPQPSSAMPSLAGGSAWLNSPALTPE 271

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R LKGKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 272 R-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 330

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV    I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 331 AVKDGRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 390

Query: 569 L 569
           L
Sbjct: 391 L 391


>gi|290976488|ref|XP_002670972.1| predicted protein [Naegleria gruberi]
 gi|284084536|gb|EFC38228.1| predicted protein [Naegleria gruberi]
          Length = 704

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 39/268 (14%)

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKG---SDYQGGE-KGTSQLLNSPWDVCYKPINE 728
           +ADT NH L+ I   N ++ TL G G KG   S   GG+ K     LN P  +       
Sbjct: 73  IADTGNHQLKFI-HSNGSLLTLCGTGEKGFAESPLVGGKFKARYSKLNEPRQITMSTTEN 131

Query: 729 KVYIAMAGQHQIWEHSTVDG--------VTRAFSGDG---YERNLNGSSSLNTSFAQPSG 777
            +YIA +G + I + + + G        +T  FSGDG    +  LNG          P G
Sbjct: 132 ALYIAESGNNIIRKLNLMTGQLVIVAGNLTAGFSGDGKIATQAMLNG----------PRG 181

Query: 778 ISLSPDFME-IYVADSESSSIRALNLKTGGSRLLAG--GDPIFPDNLFKFGDRDGMGSEV 834
           ++      + +Y++D+ +  +R L++ TG    +AG  G   F DN+        + +  
Sbjct: 182 VTFDTTTQKYLYISDTLNHIVRKLDIFTGIITTIAGTAGSSGFTDNV--------LSTSA 233

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AALAAQLS 892
            L  P  V    NG IY+AD+ N++I+K+  A+  +ST+ G G  G   DG AA +A ++
Sbjct: 234 KLNGPQAVAIMSNGDIYIADTQNNRIRKITAATGIISTICGTGNGGIAGDGSAATSAMIN 293

Query: 893 EPAGIIEAQNGNLFIADTNNNIIRYLDL 920
            P  +      +L+IAD+ N+ +R +DL
Sbjct: 294 SPRDLFLGLQNDLYIADSWNHRLRRIDL 321



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 154/320 (48%), Gaps = 33/320 (10%)

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEG-----LRDGSFDD--ATFNRPQGLAYNA 666
           R+ I+D+ ++++     +G+ +   G+ GE+G     L  G F    +  N P+ +  + 
Sbjct: 70  RVLIADTGNHQLKFIHSNGSLLTLCGT-GEKGFAESPLVGGKFKARYSKLNEPRQITMST 128

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYKP 725
            +N LY+A++ N+ +R+++ +   +  +AGN T G  + G G+  T  +LN P  V +  
Sbjct: 129 TENALYIAESGNNIIRKLNLMTGQLVIVAGNLTAG--FSGDGKIATQAMLNGPRGVTFDT 186

Query: 726 INEK-VYIAMAGQHQIWEHSTVDGVTRAFSG----DGYERN-LNGSSSLNTSFAQPSGIS 779
             +K +YI+    H + +     G+    +G     G+  N L+ S+ LN     P  ++
Sbjct: 187 TTQKYLYISDTLNHIVRKLDIFTGIITTIAGTAGSSGFTDNVLSTSAKLN----GPQAVA 242

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839
           +  +  +IY+AD++++ IR +   TG    + G       N    GD     +  ++  P
Sbjct: 243 IMSN-GDIYIADTQNNRIRKITAATGIISTICG-----TGNGGIAGDGSA-ATSAMINSP 295

Query: 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899
             ++      +Y+ADS+NH+++++D  +  + T++G       +  ++   LS+P     
Sbjct: 296 RDLFLGLQNDLYIADSWNHRLRRIDLRTGIIQTVSGTTIMSGPESVSINI-LSKPG---- 350

Query: 900 AQNGNLFIADTNNNIIRYLD 919
             +  + + DTNN  I  ++
Sbjct: 351 VSSMAITVTDTNNQRILMME 370



 Score = 47.4 bits (111), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG------ 884
           G+   L  P GV  +   ++ +AD+ NH++K +  ++  + TL G G+ GF +       
Sbjct: 52  GNNYALVWPAGVRVSNYSRVLIADTGNHQLKFIH-SNGSLLTLCGTGEKGFAESPLVGGK 110

Query: 885 -AALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
             A  ++L+EP  I  +   N L+IA++ NNIIR L+L
Sbjct: 111 FKARYSKLNEPRQITMSTTENALYIAESGNNIIRKLNL 148


>gi|452209279|ref|YP_007489393.1| Beta-phosphoglucomutase [Methanosarcina mazei Tuc01]
 gi|452099181|gb|AGF96121.1| Beta-phosphoglucomutase [Methanosarcina mazei Tuc01]
          Length = 231

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 9/201 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVA--SVK 136
           + A++FDMDGVL +S      A    F EMG+E+  ED     G+   N L  +   + K
Sbjct: 2   LKALIFDMDGVLVDSMPFHAAAWKKAFLEMGMEIQDEDIYAIEGSNPRNGLPLLIRKARK 61

Query: 137 GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
             + FD EA       IY  ++ +      F G  E +   KS+ L ++V S +DR+ V 
Sbjct: 62  EPEDFDFEAITS----IYRQEFNRIFKLKAFDGMKECLEFLKSRFL-LSVVSGSDRLIV- 115

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
            N     L   +FD +V+ D   N KP PD FL A ++LNV   EC+VIE+A+ GV+AAK
Sbjct: 116 -NGIVDQLFPGIFDTVVTGDDVLNSKPDPDPFLKAVELLNVGKEECVVIENAVLGVEAAK 174

Query: 257 AAQMRCIAVTTTLSEERLKEA 277
            A + CI V T +    L  A
Sbjct: 175 KADIYCIGVPTYVKPSELDRA 195


>gi|296102330|ref|YP_003612476.1| putative cytochrome c biogenesis protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295056789|gb|ADF61527.1| putative cytochrome c biogenesis protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 396

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +    KKY+     V
Sbjct: 253 LPSLSGGTGWVNGDPVT-SDSLRGKVVLIDFWTWDCINCQHTLPHVRDWAKKYQAQGLVV 311

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L +++ AV ++ + + VV D +  +W   G   WP        G+L 
Sbjct: 312 IGVHTPEYPWEKPLASVQKAVTKWQLPYRVVTDNNYKIWNTFGNQYWPAHYYFDAKGQLR 371

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 372 YTSFGEGNYDQQEKVIQQLL 391


>gi|358458536|ref|ZP_09168745.1| NHL repeat containing protein [Frankia sp. CN3]
 gi|357078265|gb|EHI87715.1| NHL repeat containing protein [Frankia sp. CN3]
          Length = 674

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 39/328 (11%)

Query: 599 PLKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRDGSF 651
           P   P  +A+   +  ++ +D++H+R+       VV+D  G  +      G   +R    
Sbjct: 346 PYGTPAGVAV-AADGTVYFTDTHHDRVKKIDKAGVVSDFAGTGVSTFSGDGGPAIR---- 400

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG- 710
             A    P G+A       +Y+ D  N  +R+ID  + T+RT+AG GT   D  G   G 
Sbjct: 401 --AQVGFPNGVAVT-DDGTVYIDDNHNDRIRKID-PSGTIRTIAGIGT--GDGHGTFSGD 454

Query: 711 ----TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE----RNL 762
               T   LNSP  +     +  VYIA    +++ +     G     +G G       + 
Sbjct: 455 NSAATKAGLNSPQGIAVT-SDGTVYIADTANNRVRKIDPSSGTITTVAGTGASTGSVSDD 513

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
           +G  +     + P+ +++ P    +Y+ D+    IR ++ +   + +   G+P       
Sbjct: 514 DGGLATQADLSAPADVAVGPGGA-LYIVDTGHDRIRKVDAQGRITTVAGTGEPGL----- 567

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK 882
             GD   +  E  L +PLGV  A +G +Y+A+ + + I+K+DP S ++ST AG G  GF 
Sbjct: 568 -AGDGR-LAVETQLDNPLGVAVAADGTLYIAEYHGNHIRKVDP-SGKISTFAGTGDWGFS 624

Query: 883 DGAALAAQ--LSEPAGIIEAQNGNLFIA 908
               LAA+  L+ P G+    +G+L+IA
Sbjct: 625 GDGGLAAEAKLNGPVGVDVGPDGSLYIA 652



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 10/178 (5%)

Query: 748 GVTRAFSGDGYER-NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
           GV   F+G G    + +G  ++      P+G++++ D   +Y+ D+ +  IR ++  +G 
Sbjct: 378 GVVSDFAGTGVSTFSGDGGPAIRAQVGFPNGVAVTDDGT-VYIDDNHNDRIRKID-PSGT 435

Query: 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
            R +AG      D    F   +   ++  L  P G+    +G +Y+AD+ N++++K+DP+
Sbjct: 436 IRTIAGIG--TGDGHGTFSGDNSAATKAGLNSPQGIAVTSDGTVYIADTANNRVRKIDPS 493

Query: 867 SNRVSTLAGIGKAGFK-----DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           S  ++T+AG G +         G A  A LS PA +     G L+I DT ++ IR +D
Sbjct: 494 SGTITTVAGTGASTGSVSDDDGGLATQADLSAPADVAVGPGGALYIVDTGHDRIRKVD 551


>gi|295838824|ref|ZP_06825757.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197695372|gb|EDY42305.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 641

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 4/134 (2%)

Query: 439 WLNT---APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSA 495
           W NT   AP+  +R  +GKVV++DFWTY CINC   LP ++  +K YKD    ++GVHS 
Sbjct: 357 WFNTPDGAPVDLKRQ-RGKVVLVDFWTYSCINCQRSLPHIKEWQKAYKDAGLEIIGVHSP 415

Query: 496 KFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGE 555
           +F  EK  + + +   + G+++PV  D  +  W       WP   ++  +G +     GE
Sbjct: 416 EFGFEKKADNVVSQAKKLGVTYPVALDNKLTTWNNYRNRFWPAKYLIDAHGTVRYFKFGE 475

Query: 556 GHRKDLDDLVEAAL 569
           G     +DL+   L
Sbjct: 476 GQYAQTEDLIRELL 489


>gi|381199544|ref|ZP_09906691.1| thioredoxin-like protein [Sphingobium yanoikuyae XLDN2-5]
          Length = 356

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           WL   P      L+GKVV+++FWTY CIN +  LP L   +++Y D    VVGVH+ +F 
Sbjct: 50  WLTPVPGGVA-SLRGKVVLVNFWTYSCINSLRALPYLRAWQERYGDKGLVVVGVHAPEFR 108

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            E D   +R A  R G+ +P + D D  +W+  G   WP F  +   G++     GEG  
Sbjct: 109 FEHDPAKVRQATARLGVGYPNLQDNDYAVWQAFGNQGWPGFYFIDARGQVRGYRVGEGDY 168

Query: 559 KDLDDLVEAAL 569
            + + L+   L
Sbjct: 169 AESEQLIRRLL 179


>gi|315605356|ref|ZP_07880399.1| C-type cytochrome biogenesis protein DipZ [Actinomyces sp. oral
           taxon 180 str. F0310]
 gi|315312925|gb|EFU60999.1| C-type cytochrome biogenesis protein DipZ [Actinomyces sp. oral
           taxon 180 str. F0310]
          Length = 446

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 5/111 (4%)

Query: 438 DWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           +WLN        +  G V ++DFW+  C+NC   +P++E + +KYKD    V+GVHS + 
Sbjct: 314 EWLNA-----LGEPHGTVTLVDFWSSSCVNCAREIPEIERIYEKYKDAGLVVIGVHSPQQ 368

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
            +E+D   +  A  R GI++PV  D D+  ++  G  +WPT  + GP+G+L
Sbjct: 369 AHERDASVVSGAASRLGITYPVALDPDLEAFQAYGATAWPTHYLAGPDGQL 419


>gi|222056335|ref|YP_002538697.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
 gi|221565624|gb|ACM21596.1| NHL repeat containing protein [Geobacter daltonii FRC-32]
          Length = 372

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 25/294 (8%)

Query: 630 LDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND 689
           L G   V  G + + G  DG+   A FN P G+  +     LYVADT N+ +R++     
Sbjct: 46  LTGTVSVLAGQAPQMGTADGTGSAARFNAPSGITTDGTN--LYVADTGNNLIRKVVITTG 103

Query: 690 TVRTLAGN-GTKGSDYQGGEKGTSQL--LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
            V TLAG  GT  +   G   GT      N+P+ +     N  +Y+A    + I +    
Sbjct: 104 AVTTLAGTVGTGTAQTSGSTDGTGSAAKFNAPFAITTDGTN--LYVADTNNNTIRKVVIA 161

Query: 747 DGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
            G     +G  G   + +G       F  P GI  + D   +YV+D+ + +IR + + TG
Sbjct: 162 TGTVTTLAGSVGIPGSADGIGPAGL-FNSPGGI--TTDGTNLYVSDTGNRTIRKVVIATG 218

Query: 806 GSRLLAG--GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
               LAG  G P         G  DG+G   L     G+       ++VAD+ N  I+K+
Sbjct: 219 AVTTLAGSAGTP---------GSTDGVGPSALFGTVFGITTDGT-SLFVADTDNSTIRKI 268

Query: 864 DPASNRVSTLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
             A+  V+TLAG  G +G  DG    A+ + P G I     NL++ D+    IR
Sbjct: 269 VIATGMVTTLAGSAGVSGIADGTGSTAKFNAPFG-ITTDGTNLYVTDSRQGSIR 321



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 145/336 (43%), Gaps = 47/336 (13%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRI--------VVTDLDGNFIVQIGSSGEEGLRDG 649
           S  +F     I      L+++D+ +N I         VT L G   V  G++   G  DG
Sbjct: 68  SAARFNAPSGITTDGTNLYVADTGNNLIRKVVITTGAVTTLAGT--VGTGTAQTSGSTDG 125

Query: 650 SFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGE 708
           +   A FN P   A       LYVADT N+ +R++     TV TLAG+ G  GS    G 
Sbjct: 126 TGSAAKFNAP--FAITTDGTNLYVADTNNNTIRKVVIATGTVTTLAGSVGIPGSADGIGP 183

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD----GYERNLNG 764
            G   L NSP  +     N  +Y++  G   I +     G     +G     G    +  
Sbjct: 184 AG---LFNSPGGITTDGTN--LYVSDTGNRTIRKVVIATGAVTTLAGSAGTPGSTDGVGP 238

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
           S+   T F       ++ D   ++VAD+++S+IR + + TG    LAG   +        
Sbjct: 239 SALFGTVFG------ITTDGTSLFVADTDNSTIRKIVIATGMVTTLAGSAGV-------S 285

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG 884
           G  DG GS      P G+       +YV DS    I+K+  A+  V+TL         +G
Sbjct: 286 GIADGTGSTAKFNAPFGITTDGT-NLYVTDSRQGSIRKVAIATGVVTTLV--------NG 336

Query: 885 AALA--AQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           ++L   + L+ P G I     NL++ADT+N+ I  +
Sbjct: 337 SSLTTISPLNFPLG-ISTDGLNLYVADTDNSTIDLI 371


>gi|42522312|ref|NP_967692.1| hypothetical protein Bd0727 [Bdellovibrio bacteriovorus HD100]
 gi|39574843|emb|CAE78685.1| hypothetical protein with NHL repeat [Bdellovibrio bacteriovorus
           HD100]
          Length = 709

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 156/328 (47%), Gaps = 30/328 (9%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHN---RIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
             +P  + ID  +N L+++D +++   ++  + +  NF    GS G+ G  DG+   A F
Sbjct: 293 FSWPVGITIDSSDN-LYVADYSNSAIRKVTSSAVVSNFA---GSYGDYGAVDGTGTAARF 348

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREID---FVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
             P G+  +A  NL +V D++N ++R++     V     +LAG+    SD      GT+ 
Sbjct: 349 AGPAGVGIDASGNL-FVTDSDNASIRKVTPARVVTLVAGSLAGD----SDGSADGTGTAA 403

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
             +SP  V   P    +Y+A      I + +    VT      G   + +G+ +    F+
Sbjct: 404 SFHSPEGVAADPAGN-LYVADTMNRTIRKITPSGNVTTIAGSPGQIGSADGTGAA-ARFS 461

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            P+ ++++ D   IYVAD      R   L  GG      GD    DN    G  DG G+ 
Sbjct: 462 YPTKLTVAED-GNIYVADE----YRIRKLTPGGVVTSLAGDY---DNS---GSADGTGTS 510

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLS 892
                  G+     G +YV+DS N+ ++K+  A   V+TLAG +G  G  DG    A  S
Sbjct: 511 ARFGGVAGIASDGAGSLYVSDSGNYTVRKVTLA-GVVTTLAGQVGIQGSDDGTGTGATFS 569

Query: 893 EPAGIIEAQNGNLFIADTNNNIIRYLDL 920
             AGI    +GN+F+ADT+NN+IR + +
Sbjct: 570 RVAGITVTPSGNIFVADTDNNVIRKITV 597



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 148/340 (43%), Gaps = 42/340 (12%)

Query: 584 PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRI------VVTDLDGNFIVQ 637
           PLS+ +  +PR            A+      +FI DSN + I      VV+   G F   
Sbjct: 69  PLSIARFREPRD-----------AVVNAAGDIFIVDSNASVIRKISNGVVSTFAGKF--- 114

Query: 638 IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
               G     DG+ D A F+ P G+  +   NL +V +  NH +R+I      V T+AG+
Sbjct: 115 ----GVFDHADGTGDSARFDYPTGITIDGSGNL-FVTEGNNHTIRKITPAA-VVTTVAGS 168

Query: 698 GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
                   G   G++   N+P D+     +   YI     + I +  T  GV   F+GDG
Sbjct: 169 PGNAGTADG--TGSAARFNNPEDITLAA-DGNFYITDKNNNMIRKM-TPAGVVTTFAGDG 224

Query: 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF 817
                +G+ +    F  P+GI +      ++V  S  S+IR +          AG    F
Sbjct: 225 TYGCTDGTGAA-AHFNYPTGI-VGDSAGNLFVVCSSCSTIRKITP--------AGVVTTF 274

Query: 818 PDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-I 876
               +  G  DG G+      P+G+    +  +YVAD  N  I+K+  +S  VS  AG  
Sbjct: 275 AGQAYTTGAVDGTGTAARFSWPVGITIDSSDNLYVADYSNSAIRKV-TSSAVVSNFAGSY 333

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           G  G  DG   AA+ + PAG+    +GNLF+ D++N  IR
Sbjct: 334 GDYGAVDGTGTAARFAGPAGVGIDASGNLFVTDSDNASIR 373



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 145/361 (40%), Gaps = 62/361 (17%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
             +P  + ID   N LF+++ N++ I             GS G  G  DG+   A FN P
Sbjct: 129 FDYPTGITIDGSGN-LFVTEGNNHTIRKITPAAVVTTVAGSPGNAGTADGTGSAARFNNP 187

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           + +   A  N  Y+ D  N+ +R++      V T AG+GT G        G +   N P 
Sbjct: 188 EDITLAADGNF-YITDKNNNMIRKMTPAG-VVTTFAGDGTYGCTDG---TGAAAHFNYPT 242

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
            +        +++  +    I    T  GV   F+G  Y       +     F+ P GI+
Sbjct: 243 GIVGDSAGN-LFVVCSSCSTI-RKITPAGVVTTFAGQAYTTGAVDGTGTAARFSWPVGIT 300

Query: 780 L-SPDFMEIYVADSESSSIRALNLK------------------TGGSRLLAGGDPIFPD- 819
           + S D   +YVAD  +S+IR +                     TG +   AG   +  D 
Sbjct: 301 IDSSD--NLYVADYSNSAIRKVTSSAVVSNFAGSYGDYGAVDGTGTAARFAGPAGVGIDA 358

Query: 820 --NLF----------------------------KFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
             NLF                              G  DG G+      P GV     G 
Sbjct: 359 SGNLFVTDSDNASIRKVTPARVVTLVAGSLAGDSDGSADGTGTAASFHSPEGVAADPAGN 418

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
           +YVAD+ N  I+K+ P+ N V+T+AG  G+ G  DG   AA+ S P  +  A++GN+++A
Sbjct: 419 LYVADTMNRTIRKITPSGN-VTTIAGSPGQIGSADGTGAAARFSYPTKLTVAEDGNIYVA 477

Query: 909 D 909
           D
Sbjct: 478 D 478



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 32/324 (9%)

Query: 603 PGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRDGSFDDAT 655
           P  + ID   N LF++DS++  I       VVT + G+      +   +G  DG+   A+
Sbjct: 351 PAGVGIDASGN-LFVTDSDNASIRKVTPARVVTLVAGSL-----AGDSDGSADGTGTAAS 404

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           F+ P+G+A +   NL YVADT N  +R+I   +  V T+AG+  +     G   G +   
Sbjct: 405 FHSPEGVAADPAGNL-YVADTMNRTIRKIT-PSGNVTTIAGSPGQIGSADG--TGAAARF 460

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
           + P  +    + E   I +A +++I    T  GV  + +GD         +  +  F   
Sbjct: 461 SYPTKLT---VAEDGNIYVADEYRI-RKLTPGGVVTSLAGDYDNSGSADGTGTSARFGGV 516

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           +GI+ S     +YV+DS + ++R + L  G    LAG        +   G  DG G+   
Sbjct: 517 AGIA-SDGAGSLYVSDSGNYTVRKVTLA-GVVTTLAG-------QVGIQGSDDGTGTGAT 567

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLSEP 894
                G+    +G I+VAD+ N+ I+K+  A   V+T AG  G+ G  DG    A+ S+P
Sbjct: 568 FSRVAGITVTPSGNIFVADTDNNVIRKITVA-GVVTTFAGAAGQGGNDDGMGSNARFSQP 626

Query: 895 AGIIEAQNGNLFIADTNNNIIRYL 918
             +    +GNL++A+     IR +
Sbjct: 627 HFVATDSSGNLYVAEWGEATIRKI 650



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 25/281 (8%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
           G  DG+   A F+ P G+  ++  NL YVAD  N A+R++   +  V   AG+     DY
Sbjct: 282 GAVDGTGTAARFSWPVGITIDSSDNL-YVADYSNSAIRKVT-SSAVVSNFAGSY---GDY 336

Query: 705 QGGE-KGTSQLLNSPWDVCYKPINEKVYIA---MAGQHQIWEHSTVDGVTRAFSGDGYER 760
              +  GT+     P  V     +  +++     A   ++     V  V  + +GD  + 
Sbjct: 337 GAVDGTGTAARFAGPAGVGIDA-SGNLFVTDSDNASIRKVTPARVVTLVAGSLAGD-SDG 394

Query: 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN 820
           + +G+ +   SF  P G++  P    +YVAD+ + +IR +     G+     G P     
Sbjct: 395 SADGTGTA-ASFHSPEGVAADPA-GNLYVADTMNRTIRKITPS--GNVTTIAGSP----- 445

Query: 821 LFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKA 879
             + G  DG G+     +P  +  A++G IYVAD Y  +I+KL P    V++LAG    +
Sbjct: 446 -GQIGSADGTGAAARFSYPTKLTVAEDGNIYVADEY--RIRKLTPG-GVVTSLAGDYDNS 501

Query: 880 GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920
           G  DG   +A+    AGI     G+L+++D+ N  +R + L
Sbjct: 502 GSADGTGTSARFGGVAGIASDGAGSLYVSDSGNYTVRKVTL 542



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 19/274 (6%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A D   N L+++D+ +  I      GN     GS G+ G  DG+   A F+ P  L
Sbjct: 408 PEGVAADPAGN-LYVADTMNRTIRKITPSGNVTTIAGSPGQIGSADGTGAAARFSYPTKL 466

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVC 722
              A+   +YVAD   + +R++      V +LAG+        G   GTS        + 
Sbjct: 467 TV-AEDGNIYVAD--EYRIRKLT-PGGVVTSLAGDYDNSGSADG--TGTSARFGGVAGIA 520

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                  +Y++ +G + +    T+ GV    +G    +  +  +    +F++ +GI+++P
Sbjct: 521 SDGAGS-LYVSDSGNYTV-RKVTLAGVVTTLAGQVGIQGSDDGTGTGATFSRVAGITVTP 578

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
               I+VAD++++ IR + +        AG    F     + G+ DGMGS      P  V
Sbjct: 579 S-GNIFVADTDNNVIRKITV--------AGVVTTFAGAAGQGGNDDGMGSNARFSQPHFV 629

Query: 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI 876
               +G +YVA+     I+K+   +  V+T+AG+
Sbjct: 630 ATDSSGNLYVAEWGEATIRKITSGA-VVTTIAGV 662


>gi|290975356|ref|XP_002670409.1| predicted protein [Naegleria gruberi]
 gi|284083967|gb|EFC37665.1| predicted protein [Naegleria gruberi]
          Length = 2200

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 136/258 (52%), Gaps = 32/258 (12%)

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQ-------GGEKGTSQLLNSPWDVCYKP 725
           + DT+N  +R+I F+N T+ TL  N   G+ ++         E   + +LN    +    
Sbjct: 86  IVDTQNGRIRKI-FMNGTIFTLPINMQTGNKFKPTMAVLFRNELYMTDVLNH--RILSVS 142

Query: 726 INEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM 785
           ++  +   ++G+    EHS  DG    FSGDG    L   + LN+    P+G+S+S +  
Sbjct: 143 LSSYLVTIVSGKQNCNEHSDCDG----FSGDG---GLASRAKLNS----PNGLSISQN-G 190

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA 845
           EIY+AD+ +  IR +N     S +   G          FG   G      L  P GV+ +
Sbjct: 191 EIYIADTLNHRIRKINSYGVISTIAGTGRA-------SFGGDGGFAVLSPLNSPNGVHIS 243

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALAAQLSEPAGIIEAQNG 903
           +NG+IY+AD+ NH+I+K+   +  ++T+AG G+A F    G A+ +QL+ P G+  +Q+G
Sbjct: 244 QNGEIYIADTLNHRIRKIF-VNGLITTVAGTGRASFGGDGGLAINSQLNSPYGVHVSQSG 302

Query: 904 NLFIADTNNNIIRYLDLN 921
            ++IADT N+ IR + +N
Sbjct: 303 EIYIADTLNHRIRKIFVN 320



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 32/267 (11%)

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAG--NGTKGSDYQG--GEKGTSQL--LNSPWDV 721
           +N LY+ D  NH +  +   +  V  ++G  N  + SD  G  G+ G +    LNSP  +
Sbjct: 125 RNELYMTDVLNHRILSVSLSSYLVTIVSGKQNCNEHSDCDGFSGDGGLASRAKLNSPNGL 184

Query: 722 CYKPINEKVYIAMAGQHQIWEH------STVDGVTRA-FSGDGYERNLNGSSSLNTSFAQ 774
                N ++YIA    H+I +       ST+ G  RA F GDG    L   S LN+    
Sbjct: 185 SISQ-NGEIYIADTLNHRIRKINSYGVISTIAGTGRASFGGDGGFAVL---SPLNS---- 236

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834
           P+G+ +S +  EIY+AD+ +  IR +    G    +AG           FG   G+    
Sbjct: 237 PNGVHISQN-GEIYIADTLNHRIRKI-FVNGLITTVAG------TGRASFGGDGGLAINS 288

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKL--DPASNRVSTLAGIGKAGFKDGAALAAQLS 892
            L  P GV+ +++G+IY+AD+ NH+I+K+  +     ++  +  G  G   G ++A++L+
Sbjct: 289 QLNSPYGVHVSQSGEIYIADTLNHRIRKIFVNGTITTIAGSSSDGSFGGDGGLSIASRLN 348

Query: 893 EPAGIIEAQNGN-LFIADTNNNIIRYL 918
            P G+  + N N + IADT+NN IR +
Sbjct: 349 SPKGVFVSPNNNEILIADTSNNRIRKI 375



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 57/304 (18%)

Query: 583 LPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSG 642
           LP++++  N         KF   +A+ +  N L+++D  ++RI+   L  +++V I  SG
Sbjct: 106 LPINMQTGN---------KFKPTMAV-LFRNELYMTDVLNHRILSVSLS-SYLVTI-VSG 153

Query: 643 EEGLRDGSFDD-----------ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691
           ++   + S  D           A  N P GL+  ++   +Y+ADT NH +R+I+     +
Sbjct: 154 KQNCNEHSDCDGFSGDGGLASRAKLNSPNGLSI-SQNGEIYIADTLNHRIRKINSY-GVI 211

Query: 692 RTLAGNGTKGSDYQGGEKGTSQL--LNSPWDVCYKPINEKVYIAMAGQHQIWEH------ 743
            T+AG G       GG+ G + L  LNSP  V +   N ++YIA    H+I +       
Sbjct: 212 STIAGTGRASF---GGDGGFAVLSPLNSPNGV-HISQNGEIYIADTLNHRIRKIFVNGLI 267

Query: 744 STVDGVTRA-FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
           +TV G  RA F GDG         ++N+    P G+ +S    EIY+AD+ +  IR +  
Sbjct: 268 TTVAGTGRASFGGDG-------GLAINSQLNSPYGVHVSQS-GEIYIADTLNHRIRKI-- 317

Query: 803 KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL--LQHPLGVYCA-KNGQIYVADSYNHK 859
                  + G       +          G  +   L  P GV+ +  N +I +AD+ N++
Sbjct: 318 ------FVNGTITTIAGSSSDGSFGGDGGLSIASRLNSPKGVFVSPNNNEILIADTSNNR 371

Query: 860 IKKL 863
           I+K+
Sbjct: 372 IRKI 375


>gi|427407940|ref|ZP_18898142.1| hypothetical protein HMPREF9718_00616 [Sphingobium yanoikuyae ATCC
           51230]
 gi|425713903|gb|EKU76915.1| hypothetical protein HMPREF9718_00616 [Sphingobium yanoikuyae ATCC
           51230]
          Length = 356

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 65/119 (54%)

Query: 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAV 510
           L+GKVV+++FWTY CIN +  LP L   +++Y D    VVGVH+ +F  E D   +R A 
Sbjct: 61  LRGKVVLVNFWTYSCINSLRALPYLRAWQERYGDKGLVVVGVHAPEFRFEHDPAKVRQAT 120

Query: 511 LRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            R G+ +P + D D  +W+  G   WP F  +   G++     GEG   + + L+   L
Sbjct: 121 ARLGVDYPNLQDNDYAVWQAFGNQGWPGFYFIDARGQVRGYRVGEGDYAESEQLIRRLL 179


>gi|73667741|ref|YP_303756.1| beta-phosphoglucomutase [Methanosarcina barkeri str. Fusaro]
 gi|72394903|gb|AAZ69176.1| beta-phosphoglucomutase [Methanosarcina barkeri str. Fusaro]
          Length = 220

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGV--ASVK 136
           + A++FDMDGVL +S      A    F +MG+E+  +D     G+   N L  +   + K
Sbjct: 2   LKALIFDMDGVLVDSMPFHAVAWKKAFFDMGMEIQDQDIYSIEGSNPKNGLPLLIRKARK 61

Query: 137 GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
             + +D E        IY  ++ +      F G  E +   K++ L ++V S +D + V 
Sbjct: 62  EPEAYDFETIT----SIYRKEFKRVFKLKAFDGMRECLEVLKTRFL-LSVVSGSDHLIVH 116

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
             +     P  +FD +V+ D  +N KP PD FL A K+LNV   ECIVIE+A+ GV+AAK
Sbjct: 117 -EIVDQLFP-GIFDIVVTGDDVKNSKPYPDPFLKAVKLLNVQREECIVIENAILGVEAAK 174

Query: 257 AAQMRCIAVTTTLSEERLKEA 277
            A++ CI + T L   +L  A
Sbjct: 175 KAKIYCIGIPTYLKPSQLDRA 195


>gi|420153225|ref|ZP_14660216.1| cytochrome C biogenesis protein transmembrane region [Actinomyces
           massiliensis F0489]
 gi|394761389|gb|EJF43761.1| cytochrome C biogenesis protein transmembrane region [Actinomyces
           massiliensis F0489]
          Length = 562

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 7/157 (4%)

Query: 439 WLNTAPLQ--FRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496
           WLNT+  Q     D  GKV ++DFW Y CINC   +P ++ L + Y D+   V+GVHS +
Sbjct: 278 WLNTSGEQPLADADRAGKVNLVDFWAYSCINCQRSIPGIQKLHETYGDLGLQVIGVHSPE 337

Query: 497 FDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
           +  EK+++ +R      G+++PV  D D+  WR    + WP   +    G+L     GEG
Sbjct: 338 YAFEKEVDNVRGGAADLGVTYPVAVDSDLVTWRNFDNHYWPAHYLADSTGELRQVKFGEG 397

Query: 557 HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDP 593
                + LV   L     ++   +  LP  +  D++P
Sbjct: 398 GEATTERLVRELL-----REANPDVQLPAPVFTDDEP 429


>gi|329908045|ref|ZP_08274805.1| hypothetical protein IMCC9480_3485 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546778|gb|EGF31712.1| hypothetical protein IMCC9480_3485 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 685

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 161/381 (42%), Gaps = 61/381 (16%)

Query: 585 LSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQI-GSSGE 643
           + ++   D R   +   +P  +A+D+    + +SD+ +N  V T   G  +  + GS+G 
Sbjct: 157 VGVDGSTDGRGNAARFSYPQGIAVDVAGT-VLVSDT-YNHTVRTISPGGVVGTLAGSAGN 214

Query: 644 EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREI---DFVNDTVRTLAGNGTK 700
            G+ DG    A F+ PQGL  +A +N+ YVAD  N  LR++     V     +LA  G K
Sbjct: 215 FGVLDGVRSAARFSNPQGLVTDAARNI-YVADAGNGVLRKVTPAGIVTTLAGSLANYGLK 273

Query: 701 -GSDYQGGEKGTSQLLNSPWDVCYK--------------------PINE----------- 728
            G+    G +G S L      + Y                     P+N            
Sbjct: 274 DGTGAAAGFEGLSNLAIDGAGILYGADQYARRIRRITPQGVVTTLPVNALSVSHPQVAMP 333

Query: 729 -------KVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
                     +++ GQ+ +  H    G T +  +G   ER +   +     F    G++ 
Sbjct: 334 LGIAVDPTGTLSVTGQYGV--HVITGGTTLKTLAGKELERGMVDGNGAKARFGSLQGVT- 390

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
           S      YV D+    IR +      S+L   G P         G  DG GS     +P 
Sbjct: 391 SDASGNWYVVDTPHHMIRKITPAGVVSQLAGNGKP---------GGVDGTGSGASFNYPR 441

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA-GFKDGAALAAQLSEPAGIIE 899
           G+     G ++VAD++N +I+K+ PA   V+T+AG G + G  DG    A+  EP  I  
Sbjct: 442 GIVADALGNLFVADTFNSRIRKITPA-GVVTTIAGAGSSSGSTDGPGNIARFFEPEAIAI 500

Query: 900 AQNGNLFIADTNNNIIRYLDL 920
             + NL++ADT N+ +R + +
Sbjct: 501 DASRNLYVADTGNHTVRKITV 521



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 160/409 (39%), Gaps = 74/409 (18%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
             +P  +AID     L+++D+N+  I      G      G  G +G  DG  + A F+ P
Sbjct: 117 FNYPQSIAIDRAGT-LYVADTNNQTIRKITPQGVVTTIAGRVGVDGSTDGRGNAARFSYP 175

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           QG+A +    +L V+DT NH +R I      V TLAG+        G    ++   ++P 
Sbjct: 176 QGIAVDVAGTVL-VSDTYNHTVRTIS-PGGVVGTLAGSAGNFGVLDGVR--SAARFSNPQ 231

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHS---------------------------------TV 746
            +        +Y+A AG   + + +                                  +
Sbjct: 232 GLVTDAA-RNIYVADAGNGVLRKVTPAGIVTTLAGSLANYGLKDGTGAAAGFEGLSNLAI 290

Query: 747 DGVTRAFSGDGYERNL--------------NGSSSLNTSFAQPSGISLSPDFMEIYVADS 792
           DG    +  D Y R +              N  S  +   A P GI++ P          
Sbjct: 291 DGAGILYGADQYARRIRRITPQGVVTTLPVNALSVSHPQVAMPLGIAVDP------TGTL 344

Query: 793 ESSSIRALNLKTGGSRL--LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI 850
             +    +++ TGG+ L  LAG +        + G  DG G++       GV    +G  
Sbjct: 345 SVTGQYGVHVITGGTTLKTLAGKE-------LERGMVDGNGAKARFGSLQGVTSDASGNW 397

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT 910
           YV D+ +H I+K+ PA   VS LAG GK G  DG    A  + P GI+    GNLF+ADT
Sbjct: 398 YVVDTPHHMIRKITPA-GVVSQLAGNGKPGGVDGTGSGASFNYPRGIVADALGNLFVADT 456

Query: 911 NNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRLRRRSSPDAQTI 959
            N+ IR     K  P      + G    +  +  P  + R   P+A  I
Sbjct: 457 FNSRIR-----KITPAGVVTTIAGAGSSSGSTDGPGNIARFFEPEAIAI 500



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 141/308 (45%), Gaps = 21/308 (6%)

Query: 616 FISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675
           ++ D+ H+ I      G  + Q+  +G+ G  DG+   A+FN P+G+  +A  NL +VAD
Sbjct: 398 YVVDTPHHMIRKITPAG-VVSQLAGNGKPGGVDGTGSGASFNYPRGIVADALGNL-FVAD 455

Query: 676 TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735
           T N  +R+I      V T+AG G+      G   G       P  +     +  +Y+A  
Sbjct: 456 TFNSRIRKITPAG-VVTTIAGAGSSSGSTDG--PGNIARFFEPEAIAIDA-SRNLYVADT 511

Query: 736 GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESS 795
           G H +    TV GV    +G   +   +  +     F +P  I++ P    + ++     
Sbjct: 512 GNHTV-RKITVAGVVSTLAGSPGKYGSDDGTGAAARFLKPPAIAVDPS-GNVVLSQPAYG 569

Query: 796 SIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADS 855
           +IR +    G    LAG        + + G  DG G      +P G+     G +YVAD+
Sbjct: 570 TIRKIT-PGGVVTTLAG-------RVLETGALDGAGDAARFFNPQGLAADNAGNVYVADT 621

Query: 856 YNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
            N+ I+++ P S +VST+AG+ G  G + G AL   L++P  +  A +G   +A  N N 
Sbjct: 622 GNNTIRRITP-SGQVSTVAGVPGLVGIRTG-ALPGSLAQPMAL--AMSGASTLAVINENA 677

Query: 915 IRYLDLNK 922
           +  L L K
Sbjct: 678 VLRLVLPK 685



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 128/294 (43%), Gaps = 23/294 (7%)

Query: 643 EEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGS 702
           E G+ DG+   A F   QG+  +A  N  YV DT +H +R+I      V  LAGNG  G 
Sbjct: 370 ERGMVDGNGAKARFGSLQGVTSDASGNW-YVVDTPHHMIRKITPAG-VVSQLAGNGKPGG 427

Query: 703 DYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL 762
              G   G S   N P  +    +   +++A     +I    T  GV    +G G     
Sbjct: 428 -VDGTGSGAS--FNYPRGIVADALGN-LFVADTFNSRI-RKITPAGVVTTIAGAGSSSGS 482

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
                    F +P  I++      +YVAD+ + ++R + +  G    LAG       +  
Sbjct: 483 TDGPGNIARFFEPEAIAIDAS-RNLYVADTGNHTVRKITVA-GVVSTLAG-------SPG 533

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGF 881
           K+G  DG G+      P  +    +G + ++      I+K+ P    V+TLAG + + G 
Sbjct: 534 KYGSDDGTGAAARFLKPPAIAVDPSGNVVLSQPAYGTIRKITPG-GVVTTLAGRVLETGA 592

Query: 882 KDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
            DGA  AA+   P G+     GN+++ADT NN IR +      P  Q   + GV
Sbjct: 593 LDGAGDAARFFNPQGLAADNAGNVYVADTGNNTIRRI-----TPSGQVSTVAGV 641



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 18/267 (6%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
             FP  +A+D + NR +++D  ++ I     DG+     G+    G  DG+   A FN P
Sbjct: 62  FNFPIGIAVDGVGNR-YVADWQNHVIRKVSADGSVSTLAGAMSTPGAADGTGTAARFNYP 120

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           Q +A + +   LYVADT N  +R+I      V T+AG    G D     +G +   + P 
Sbjct: 121 QSIAID-RAGTLYVADTNNQTIRKIT-PQGVVTTIAGR--VGVDGSTDGRGNAARFSYPQ 176

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGI 778
            +    +   V ++    H +   S   GV    +G  G    L+G  S    F+ P G+
Sbjct: 177 GIAVD-VAGTVLVSDTYNHTVRTISP-GGVVGTLAGSAGNFGVLDGVRSA-ARFSNPQGL 233

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
            ++     IYVAD+ +  +R +    G    LAG       +L  +G +DG G+    + 
Sbjct: 234 -VTDAARNIYVADAGNGVLRKVT-PAGIVTTLAG-------SLANYGLKDGTGAAAGFEG 284

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDP 865
              +     G +Y AD Y  +I+++ P
Sbjct: 285 LSNLAIDGAGILYGADQYARRIRRITP 311



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 24/186 (12%)

Query: 741 WEHSTVDGVTRAFSGDGYERNLNGSSSL---------NTSFAQPSGISLSPDFMEIYVAD 791
           W++     V R  S DG    L G+ S             F  P  I++      +YVAD
Sbjct: 81  WQNH----VIRKVSADGSVSTLAGAMSTPGAADGTGTAARFNYPQSIAID-RAGTLYVAD 135

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIY 851
           + + +IR +  + G    +AG        +   G  DG G+     +P G+     G + 
Sbjct: 136 TNNQTIRKITPQ-GVVTTIAG-------RVGVDGSTDGRGNAARFSYPQGIAVDVAGTVL 187

Query: 852 VADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT 910
           V+D+YNH ++ + P    V TLAG  G  G  DG   AA+ S P G++     N+++AD 
Sbjct: 188 VSDTYNHTVRTISPG-GVVGTLAGSAGNFGVLDGVRSAARFSNPQGLVTDAARNIYVADA 246

Query: 911 NNNIIR 916
            N ++R
Sbjct: 247 GNGVLR 252



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 123/270 (45%), Gaps = 21/270 (7%)

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
           + A FN P G+A +   N  YVAD +NH +R++   + +V TLAG  +      G   GT
Sbjct: 58  NQARFNFPIGIAVDGVGNR-YVADWQNHVIRKVS-ADGSVSTLAGAMSTPGAADG--TGT 113

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNT 770
           +   N P  +        +Y+A    +Q     T  GV    +G  G + + +G  +   
Sbjct: 114 AARFNYPQSIAIDRAGT-LYVADT-NNQTIRKITPQGVVTTIAGRVGVDGSTDGRGNA-A 170

Query: 771 SFAQPSGISLSPDFM-EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
            F+ P GI++  D    + V+D+ + ++R ++   G    LAG       +   FG  DG
Sbjct: 171 RFSYPQGIAV--DVAGTVLVSDTYNHTVRTIS-PGGVVGTLAG-------SAGNFGVLDG 220

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALA 888
           + S     +P G+       IYVAD+ N  ++K+ PA   V+TLAG +   G KDG   A
Sbjct: 221 VRSAARFSNPQGLVTDAARNIYVADAGNGVLRKVTPA-GIVTTLAGSLANYGLKDGTGAA 279

Query: 889 AQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           A     + +     G L+ AD     IR +
Sbjct: 280 AGFEGLSNLAIDGAGILYGADQYARRIRRI 309


>gi|428174200|gb|EKX43097.1| hypothetical protein GUITHDRAFT_153351 [Guillardia theta CCMP2712]
          Length = 392

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 49/316 (15%)

Query: 620 SNHNRIVVTDLDGNFIVQ---------IGSSGEEGLRDGSFDDATFNRPQGLA----YNA 666
           +N N I+V D  GN +V+         I  +G +G+ DG    A FN P  +A    +N 
Sbjct: 56  ANGNSILVVD-TGNNVVRLLASAQVSTIAGNGRQGVADGQATSAEFNSPSDVATKTDFNT 114

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL---LNSPWDVCY 723
                 V+DT N  +R +                   Y G E+  S +   +  P  +  
Sbjct: 115 GMVTALVSDTNNKKIRFL-------------------YVGQEQVGSFVQTSMQQPSALAL 155

Query: 724 KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783
            P    + ++    HQ+   +  DG T  F G+G     +G+++   SF  P G++ SPD
Sbjct: 156 APNQATLIVSDLELHQLLTFNMADGKTSKFVGNGQRGYQDGATA---SFNGPRGLTFSPD 212

Query: 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVY 843
              I VAD+ +  +R +++ +  +  LAG   +        G +DGMG +   Q P G+ 
Sbjct: 213 GTYILVADTGNHVVRKIDVGSAMTSTLAGAAGMA-------GYQDGMGVDARFQSPYGIT 265

Query: 844 CAKNGQI-YVADSYNHKIKKLDPASNRVSTLAGIGK--AGFKDGAALAAQLSEPAGIIEA 900
               GQ  YV+++  ++I+ +D A+N VS+++G     AG +DG    A+ S P G+   
Sbjct: 266 IDSVGQFAYVSETDGNRIRMIDLATNVVSSISGSSLGLAGSQDGEGYTARFSGPKGVTLM 325

Query: 901 QNGNLFIADTNNNIIR 916
            +  L ++D+NNN IR
Sbjct: 326 NDQVLLVSDSNNNRIR 341



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 11/220 (5%)

Query: 649 GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
           GSF   +  +P  LA    +  L V+D E H L   +  +       GNG +G  YQ G 
Sbjct: 140 GSFVQTSMQQPSALALAPNQATLIVSDLELHQLLTFNMADGKTSKFVGNGQRG--YQDGA 197

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL 768
             +    N P  + + P    + +A  G H + +      +T   +G            +
Sbjct: 198 TAS---FNGPRGLTFSPDGTYILVADTGNHVVRKIDVGSAMTSTLAGAAGMAGYQDGMGV 254

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
           +  F  P GI++       YV++++ + IR ++L T     ++G            G +D
Sbjct: 255 DARFQSPYGITIDSVGQFAYVSETDGNRIRMIDLATNVVSSISGSSLGLA------GSQD 308

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
           G G       P GV    +  + V+DS N++I+ +    N
Sbjct: 309 GEGYTARFSGPKGVTLMNDQVLLVSDSNNNRIRAVATKDN 348



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 34/221 (15%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFN 657
           + ++ P  LA+      L +SD   ++++  ++      +   +G+ G +DG+   A+FN
Sbjct: 145 TSMQQPSALALAPNQATLIVSDLELHQLLTFNMADGKTSKFVGNGQRGYQDGA--TASFN 202

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-NGTKGSDYQGGEKGTSQLLN 716
            P+GL ++     + VADT NH +R+ID  +    TLAG  G  G  YQ G  G      
Sbjct: 203 GPRGLTFSPDGTYILVADTGNHVVRKIDVGSAMTSTLAGAAGMAG--YQDG-MGVDARFQ 259

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS--------------GDGYERNL 762
           SP+ +    + +  Y++    ++I     +D  T   S              G+GY    
Sbjct: 260 SPYGITIDSVGQFAYVSETDGNRI---RMIDLATNVVSSISGSSLGLAGSQDGEGYT--- 313

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
                    F+ P G++L  D + + V+DS ++ IRA+  K
Sbjct: 314 -------ARFSGPKGVTLMNDQV-LLVSDSNNNRIRAVATK 346



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 839 PLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI 897
           P G+    NG  I V D+ N+ ++ L  AS +VST+AG G+ G  DG A +A+ + P+ +
Sbjct: 49  PSGISTWANGNSILVVDTGNNVVRLL--ASAQVSTIAGNGRQGVADGQATSAEFNSPSDV 106

Query: 898 IEAQNGNL-----FIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKR 947
               + N       ++DTNN  IR+L + +E  ++ +     +Q P+  + +P +
Sbjct: 107 ATKTDFNTGMVTALVSDTNNKKIRFLYVGQE--QVGSFVQTSMQQPSALALAPNQ 159


>gi|429332521|ref|ZP_19213240.1| cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           putida CSV86]
 gi|428762781|gb|EKX84977.1| cytochrome c biogenesis protein, transmembrane region [Pseudomonas
           putida CSV86]
          Length = 402

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P     ++WLN+  L     L+GKVV++DFWT+ CINC H LP ++    +Y      V
Sbjct: 257 MPSLGGAVEWLNSPELS-AEALRGKVVLVDFWTFDCINCQHTLPYVKQWADRYGKDGLVV 315

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+    +R  V + GI++PV  D D  +WR+     WP   ++   G++ 
Sbjct: 316 IGVHTPEYPFERVPANVRRQVRKLGITYPVAIDNDYAIWRQFANQYWPAHYLIDATGQVR 375

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + ++E  L
Sbjct: 376 YAHFGEGAYATQEHVIEKLL 395


>gi|434385105|ref|YP_007095716.1| AhpC/TSA family protein [Chamaesiphon minutus PCC 6605]
 gi|428016095|gb|AFY92189.1| AhpC/TSA family protein [Chamaesiphon minutus PCC 6605]
          Length = 208

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +PEF    +WLN++PL  ++DL+G V ++  WT+ CINC   LP +    ++Y      V
Sbjct: 59  LPEFQGIQEWLNSSPLT-KKDLQGSVALIHIWTFACINCQRTLPYIVKWHQQYAKQGLKV 117

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           V VH+ +F  E+ +  I+ A+ ++GI++PV  D D   W+      WP   +    G ++
Sbjct: 118 VSVHTPEFPYERKIANIQAAIKKHGITYPVAVDNDFKTWQAYKNEYWPHLFLANRQGTIV 177

Query: 550 AQLAGEG 556
               GEG
Sbjct: 178 NDRIGEG 184


>gi|255589882|ref|XP_002535117.1| nhl repeat-containing protein, putative [Ricinus communis]
 gi|223523999|gb|EEF27264.1| nhl repeat-containing protein, putative [Ricinus communis]
          Length = 435

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 21/230 (9%)

Query: 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750
           + T+AG+G  GS    G++        P+ V        +Y+A  G +       +DGVT
Sbjct: 44  ITTMAGDGLPGSSNGSGKR---TRFADPFGVALDR-QGNLYVADGGDNNSIRKIDLDGVT 99

Query: 751 RAFSG--DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
              +G  +GY      +++ NT    PSG+++      +YVAD+ +++IR +    G   
Sbjct: 100 TTLAGGTEGYAEGAPTAAAFNT----PSGLAIDA-AGNLYVADTGNNAIRKIG-PDGTVS 153

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
            LAG      D L   GD+DG G+      P+GV     G +YV D+YN +I+++ P   
Sbjct: 154 TLAG------DGLA--GDKDGKGAGAQFNGPIGVAVDAAGVVYVTDTYNDRIRRIAP-DG 204

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            V+T+AG  +AG  DGA   A    P GI    +G L+IADT N+ IR +
Sbjct: 205 TVTTVAGGKRAGMADGAGAQALFDTPTGIALGASGALYIADTGNSAIRKI 254



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 162/353 (45%), Gaps = 45/353 (12%)

Query: 603 PGKLAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQG 661
           P  +A+D   N L+++D  ++N I   DLDG  +    + G EG  +G+   A FN P G
Sbjct: 68  PFGVALDRQGN-LYVADGGDNNSIRKIDLDG--VTTTLAGGTEGYAEGAPTAAAFNTPSG 124

Query: 662 LAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDV 721
           LA +A  NL YVADT N+A+R+I   + TV TLAG+G  G D  G  KG     N P  V
Sbjct: 125 LAIDAAGNL-YVADTGNNAIRKIG-PDGTVSTLAGDGLAG-DKDG--KGAGAQFNGPIGV 179

Query: 722 CYKPINEKVYIAMAGQHQI------WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP 775
                   VY+      +I         +TV G  RA   DG      G+ +L   F  P
Sbjct: 180 AVDAAG-VVYVTDTYNDRIRRIAPDGTVTTVAGGKRAGMADGA-----GAQAL---FDTP 230

Query: 776 SGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           +GI+L      +Y+AD+ +S+IR +  K G    +A           K  DRD      L
Sbjct: 231 TGIALGASGA-LYIADTGNSAIRKIG-KDGTVSTVA---------AAKEDDRD-----SL 274

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L+ P+G+    +G +Y+A   + ++ ++ P    V+ L  +       GA  + +L  P 
Sbjct: 275 LRSPVGIAATTDGFLYIASGAHGRVAQITPQGEAVA-LQDVDHPARPGGADGSVRLYAPR 333

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRL 948
           GI   ++G+LF+ D     + ++ +   + E    E     PP   S S   L
Sbjct: 334 GIALYKDGSLFVTDGATFRLHHIGMVSADTEALADE----PPPGAPSHSATML 382



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 27/298 (9%)

Query: 635 IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT-ENHALREIDFVNDTVRT 693
           I  +   G  G  +GS     F  P G+A + + NL YVAD  +N+++R+ID   D V T
Sbjct: 44  ITTMAGDGLPGSSNGSGKRTRFADPFGVALDRQGNL-YVADGGDNNSIRKIDL--DGVTT 100

Query: 694 LAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAF 753
               GT+G  Y  G   T+   N+P  +        +Y+A  G + I +    DG     
Sbjct: 101 TLAGGTEG--YAEGAP-TAAAFNTPSGLAIDAAG-NLYVADTGNNAIRKIGP-DGTVSTL 155

Query: 754 SGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG 813
           +GDG   + +G  +    F  P G+++    + +YV D+ +  IR +    G    +AGG
Sbjct: 156 AGDGLAGDKDGKGA-GAQFNGPIGVAVDAAGV-VYVTDTYNDRIRRI-APDGTVTTVAGG 212

Query: 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
                    + G  DG G++ L   P G+    +G +Y+AD+ N  I+K+     +  T+
Sbjct: 213 K--------RAGMADGAGAQALFDTPTGIALGASGALYIADTGNSAIRKI----GKDGTV 260

Query: 874 AGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931
           + +  A   D  +L   L  P GI    +G L+IA   +  +  +    E   LQ ++
Sbjct: 261 STVAAAKEDDRDSL---LRSPVGIAATTDGFLYIASGAHGRVAQITPQGEAVALQDVD 315



 Score = 40.4 bits (93), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD-TNNNIIRYLDLN 921
           R++T+AG G  G  +G+    + ++P G+   + GNL++AD  +NN IR +DL+
Sbjct: 43  RITTMAGDGLPGSSNGSGKRTRFADPFGVALDRQGNLYVADGGDNNSIRKIDLD 96


>gi|383785688|ref|YP_005470258.1| hypothetical protein LFE_2457 [Leptospirillum ferrooxidans C2-3]
 gi|383084601|dbj|BAM08128.1| hypothetical protein LFE_2457 [Leptospirillum ferrooxidans C2-3]
          Length = 341

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P F     W+N+ PL     L+GKVV++DFW Y C+NC+   P L+   + Y      +
Sbjct: 31  LPSFSGATGWINSPPLT-DGSLRGKVVLIDFWEYTCVNCVRTFPVLKRWYRTYGPKGLVL 89

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +G+H+ +F   +    +  AV +Y + +PV  D D  LW     + WP   +   NGKL+
Sbjct: 90  IGIHTPEFSFARKENHVAYAVKKYHLEYPVAIDSDRRLWDRFHNHYWPAQYLFDRNGKLI 149

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  + ++  +  A+
Sbjct: 150 FHTIGEGDDERMEAAIRGAI 169


>gi|345299329|ref|YP_004828687.1| alkyl hydroperoxide reductase [Enterobacter asburiae LF7a]
 gi|345093266|gb|AEN64902.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Enterobacter asburiae LF7a]
          Length = 396

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     LKGKVV++DFWT+ CINC H LP +     KY+     V
Sbjct: 253 LPSLSGGTGWINGDPVT-PESLKGKVVLIDFWTWDCINCQHTLPYVRDWANKYQSQGLVV 311

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L ++++AV ++ + + VV D +  +W   G   WP        G+L 
Sbjct: 312 IGVHTPEYPWEKPLSSVKDAVNKWQLPYRVVADNNYQIWNAFGNQYWPAHYYFDAKGQLR 371

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 372 YTSFGEGNYDKQEQVIQQLL 391


>gi|381189128|ref|ZP_09896683.1| phosphoglycolate phosphatase [Flavobacterium frigoris PS1]
 gi|379648821|gb|EIA07401.1| phosphoglycolate phosphatase [Flavobacterium frigoris PS1]
          Length = 223

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 2/204 (0%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           +  V+FDMDGV+ ++E   R A    F+E+ ++VT E F  F G    N    V  +  +
Sbjct: 2   IQTVIFDMDGVIVDTEPVHRYAYFQQFSELKIDVTEEMFTSFTGNSTRNTFQKVKDIFQL 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
              D E   +R   I+ D + K        G   LI     KG+++ +ASSA ++ ++  
Sbjct: 62  D-HDVEDLIQRKRTIFNDAFDKKEDLELLTGVEILIKDFHHKGMQLILASSASKVTIERV 120

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
                L    F  IVS + F   KP P IF  A+ +   P   CIVIED+  G++AAKAA
Sbjct: 121 FNRFKLH-DYFTHIVSGEDFPKSKPHPAIFEHAASLSIAPKENCIVIEDSTNGIKAAKAA 179

Query: 259 QMRCIAVTTTLSEERLKEASPSLI 282
            + CIA  +  S+++   A+  +I
Sbjct: 180 GIFCIAYNSFHSKDQDLSAADVVI 203


>gi|290985545|ref|XP_002675486.1| predicted protein [Naegleria gruberi]
 gi|284089082|gb|EFC42742.1| predicted protein [Naegleria gruberi]
          Length = 819

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 135/274 (49%), Gaps = 29/274 (10%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A FN P  + + +  N +Y++D  N+ +R+I   N  + T+AG G +G    GG    +Q
Sbjct: 90  AQFNHPCDV-FVSSTNEVYISDFGNYRIRKI-LRNGNIVTIAGTGEEGYSGDGGPAINAQ 147

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQH---QIWEHSTVDGVT----RAFSGDGYERNLNGSS 766
           +  S  +  +   N++VY +    H   +I  + T+  +     + FSGDG         
Sbjct: 148 I--SAVNNIFVSQNDEVYFSDFRNHRIRKILRNGTIVTIAGTGEQGFSGDG-------GP 198

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
           ++N     P G+ +S +  E+Y+ D +S  IR + L+ G    +AG              
Sbjct: 199 AINAKLNTPCGVFVSNN-DEVYIVDYKSHRIRKM-LQDGTIITIAGTGEQGFGGDGG--- 253

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DG 884
                +   L HP GV+ +   ++Y+ DSYN++I+K+    N ++T+AG G  G+    G
Sbjct: 254 ---PATSAQLSHPCGVFVSSTNEVYITDSYNYRIRKILRNGN-ITTIAGTGVKGYSGDGG 309

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            A+ AQ+S    I  +QN  ++IADTNN+ IR +
Sbjct: 310 LAINAQISYVENIFVSQNDEVYIADTNNHRIRKI 343



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 36/320 (11%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT---FNRPQGLAYNAKK 668
           N+ ++++D  ++R+     DG  IV I  +GEEG   G  D AT    + P  + + +  
Sbjct: 430 NDEVYMADCQNHRVRKILKDGT-IVTIAGTGEEGF-SGDGDPATSAQLSHPCSV-FVSST 486

Query: 669 NLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728
           N ++ AD+ N+ +R+I   N  + T+AG G KG    G     +Q+  S     +   N+
Sbjct: 487 NEVFFADSGNYRIRKI-LRNGNIVTIAGTGEKGYSGDGRPAINAQI--SYVQNIFVSQND 543

Query: 729 KVYIAMAGQH---QIWEHSTVDGVT----RAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781
           ++Y +  G H   +I  + T+  +     + FSGDG         + +     P G+ +S
Sbjct: 544 EIYFSDFGNHRIRKILRNGTIVTIAGTGEKGFSGDG-------GPATSAQLDSPCGVFVS 596

Query: 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPL 840
            +  E+Y+ D  +  IR + L+ G    +AG G+  F       GD  G      + HP 
Sbjct: 597 NN-DEVYIVDYNNHRIRKI-LRNGIINTIAGTGEEGFS------GD-GGPAINAQVNHPC 647

Query: 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQLSEPAGII 898
           GV+ +   ++Y+ +S N++I+K+   +N ++T+AG G  G+    G A+ AQ+S    I 
Sbjct: 648 GVFVSSTNEVYIMNSGNYRIRKILRNAN-ITTIAGTGVKGYSGDGGLAINAQISYVDNIF 706

Query: 899 EAQNGNLFIADTNNNIIRYL 918
            ++N  ++IADT N+ IR +
Sbjct: 707 VSRNDEVYIADTENHRIRKI 726



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 33/292 (11%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTS 712
           A  N P G+ + A  + +Y+AD +NH +R+I   + T+ T+AG G +G  + G G+  TS
Sbjct: 417 AMLNCPGGV-FVAPNDEVYMADCQNHRVRKI-LKDGTIVTIAGTGEEG--FSGDGDPATS 472

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEH------STVDGV-TRAFSGDGYERNLNGS 765
             L+ P  V     NE V+ A +G ++I +        T+ G   + +SGDG        
Sbjct: 473 AQLSHPCSVFVSSTNE-VFFADSGNYRIRKILRNGNIVTIAGTGEKGYSGDG-------R 524

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKF 824
            ++N   +    I +S +  EIY +D  +  IR + L+ G    +AG G+  F       
Sbjct: 525 PAINAQISYVQNIFVSQN-DEIYFSDFGNHRIRKI-LRNGTIVTIAGTGEKGFS------ 576

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-- 882
           GD  G  +   L  P GV+ + N ++Y+ D  NH+I+K+   +  ++T+AG G+ GF   
Sbjct: 577 GD-GGPATSAQLDSPCGVFVSNNDEVYIVDYNNHRIRKI-LRNGIINTIAGTGEEGFSGD 634

Query: 883 DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934
            G A+ AQ++ P G+  +    ++I ++ N  IR +  N     +    +KG
Sbjct: 635 GGPAINAQVNHPCGVFVSSTNEVYIMNSGNYRIRKILRNANITTIAGTGVKG 686



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 139/272 (51%), Gaps = 18/272 (6%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGS-FDDATFNRPQGLAYNAKKNL 670
           N +F +DS + RI     +GN IV I  +GE+G   DG    +A  +  Q + + ++ + 
Sbjct: 487 NEVFFADSGNYRIRKILRNGN-IVTIAGTGEKGYSGDGRPAINAQISYVQNI-FVSQNDE 544

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +Y +D  NH +R+I   N T+ T+AG G KG    GG   TS  L+SP  V +   N++V
Sbjct: 545 IYFSDFGNHRIRKI-LRNGTIVTIAGTGEKGFSGDGG-PATSAQLDSPCGV-FVSNNDEV 601

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           YI     H+I +    +G+    +G G E  + +G  ++N     P G+ +S    E+Y+
Sbjct: 602 YIVDYNNHRIRK-ILRNGIINTIAGTGEEGFSGDGGPAINAQVNHPCGVFVSST-NEVYI 659

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849
            +S +  IR + L+      +AG        +  +    G+     + +   ++ ++N +
Sbjct: 660 MNSGNYRIRKI-LRNANITTIAG------TGVKGYSGDGGLAINAQISYVDNIFVSRNDE 712

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
           +Y+AD+ NH+I+K+   +  + T+AG G+ GF
Sbjct: 713 VYIADTENHRIRKI-LRNGTIKTIAGNGEEGF 743



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 31/313 (9%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS-FDDATFNRPQGLAYNAKKNL 670
           N+ ++I D   +RI     DG  I   G+  +    DG     A  + P G+ + +  N 
Sbjct: 215 NDEVYIVDYKSHRIRKMLQDGTIITIAGTGEQGFGGDGGPATSAQLSHPCGV-FVSSTNE 273

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +Y+ D+ N+ +R+I   N  + T+AG G KG    GG    +Q+  S  +  +   N++V
Sbjct: 274 VYITDSYNYRIRKI-LRNGNITTIAGTGVKGYSGDGGLAINAQI--SYVENIFVSQNDEV 330

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFM---EI 787
           YIA    H+I +    DG     +G+G E+   G S  + S + P    +  D+    +I
Sbjct: 331 YIADTNNHRIRK-ILKDGTIETIAGNG-EKGFGGDSPFDFS-SHPH---IGNDYTIIPKI 384

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
            +       +  LNL  G   L+    P F              ++ +L  P GV+ A N
Sbjct: 385 QLKKHSRDELFGLNL-IGFIPLIEKLSPQFS-------------TKAMLNCPGGVFVAPN 430

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AALAAQLSEPAGIIEAQNGNL 905
            ++Y+AD  NH+++K+      + T+AG G+ GF  DG  A +AQLS P  +  +    +
Sbjct: 431 DEVYMADCQNHRVRKI-LKDGTIVTIAGTGEEGFSGDGDPATSAQLSHPCSVFVSSTNEV 489

Query: 906 FIADTNNNIIRYL 918
           F AD+ N  IR +
Sbjct: 490 FFADSGNYRIRKI 502



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 20/288 (6%)

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK--G 710
           DA  N P G+ + A  + +Y+AD  NH +R+I   + T+ T+AG G +  +   G+    
Sbjct: 30  DAMLNCPGGV-FVAPNDEIYIADNLNHRVRKI-LKDGTIVTIAGIGEEEGEGFSGDGGPA 87

Query: 711 TSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLN 769
           TS   N P DV     NE VYI+  G ++I +    +G     +G G E  + +G  ++N
Sbjct: 88  TSAQFNHPCDVFVSSTNE-VYISDFGNYRIRK-ILRNGNIVTIAGTGEEGYSGDGGPAIN 145

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRD 828
              +  + I +S +  E+Y +D  +  IR + L+ G    +AG G+  F       GD  
Sbjct: 146 AQISAVNNIFVSQN-DEVYFSDFRNHRIRKI-LRNGTIVTIAGTGEQGFS------GD-G 196

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA--A 886
           G      L  P GV+ + N ++Y+ D  +H+I+K+      + T+AG G+ GF      A
Sbjct: 197 GPAINAKLNTPCGVFVSNNDEVYIVDYKSHRIRKM-LQDGTIITIAGTGEQGFGGDGGPA 255

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934
            +AQLS P G+  +    ++I D+ N  IR +  N     +    +KG
Sbjct: 256 TSAQLSHPCGVFVSSTNEVYITDSYNYRIRKILRNGNITTIAGTGVKG 303



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 6/94 (6%)

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA---- 885
           M ++ +L  P GV+ A N +IY+AD+ NH+++K+      + T+AGIG+   +  +    
Sbjct: 27  MATDAMLNCPGGVFVAPNDEIYIADNLNHRVRKI-LKDGTIVTIAGIGEEEGEGFSGDGG 85

Query: 886 -ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            A +AQ + P  +  +    ++I+D  N  IR +
Sbjct: 86  PATSAQFNHPCDVFVSSTNEVYISDFGNYRIRKI 119


>gi|334124099|ref|ZP_08498108.1| cytochrome c biogenesis protein [Enterobacter hormaechei ATCC
           49162]
 gi|333389098|gb|EGK60264.1| cytochrome c biogenesis protein [Enterobacter hormaechei ATCC
           49162]
          Length = 396

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +    KKY+     V
Sbjct: 253 LPSLDGGTGWVNGDPVT-SDSLRGKVVLIDFWTWDCINCQHTLPYVRDWAKKYQSQGLVV 311

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK + +++NAV ++ + + VV D +  +W   G   WP        G+L 
Sbjct: 312 IGVHTPEYPWEKPISSVKNAVNKWQLPYRVVTDNNYKIWSAFGNQYWPAHYYFDAKGQLR 371

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 372 YTSFGEGNYDKQEAVIQQLL 391


>gi|148657387|ref|YP_001277592.1| HAD family hydrolase [Roseiflexus sp. RS-1]
 gi|148569497|gb|ABQ91642.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Roseiflexus sp.
           RS-1]
          Length = 221

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 6/192 (3%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEA-NFLGGVASVKG 137
           + A++FD DG++ ++E P      + +   G ++  E ++  +GT +  +  G + S+ G
Sbjct: 3   LKALIFDFDGLILDTETPDFIVLSEQYRRYGADLRPERWMHGLGTTDGYDPYGELESLTG 62

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDA 197
           V   D EA ++   E Y+   A+       PG  ELI   + +G+++AVASSA R  V+ 
Sbjct: 63  VI-LDREALRREHRERYVALCAQQPLQ---PGVRELIVAARKRGIRLAVASSASREWVEG 118

Query: 198 NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKA 257
            L    +  S       +D    +KPAPD+FLSA+  L+V    C+V+ED+  G++AA+A
Sbjct: 119 WLEHHRIRDSFHCVRTRSDGLR-VKPAPDLFLSAAACLDVAPESCVVLEDSPNGMRAAEA 177

Query: 258 AQMRCIAVTTTL 269
           A MRCIAV   L
Sbjct: 178 AGMRCIAVPVAL 189


>gi|398385435|ref|ZP_10543456.1| thiol-disulfide isomerase-like thioredoxin [Sphingobium sp. AP49]
 gi|397720386|gb|EJK80943.1| thiol-disulfide isomerase-like thioredoxin [Sphingobium sp. AP49]
          Length = 361

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498
           WL   P      L+GKVV+++FWTY CIN +  LP L   +++Y D    VVG+H+ +F 
Sbjct: 55  WLTPVPGGVA-SLRGKVVLVNFWTYSCINSLRALPYLRAWQERYGDKGLVVVGIHAPEFR 113

Query: 499 NEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHR 558
            E D   +R A  R G+ +P + D D  +W+  G   WP F  +   G++     GEG  
Sbjct: 114 FEHDPAKVRQATARLGVGYPNLQDNDYAVWQAFGNQGWPGFYFIDAKGQVRGYRVGEGDY 173

Query: 559 KDLDDLVEAAL 569
            + + L+   L
Sbjct: 174 AESEQLIRRLL 184


>gi|262044455|ref|ZP_06017515.1| cytochrome c biogenesis protein, partial [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259038209|gb|EEW39420.1| cytochrome c biogenesis protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 310

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 398 FEQTEGGSSQSERIQQFVNYISDVENRKT-TPI--------VPEFPAKLDWLNTAPLQFR 448
           + Q+ GG SQ+   Q+    +   E + +  PI        +P       W+N+  L   
Sbjct: 127 YLQSAGGLSQALE-QRLAARLPQPEQKTSLQPIAAPQPSSAMPSLAGGSAWINSPALTPE 185

Query: 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508
           R L+GKVV++DFWT  CINC H LP +     KY+     V+GVH+ ++  E+ L  +R 
Sbjct: 186 R-LRGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVVIGVHTPEYPWERSLPLLRQ 244

Query: 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568
           AV  + I++PVV D +  +W   G   WP   +    G+L     GEG     + +++  
Sbjct: 245 AVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLRYTAFGEGDYARQEQVIQQL 304

Query: 569 L 569
           L
Sbjct: 305 L 305


>gi|156743694|ref|YP_001433823.1| HAD family hydrolase [Roseiflexus castenholzii DSM 13941]
 gi|156235022|gb|ABU59805.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Roseiflexus
           castenholzii DSM 13941]
          Length = 229

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 6/198 (3%)

Query: 73  ESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGT-GEANFLGG 131
           E K   + A++FD DG++ ++E P      + +   G E+  E ++  +GT G  +  G 
Sbjct: 6   EKKGVMLQALIFDFDGLILDTETPDFIVLSEQYRRFGAELLPERWVHGLGTTGGYDPYGE 65

Query: 132 VASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD 191
           + ++ G +  D EA ++   E Y+   A        PG  E+I   +++G+++AVASSA 
Sbjct: 66  LEALTGAR-LDREALRREHRERYI---ALCEQQPLQPGVREVIIAARARGIRLAVASSAT 121

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           R  V+  L    +  + F  + +      +KPAPD+FLSA+  L+ P   C+V+ED+  G
Sbjct: 122 REWVEGWLERHAIR-AYFACVRTRSDGVRVKPAPDLFLSAAACLDAPPEWCVVLEDSPNG 180

Query: 252 VQAAKAAQMRCIAVTTTL 269
           ++AA AA MRC+AV   L
Sbjct: 181 IRAAAAAGMRCVAVPVAL 198


>gi|253574451|ref|ZP_04851792.1| beta-phosphoglucomutase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251846156|gb|EES74163.1| beta-phosphoglucomutase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 219

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 5/189 (2%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A LFD+DGVL ++ +    A   + AE+G E T +D     G      L  + SV G+
Sbjct: 4   IQACLFDLDGVLVDTAKYHYLAWKRLAAELGFEFTEQDNEKLKGVSRMASLDILLSVGGL 63

Query: 139 KGFDS--EAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
           +  D+  +   +R    Y++  ++ ++    PGALE + QC+  GLK A+ S++    + 
Sbjct: 64  QLEDNVKQELAERKNNWYVEYISQMDASEILPGALEFLQQCRENGLKTALGSASKNAPI- 122

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
             L   GL    FDAI+      + KP P++FL  +  L V    C+V EDA AG++AA+
Sbjct: 123 -ILRNTGL-TPYFDAIIDGTRTSSAKPDPEVFLLGATELGVAPEACVVFEDAEAGIEAAR 180

Query: 257 AAQMRCIAV 265
            A MRCI +
Sbjct: 181 RAGMRCIGI 189


>gi|392942710|ref|ZP_10308352.1| haloacid dehalogenase superfamily protein, subfamily IA, variant 3
           with third motif having DD or ED [Frankia sp. QA3]
 gi|392286004|gb|EIV92028.1| haloacid dehalogenase superfamily protein, subfamily IA, variant 3
           with third motif having DD or ED [Frankia sp. QA3]
          Length = 236

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 2/189 (1%)

Query: 80  SAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVK 139
           +AVLFDMDG+L ++E    RA  D+ A +G   T +     MG G    L  + S+ GV 
Sbjct: 15  AAVLFDMDGLLVDTERLWTRAQEDLAAHLGGVFTPQIKAALMGRGPDTALHLMLSLLGVD 74

Query: 140 GFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANL 199
           G     A        ++ +A P + +  PGA++L+    ++G+ +A+ SS+ R+ +D  L
Sbjct: 75  GSRFAEAADFVMGRIVELFAAPGAIVARPGAVDLLGALAAQGVPLALVSSSARVLMDHVL 134

Query: 200 AAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQ 259
            A G   + F   V+ D     KP P+ +L AS++L VP + C+V+ED+ +G  A  AA 
Sbjct: 135 GAVG--AARFQVSVAGDEVVRGKPDPEPYLRASRLLAVPPARCVVLEDSASGATAGLAAG 192

Query: 260 MRCIAVTTT 268
              + V +T
Sbjct: 193 CVTVLVPST 201


>gi|320105416|ref|YP_004181006.1| NHL repeat containing protein [Terriglobus saanensis SP1PR4]
 gi|319923937|gb|ADV81012.1| NHL repeat containing protein [Terriglobus saanensis SP1PR4]
          Length = 822

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 133/268 (49%), Gaps = 29/268 (10%)

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718
           P G+AY+A  N+ Y AD  NH +R++      + T+AG G +G    GG   TS  L+SP
Sbjct: 64  PAGIAYDASGNM-YFADLNNHVVRKVSAAG-IITTVAGTGEQGFAGDGGSA-TSAWLDSP 120

Query: 719 WDVCYKPINEKVYIAMAGQHQIWEHS-----TVDGVTRA-FSGDGYERNLNGSSSLNTSF 772
             V    +   +YI+ +   +I   S     T+ G   A FSGDG      G++ L T  
Sbjct: 121 VGVAVDRVGN-LYISDSHNQRIRRVSGGTIATIAGTGVAGFSGDG------GAAVLAT-L 172

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
           + P+G+++      +YVAD+++  IR    K  G+ +      +       F    G  +
Sbjct: 173 SHPTGLAVDTG-GNLYVADTDNHRIR----KISGTTI----TTVAGSGEQGFAGDGGPAT 223

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQ 890
              L  P GV     G +Y+AD++N +I+ +  A   +ST+AG G   +    G+A+AA 
Sbjct: 224 AAWLDSPDGVAVDATGNLYIADTHNQRIRVVS-AEGTISTIAGNGSRAYAGDGGSAVAAS 282

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           L+ P G+     GN++ AD++NN IR +
Sbjct: 283 LARPRGLSVDALGNIYFADSDNNRIRLI 310



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 19/229 (8%)

Query: 709 KGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL 768
           + T+  L SP  + Y   +  +Y A    H + + S   G+    +G G E+   G    
Sbjct: 55  EATTAPLASPAGIAYDA-SGNMYFADLNNHVVRKVSAA-GIITTVAGTG-EQGFAGDGGS 111

Query: 769 NTSFAQPSGISLSPDFM-EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827
            TS    S + ++ D +  +Y++DS +  IR ++   GG+     G       +  F   
Sbjct: 112 ATSAWLDSPVGVAVDRVGNLYISDSHNQRIRRVS---GGTIATIAGT-----GVAGFSGD 163

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GA 885
            G      L HP G+     G +YVAD+ NH+I+K+  +   ++T+AG G+ GF    G 
Sbjct: 164 GGAAVLATLSHPTGLAVDTGGNLYVADTDNHRIRKI--SGTTITTVAGSGEQGFAGDGGP 221

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934
           A AA L  P G+     GNL+IADT+N  IR +     E  + T+   G
Sbjct: 222 ATAAWLDSPDGVAVDATGNLYIADTHNQRIRVV---SAEGTISTIAGNG 267



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 145/340 (42%), Gaps = 43/340 (12%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDA 654
           T+PL  P  +A D   N  F   +NH  +V        I  +  +GE+G     GS   A
Sbjct: 58  TAPLASPAGIAYDASGNMYFADLNNH--VVRKVSAAGIITTVAGTGEQGFAGDGGSATSA 115

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714
             + P G+A +   NL Y++D+ N  +R +     T+ T+AG G  G    GG       
Sbjct: 116 WLDSPVGVAVDRVGNL-YISDSHNQRIRRVS--GGTIATIAGTGVAGFSGDGGAA-VLAT 171

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS--F 772
           L+ P  +        +Y+A    H+I + S     T A SG   E+   G     T+   
Sbjct: 172 LSHPTGLAVD-TGGNLYVADTDNHRIRKISGTTITTVAGSG---EQGFAGDGGPATAAWL 227

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALN-------LKTGGSRLLAGGDPIFPDNLFKFG 825
             P G+++      +Y+AD+ +  IR ++       +   GSR  AG             
Sbjct: 228 DSPDGVAVDAT-GNLYIADTHNQRIRVVSAEGTISTIAGNGSRAYAG------------- 273

Query: 826 DRDGMGSEVL--LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
             DG GS V   L  P G+     G IY ADS N++I+ L   +  ++T+AG G  G   
Sbjct: 274 --DG-GSAVAASLARPRGLSVDALGNIYFADSDNNRIR-LIATTGIITTVAGNGSQGDGG 329

Query: 884 GA--ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
               AL A L  P        G   ++DT+N+IIR + LN
Sbjct: 330 DGGSALDATLDTPRATAVRALGIFDLSDTHNDIIREVGLN 369


>gi|110597341|ref|ZP_01385629.1| HAD-superfamily hydrolase subfamily IA, variant
           3:Beta-phosphoglucomutase hydrolase [Chlorobium
           ferrooxidans DSM 13031]
 gi|110341177|gb|EAT59645.1| HAD-superfamily hydrolase subfamily IA, variant
           3:Beta-phosphoglucomutase hydrolase [Chlorobium
           ferrooxidans DSM 13031]
          Length = 234

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 20/205 (9%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG--- 137
           A +FDMDGVL ++      + V++F + G+E          G     +L   A +KG   
Sbjct: 9   AFIFDMDGVLTDNMRFHADSWVELFRDFGLE----------GLDADRYLVETAGMKGHDV 58

Query: 138 VKGF------DSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD 191
           ++ F      ++EAA+    + +L +          PG    ++   +  +++ + + A 
Sbjct: 59  LRYFLDPEISEAEAARLTELKDFLYRIMSRELIKPMPGLELFLDHAAASRVQLGIGTGAG 118

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
              +D  L   G+    F AIV      N KPAPDIFL A+ +L VP S CIV EDAL G
Sbjct: 119 PRNIDYVLDLLGI-AGRFQAIVDPSQVINGKPAPDIFLRAAGLLEVPPSNCIVFEDALPG 177

Query: 252 VQAAKAAQMRCIAVTTTLSEERLKE 276
           VQAA++A M+C+AVTTT S +  +E
Sbjct: 178 VQAARSAGMKCVAVTTTNSADAFRE 202


>gi|428943602|ref|ZP_19016471.1| putative cytochrome c biogenesis protein, partial [Klebsiella
           pneumoniae VA360]
 gi|426296411|gb|EKV59051.1| putative cytochrome c biogenesis protein, partial [Klebsiella
           pneumoniae VA360]
          Length = 170

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N+  L   R LKGKVV++DFWT  CINC H LP +     KY+     V
Sbjct: 27  MPSLAGGSAWINSPALTPER-LKGKVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVV 85

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ L  +R AV  + I++PVV D +  +W   G   WP   +    G+L 
Sbjct: 86  IGVHTPEYPWERSLPLLRQAVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLR 145

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 146 YTAFGEGDYARQEQVIQQLL 165


>gi|15893920|ref|NP_347269.1| phosphatase [Clostridium acetobutylicum ATCC 824]
 gi|337735849|ref|YP_004635296.1| phosphatase [Clostridium acetobutylicum DSM 1731]
 gi|15023504|gb|AAK78609.1|AE007578_7 Predicted phosphatase [Clostridium acetobutylicum ATCC 824]
 gi|336292317|gb|AEI33451.1| phosphatase [Clostridium acetobutylicum DSM 1731]
          Length = 215

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 9/189 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGVL +SE      A  +F E+ + +T  ++  F+GT        +     +
Sbjct: 2   IKAVIFDMDGVLIDSEPLHLDYAFKLFKELNITMTPNEYSKFIGTTSLYMWSNIKDTYNL 61

Query: 139 KG-FDSEAAKKR--FFEIYLDKYAKPNSGIGFPGAL-ELINQCKSKGLKVAVASSADRIK 194
           +   +S   K+R  FFE      + PN+ I     + EL+   K    K AVASS+  ++
Sbjct: 62  ENTVESLINKERNGFFEFL----SSPNTNIKPIDHIPELLGALKENNFKTAVASSS-PMR 116

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           V   +         F+ +V+ D  E  KP PDIFL A+K L+V   +C+VIED+  GV A
Sbjct: 117 VIKYIINNFELAKQFNELVTGDYVERSKPNPDIFLYAAKKLDVSPEQCVVIEDSHNGVLA 176

Query: 255 AKAAQMRCI 263
           AK A M+CI
Sbjct: 177 AKNAGMKCI 185


>gi|406957940|gb|EKD85764.1| phosphatase/phosphohexomutase [uncultured bacterium]
          Length = 220

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 4/187 (2%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVAS-VK 136
           ++ AV+FDMDGV+ +SE  + +     F  +G++ TV+    F GT        V     
Sbjct: 4   RIKAVIFDMDGVIVDSEPLNDQHMQIHFQRIGIKFTVDYVEQFRGTNSKTVWTKVKQDFN 63

Query: 137 GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
             +  D    K R    Y+D        +   G  EL+ +      K AV SSA   ++D
Sbjct: 64  LTESLDELITKSR--ASYIDFLKNKKDIVPVSGVKELLQRLGHNHFKTAVTSSASPKRID 121

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
             L    +  ++FD IVS D   + KPAPD++L  ++ L +P ++C+VIEDA  GV+AAK
Sbjct: 122 LLLDVCRIK-NLFDIIVSTDDVVHGKPAPDVYLKTAERLKIPPNQCVVIEDAENGVKAAK 180

Query: 257 AAQMRCI 263
           +A M+ I
Sbjct: 181 SAGMKVI 187


>gi|443469254|ref|ZP_21059433.1| DipZ protein [Pseudomonas pseudoalcaligenes KF707]
 gi|442898600|gb|ELS25262.1| DipZ protein [Pseudomonas pseudoalcaligenes KF707]
          Length = 407

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN   L     L+GKVV++DFWTY CINC + LP +    +KY+D    V
Sbjct: 258 MPSLDGATQWLNGPSLDVE-GLRGKVVLVDFWTYDCINCRNSLPHVNQWARKYRDQGLVV 316

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ LE ++ A+ R  + HPV  D    +W       WP    +   G++ 
Sbjct: 317 IGVHTPEYPYERILENVQAAMRRLDVHHPVAIDNQYRIWNAFSNRYWPAHYFIDARGQVR 376

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG   + + ++ A L
Sbjct: 377 HLHVGEGDYAEQEAVIRALL 396


>gi|304315671|ref|YP_003850816.1| HAD-superfamily hydrolase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777173|gb|ADL67732.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 219

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 13/190 (6%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEA---NFLGGVASVKG 137
           AV+FDMDGVL +SE    +   ++F E+G  V+ E+ + F+GT       ++    +V  
Sbjct: 4   AVIFDMDGVLIDSEPLHIQLEEEIFKEIGANVSFEEHISFVGTTSHYMWEYVKNKCNVPL 63

Query: 138 VKGFDSEAAKKRFFEIYLDKY---AKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
                 E  +KR+ + Y+ K+    KP  G+G     EL+ +  SK +K+AVASS+    
Sbjct: 64  TVEELVEMDRKRYID-YISKHDDAVKPIEGVG-----ELVKELYSKKVKLAVASSSPIDV 117

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           ++  +    L    F+ +VS D  +  KP PDIFL A++ LNV   +CIV+ED+  GV A
Sbjct: 118 IELVVKRLKLK-DYFNELVSGDFVKRSKPYPDIFLYAAEKLNVVPEKCIVVEDSNKGVLA 176

Query: 255 AKAAQMRCIA 264
           AK+A M+ + 
Sbjct: 177 AKSAGMKVVG 186


>gi|262275844|ref|ZP_06053653.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Grimontia hollisae CIP
           101886]
 gi|262219652|gb|EEY70968.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Grimontia hollisae CIP
           101886]
          Length = 216

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 12/218 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A +FDMDG+L +SE   + A + VF ++GV V+ +D +   G      +      +G 
Sbjct: 2   IQAAIFDMDGLLVDSEPFWQEAQLAVFHDIGVNVSRQDTIDTTGIRIDQIVKHYYETQGW 61

Query: 139 KGFDSEAAKKRFFE--IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
           +G   EA      +  I L    KP      PG +  +  CK   L++A+ASS+    ++
Sbjct: 62  EGPSCEAVCNMILDKVIELVSIHKPM----MPGVIHALTLCKEANLRIALASSSPLKLIN 117

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
           A L A  L    F+   SA+  +  KP P+++L+A++ L +    C+  ED+ AG+ AAK
Sbjct: 118 ATLTALELD-DWFEQRYSAEHLKYGKPHPEVYLNAAEGLGIDPQHCVAFEDSFAGLLAAK 176

Query: 257 AAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294
           +AQMR I V      E      P  +  ++   SLN++
Sbjct: 177 SAQMRTIVVP-----EHQVADKPQWVISDVKLRSLNEL 209


>gi|345018289|ref|YP_004820642.1| HAD-superfamily hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|344033632|gb|AEM79358.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 226

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 10/190 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A++FDMDGV+ +SE    +   ++F  +GVE++ ++ L F+GT        +      
Sbjct: 2   IKAIIFDMDGVIIDSEPIHIKLEEELFKSLGVEISEDEHLTFVGTSSYYMWRKIK----- 56

Query: 139 KGFDSEAAKKRFFEI----YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           + F+   + +   E+    YL+   K    I   G  E + +   K  K+AVASS+    
Sbjct: 57  ERFNLSQSVEELVEVDRKRYLEHVLKTGEIIPIEGITETVKKLFEKEYKLAVASSSPIDV 116

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           ++  +   G+    F+ +VS D  +N KPAPDIFL  +  L V   EC+VIED+  GV  
Sbjct: 117 IELVVKKLGID-KCFEVLVSGDYVKNSKPAPDIFLYTADKLKVKPHECVVIEDSYNGVYG 175

Query: 255 AKAAQMRCIA 264
           AK A M+ I 
Sbjct: 176 AKKAGMKVIG 185


>gi|283779991|ref|YP_003370746.1| NHL repeat containing protein [Pirellula staleyi DSM 6068]
 gi|283438444|gb|ADB16886.1| NHL repeat containing protein [Pirellula staleyi DSM 6068]
          Length = 364

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 29/275 (10%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFN 657
           L  P ++  D   N +F+   N   I   D     I  I  SG+EG     G   +A F+
Sbjct: 106 LNEPYEVRFDSHGNMIFVEMKNF-VIRKVDAKTGIISTIAGSGKEGFAGDGGPAKEAVFS 164

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717
            P  +A +A  N+ YV D  NH +R+ID     + T+AGNG K    +G   GT  LL  
Sbjct: 165 IPHSIALDADDNI-YVCDLGNHRIRKIDAKTGLISTIAGNGGKTLPKEGKIDGTMSLL-G 222

Query: 718 PWDVCYKPINEKV-YIAMAGQHQIW-------EHSTVDGV-TRAFSGDGYERNLNGSSSL 768
           P  VC   I++ V +IA+   H +W       E + + G   + FSGD       G  + 
Sbjct: 223 PRAVC---IDKNVMWIALREGHSVWKLNLATSELTHIAGTGKKGFSGD-------GGPAK 272

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
           + +F  P G+++ PD   + V D+E+  IR +++K G    + G  P             
Sbjct: 273 DATFDGPKGVAVCPDG-GVVVVDTENHVIRKIDVKAGTISTVPGHTP----KKAGGDGDG 327

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
           G  ++  +  P G+   K+G IY+ D+ NH+++++
Sbjct: 328 GDATKATMNRPHGICVDKDGSIYIGDTLNHRVRRV 362



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 15/254 (5%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           LY+ +  NH +R +D     + T+AG+G  G    GG   T  LLN P++V +      +
Sbjct: 63  LYITEVRNHRVRRLDLKTGAMTTVAGSGKMGYAGDGGPA-TEALLNEPYEVRFDSHGNMI 121

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL-NGSSSLNTSFAQPSGISLSPDFMEIYV 789
           ++ M     I +     G+    +G G E    +G  +    F+ P  I+L  D   IYV
Sbjct: 122 FVEMK-NFVIRKVDAKTGIISTIAGSGKEGFAGDGGPAKEAVFSIPHSIALDADD-NIYV 179

Query: 790 ADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
            D  +  IR ++ KTG    +AG G    P    K G  DG  S   L  P  V   KN 
Sbjct: 180 CDLGNHRIRKIDAKTGLISTIAGNGGKTLP----KEGKIDGTMS---LLGPRAVCIDKN- 231

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQLSEPAGIIEAQNGNLF 906
            +++A    H + KL+ A++ ++ +AG GK GF    G A  A    P G+    +G + 
Sbjct: 232 VMWIALREGHSVWKLNLATSELTHIAGTGKKGFSGDGGPAKDATFDGPKGVAVCPDGGVV 291

Query: 907 IADTNNNIIRYLDL 920
           + DT N++IR +D+
Sbjct: 292 VVDTENHVIRKIDV 305



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 26/315 (8%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFNRPQGLAYNAKKNLLY 672
           L+I++  ++R+   DL    +  +  SG+ G     G   +A  N P  + +++  N+++
Sbjct: 63  LYITEVRNHRVRRLDLKTGAMTTVAGSGKMGYAGDGGPATEALLNEPYEVRFDSHGNMIF 122

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           V + +N  +R++D     + T+AG+G +G    GG      + + P  +     ++ +Y+
Sbjct: 123 V-EMKNFVIRKVDAKTGIISTIAGSGKEGFAGDGGPA-KEAVFSIPHSIALDA-DDNIYV 179

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDG-----YERNLNGSSSLNTSFAQPSGISLSPDFMEI 787
              G H+I +     G+    +G+G      E  ++G+ SL      P  + +  + M  
Sbjct: 180 CDLGNHRIRKIDAKTGLISTIAGNGGKTLPKEGKIDGTMSL----LGPRAVCIDKNVM-- 233

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           ++A  E  S+  LNL T     +AG           F    G   +     P GV    +
Sbjct: 234 WIALREGHSVWKLNLATSELTHIAG------TGKKGFSGDGGPAKDATFDGPKGVAVCPD 287

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAG----IGKAGFKDGAALAAQLSEPAGIIEAQNG 903
           G + V D+ NH I+K+D  +  +ST+ G            G A  A ++ P GI   ++G
Sbjct: 288 GGVVVVDTENHVIRKIDVKAGTISTVPGHTPKKAGGDGDGGDATKATMNRPHGICVDKDG 347

Query: 904 NLFIADTNNNIIRYL 918
           +++I DT N+ +R +
Sbjct: 348 SIYIGDTLNHRVRRV 362



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            + T+   P G+ + PD   +Y+ +  +  +R L+LKTG    +AG           +  
Sbjct: 44  GVETNVGDPFGVEIGPDG-ALYITEVRNHRVRRLDLKTGAMTTVAG------SGKMGYAG 96

Query: 827 RDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DG 884
             G  +E LL  P  V    +G +   +  N  I+K+D  +  +ST+AG GK GF    G
Sbjct: 97  DGGPATEALLNEPYEVRFDSHGNMIFVEMKNFVIRKVDAKTGIISTIAGSGKEGFAGDGG 156

Query: 885 AALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            A  A  S P  I    + N+++ D  N+ IR +D
Sbjct: 157 PAKEAVFSIPHSIALDADDNIYVCDLGNHRIRKID 191



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-- 882
           G   G+G E  +  P GV    +G +Y+ +  NH++++LD  +  ++T+AG GK G+   
Sbjct: 38  GPASGLGVETNVGDPFGVEIGPDGALYITEVRNHRVRRLDLKTGAMTTVAGSGKMGYAGD 97

Query: 883 DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            G A  A L+EP  +    +GN+   +  N +IR +D
Sbjct: 98  GGPATEALLNEPYEVRFDSHGNMIFVEMKNFVIRKVD 134



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749
           T+ T+AG G K +D      G    +  P+ V   P +  +YI     H++       G 
Sbjct: 25  TIDTVAGTG-KPADGPASGLGVETNVGDPFGVEIGP-DGALYITEVRNHRVRRLDLKTGA 82

Query: 750 TRAFSGDG-YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
               +G G      +G  +      +P  +        I+V + ++  IR ++ KTG   
Sbjct: 83  MTTVAGSGKMGYAGDGGPATEALLNEPYEVRFDSHGNMIFV-EMKNFVIRKVDAKTGIIS 141

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
            +AG           F    G   E +   P  +    +  IYV D  NH+I+K+D  + 
Sbjct: 142 TIAG------SGKEGFAGDGGPAKEAVFSIPHSIALDADDNIYVCDLGNHRIRKIDAKTG 195

Query: 869 RVSTLAGIG 877
            +ST+AG G
Sbjct: 196 LISTIAGNG 204


>gi|290995104|ref|XP_002680171.1| predicted protein [Naegleria gruberi]
 gi|284093791|gb|EFC47427.1| predicted protein [Naegleria gruberi]
          Length = 928

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 28/298 (9%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A  N P G+ + +  N +Y+AD  N  +R+I   N  + T+AGNGT G     G    +Q
Sbjct: 8   AQLNSPFGV-FVSSNNEVYIADYGNQRIRKI-LKNGNIVTIAGNGTAGFRGDNGPATNAQ 65

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQH---QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT 770
           L N P+ V +   N +VYIA    H   +I E+  +  VT A +G G     NG ++ N 
Sbjct: 66  LYN-PYSV-FVSSNNEVYIADFSNHRIRKILENGKI--VTIAGNGTGGFSGDNGPAT-NA 120

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM 830
               P  + +S +  E+Y+ D  +  IR + LK G    +AG      +    F   +G 
Sbjct: 121 QLNNPYSVFVSSN-NEVYIVDYNNHRIRKI-LKNGNIVTIAG------NGTGGFSGDNGP 172

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQ 890
            +   L +P+GV+ + N ++Y+AD YNH+I+K+    N V T+AG G AGF   +    +
Sbjct: 173 ATNAQLNNPMGVFVSSNNEVYIADYYNHRIRKILENGNIV-TIAGNGTAGFSGDSPFDIR 231

Query: 891 LSEPAG-IIEAQNGNLFIADTNNNIIRYLDLNKE-EPELQTLELKGVQPPTPKSRSPK 946
                G  +   NGNL      ++ I + +L K    EL  L + G  P   K+ SPK
Sbjct: 232 TYPHIGNKLLTGNGNL------HSKIEFHNLKKHSRDELFGLPIYGFIPLIEKT-SPK 282



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 55/253 (21%)

Query: 631 DGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN 688
           +GN IV I  +G  G R  +G   +A    P  + + +  N +Y+ D  NH +R+I   N
Sbjct: 350 NGN-IVTIAGNGTAGFRGDNGPATNAQLYNPYSV-FVSSNNEVYIVDYNNHRIRKI-LKN 406

Query: 689 DTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDG 748
             + T+AGNGT G     G    +QL N+P  V +                         
Sbjct: 407 GNIVTIAGNGTGGFSGDNGPATNAQL-NNPMVVIHL------------------------ 441

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
                             + N     P  + +S +  E+Y+ D  +  IR + L+ G   
Sbjct: 442 ----------------GPATNAQLNNPYSVFVSSN-NEVYIVDYNNHRIRKI-LENGNIV 483

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
            +AG      +    F   +G  +   L +P+GV+ + N ++Y+AD YNH+I+K+    N
Sbjct: 484 TIAG------NGTGGFSGDNGPATNAQLNNPMGVFVSSNNEVYIADYYNHRIRKILENGN 537

Query: 869 RVSTLAGIGKAGF 881
            V T+AG G AGF
Sbjct: 538 IV-TIAGNGTAGF 549



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 11/204 (5%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKN 669
           NN ++I+D  + RI     +GN IV I  +G  G R  +G   +A    P  + + +  N
Sbjct: 21  NNEVYIADYGNQRIRKILKNGN-IVTIAGNGTAGFRGDNGPATNAQLYNPYSV-FVSSNN 78

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            +Y+AD  NH +R+I   N  + T+AGNGT G     G    +Q LN+P+ V +   N +
Sbjct: 79  EVYIADFSNHRIRKI-LENGKIVTIAGNGTGGFSGDNGPATNAQ-LNNPYSV-FVSSNNE 135

Query: 730 VYIAMAGQHQIWE-HSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           VYI     H+I +     + VT A +G G     NG ++ N     P G+ +S +  E+Y
Sbjct: 136 VYIVDYNNHRIRKILKNGNIVTIAGNGTGGFSGDNGPAT-NAQLNNPMGVFVSSN-NEVY 193

Query: 789 VADSESSSIRALNLKTGGSRLLAG 812
           +AD  +  IR + L+ G    +AG
Sbjct: 194 IADYYNHRIRKI-LENGNIVTIAG 216



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 31/188 (16%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           VT A +G    R  NG ++ N     P  + +S +  E+Y+ D  +  IR + LK G   
Sbjct: 354 VTIAGNGTAGFRGDNGPAT-NAQLYNPYSVFVSSN-NEVYIVDYNNHRIRKI-LKNGNIV 410

Query: 809 LLAGG------------------DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI 850
            +AG                   +P+   +L       G  +   L +P  V+ + N ++
Sbjct: 411 TIAGNGTGGFSGDNGPATNAQLNNPMVVIHL-------GPATNAQLNNPYSVFVSSNNEV 463

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIA 908
           Y+ D  NH+I+K+    N V T+AG G  GF   +G A  AQL+ P G+  + N  ++IA
Sbjct: 464 YIVDYNNHRIRKILENGNIV-TIAGNGTGGFSGDNGPATNAQLNNPMGVFVSSNNEVYIA 522

Query: 909 DTNNNIIR 916
           D  N+ IR
Sbjct: 523 DYYNHRIR 530



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 66/320 (20%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKN 669
           NN ++I D N++RI     +GN IV I  +G  G    +G   +A  N P G+ + +  N
Sbjct: 133 NNEVYIVDYNNHRIRKILKNGN-IVTIAGNGTGGFSGDNGPATNAQLNNPMGV-FVSSNN 190

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDV-CYKPINE 728
            +Y+AD  NH +R+I   N  + T+AGNGT G  + G         +SP+D+  Y  I  
Sbjct: 191 EVYIADYYNHRIRKI-LENGNIVTIAGNGTAG--FSG---------DSPFDIRTYPHIGN 238

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP--SGISL----SP 782
           K+       H   E   +   +R                 +  F  P    I L    SP
Sbjct: 239 KLLTGNGNLHSKIEFHNLKKHSR-----------------DELFGLPIYGFIPLIEKTSP 281

Query: 783 DFMEIYVADS----ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
            F  I   +      SSS + +  K   S        I+  N  KF   + +  +VL   
Sbjct: 282 KFSNILKNEKILCLMSSSQQEIIQKLIDSL-------IYDKNKVKFNKEEML--DVLF-- 330

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAG 896
            LG++  KNG+          +K+    +  + T+AG G AGF+  +G A  AQL  P  
Sbjct: 331 ILGLF--KNGEFI-------DLKRSLTKNGNIVTIAGNGTAGFRGDNGPATNAQLYNPYS 381

Query: 897 IIEAQNGNLFIADTNNNIIR 916
           +  + N  ++I D NN+ IR
Sbjct: 382 VFVSSNNEVYIVDYNNHRIR 401



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAAL 887
           + +   L  P GV+ + N ++Y+AD  N +I+K+    N V T+AG G AGF+  +G A 
Sbjct: 4   LATSAQLNSPFGVFVSSNNEVYIADYGNQRIRKILKNGNIV-TIAGNGTAGFRGDNGPAT 62

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            AQL  P  +  + N  ++IAD +N+ IR
Sbjct: 63  NAQLYNPYSVFVSSNNEVYIADFSNHRIR 91



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 29/170 (17%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQ-----GLAY 664
           NN ++I D N++RI     +GN IV I  +G  G    +G   +A  N P      G A 
Sbjct: 387 NNEVYIVDYNNHRIRKILKNGN-IVTIAGNGTGGFSGDNGPATNAQLNNPMVVIHLGPAT 445

Query: 665 NAK-----------KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           NA+            N +Y+ D  NH +R+I   N  + T+AGNGT G     G    +Q
Sbjct: 446 NAQLNNPYSVFVSSNNEVYIVDYNNHRIRKI-LENGNIVTIAGNGTGGFSGDNGPATNAQ 504

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQH---QIWEHSTVDGV----TRAFSGD 756
            LN+P  V +   N +VYIA    H   +I E+  +  +    T  FSGD
Sbjct: 505 -LNNPMGV-FVSSNNEVYIADYYNHRIRKILENGNIVTIAGNGTAGFSGD 552


>gi|406909052|gb|EKD49392.1| lipoprotein, partial [uncultured bacterium]
          Length = 552

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 168/376 (44%), Gaps = 38/376 (10%)

Query: 587 LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL 646
           L KD +    T  L +   +A+   NNR++I       I   +L+G  + +         
Sbjct: 163 LSKDRE----TETLNWAAGMAL--YNNRIYIIYQGGASIYSANLEGEDMRREAGKYRYPK 216

Query: 647 RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG 706
             GS   +   RP  + +N  K +LY A   N+ L E + V+  VR +AG+     +Y  
Sbjct: 217 IFGSAAVSQIGRPHSIVWNPTKPILYAA--INNQLIEYNTVSGKVRFMAGHPM--DNYVE 272

Query: 707 GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG----YERNL 762
           G+ G+S   ++P D+   P    +YIA    H+I + ST    T   +G G    Y  N 
Sbjct: 273 GQ-GSSVRFSNP-DIDISPDGNWLYIADQYNHRIRKMSTKTKKTEYITGAGEVNFYSPNY 330

Query: 763 ---------NGSSSLNTS----FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
                    +G +  N S    F +PS I ++    + YV DS ++ +R +NL TG +R 
Sbjct: 331 SAYQEGGPCDGETGANKSGCAYFNKPSAIVVNRAGTKAYVTDSGNNMLREINLSTGKTRK 390

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC-AKNGQIYVADSYNHKIKKLDPASN 868
           LAG            G ++G G       P  +   A    +YVAD  NH I++++ A+ 
Sbjct: 391 LAG--------TRSAGFKNGFGPLATFNGPADLDLDAAGANLYVADKGNHAIRRINLATL 442

Query: 869 RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQ 928
            VST+ G GK G+++G+   A L  P GI    N  +F +++ +  IR  +  + +  L 
Sbjct: 443 NVSTVVGKGKPGYQEGSKKTALLQMPTGIEVRGNNMIFWSESGSQRIRMYNTTENQTRLF 502

Query: 929 TLELKGVQPPTPKSRS 944
               K  +   P +RS
Sbjct: 503 AGSGKRGRLTGPSTRS 518



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 23/214 (10%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A FN+P  +  N      YV D+ N+ LREI+      R LAG  T+ + ++ G  G   
Sbjct: 351 AYFNKPSAIVVNRAGTKAYVTDSGNNMLREINLSTGKTRKLAG--TRSAGFKNGF-GPLA 407

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWE--HSTVDGVTRAFSGD-GYERNLNGSSSLNT 770
             N P D+        +Y+A  G H I     +T++  T    G  GY+       S  T
Sbjct: 408 TFNGPADLDLDAAGANLYVADKGNHAIRRINLATLNVSTVVGKGKPGYQE-----GSKKT 462

Query: 771 SFAQ-PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
           +  Q P+GI +  + M I+ ++S S  IR  N     +RL AG          K G   G
Sbjct: 463 ALLQMPTGIEVRGNNM-IFWSESGSQRIRMYNTTENQTRLFAGSG--------KRGRLTG 513

Query: 830 MGSEVLLQHPLGVYC-AKNG-QIYVADSYNHKIK 861
             +      P G+    K+G ++Y+AD YN  IK
Sbjct: 514 PSTRSQFNEPKGLAINPKDGSKLYIADYYNDSIK 547



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 153/383 (39%), Gaps = 78/383 (20%)

Query: 587 LEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL 646
           +E D    + +  LK P   A+ +  + ++ISD+ +NR+V  + +G  + ++G       
Sbjct: 30  VEGDKVSTIVSKGLKLP--EALTVRGDTVYISDTGNNRVVSVNKNGGKLQRVG------- 80

Query: 647 RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG-----NGTKG 701
                     + P+ + +N  K  LYV    +  + EI+   +T R   G      G   
Sbjct: 81  -------GVLSIPRQITWNQDK--LYVVCAGDGTINEINLSTNTSRRYVGGFEDVGGIAI 131

Query: 702 SDYQ-----GGEKG-------------TSQLLNSP-------WDVCYKPINEKVYIAMAG 736
            D +      G++G             T  LL+         W       N ++YI   G
Sbjct: 132 KDSRTMFVAAGKQGVWNELFSVDRSTKTKTLLSKDRETETLNWAAGMALYNNRIYIIYQG 191

Query: 737 QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796
              I+  +      R  +G      + GS+++ +   +P  I  +P    +Y A   ++ 
Sbjct: 192 GASIYSANLEGEDMRREAGKYRYPKIFGSAAV-SQIGRPHSIVWNPTKPILYAA--INNQ 248

Query: 797 IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856
           +   N  +G  R +A G P+  DN       +G GS V   +P          +Y+AD Y
Sbjct: 249 LIEYNTVSGKVRFMA-GHPM--DNYV-----EGQGSSVRFSNPDIDISPDGNWLYIADQY 300

Query: 857 NHKIKKLDPASNRVSTLAGIGKAGFK-------------DGAALA-----AQLSEPAGII 898
           NH+I+K+   + +   + G G+  F              DG   A     A  ++P+ I+
Sbjct: 301 NHRIRKMSTKTKKTEYITGAGEVNFYSPNYSAYQEGGPCDGETGANKSGCAYFNKPSAIV 360

Query: 899 EAQNGN-LFIADTNNNIIRYLDL 920
             + G   ++ D+ NN++R ++L
Sbjct: 361 VNRAGTKAYVTDSGNNMLREINL 383



 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 18/95 (18%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPA 895
           L +P GV     G +Y+AD+YN +I+K++   ++VST+   G            +L E  
Sbjct: 3   LDNPYGVAIDSRGAVYIADTYNGRIRKVE--GDKVSTIVSKG-----------LKLPEA- 48

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTL 930
             +  +   ++I+DT NN  R + +NK   +LQ +
Sbjct: 49  --LTVRGDTVYISDTGNN--RVVSVNKNGGKLQRV 79


>gi|320103824|ref|YP_004179415.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
 gi|319751106|gb|ADV62866.1| NHL repeat containing protein [Isosphaera pallida ATCC 43644]
          Length = 417

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 18/269 (6%)

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           A  N+P    Y+A  NL++ +DT NH L+  +  NDTV  +AG G KG    GG    ++
Sbjct: 92  ARLNQPFDCRYDAVGNLVF-SDTANHQLKRWNQANDTVEVIAGTGRKGFSGDGGPARAAE 150

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY-ERNLNGSSSLNTSF 772
            L+ P+ V   P +  +Y       ++ +     G+    +G G  E + +G  +     
Sbjct: 151 -LDEPYGVAPAP-DGSIYFVDRLNRRVRKIDGATGIITTVAGTGRPETSGDGGPANRAGL 208

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
            +P+G++L P   ++ +AD ++  IR ++L TG     AG              RDG G 
Sbjct: 209 VEPNGLALDPKAEDLLIADVQACRIRVVDLNTGVISTFAG---------TGRKARDGDGG 259

Query: 833 EVLLQHPLG---VYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAAL 887
                  LG   V  A +G +Y+ +   + ++ +DP    ++T+AG G+ G+    G AL
Sbjct: 260 PAQQASILGARAVRVAPDGTVYILEREGNSLRAVDPRDGIITTVAGNGRKGYSGDGGPAL 319

Query: 888 AAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            A  + P  +  +  G + I DT N  IR
Sbjct: 320 EATFNGPKELDVSPEGLVAIVDTENQAIR 348



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 14/251 (5%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSG--EEGLRDGSFDDATFNRPQGLAYNAKKNLLY 672
           ++  D  + R+   D     I  +  +G  E     G  + A    P GLA + K   L 
Sbjct: 165 IYFVDRLNRRVRKIDGATGIITTVAGTGRPETSGDGGPANRAGLVEPNGLALDPKAEDLL 224

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           +AD +   +R +D     + T AG G K  D  GG    + +L +   V   P +  VYI
Sbjct: 225 IADVQACRIRVVDLNTGVISTFAGTGRKARDGDGGPAQQASILGA-RAVRVAP-DGTVYI 282

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
                + +      DG+    +G+G +  + +G  +L  +F  P  + +SP+ + + + D
Sbjct: 283 LEREGNSLRAVDPRDGIITTVAGNGRKGYSGDGGPALEATFNGPKELDVSPEGL-VAIVD 341

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM-GSEVLLQHPLGVYCAKNGQI 850
           +E+ +IR  N KT     LAG       N  +  + DG+  +   L  P G+     G I
Sbjct: 342 TENQAIRLYNPKTRVVTTLAG-------NGQRGREGDGVPATAARLDRPHGIAFGPGGVI 394

Query: 851 YVADSYNHKIK 861
            ++D+ NH+I+
Sbjct: 395 AISDTNNHRIR 405



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK--AGFKDGAALAAQLSE 893
           L  P GV  A +G IY  D  N +++K+D A+  ++T+AG G+       G A  A L E
Sbjct: 151 LDEPYGVAPAPDGSIYFVDRLNRRVRKIDGATGIITTVAGTGRPETSGDGGPANRAGLVE 210

Query: 894 PAGI-IEAQNGNLFIADTNNNIIRYLDLN 921
           P G+ ++ +  +L IAD     IR +DLN
Sbjct: 211 PNGLALDPKAEDLLIADVQACRIRVVDLN 239


>gi|408403757|ref|YP_006861740.1| cytochrome c biogenesis protein, transmembrane region [Candidatus
           Nitrososphaera gargensis Ga9.2]
 gi|408364353|gb|AFU58083.1| putative cytochrome c biogenesis protein, transmembrane region
           [Candidatus Nitrososphaera gargensis Ga9.2]
          Length = 333

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 72/146 (49%), Gaps = 2/146 (1%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     W N+ PL  +  LKGKVVVLD WTY CI C+  +P +  L++KY      VV
Sbjct: 10  PEFRDITGWANSDPLSIK-GLKGKVVVLDCWTYTCIFCLRTIPVMRRLQQKYGKYSLQVV 68

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYG-ISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
             HSA++    D   IR A+ RY  I  P   D +   W   G   WP   ++  NG + 
Sbjct: 69  QAHSAEYHFATDHANIRRALQRYNVIDIPNAFDTNNKTWEAYGNMYWPKHVIIDQNGFIR 128

Query: 550 AQLAGEGHRKDLDDLVEAALLFYGKK 575
            + AG G   D +D +   L   GKK
Sbjct: 129 YEHAGYGGMADFEDAIIELLEEAGKK 154


>gi|401678719|ref|ZP_10810677.1| DipZ Protein [Enterobacter sp. SST3]
 gi|400214047|gb|EJO44975.1| DipZ Protein [Enterobacter sp. SST3]
          Length = 396

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +     KY+     V
Sbjct: 253 LPSLSGGTGWINGDPVT-SESLRGKVVLIDFWTWDCINCQHTLPHVREWATKYQPQGLVV 311

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK L +++NAV ++ + + VV D +  +W       WP        G+L 
Sbjct: 312 IGVHTPEYPWEKPLSSVKNAVKKWQLPYRVVTDNNYQIWNAFVNQYWPAHYYFDAKGQLR 371

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  +  + +++  L
Sbjct: 372 YTAFGEGDYEQQEKVIQQLL 391


>gi|290994196|ref|XP_002679718.1| predicted protein [Naegleria gruberi]
 gi|284093336|gb|EFC46974.1| predicted protein [Naegleria gruberi]
          Length = 762

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 30/310 (9%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKNL 670
           N ++I+D  +N  V   L+   IV I  +G+ G    DG   +A  N P  + + + KN 
Sbjct: 50  NEIYIADQ-YNHRVRKILESGRIVTIAGNGKGGFSGDDGLATNAQLNCPSSV-FVSNKNE 107

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +++AD  NH +R+I   +  + T+AGNG +G     G   TS  LN P  +    +NE V
Sbjct: 108 VFIADQYNHRIRKI-LESGRIVTIAGNGEEGFSGDNG-PATSARLNCPMSIFVSNMNE-V 164

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS-PDFMEIYV 789
           Y   +  +++      +G+    +G+  E   +G S L T+      +SL   D  E+Y 
Sbjct: 165 YFVDSNNNRV-RKILENGIIVTIAGNE-ELGFSGDSILATNAKLNGPVSLHVSDKNEVYF 222

Query: 790 ADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG-SEVLLQHPLGVYCAKNG 848
           A+ +++ IR + L+ G    + G               DG   + V +Q P  V+ +   
Sbjct: 223 AELKNNKIRKI-LRNGFLETVMG---------------DGFSTTSVKVQSPTSVFVSPQN 266

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLF 906
           +IY +D+ +++I+K+    N V T+AG G+ GF    G A  AQL+ P G+    N  ++
Sbjct: 267 EIYFSDNTSNRIRKILENGN-VVTVAGTGQQGFSGDGGPATRAQLACPTGLFVTLNNEIY 325

Query: 907 IADTNNNIIR 916
            AD+ NN IR
Sbjct: 326 FADSANNRIR 335



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 28/288 (9%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR--DGSFDDATFNRPQGLAYNAKKNL 670
           N +FI+D  ++RI    L+   IV I  +GEEG    +G    A  N P  + + +  N 
Sbjct: 106 NEVFIADQYNHRIRKI-LESGRIVTIAGNGEEGFSGDNGPATSARLNCPMSI-FVSNMNE 163

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNSPWDVCYKPINEK 729
           +Y  D+ N+ +R+I   N  + T+AGN   G  + G     T+  LN P  +     NE 
Sbjct: 164 VYFVDSNNNRVRKI-LENGIIVTIAGNEELG--FSGDSILATNAKLNGPVSLHVSDKNE- 219

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYV 789
           VY A    ++I      +G      GDG+       S+ +     P+ + +SP   EIY 
Sbjct: 220 VYFAELKNNKI-RKILRNGFLETVMGDGF-------STTSVKVQSPTSVFVSPQ-NEIYF 270

Query: 790 ADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           +D+ S+ IR + L+ G    +AG G   F       GD  G  +   L  P G++   N 
Sbjct: 271 SDNTSNRIRKI-LENGNVVTVAGTGQQGFS------GD-GGPATRAQLACPTGLFVTLNN 322

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAG 896
           +IY ADS N++I+K+    N V T+AG GK G+   A     L    G
Sbjct: 323 EIYFADSANNRIRKVLENGNIV-TIAGNGKHGYSGDAPFDFSLHPHIG 369



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 19/162 (11%)

Query: 765 SSSLNTS--------FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI 816
           SSS NTS           P G+ +SP   EIY+AD  +  +R + L++G    +AG    
Sbjct: 23  SSSCNTSSYLATDAKLCYPFGVFVSPT-NEIYIADQYNHRVRKI-LESGRIVTIAGNGK- 79

Query: 817 FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI 876
                  F   DG+ +   L  P  V+ +   ++++AD YNH+I+K+   S R+ T+AG 
Sbjct: 80  -----GGFSGDDGLATNAQLNCPSSVFVSNKNEVFIADQYNHRIRKI-LESGRIVTIAGN 133

Query: 877 GKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           G+ GF   +G A +A+L+ P  I  +    ++  D+NNN +R
Sbjct: 134 GEEGFSGDNGPATSARLNCPMSIFVSNMNEVYFVDSNNNRVR 175


>gi|300741371|ref|ZP_07071392.1| protein DipZ [Rothia dentocariosa M567]
 gi|300380556|gb|EFJ77118.1| protein DipZ [Rothia dentocariosa M567]
          Length = 608

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 4/142 (2%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE        NT        ++GKV ++DFW Y CINC    P L  L  KY D    +V
Sbjct: 313 PELAGGTGNFNTENQPSLAHMRGKVTLVDFWAYSCINCQRTAPHLNELYAKYHDYGLEIV 372

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E + + ++  +   GI +PVV D D  +WR      WP   ++   GKL A
Sbjct: 373 GVHTPEYAFEHEGKNVQAGIENLGIKYPVVQDNDYAIWRAYSNRYWPAHYLIDSEGKLRA 432

Query: 551 QLAGEGHRK----DLDDLVEAA 568
              GEG  K     + +L++AA
Sbjct: 433 VHYGEGGHKVTEAQVRELLKAA 454


>gi|451335068|ref|ZP_21905637.1| Thiol-disulfide isomerase and thioredoxin [Amycolatopsis azurea DSM
           43854]
 gi|449422200|gb|EMD27581.1| Thiol-disulfide isomerase and thioredoxin [Amycolatopsis azurea DSM
           43854]
          Length = 584

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 431 PEFPAKLDWLNT---APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPF 487
           P+      W NT   AP+   + L+GKVV+LDFW Y CINC   +P +   +K Y+D   
Sbjct: 291 PDIKGIQQWFNTSGGAPVDLAQ-LRGKVVLLDFWAYSCINCQRSIPHVTAWDKAYRDAGL 349

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            V+GVHS ++  EK+   +R A  ++GI +PV  D +++ W       WP   ++   G 
Sbjct: 350 QVIGVHSPEYAFEKEPGNVRAAADKFGIGYPVALDNNLSTWTNYRNRFWPAHYLIDAEGT 409

Query: 548 LLAQLAGEGHRKDLDDLVEAAL 569
           +     GEG  +  + L+   L
Sbjct: 410 VRHIKFGEGDYQTTEKLIRELL 431


>gi|436737055|ref|YP_007318419.1| Peroxiredoxin [Chamaesiphon minutus PCC 6605]
 gi|428021351|gb|AFY97044.1| Peroxiredoxin [Chamaesiphon minutus PCC 6605]
          Length = 192

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +PEF    +W+N++P+    DL GKVV++  WT  CINC   LP +    KKY       
Sbjct: 50  LPEFQGISEWMNSSPIT-TNDLLGKVVLVQIWTLGCINCQRTLPYVTSWHKKYAAKGLQT 108

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +G+H+ +F  E+D + IR A+ ++GI++PV  D D   W+      WP   +    G + 
Sbjct: 109 IGIHTPEFPFERDRKNIRRAIAKHGITYPVGVDNDFQTWKAFKNEYWPHLFLADRQGIIR 168

Query: 550 AQLAGEG 556
               GEG
Sbjct: 169 YDHIGEG 175


>gi|320107313|ref|YP_004182903.1| NHL repeat containing protein [Terriglobus saanensis SP1PR4]
 gi|319925834|gb|ADV82909.1| NHL repeat containing protein [Terriglobus saanensis SP1PR4]
          Length = 1821

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 180/421 (42%), Gaps = 49/421 (11%)

Query: 597  TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFD--DA 654
            +SP+  P  + +D   N +++SD+N+NR+   D   + I  +   G  G+         A
Sbjct: 174  SSPIFIPSGVVVDPAGN-IYLSDTNNNRVRRVDAVTHVITTVAGDGTTGVTGDGGPAVSA 232

Query: 655  TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-GTKGSDYQGGEKGTSQ 713
              N P  L  N   +L Y+ADT N+A+R++      + T+AG  G  GS   GG   T  
Sbjct: 233  PVNYPTALVLNGAGDL-YIADTRNNAIRKLTLATGILSTIAGRLGVPGSSGDGGSA-TLA 290

Query: 714  LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS-- 771
             LN+P  +        +YIA  G   I       G+   F+G     +  G     ++  
Sbjct: 291  TLNAPGGLAMDAAGF-LYIADTGNDTIRRIDPSTGMITLFAGIPTVADFAGDGGPASAGR 349

Query: 772  FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
            F  P G+++      +Y+AD  +  IR +      S +   G P       ++    G+ 
Sbjct: 350  FNNPLGLAIDSG-GSLYIADQANHRIRMITAGGSLSTVAGTGVP-------RYNGDGGLA 401

Query: 832  SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFK--DGAALA 888
                LQ P  V       +Y+ADS NH ++K+   +  +S++ GI G A +   +G A  
Sbjct: 402  VAAQLQQPAAVAVDVARNLYIADSNNHLVRKVSSTTGLISSIVGIPGAAAYSGDNGPANV 461

Query: 889  AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSPKRL 948
            A+++ P  +     G+L+ AD  NN IR     K      TL+            +P R+
Sbjct: 462  AKINGPYALALDSAGDLYFADLLNNRIR-----KVSNSYATLQ-----------YTPIRV 505

Query: 949  RRRSSPDAQTIVVDGGLSNEGNIYLKISLPEEYHFSKEARSKFSVDVEPENAVIIDPLDG 1008
             R S+P +QT   DG   N+  I+  I+ P+         +  + D    +  I+ PLD 
Sbjct: 506  GRTSAPQSQTFENDG---NDSLIFTAIA-PD---------ADSATDPGTTSCAIVTPLDK 552

Query: 1009 N 1009
            N
Sbjct: 553  N 553



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 29/261 (11%)

Query: 686 FVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
           F+  TV T+AGN +      GG+  +S +   P  V   P    +Y++    +++     
Sbjct: 149 FLPGTVSTVAGNSSFNYAGDGGDARSSPIF-IPSGVVVDPAGN-IYLSDTNNNRVRR--- 203

Query: 746 VDGVTRAFSGDGYERNLNGSS----SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALN 801
           VD VT   +    +     +     +++     P+ + L+    ++Y+AD+ +++IR L 
Sbjct: 204 VDAVTHVITTVAGDGTTGVTGDGGPAVSAPVNYPTALVLN-GAGDLYIADTRNNAIRKLT 262

Query: 802 LKTGGSRLLAG--GDPIFPDNLFKFGDRDGMGSEVL--LQHPLGVYCAKNGQIYVADSYN 857
           L TG    +AG  G P         G     GS  L  L  P G+     G +Y+AD+ N
Sbjct: 263 LATGILSTIAGRLGVP---------GSSGDGGSATLATLNAPGGLAMDAAGFLYIADTGN 313

Query: 858 HKIKKLDPASNRVSTLAGIGK-AGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914
             I+++DP++  ++  AGI   A F    G A A + + P G+     G+L+IAD  N+ 
Sbjct: 314 DTIRRIDPSTGMITLFAGIPTVADFAGDGGPASAGRFNNPLGLAIDSGGSLYIADQANHR 373

Query: 915 IRYLDLNKEEPELQTLELKGV 935
           IR +        L T+   GV
Sbjct: 374 IRMI---TAGGSLSTVAGTGV 391


>gi|261404592|ref|YP_003240833.1| copper amine oxidase domain-containing protein [Paenibacillus sp.
           Y412MC10]
 gi|261281055|gb|ACX63026.1| copper amine oxidase domain protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 142/323 (43%), Gaps = 61/323 (18%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
           L  P  +A+D    +++I+DS ++ I   D  G  +  I  +G  GL+DG   DA F+ P
Sbjct: 140 LNRPSGIAVD-GKGQVYIADSGNHAIRKIDQAGR-VTTIAGNGRIGLKDGKAQDALFHEP 197

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           Q +A   +  +LYVADT NH +R I   +  V T+    T+    + G            
Sbjct: 198 QDVAVT-EDGILYVADTLNHVIRRIS-PDGEVTTIGSPSTRAVQVRAG------------ 243

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
                       IA+AG ++                       NGS +    F +P+G++
Sbjct: 244 -----------VIALAGDYK-----------------------NGSLA-EAQFNEPAGLA 268

Query: 780 LSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDP----IFPDNLFKF-GDRDGMGSEV 834
           L      +YV+DS + +IR ++   G     AG  P       D L+   G  DG     
Sbjct: 269 LDGKG-NLYVSDSGNHAIRYIDFGKGTVSTAAGSVPSSDGYAKDALYADPGYLDGAADAA 327

Query: 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
               P G+  +    + +ADS+NH +++L     RVST+AG G  G+ DG     + + P
Sbjct: 328 RFNSPRGLAWSVEDGLLIADSHNHAVRQL--KDERVSTMAG-GTRGYADGIESEVRFNAP 384

Query: 895 AGI-IEAQNGNLFIADTNNNIIR 916
           A I + + +G LFIAD  N  +R
Sbjct: 385 ADIAVASDSGELFIADQRNGAVR 407



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 8/190 (4%)

Query: 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
           T    G G+   L+ SS  +    QP  ++   D   + V+D+E+  IR   +K G S +
Sbjct: 55  TTIAGGPGHAAGLS-SSLASEGLRQPGSVAWLRDG-SVIVSDTENHVIR--KIKDGKSSI 110

Query: 810 LAGGDPIFP---DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
           LAG    +      L   G  DG G    L  P G+     GQ+Y+ADS NH I+K+D A
Sbjct: 111 LAGASLSYKRDGGGLPIGGLLDGQGELAFLNRPSGIAVDGKGQVYIADSGNHAIRKIDQA 170

Query: 867 SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPE 926
             RV+T+AG G+ G KDG A  A   EP  +   ++G L++ADT N++IR +  + E   
Sbjct: 171 -GRVTTIAGNGRIGLKDGKAQDALFHEPQDVAVTEDGILYVADTLNHVIRRISPDGEVTT 229

Query: 927 LQTLELKGVQ 936
           + +   + VQ
Sbjct: 230 IGSPSTRAVQ 239



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 123/279 (44%), Gaps = 43/279 (15%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNG--------TKGSDYQGGEKGTSQLLNSPWDVC 722
           + V+DTENH +R+I     ++  LAG                    +G    LN P  + 
Sbjct: 90  VIVSDTENHVIRKIKDGKSSI--LAGASLSYKRDGGGLPIGGLLDGQGELAFLNRPSGIA 147

Query: 723 YKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP 782
                + VYIA +G H I +      VT   +G+G    L    + +  F +P  ++++ 
Sbjct: 148 VDGKGQ-VYIADSGNHAIRKIDQAGRVT-TIAGNG-RIGLKDGKAQDALFHEPQDVAVTE 204

Query: 783 DFMEIYVADSESSSIRALN----LKTGGS------RLLAGGDPIFPDNLFKFGDRDGMGS 832
           D + +YVAD+ +  IR ++    + T GS      ++ AG   +  D       ++G  +
Sbjct: 205 DGI-LYVADTLNHVIRRISPDGEVTTIGSPSTRAVQVRAGVIALAGDY------KNGSLA 257

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-------------IGKA 879
           E     P G+     G +YV+DS NH I+ +D     VST AG                 
Sbjct: 258 EAQFNEPAGLALDGKGNLYVSDSGNHAIRYIDFGKGTVSTAAGSVPSSDGYAKDALYADP 317

Query: 880 GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           G+ DGAA AA+ + P G+  +    L IAD++N+ +R L
Sbjct: 318 GYLDGAADAARFNSPRGLAWSVEDGLLIADSHNHAVRQL 356



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 26/168 (15%)

Query: 647 RDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ- 705
           ++GS  +A FN P GLA + K NL YV+D+ NHA+R IDF   TV T AG+      Y  
Sbjct: 252 KNGSLAEAQFNEPAGLALDGKGNL-YVSDSGNHAIRYIDFGKGTVSTAAGSVPSSDGYAK 310

Query: 706 -------GGEKGTSQL--LNSPWDVCYKPINEKVYIAMAGQHQIWEH-----STVDGVTR 751
                  G   G +     NSP  + +  + + + IA +  H + +      ST+ G TR
Sbjct: 311 DALYADPGYLDGAADAARFNSPRGLAWS-VEDGLLIADSHNHAVRQLKDERVSTMAGGTR 369

Query: 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRA 799
            ++ DG E  +         F  P+ I+++ D  E+++AD  + ++RA
Sbjct: 370 GYA-DGIESEVR--------FNAPADIAVASDSGELFIADQRNGAVRA 408


>gi|400294458|ref|ZP_10796242.1| redoxin, partial [Actinomyces naeslundii str. Howell 279]
 gi|399900433|gb|EJN83404.1| redoxin, partial [Actinomyces naeslundii str. Howell 279]
          Length = 364

 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 11/168 (6%)

Query: 430 VPEFPAKLDWLNT---APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           +P     + WLNT    PL  ++D  GKV ++DF+ Y CINC   +P +E L + Y +  
Sbjct: 69  LPAIDGTVAWLNTPGNQPLT-QKDRSGKVTLVDFFAYSCINCQRSIPGVEKLHQTYAEYG 127

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             V+GVHS ++  EK+++ +R  V R GI++PV  D ++  W     + WP   +    G
Sbjct: 128 LQVIGVHSPEYAFEKEVDNVRGGVERLGITYPVAVDSNLTTWSNFNNHYWPAHYLADAQG 187

Query: 547 KLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNT--PLPLSLEKDND 592
            +     GEG     +  V   L     K+   N   P P+  E D+D
Sbjct: 188 NVRQTHVGEGGEATTEKHVRELL-----KQANPNVSLPAPVFSEVDDD 230


>gi|290996598|ref|XP_002680869.1| predicted protein [Naegleria gruberi]
 gi|284094491|gb|EFC48125.1| predicted protein [Naegleria gruberi]
          Length = 1407

 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 168/339 (49%), Gaps = 35/339 (10%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSF-DDA 654
           T+ L  P    + + N+ ++I+DS ++R+     +GN IV I  +G  G   DG    +A
Sbjct: 108 TAQLNTP--TGVFVFNSEIYIADSQNSRVRKIQTNGN-IVTIAGNGNAGYNGDGMLATNA 164

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTK--------GSDYQG 706
             N P  +  ++  N+ Y+++ +NH +R ++     + T+AGNGT+        G  Y G
Sbjct: 165 YLNSPVDVFVSSNGNV-YISEYQNHYIRMVNVSTGVITTVAGNGTQIGTSGTGLGFGYNG 223

Query: 707 -GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS 765
            G   T   L +P  + +   N ++YIA AG  +I +  T +G     +G G E   NG 
Sbjct: 224 DGIPATYARLTNPQGI-FVTSNNEIYIADAGNFRIRKVLT-NGTIITVAGTG-EEGYNGD 280

Query: 766 SSLNTS--FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
             L T+     P G+S+  +  EI++A+  S+ +R + L  G    +AG       N   
Sbjct: 281 GMLATAAKLDYPYGVSVDSN-GEIWIAELGSNRLRKV-LTNGTIVTIAGTGTSSYTNY-- 336

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK- 882
              +D + + ++   P+ V+    G+++++D  N +++++  ++  ++T+AGIG + F  
Sbjct: 337 ---KDNVQANLVNVSPIRVFSTSPGEVFISD--NMRLRRISTSTGIITTVAGIGGSTFSG 391

Query: 883 DG-----AALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           DG     A      ++ A +++  NG   IADT N+ IR
Sbjct: 392 DGSQATKATFKFMTNQLANVVKTSNGQYLIADTGNHRIR 430



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 38/321 (11%)

Query: 609 DILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDAT--FNRPQGL-AYN 665
           D+ +  LFISD++++RIV        ++ I  +G  G    +    T   N P G+  +N
Sbjct: 62  DLSSGDLFISDNSNHRIVRVFAANGTVLTIAGTGVSGYNGDNIQATTAQLNTPTGVFVFN 121

Query: 666 AKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTSQLLNSPWDVCYK 724
           ++   +Y+AD++N  +R+I   N  + T+AGNG  G  Y G G   T+  LNSP DV + 
Sbjct: 122 SE---IYIADSQNSRVRKIQ-TNGNIVTIAGNGNAG--YNGDGMLATNAYLNSPVDV-FV 174

Query: 725 PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG-----------YERNLNGSSSLNTSFA 773
             N  VYI+    H I   +   GV    +G+G           +  N +G  +      
Sbjct: 175 SSNGNVYISEYQNHYIRMVNVSTGVITTVAGNGTQIGTSGTGLGFGYNGDGIPATYARLT 234

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGM-G 831
            P GI ++ +  EIY+AD+ +  IR + L  G    +AG G+  +        + DGM  
Sbjct: 235 NPQGIFVTSN-NEIYIADAGNFRIRKV-LTNGTIITVAGTGEEGY--------NGDGMLA 284

Query: 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA---GFKDGAALA 888
           +   L +P GV    NG+I++A+  +++++K+   +  + T+AG G +    +KD     
Sbjct: 285 TAAKLDYPYGVSVDSNGEIWIAELGSNRLRKV-LTNGTIVTIAGTGTSSYTNYKDNVQAN 343

Query: 889 AQLSEPAGIIEAQNGNLFIAD 909
                P  +     G +FI+D
Sbjct: 344 LVNVSPIRVFSTSPGEVFISD 364



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 132/254 (51%), Gaps = 15/254 (5%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNSPWDVCYKPINEK 729
           L+++D  NH +  +   N TV T+AG G  G  Y G   + T+  LN+P  V     N +
Sbjct: 68  LFISDNSNHRIVRVFAANGTVLTIAGTGVSG--YNGDNIQATTAQLNTPTGV--FVFNSE 123

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           +YIA +   ++ +  T +G     +G+G    N +G  + N     P  + +S +   +Y
Sbjct: 124 IYIADSQNSRVRKIQT-NGNIVTIAGNGNAGYNGDGMLATNAYLNSPVDVFVSSN-GNVY 181

Query: 789 VADSESSSIRALNLKTGGSRLLAG-GDPIFPDNL-FKFG-DRDGM-GSEVLLQHPLGVYC 844
           +++ ++  IR +N+ TG    +AG G  I        FG + DG+  +   L +P G++ 
Sbjct: 182 ISEYQNHYIRMVNVSTGVITTVAGNGTQIGTSGTGLGFGYNGDGIPATYARLTNPQGIFV 241

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGA-ALAAQLSEPAGIIEAQN 902
             N +IY+AD+ N +I+K+   +  + T+AG G+ G+  DG  A AA+L  P G+    N
Sbjct: 242 TSNNEIYIADAGNFRIRKV-LTNGTIITVAGTGEEGYNGDGMLATAAKLDYPYGVSVDSN 300

Query: 903 GNLFIADTNNNIIR 916
           G ++IA+  +N +R
Sbjct: 301 GEIWIAELGSNRLR 314



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 35/225 (15%)

Query: 712 SQLLNSPWDVCYKPINE-KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNG------ 764
           +++ N   + C+K ++   ++I+    H+I      +G     +G G     NG      
Sbjct: 49  AKMANIDVNSCFKDLSSGDLFISDNSNHRIVRVFAANGTVLTIAGTGVS-GYNGDNIQAT 107

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
           ++ LNT    P+G+ +     EIY+ADS++S +R +  +T G+ +   G+     N    
Sbjct: 108 TAQLNT----PTGVFVFNS--EIYIADSQNSRVRKI--QTNGNIVTIAGNGNAGYN---- 155

Query: 825 GDRDGM-GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG----IGKA 879
              DGM  +   L  P+ V+ + NG +Y+++  NH I+ ++ ++  ++T+AG    IG +
Sbjct: 156 --GDGMLATNAYLNSPVDVFVSSNGNVYISEYQNHYIRMVNVSTGVITTVAGNGTQIGTS 213

Query: 880 GFKDG--------AALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           G   G         A  A+L+ P GI    N  ++IAD  N  IR
Sbjct: 214 GTGLGFGYNGDGIPATYARLTNPQGIFVTSNNEIYIADAGNFRIR 258



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 32/257 (12%)

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKG--SDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +ADT NH +R++ F N T+ T+AG G  G  SDY   +  T+Q LN P  V ++  NE V
Sbjct: 421 IADTGNHRIRKV-FANGTIITIAGTGVAGYNSDYM--DASTAQ-LNYPSSV-FEFKNE-V 474

Query: 731 YIAMAGQ---HQIWEHSTVDGVTRAFSG-----DGYERNLNGSSSLNTSFAQPSGISLSP 782
           YI+ +      +I+ + T+  VT A +G      GY  + +G ++L+     P+GI ++ 
Sbjct: 475 YISDSVNRRIRKIFTNGTI--VTIAGTGSQPPSSGYLGD-DGVNALSARLYFPTGIFVTS 531

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842
              E+++ D+    IR +N   G    +AG   I  ++ F  G      + V +    G+
Sbjct: 532 A-NEVFIVDNF--LIRKIN-SNGIITNVAG--TISSESTFIPGSS--QANSVTISVDGGI 583

Query: 843 YCAKNGQIYVADSYNHKIKKL--DPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA 900
           Y +  G  ++A  YN K+  +  D ++N ++  +G+G +   +G  L A LS P  +  +
Sbjct: 584 YVSPTGFYFLA-YYNSKLSVMYVDSSTNILNVYSGLGASLNDNGNILYAGLS-PISVFGS 641

Query: 901 QNGN-LFIADTNNNIIR 916
              N + I+D   N +R
Sbjct: 642 SISNFIVISDRGQNRMR 658


>gi|428166914|gb|EKX35881.1| hypothetical protein GUITHDRAFT_79273, partial [Guillardia theta
           CCMP2712]
          Length = 318

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 86/304 (28%), Positives = 138/304 (45%), Gaps = 25/304 (8%)

Query: 629 DLDGNFIVQI-GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFV 687
           DL    +  I G  G     D +  +A F+   G+     +  LYVAD  N+ LR ID  
Sbjct: 26  DLTTKIVTTIAGLCGTNQYVDSTGTNARFSNMIGVDLTKNEQYLYVADVGNNKLRRIDTA 85

Query: 688 NDTVRTLA--GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
              +  +A  G+GT G + QG   GT   +N+P+ V   P    V ++  G + I +   
Sbjct: 86  TFPITAVAWIGDGTAG-NVQG--YGTKARINTPYGVKVSPCGNYVIVSDTGNNMIRKVDI 142

Query: 746 VDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG 805
             G T   +G       NG  +L   F  P  +++  +    YV+D  ++ IR ++L T 
Sbjct: 143 ESGYTNTLAGQSLAGTANGVGTL-AQFNMPVDVTVDWNETVAYVSDQGNNCIRKIDLLTA 201

Query: 806 G--------SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADSY 856
                    S ++  G  +        G  D +G      +P GV     G  + VADS 
Sbjct: 202 ALDWTSATPSLVVVAGSGVA-------GLTDAVGLSAQFYNPTGVAVDWYGASLLVADSM 254

Query: 857 NHKIKKLDPASNRVSTLAGIGKAGFKDGA-ALAAQLSEPAGIIEAQNGN-LFIADTNNNI 914
           +  I+++D  ++ V+TLAG G AGF D   A  A+ + P G+  +++G  +F++D N N 
Sbjct: 255 DSTIRRIDLMTSEVTTLAGNGNAGFIDNLYANDAEFTVPFGVALSRDGKYVFVSDQNRNN 314

Query: 915 IRYL 918
           IR +
Sbjct: 315 IRKM 318



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 24/277 (8%)

Query: 661 GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWD 720
           G+  +  +N+LY    +N+ ++EID     V T+A  G  G++      GT+   ++   
Sbjct: 2   GIVPSKSRNVLYSTTWDNYCVKEIDLTTKIVTTIA--GLCGTNQYVDSTGTNARFSNMIG 59

Query: 721 VCYKPINEKVYIAMAGQHQI--WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778
           V      + +Y+A  G +++   + +T      A+ GDG   N+ G  +       P G+
Sbjct: 60  VDLTKNEQYLYVADVGNNKLRRIDTATFPITAVAWIGDGTAGNVQGYGT-KARINTPYGV 118

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
            +SP    + V+D+ ++ IR +++++G +  LAG            G  +G+G+      
Sbjct: 119 KVSPCGNYVIVSDTGNNMIRKVDIESGYTNTLAGQSLA--------GTANGVGTLAQFNM 170

Query: 839 PLGVYCAKNGQI-YVADSYNHKIKKLD---------PASNRVSTLAGIGKAGFKDGAALA 888
           P+ V    N  + YV+D  N+ I+K+D          A+  +  +AG G AG  D   L+
Sbjct: 171 PVDVTVDWNETVAYVSDQGNNCIRKIDLLTAALDWTSATPSLVVVAGSGVAGLTDAVGLS 230

Query: 889 AQLSEPAGI-IEAQNGNLFIADTNNNIIRYLDLNKEE 924
           AQ   P G+ ++    +L +AD+ ++ IR +DL   E
Sbjct: 231 AQFYNPTGVAVDWYGASLLVADSMDSTIRRIDLMTSE 267



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 31/280 (11%)

Query: 601 KFPGKLAIDILNNR--LFISDSNHNRIVVTDLDGNFIVQIG--SSGEEGLRDGSFDDATF 656
           +F   + +D+  N   L+++D  +N++   D     I  +     G  G   G    A  
Sbjct: 53  RFSNMIGVDLTKNEQYLYVADVGNNKLRRIDTATFPITAVAWIGDGTAGNVQGYGTKARI 112

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
           N P G+  +   N + V+DT N+ +R++D  +    TLAG    G+       GT    N
Sbjct: 113 NTPYGVKVSPCGNYVIVSDTGNNMIRKVDIESGYTNTLAGQSLAGT---ANGVGTLAQFN 169

Query: 717 SPWDVCYKPINEKVYIAMAGQHQI-----------WEHSTVDGVTRAFSGDGYERNLNGS 765
            P DV         Y++  G + I           W  +T   V  A SG      L  +
Sbjct: 170 MPVDVTVDWNETVAYVSDQGNNCIRKIDLLTAALDWTSATPSLVVVAGSGVA---GLTDA 226

Query: 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKF 824
             L+  F  P+G+++      + VADS  S+IR ++L T     LAG G+  F DNL+  
Sbjct: 227 VGLSAQFYNPTGVAVDWYGASLLVADSMDSTIRRIDLMTSEVTTLAGNGNAGFIDNLY-- 284

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKL 863
                  ++     P GV  +++G+ ++V+D   + I+K+
Sbjct: 285 ------ANDAEFTVPFGVALSRDGKYVFVSDQNRNNIRKM 318


>gi|154508395|ref|ZP_02044037.1| hypothetical protein ACTODO_00892 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798029|gb|EDN80449.1| redoxin family protein [Actinomyces odontolyticus ATCC 17982]
          Length = 442

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 438 DWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           +WLN+       +  G V ++DFW+  C+NC   +P++E + +KYKD    V+GVHS + 
Sbjct: 310 EWLNS-----LGEPHGTVTLVDFWSSSCVNCAREIPEVERIYEKYKDAGLVVIGVHSPQQ 364

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
            +E++   +  A  R GI++PV  D ++  ++  G N+WPT  + GP+G+L
Sbjct: 365 AHEREASVVSGAASRLGITYPVALDPELEAFKAYGANAWPTHYLAGPDGQL 415


>gi|311113453|ref|YP_003984675.1| DipZ protein [Rothia dentocariosa ATCC 17931]
 gi|310944947|gb|ADP41241.1| DipZ protein [Rothia dentocariosa ATCC 17931]
          Length = 603

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 4/142 (2%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PE        NT        ++GKV ++DFW Y CINC    P L  L  KY D    +V
Sbjct: 308 PELAGGTGNFNTENQPSLAHMRGKVTLVDFWAYSCINCQRTAPHLNELYAKYHDYGLEIV 367

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E + + ++  +   GI +PVV D D  +WR      WP   ++   GKL A
Sbjct: 368 GVHTPEYAFEHEGKNVQAGIENLGIKYPVVQDNDYAIWRAYSNRYWPAHYLIDSEGKLRA 427

Query: 551 QLAGEGHRK----DLDDLVEAA 568
              GEG  K     + +L++AA
Sbjct: 428 VHYGEGGHKVTEAQVRELLKAA 449


>gi|291296580|ref|YP_003507978.1| HAD superfamily hydrolase [Meiothermus ruber DSM 1279]
 gi|290471539|gb|ADD28958.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Meiothermus
           ruber DSM 1279]
          Length = 228

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 11/198 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANF--LGGVASVK 136
           + A++FD DG + ++E+   +A  +V+   G E+++E +LPF+G     F   G +  + 
Sbjct: 1   MQALIFDFDGTILDTEKSEFQAWQEVYQAHGAELSLEYWLPFIGNNSIPFDPAGNLERLV 60

Query: 137 GVKGFDSEAAKKRFFEIYLDKYAKP--NSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           G      +   K   E ++D+  +    S    PG L+ +   ++ GLK+AVASS+ R  
Sbjct: 61  G------QPLDKENIERWVDERKRTLNQSLQPLPGVLDYLEAAQAMGLKLAVASSSRRAW 114

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           V+ +L   GL +  F  I + +     KP P +FL A++ L V   E IV+ED+L GV+A
Sbjct: 115 VEGHLEWLGL-LGYFQVIRTKEDVTLTKPDPALFLRAAEGLGVAPQETIVLEDSLNGVRA 173

Query: 255 AKAAQMRCIAVTTTLSEE 272
           AKAA    +A+   L++ 
Sbjct: 174 AKAAGAFTVAIPNALTQH 191


>gi|421097867|ref|ZP_15558546.1| hypothetical protein LEP1GSC125_1130 [Leptospira borgpetersenii
           str. 200901122]
 gi|410799150|gb|EKS01231.1| hypothetical protein LEP1GSC125_1130 [Leptospira borgpetersenii
           str. 200901122]
          Length = 357

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 30/274 (10%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+FN P GL  +   N+ +V+D   + +R+ID   + V TL+            
Sbjct: 69  DGTTQTASFNTPFGLELDTFGNI-FVSDQTANLIRKIDRFGN-VTTLS------------ 114

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGYERNLNGSS 766
              TS +  +P  + + PI    Y++     QI +   +D  +  A S  G +   NG  
Sbjct: 115 ---TSLVFQNPSGIKFDPITGDKYVSCKDSAQILKIDHLDQFSLYAGSSSGVDGFQNGDR 171

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD 826
            LN+ F  P  + L  +   +YV +  + +IR +NL +G    L+GG           G 
Sbjct: 172 -LNSLFKSPFFMDLDRE-RNLYVGELSNHAIRKINLNSGTVSTLSGG---------VLGY 220

Query: 827 RDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            DG  +    + PLG+ Y  K   + VAD  NH I+K+D  ++ VSTL G G     DG 
Sbjct: 221 LDGDLASAQFKSPLGITYDQKTDSLLVADIQNHNIRKIDLKASTVSTLLGNGIGTDIDGK 280

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            L A  + PA I    +G +F++D N+N IR +D
Sbjct: 281 GLNASFNGPAFISLDNSGYMFVSDANSNKIRIVD 314



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 23/164 (14%)

Query: 766 SSLNTS--FAQPSGISLSPDFMEIYVADSESSSIRALN------LKTGGSRLLAGGDPIF 817
           ++L+TS  F  PSGI   P   + YV+  +S+ I  ++      L  G S  + G     
Sbjct: 111 TTLSTSLVFQNPSGIKFDPITGDKYVSCKDSAQILKIDHLDQFSLYAGSSSGVDG----- 165

Query: 818 PDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG 877
               F+ GDR       L + P  +   +   +YV +  NH I+K++  S  VSTL+G G
Sbjct: 166 ----FQNGDR----LNSLFKSPFFMDLDRERNLYVGELSNHAIRKINLNSGTVSTLSG-G 216

Query: 878 KAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDL 920
             G+ DG   +AQ   P GI   Q  + L +AD  N+ IR +DL
Sbjct: 217 VLGYLDGDLASAQFKSPLGITYDQKTDSLLVADIQNHNIRKIDL 260



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 640 SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
           S G  G  DG    A F  P G+ Y+ K + L VAD +NH +R+ID    TV TL GNG 
Sbjct: 214 SGGVLGYLDGDLASAQFKSPLGITYDQKTDSLLVADIQNHNIRKIDLKASTVSTLLGNGI 273

Query: 700 KGSDYQGGEKGTSQLLNSP 718
            G+D  G  KG +   N P
Sbjct: 274 -GTDIDG--KGLNASFNGP 289



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 36/287 (12%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+    P  L +D   N +F+SD   N I   D  GN +  + +S              F
Sbjct: 74  TASFNTPFGLELDTFGN-IFVSDQTANLIRKIDRFGN-VTTLSTS------------LVF 119

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  ++  + +ID + D     AG+ +    +Q G++  S L  
Sbjct: 120 QNPSGIKFDPITGDKYVSCKDSAQILKIDHL-DQFSLYAGSSSGVDGFQNGDRLNS-LFK 177

Query: 717 SPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
           SP+   +  ++ +  +Y+     H I + +   G     SG G    L+G  + +  F  
Sbjct: 178 SPF---FMDLDRERNLYVGELSNHAIRKINLNSGTVSTLSG-GVLGYLDGDLA-SAQFKS 232

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGG-SRLLAGGDPIFPDNLFKFGDRDGMGSE 833
           P GI+       + VAD ++ +IR ++LK    S LL  G            D DG G  
Sbjct: 233 PLGITYDQKTDSLLVADIQNHNIRKIDLKASTVSTLLGNGIGT---------DIDGKGLN 283

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS---TLAGIG 877
                P  +    +G ++V+D+ ++KI+ +D   N  +   T AGIG
Sbjct: 284 ASFNGPAFISLDNSGYMFVSDANSNKIRIVDSDLNVSTIPHTFAGIG 330



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 27/176 (15%)

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V   F+G G + +++G++    SF  P G+ L   F  I+V+D  ++ IR ++       
Sbjct: 55  VISLFAGTGIKESIDGTTQ-TASFNTPFGLELDT-FGNIFVSDQTANLIRKID------- 105

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPAS 867
                         +FG+   + + ++ Q+P G+ +    G  YV+   + +I K+D   
Sbjct: 106 --------------RFGNVTTLSTSLVFQNPSGIKFDPITGDKYVSCKDSAQILKIDHL- 150

Query: 868 NRVSTLAGI--GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
           ++ S  AG   G  GF++G  L +    P  +   +  NL++ + +N+ IR ++LN
Sbjct: 151 DQFSLYAGSSSGVDGFQNGDRLNSLFKSPFFMDLDRERNLYVGELSNHAIRKINLN 206


>gi|418707795|ref|ZP_13268612.1| putative lipoprotein [Leptospira interrogans serovar Grippotyphosa
           str. UI 08368]
 gi|410771897|gb|EKR47094.1| putative lipoprotein [Leptospira interrogans serovar Grippotyphosa
           str. UI 08368]
 gi|456968671|gb|EMG09839.1| putative lipoprotein [Leptospira interrogans serovar Grippotyphosa
           str. LT2186]
          Length = 358

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 42/298 (14%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ YV+D  N+ +R+ID  +  V+TL+            
Sbjct: 70  DGTTSTASFKTPFGLEVDTSGNI-YVSDQINNLIRKID-PSGNVKTLS------------ 115

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW------EHSTVDGVTRAFSGDGYERN 761
              T+  L  P  + + P+    Y++    +QI+      + S   G + AF G      
Sbjct: 116 ---TNLPLQDPSGIKFDPLTGDKYVSCKDSNQIYKIDSTEQFSLFAGSSSAFGG------ 166

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
           L     LN+ F  P  + + P+   +YV +  + +IR +NL +G   +L+GG        
Sbjct: 167 LQNGDRLNSLFDSPFFMDIDPE-RNLYVGELSNHTIRKINLNSGTVSILSGGIS------ 219

Query: 822 FKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
              G  DG  +    + PLG+ Y  K   +  AD  +H+I+K+D  ++ VSTL G G   
Sbjct: 220 ---GYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGA 276

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD--LNKEEPELQTLELKGVQ 936
             DG    A    PA I    +G +F++D N+N IR +D  LN    +   +E+  V+
Sbjct: 277 DVDGNGTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLNVSTIDHTFMEIGTVK 334



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 636 VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLA 695
           V I S G  G  DG    A F  P G+AYN K N L  AD ++H +R+ID  N TV TL 
Sbjct: 211 VSILSGGISGYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLL 270

Query: 696 GNGTKGSDYQG 706
           GNG  G+D  G
Sbjct: 271 GNGI-GADVDG 280



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 30/278 (10%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +++SD  +N I   D  GN  V+  S+    L+D        
Sbjct: 75  TASFKTPFGLEVDTSGN-IYVSDQINNLIRKIDPSGN--VKTLSTNLP-LQD-------- 122

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  +++ + +ID   +     AG+ +     Q G++  S L +
Sbjct: 123 --PSGIKFDPLTGDKYVSCKDSNQIYKID-STEQFSLFAGSSSAFGGLQNGDRLNS-LFD 178

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SP+ +   P    +Y+     H I + +   G     SG G    L+G  + +  F  P 
Sbjct: 179 SPFFMDIDP-ERNLYVGELSNHTIRKINLNSGTVSILSG-GISGYLDGDLA-SARFKSPL 235

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGG-SRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           GI+ +     +  AD +   IR ++LK    S LL  G            D DG G+   
Sbjct: 236 GIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIG---------ADVDGNGTNAS 286

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
              P  +    +G ++V+D+ +++I+ +DP  N VST+
Sbjct: 287 FFGPAFISIDNSGYMFVSDANSNRIRIVDPLLN-VSTI 323


>gi|226330418|ref|ZP_03805936.1| hypothetical protein PROPEN_04336 [Proteus penneri ATCC 35198]
 gi|225201213|gb|EEG83567.1| HAD hydrolase, family IA, variant 3 [Proteus penneri ATCC 35198]
          Length = 226

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 8/190 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFM-GTGEANFLGGVASVKG 137
           + A +FDMDG+L +SE   ++A  +VFAE+GV++++   +P M G      +        
Sbjct: 11  IEAAIFDMDGLLIDSEPFWQQAEHEVFAELGVDLSLASAMPDMVGLRINEVIDLWYRASP 70

Query: 138 VKGFDSEAAKKRFFE--IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
            +G   + AK++     + L +  KP      PG    +  CKS GLK+A+AS++    +
Sbjct: 71  WQGVSKQEAKQKMVSRVVKLVEETKP----LLPGVEHALELCKSSGLKIALASASPDFML 126

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           +  L    +    F A+VSAD   + KP P+++L+A+K LN+    C+ +ED+  G+ A 
Sbjct: 127 ERVLELFNIR-HYFSAVVSADELPHSKPHPEVYLNAAKALNLDPIHCVSLEDSRNGMIAC 185

Query: 256 KAAQMRCIAV 265
           K A+MR I V
Sbjct: 186 KGARMRSIVV 195


>gi|408789339|ref|ZP_11201039.1| putative cytochrome c biogenesis protein [Rhizobium lupini HPC(L)]
 gi|408484843|gb|EKJ93197.1| putative cytochrome c biogenesis protein [Rhizobium lupini HPC(L)]
          Length = 291

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 65/114 (57%)

Query: 456 VVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGI 515
           +++DFWTY CINC+  LP +    +KY+D    V+GVH+ +F  EK ++ +R AV  + I
Sbjct: 1   MLIDFWTYSCINCIRTLPYVRAWAEKYRDQGLVVIGVHAPEFAFEKKIDNVRQAVAGFKI 60

Query: 516 SHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569
            +PV  D D  +WR    + WP   ++   G++     GEG  ++ ++ ++  L
Sbjct: 61  EYPVAIDNDYRIWRAFDNSYWPAHYLIDAKGQIRYHHFGEGDYRETEEAIQDLL 114


>gi|188588580|ref|YP_001921018.1| HAD-superfamily hydrolase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498861|gb|ACD51997.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 217

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 3/186 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A +FDMDGV+ +SE   R+   ++   +G+ ++  +   + G         +    G+
Sbjct: 1   MRAFIFDMDGVIIDSEPIHRQVHGEIMNTLGINISKGELALYAGATNEYIFTKLKERYGI 60

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
           K   SE    +  ++ ++K  K  S     G  EL+N  +   +K+A+ SS+ R  ++A 
Sbjct: 61  KKSVSELMDYKS-KLIINK-VKEESLEPINGIRELLNALRKNNIKIAIGSSSPRSLIEAV 118

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +    L  S FD IVS +  E  KP PD+++  SK L +   +CIV+ED+  GVQAAK+A
Sbjct: 119 IDKFNLH-SAFDCIVSGEEVERSKPYPDVYIEVSKNLGINPEKCIVVEDSHNGVQAAKSA 177

Query: 259 QMRCIA 264
            M+CI 
Sbjct: 178 GMKCIG 183


>gi|384457358|ref|YP_005669778.1| phosphatase [Clostridium acetobutylicum EA 2018]
 gi|325508047|gb|ADZ19683.1| phosphatase [Clostridium acetobutylicum EA 2018]
          Length = 215

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 9/189 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGVL +SE      A  +F E+ + +T  ++  F+GT        +     +
Sbjct: 2   IKAVIFDMDGVLIDSEPLHLDYAFKLFKELNITMTPNEYSKFIGTTSLYMWSNIKDTYNL 61

Query: 139 KG-FDSEAAKKR--FFEIYLDKYAKPNSGIGFPGAL-ELINQCKSKGLKVAVASSADRIK 194
           +   +S   K+R  FFE      + PN+ I     + EL+   K    K AVASS+  ++
Sbjct: 62  ENTVESLINKERNGFFEFL----SSPNTNIKPIDHIPELLGALKENNFKTAVASSS-PMR 116

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           V   +         F+ +V+ D  E  KP PDIFL A+K L+V   +C+VIED+  GV A
Sbjct: 117 VIKYIINNFELAKQFNELVTGDYVERSKPNPDIFLYAAKKLDVSPEQCVVIEDSHNGVLA 176

Query: 255 AKAAQMRCI 263
            K A M+CI
Sbjct: 177 TKNAGMKCI 185


>gi|195940804|ref|ZP_03086186.1| putative cytochrome c biogenesis protein, partial [Escherichia coli
           O157:H7 str. EC4024]
          Length = 276

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N  P+     L+GKVV++DFWT+ CINC H LP +    KK +     V
Sbjct: 133 LPSLDGGTGWVNGDPVT-SESLRGKVVLIDFWTWDCINCQHTLPYVRDWAKKCQSQGLVV 191

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  EK + +++NAV ++ + + VV D +  +W   G   WP        G+L 
Sbjct: 192 IGVHTPEYPWEKPISSVKNAVNKWQLPYRVVTDNNYKIWSAFGNQYWPAHYYFDAKGQLR 251

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG+    + +++  L
Sbjct: 252 YTSFGEGNYDKQEAVIQQLL 271


>gi|254381726|ref|ZP_04997090.1| integral membrane C-type cytochrome biogenesis protein dipZ
           [Streptomyces sp. Mg1]
 gi|194340635|gb|EDX21601.1| integral membrane C-type cytochrome biogenesis protein dipZ
           [Streptomyces sp. Mg1]
          Length = 680

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 439 WLNTA---PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSA 495
           WLNT    P+     L+GKVV++DFWTY CINC   LP ++  ++ YK     V+GVHS 
Sbjct: 396 WLNTPDGQPVDLT-ALRGKVVLIDFWTYSCINCQRSLPHVKDWDRVYKSSGLQVIGVHSP 454

Query: 496 KFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGE 555
           +F  EKD   + +   R G+ +PV  D  ++ W       WP   ++  NG +     GE
Sbjct: 455 EFAFEKDPGNVADQTRRLGVRYPVALDNQLDTWNAYRNRFWPAKYLIDANGTVRYFTFGE 514

Query: 556 GHRKDLDDLVEAAL 569
           G     +DL+   L
Sbjct: 515 GRYDQTEDLIRTLL 528


>gi|223939820|ref|ZP_03631690.1| NHL repeat containing protein [bacterium Ellin514]
 gi|223891508|gb|EEF57999.1| NHL repeat containing protein [bacterium Ellin514]
          Length = 805

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 154/328 (46%), Gaps = 23/328 (7%)

Query: 602 FPGKLAIDILNNRLFISDSNHNRI-VVTDLDGNFIVQI--GSSGEEGLRDGSFDDATFNR 658
           +P  LA D  +  LF+ DS++N I  +T +  N++V    GSS   G  DG+   A FN+
Sbjct: 178 YPEGLAFD-SSGHLFVGDSSNNSIRKMTPVGTNWVVTTIAGSSPVSGSNDGTNGFAHFNQ 236

Query: 659 PQGLAYNAKKNLLYVADTENHALREIDF--VNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
           P GLA +A  ++ +VAD  N  +R+I     N  V T+AG        +G   GT+ + N
Sbjct: 237 PCGLAVDAAGSI-FVADYFNSTIRKITSAGTNWLVTTIAGKVGVADSAEG--TGTNAVFN 293

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTS--FA 773
            P  V     N  V++A +  + I    T  G     S   G  R  N +   N +  F 
Sbjct: 294 YPHAVAVD-TNGNVFVADSENYTI-RKLTPSGTNYVVSTPIGQTRASNSTDGTNNAARFW 351

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
              GIS+      + VAD+++S IR   +   G+  +      F  N+   G  DG  + 
Sbjct: 352 FLLGISIDKA-GNLLVADTQNSEIR--KIAPVGTNYVVTTLAGFAQNV---GGADGTNAV 405

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAG-IGKAGFKDGAALAAQ 890
                P G+     G ++VAD  N+ I+KL P      V+T+AG  G A + DG    A 
Sbjct: 406 ARFNSPRGIAVDAAGNVFVADQNNNTIRKLTPVGTNWAVTTIAGQAGMAYYGDGNGTNAY 465

Query: 891 LSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            + PAGI    +GNLF+ D  N++IR L
Sbjct: 466 FNYPAGIAVDASGNLFVTDAGNHVIRKL 493



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 160/340 (47%), Gaps = 43/340 (12%)

Query: 600 LKFPGKLAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQI--GSSGEEGLRDGSFDDATF 656
             +P  +A+D   N +F++DS N+    +  L  N++V    G  G  G  DG+  DA F
Sbjct: 118 FYYPAAVAVDNSGN-VFVADSANYTIRKIAPLGTNWVVTTIAGVPGYHGSSDGTNTDALF 176

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFV--NDTVRTLAGNGTKGSDYQGGEKGTSQL 714
             P+GLA+++  +L +V D+ N+++R++  V  N  V T+AG+    S   G   GT+  
Sbjct: 177 FYPEGLAFDSSGHL-FVGDSSNNSIRKMTPVGTNWVVTTIAGS----SPVSGSNDGTNGF 231

Query: 715 --LNSPWDVCYKP---------INEKVY-IAMAGQHQIWEHSTVDG-VTRAFSGDGYERN 761
              N P  +              N  +  I  AG +  W  +T+ G V  A S +G    
Sbjct: 232 AHFNQPCGLAVDAAGSIFVADYFNSTIRKITSAGTN--WLVTTIAGKVGVADSAEG---- 285

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
               +  N  F  P  +++  +   ++VADSE+ +IR L   +G + +++   PI     
Sbjct: 286 ----TGTNAVFNYPHAVAVDTN-GNVFVADSENYTIRKL-TPSGTNYVVS--TPI--GQT 335

Query: 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAGIGK- 878
                 DG  +       LG+   K G + VAD+ N +I+K+ P      V+TLAG  + 
Sbjct: 336 RASNSTDGTNNAARFWFLLGISIDKAGNLLVADTQNSEIRKIAPVGTNYVVTTLAGFAQN 395

Query: 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
            G  DG    A+ + P GI     GN+F+AD NNN IR L
Sbjct: 396 VGGADGTNAVARFNSPRGIAVDAAGNVFVADQNNNTIRKL 435



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 153/330 (46%), Gaps = 32/330 (9%)

Query: 603 PGKLAIDILNNRLFISDSNHNRI-VVTDLDGNFIVQI--GSSGEEGLRDGSFDDATFNRP 659
           P  +A+D   N +F++D N+N I  +T +  N+ V    G +G     DG+  +A FN P
Sbjct: 411 PRGIAVDAAGN-VFVADQNNNTIRKLTPVGTNWAVTTIAGQAGMAYYGDGNGTNAYFNYP 469

Query: 660 QGLAYNAKKNLLYVADTENHALREID--FVNDTVRTLAGNGTKGSDYQGGEKGTSQL--- 714
            G+A +A  NL +V D  NH +R++     N  V T+AG+    +    G    ++    
Sbjct: 470 AGIAVDASGNL-FVTDAGNHVIRKLTPTATNYLVTTIAGSAAAQAGSTDGTNANARFFIV 528

Query: 715 ----LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS-GDGYERNLNGSSSLN 769
               +++  ++     N  +   +A     W  +T+ G   ++   DG   N+       
Sbjct: 529 DGITVDAAGNLFVADNNNCLIRKIAPVGTNWITTTIAGKLNSYDFADGVGTNI------- 581

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
             F QP+GI++      +YV D  ++ +R L     G+  ++     FP     +G  DG
Sbjct: 582 -LFNQPTGIAVGKG-GVVYVVDMGNNMVRKLTPN--GTNYVSSTVAAFPQ---AYGFMDG 634

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAGI-GKAGFKDGAA 886
             S+    +P G+    N  +YV D  N+ I+K+ P      V+TLAGI    G  DGA 
Sbjct: 635 TNSDARFAYPTGIAIDTNDTLYVTDQGNNTIRKVTPLGTNWMVTTLAGIHASTGSADGAG 694

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            AA  + P GI   + GNLF+AD  N+ IR
Sbjct: 695 SAALFNGPFGIAIDKTGNLFVADLQNSSIR 724



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 133/296 (44%), Gaps = 47/296 (15%)

Query: 645 GLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFV--NDTVRTLAGNGTKGS 702
           G  DG+   A FN P+  A ++  N +YVAD+ NH +R++  V  N  V T+AG      
Sbjct: 49  GSNDGTNRVARFNNPEATASDSAGN-IYVADSGNHVIRKMAAVGTNWVVTTIAG------ 101

Query: 703 DYQGGEKGTSQLLNSPWDVCYKPI-----NEKVYIAMAGQHQI---------WEHSTVDG 748
               G  G++   NS     Y        +  V++A +  + I         W  +T+ G
Sbjct: 102 --LPGNPGSADGTNSAAQFYYPAAVAVDNSGNVFVADSANYTIRKIAPLGTNWVVTTIAG 159

Query: 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
           V       GY  + +G+++ +  F  P G++       ++V DS ++SIR +    G + 
Sbjct: 160 V------PGYHGSSDGTNT-DALFFYPEGLAFDSS-GHLFVGDSSNNSIRKM-TPVGTNW 210

Query: 809 L---LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDP 865
           +   +AG  P+        G  DG         P G+     G I+VAD +N  I+K+  
Sbjct: 211 VVTTIAGSSPV-------SGSNDGTNGFAHFNQPCGLAVDAAGSIFVADYFNSTIRKITS 263

Query: 866 ASNR--VSTLAG-IGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           A     V+T+AG +G A   +G    A  + P  +    NGN+F+AD+ N  IR L
Sbjct: 264 AGTNWLVTTIAGKVGVADSAEGTGTNAVFNYPHAVAVDTNGNVFVADSENYTIRKL 319



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 151/322 (46%), Gaps = 22/322 (6%)

Query: 606 LAIDILNNRLFISDSNHNRI-VVTDLDGNFIVQI--GSSGEEGLRDGSFDDATFNRPQGL 662
           ++ID   N L ++D+ ++ I  +  +  N++V    G +   G  DG+   A FN P+G+
Sbjct: 356 ISIDKAGN-LLVADTQNSEIRKIAPVGTNYVVTTLAGFAQNVGGADGTNAVARFNSPRGI 414

Query: 663 AYNAKKNLLYVADTENHALREIDFV--NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWD 720
           A +A  N+ +VAD  N+ +R++  V  N  V T+AG    G  Y G   GT+   N P  
Sbjct: 415 AVDAAGNV-FVADQNNNTIRKLTPVGTNWAVTTIAGQ--AGMAYYGDGNGTNAYFNYPAG 471

Query: 721 VCYKPINEKVYIAMAGQHQIWE---HSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
           +     +  +++  AG H I +    +T   VT        +      ++ N  F    G
Sbjct: 472 IAVDA-SGNLFVTDAGNHVIRKLTPTATNYLVTTIAGSAAAQAGSTDGTNANARFFIVDG 530

Query: 778 ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837
           I++      ++VAD+ +  IR   +   G+  +          L  +   DG+G+ +L  
Sbjct: 531 ITVDAA-GNLFVADNNNCLIR--KIAPVGTNWIT---TTIAGKLNSYDFADGVGTNILFN 584

Query: 838 HPLGVYCAKNGQIYVADSYNHKIKKLDP-ASNRV-STLAGIGKA-GFKDGAALAAQLSEP 894
            P G+   K G +YV D  N+ ++KL P  +N V ST+A   +A GF DG    A+ + P
Sbjct: 585 QPTGIAVGKGGVVYVVDMGNNMVRKLTPNGTNYVSSTVAAFPQAYGFMDGTNSDARFAYP 644

Query: 895 AGIIEAQNGNLFIADTNNNIIR 916
            GI    N  L++ D  NN IR
Sbjct: 645 TGIAIDTNDTLYVTDQGNNTIR 666



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 159/372 (42%), Gaps = 48/372 (12%)

Query: 577 LLDNTPLPLSLEKDNDPRLFTS-----------------PLKFPGKLAIDILNNRLFISD 619
           LL    LPL  + D  P  FT+                     P   A D   N ++++D
Sbjct: 20  LLAIAALPLRAQVDYTPYNFTTIAGVASIGSNDGTNRVARFNNPEATASDSAGN-IYVAD 78

Query: 620 S-NHNRIVVTDLDGNFIVQI--GSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676
           S NH    +  +  N++V    G  G  G  DG+   A F  P  +A +   N+ +VAD+
Sbjct: 79  SGNHVIRKMAAVGTNWVVTTIAGLPGNPGSADGTNSAAQFYYPAAVAVDNSGNV-FVADS 137

Query: 677 ENHALREID--FVNDTVRTLAGNGTKGSDYQGGEKGTSQ--LLNSPWDVCYKPINEKVYI 732
            N+ +R+I     N  V T+AG       Y G   GT+   L   P  + +   +  +++
Sbjct: 138 ANYTIRKIAPLGTNWVVTTIAGV----PGYHGSSDGTNTDALFFYPEGLAFDS-SGHLFV 192

Query: 733 AMAGQHQIWEHSTV--DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVA 790
             +  + I + + V  + V    +G       N  ++    F QP G+++      I+VA
Sbjct: 193 GDSSNNSIRKMTPVGTNWVVTTIAGSSPVSGSNDGTNGFAHFNQPCGLAVDAA-GSIFVA 251

Query: 791 DSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD---GMGSEVLLQHPLGVYCAKN 847
           D  +S+IR +          AG + +      K G  D   G G+  +  +P  V    N
Sbjct: 252 DYFNSTIRKI--------TSAGTNWLVTTIAGKVGVADSAEGTGTNAVFNYPHAVAVDTN 303

Query: 848 GQIYVADSYNHKIKKLDPASNR--VSTLAGIGKA-GFKDGAALAAQLSEPAGIIEAQNGN 904
           G ++VADS N+ I+KL P+     VST  G  +A    DG   AA+     GI   + GN
Sbjct: 304 GNVFVADSENYTIRKLTPSGTNYVVSTPIGQTRASNSTDGTNNAARFWFLLGISIDKAGN 363

Query: 905 LFIADTNNNIIR 916
           L +ADT N+ IR
Sbjct: 364 LLVADTQNSEIR 375



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 153/342 (44%), Gaps = 40/342 (11%)

Query: 600 LKFPGKLAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQ--IGSSGEEGLRDGSFDDATF 656
             +P  +A+D  N  +F++DS N+    +T    N++V   IG +      DG+ + A F
Sbjct: 292 FNYPHAVAVDT-NGNVFVADSENYTIRKLTPSGTNYVVSTPIGQTRASNSTDGTNNAARF 350

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFV--NDTVRTLAGNGTKGSDYQGGEKGTSQL 714
               G++ +   NLL VADT+N  +R+I  V  N  V TLAG     +   GG  GT+ +
Sbjct: 351 WFLLGISIDKAGNLL-VADTQNSEIRKIAPVGTNYVVTTLAGF----AQNVGGADGTNAV 405

Query: 715 --LNSPWDVCYKPINEKVYIAMAGQHQI---------WEHSTVDG-VTRAFSGDGYERNL 762
              NSP  +        V++A    + I         W  +T+ G    A+ GDG     
Sbjct: 406 ARFNSPRGIAVDAAGN-VFVADQNNNTIRKLTPVGTNWAVTTIAGQAGMAYYGDG----- 459

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
           NG+   N  F  P+GI++      ++V D+ +  IR L   T  + L+     I      
Sbjct: 460 NGT---NAYFNYPAGIAVDAS-GNLFVTDAGNHVIRKL-TPTATNYLVT---TIAGSAAA 511

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR--VSTLAG-IGKA 879
           + G  DG  +        G+     G ++VAD+ N  I+K+ P       +T+AG +   
Sbjct: 512 QAGSTDGTNANARFFIVDGITVDAAGNLFVADNNNCLIRKIAPVGTNWITTTIAGKLNSY 571

Query: 880 GFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            F DG       ++P GI   + G +++ D  NN++R L  N
Sbjct: 572 DFADGVGTNILFNQPTGIAVGKGGVVYVVDMGNNMVRKLTPN 613



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 33/278 (11%)

Query: 600 LKFPGKLAIDILNNRLFISDS-NHNRIVVTDLDGNFIVQI---GSSGEEGLRDGSFDDAT 655
             +P  +A+D   N LF++D+ NH    +T    N++V      ++ + G  DG+  +A 
Sbjct: 466 FNYPAGIAVDASGN-LFVTDAGNHVIRKLTPTATNYLVTTIAGSAAAQAGSTDGTNANAR 524

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFV--NDTVRTLAGNGTKGSDYQGGEKGTSQ 713
           F    G+  +A  NL +VAD  N  +R+I  V  N    T+AG      D+  G  GT+ 
Sbjct: 525 FFIVDGITVDAAGNL-FVADNNNCLIRKIAPVGTNWITTTIAGK-LNSYDFADGV-GTNI 581

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQI---------WEHSTVDGVTRAFSGDGYERNLNG 764
           L N P  +          + M G + +         +  STV    +A+   G+   ++G
Sbjct: 582 LFNQPTGIAVGKGGVVYVVDM-GNNMVRKLTPNGTNYVSSTVAAFPQAY---GF---MDG 634

Query: 765 SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKF 824
           ++S +  FA P+GI++  +   +YV D  +++IR +    G + ++     I        
Sbjct: 635 TNS-DARFAYPTGIAIDTN-DTLYVTDQGNNTIRKV-TPLGTNWMVTTLAGIHAST---- 687

Query: 825 GDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
           G  DG GS  L   P G+   K G ++VAD  N  I+K
Sbjct: 688 GSADGAGSAALFNGPFGIAIDKTGNLFVADLQNSSIRK 725


>gi|170749955|ref|YP_001756215.1| HAD family hydrolase [Methylobacterium radiotolerans JCM 2831]
 gi|170656477|gb|ACB25532.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Methylobacterium radiotolerans JCM 2831]
          Length = 262

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 20/207 (9%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV-----EVTVEDFLPFMGTGE--ANFLGG 131
           + A++FD+DG L  +E+  R+A    FAE+G+     E    D L  MG  E  A+F+  
Sbjct: 2   LRALIFDVDGTLAETEDLHRQAFNRAFAELGLPWRWDEALYADLLAVMGGKERLAHFIDS 61

Query: 132 VASVKGVKGFDSEAAKKRFFEIYLDK---YAKPNSGIGFP---GALELINQCKSKGLKVA 185
                     D+EA   R  EI+  K   Y    +  G P   G   LI + ++ G+++A
Sbjct: 62  AHPA------DAEALHARAPEIHARKTRAYGDLVAQHGLPLRPGIARLIAEARAAGIRLA 115

Query: 186 VASSADRIKVDANLAAAGLP-VSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIV 244
           VA++  R  VD  LAA   P  + FD I + D     KPAPD+FL A   L +P SE + 
Sbjct: 116 VATTTSRPNVDRLLAANFPPGAAPFDVIAAGDEASRKKPAPDVFLLALAGLGIPASEAVA 175

Query: 245 IEDALAGVQAAKAAQMRCIAVTTTLSE 271
            ED+ AG+ +A++A +  +A  +  +E
Sbjct: 176 FEDSAAGISSARSAGLPVLATRSRYTE 202


>gi|301122083|ref|XP_002908768.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099530|gb|EEY57582.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1981

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 49/324 (15%)

Query: 635 IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           ++ +   G  G +DG    + FN P+G+A ++   ++YVADT NH +R ID     V TL
Sbjct: 205 VITVAGDGSAGFQDGLAATSQFNHPRGVAVDSN-GVVYVADTANHRIRIIDPTTKRVSTL 263

Query: 695 AGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE---KVYIAMAGQHQIWEHSTVDGVTR 751
           AG+G +G  +  G   T+   + P DV  +  N     V++A  G H+I      +GV  
Sbjct: 264 AGDGVEG--FVDGPALTAARFSYPSDVAVRESNSGTITVFVADTGNHRI--RQIRNGVVT 319

Query: 752 AFS---GDGYER------------NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796
             S   G G E              +     L   F  P G+++  D + ++VAD+ +  
Sbjct: 320 CLSGLCGAGVETVRLSQQPEKPHAGMADGDPLGARFDSPMGVAVDADGV-VFVADTGNHL 378

Query: 797 IRALNLKTGGSRLLAGG-----DPIFPDNLF-----KFGDRDGMGSEVLLQHPLGVYCAK 846
           IR ++L  G +  +AGG     D   P  L      + G RDG  +    + P  +  A 
Sbjct: 379 IRRIDLD-GTTHTVAGGVVPSEDADTPGCLSPCLRGERGFRDGNLTFARFESPRAI--AI 435

Query: 847 NGQIYVADSYNHKIKKLD------------PASNRVSTLAGIGKAGFKDGAALAAQLSEP 894
             Q  +  S  H+I+++              A+NRV TLAG    G  DG    A  + P
Sbjct: 436 GAQRTLIVSERHRIRRVTYDGGSASTIGTVTAANRVVTLAGSNVPGHIDGEGNEATFNAP 495

Query: 895 AGIIEAQNGNLFIADTNNNIIRYL 918
           AG+  A +G ++ A + +  +R +
Sbjct: 496 AGVTFAADGRVYAASSTDCSVRQV 519



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 707 GEKGTSQLLNSPWDVCYK--PINEKVYIAMAGQHQIWEHSTVDGVTR--AFSGDGYERNL 762
           G+    QL   PW    K  P    V  A+ GQH+       DG T    F   G+    
Sbjct: 94  GDHCAFQLQGIPWSALPKNIPTVTDVPWAVGGQHRY----DYDGATHLCVFLSGGHCL-- 147

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIY---------VADSESSSIRALNLKTGGSRLLAGG 813
              S   T F+Q        +  EI          ++D+E+S I + +    G    A G
Sbjct: 148 ---SPFTTDFSQCDVRCWGSESGEITFKGAHPNRNLSDAETSDIWSYS-PLFGDLGCAQG 203

Query: 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
             I        G +DG+ +     HP GV    NG +YVAD+ NH+I+ +DP + RVSTL
Sbjct: 204 HVITVAGDGSAGFQDGLAATSQFNHPRGVAVDSNGVVYVADTANHRIRIIDPTTKRVSTL 263

Query: 874 AGIGKAGFKDGAAL-AAQLSEPA--GIIEAQNGNL--FIADTNNNIIRYL 918
           AG G  GF DG AL AA+ S P+   + E+ +G +  F+ADT N+ IR +
Sbjct: 264 AGDGVEGFVDGPALTAARFSYPSDVAVRESNSGTITVFVADTGNHRIRQI 313



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%)

Query: 740 IWEHS-------TVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS 792
           IW +S          G     +GDG     +G ++  + F  P G+++  + + +YVAD+
Sbjct: 188 IWSYSPLFGDLGCAQGHVITVAGDGSAGFQDGLAA-TSQFNHPRGVAVDSNGV-VYVADT 245

Query: 793 ESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQI- 850
            +  IR ++  T     LAG G   F D       R    S+V ++       + +G I 
Sbjct: 246 ANHRIRIIDPTTKRVSTLAGDGVEGFVDGPALTAARFSYPSDVAVRE------SNSGTIT 299

Query: 851 -YVADSYNHKIKKL-DPASNRVSTLAGIG-------------KAGFKDGAALAAQLSEPA 895
            +VAD+ NH+I+++ +     +S L G G              AG  DG  L A+   P 
Sbjct: 300 VFVADTGNHRIRQIRNGVVTCLSGLCGAGVETVRLSQQPEKPHAGMADGDPLGARFDSPM 359

Query: 896 GIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTPKSRSP 945
           G+    +G +F+ADT N++IR +DL+     +    +      TP   SP
Sbjct: 360 GVAVDADGVVFVADTGNHLIRRIDLDGTTHTVAGGVVPSEDADTPGCLSP 409


>gi|374984819|ref|YP_004960314.1| putative hydrolase [Streptomyces bingchenggensis BCW-1]
 gi|297155471|gb|ADI05183.1| putative hydrolase [Streptomyces bingchenggensis BCW-1]
          Length = 246

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 68/191 (35%), Positives = 94/191 (49%), Gaps = 9/191 (4%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE-VTVEDFLPFMGTGEANFLGGVASVK 136
           +  AVLFD+DG L +SE     A        GV   T E    F+G G    L  + +  
Sbjct: 15  RTPAVLFDLDGTLVDSEPHYYEAGRLTLERYGVTGFTWEQHSRFIGIGTRETLETLRAEY 74

Query: 137 GVKGFDSE--AAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           G+     E  A K R    YL+      S   FP     + +  + G  +AVAS + R  
Sbjct: 75  GIDAPVDELLAVKNRH---YLELVT--TSATAFPQMRAFVERLHTAGHPLAVASGSSRAA 129

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           ++A L A GL  S+    VSA+     KP PD+FL A+++L    +EC+V+ED+  GV+A
Sbjct: 130 IEAALEATGLG-SLLAVRVSAEEVGRGKPEPDVFLEAARLLGAAPAECVVVEDSAPGVEA 188

Query: 255 AKAAQMRCIAV 265
           A  A MRCIAV
Sbjct: 189 AHRAGMRCIAV 199


>gi|410672075|ref|YP_006924446.1| HAD-superfamily hydrolase [Methanolobus psychrophilus R15]
 gi|409171203|gb|AFV25078.1| HAD-superfamily hydrolase [Methanolobus psychrophilus R15]
          Length = 220

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 19/206 (9%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV--- 135
           +  ++FD DGVL +S     +A V VF E G++V  E+     G   AN +G + ++   
Sbjct: 2   LKGIIFDSDGVLVDSMPYHAQAWVQVFKEEGIDVRKEEIYEVEG---ANHVGVINTMFRK 58

Query: 136 ----KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD 191
                G   +DS   KKR      + + K N    F G LE +   K +  K+AVAS AD
Sbjct: 59  TNKKPGKDNYDSLLTKKR------EHFMKNNKAEPFDGMLECLQSLKGR-YKLAVASGAD 111

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           +  V+ +L     P  +FD  ++ +  EN KP P+ ++ A+  L +   EC+V+E+A  G
Sbjct: 112 KTIVN-DLMDRFYP-GIFDVRITGEDVENGKPDPEPYVKAAGKLGIGAVECMVVENAPLG 169

Query: 252 VQAAKAAQMRCIAVTTTLSEERLKEA 277
           VQ+AK A M C+AV T +  E++  A
Sbjct: 170 VQSAKKAGMYCVAVATYIPPEKVAGA 195


>gi|310642036|ref|YP_003946794.1| haloacid dehalogenase [Paenibacillus polymyxa SC2]
 gi|309246986|gb|ADO56553.1| Haloacid dehalogenase-like hydrolase, putative [Paenibacillus
           polymyxa SC2]
          Length = 244

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 2/187 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           V AV+FDMDGVL +SE          FA  G  +T E+   ++G    +    V     +
Sbjct: 26  VKAVIFDMDGVLVDSEPIYFEVERSSFAHFGAPMTEEEHHTYVGVTLESMWRQVLDRHQL 85

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
                EA       + +         +   G    ++  + KG+ +AVASS+ R  +D  
Sbjct: 86  TNTLEEALAYHRKNV-MQTITAYEGLMAIDGLERWLDWLREKGIPIAVASSSPRSLIDLI 144

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +   GL    FD  ++ +     KPAPDIFL A+++L +    CIVIED+  GV AAK+A
Sbjct: 145 MEKTGLG-RYFDIRITGEEVSQGKPAPDIFLYAAELLGIAPDHCIVIEDSRNGVHAAKSA 203

Query: 259 QMRCIAV 265
            MRCI +
Sbjct: 204 GMRCIGL 210


>gi|290994368|ref|XP_002679804.1| predicted protein [Naegleria gruberi]
 gi|284093422|gb|EFC47060.1| predicted protein [Naegleria gruberi]
          Length = 1359

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 176/380 (46%), Gaps = 73/380 (19%)

Query: 567 AALLFY----GKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNH 622
           A++L Y    G   +++NT +PLS    ++P   T  +  P  +A+D LN+ L IS+   
Sbjct: 341 ASILNYTLSDGNIGIVENTLVPLS---QDEPYRATPIISNPYSIALD-LNSNLLISND-- 394

Query: 623 NRIVVTDLDGNFIVQIGSSGEEGL-----------RDG--SFDDATFNRPQGLAYNAKKN 669
               ++    NF+V++  S                RD   +   +  NRP G++  A  N
Sbjct: 395 ----ISYWTVNFLVKLNKSNTASHSILFGNKFSTSRDAPTNVKSSVLNRPSGVSSFASSN 450

Query: 670 --LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG-----EKGTSQLLNSPWDVC 722
             L++V+DT N  +  I   N T+ T+A     G     G      +G + +  S  + C
Sbjct: 451 DILIFVSDTSNDRVLMISSTNGTISTIANKKDHGISGPSGITTLRREGETYIFFSDSNHC 510

Query: 723 YKPIN--EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780
              I+   K    +AGQ  I  H  +DG+                 +LN++F  PSGI  
Sbjct: 511 VWRIHLLSKTVSLIAGQPGIKGH--IDGI-----------------ALNSTFNHPSGI-- 549

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDG-MGSEVLLQH 838
             ++  IYVADS +  IR + L TG    +AG G+P +        + DG +  E    +
Sbjct: 550 HAEYSAIYVADSNNHVIRKITLSTGIVSTVAGSGEPGY--------NGDGKLPLETQFNN 601

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAG 896
           P+GV  A+ G I VAD+ NH+I+ +   +  V TLAG G  G    +G A+ +QL  P  
Sbjct: 602 PMGVISAQMGLI-VADTNNHRIRVITDVT--VKTLAGTGIDGSSGDEGPAIRSQLFYPHS 658

Query: 897 IIEAQNGNLFIADTNNNIIR 916
           +    + ++++ADT NN IR
Sbjct: 659 VSYGYS-DIYVADTFNNKIR 677



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 139/315 (44%), Gaps = 36/315 (11%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674
           +F SDSNH    +  L     +  G  G +G  DG   ++TFN P G+  +A+ + +YVA
Sbjct: 502 IFFSDSNHCVWRIHLLSKTVSLIAGQPGIKGHIDGIALNSTFNHPSGI--HAEYSAIYVA 559

Query: 675 DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM 734
           D+ NH +R+I      V T+AG+G  G +  G     +Q  N+P  V    +   + +A 
Sbjct: 560 DSNNHVIRKITLSTGIVSTVAGSGEPGYNGDGKLPLETQ-FNNPMGVISAQMG--LIVAD 616

Query: 735 AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS-----SLNTSFAQPSGISLSPDFMEIYV 789
              H+I      D   +  +G G    ++GSS     ++ +    P   S+S  + +IYV
Sbjct: 617 TNNHRI--RVITDVTVKTLAGTG----IDGSSGDEGPAIRSQLFYPH--SVSYGYSDIYV 668

Query: 790 ADSESSSIRALNLKTGGSRLLAG--GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           AD+ ++ IRA++      R +    G P F       GD D       +  P+ V+   N
Sbjct: 669 ADTFNNKIRAISTTDFNIRTVVSQTGFPGFE------GDGDS-ALTAKINGPMSVHAVAN 721

Query: 848 G----QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903
                 + VAD+ N KI+             G+G  G  + A     +    G+  A N 
Sbjct: 722 SLEEKMVLVADTRNDKIRVYTMKKTIEILAGGVGDLGPSENA-----IGNCLGLTIAPNN 776

Query: 904 NLFIADTNNNIIRYL 918
           +++  D  NN+IR +
Sbjct: 777 DIYFTDVTNNMIRMI 791



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 12/147 (8%)

Query: 775 PSGISLSPDFMEIYVADSESS-SIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
           PSGI+      E Y+  S+S+  +  ++L +    L+AG   I        G  DG+   
Sbjct: 488 PSGITTLRREGETYIFFSDSNHCVWRIHLLSKTVSLIAGQPGIK-------GHIDGIALN 540

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DGAA-LAAQL 891
               HP G++ A+   IYVADS NH I+K+  ++  VST+AG G+ G+  DG   L  Q 
Sbjct: 541 STFNHPSGIH-AEYSAIYVADSNNHVIRKITLSTGIVSTVAGSGEPGYNGDGKLPLETQF 599

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYL 918
           + P G+I AQ G L +ADTNN+ IR +
Sbjct: 600 NNPMGVISAQMG-LIVADTNNHRIRVI 625



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 130/333 (39%), Gaps = 50/333 (15%)

Query: 575 KKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNNRL-----FISDSNHNRIVVTD 629
           + ++  T  P   E D D  L     K  G +++  + N L      ++D+ +++I V  
Sbjct: 687 RTVVSQTGFP-GFEGDGDSAL---TAKINGPMSVHAVANSLEEKMVLVADTRNDKIRVYT 742

Query: 630 LDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND 689
           +     +  G  G+ G  + +  +       GL   A  N +Y  D  N+ +R I   N 
Sbjct: 743 MKKTIEILAGGVGDLGPSENAIGNCL-----GLTI-APNNDIYFTDVTNNMIRMIR--NG 794

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQI---WEHSTV 746
            V T+AGNG  G  Y          L  P  + Y  I   +  +    H+I   +++ T+
Sbjct: 795 IVHTIAGNGGYGF-YADDINSLQTSLAYPSGIAYSKITGDIIFSDRNNHRIRIVYKNGTI 853

Query: 747 DGVT----RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL 802
             +     + FSGDG           N     P+ + L P + +I  +DS +  IR   +
Sbjct: 854 STLAGTGIKGFSGDGLPAK-------NAQLNSPTFLKLIPPYEDIIFSDSNNGRIR--RI 904

Query: 803 KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG--QIYVADSYNHKI 860
           K G    +AG           + + +       L  P G+  + +G  +IY++DS  + I
Sbjct: 905 KDGIITTIAGNGTDTSYGGLYYSNMELSAVSAPLGIPEGITFSNDGKGEIYISDSKYNVI 964

Query: 861 KKLDPASNRVSTLAGIGKAGFKDGAALAAQLSE 893
            K+ P                KDG  L+  ++E
Sbjct: 965 YKMKPYC--------------KDGYVLSMTMTE 983



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 3/72 (4%)

Query: 850 IYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA 908
           I+ +DS NH + ++   S  VS +AG  G  G  DG AL +  + P+GI  A+   +++A
Sbjct: 502 IFFSDS-NHCVWRIHLLSKTVSLIAGQPGIKGHIDGIALNSTFNHPSGI-HAEYSAIYVA 559

Query: 909 DTNNNIIRYLDL 920
           D+NN++IR + L
Sbjct: 560 DSNNHVIRKITL 571



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 50/325 (15%)

Query: 615 LFISDSNHNRI---VVTDLDGNFIV-QIGSSGEEGLRDGSFDDATFNRP---QGLAYNAK 667
           ++++D+ +N+I     TD +   +V Q G  G EG  D +   A  N P     +A + +
Sbjct: 666 IYVADTFNNKIRAISTTDFNIRTVVSQTGFPGFEGDGDSALT-AKINGPMSVHAVANSLE 724

Query: 668 KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQ-LLNSPWDVCYKPI 726
           + ++ VADT N  +R +  +  T+  LAG          G+ G S+  + +   +   P 
Sbjct: 725 EKMVLVADTRNDKIR-VYTMKKTIEILAGGV--------GDLGPSENAIGNCLGLTIAP- 774

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG----YERNLNGSSSLNTSFAQPSGISLSP 782
           N  +Y      + I      +G+    +G+G    Y  ++N   SL TS A PSGI+ S 
Sbjct: 775 NNDIYFTDVTNNMI--RMIRNGIVHTIAGNGGYGFYADDIN---SLQTSLAYPSGIAYSK 829

Query: 783 DFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGM-GSEVLLQHPLG 841
              +I  +D  +  IR +  K G    LAG          K    DG+      L  P  
Sbjct: 830 ITGDIIFSDRNNHRIRIV-YKNGTISTLAGTG-------IKGFSGDGLPAKNAQLNSPTF 881

Query: 842 V-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG--------AALAAQLS 892
           +        I  +DS N +I+++      ++T+AG G      G        +A++A L 
Sbjct: 882 LKLIPPYEDIIFSDSNNGRIRRIKDG--IITTIAGNGTDTSYGGLYYSNMELSAVSAPLG 939

Query: 893 EPAGIIEAQNGN--LFIADTNNNII 915
            P GI  + +G   ++I+D+  N+I
Sbjct: 940 IPEGITFSNDGKGEIYISDSKYNVI 964


>gi|386041015|ref|YP_005959969.1| phosphoglycolate phosphatase [Paenibacillus polymyxa M1]
 gi|343097053|emb|CCC85262.1| phosphoglycolate phosphatase [Paenibacillus polymyxa M1]
          Length = 242

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 2/187 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           V AV+FDMDGVL +SE          FA  G  +T E+   ++G    +    V     +
Sbjct: 24  VKAVIFDMDGVLVDSEPIYFEVERSSFAHFGAPMTEEEHHTYVGVTLESMWRQVLDRHQL 83

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
                EA       + +         +   G    ++  + KG+ +AVASS+ R  +D  
Sbjct: 84  TNTLEEALAYHRKNV-MQTITAYEGLMAIDGLERWLDWLREKGIPIAVASSSPRSLIDLI 142

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +   GL    FD  ++ +     KPAPDIFL A+++L +    CIVIED+  GV AAK+A
Sbjct: 143 MEKTGLG-RYFDIRITGEEVSQGKPAPDIFLYAAELLGIAPDHCIVIEDSRNGVHAAKSA 201

Query: 259 QMRCIAV 265
            MRCI +
Sbjct: 202 GMRCIGL 208


>gi|24372026|ref|NP_716068.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Shewanella oneidensis
           MR-1]
 gi|24345893|gb|AAN53513.1| 2-deoxyglucose-6-phosphate hydrolase YniC [Shewanella oneidensis
           MR-1]
          Length = 217

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGVL +SE   +R   +V + +GV VT+E      G      +         
Sbjct: 6   IQAVIFDMDGVLIDSEPLWQRVEYEVLSALGVPVTLETIQQTTGLRIDQCVDYWYHKAPW 65

Query: 139 KGFDSEAAKKRFFEIYLDKYAKP--NSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
             +D+    K      +DK A+    +G   PG  + +  C++KGLK+ +A+S+  + +D
Sbjct: 66  ADYDNAKVSKTI----VDKVAEEILQTGEPMPGVQQAMAYCQAKGLKIGLATSSPTVLID 121

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
           A LA   L    F A+ SA+A    KP P+++L+ +  L V    C+ IED+  G+ AA+
Sbjct: 122 AVLARLKLK-GQFMAVESAEALTYGKPHPEVYLNCATALGVDPRYCLAIEDSFNGIIAAR 180

Query: 257 AAQMRCIAV 265
           AA M+ +A+
Sbjct: 181 AANMQTVAI 189


>gi|290975027|ref|XP_002670245.1| predicted protein [Naegleria gruberi]
 gi|284083802|gb|EFC37501.1| predicted protein [Naegleria gruberi]
          Length = 1363

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 134/267 (50%), Gaps = 18/267 (6%)

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG--TSQ 713
           F  PQ LA  +  ++L V+D   HA+++I+  +  + T+AGNGT G    GG+ G   + 
Sbjct: 45  FKDPQKLARLSNGDIL-VSDALGHAIKKINVTSGVITTIAGNGTAG---FGGDNGPAVNA 100

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
           L+N P+ +     +E +Y A +G ++I +      +T           ++G  + N +  
Sbjct: 101 LVNKPFGIAVSQTDE-IYFADSGNNRIRKIDLTGTITTVVGTGDATPFIDGDLATNCTIN 159

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            P  +SLS    E+Y+AD  +  IR + L  G     AG            GD  G+ + 
Sbjct: 160 TPMDVSLSTS-GELYIADMYNYRIRKV-LTNGTIVTFAG-----SGQSGHTGD-GGLATN 211

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQL 891
             +    GV    NG++Y++DS+N K++K+D  +  ++T+AG G A +   +  A AA L
Sbjct: 212 AAMALAYGVKVFSNGEVYISDSFNFKVRKVD-VNGTITTVAGSGVAPYSGDNILATAANL 270

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYL 918
           + P+ +     G L IADTNNN IR +
Sbjct: 271 NYPSDVFRFDTGELVIADTNNNRIRLV 297



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 31/275 (11%)

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
           F  PQ +A  +  +++ V+DT +H++++I +    +  +AG G  G    GG    +QL 
Sbjct: 406 FKDPQKIAKLSNGDII-VSDTGDHSIKKISYSTGVISRIAGTGVAGFSGDGGLASQAQL- 463

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQI------WEHSTVDGVTRAFSGDGYERNLNGSSSLN 769
           N P+ +     N+++YIA    H+I         STV G +  FSGD     L  ++ LN
Sbjct: 464 NKPYGIAITA-NDEIYIADNLNHRIRFVDVNGNISTVAGTSIGFSGD---SGLATAAKLN 519

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDN-LFKFGDRD 828
                P  +SLS    ++Y+AD ++  IR         R+ +G    F  N    +    
Sbjct: 520 ----APMDVSLSAS-GDLYIADRDNYRIR---------RVSSGVISTFAGNGQSGYSGDG 565

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK-DG-AA 886
           G  +   L    GV    NG++Y++DS N+K++K+D  S  ++T+AG G A F  DG  A
Sbjct: 566 GQATSAALSQAYGVKVI-NGEVYISDSNNYKVRKVD-GSGIITTIAGSGAAPFNGDGLMA 623

Query: 887 LAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
            ++ ++ P  +    +G + IADT+N  IR + LN
Sbjct: 624 TSSNMNHPTDVALLPSGEMIIADTDNYRIRMVLLN 658



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 154/340 (45%), Gaps = 56/340 (16%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGS-----SGEEGLRDGSFDDATFNRPQGLAYNA 666
           N  ++ISDS + ++   D++G      GS     SG+  L       A  N P  + +  
Sbjct: 225 NGEVYISDSFNFKVRKVDVNGTITTVAGSGVAPYSGDNILATA----ANLNYPSDV-FRF 279

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
               L +ADT N+ +R +   N T+ T AGNGT  + +  GE      L+ P  +    I
Sbjct: 280 DTGELVIADTNNNRIRLV-MPNGTIITTAGNGT--ASFSDGEFAEENGLSLPTGLVL--I 334

Query: 727 NEKVYIAMAGQHQI----------WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
              + IA AG  +I          +  ST+D  +   SG G     N     N  F  P+
Sbjct: 335 QNGLLIADAGNKRIRLLQRTIFSCYGKSTLD--SNVCSGQGRCVG-NNICQCNAGFEGPT 391

Query: 777 GI-------SLSPDFME-----------IYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818
            +       +++ DF +           I V+D+   SI+ ++  TG    +AG      
Sbjct: 392 CLPSKYYITTVATDFKDPQKIAKLSNGDIIVSDTGDHSIKKISYSTGVISRIAG------ 445

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG--I 876
             +  F    G+ S+  L  P G+    N +IY+AD+ NH+I+ +D   N +ST+AG  I
Sbjct: 446 TGVAGFSGDGGLASQAQLNKPYGIAITANDEIYIADNLNHRIRFVDVNGN-ISTVAGTSI 504

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           G +G   G A AA+L+ P  +  + +G+L+IAD +N  IR
Sbjct: 505 GFSG-DSGLATAAKLNAPMDVSLSASGDLYIADRDNYRIR 543



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 149/319 (46%), Gaps = 37/319 (11%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSF-DDATFN 657
            K P K+A  + N  + +SD+  + I         I +I  +G  G   DG     A  N
Sbjct: 406 FKDPQKIA-KLSNGDIIVSDTGDHSIKKISYSTGVISRIAGTGVAGFSGDGGLASQAQLN 464

Query: 658 RPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG--TSQLL 715
           +P G+A  A   + Y+AD  NH +R +D VN  + T+AG     S    G+ G  T+  L
Sbjct: 465 KPYGIAITANDEI-YIADNLNHRIRFVD-VNGNISTVAGTSIGFS----GDSGLATAAKL 518

Query: 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE-RNLNGSSSLNTSFAQ 774
           N+P DV      + +YIA    ++I   S+  GV   F+G+G    + +G  + + + +Q
Sbjct: 519 NAPMDVSLSASGD-LYIADRDNYRIRRVSS--GVISTFAGNGQSGYSGDGGQATSAALSQ 575

Query: 775 PSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL-----AGGDPIFPDNLFKFGDRDG 829
             G+ +     E+Y++DS +  +R    K  GS ++     +G  P   D L        
Sbjct: 576 AYGVKVING--EVYISDSNNYKVR----KVDGSGIITTIAGSGAAPFNGDGL-------- 621

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK--AGFKDGAAL 887
           M +   + HP  V    +G++ +AD+ N++I+ +      V T+AG G   +    G A 
Sbjct: 622 MATSSNMNHPTDVALLPSGEMIIADTDNYRIRMVLLNGTMV-TIAGNGNYVSSGDYGLAT 680

Query: 888 AAQLSEPAGIIEAQNGNLF 906
           +A L  P GI+  Q+G +F
Sbjct: 681 SAGLKLPTGILITQDGIMF 699



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 17/215 (7%)

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS--SLNTSFAQPSGISLSPDF 784
           N  + ++ A  H I + +   GV    +G+G      G +  ++N    +P GI++S   
Sbjct: 56  NGDILVSDALGHAIKKINVTSGVITTIAGNG-TAGFGGDNGPAVNALVNKPFGIAVSQT- 113

Query: 785 MEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
            EIY ADS ++ IR ++L    + ++  GD         F D D + +   +  P+ V  
Sbjct: 114 DEIYFADSGNNRIRKIDLTGTITTVVGTGDAT------PFIDGD-LATNCTINTPMDVSL 166

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEPAGIIEAQN 902
           + +G++Y+AD YN++I+K+   +  + T AG G++G      LA  A ++   G+    N
Sbjct: 167 STSGELYIADMYNYRIRKV-LTNGTIVTFAGSGQSGHTGDGGLATNAAMALAYGVKVFSN 225

Query: 903 GNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQP 937
           G ++I+D+ N  +R +D+N     + T+   GV P
Sbjct: 226 GEVYISDSFNFKVRKVDVNG---TITTVAGSGVAP 257



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 126/311 (40%), Gaps = 78/311 (25%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF-DDATFNRPQGLAYNAKKNLL 671
           + ++ +DS +NRI   DL G     +G+       DG    + T N P  ++ +     L
Sbjct: 114 DEIYFADSGNNRIRKIDLTGTITTVVGTGDATPFIDGDLATNCTINTPMDVSLSTSGE-L 172

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP---INE 728
           Y+AD  N+ +R++   N T+ T AG+G  G    GG        N+   + Y      N 
Sbjct: 173 YIADMYNYRIRKV-LTNGTIVTFAGSGQSGHTGDGGLA-----TNAAMALAYGVKVFSNG 226

Query: 729 KVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           +VYI+ +   ++ +   V+G     +G G                      ++P     Y
Sbjct: 227 EVYISDSFNFKVRKVD-VNGTITTVAGSG----------------------VAP-----Y 258

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
             D+  ++   LN               +P ++F+F                       G
Sbjct: 259 SGDNILATAANLN---------------YPSDVFRF---------------------DTG 282

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA-ALAAQLSEPAGIIEAQNGNLFI 907
           ++ +AD+ N++I+ + P    ++T AG G A F DG  A    LS P G++  QNG L I
Sbjct: 283 ELVIADTNNNRIRLVMPNGTIITT-AGNGTASFSDGEFAEENGLSLPTGLVLIQNG-LLI 340

Query: 908 ADTNNNIIRYL 918
           AD  N  IR L
Sbjct: 341 ADAGNKRIRLL 351


>gi|412985326|emb|CCO20351.1| predicted protein [Bathycoccus prasinos]
          Length = 897

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 117/256 (45%), Gaps = 28/256 (10%)

Query: 646 LRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQ 705
             DG   +A FN+P G+  +     +++ADT NH +R ID    TV TLAG G  GS   
Sbjct: 118 FHDGPSLEARFNKPFGVVASPDGRDIFIADTFNHRIRRIDVEFGTVTTLAGTGASGSA-D 176

Query: 706 GGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD---GYERNL 762
           G  K        P  V   P    VY+A    H+I       GV R  +G    GY  +L
Sbjct: 177 GLAKRGDATFKFPSGVAVSPDGGFVYVADTKNHKIRVIILGSGVVRTVAGSGLTGYHDDL 236

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
            G+ +    F QP  + + PD   ++V+D+ ++ IR +++++G    L G     P    
Sbjct: 237 VGTKA---RFNQPMDVVMHPDGHTLFVSDAMNNCIRKVDVQSGEVTTLTGDK--LP---- 287

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKN------GQ-------IYVADSYNHKIKKLDPASNR 869
             G  DG+ S      P+G+ C+ N      G+       + VAD+ NH ++ ++  +  
Sbjct: 288 --GMIDGIKSNARFLQPMGMSCSTNTVLDGGGKSSNKCTFLAVADAGNHAVRLVNTETGA 345

Query: 870 VSTLAGIGKAGFKDGA 885
           V TLAG    G+K  A
Sbjct: 346 VVTLAGGKSRGYKGNA 361



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 17/213 (7%)

Query: 615 LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDG--SFDDATFNRPQGLAYNAKKNLLY 672
           +FI+D+ ++RI   D++   +  +  +G  G  DG     DATF  P G+A +     +Y
Sbjct: 143 IFIADTFNHRIRRIDVEFGTVTTLAGTGASGSADGLAKRGDATFKFPSGVAVSPDGGFVY 202

Query: 673 VADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732
           VADT+NH +R I   +  VRT+AG+G  G  Y     GT    N P DV   P    +++
Sbjct: 203 VADTKNHKIRVIILGSGVVRTVAGSGLTG--YHDDLVGTKARFNQPMDVVMHPDGHTLFV 260

Query: 733 AMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME------ 786
           + A  + I +     G     +GD     ++G  S N  F QP G+S S + +       
Sbjct: 261 SDAMNNCIRKVDVQSGEVTTLTGDKLPGMIDGIKS-NARFLQPMGMSCSTNTVLDGGGKS 319

Query: 787 ------IYVADSESSSIRALNLKTGGSRLLAGG 813
                 + VAD+ + ++R +N +TG    LAGG
Sbjct: 320 SNKCTFLAVADAGNHAVRLVNTETGAVVTLAGG 352



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 13/168 (7%)

Query: 767 SLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFG 825
           SL   F +P G+  SPD  +I++AD+ +  IR ++++ G    LAG G     D L K G
Sbjct: 123 SLEARFNKPFGVVASPDGRDIFIADTFNHRIRRIDVEFGTVTTLAGTGASGSADGLAKRG 182

Query: 826 DRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG 884
           D          + P GV  + +G  +YVAD+ NHKI+ +   S  V T+AG G  G+ D 
Sbjct: 183 D-------ATFKFPSGVAVSPDGGFVYVADTKNHKIRVIILGSGVVRTVAGSGLTGYHDD 235

Query: 885 -AALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTL 930
                A+ ++P  ++   +G+ LF++D  NN IR +D+  +  E+ TL
Sbjct: 236 LVGTKARFNQPMDVVMHPDGHTLFVSDAMNNCIRKVDV--QSGEVTTL 281



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 26/232 (11%)

Query: 715 LNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNG-SSSLNTSFA 773
            N P+ V   P    ++IA    H+I       G     +G G   + +G +   + +F 
Sbjct: 128 FNKPFGVVASPDGRDIFIADTFNHRIRRIDVEFGTVTTLAGTGASGSADGLAKRGDATFK 187

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGS 832
            PSG+++SPD   +YVAD+++  IR + L +G  R +AG G   + D+L        +G+
Sbjct: 188 FPSGVAVSPDGGFVYVADTKNHKIRVIILGSGVVRTVAGSGLTGYHDDL--------VGT 239

Query: 833 EVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
           +     P+ V    +G  ++V+D+ N+ I+K+D  S  V+TL G    G  DG    A+ 
Sbjct: 240 KARFNQPMDVVMHPDGHTLFVSDAMNNCIRKVDVQSGEVTTLTGDKLPGMIDGIKSNARF 299

Query: 892 SEPAGIIEAQN-------------GNLFIADTNNNIIRYLDLNKEEPELQTL 930
            +P G+  + N               L +AD  N+ +R   +N E   + TL
Sbjct: 300 LQPMGMSCSTNTVLDGGGKSSNKCTFLAVADAGNHAVRL--VNTETGAVVTL 349



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 795 SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVA 853
           S+ R     T GS        + P  LF     DG   E     P GV  + +G+ I++A
Sbjct: 91  SARRFAKQDTRGSSSYDPSRALHPSMLF----HDGPSLEARFNKPFGVVASPDGRDIFIA 146

Query: 854 DSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA--AQLSEPAGI-IEAQNGNLFIADT 910
           D++NH+I+++D     V+TLAG G +G  DG A    A    P+G+ +    G +++ADT
Sbjct: 147 DTFNHRIRRIDVEFGTVTTLAGTGASGSADGLAKRGDATFKFPSGVAVSPDGGFVYVADT 206

Query: 911 NNNIIRYLDL 920
            N+ IR + L
Sbjct: 207 KNHKIRVIIL 216



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF-DDATF 656
           +  KFP  +A+      ++++D+ +++I V  L    +  +  SG  G  D      A F
Sbjct: 184 ATFKFPSGVAVSPDGGFVYVADTKNHKIRVIILGSGVVRTVAGSGLTGYHDDLVGTKARF 243

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN-------GTKGSDYQGGEK 709
           N+P  +  +   + L+V+D  N+ +R++D  +  V TL G+       G K +       
Sbjct: 244 NQPMDVVMHPDGHTLFVSDAMNNCIRKVDVQSGEVTTLTGDKLPGMIDGIKSNARFLQPM 303

Query: 710 GTSQLLNSPWDVCYKPINEKVYIAMA--GQHQIWEHSTVDGVTRAFSGDGYERNLNGSS- 766
           G S   N+  D   K  N+  ++A+A  G H +   +T  G     +G G  R   G++ 
Sbjct: 304 GMSCSTNTVLDGGGKSSNKCTFLAVADAGNHAVRLVNTETGAVVTLAG-GKSRGYKGNAL 362

Query: 767 SLNTSFAQPSGISLSP 782
            ++T FA+P+ +S  P
Sbjct: 363 GIDTLFAKPTAVSFVP 378


>gi|312878784|ref|ZP_07738584.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Aminomonas
           paucivorans DSM 12260]
 gi|310782075|gb|EFQ22473.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Aminomonas
           paucivorans DSM 12260]
          Length = 216

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           ++AVL+D+DGVL ++ E   RA  +   E  +    + F    G   A  L  V      
Sbjct: 3   LAAVLWDLDGVLADTGELHYRAWQEACDEEKIPFDRDLFARTFGRNNAGALEVVLGHVPE 62

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGI--GFPGALELINQCKSKGLKVAVASSADRIKVD 196
           +GF      +RF E     +    +G     PG    +   + +GLK AVASS     ++
Sbjct: 63  EGF-----LRRFVERKEGLFRARAAGTVRPIPGVEGWLRAFRDRGLKQAVASSGPPENLE 117

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
           A L + G  +S FDA+VS       KP P +FL A+++L VP + C+V+EDA+ GV+AA+
Sbjct: 118 AVLGSLGF-LSYFDAVVSGAELPG-KPQPHVFLRAAELLGVPPASCLVVEDAVVGVRAAR 175

Query: 257 AAQMRCIAVTTTLSEERLKEA 277
           AA M+ +AV TT   E L EA
Sbjct: 176 AAGMKVVAVATTHPAEALGEA 196


>gi|223939922|ref|ZP_03631790.1| NHL repeat containing protein [bacterium Ellin514]
 gi|223891413|gb|EEF57906.1| NHL repeat containing protein [bacterium Ellin514]
          Length = 359

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 17/301 (5%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD--GSFDDATFNRPQGLAYNAKKN 669
           +  L+I D+ ++RI     DGN I  +  +GE G     G    A  N P  +  +  +N
Sbjct: 62  DGSLYICDTENHRIRKVTADGN-ISTVAGTGEHGWSGDGGPATAAKLNEPYEVRLDQAEN 120

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
           L +V +  +H +R+ D     V T+AGNGT G    GG    +Q+ N P  + +      
Sbjct: 121 LFWV-ERLSHTVRKCDAKTGIVTTIAGNGTAGFSGDGGPATKAQM-NEPHSIGFDKAG-N 177

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           +YI     H+I +     G+   F G G  +   +G++  N     P  +   PD   ++
Sbjct: 178 LYICDVRNHRIRKVDMKSGMISTFCGTGERKPTPDGTAIGNAPLNGPRALDFGPD-GNLW 236

Query: 789 VADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           VA  E +++  ++++ G    +AG G   F  N        G       + P G+  A N
Sbjct: 237 VALREGNAVYKIDMEKGRIFHVAGTGKNGFTGN-------GGPAKAATFKGPKGLSVASN 289

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG-FKDGAALAAQLSEPAGIIEAQNGNLF 906
           G ++VAD+ NH I+ ++  S ++  + G G  G   +G     QL+ P G+   ++G + 
Sbjct: 290 GNVFVADTENHAIRMIEAKSGKIFLVTGTGLRGDGPEGELGKCQLARPHGVFADKDGRIL 349

Query: 907 I 907
           +
Sbjct: 350 L 350



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 16/290 (5%)

Query: 635 IVQIGSSGEEGLR-DGSF-DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692
           I     +G++G   DG+    A  N P G+   +  +L Y+ DTENH +R++   +  + 
Sbjct: 28  ISNFAGNGKKGFSGDGAAAKGAELNGPTGIVRGSDGSL-YICDTENHRIRKVT-ADGNIS 85

Query: 693 TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752
           T+AG G  G    GG   T+  LN P++V      E ++      H + +     G+   
Sbjct: 86  TVAGTGEHGWSGDGG-PATAAKLNEPYEVRLDQA-ENLFWVERLSHTVRKCDAKTGIVTT 143

Query: 753 FSGDGYER-NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLA 811
            +G+G    + +G  +      +P  I        +Y+ D  +  IR +++K+G      
Sbjct: 144 IAGNGTAGFSGDGGPATKAQMNEPHSIGFDKA-GNLYICDVRNHRIRKVDMKSGMISTFC 202

Query: 812 GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVS 871
           G     P       D   +G+   L  P  +    +G ++VA    + + K+D    R+ 
Sbjct: 203 GTGERKPTP-----DGTAIGN-APLNGPRALDFGPDGNLWVALREGNAVYKIDMEKGRIF 256

Query: 872 TLAGIGKAGF--KDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
            +AG GK GF    G A AA    P G+  A NGN+F+ADT N+ IR ++
Sbjct: 257 HVAGTGKNGFTGNGGPAKAATFKGPKGLSVASNGNVFVADTENHAIRMIE 306



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 13/236 (5%)

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749
           ++   AGNG KG    G     ++L N P  +  +  +  +YI     H+I    T DG 
Sbjct: 27  SISNFAGNGKKGFSGDGAAAKGAEL-NGPTGIV-RGSDGSLYICDTENHRI-RKVTADGN 83

Query: 750 TRAFSGDG-YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR 808
               +G G +  + +G  +      +P  + L      ++  +  S ++R  + KTG   
Sbjct: 84  ISTVAGTGEHGWSGDGGPATAAKLNEPYEVRLD-QAENLFWVERLSHTVRKCDAKTGIVT 142

Query: 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN 868
            +AG      +    F    G  ++  +  P  +   K G +Y+ D  NH+I+K+D  S 
Sbjct: 143 TIAG------NGTAGFSGDGGPATKAQMNEPHSIGFDKAGNLYICDVRNHRIRKVDMKSG 196

Query: 869 RVSTLAGIG-KAGFKDGAALA-AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922
            +ST  G G +    DG A+  A L+ P  +    +GNL++A    N +  +D+ K
Sbjct: 197 MISTFCGTGERKPTPDGTAIGNAPLNGPRALDFGPDGNLWVALREGNAVYKIDMEK 252


>gi|300866539|ref|ZP_07111229.1| Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Oscillatoria sp. PCC 6506]
 gi|300335496|emb|CBN56389.1| Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Oscillatoria sp. PCC 6506]
          Length = 210

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           I+PEF     WLN+ PL+   DLKG VV++ FWT+ CINC   LP +    ++Y +    
Sbjct: 70  ILPEFQGISQWLNSPPLKIS-DLKGSVVLVQFWTFACINCQRTLPYITRWHRQYAERGLK 128

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           ++G+H+ +F  E+D+  ++ A+  Y I++PV  D +   W       WP   +    G  
Sbjct: 129 IIGIHTPEFPFERDVNNVKKALKEYQITYPVPLDNEFKTWLAYKNEYWPHLFLADRQGIR 188

Query: 549 LAQLAGEGHRKDLDDLVEAAL 569
                GEG   + +  +   L
Sbjct: 189 RYNHIGEGAYDETEQTIRQLL 209


>gi|312623279|ref|YP_004024892.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203746|gb|ADQ47073.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 254

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 25/211 (11%)

Query: 77  GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVK 136
           GK+ A +FDMDGVL ++ +   +A   +F   G +   ED+  +   G+   L G+ S+ 
Sbjct: 33  GKIKAAIFDMDGVLTDTVKLHFKAWKKMFENHGYKFEYEDY-KWKVDGKPR-LDGIRSI- 89

Query: 137 GVKGFD---------SEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVA 187
               +D         +E  +K F E     + +  +   F  ++ L+N  K   +++AVA
Sbjct: 90  ---AYDMPEDKLIEMAEEKQKIFLE-----FVEQENLEAFEDSIWLLNHLKQNNIRLAVA 141

Query: 188 SSA-DRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIE 246
           SS+ +  K+   L   G+  +MFD IV+   F+  KP P+IFL+A++ LNV   EC+V E
Sbjct: 142 SSSKNTTKI---LTKIGIH-NMFDTIVTGYDFKKGKPDPEIFLTAAQRLNVNPKECVVFE 197

Query: 247 DALAGVQAAKAAQMRCIAVTTTLSEERLKEA 277
           DA+ GV+A   A M  I V      +RLKEA
Sbjct: 198 DAIDGVKAGIRAGMLTIGVCRDGQFDRLKEA 228


>gi|297545175|ref|YP_003677477.1| HAD superfamily hydrolase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842950|gb|ADH61466.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 226

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ +SE    +   ++F  +G+E++ E+ L F+G         +     +
Sbjct: 2   IKAVVFDMDGVIIDSEPIHIKLENELFKSLGLEISEEEHLTFVGASSYYMWRKIKERFNL 61

Query: 139 -KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSA--DRIKV 195
            +  +    K R  ++YLD   +    I   G  E + +   K  K+AVASS+  D IK 
Sbjct: 62  PQSVEELVEKDR--KMYLDHVLRTGEIIPIEGITETVKKLFEKKYKLAVASSSPIDVIK- 118

Query: 196 DANLAAAGLPV-SMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
              L    L + + F+ +VS D  EN KP+PDIFL  +  L V   EC+VIED+  GV  
Sbjct: 119 ---LVVKKLAIDNCFEVLVSGDYVENSKPSPDIFLYTAAKLKVKPYECVVIEDSYNGVHG 175

Query: 255 AKAAQMRCIA 264
           AK A M  I 
Sbjct: 176 AKKAGMTVIG 185


>gi|343085343|ref|YP_004774638.1| HAD superfamily hydrolase [Cyclobacterium marinum DSM 745]
 gi|342353877|gb|AEL26407.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Cyclobacterium
           marinum DSM 745]
          Length = 218

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 17/204 (8%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEAN------FLGG 131
           K  AV+FDMDGV+C++      A    F + G+  T E+F   M  G++N      FLG 
Sbjct: 2   KNQAVIFDMDGVICHTNPFHSEAFKVFFGKRGLNPTEEEFENHM-YGKSNKYIFKHFLG- 59

Query: 132 VASVKGVKGFDSEAAKKRFF-EIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSA 190
              + G +    E  K+  F EIY DK       I  P  L  +   K+ G +  VA+SA
Sbjct: 60  -REIVGEEFISLENEKEGLFREIYADKI------ITLPEFLPFLETLKNDGFRTGVATSA 112

Query: 191 DRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALA 250
            R  +D  + A      M ++I++++  +N KP P+++L+++K+L+V    C+V ED+ +
Sbjct: 113 PRANLDLIMGALKFAPKM-ESILASENVKNHKPDPEVYLTSAKLLDVNPENCLVFEDSFS 171

Query: 251 GVQAAKAAQMRCIAVTTTLSEERL 274
           GV AA  A M+ + V ++  +E L
Sbjct: 172 GVTAAINAGMKVVGVLSSHKQEEL 195


>gi|220931859|ref|YP_002508767.1| HAD family hydrolase [Halothermothrix orenii H 168]
 gi|219993169|gb|ACL69772.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Halothermothrix
           orenii H 168]
          Length = 217

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 3/186 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGV+ NSE    +    ++ ++G++V   ++  F+G    +    +     +
Sbjct: 2   IEAVIFDMDGVIINSEPIHYKVNQIIYEKLGIKVPRSEYNTFIGKSNTDIWSFLKRKYNL 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
           K   S   +K+       KY K +     PG   L+++   K +   +ASS+  I ++  
Sbjct: 62  KESVSSLIEKQISGNI--KYLKSHEVNPIPGVKPLLDELSEKQITTGLASSSPEIYIETV 119

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           L   GL  S F   VS +     KP PDIF  A++IL V    C+VIED+  GV AAKAA
Sbjct: 120 LEELGLK-SYFKVTVSGETVARGKPEPDIFEKAARILGVEPPHCVVIEDSKNGVNAAKAA 178

Query: 259 QMRCIA 264
            M CI 
Sbjct: 179 GMICIG 184


>gi|334138737|ref|ZP_08512147.1| HAD hydrolase, family IA, variant 3 [Paenibacillus sp. HGF7]
 gi|333603714|gb|EGL15118.1| HAD hydrolase, family IA, variant 3 [Paenibacillus sp. HGF7]
          Length = 237

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 67  DVNVSSESKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEA 126
           D+N  SE K   + AVLFDMDGVL +SE          F   GV V+ ED   F+G    
Sbjct: 3   DLN-KSEWKAASIKAVLFDMDGVLIDSEPIYFDIERSSFDHFGVPVSEEDHHSFVGVTLE 61

Query: 127 NFLGGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSG----IGFPGALELINQCKSKGL 182
           +    +     +       A ++    + D      SG       P A   ++  K K +
Sbjct: 62  SMWEQILDKHRIP-----FALEQVLTYHKDNVMTILSGHTELTAMPQAERWLSWLKEKQI 116

Query: 183 KVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSEC 242
            VAVASS+ R  ++  +   GL     D  VS +   + KPAPDIFL A+ +L V  S C
Sbjct: 117 PVAVASSSPRPLIELIMDKTGLG-RYLDVRVSGEEVNHGKPAPDIFLHAAGLLGVEPSSC 175

Query: 243 IVIEDALAGVQAAKAAQMRCIAV 265
           +VIED+  GV AAK+A MRCI +
Sbjct: 176 LVIEDSRNGVIAAKSAGMRCIGL 198


>gi|435851836|ref|YP_007313422.1| haloacid dehalogenase superfamily protein, subfamily IA, variant 3
           with third motif having DD or ED [Methanomethylovorans
           hollandica DSM 15978]
 gi|433662466|gb|AGB49892.1| haloacid dehalogenase superfamily protein, subfamily IA, variant 3
           with third motif having DD or ED [Methanomethylovorans
           hollandica DSM 15978]
          Length = 230

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 9/201 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           +  ++FDMDGVL +S      A   +F +MGV +  +      G    + +  +    G+
Sbjct: 2   LKTLIFDMDGVLVDSMPYHVEAMQHIFDQMGVYMDQQVIYEREGEKTIDIIRLLLEKAGI 61

Query: 139 KG--FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVD 196
               FD E+  +++ E + +     N+  G P  LE++    +    +AV S AD+  V 
Sbjct: 62  DNGRFDLESIVEKYIEEF-NIIVVLNAFEGMPECLEVLKNRYA----LAVVSGADKPIVH 116

Query: 197 ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256
           + L +  L   +F  +V+ D   N KPAPD +L A ++LN+  +ECIVIE+A  G+QAAK
Sbjct: 117 SVLNS--LYPGLFSVVVTGDDVANGKPAPDPYLKALEMLNMQKNECIVIENAPVGIQAAK 174

Query: 257 AAQMRCIAVTTTLSEERLKEA 277
           AA + CIAV T L  + L +A
Sbjct: 175 AAGLCCIAVPTYLDPQELHQA 195


>gi|428937291|ref|ZP_19010598.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           JHCK1]
 gi|428937692|ref|ZP_19010900.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           JHCK1]
 gi|426295722|gb|EKV58534.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           JHCK1]
 gi|426296574|gb|EKV59185.1| putative cytochrome c biogenesis protein [Klebsiella pneumoniae
           JHCK1]
          Length = 173

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       W+N+  L   R LKG VV++DFWT  CINC H LP +     KY+     V
Sbjct: 30  MPSLAGGSAWINSPALTPER-LKGNVVLVDFWTRECINCQHTLPYVRDWANKYRAAGLVV 88

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ ++  E+ L  +R AV  + I++PVV D +  +W   G   WP   +    G+L 
Sbjct: 89  IGVHTPEYPWERSLPLLRQAVKDWRITYPVVADNEYAIWNAFGNQYWPAHYIFDARGQLR 148

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG     + +++  L
Sbjct: 149 YTAFGEGDYARQEQVIQQLL 168


>gi|229816147|ref|ZP_04446458.1| hypothetical protein COLINT_03195 [Collinsella intestinalis DSM
           13280]
 gi|229808273|gb|EEP44064.1| hypothetical protein COLINT_03195 [Collinsella intestinalis DSM
           13280]
          Length = 227

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 28/230 (12%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGE-------ANFLGG 131
           + A+LFDMDG L +SE   ++A      EMG+E+  +    F+G          A +LGG
Sbjct: 4   IQAILFDMDGTLVDSERVGQKAWAATAGEMGIEIPDDLVRAFIGRPSQSCRAMLAEYLGG 63

Query: 132 VASVKGVKGFDSEAAKKRF---FEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVAS 188
                     D++ A + F    E++L K+ + +  +  PGA+E++   K+ GL +A+A+
Sbjct: 64  ----------DADLANRVFDLHIELFL-KFVETDLELK-PGAIEVLEALKAAGLPLAIAT 111

Query: 189 SADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDA 248
           S  R++    L    + +  FD+I   D  EN KPAPDIF+ +++ L    + C VIED+
Sbjct: 112 STARVRALPRLERFDM-LKYFDSITCGDEIENGKPAPDIFVESARRLGCDPALCAVIEDS 170

Query: 249 LAGVQAAKAAQMRC-----IAVTTTLSEERLKEASPSLIRKEIGSVSLND 293
             GV++  A+  R      I   T   EE      P+L        ++ND
Sbjct: 171 HNGVRSGHASGARVFMIPDIVAPTPEIEEMCTAVLPTLHELPAAIAAVND 220


>gi|433653859|ref|YP_007297567.1| haloacid dehalogenase superfamily enzyme, subfamily IA
           [Thermoanaerobacterium thermosaccharolyticum M0795]
 gi|433292048|gb|AGB17870.1| haloacid dehalogenase superfamily enzyme, subfamily IA
           [Thermoanaerobacterium thermosaccharolyticum M0795]
          Length = 219

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 11/188 (5%)

Query: 81  AVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV-K 139
           AV+FDMDGVL +SE        ++F E+G  V++E+   F+GT        V +   +  
Sbjct: 4   AVIFDMDGVLIDSEPLHLELEEEIFKEIGANVSLEEHNSFVGTTSHYMWEYVINKYNIPH 63

Query: 140 GFDS--EAAKKRFFEIYL--DKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
             D   E  +KR+F+  L  D   KP  G+      EL+ +  SK +K+AVASS+    +
Sbjct: 64  TVDELVEMDRKRYFDYILKHDDAVKPIEGVD-----ELVKELYSKKVKLAVASSSPIDVI 118

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           +  +    L    F+ +VS D  +  KP PDIFL A++ LNV   +C+V+ED+  GV AA
Sbjct: 119 ELVVKRLKLK-DYFNELVSGDFVKRSKPYPDIFLYAAEKLNVVPEKCLVVEDSNKGVLAA 177

Query: 256 KAAQMRCI 263
           K+A M+ +
Sbjct: 178 KSAGMKVV 185


>gi|312128452|ref|YP_003993326.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778471|gb|ADQ07957.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 238

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 19/222 (8%)

Query: 77  GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVK 136
           GK+ A +FDMDGVL ++ +   RA   +F   G +   ED+           + G   + 
Sbjct: 2   GKIKAAIFDMDGVLTDTVKLHFRAWKKMFESHGYKFEYEDY--------KLKVDGKPRLD 53

Query: 137 GVKGFDSEAAKKRFFEIYLDK------YAKPNSGIGFPGALELINQCKSKGLKVAVASSA 190
           G++    +  + +  E+  +K      + +  +   F  ++ L+N  K   +K+AVASS+
Sbjct: 54  GIRSIACDVPEDKLIEMAEEKQKIFLEFVEQENLEAFEDSIWLLNHLKQNNIKLAVASSS 113

Query: 191 -DRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
            +  K+   L   G+  +MFD +V+   F+  KP P+IFL+A+K LNV   +C+V EDA+
Sbjct: 114 KNTTKI---LTKIGI-YNMFDTVVTGYDFKKGKPDPEIFLTAAKKLNVNPKDCVVFEDAI 169

Query: 250 AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSL 291
            G++A   A M  I V      +RLKEA   + R +  S+ L
Sbjct: 170 DGIKAGICAGMLTIGVCRDGQFDRLKEAHYVVDRLDKISLEL 211


>gi|293416930|ref|ZP_06659567.1| predicted protein [Escherichia coli B185]
 gi|291431506|gb|EFF04491.1| predicted protein [Escherichia coli B185]
          Length = 216

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 14/192 (7%)

Query: 80  SAVLFDMDGVLCNSEEPSRRAAVDVFAE-MGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           SAV+FDMDGVL +SE   R    + +    G+ +  EDF PF G     FL  +     +
Sbjct: 3   SAVIFDMDGVLVDSEPVWREVECEYYLRNYGLSLQREDFDPFTGMPVTIFLRKLHQRHAL 62

Query: 139 KGFDSEAAKKRFFEIYLDKYA-----KPNSGIGFPGALELINQCKSKGLKVAVASSADRI 193
                E   ++  +  +++ A     KP      PG  EL+N      + +AVASS+ + 
Sbjct: 63  ----PEDNLRQVHDTIVEEVARRIRLKPAP---LPGVYELLNHLHQHNIPLAVASSSPQR 115

Query: 194 KVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
           ++D  L+   +    F A++SA+   + KP P+IFL+A+ +       C+VIED+L GV 
Sbjct: 116 QIDNVLSTLNM-RHYFSAVISAEGLAHGKPHPEIFLTAALMTGQEPEFCLVIEDSLNGVV 174

Query: 254 AAKAAQMRCIAV 265
           AAKAA M  IA+
Sbjct: 175 AAKAAGMHVIAL 186


>gi|195977798|ref|YP_002123042.1| phosphoglycolate phosphatase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|414563605|ref|YP_006042566.1| phosphoglycolate phosphatase [Streptococcus equi subsp.
           zooepidemicus ATCC 35246]
 gi|195974503|gb|ACG62029.1| phosphoglycolate phosphatase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|338846670|gb|AEJ24882.1| phosphoglycolate phosphatase [Streptococcus equi subsp.
           zooepidemicus ATCC 35246]
          Length = 213

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 97/191 (50%), Gaps = 17/191 (8%)

Query: 80  SAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVK--- 136
           ++++FDMDGV+ +SE         +  + G++        FMGT    F     ++K   
Sbjct: 4   TSLIFDMDGVIVDSEYIFLSTKTQMLLDRGIDTNEAYQYQFMGT---TFDDMWTTMKKEC 60

Query: 137 ----GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADR 192
                V+   +E   +R          K +      GA++LI    +KG ++AVASS+ +
Sbjct: 61  QLEDSVEALIAEMNHRR------QAMLKRDGVRAIAGAVQLIKHLHAKGYRLAVASSSPK 114

Query: 193 IKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252
             +  NL A GL +  F+ +VS +     KPAPDIFL A++ L+V    C+VIED   G 
Sbjct: 115 ADIIRNLTALGL-LDCFEVLVSGEEVARSKPAPDIFLKAAEWLSVDPKTCLVIEDTKHGS 173

Query: 253 QAAKAAQMRCI 263
           QAAKAAQM CI
Sbjct: 174 QAAKAAQMTCI 184


>gi|220930891|ref|YP_002507799.1| beta-phosphoglucomutase [Halothermothrix orenii H 168]
 gi|219992201|gb|ACL68804.1| beta-phosphoglucomutase [Halothermothrix orenii H 168]
          Length = 216

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 16/223 (7%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           ++   +FD+DGV+ ++ E   R+   +  E G+  T ED     G      L  + + + 
Sbjct: 6   EIKGFIFDLDGVITDTAELHYRSWKKLADEEGIPFTREDNEQLRGVSRRKSLELLLNGRE 65

Query: 138 V---KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           V   K  +    K  +++ ++ +  + +     PGA EL+++ KS+G K+AVAS++   K
Sbjct: 66  VPEEKKLEMMDRKNNYYKEFIKQITEEDL---LPGAKELLDELKSRGYKLAVASASKNAK 122

Query: 195 -VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
            V  NL        +FD I    + E  KPAPD+FL  +K L +   EC+VIEDA AG++
Sbjct: 123 PVIKNLGVE----HVFDQISDGYSVEKTKPAPDLFLYTAKQLGLKPEECVVIEDAEAGIE 178

Query: 254 AAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296
           AA AA M  + +     EER+ +A       ++  ++L+DIL 
Sbjct: 179 AALAAGMTAVGIG---PEERVGKA--HFRYDKVADINLDDILA 216


>gi|359772841|ref|ZP_09276256.1| hypothetical protein GOEFS_073_00540 [Gordonia effusa NBRC 100432]
 gi|359310028|dbj|GAB19034.1| hypothetical protein GOEFS_073_00540 [Gordonia effusa NBRC 100432]
          Length = 567

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 5/142 (3%)

Query: 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV 490
           PEF     WLN +P    + L+GKVV++DFW Y CINC   LP +E   K Y    F V+
Sbjct: 278 PEFAKISQWLNGSPTTIAK-LRGKVVLIDFWAYSCINCQRELPHVEAWWKAYAPFGFHVI 336

Query: 491 GVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA 550
           GVH+ ++  E D   I +   + G++ PV  D D   W      +WP   ++   G +  
Sbjct: 337 GVHTPEYAFEHDTGNIASGAAKLGLTFPVAVDNDYGTWTAYQNVAWPAGYLIDAKGVIRH 396

Query: 551 QLAGEG----HRKDLDDLVEAA 568
              GEG    + K + DL+  A
Sbjct: 397 VSLGEGKYDRNEKYIRDLLTTA 418


>gi|428179226|gb|EKX48098.1| hypothetical protein GUITHDRAFT_69001 [Guillardia theta CCMP2712]
          Length = 334

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 139/295 (47%), Gaps = 21/295 (7%)

Query: 624 RIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALRE 683
           ++ + D +G +I  +    E+GL DG  D A FN P G+   +K+  LY+ D ENH +R+
Sbjct: 16  KVSLIDKEG-WITLLAGCEEDGLEDGVGDQARFNSPVGIV-ESKEGDLYLCDQENHCIRK 73

Query: 684 IDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEH 743
           +    + V TLAGNG +G  Y  G KG    LN P  +C       ++ A +G  +I + 
Sbjct: 74  VTRKGE-VTTLAGNGEEG--YHDG-KGKDARLNIPTGLCMDAQGNIIF-ADSGNQRIRKV 128

Query: 744 STVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK 803
           S  DG     +G   ++      +    F  P+ +++      I+V+D  +  IR ++ +
Sbjct: 129 SP-DGTVTTIAGS--KKGFKDGPAGKALFNYPAYVAVDSK-GSIFVSDFGNHCIRKIDGE 184

Query: 804 TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863
              + +   G         K G  DG G++     P G+   K   +Y+AD  N +I+K+
Sbjct: 185 GMVTTVAGNG---------KMGWADGKGAKARFNSPQGMCIDKEDTVYIADYGNQRIRKM 235

Query: 864 DPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
                 V T+AG G+ GF  G    A+   P  +  +Q+G +++ D  N  +R +
Sbjct: 236 -SKEGEVVTVAGSGEPGFAHGHGQLARFRGPRSVSVSQDGIVYVGDRENFRVRKI 289



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 32/293 (10%)

Query: 591 NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGS 650
            D   F SP+       ++     L++ D  ++ I      G  +  +  +GEEG  DG 
Sbjct: 42  GDQARFNSPVGI-----VESKEGDLYLCDQENHCIRKVTRKGE-VTTLAGNGEEGYHDGK 95

Query: 651 FDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKG 710
             DA  N P GL  +A+ N+++ AD+ N  +R++   + TV T+AG+  KG  ++ G  G
Sbjct: 96  GKDARLNIPTGLCMDAQGNIIF-ADSGNQRIRKVS-PDGTVTTIAGS-KKG--FKDGPAG 150

Query: 711 TSQLLNSPWDVCYKPINEK--VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL 768
            + L N P    Y  ++ K  ++++  G H I +    +G+    +G+G     +G  + 
Sbjct: 151 KA-LFNYP---AYVAVDSKGSIFVSDFGNHCIRKIDG-EGMVTTVAGNGKMGWADGKGA- 204

Query: 769 NTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDR 827
              F  P G+ +  +   +Y+AD  +  IR ++ K G    +AG G+P F          
Sbjct: 205 KARFNSPQGMCIDKEDT-VYIADYGNQRIRKMS-KEGEVVTVAGSGEPGFA--------- 253

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
            G G     + P  V  +++G +YV D  N +++K+      V T AG+GK G
Sbjct: 254 HGHGQLARFRGPRSVSVSQDGIVYVGDRENFRVRKI-SEDGYVWTFAGMGKLG 305



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 846 KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNL 905
           K+G + V +    K+  +D     ++ LAG  + G +DG    A+ + P GI+E++ G+L
Sbjct: 5   KDGGLVVTEG--QKVSLIDK-EGWITLLAGCEEDGLEDGVGDQARFNSPVGIVESKEGDL 61

Query: 906 FIADTNNNIIRYLDLNKEEPEL 927
           ++ D  N+ IR +    E   L
Sbjct: 62  YLCDQENHCIRKVTRKGEVTTL 83


>gi|421503590|ref|ZP_15950537.1| hypothetical protein A471_09914 [Pseudomonas mendocina DLHK]
 gi|400345678|gb|EJO94041.1| hypothetical protein A471_09914 [Pseudomonas mendocina DLHK]
          Length = 123

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 63/106 (59%)

Query: 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAV 510
           ++G+VV+++FWTY CINC+  LP ++   ++Y+D    V+GVH+ ++ +EK    +  AV
Sbjct: 1   MRGRVVLVEFWTYDCINCLRTLPHVQQWYERYRDQGLVVIGVHTPEYAHEKVTANLDEAV 60

Query: 511 LRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG 556
            R GI++PV  D     W   G   WP   ++   G+++ Q  GEG
Sbjct: 61  DRLGITYPVAQDNGYRTWNAFGNRYWPALYLIDQGGRIVYQHFGEG 106


>gi|116619658|ref|YP_821814.1| NHL repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222820|gb|ABJ81529.1| NHL repeat containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 585

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 171/356 (48%), Gaps = 46/356 (12%)

Query: 592 DPRL--FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRD- 648
           DP++  F+SP      LA+D     L+I+DS ++RI +  + G+ I  +  +G  G    
Sbjct: 44  DPKVAQFSSPTG----LALDPKTGNLYIADSANHRIRM--ISGSTISTVAGNGTAGFAGD 97

Query: 649 -GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG- 706
             +   A  N P G+A ++  N  Y+AD+ N  +R++     T+ T+AG+ T+    QG 
Sbjct: 98  KAAATSANLNTPSGVALDSSGNF-YIADSLNSVIRKV--TGGTITTVAGDYTQFPGDQGD 154

Query: 707 GEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD----GYERNL 762
           G +    +LN+P  V   P     YIA +G ++I +  T  G   A+ G     G  RN 
Sbjct: 155 GGQANVAVLNNPTSVMVDPAGNY-YIADSGNNRIRKVDTT-GTINAYLGTLATGGRLRN- 211

Query: 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
                       P  ++L  + +  Y+AD+ ++ I      T  +  +A     F  NL 
Sbjct: 212 ------------PYALALFGNVL--YIADTSNNRIAKYAPYTANN--VAADLTNFAGNLT 255

Query: 823 KFGDRDGMGSEV-LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF 881
                DG  + +  L  P+G+     G +Y+ADS N +I+K+      ++T+AG G +G+
Sbjct: 256 AGFAGDGNTATLSQLNKPVGIAVDSAGNVYIADSNNGRIRKVG-TDGIITTIAGKGGSGY 314

Query: 882 KDGA--ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGV 935
                 A +A LS P GI  A NG ++IADTNN++IR L      P + T+   GV
Sbjct: 315 SGDGGPATSAVLSFPRGIAVAANGTVYIADTNNHVIRAL-----VPTVPTINSGGV 365


>gi|293193523|ref|ZP_06609793.1| protein DipZ [Actinomyces odontolyticus F0309]
 gi|292819879|gb|EFF78881.1| protein DipZ [Actinomyces odontolyticus F0309]
          Length = 442

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 438 DWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           +WLN+       +  G V ++DFW+  C+NC   +P++E + +KYK+    V+GVHS + 
Sbjct: 310 EWLNS-----LGEPHGTVTLVDFWSSSCVNCAREIPEVERIYEKYKEAGLVVIGVHSPQQ 364

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
            +E++   +  A  R GI++PV  D ++  ++  G N+WPT  + GP+G+L
Sbjct: 365 AHEREASVVSGAASRLGITYPVALDPELEAFKAYGANAWPTHYLAGPDGQL 415


>gi|418688943|ref|ZP_13250072.1| putative lipoprotein [Leptospira interrogans str. FPW2026]
 gi|421128059|ref|ZP_15588277.1| putative lipoprotein [Leptospira interrogans serovar Grippotyphosa
           str. 2006006986]
 gi|421134520|ref|ZP_15594655.1| putative lipoprotein [Leptospira interrogans serovar Grippotyphosa
           str. Andaman]
 gi|400361935|gb|EJP17894.1| putative lipoprotein [Leptospira interrogans str. FPW2026]
 gi|410021314|gb|EKO88104.1| putative lipoprotein [Leptospira interrogans serovar Grippotyphosa
           str. Andaman]
 gi|410434526|gb|EKP83664.1| putative lipoprotein [Leptospira interrogans serovar Grippotyphosa
           str. 2006006986]
          Length = 358

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ YV+D  N+ +R+ID  +  V+TL+            
Sbjct: 70  DGTISTASFKTPFGLEVDTSGNI-YVSDQINNLIRKID-PSGNVKTLS------------ 115

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW------EHSTVDGVTRAFSGDGYERN 761
              T+  L  P  + + P+    Y++     QI+      + S   G + AF G      
Sbjct: 116 ---TNLPLQDPSGIKFDPLTGDKYVSCKDSAQIYKIDSTEQFSLFAGSSSAFGG------ 166

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
           L     LN+ F  P  + + P+   +YV +  + +IR +NL +G    L+GG        
Sbjct: 167 LQNGDRLNSLFDSPFFMDIDPE-RNLYVGELSNHTIRKINLNSGTVSTLSGGIS------ 219

Query: 822 FKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
              G  DG  +    + PLG+ Y  K   +  AD  +H+I+K+D  ++ VSTL G G   
Sbjct: 220 ---GYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGA 276

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD--LNKEEPELQTLELKGVQ 936
             DG    A    PA I    +G +F++D N+N IR +D  LN    +   +E+  V+
Sbjct: 277 DVDGNGTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLNVSTIDHTFMEIGTVK 334



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 640 SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
           S G  G  DG    A F  P G+AYN K N L  AD ++H +R+ID  N TV TL GNG 
Sbjct: 215 SGGISGYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGI 274

Query: 700 KGSDYQG 706
            G+D  G
Sbjct: 275 -GADVDG 280



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 30/283 (10%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF 651
           D  + T+  K P  L +D   N +++SD  +N I   D  GN  V+  S+    L+D   
Sbjct: 70  DGTISTASFKTPFGLEVDTSGN-IYVSDQINNLIRKIDPSGN--VKTLSTNLP-LQD--- 122

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
                  P G+ ++      YV+  ++  + +ID   +     AG+ +     Q G++  
Sbjct: 123 -------PSGIKFDPLTGDKYVSCKDSAQIYKID-STEQFSLFAGSSSAFGGLQNGDRLN 174

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771
           S L +SP+ +   P    +Y+     H I + +   G     SG G    L+G  + +  
Sbjct: 175 S-LFDSPFFMDIDP-ERNLYVGELSNHTIRKINLNSGTVSTLSG-GISGYLDGDLA-SAR 230

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG-SRLLAGGDPIFPDNLFKFGDRDGM 830
           F  P GI+ +     +  AD +   IR ++LK    S LL  G            D DG 
Sbjct: 231 FKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIG---------ADVDGN 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
           G+      P  +    +G ++V+D+ +++I+ +DP  N VST+
Sbjct: 282 GTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLN-VSTI 323


>gi|124008176|ref|ZP_01692873.1| hypothetical protein M23134_05970 [Microscilla marina ATCC 23134]
 gi|123986275|gb|EAY26097.1| hypothetical protein M23134_05970 [Microscilla marina ATCC 23134]
          Length = 2548

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 14/273 (5%)

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
           ++ T + P G+  +     LYV+D +NH +++I   + TV  +AG+    S       GT
Sbjct: 619 NETTSDAPAGMVKSPDGVFLYVSDEKNHVIKKIRVSDSTVSIVAGS-VGASGLVNDPVGT 677

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDG--VTRAFSGDGYERNLNGSSSLN 769
           +   N P  +        +Y+A    H I   +  DG       +GDG   +  G+S+ +
Sbjct: 678 NARFNHPSGLAIDDAG-ILYVADKDNHVIRAIANPDGAATVTTVAGDGTSGDAIGAST-S 735

Query: 770 TSFAQPSGISLSPDFM-EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828
             F +PS +++  DF   +YVAD  +  I+ ++L T    +L+G  P     +F  G  D
Sbjct: 736 ARFREPSDVAV--DFSGNLYVADKNNHKIKKVDLNTNTVSILSG--PAV-GTVFPAGATD 790

Query: 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG---IGKAGFKDGA 885
           G  S      P  +   ++G ++VAD +N+ I+++  +S   ST AG      A + DGA
Sbjct: 791 GTASIARFFFPTSIALDRSGNLFVADRHNNLIRQVATSSGATSTYAGDISQTNALYVDGA 850

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           A +A+ + P GI     G++++ADT N +IR +
Sbjct: 851 AASARFNHPTGITVDMVGDVYVADTRNQVIRKI 883



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 144/311 (46%), Gaps = 22/311 (7%)

Query: 615 LFISDS-NHNRIVVTDLDGNFIVQIGSSGEEGL-RDGSFDDATFNRPQGLAYNAKKNLLY 672
           L++SD  NH    +   D    +  GS G  GL  D    +A FN P GLA +    +LY
Sbjct: 638 LYVSDEKNHVIKKIRVSDSTVSIVAGSVGASGLVNDPVGTNARFNHPSGLAID-DAGILY 696

Query: 673 VADTENHALREIDFVND--TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           VAD +NH +R I   +   TV T+AG+GT G D  G    TS     P DV     +  +
Sbjct: 697 VADKDNHVIRAIANPDGAATVTTVAGDGTSG-DAIGAS--TSARFREPSDVAVD-FSGNL 752

Query: 731 YIAMAGQHQI----WEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFME 786
           Y+A    H+I       +TV  ++    G  +       ++    F  P+ I+L      
Sbjct: 753 YVADKNNHKIKKVDLNTNTVSILSGPAVGTVFPAGATDGTASIARFFFPTSIALDRS-GN 811

Query: 787 IYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846
           ++VAD  ++ IR +   +G +   AG D    + L+     DG  +     HP G+    
Sbjct: 812 LFVADRHNNLIRQVATSSGATSTYAG-DISQTNALY----VDGAAASARFNHPTGITVDM 866

Query: 847 NGQIYVADSYNHKIKKLDPASNRVSTLAGIGK-AGFKDGAALAAQLSEPAGIIEAQNGNL 905
            G +YVAD+ N  I+K+  +  +V+T+AGI    G  +G A AA+ + P  +      N+
Sbjct: 867 VGDVYVADTRNQVIRKI--SEGQVTTIAGIANDRGLTNGTAQAAKFNYPGSVYADLEQNI 924

Query: 906 FIADTNNNIIR 916
           ++ D  N ++R
Sbjct: 925 YVGDKVNQLVR 935



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 20/256 (7%)

Query: 757  GYERNLNGSSSLN---TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG 813
            G+  N++ S+S N   T+   P+G+  SPD + +YV+D ++  I+ + +      ++AG 
Sbjct: 605  GFNFNVDQSNSSNGNETTSDAPAGMVKSPDGVFLYVSDEKNHVIKKIRVSDSTVSIVAG- 663

Query: 814  DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL-DP-ASNRVS 871
              +    L      D +G+     HP G+     G +YVAD  NH I+ + +P  +  V+
Sbjct: 664  -SVGASGLV----NDPVGTNARFNHPSGLAIDDAGILYVADKDNHVIRAIANPDGAATVT 718

Query: 872  TLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931
            T+AG G +G   GA+ +A+  EP+ +    +GNL++AD NN+ I+ +DLN     + +  
Sbjct: 719  TVAGDGTSGDAIGASTSARFREPSDVAVDFSGNLYVADKNNHKIKKVDLNTNTVSILSGP 778

Query: 932  LKGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYL---KISLPEEYHFSKEAR 988
              G   P   +     + R   P   +I +D      GN+++     +L  +   S  A 
Sbjct: 779  AVGTVFPAGATDGTASIARFFFP--TSIALD----RSGNLFVADRHNNLIRQVATSSGAT 832

Query: 989  SKFSVDVEPENAVIID 1004
            S ++ D+   NA+ +D
Sbjct: 833  STYAGDISQTNALYVD 848



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 23/280 (8%)

Query: 591 NDPRLFTSPLKFPGKLAIDILNNRLFISD-SNHNRIVVTDLDGNFIVQ-IGSSGEEGLRD 648
           NDP    +    P  LAID     L+++D  NH    + + DG   V  +   G  G   
Sbjct: 672 NDPVGTNARFNHPSGLAIDDAG-ILYVADKDNHVIRAIANPDGAATVTTVAGDGTSGDAI 730

Query: 649 GSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE 708
           G+   A F  P  +A +   NL YVAD  NH ++++D   +TV  L+G         G  
Sbjct: 731 GASTSARFREPSDVAVDFSGNL-YVADKNNHKIKKVDLNTNTVSILSGPAVGTVFPAGAT 789

Query: 709 KGTSQLLNS--PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN---LN 763
            GT+ +     P  +     +  +++A    + I + +T  G T  ++GD  + N   ++
Sbjct: 790 DGTASIARFFFPTSIALDR-SGNLFVADRHNNLIRQVATSSGATSTYAGDISQTNALYVD 848

Query: 764 GSSSLNTSFAQPSGISLSPDFM-EIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLF 822
           G+++ +  F  P+GI++  D + ++YVAD+ +  IR   +  G    +AG   I  D   
Sbjct: 849 GAAA-SARFNHPTGITV--DMVGDVYVADTRNQVIR--KISEGQVTTIAG---IANDR-- 898

Query: 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKK 862
             G  +G        +P  VY      IYV D  N  +++
Sbjct: 899 --GLTNGTAQAAKFNYPGSVYADLEQNIYVGDKVNQLVRR 936


>gi|260589153|ref|ZP_05855066.1| HAD-superfamily hydrolase, subfamily IA, variant 3 family protein
           [Blautia hansenii DSM 20583]
 gi|331082569|ref|ZP_08331694.1| hypothetical protein HMPREF0992_00618 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540573|gb|EEX21142.1| HAD-superfamily hydrolase, subfamily IA, variant 3 family protein
           [Blautia hansenii DSM 20583]
 gi|330400547|gb|EGG80177.1| hypothetical protein HMPREF0992_00618 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 402

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 2/186 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           +  ++FDMDGVL NSE    R   +     G+ +  E + P +G+     +  +    G+
Sbjct: 2   LKGIIFDMDGVLINSEPFHFRVWEETLKRRGIHIEYEIYKPCIGSTIGFLMNLLHEHYGI 61

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
              D E+  K   EI  +   K       P   EL+++    G  +AVASS+    ++A 
Sbjct: 62  SRND-ESLIKEMKEIKEEMLKKQGYPPLIPHVKELLHRLFESGYDMAVASSSPLEYIEAV 120

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
               G+    F  +VS ++ +N KPAPD+F+  ++++ + + EC+V+ED+  G +AAKAA
Sbjct: 121 TGHWGIQ-KYFKQLVSGESVKNPKPAPDVFIKTAELMGMKSKECLVVEDSQNGCKAAKAA 179

Query: 259 QMRCIA 264
            M C+A
Sbjct: 180 DMTCMA 185


>gi|197284899|ref|YP_002150771.1| 2-deoxyglucose-6-phosphatase [Proteus mirabilis HI4320]
 gi|227355301|ref|ZP_03839702.1| phosphatase [Proteus mirabilis ATCC 29906]
 gi|425067859|ref|ZP_18470975.1| HAD hydrolase, family IA [Proteus mirabilis WGLW6]
 gi|425072740|ref|ZP_18475846.1| HAD hydrolase, family IA [Proteus mirabilis WGLW4]
 gi|194682386|emb|CAR42228.1| putative phosphatase [Proteus mirabilis HI4320]
 gi|227164525|gb|EEI49396.1| phosphatase [Proteus mirabilis ATCC 29906]
 gi|404596514|gb|EKA97034.1| HAD hydrolase, family IA [Proteus mirabilis WGLW4]
 gi|404600597|gb|EKB01027.1| HAD hydrolase, family IA [Proteus mirabilis WGLW6]
          Length = 222

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 8/190 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLP-FMGTGEANFLGGVASVKG 137
           + A +FDMDG+L +SE    +A  +VFA++GV++++ D +P  +G      +     V  
Sbjct: 7   IEAAIFDMDGLLIDSEPFWAQAEHEVFAQLGVDLSLADSMPDTVGLRIDQVIELWYQVSP 66

Query: 138 VKGFDSEAAKKRFFE--IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
            +G   + AK+R     + L +  KP      PG    ++ C+S GLK+A+AS++    +
Sbjct: 67  WQGVTQQEAKERMIARVVQLIEDKKP----LLPGVEHALSLCQSLGLKIALASASPHFML 122

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           +  L    +    F A+VSA    + KP P+++L+A+K LNV    C+ +ED+  G+ A 
Sbjct: 123 ERVLELFNIR-HYFSAVVSAADLAHSKPHPEVYLNAAKALNVAPINCVSLEDSRNGMIAC 181

Query: 256 KAAQMRCIAV 265
           KAA+MR I V
Sbjct: 182 KAARMRSIVV 191


>gi|451821951|ref|YP_007458152.1| haloacid dehalogenase superfamily enzyme, subfamily IA [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
 gi|451787930|gb|AGF58898.1| haloacid dehalogenase superfamily enzyme, subfamily IA [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 7/190 (3%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           K+ AVLFDMDGV+ ++E       +++F + G  +T E +   MG G  N +     V G
Sbjct: 3   KIKAVLFDMDGVIFDTERIYLEHWIEIFQKHGYTMTQEVYASVMGRGRENVMKIFKEVYG 62

Query: 138 --VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKV 195
             +   +    K +  +  +++   P      PGA E++   K+   K+A+A+SA R ++
Sbjct: 63  QDLPILEMYKEKDKMLKQAVEEGKVPMK----PGAKEILGFLKNNNFKIALATSAKRDRM 118

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
              L  A +    FDA++  D     KP P+IFL A++ + +    C V+ED+ AG+ AA
Sbjct: 119 IMQLKMANIEAE-FDAVICGDDITKSKPNPEIFLKAAQSIGIAPENCAVVEDSSAGIDAA 177

Query: 256 KAAQMRCIAV 265
             A+M  + V
Sbjct: 178 YKAEMLALHV 187


>gi|329944173|ref|ZP_08292432.1| cytochrome C biogenesis protein transmembrane region [Actinomyces
           sp. oral taxon 170 str. F0386]
 gi|328530903|gb|EGF57759.1| cytochrome C biogenesis protein transmembrane region [Actinomyces
           sp. oral taxon 170 str. F0386]
          Length = 558

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 430 VPEFPAKLDWLNT---APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           +P     + WLNT    PL  ++D  GKV ++DF+ Y CINC   +P +E L + Y    
Sbjct: 263 LPAIDGAVAWLNTPGEQPLA-QKDRAGKVTLIDFFAYSCINCQRSVPGIEKLHQTYARYG 321

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             V+GVHS ++  EK+++ +R  V R GI++PV  D ++  W     + WP   +    G
Sbjct: 322 LQVIGVHSPEYAFEKEVDNVRGGVERLGITYPVAVDSNLTTWTNFNNHYWPAHYLADAQG 381

Query: 547 KLLAQLAGEGHRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDND 592
            +     GEG     +  V   L     K+   +  LP  +  D D
Sbjct: 382 NVRQTHVGEGGEATTEKHVRELL-----KQANPSVSLPAPVFSDAD 422


>gi|167751969|ref|ZP_02424096.1| hypothetical protein ALIPUT_00211 [Alistipes putredinis DSM 17216]
 gi|167660210|gb|EDS04340.1| HAD hydrolase, family IA, variant 3 [Alistipes putredinis DSM
           17216]
          Length = 219

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 24/229 (10%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAE-MGVEVTVEDFLPFMGTGEANFL-----GGV 132
           +  VLFDMDGVL N+ +   +A  ++F E  GVE          G G  + +       +
Sbjct: 2   IRGVLFDMDGVLVNNTQAHVKA-FEIFCERYGVEDWQHKLQTAFGMGNDDIMRLILPEEI 60

Query: 133 ASVKGVKGFDSEAAKKRFFEIYLDKYA---KPNSGIGFPGALELINQCKSKGLKVAVASS 189
              KG+K    E        IY + YA   +P  G+     +EL+ + + +G++ AV SS
Sbjct: 61  IREKGMKALGEEKEA-----IYREVYAPEIRPVRGL-----VELLEELRRRGIRCAVGSS 110

Query: 190 ADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
             R  VD  L+  G+    F  IVS D     KP P+I+L A++ L++P++EC+V EDA 
Sbjct: 111 GCRENVDFVLSNCGI-TDYFSCIVSGDRVTRCKPDPEIYLLAAEGLHLPSAECLVFEDAR 169

Query: 250 AGVQAA-KAAQMRCIAVTTTLSEERL-KEASPSLIRKEIGSVS-LNDIL 295
            G+ AA +A   R +A+ TTL    L  +    ++  +  S++ LN +L
Sbjct: 170 VGITAARRAGAGRIVALATTLPRHTLATQTEADVVIDDFASITDLNTLL 218


>gi|409204160|ref|ZP_11232357.1| putative outer membrane adhesin-like protein [Pseudoalteromonas
           flavipulchra JG1]
          Length = 2380

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 131/277 (47%), Gaps = 23/277 (8%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
             FP  + +D   N ++++DS++N+I      G  +     SG  G  DG+   ATF  P
Sbjct: 615 FNFPKAVTVDASGN-VYVADSSNNKIRKITPAG-VVTTFAGSGSPGSTDGTGTAATFAAP 672

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
            G+  ++  NL +V +T  H +R+I      V T AG  +KGS       GTS   N P+
Sbjct: 673 TGITIDSNGNL-FVVETNPHIVRKITPAG-VVTTFAG--SKGSSGFTDATGTSAKFNFPY 728

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGIS 779
           +      N  ++IA    H I + ++   VT  F+G G   + NG+ +   SF +P  I+
Sbjct: 729 NGGSSS-NNDLFIADRNNHAIRKVTSASVVTT-FAGTGSAGSANGTGT-QASFNKPYDIA 785

Query: 780 L-SPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
           L S D   +YV++    +IR +          AG    F  +    G  DG+ S      
Sbjct: 786 LDSAD--NLYVSEQTGHTIRKI--------TSAGVVTTFAGSAGVSGSTDGLASVARFSQ 835

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
           P G+    NG +YVAD+ NH+I+K+ PA    +TL G
Sbjct: 836 PFGIAVDSNGIVYVADTGNHRIRKISPAE---TTLTG 869



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 106/228 (46%), Gaps = 19/228 (8%)

Query: 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749
           TV TLAG   + S Y  G  GT+    SP+DV     N  VY+A    H I    T +GV
Sbjct: 540 TVSTLAG---QSSGYADG-TGTAASFKSPYDVATDS-NNNVYVADYSNHVI-RKITPEGV 593

Query: 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL 809
               +G G   +  G+ S   SF  P  +++      +YVADS ++ IR +      +  
Sbjct: 594 VTTLAGSGTAGSDEGTGSA-ASFNFPKAVTVDAS-GNVYVADSSNNKIRKITPAGVVTTF 651

Query: 810 LAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR 869
              G P         G  DG G+      P G+    NG ++V ++  H ++K+ PA   
Sbjct: 652 AGSGSP---------GSTDGTGTAATFAAPTGITIDSNGNLFVVETNPHIVRKITPAG-V 701

Query: 870 VSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
           V+T AG  G +GF D    +A+ + P     + N +LFIAD NN+ IR
Sbjct: 702 VTTFAGSKGSSGFTDATGTSAKFNFPYNGGSSSNNDLFIADRNNHAIR 749



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 23/321 (7%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
            K P  +A D  NN ++++D +++ I     +G  +  +  SG  G  +G+   A+FN P
Sbjct: 561 FKSPYDVATD-SNNNVYVADYSNHVIRKITPEG-VVTTLAGSGTAGSDEGTGSAASFNFP 618

Query: 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPW 719
           + +  +A  N+ YVAD+ N+ +R+I      V T AG+G+ GS       GT+    +P 
Sbjct: 619 KAVTVDASGNV-YVADSSNNKIRKITPAG-VVTTFAGSGSPGST---DGTGTAATFAAPT 673

Query: 720 DVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP-SGI 778
            +     N  +++     H I    T  GV   F+G         ++  +  F  P +G 
Sbjct: 674 GITIDS-NGNLFVVETNPH-IVRKITPAGVVTTFAGSKGSSGFTDATGTSAKFNFPYNGG 731

Query: 779 SLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838
           S S +  ++++AD  + +IR +   +  +     G           G  +G G++     
Sbjct: 732 SSSNN--DLFIADRNNHAIRKVTSASVVTTFAGTG---------SAGSANGTGTQASFNK 780

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLSEPAGI 897
           P  +       +YV++   H I+K+  A   V+T AG  G +G  DG A  A+ S+P GI
Sbjct: 781 PYDIALDSADNLYVSEQTGHTIRKITSAG-VVTTFAGSAGVSGSTDGLASVARFSQPFGI 839

Query: 898 IEAQNGNLFIADTNNNIIRYL 918
               NG +++ADT N+ IR +
Sbjct: 840 AVDSNGIVYVADTGNHRIRKI 860



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGL 662
           P  +A+D  +N L++S+   + I      G      GS+G  G  DG    A F++P G+
Sbjct: 781 PYDIALDSADN-LYVSEQTGHTIRKITSAGVVTTFAGSAGVSGSTDGLASVARFSQPFGI 839

Query: 663 AYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704
           A ++   ++YVADT NH +R+I     T+     N   G  Y
Sbjct: 840 AVDSNG-IVYVADTGNHRIRKISPAETTLTGTPSNDDVGDHY 880


>gi|284043300|ref|YP_003393640.1| hypothetical protein Cwoe_1839 [Conexibacter woesei DSM 14684]
 gi|283947521|gb|ADB50265.1| hypothetical protein Cwoe_1839 [Conexibacter woesei DSM 14684]
          Length = 249

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 1/128 (0%)

Query: 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFT 488
           + P FP    W+N A L+  + L G+ V+++FW +C +N +  LP ++   ++Y D    
Sbjct: 10  LAPSFPGMSRWVNVAMLRMDKQL-GRPVLVEFWDFCRVNSLRTLPYMQEWHERYADAGLR 68

Query: 489 VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL 548
           VVG+H+  F+  +D++A++ AV R  IS+PV+ D ++  W   G+  WP+  +     +L
Sbjct: 69  VVGIHTPGFEASRDVDAVKAAVARLEISYPVLIDNELKAWDAYGIEGWPSRYLWNQESRL 128

Query: 549 LAQLAGEG 556
                GEG
Sbjct: 129 FEFHFGEG 136


>gi|219848423|ref|YP_002462856.1| HAD-superfamily hydrolase [Chloroflexus aggregans DSM 9485]
 gi|219542682|gb|ACL24420.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Chloroflexus
           aggregans DSM 9485]
          Length = 227

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 9/201 (4%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A++FD DG++ ++E P+  +  +++AE GV ++V D+   +G   A F      V  V
Sbjct: 3   IRALIFDFDGLMVDTETPALHSWQEIYAEYGVTLSVHDWAVTLG-ANAGFDAHAHLVALV 61

Query: 139 KGFDSEAAKKRFFE---IYLDKYAKPNSGIG----FPGALELINQCKSKGLKVAVASSAD 191
           +  D   A++   E   I   + A+ ++        PG  EL+ +  + GL  AVASS+ 
Sbjct: 62  RERDPLLAEQLIAERDLILARRQARKDALSADQPLLPGVAELLAEAHTAGLPCAVASSSS 121

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           R  V+  L    +    F  IV+AD     KPAPD+FL+A+  L VP + C+V+ED+  G
Sbjct: 122 RRWVEGWLRRLDV-YHAFTTIVTADDVAATKPAPDLFLTAATRLGVPPNACLVLEDSPNG 180

Query: 252 VQAAKAAQMRCIAVTTTLSEE 272
           + AA+AA    +AV   +S +
Sbjct: 181 ILAARAAGCPVVAVPGAVSRQ 201


>gi|332876611|ref|ZP_08444371.1| beta-phosphoglucomutase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332685444|gb|EGJ58281.1| beta-phosphoglucomutase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 361

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 94/186 (50%), Gaps = 7/186 (3%)

Query: 83  LFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFD 142
           +FD+DGVL ++ +    A  ++  E G E+T E      G G    L  + S  G K   
Sbjct: 161 IFDLDGVLVDTAKYHYLAWKEITKEFGFELTPEHNEQLKGIGREVSLHKILSWAG-KSLS 219

Query: 143 SEAAKK---RFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANL 199
            E   +   R  E YL K +  +     PG L L+ Q KSKG K+A+ S++    +   L
Sbjct: 220 EEVFAQTALRKNESYLQKISHIDHKELLPGVLPLLQQLKSKGKKIALGSASRNAHL--VL 277

Query: 200 AAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQ 259
              G+ +  FDAIV        KP P++FL A++ L++    C V+EDA AG+QAAKAA 
Sbjct: 278 ERTGI-LPYFDAIVDGTMVSKAKPDPEVFLKAAEALHLSADRCCVLEDAPAGIQAAKAAG 336

Query: 260 MRCIAV 265
           M  I V
Sbjct: 337 MTAIGV 342


>gi|297568314|ref|YP_003689658.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924229|gb|ADH85039.1| YD repeat protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 2439

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 28/299 (9%)

Query: 632  GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691
            G  I  I  +G  G   G   +A   RP  ++ +     +Y+ADT NH +R +   +  +
Sbjct: 1066 GPIIETIAGTGSWGHSGGLAVNARLYRPSCVSID-PDGTIYIADTGNHRIRSVG-TDGII 1123

Query: 692  RTLAGNGTKG-----SDYQGGEK-GTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHST 745
             T AG+G +      S Y G +    +  LNSP D+   P +  +YIA +  H+I    T
Sbjct: 1124 TTHAGSGFRAGGLGDSGYSGDDGPAVNARLNSPTDIALGP-DGSIYIADSINHRIRRVGT 1182

Query: 746  VDGVTRAFSGDG------YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRA 799
             DG+    +G G         + +G S++     +P  +++ PD   IY+AD+ +  IR 
Sbjct: 1183 -DGIITTVAGTGPTGWWSGGFSGDGGSAVEARLDRPHAVAIGPD-GSIYIADTYNHRIRR 1240

Query: 800  LNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHK 859
            +    G    +AG           F    G   E  L  P+ V    +G IY+AD+YNH+
Sbjct: 1241 VGTD-GIITTIAG------TGYRGFSGDGGPADEARLFGPIAVAIGPDGSIYIADTYNHR 1293

Query: 860  IKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            I+++      ++T+AG G  G+    G A  A  S P+GI    +G+L+IA  N+ I R
Sbjct: 1294 IRRVG-TDGIITTVAGTGSLGYSGDGGPATEASFSTPSGITFGPDGSLYIA-ANHRIRR 1350



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 155/337 (45%), Gaps = 38/337 (11%)

Query: 600  LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRP 659
            L  P  ++ID  +  ++I+D+ ++RI     DG      GS    G R G   D+ ++  
Sbjct: 1090 LYRPSCVSID-PDGTIYIADTGNHRIRSVGTDGIITTHAGS----GFRAGGLGDSGYSGD 1144

Query: 660  QGLAYNAKKNL-----------LYVADTENHALREIDFVNDTVRTLAGNGTKG----SDY 704
             G A NA+ N            +Y+AD+ NH +R +   +  + T+AG G  G       
Sbjct: 1145 DGPAVNARLNSPTDIALGPDGSIYIADSINHRIRRVG-TDGIITTVAGTGPTGWWSGGFS 1203

Query: 705  QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER-NLN 763
              G       L+ P  V   P +  +YIA    H+I    T DG+    +G GY   + +
Sbjct: 1204 GDGGSAVEARLDRPHAVAIGP-DGSIYIADTYNHRIRRVGT-DGIITTIAGTGYRGFSGD 1261

Query: 764  GSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFK 823
            G  +       P  +++ PD   IY+AD+ +  IR +    G    +AG       +L  
Sbjct: 1262 GGPADEARLFGPIAVAIGPD-GSIYIADTYNHRIRRVGTD-GIITTVAG-----TGSLGY 1314

Query: 824  FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
             GD  G  +E     P G+    +G +Y+A   NH+I+++      ++T+AG G  GF  
Sbjct: 1315 SGD-GGPATEASFSTPSGITFGPDGSLYIA--ANHRIRRVG-TDGIITTIAGTGYRGFSG 1370

Query: 884  --GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
              G A  A+L  P G+    +G++++AD+NN+ IR++
Sbjct: 1371 DGGPADEARLG-PRGVSLGPDGSIYVADSNNHRIRHI 1406



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 5/91 (5%)

Query: 826  DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885
            D  G+G   L +H    Y AK+   Y  D        L P    + T+AG G  G   G 
Sbjct: 1030 DISGVGRWSLDRHHF--YSAKDNTTYRGDGTRQSATILGPI---IETIAGTGSWGHSGGL 1084

Query: 886  ALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            A+ A+L  P+ +    +G ++IADT N+ IR
Sbjct: 1085 AVNARLYRPSCVSIDPDGTIYIADTGNHRIR 1115


>gi|312792591|ref|YP_004025514.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179731|gb|ADQ39901.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 223

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 19/222 (8%)

Query: 77  GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVK 136
           GK+ A +FDMDGVL ++ +   +A   +F   G +   ED+           + G   + 
Sbjct: 2   GKIKAAIFDMDGVLTDTVKLHFKAWKKMFENHGYKFEYEDY--------KWKVDGKPRLD 53

Query: 137 GVKGFDSEAAKKRFFEI------YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSA 190
           G+K    +  + +  E+      Y  ++ +  +   F  +  L+N  K   +K+AVASS+
Sbjct: 54  GIKSIAYDVPEDKLIEMAEEKQRYFLEFVEQENLEAFEDSTWLLNHLKQNSIKLAVASSS 113

Query: 191 -DRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
            +  K+   L   G+  +MFD +V+   F+  KP P+IFL+A++ LNV   EC V EDA+
Sbjct: 114 KNTTKI---LTKIGI-YNMFDTVVTGYDFKKGKPDPEIFLTAAQRLNVNPKECAVFEDAI 169

Query: 250 AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSL 291
            GV+A   A M  I V      +RLKEA   + R +  S+ L
Sbjct: 170 DGVKAGIRAGMLTIGVCRDGQFDRLKEAHYVIDRLDKISLEL 211


>gi|451819421|ref|YP_007455622.1| haloacid dehalogenase superfamily, subfamily IA, variant 3 with
           third motif having DD or ED/haloacid dehalogenase
           superfamily, subfamily IA, variant 1 with third motif
           having Dx(3-4)D or Dx(3-4)E [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
 gi|451785400|gb|AGF56368.1| haloacid dehalogenase superfamily, subfamily IA, variant 3 with
           third motif having DD or ED/haloacid dehalogenase
           superfamily, subfamily IA, variant 1 with third motif
           having Dx(3-4)D or Dx(3-4)E [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
          Length = 221

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 70/194 (36%), Positives = 98/194 (50%), Gaps = 15/194 (7%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           K+  ++FDMDGV+ +SE  S +   +VF E   E+  + +L  +G    N+ G    +K 
Sbjct: 3   KIQGIIFDMDGVIIDSERISFKCFQEVFKEYNYEIDEKFYLKVIGR---NYAGIEDIMKK 59

Query: 138 VKGFDSEAAKKRFFEIYLDK------YAKPNSGIGFPGALELINQCKSKGLKVAVASSAD 191
             G D       F  IY  K          +  I  PG  EL++  K  G K+AVA+S  
Sbjct: 60  EYGDDFP-----FETIYRKKADLAYEVTDRDGVIVKPGVHELMDYLKENGYKIAVATSTR 114

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           R +    L  A +   + D +V  D  EN KP P+IFL A+K L V   +CIVIED+ AG
Sbjct: 115 RERALQLLEEAKVKAKV-DFVVCGDEVENSKPNPEIFLKAAKGLGVKAGKCIVIEDSDAG 173

Query: 252 VQAAKAAQMRCIAV 265
           + AA AA+M  I V
Sbjct: 174 ITAAHAAKMIGIHV 187


>gi|434385316|ref|YP_007095927.1| beta-phosphoglucomutase [Chamaesiphon minutus PCC 6605]
 gi|428016306|gb|AFY92400.1| beta-phosphoglucomutase [Chamaesiphon minutus PCC 6605]
          Length = 979

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 3/187 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           +   +FD+DGVL ++ E   RA   +  E G+    +      G      L  +  ++  
Sbjct: 752 IQGFIFDVDGVLTDTAEYHYRAWQRLADEEGLPFDRQANEALRGVSRRESLMHIIGIRQY 811

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
                +A  +R    Y++  A       FPGA+EL+ + +  G+K+A+ S++   +    
Sbjct: 812 SEAQLQAMMERKNRYYVESIATITPQNLFPGAIELLTELRQAGIKIAIGSASKNARTVIE 871

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
               G   ++ DAI   D+ E  KPAPD+FL A++ + +    C+V+EDA  GV+AA AA
Sbjct: 872 KLGIG---NLVDAIADGDSVEAPKPAPDLFLYAAQQIGLEPDRCVVVEDATVGVRAAIAA 928

Query: 259 QMRCIAV 265
            MR I +
Sbjct: 929 GMRSIGI 935


>gi|406874563|gb|EKD24487.1| Thiol-disulfide isomerase [uncultured bacterium]
          Length = 411

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 2/132 (1%)

Query: 439 WLNTAPLQFRRDLKGK-VVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497
           ++NT P     DL GK V+++DFWTY CINC    P L    +KYKD    +VGVH+ +F
Sbjct: 107 FINTNPFMLA-DLAGKKVILIDFWTYSCINCQRTTPYLNAWYEKYKDQGLVIVGVHTPEF 165

Query: 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH 557
             EK  E +  A    GI +PVV D +   W       WP   ++  +G ++    GEG 
Sbjct: 166 GFEKVYENVVKATQNAGIQYPVVQDNEYGTWNAYANRFWPRKYLIDIDGFIIYDHIGEGD 225

Query: 558 RKDLDDLVEAAL 569
               +  ++ AL
Sbjct: 226 YDGTERAIQKAL 237


>gi|290978083|ref|XP_002671766.1| predicted protein [Naegleria gruberi]
 gi|284085337|gb|EFC39022.1| predicted protein [Naegleria gruberi]
          Length = 258

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 21/250 (8%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730
           +++AD  NH +R+++  N  + T+AGNG  G    GG    ++L N P  V    + E+V
Sbjct: 20  IFIADCNNHRIRKLN--NQKIMTVAGNGELGFSSDGGLAINAKL-NYPNGVFV--VKEEV 74

Query: 731 YIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSS--SLNTSFAQPSGISLSPDFMEIY 788
           YIA    H+I + S  +G+    +G+G E    G +  ++N     P+ + +S +  E+Y
Sbjct: 75  YIADYHNHRIRKVSN-NGIIETIAGNG-EGGFEGDNGPAINAKLNYPTSVFVSEN-GEVY 131

Query: 789 VADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG 848
           ++D  ++ +R + L+ G    +AG        L   GD  G+     L  P+ V+   N 
Sbjct: 132 ISDYLNNRVRKV-LQNGNIVTIAGNG-----KLGCSGD-GGLAINAELNCPMNVFVF-NE 183

Query: 849 QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNLF 906
           ++Y+ DS NH+I+K+   S  + T+AG G  GF   DG A  AQL+ P       NG ++
Sbjct: 184 EVYITDSANHRIRKVS-KSGIIETIAGNGNEGFSGDDGLATQAQLNCPMSTFVNSNGEIY 242

Query: 907 IADTNNNIIR 916
           I D+NN  IR
Sbjct: 243 ITDSNNFRIR 252



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 22/256 (8%)

Query: 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLR-DGSFD-DATFNRPQGLAYNAKKN 669
           N+ +FI+D N++RI    L+   I+ +  +GE G   DG    +A  N P G+     K 
Sbjct: 17  NDEIFIADCNNHRI--RKLNNQKIMTVAGNGELGFSSDGGLAINAKLNYPNGVF--VVKE 72

Query: 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729
            +Y+AD  NH +R++   N  + T+AGNG  G +   G    ++L N P  V +   N +
Sbjct: 73  EVYIADYHNHRIRKVS-NNGIIETIAGNGEGGFEGDNGPAINAKL-NYPTSV-FVSENGE 129

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDG-YERNLNGSSSLNTSFAQPSGISLSPDFMEIY 788
           VYI+    +++      +G     +G+G    + +G  ++N     P  + +  +  E+Y
Sbjct: 130 VYISDYLNNRV-RKVLQNGNIVTIAGNGKLGCSGDGGLAINAELNCPMNVFVFNE--EVY 186

Query: 789 VADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
           + DS +  IR ++ K+G    +AG G+  F       GD DG+ ++  L  P+  +   N
Sbjct: 187 ITDSANHRIRKVS-KSGIIETIAGNGNEGFS------GD-DGLATQAQLNCPMSTFVNSN 238

Query: 848 GQIYVADSYNHKIKKL 863
           G+IY+ DS N +I+K+
Sbjct: 239 GEIYITDSNNFRIRKV 254



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 18/194 (9%)

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGD-GYERNLNGSSSLNTSFAQPSGISLSPDFM 785
           N++++IA    H+I + +    +T A +G+ G+  +  G  ++N     P+G+ +  +  
Sbjct: 17  NDEIFIADCNNHRIRKLNNQKIMTVAGNGELGFSSD--GGLAINAKLNYPNGVFVVKE-- 72

Query: 786 EIYVADSESSSIRALNLKTGGSRLLAG-GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844
           E+Y+AD  +  IR ++   G    +AG G+  F       GD +G      L +P  V+ 
Sbjct: 73  EVYIADYHNHRIRKVS-NNGIIETIAGNGEGGFE------GD-NGPAINAKLNYPTSVFV 124

Query: 845 AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQN 902
           ++NG++Y++D  N++++K+    N + T+AG GK G     G A+ A+L+ P  +    N
Sbjct: 125 SENGEVYISDYLNNRVRKVLQNGN-IVTIAGNGKLGCSGDGGLAINAELNCPMNVF-VFN 182

Query: 903 GNLFIADTNNNIIR 916
             ++I D+ N+ IR
Sbjct: 183 EEVYITDSANHRIR 196



 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD--GAALAAQLSEPAG 896
           P  V+ + N +I++AD  NH+I+KL+  + ++ T+AG G+ GF    G A+ A+L+ P G
Sbjct: 9   PTCVFVSSNDEIFIADCNNHRIRKLN--NQKIMTVAGNGELGFSSDGGLAINAKLNYPNG 66

Query: 897 IIEAQNGNLFIADTNNNIIRYLDLN 921
           +   +   ++IAD +N+ IR +  N
Sbjct: 67  VFVVKE-EVYIADYHNHRIRKVSNN 90


>gi|389864089|ref|YP_006366329.1| thioredoxin [Modestobacter marinus]
 gi|388486292|emb|CCH87844.1| Thioredoxin [Modestobacter marinus]
          Length = 304

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 430 VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTV 489
           +P       WLN+ PL     L+GKVV++DFWT  CIN +   P +    + Y+D    V
Sbjct: 10  LPPLDGATAWLNSGPLD-PDGLRGKVVLVDFWTLTCINWLRTEPWVRAWSQAYRDDGLVV 68

Query: 490 VGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL 549
           +GVH+ +F  E DL+ +R AV   GI HPV  D    +W+    + WP   +V  +G + 
Sbjct: 69  IGVHTPEFAFEHDLDLVRRAVQERGIEHPVAVDNGYRVWQAFENHWWPALYLVDTDGVVR 128

Query: 550 AQLAGEGHRKDLDDLVEAAL 569
               GEG  + ++  ++  L
Sbjct: 129 DSQVGEGRYEHVERRLQQLL 148


>gi|340750795|ref|ZP_08687630.1| hypothetical protein FMAG_02477 [Fusobacterium mortiferum ATCC
           9817]
 gi|229421868|gb|EEO36915.1| hypothetical protein FMAG_02477 [Fusobacterium mortiferum ATCC
           9817]
          Length = 216

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 70/199 (35%), Positives = 98/199 (49%), Gaps = 7/199 (3%)

Query: 82  VLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGF 141
           ++FDMDGV+ +SE  +  A  +V  +  + +T+E      G       G ++   GV+  
Sbjct: 6   IIFDMDGVILDSERVANLAWFEVSKKYNLGLTLESLREIKGGTTTRTKGILSERVGVELA 65

Query: 142 DSEAAKKRFFEIYLDKYAKPNSGIGFP-GALELINQCKSKGLKVAVASSADRIKVDANLA 200
           +    +KR  EI LD   K   GI    G +EL+   K K LK AVA+S  R      L 
Sbjct: 66  EKIMKEKR--EIQLD-IIKNEGGIKLKKGVVELLEYIKEKKLKCAVATSTSRESAKKQLK 122

Query: 201 AAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQM 260
             G+    FD +V  D  EN KPAPDIFL A +   +   E  VIED++ G  AA  A +
Sbjct: 123 ETGV-YDYFDTLVFGDEVENGKPAPDIFLKACEKFEINPKEAFVIEDSVLGATAANRAGI 181

Query: 261 RCIAVTTTL--SEERLKEA 277
           +C  V  T+  +EE  K A
Sbjct: 182 KCFVVEDTIKFTEEENKLA 200


>gi|294677362|ref|YP_003577977.1| HAD superfamily hydrolase [Rhodobacter capsulatus SB 1003]
 gi|294476182|gb|ADE85570.1| hydrolase, HAD superfamily [Rhodobacter capsulatus SB 1003]
          Length = 227

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 14/196 (7%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEV--TVEDFLPFMGT--GEANFLGGVA 133
           ++ A++FD+DG L  +EE  R+A  + FA  G++   + ED+   + T  G+        
Sbjct: 2   ELKALIFDVDGTLAETEEVHRQAFNETFAAQGLDWHWSKEDYRTLLRTTGGKERMAKHRE 61

Query: 134 SV-KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADR 192
           +V  G    D  A  +   + Y++  A    G+  PG   LI++ K+ GL++A+A++  R
Sbjct: 62  TVGSGPSDVDIAALHQAKTQRYVEIIASGQVGL-LPGVAALIDRAKASGLRLAIATTTTR 120

Query: 193 IKVDANLAA-----AGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIED 247
             VDA +AA     AG    +F+ I + D     KPAPD++L A + L +P + C+  ED
Sbjct: 121 ANVDALIAATFRRPAG---DIFEVIAAGDEVAQKKPAPDVYLLALQGLGLPPAACLAFED 177

Query: 248 ALAGVQAAKAAQMRCI 263
           + AG+ +AKAA++R +
Sbjct: 178 SRAGLASAKAAELRVV 193


>gi|421117009|ref|ZP_15577380.1| putative lipoprotein [Leptospira interrogans serovar Canicola str.
           Fiocruz LV133]
 gi|410011441|gb|EKO69561.1| putative lipoprotein [Leptospira interrogans serovar Canicola str.
           Fiocruz LV133]
          Length = 358

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ YV+D  N+ +R+ID  +  V+TL+            
Sbjct: 70  DGTISTASFKTPFGLEVDTSGNI-YVSDQINNLIRKID-PSGNVKTLS------------ 115

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW------EHSTVDGVTRAFSGDGYERN 761
              T+  L  P  + + P+    Y++     QI+      + S   G + AF G      
Sbjct: 116 ---TNLPLQDPSGIKFDPLTGDKYVSCKDSAQIYKIDSTEQFSLFAGSSSAFGG------ 166

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
           L     LN+ F  P  + + P+   +YV +  + +IR +NL +G    L+GG        
Sbjct: 167 LQNGDRLNSLFDSPFFMDIDPE-RNLYVGELSNHTIRKINLNSGTVSTLSGGIS------ 219

Query: 822 FKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
              G  DG  +    + PLG+ Y  K   +  AD  +H+I+K+D  ++ VSTL G G   
Sbjct: 220 ---GYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGT 276

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD--LNKEEPELQTLELKGVQ 936
             DG    A    PA I    +G +F++D N+N IR +D  LN    +   +E+  V+
Sbjct: 277 DVDGNGTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLNVSTIDHTFMEIGTVK 334



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 640 SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
           S G  G  DG    A F  P G+AYN K N L  AD ++H +R+ID  N TV TL GNG 
Sbjct: 215 SGGISGYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGI 274

Query: 700 KGSDYQG 706
            G+D  G
Sbjct: 275 -GTDVDG 280



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 30/283 (10%)

Query: 592 DPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSF 651
           D  + T+  K P  L +D   N +++SD  +N I   D  GN  V+  S+    L+D   
Sbjct: 70  DGTISTASFKTPFGLEVDTSGN-IYVSDQINNLIRKIDPSGN--VKTLSTNLP-LQD--- 122

Query: 652 DDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGT 711
                  P G+ ++      YV+  ++  + +ID   +     AG+ +     Q G++  
Sbjct: 123 -------PSGIKFDPLTGDKYVSCKDSAQIYKID-STEQFSLFAGSSSAFGGLQNGDRLN 174

Query: 712 SQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771
           S L +SP+ +   P    +Y+     H I + +   G     SG G    L+G  + +  
Sbjct: 175 S-LFDSPFFMDIDP-ERNLYVGELSNHTIRKINLNSGTVSTLSG-GISGYLDGDLA-SAR 230

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG-SRLLAGGDPIFPDNLFKFGDRDGM 830
           F  P GI+ +     +  AD +   IR ++LK    S LL  G            D DG 
Sbjct: 231 FKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGT---------DVDGN 281

Query: 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
           G+      P  +    +G ++V+D+ +++I+ +DP  N VST+
Sbjct: 282 GTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLN-VSTI 323


>gi|290996889|ref|XP_002681014.1| predicted protein [Naegleria gruberi]
 gi|284094637|gb|EFC48270.1| predicted protein [Naegleria gruberi]
          Length = 1023

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 174/394 (44%), Gaps = 85/394 (21%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRI--VVTD-----LDGNFIVQIGSSGEEGLRDGSFD 652
           + +P  +A+  +   L ISD NHNRI  V+T+     + GN I   G +G+  L      
Sbjct: 152 INYPYGIALTSIE-ELIISDVNHNRIRKVLTNGTIYTIAGNNIQ--GYNGDNKLAT---- 204

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
            A+     G++ +A  N+ Y+ADT+N  +R++   N T+ T+AG G  G    GG   T+
Sbjct: 205 SASLFLSFGVSVDANDNV-YIADTDNDRIRKV-LTNGTIYTIAGIGNSGFSGDGGLA-TA 261

Query: 713 QLLNSPWDVCYKPINE----------------------------------KVYIAMAGQH 738
             ++SP  V   P  E                                   VY A  G H
Sbjct: 262 AKISSPEGVSVSPEGEVYFAGTSYGFLDNTTASLALLGNPGQMFIDKNSGDVYFADKGSH 321

Query: 739 QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIR 798
           +I + S     + A SG       N +SS   + A+P G ++      IY+AD+ ++ +R
Sbjct: 322 RIRKISNGFITSVAGSGSATFCGENIASSA-CALAKPKG-AVIDSLGNIYIADTNNNRVR 379

Query: 799 ALNLKTGGSRLLAG-------GDPIFPD----------------NLFKFG------DRDG 829
            ++   G    +AG       GD I                   N+F  G      + D 
Sbjct: 380 KISYLDGTINTIAGTGSNGYNGDGILATSAQLNRPSSVAMDSVGNVFVAGVGSSGFNGDI 439

Query: 830 MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA- 888
           + ++  L +P+ V    N  +Y+AD+YNH+I+K+    N ++T+ G+G +GF     L+ 
Sbjct: 440 LATDAKLSNPVSVTIDSNDNVYIADTYNHRIRKILQNGN-LTTIVGLGSSGFNGDYLLSN 498

Query: 889 -AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLN 921
             +L+ P  I    NGN++IAD NNN IR +  N
Sbjct: 499 GTKLNYPQSIAFDSNGNMYIADMNNNRIRKMLTN 532



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 210/490 (42%), Gaps = 93/490 (18%)

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGIS-----HPVVNDGDMNLWRELGVN-SWPTFA 540
           +T+ G +   ++ +  L    +  L +G+S     +  + D D +  R++  N +  T A
Sbjct: 186 YTIAGNNIQGYNGDNKLATSASLFLSFGVSVDANDNVYIADTDNDRIRKVLTNGTIYTIA 245

Query: 541 VVGPNG----KLLAQLAGEGHRKDLDDLVEAALLFYGKK-KLLDNTPLPLSLEKDNDPRL 595
            +G +G      LA  A     + +    E  + F G     LDNT   L+L        
Sbjct: 246 GIGNSGFSGDGGLATAAKISSPEGVSVSPEGEVYFAGTSYGFLDNTTASLAL-------- 297

Query: 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGL--RDGSFDD 653
               L  PG++ ID  +  ++ +D   +RI    +   FI  +  SG       + +   
Sbjct: 298 ----LGNPGQMFIDKNSGDVYFADKGSHRI--RKISNGFITSVAGSGSATFCGENIASSA 351

Query: 654 ATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQG-GEKGTS 712
               +P+G   ++  N+ Y+ADT N+ +R+I +++ T+ T+AG G+ G  Y G G   TS
Sbjct: 352 CALAKPKGAVIDSLGNI-YIADTNNNRVRKISYLDGTINTIAGTGSNG--YNGDGILATS 408

Query: 713 QLLNSPWDVCYKPI----------------------------------NEKVYIAMAGQH 738
             LN P  V    +                                  N+ VYIA    H
Sbjct: 409 AQLNRPSSVAMDSVGNVFVAGVGSSGFNGDILATDAKLSNPVSVTIDSNDNVYIADTYNH 468

Query: 739 QI------WEHSTVDGV-TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791
           +I         +T+ G+ +  F+GD    N        T    P  I+   +   +Y+AD
Sbjct: 469 RIRKILQNGNLTTIVGLGSSGFNGDYLLSN-------GTKLNYPQSIAFDSN-GNMYIAD 520

Query: 792 SESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL-LQHPLGVYCAKNGQI 850
             ++ IR +   T G+ +   G  +   N       DG+ + V  L++P G+   +N ++
Sbjct: 521 MNNNRIRKM--LTNGTIITVAGTGVSGYN------GDGILATVAQLKYPQGIA-IENDEL 571

Query: 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAA--QLSEPAGIIEAQNGNLFIA 908
            +ADS NH+I+K+   +  + TL G G  G+     + A  Q++ P+G++  QNG L + 
Sbjct: 572 IIADSSNHRIRKV-LTNGTIITLVGTGTLGYSGDGLVGANSQINNPSGVVVKQNGELIVI 630

Query: 909 DTNNNIIRYL 918
           D++N+ +R +
Sbjct: 631 DSDNSRLRLI 640



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 162/334 (48%), Gaps = 58/334 (17%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGS-----SGEEGLRDGSFDDA 654
           LK P  +A++ +   +FISD+ +NRI     +G  I   GS     SG+ GL      +A
Sbjct: 96  LKNPVSVAVNSIG-EVFISDNGNNRIRKVLTNGTIITFAGSGQTTFSGDYGLA----TNA 150

Query: 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEK-GTSQ 713
             N P G+A  + + L+ ++D  ++ +R++   N T+ T+AGN  +G  Y G  K  TS 
Sbjct: 151 GINYPYGIALTSIEELI-ISDVNHNRIRKV-LTNGTIYTIAGNNIQG--YNGDNKLATSA 206

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS-- 771
            L   + V     N+ VYIA     +I +  T +G     +G G     +G   L T+  
Sbjct: 207 SLFLSFGVSVDA-NDNVYIADTDNDRIRKVLT-NGTIYTIAGIG-NSGFSGDGGLATAAK 263

Query: 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831
            + P G+S+SP+  E+Y                      AG    F DN           
Sbjct: 264 ISSPEGVSVSPE-GEVY---------------------FAGTSYGFLDNT--------TA 293

Query: 832 SEVLLQHPLGVYCAKN-GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGF--KDGAALA 888
           S  LL +P  ++  KN G +Y AD  +H+I+K+  ++  ++++AG G A F  ++ A+ A
Sbjct: 294 SLALLGNPGQMFIDKNSGDVYFADKGSHRIRKI--SNGFITSVAGSGSATFCGENIASSA 351

Query: 889 AQLSEPAGIIEAQNGNLFIADTNNNIIR---YLD 919
             L++P G +    GN++IADTNNN +R   YLD
Sbjct: 352 CALAKPKGAVIDSLGNIYIADTNNNRVRKISYLD 385



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 20/245 (8%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGE-KGTSQLLNSPWDVCYKPINEK 729
           +Y+AD+ NH +R++ + N T+ T+AG G  G  Y G     T   L +P  V    I E 
Sbjct: 54  IYIADSSNHRVRQV-YPNGTITTIAGTGISG--YNGDVIPATRAQLKNPVSVAVNSIGE- 109

Query: 730 VYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL--NTSFAQPSGISLSPDFMEI 787
           V+I+  G ++I +  T +G    F+G G +   +G   L  N     P GI+L+    E+
Sbjct: 110 VFISDNGNNRIRKVLT-NGTIITFAGSG-QTTFSGDYGLATNAGINYPYGIALTS-IEEL 166

Query: 788 YVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN 847
            ++D   + IR + L  G    +AG      +N+  +   + + +   L    GV    N
Sbjct: 167 IISDVNHNRIRKV-LTNGTIYTIAG------NNIQGYNGDNKLATSASLFLSFGVSVDAN 219

Query: 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFK--DGAALAAQLSEPAGIIEAQNGNL 905
             +Y+AD+ N +I+K+   +  + T+AGIG +GF    G A AA++S P G+  +  G +
Sbjct: 220 DNVYIADTDNDRIRKV-LTNGTIYTIAGIGNSGFSGDGGLATAAKISSPEGVSVSPEGEV 278

Query: 906 FIADT 910
           + A T
Sbjct: 279 YFAGT 283



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 136/321 (42%), Gaps = 69/321 (21%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHNRI-VVTDLDG--NFIVQIGSSGEEGLRDGSF-DDAT 655
           L  P    ID L N ++I+D+N+NR+  ++ LDG  N I   GS+G  G  DG     A 
Sbjct: 354 LAKPKGAVIDSLGN-IYIADTNNNRVRKISYLDGTINTIAGTGSNGYNG--DGILATSAQ 410

Query: 656 FNRPQGLAYNAKKNL----------------------------------LYVADTENHAL 681
            NRP  +A ++  N+                                  +Y+ADT NH +
Sbjct: 411 LNRPSSVAMDSVGNVFVAGVGSSGFNGDILATDAKLSNPVSVTIDSNDNVYIADTYNHRI 470

Query: 682 REIDFVNDTVRTLAGNGTKG--SDY--QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ 737
           R+I   N  + T+ G G+ G   DY    G K     LN P  + +   N  +YIA    
Sbjct: 471 RKI-LQNGNLTTIVGLGSSGFNGDYLLSNGTK-----LNYPQSIAFDS-NGNMYIADMNN 523

Query: 738 HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNT--SFAQPSGISLSPDFMEIYVADSESS 795
           ++I +  T +G     +G G     NG   L T      P GI++  D  E+ +ADS + 
Sbjct: 524 NRIRKMLT-NGTIITVAGTGVS-GYNGDGILATVAQLKYPQGIAIEND--ELIIADSSNH 579

Query: 796 SIRALNLKTGGSRLLAGGDPIFPDNLFKFG-DRDGM-GSEVLLQHPLGVYCAKNGQIYVA 853
            IR         ++L  G  I        G   DG+ G+   + +P GV   +NG++ V 
Sbjct: 580 RIR---------KVLTNGTIITLVGTGTLGYSGDGLVGANSQINNPSGVVVKQNGELIVI 630

Query: 854 DSYNHKIKKLDPASNRVSTLA 874
           DS N +++ +        TLA
Sbjct: 631 DSDNSRLRLISTPRQCNGTLA 651



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 4/103 (3%)

Query: 817 FPDNLFKFGDRDG-MGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG 875
           F   +   G  DG + ++  L +P       +G IY+ADS NH+++++ P +  ++T+AG
Sbjct: 20  FVSTIAGGGVCDGYLATQASLAYPGSPTIGPDGSIYIADSSNHRVRQVYP-NGTITTIAG 78

Query: 876 IGKAGFKDGA--ALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
            G +G+      A  AQL  P  +     G +FI+D  NN IR
Sbjct: 79  TGISGYNGDVIPATRAQLKNPVSVAVNSIGEVFISDNGNNRIR 121



 Score = 43.5 bits (101), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 25/155 (16%)

Query: 771 SFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG-------GDPIFPDNLFK 823
           S A P   ++ PD   IY+ADS +  +R +    G    +AG       GD + P     
Sbjct: 39  SLAYPGSPTIGPD-GSIYIADSSNHRVRQV-YPNGTITTIAGTGISGYNGD-VIP----- 90

Query: 824 FGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKD 883
                   +   L++P+ V     G+++++D+ N++I+K+   +  + T AG G+  F  
Sbjct: 91  -------ATRAQLKNPVSVAVNSIGEVFISDNGNNRIRKV-LTNGTIITFAGSGQTTFSG 142

Query: 884 --GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
             G A  A ++ P GI       L I+D N+N IR
Sbjct: 143 DYGLATNAGINYPYGIALTSIEELIISDVNHNRIR 177


>gi|344997218|ref|YP_004799561.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|343965437|gb|AEM74584.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 223

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 19/222 (8%)

Query: 77  GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVK 136
           GK+ A +FDMDGVL ++ +   +A   +F   G +   ED+           + G   + 
Sbjct: 2   GKIKAAIFDMDGVLTDTVKLHFKAWKKMFENHGYKFEYEDY--------KWKVDGKPRLD 53

Query: 137 GVKGFDSEAAKKRFFEIYLDK------YAKPNSGIGFPGALELINQCKSKGLKVAVASSA 190
           G+K    +  + +  E+  +K      Y +  +   F  +  L+N  K   +K+AVASS+
Sbjct: 54  GIKSIAYDVPEDKLIEMAEEKQKIFLEYVEQENLEAFEDSTWLLNHLKQNSIKLAVASSS 113

Query: 191 -DRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
            +  K+   L   G+  +MFD +V+   F+  KP P+IFL+A++ LNV   EC V EDA+
Sbjct: 114 KNTTKI---LTKIGI-YNMFDTVVTGYDFKKGKPDPEIFLTAAQRLNVNPKECAVFEDAI 169

Query: 250 AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSL 291
            GV+A   A M  I V      +RLKEA   + R +  S+ L
Sbjct: 170 DGVKAGIRAGMLTIGVCRDGQFDRLKEAHYVIDRLDKISLEL 211


>gi|225868899|ref|YP_002744847.1| haloacid dehalogenase-like hydrolase [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702175|emb|CAW99885.1| haloacid dehalogenase-like hydrolase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 212

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 97/191 (50%), Gaps = 17/191 (8%)

Query: 80  SAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVK--- 136
           ++++FDMDGV+ +SE         +  + G++        FMGT    F     ++K   
Sbjct: 3   TSLIFDMDGVIVDSEYIFLSTKTQMLLDRGIDTNEAYQYQFMGT---TFDDMWTTMKKEC 59

Query: 137 ----GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADR 192
                V+   +E   +R          K +      GA++LI    +KG ++AVASS+ +
Sbjct: 60  QLEDSVEALIAEMNHRR------QAMLKRDGVKAIAGAVQLIKYLHAKGYRLAVASSSPK 113

Query: 193 IKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252
             +  NL A GL +  F+ +VS +     KPAPDIFL A++ L+V    C+VIED   G 
Sbjct: 114 ADIIRNLTALGL-LDCFEVLVSGEEVARSKPAPDIFLKAAEWLSVDPKTCLVIEDTKHGS 172

Query: 253 QAAKAAQMRCI 263
           QAAKAAQM CI
Sbjct: 173 QAAKAAQMTCI 183


>gi|452955552|gb|EME60950.1| Putative integral membrane C-type cytochrome biogenesis protein
           DipZ [Amycolatopsis decaplanina DSM 44594]
          Length = 582

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)

Query: 431 PEFPAKLDWLNT---APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPF 487
           P+      W NT   AP+   + L+GKVV++DFW Y CINC   +P +   +K Y+D   
Sbjct: 289 PDIKEIQQWFNTPGGAPVDLAQ-LRGKVVLIDFWAYSCINCQRSIPHVTAWDKAYRDAGL 347

Query: 488 TVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGK 547
            V+GVHS ++  EK+   ++ A  ++GI +PV  D +++ W       WP   ++  +G 
Sbjct: 348 QVIGVHSPEYAFEKEPGNVKAAADKFGIGYPVALDNNLSTWTNYRNRFWPAHYLIDADGT 407

Query: 548 LLAQLAGEGHRKDLDDLVEAAL 569
           +     GEG  +  + L+   L
Sbjct: 408 VRHIKFGEGDYQTTEKLIRELL 429


>gi|326389778|ref|ZP_08211343.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter ethanolicus JW 200]
 gi|392939415|ref|ZP_10305059.1| haloacid dehalogenase superfamily enzyme, subfamily IA
           [Thermoanaerobacter siderophilus SR4]
 gi|325994260|gb|EGD52687.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Thermoanaerobacter ethanolicus JW 200]
 gi|392291165|gb|EIV99608.1| haloacid dehalogenase superfamily enzyme, subfamily IA
           [Thermoanaerobacter siderophilus SR4]
          Length = 226

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 10/190 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + A++FDMDGV+ +SE    +   ++F  +GVE++ ++ L F+GT        +      
Sbjct: 2   IKAIIFDMDGVIIDSEPIHIKLEEELFKSLGVEISEDEHLTFVGTSSYYMWRKIK----- 56

Query: 139 KGFDSEAAKKRFFEI----YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK 194
           + F+   + +   E+    YL+   K    I   G  E + +   K  K+AVASS+    
Sbjct: 57  ERFNLSQSVEELVEVDRKRYLEHVLKTGEIIPIEGITETVKKLFEKEYKLAVASSSPIDV 116

Query: 195 VDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254
           ++  +   G+    F+ +VS D  +N KPAPDIFL  +  L V   EC+VIED+  GV  
Sbjct: 117 IELVVKKLGID-KCFEVLVSGDYVKNSKPAPDIFLYTADKLKVKPHECVVIEDSYNGVYG 175

Query: 255 AKAAQMRCIA 264
           AK A M+ I 
Sbjct: 176 AKKAGMKVIG 185


>gi|426402696|ref|YP_007021667.1| hypothetical protein Bdt_0693 [Bdellovibrio bacteriovorus str.
           Tiberius]
 gi|425859364|gb|AFY00400.1| hypothetical protein Bdt_0693 [Bdellovibrio bacteriovorus str.
           Tiberius]
          Length = 692

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 154/328 (46%), Gaps = 30/328 (9%)

Query: 600 LKFPGKLAIDILNNRLFISDSNHN---RIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
             +P  + ID  +N L+++D  ++   ++  + +  NF    GS G+ G  DG+   A F
Sbjct: 276 FSWPIGITIDSSDN-LYVADYGNSAIRKVTSSAVVSNFA---GSYGDYGAVDGTGTAARF 331

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREID---FVNDTVRTLAGNGTKGSDYQGGEKGTSQ 713
             P G+  +A  +L +V D++N ++R+I     V     +LAG+    SD      GT+ 
Sbjct: 332 AGPAGIGIDASGDL-FVTDSDNASIRKITPARVVTLVAGSLAGD----SDGSADGTGTAA 386

Query: 714 LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFA 773
              SP  V   P    +Y+A      I + +    VT      G   + +G+ +    F+
Sbjct: 387 SFFSPEGVAADPAGN-LYVADTMNRTIRKITPSGNVTTIAGSPGQIGSADGTGAA-ARFS 444

Query: 774 QPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833
            P+ ++++ D   IY+AD      R   L  GG      GD    DN    G  DG G+ 
Sbjct: 445 YPTKLTVAED-GNIYIADE----YRIRKLTPGGVVTSLAGDY---DNS---GSADGTGTS 493

Query: 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQLS 892
                  G+     G +YV+DS N+ ++K+  A   V+TLAG +G  G  DG    A  S
Sbjct: 494 ARFGGVAGIASDGAGSLYVSDSGNYTVRKVTLA-GVVTTLAGQVGIQGSDDGTGTGATFS 552

Query: 893 EPAGIIEAQNGNLFIADTNNNIIRYLDL 920
             AGI    +GN+F+ADT+NN+IR + +
Sbjct: 553 RVAGITVTPSGNIFVADTDNNVIRKITV 580



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 167/392 (42%), Gaps = 62/392 (15%)

Query: 536 WPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY-----GKKKLLDNTPLPLSLEKD 590
           +PT   +  +G L      EG+   +  +  AA++       G     D T    S  + 
Sbjct: 114 YPTGITIDGSGNLFVT---EGNNHTIRKITPAAVVTTVAGSPGNAGTADGTG---SAARF 167

Query: 591 NDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGE 643
           N+P   T        LA D      +I+D N+N I       VVT   G+        G 
Sbjct: 168 NNPEDIT--------LAAD---GNFYITDKNNNMIRKMTPAGVVTTFAGD--------GT 208

Query: 644 EGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAG--NGTKG 701
            G  DG+   A FN P G+  ++  NL  V  +    +R+I      V T AG  N T  
Sbjct: 209 YGCTDGTGAAAHFNYPTGIVGDSAGNLFVVC-SSCSTIRKITPAG-VVTTFAGLANATGA 266

Query: 702 SDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN 761
            D      GT+   + P  +     ++ +Y+A  G   I    T   V   F+G   +  
Sbjct: 267 LD----GTGTAARFSWPIGITIDS-SDNLYVADYGNSAI-RKVTSSAVVSNFAGSYGDYG 320

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALN---LKTGGSRLLAGGDPIFP 818
               +     FA P+GI +     +++V DS+++SIR +    + T    L+AG      
Sbjct: 321 AVDGTGTAARFAGPAGIGIDAS-GDLFVTDSDNASIRKITPARVVT----LVAGSLAGDS 375

Query: 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGI-G 877
           D     G  DG G+      P GV     G +YVAD+ N  I+K+ P+ N V+T+AG  G
Sbjct: 376 D-----GSADGTGTAASFFSPEGVAADPAGNLYVADTMNRTIRKITPSGN-VTTIAGSPG 429

Query: 878 KAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909
           + G  DG   AA+ S P  +  A++GN++IAD
Sbjct: 430 QIGSADGTGAAARFSYPTKLTVAEDGNIYIAD 461



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 148/342 (43%), Gaps = 42/342 (12%)

Query: 584 PLSLEKDNDPRLFTSPLKFPGKLAIDILNNRLFISDSNHNRI------VVTDLDGNFIVQ 637
           PLS+ +  +PR            A+      +FI DSN + I      VV+   G F   
Sbjct: 52  PLSIARFREPRD-----------AVVNAAGDIFIVDSNASVIRKISNGVVSTFAGKF--- 97

Query: 638 IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGN 697
               G     DG+ D A F+ P G+  +   NL +V +  NH +R+I      V T+AG+
Sbjct: 98  ----GVFDHADGTGDSARFDYPTGITIDGSGNL-FVTEGNNHTIRKITPAA-VVTTVAGS 151

Query: 698 GTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757
                   G   G++   N+P D+     +   YI     + I +  T  GV   F+GDG
Sbjct: 152 PGNAGTADG--TGSAARFNNPEDITLAA-DGNFYITDKNNNMIRKM-TPAGVVTTFAGDG 207

Query: 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF 817
                +G+ +    F  P+GI +      ++V  S  S+IR +          AG    F
Sbjct: 208 TYGCTDGTGAA-AHFNYPTGI-VGDSAGNLFVVCSSCSTIRKITP--------AGVVTTF 257

Query: 818 PDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-I 876
                  G  DG G+      P+G+    +  +YVAD  N  I+K+  +S  VS  AG  
Sbjct: 258 AGLANATGALDGTGTAARFSWPIGITIDSSDNLYVADYGNSAIRKV-TSSAVVSNFAGSY 316

Query: 877 GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918
           G  G  DG   AA+ + PAGI    +G+LF+ D++N  IR +
Sbjct: 317 GDYGAVDGTGTAARFAGPAGIGIDASGDLFVTDSDNASIRKI 358



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 37/349 (10%)

Query: 601 KFPGKLAIDI-LNNRLFISDSNHNRI-------VVTDLDGNFIVQIGSSGEEGLRDGSFD 652
           +F G   I I  +  LF++DS++  I       VVT + G+      +   +G  DG+  
Sbjct: 330 RFAGPAGIGIDASGDLFVTDSDNASIRKITPARVVTLVAGSL-----AGDSDGSADGTGT 384

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
            A+F  P+G+A +   NL YVADT N  +R+I   +  V T+AG+  +     G   G +
Sbjct: 385 AASFFSPEGVAADPAGNL-YVADTMNRTIRKIT-PSGNVTTIAGSPGQIGSADG--TGAA 440

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772
              + P  +    + E   I +A +++I +  T  GV  + +GD         +  +  F
Sbjct: 441 ARFSYPTKLT---VAEDGNIYIADEYRIRKL-TPGGVVTSLAGDYDNSGSADGTGTSARF 496

Query: 773 AQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
              +GI+ S     +YV+DS + ++R + L  G    LAG        +   G  DG G+
Sbjct: 497 GGVAGIA-SDGAGSLYVSDSGNYTVRKVTLA-GVVTTLAG-------QVGIQGSDDGTGT 547

Query: 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAG-IGKAGFKDGAALAAQL 891
                   G+    +G I+VAD+ N+ I+K+  A   V+T AG  G+ G  DG    A+ 
Sbjct: 548 GATFSRVAGITVTPSGNIFVADTDNNVIRKITVA-GVVTTFAGAAGQGGNDDGMGSNARF 606

Query: 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKGVQPPTP 940
           S+P  +    +GNL++A+     IR     K  P      + GV   +P
Sbjct: 607 SQPHFVATDSSGNLYVAEWGEATIR-----KITPSAVVTTIAGVLSTSP 650


>gi|222528422|ref|YP_002572304.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222455269|gb|ACM59531.1| beta-phosphoglucomutase family hydrolase [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 223

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 19/208 (9%)

Query: 77  GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVK 136
           GK+ A +FDMDGVL ++ +   +A   +F   G +   ED+           + G   + 
Sbjct: 2   GKIKAAIFDMDGVLTDTVKLHFKAWKKMFESHGYKFEYEDY--------KWKVDGKPRID 53

Query: 137 GVKGFDSEAAKKRFFEIYLDK------YAKPNSGIGFPGALELINQCKSKGLKVAVASSA 190
           G++    +  + +  E+  +K      + +  +   F  ++ L+N  K   +K+AVASS+
Sbjct: 54  GIRSIAYDMPEDKLIEMAEEKQKIFLEFVEQENLEAFEDSIWLLNHLKQNDIKLAVASSS 113

Query: 191 -DRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
            +  K+   L   G+  +MFD IV+   F+  KP P+IFL+A++ LNV   EC+V EDA+
Sbjct: 114 KNTTKI---LTKIGI-YNMFDTIVTGYDFKKGKPDPEIFLTAAQRLNVNPKECVVFEDAI 169

Query: 250 AGVQAAKAAQMRCIAVTTTLSEERLKEA 277
            GV+A   A M  I V      +RLKEA
Sbjct: 170 DGVKAGIRAGMLTIGVCRDGQFDRLKEA 197


>gi|308069112|ref|YP_003870717.1| phosphatase/phosphohexomutase [Paenibacillus polymyxa E681]
 gi|305858391|gb|ADM70179.1| Predicted phosphatase/phosphohexomutase [Paenibacillus polymyxa
           E681]
          Length = 250

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 90/185 (48%), Gaps = 2/185 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           V AV+FDMDGVL +SE        + FA  G  +T E+   ++G    +    V     +
Sbjct: 24  VKAVIFDMDGVLVDSEPIYFEIERNSFAHFGASMTEEEHHTYVGVTLESMWRQVLDRHQL 83

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
                EA       +     A     +   G    ++  + KG+ VAVASS+ R  +D  
Sbjct: 84  TNTVEEALSYHRKNVMQTMIAHEGL-VAIDGLERWLDWLQEKGILVAVASSSPRPLIDLI 142

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +   GL    FD  ++ +     KPAPDIFL A++ L +  + CIVIED+  GVQAAK+A
Sbjct: 143 MEKTGLG-RYFDIRITGEEVLQGKPAPDIFLYAAEQLGIAPAHCIVIEDSQNGVQAAKSA 201

Query: 259 QMRCI 263
            M CI
Sbjct: 202 GMHCI 206


>gi|417772389|ref|ZP_12420278.1| putative lipoprotein [Leptospira interrogans serovar Pomona str.
           Pomona]
 gi|418684105|ref|ZP_13245295.1| putative lipoprotein [Leptospira interrogans serovar Pomona str.
           Kennewicki LC82-25]
 gi|400324210|gb|EJO76509.1| putative lipoprotein [Leptospira interrogans serovar Pomona str.
           Kennewicki LC82-25]
 gi|409945760|gb|EKN95775.1| putative lipoprotein [Leptospira interrogans serovar Pomona str.
           Pomona]
 gi|455670390|gb|EMF35375.1| putative lipoprotein [Leptospira interrogans serovar Pomona str.
           Fox 32256]
          Length = 358

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 42/298 (14%)

Query: 648 DGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG 707
           DG+   A+F  P GL  +   N+ YV+D  N+ +R+ID  +  V+TL+            
Sbjct: 70  DGTTSTASFKTPFGLEVDTSGNI-YVSDQINNLIRKID-PSGNVKTLS------------ 115

Query: 708 EKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW------EHSTVDGVTRAFSGDGYERN 761
              T+  L  P  + + P+    Y++    +QI+      + S   G + AF G      
Sbjct: 116 ---TNLPLQDPSGIKFDPLTGDKYVSCKDSNQIYKIDSTEQFSLFAGSSSAFGG------ 166

Query: 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821
           L     LN+ F  P  + + P+   +YV +  + +IR +NL +G    L+GG        
Sbjct: 167 LQNGDRLNSLFDSPFFMDIDPE-RNLYVGELSNHTIRKINLNSGTVSTLSGGIS------ 219

Query: 822 FKFGDRDGMGSEVLLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAG 880
              G  DG  +    + PLG+ Y  K   +  AD  +H+I+K+D  ++ VSTL G G   
Sbjct: 220 ---GYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGT 276

Query: 881 FKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD--LNKEEPELQTLELKGVQ 936
             DG    A    PA I    +G +F++D N+N IR +D  LN    +   +E+  V+
Sbjct: 277 DVDGNGTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLNVSTIDHTFMEIGTVK 334



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 640 SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGT 699
           S G  G  DG    A F  P G+AYN K N L  AD ++H +R+ID  N TV TL GNG 
Sbjct: 215 SGGISGYLDGDLASARFKSPLGIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGI 274

Query: 700 KGSDYQG 706
            G+D  G
Sbjct: 275 -GTDVDG 280



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 30/278 (10%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATF 656
           T+  K P  L +D   N +++SD  +N I   D  GN  V+  S+    L+D        
Sbjct: 75  TASFKTPFGLEVDTSGN-IYVSDQINNLIRKIDPSGN--VKTLSTNLP-LQD-------- 122

Query: 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLN 716
             P G+ ++      YV+  +++ + +ID   +     AG+ +     Q G++  S L +
Sbjct: 123 --PSGIKFDPLTGDKYVSCKDSNQIYKID-STEQFSLFAGSSSAFGGLQNGDRLNS-LFD 178

Query: 717 SPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776
           SP+ +   P    +Y+     H I + +   G     SG G    L+G  + +  F  P 
Sbjct: 179 SPFFMDIDP-ERNLYVGELSNHTIRKINLNSGTVSTLSG-GISGYLDGDLA-SARFKSPL 235

Query: 777 GISLSPDFMEIYVADSESSSIRALNLKTGG-SRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835
           GI+ +     +  AD +   IR ++LK    S LL  G            D DG G+   
Sbjct: 236 GIAYNRKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGT---------DVDGNGTNAS 286

Query: 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873
              P  +    +G ++V+D+ +++I+ +DP  N VST+
Sbjct: 287 FFGPAFISIDNSGYMFVSDANSNRIRIVDPLLN-VSTI 323


>gi|399889371|ref|ZP_10775248.1| HAD-superfamily hydrolase [Clostridium arbusti SL206]
          Length = 221

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 11/190 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDGVL +SE    R    +   +G++ +  D   ++G   +     + S    
Sbjct: 2   LKAVIFDMDGVLIDSEPDHLRIHEKILESLGIQPSSLDHSKYIGVTSSYKWSDIKS---- 57

Query: 139 KGFDSEAAKKRFFEIYLDKY-----AKPNSGIGFPGALELINQCKSKGLKVAVASSADRI 193
             +D + +     +I   KY     +K       PG  +L+    + GLK+AVASSA   
Sbjct: 58  -KYDLDYSVDELVDINRRKYFEYITSKDTIIEAIPGVDKLVRDIYNGGLKLAVASSAPIN 116

Query: 194 KVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
            ++  +   GL    FD +VS D  +  KP PDIFL AS+ L +   +C+V+ED+  G  
Sbjct: 117 VIETVIKYTGLE-KYFDILVSGDYVKRSKPNPDIFLYASEKLQIKPEDCLVVEDSHNGSI 175

Query: 254 AAKAAQMRCI 263
           AAK A+M+C+
Sbjct: 176 AAKKAEMKCL 185


>gi|260881868|ref|ZP_05405417.2| glycoprotease family protein/hydrolase, beta-phosphoglucomutase
           family [Mitsuokella multacida DSM 20544]
 gi|260847762|gb|EEX67769.1| glycoprotease family protein/hydrolase, beta-phosphoglucomutase
           family [Mitsuokella multacida DSM 20544]
          Length = 214

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 6/189 (3%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           K +A +FDMDGV+ +SE    R  +D F    +     D + +MG       G V + +G
Sbjct: 4   KPAAFIFDMDGVIIDSEPIHSRVKMDTFHHFDLPFDEADLIHYMGRTSDEIFGEVIAKEG 63

Query: 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFP--GALELINQCKSKGLKVAVASSADRIKV 195
            K    +   +   E YL+      SG   P  GA+ELI     +G+ +A+A+S+    +
Sbjct: 64  RKDLCVDDLVRYKHEHYLEVL---QSGTIAPIEGAVELIRHLYDEGIPLALATSSWERVM 120

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           D  L A  +    F +++S       KP P I+L +++ L VP  +C+V+ED  AGV AA
Sbjct: 121 DTVLDAFKIR-PYFRSVISGSTLPKSKPDPAIYLLSAERLGVPPKDCLVLEDTAAGVLAA 179

Query: 256 KAAQMRCIA 264
           K A MRCI 
Sbjct: 180 KRAGMRCIG 188


>gi|387131858|ref|YP_006297831.1| HAD hydrolase, family IA, variant 3 [Prevotella intermedia 17]
 gi|386374706|gb|AFJ07831.1| HAD hydrolase, family IA, variant 3 [Prevotella intermedia 17]
          Length = 216

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 19/214 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVF-----AEMGVEVTVEDFLPFMGTGEANFLGGVA 133
           + A LFD+DGV+ N+E         +F     AE G+E+ ++             L  + 
Sbjct: 12  IKACLFDLDGVVFNTEPLYTVFWGGIFKEFYPAEQGLELKIK----------GQTLAQIY 61

Query: 134 SVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRI 193
                +  D +A   R     LD+Y +        G ++ + Q K  G+K A+ +S+++ 
Sbjct: 62  DRYFAEQPDRQAEITR----RLDEYERQMQYTYVDGLIDFVQQLKQNGVKTAIVTSSNKS 117

Query: 194 KVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
           K++           +FDA+ +A+ F   KP+PD +L+A++ L V  ++CIV ED+  G++
Sbjct: 118 KMENVYRQHATFKQLFDAVFTAEDFHESKPSPDGYLTAARALGVEPTDCIVFEDSFNGLR 177

Query: 254 AAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIG 287
           +  AA+ R I ++TT S E +KE +  +I   +G
Sbjct: 178 SGLAAKARVIGLSTTNSVESIKEFTKEVIPNFVG 211


>gi|290997205|ref|XP_002681172.1| predicted protein [Naegleria gruberi]
 gi|284094795|gb|EFC48428.1| predicted protein [Naegleria gruberi]
          Length = 2212

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 123/276 (44%), Gaps = 46/276 (16%)

Query: 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTS 712
           +AT N P GLA + +   LYVADT N  +R ID     + TLAGNG +   Y  G  G+S
Sbjct: 318 NATLNNPTGLAISGR--FLYVADTSNFRIRRIDLDTKIITTLAGNGLR--KYM-GIVGSS 372

Query: 713 QLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT------------RAFSGDGYER 760
             L  P    Y    +++ IA  G  ++   +++   T            RA+S DG   
Sbjct: 373 VALYRPRGTFYNSQTDELLIADWGNSRVIRLNSLSNYTSSKIEPILGTGNRAYSADGNFG 432

Query: 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADS------ESSSIRALNLKTGGSRLLAGGD 814
           N        T    P  +  S    +IYV           S  RA+ +   G+R    GD
Sbjct: 433 N-------ETDVIYPRSVVQSLSNGDIYVGSENLVMKLRKSDQRAVTI--AGTRTTLAGD 483

Query: 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874
                         G+ S+  L  P GV     G IY+ D+ N+ I+K+D ++  +ST  
Sbjct: 484 -----------GYQGIYSQ--LSQPRGVCVGPTGDIYIVDAGNYVIRKID-SNGIISTFI 529

Query: 875 GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT 910
           G G +G++DG AL A++   + I    NG+L I+D+
Sbjct: 530 GDGVSGYRDGDALTARIGFASAITCLSNGDLLISDS 565



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 149/345 (43%), Gaps = 46/345 (13%)

Query: 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDG-SFDDAT 655
           T+ + +P  +A++     ++ +D N  R V  +  G   + + + G   L    S  DA 
Sbjct: 110 TTSIHWPFCVAVN-SKGEVYFTDENTLRKVYKNSYGQDTMLLLAGGGSNLSSNISALDAK 168

Query: 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLL 715
              P GL  +   +++YV+DT  + +R+I  VN T+ T+AG G +  +   G    S  +
Sbjct: 169 LGAPFGLLVDEANDVIYVSDTYKYTIRKI--VNGTIYTIAGTGVEDKNTPEGSLAASASI 226

Query: 716 NSPWDVCYKPIN-EKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ 774
                + + P+  E +Y+   G+                      R +     + T ++ 
Sbjct: 227 AKVLTLTFHPLTRELIYLEETGR---------------------VRRITNEGRIFTLYSG 265

Query: 775 PSG-ISLSPD-FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832
            +G I +  D F + Y+A+S    ++  N      R +   D      +  FG   G+  
Sbjct: 266 TNGAIGMVFDSFGDFYLAESTHQIVKISN----SVRTVVANDA----GVAAFGGDGGLAI 317

Query: 833 EVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891
              L +P G+  A +G+ +YVAD+ N +I+++D  +  ++TLAG G   +      +  L
Sbjct: 318 NATLNNPTGL--AISGRFLYVADTSNFRIRRIDLDTKIITTLAGNGLRKYMGIVGSSVAL 375

Query: 892 SEPAGII-EAQNGNLFIAD-TNNNIIRYLDL-----NKEEPELQT 929
             P G    +Q   L IAD  N+ +IR   L     +K EP L T
Sbjct: 376 YRPRGTFYNSQTDELLIADWGNSRVIRLNSLSNYTSSKIEPILGT 420



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 163/395 (41%), Gaps = 73/395 (18%)

Query: 603  PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGS-SGEEGLRDGSFDDAT-FNRPQ 660
            P  +++  + + ++ SD N   +   D  G     IG   G  G    S+ + T  N P 
Sbjct: 675  PFGISVHPITDEIYFSDMNSFMVRKIDSKGLIKTVIGYIPGCTGFSTTSYANKTCLNFPS 734

Query: 661  GLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGS---DYQGGEKGTSQLLNS 717
             + ++   +L +VA   +H ++++++ +D V  +AG G KG     + G  + TS  LN 
Sbjct: 735  QIIFSPNGDL-FVAVYLDHIIKKMNYGSDVVYNVAGTGAKGVVQPPFSGDLEATSTNLNH 793

Query: 718  PWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG 777
            P+ V + P   ++  +    +++    T  G  +  +G   +  L    ++N        
Sbjct: 794  PFGVAFSPFTNELIFSDTDFYRV-RKVTPFGFVKTIAGGIGDNGL----AVNAYVGFVRA 848

Query: 778  ISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGG--------------------DPIF 817
            ++L+ +  EIY++DS    IR ++  +G     AG                     D   
Sbjct: 849  LALTDN--EIYLSDS-FYRIRKVSFSSGIITTFAGNYNYVEMEDNVPTNYTSLDIYDMKI 905

Query: 818  PDNLFKFGDRDGM------GSEVLLQ----------------------------HPLGVY 843
             +N   F DR  +      G+ +L +                            + +   
Sbjct: 906  RNNELVFSDRCSILKTNISGTGILTRVAGKKECGYVIDSMLLNQTTFSTNTTFGYSISFT 965

Query: 844  CAKNGQIYVADSYNHKIKKLDPASNRVST-LAGIGKAGFK-DGAALAAQLSEPAGIIEAQ 901
               NG++ +AD+ N+ I+K+D   N  ST +AG G AGF  D  A  A L+ P G+    
Sbjct: 966  YMSNGEMLIADTNNNVIRKVDL--NGYSTIIAGNGTAGFNGDSDAKQAYLNNPQGLSVLS 1023

Query: 902  NGNLFIADTNNNIIRYLD-LNKEEPELQTLELKGV 935
            +G +  +D+ N+ IR L    KEE  + T   +G+
Sbjct: 1024 DGRIIFSDSGNDRIRMLSPYCKEEYYILTQSPEGL 1058



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 48/295 (16%)

Query: 671 LYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP----- 725
           +Y+ D  N+ +R+ID  N  + T  G+G  G  Y+ G+  T+++  +    C        
Sbjct: 506 IYIVDAGNYVIRKID-SNGIISTFIGDGVSG--YRDGDALTARIGFASAITCLSNGDLLI 562

Query: 726 ---------------INEKVYIAMAGQHQIWEHSTVDGV-TRAFSGDGYERNLNGSSSLN 769
                           N+++    A  +Q+   +TV G   R++SGDG         ++ 
Sbjct: 563 SDSISDGMLFFGNYLNNQRIRKFTAKTNQV---TTVAGTGVRSYSGDG-------GPAII 612

Query: 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDG 829
                P+G+  +    +I   DSE+  IR ++  TG    +AG        ++ + + DG
Sbjct: 613 APLNGPTGVYYNETNGDIIFCDSENYRIRKISNSTGLITTIAG------TGVYSY-NGDG 665

Query: 830 MGSEVLLQHPLGVYCAK-NGQIYVADSYNHKIKKLDPASNRVSTLAGI--GKAGFKDGA- 885
           + +      P G+       +IY +D  +  ++K+D +   + T+ G   G  GF   + 
Sbjct: 666 LAALATNIAPFGISVHPITDEIYFSDMNSFMVRKID-SKGLIKTVIGYIPGCTGFSTTSY 724

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEP-ELQTLELKG-VQPP 938
           A    L+ P+ II + NG+LF+A   ++II+ ++   +    +     KG VQPP
Sbjct: 725 ANKTCLNFPSQIIFSPNGDLFVAVYLDHIIKKMNYGSDVVYNVAGTGAKGVVQPP 779



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 161/415 (38%), Gaps = 71/415 (17%)

Query: 507 RNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDD--L 564
           + AV   G    +  DG   ++ +L   S P    VGP G +    AG    + +D   +
Sbjct: 468 QRAVTIAGTRTTLAGDGYQGIYSQL---SQPRGVCVGPTGDIYIVDAGNYVIRKIDSNGI 524

Query: 565 VEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNN-RLFISDS--- 620
           +     F G           +S  +D D    T+ + F    AI  L+N  L ISDS   
Sbjct: 525 IST---FIGDG---------VSGYRDGDA--LTARIGFAS--AITCLSNGDLLISDSISD 568

Query: 621 ---------NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDD-----ATFNRPQGLAYNA 666
                    N+ RI       N   Q+ +    G+R  S D      A  N P G+ YN 
Sbjct: 569 GMLFFGNYLNNQRIRKFTAKTN---QVTTVAGTGVRSYSGDGGPAIIAPLNGPTGVYYNE 625

Query: 667 KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI 726
               +   D+EN+ +R+I      + T+AG G    +  G     + +  +P+ +   PI
Sbjct: 626 TNGDIIFCDSENYRIRKISNSTGLITTIAGTGVYSYNGDGLAALATNI--APFGISVHPI 683

Query: 727 NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQ------PSGISL 780
            +++Y +      + +   +D      +  GY     G S+  TS+A       PS I  
Sbjct: 684 TDEIYFSDMNSFMVRK---IDSKGLIKTVIGYIPGCTGFST--TSYANKTCLNFPSQIIF 738

Query: 781 SPDFMEIYVADSESSSIRALNLKTGGSRLLAGG------DPIFPDNLFKFGDRDGMGSEV 834
           SP+  +++VA      I+ +N  +     +AG        P F       GD +   +  
Sbjct: 739 SPN-GDLFVAVYLDHIIKKMNYGSDVVYNVAGTGAKGVVQPPFS------GDLEATSTN- 790

Query: 835 LLQHPLGV-YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA 888
            L HP GV +     ++  +D+  ++++K+ P     +   GIG  G    A + 
Sbjct: 791 -LNHPFGVAFSPFTNELIFSDTDFYRVRKVTPFGFVKTIAGGIGDNGLAVNAYVG 844


>gi|119898927|ref|YP_934140.1| putative CbbY family protein [Azoarcus sp. BH72]
 gi|119671340|emb|CAL95253.1| putative CbbY family protein [Azoarcus sp. BH72]
          Length = 239

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 10/194 (5%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           + AV+FDMDG+L +SE P R A ++V  E+GV +    +   +G    +    +  V G 
Sbjct: 17  LQAVIFDMDGLLLDSERPIRDAWIEVGREIGVSLDAATYHRVIGRNMTDVHAILGEVFGT 76

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFP---GALELINQCKSKGLKVAVASSADRIKV 195
             +   AA  R   +   ++A+     G+P   GA  L+   +++G++  +ASS+ R KV
Sbjct: 77  DIYRDAAA--RVAALLDARHAQQ----GYPPKAGAAALLGWLEARGVRCGLASSSYRDKV 130

Query: 196 DANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAA 255
           +  L  AGL +  FDAI   D     KPAPD++L A++ L    + C+  ED+  G +AA
Sbjct: 131 ERRLRQAGL-LGYFDAIACGDEVTRGKPAPDVYLLAAQRLEAVPTACLAFEDSDNGARAA 189

Query: 256 KAAQMRCIAVTTTL 269
            AA M  + V   L
Sbjct: 190 LAAGMEVVLVPDLL 203


>gi|365828589|ref|ZP_09370388.1| hypothetical protein HMPREF0975_02171 [Actinomyces sp. oral taxon
           849 str. F0330]
 gi|365262940|gb|EHM92808.1| hypothetical protein HMPREF0975_02171 [Actinomyces sp. oral taxon
           849 str. F0330]
          Length = 565

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 4/130 (3%)

Query: 430 VPEFPAKLDWLNT---APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP 486
           +P     + WLNT    PL  ++D  GKV ++DF+ Y CINC   +P +E L + Y    
Sbjct: 270 LPAIEGAVAWLNTPGDQPLT-QKDRTGKVTLVDFFAYSCINCQRSVPGIEKLHQTYAKYG 328

Query: 487 FTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNG 546
             V+GVHS ++  EK+++ +R  V R GI++PV  D ++  W     + WP   +    G
Sbjct: 329 LQVIGVHSPEYAFEKEVDNVRGGVERLGITYPVAVDSNLTTWTNFDNHYWPAHYLADAKG 388

Query: 547 KLLAQLAGEG 556
            +     GEG
Sbjct: 389 NVRQTHVGEG 398


>gi|399527824|ref|ZP_10767508.1| cytochrome C biogenesis protein transmembrane region [Actinomyces
           sp. ICM39]
 gi|398361627|gb|EJN45372.1| cytochrome C biogenesis protein transmembrane region [Actinomyces
           sp. ICM39]
          Length = 446

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD 484
           K   ++P   A  +WLN+          G V ++DFW+  C NC   +P+LE + +KYKD
Sbjct: 302 KDCGVMPTIQAS-EWLNS-----LGQPSGTVTLVDFWSSSCTNCQREIPELEAIYEKYKD 355

Query: 485 MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGP 544
               VVGVHS +   E+D   +  ++ + GI++PV  D D+  ++  G  +WPT  + G 
Sbjct: 356 YGLVVVGVHSPQQAYERDTSVVNASIEKLGITYPVALDPDLEAFKAYGATAWPTHFIAGA 415

Query: 545 NGKLLAQ 551
           +G+L+A 
Sbjct: 416 DGQLVAM 422


>gi|373955434|ref|ZP_09615394.1| NHL repeat containing protein [Mucilaginibacter paludis DSM 18603]
 gi|373892034|gb|EHQ27931.1| NHL repeat containing protein [Mucilaginibacter paludis DSM 18603]
          Length = 459

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 150/312 (48%), Gaps = 28/312 (8%)

Query: 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673
            ++++DS +N ++              +G  G  DG    A F  P+G+A +A+ N+ YV
Sbjct: 175 NMYVADS-YNNVIRKITAAGVTTTYAGTGTLGYLDGPAATAQFYAPKGVAADAQGNI-YV 232

Query: 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIA 733
           AD  N+ +R+I      V TLAG G+ G  Y  G  G   +  SP  +     +  +Y+A
Sbjct: 233 ADMGNNMIRKISAAG-VVTTLAGKGSAG--YADGT-GADAVFKSPAGLAVDA-SGNIYVA 287

Query: 734 MAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793
             G + I + ++  GV    +G      ++ +++ +  F+ PSG+++      +YVAD  
Sbjct: 288 DQGTNTIRKVTSA-GVVTTLAGAAASGQVDATTNTDARFSSPSGVTVDAS-GNVYVADLA 345

Query: 794 SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVA 853
           + +IR   + + G      G+PI                  ++  P G+Y   +G +++ 
Sbjct: 346 NHAIR--KVTSAGVTTTIIGNPILSK---------------VVPSPSGIYVDASGNLFIT 388

Query: 854 DSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912
           D+ + ++ +++  +N + +LAG+ G +GF +G  + A  + P  +     GN+++ D  N
Sbjct: 389 DA-SGQVMEINVTTNIIYSLAGVAGTSGFANGTNINALFNGPQALTLDSQGNIYVVDYYN 447

Query: 913 NIIRYLDLNKEE 924
           N+IR + +  ++
Sbjct: 448 NMIRKIVVTTQQ 459



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 89/221 (40%), Gaps = 22/221 (9%)

Query: 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG 812
           F+G+         + +N  F  P GI        +YVADS ++ IR         ++ A 
Sbjct: 143 FAGNANGGGFVNGTGVNAQFHNPQGICTDAQ-GNMYVADSYNNVIR---------KITAA 192

Query: 813 GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVST 872
           G           G  DG  +      P GV     G IYVAD  N+ I+K+  A+  V+T
Sbjct: 193 GVTTTYAGTGTLGYLDGPAATAQFYAPKGVAADAQGNIYVADMGNNMIRKIS-AAGVVTT 251

Query: 873 LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLEL 932
           LAG G AG+ DG    A    PAG+    +GN+++AD   N IR     K         L
Sbjct: 252 LAGKGSAGYADGTGADAVFKSPAGLAVDASGNIYVADQGTNTIR-----KVTSAGVVTTL 306

Query: 933 KGVQPPTPKSRSPKRLRRRSSPDAQTIVVDGGLSNEGNIYL 973
            G         +     R SSP   T+         GN+Y+
Sbjct: 307 AGAAASGQVDATTNTDARFSSPSGVTV------DASGNVYV 341



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 17/231 (7%)

Query: 687 VNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV 746
           +  TV T AGN   G    G   G +   ++P  +C       +Y+A +  + +    T 
Sbjct: 136 ITATVSTFAGNANGGGFVNG--TGVNAQFHNPQGICTDA-QGNMYVADS-YNNVIRKITA 191

Query: 747 DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806
            GVT  ++G G    L+G ++    F  P G++       IYVAD  ++ IR ++   G 
Sbjct: 192 AGVTTTYAGTGTLGYLDGPAA-TAQFYAPKGVAADAQ-GNIYVADMGNNMIRKISAA-GV 248

Query: 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA 866
              LAG            G  DG G++ + + P G+    +G IYVAD   + I+K+  A
Sbjct: 249 VTTLAGKGSA--------GYADGTGADAVFKSPAGLAVDASGNIYVADQGTNTIRKVTSA 300

Query: 867 SNRVSTLAGIGKAGFKDGAA-LAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916
              V+TLAG   +G  D      A+ S P+G+    +GN+++AD  N+ IR
Sbjct: 301 G-VVTTLAGAAASGQVDATTNTDARFSSPSGVTVDASGNVYVADLANHAIR 350


>gi|29830930|ref|NP_825564.1| hypothetical protein SAV_4387 [Streptomyces avermitilis MA-4680]
 gi|29608043|dbj|BAC72099.1| hypothetical protein SAV_4387 [Streptomyces avermitilis MA-4680]
          Length = 294

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 10/137 (7%)

Query: 738 HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSI 797
           HQ+W +    G     +G   E  ++G       FAQPSG++ + D   +++ADSE+S++
Sbjct: 2   HQLWTYDPAAGTVEVGAGTTNEGLVDGPGE-EAWFAQPSGLAATAD--RLWLADSETSAL 58

Query: 798 RALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYN 857
           R ++L       +  G       LF FG RDG   + LLQHPLGV    +G + V+D+YN
Sbjct: 59  RWVDLDGAVHTAVGTG-------LFDFGHRDGDAEQALLQHPLGVTALPDGSVAVSDTYN 111

Query: 858 HKIKKLDPASNRVSTLA 874
           H +++ DPA+  V+TLA
Sbjct: 112 HALRRYDPATGEVTTLA 128



 Score = 43.1 bits (100), Expect = 0.77,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 636 VQIGS-SGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTL 694
           V++G+ +  EGL DG  ++A F +P GLA  A +  L++AD+E  ALR +D ++  V T 
Sbjct: 14  VEVGAGTTNEGLVDGPGEEAWFAQPSGLAATADR--LWLADSETSALRWVD-LDGAVHTA 70

Query: 695 AGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP 725
            G G     ++ G+     LL  P  V   P
Sbjct: 71  VGTGLFDFGHRDGD-AEQALLQHPLGVTALP 100



 Score = 42.7 bits (99), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSS-GEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671
           +RL+++DS  + +   DLDG     +G+   + G RDG  + A    P G+      ++ 
Sbjct: 46  DRLWLADSETSALRWVDLDGAVHTAVGTGLFDFGHRDGDAEQALLQHPLGVTALPDGSVA 105

Query: 672 YVADTENHALREIDFVNDTVRTLAGNGTKGSD 703
            V+DT NHALR  D     V TLA +  + SD
Sbjct: 106 -VSDTYNHALRRYDPATGEVTTLATDLREPSD 136



 Score = 41.2 bits (95), Expect = 3.0,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 828 DGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIG--KAGFKDGA 885
           DG G E     P G+  A   ++++ADS    ++ +D     V T  G G    G +DG 
Sbjct: 27  DGPGEEAWFAQPSGL-AATADRLWLADSETSALRWVD-LDGAVHTAVGTGLFDFGHRDGD 84

Query: 886 ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919
           A  A L  P G+    +G++ ++DT N+ +R  D
Sbjct: 85  AEQALLQHPLGVTALPDGSVAVSDTYNHALRRYD 118


>gi|336178226|ref|YP_004583601.1| HAD-superfamily hydrolase [Frankia symbiont of Datisca glomerata]
 gi|334859206|gb|AEH09680.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Frankia
           symbiont of Datisca glomerata]
          Length = 266

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 4/224 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           V+AVLFDMDG+L ++E     A  ++ A +G   T E     +G G    L  + S+ GV
Sbjct: 41  VAAVLFDMDGLLVDTEPLWTVAEHELAASLGARFTPEIKAAMIGHGVDTALPLMLSMLGV 100

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
              D  AA +   E   + + +P   +  PGA+ L++   + G+  A+ SS+ R+ +D  
Sbjct: 101 PDADPHAAARFLIERTAELFGEPERIVPMPGAVALLDVLAAAGIATALVSSSFRVLMDPV 160

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           LAA G     F   V+ D     KP P+ +L+A+++L    + C+V+ED+ AG +A   A
Sbjct: 161 LAAVG--ADRFAVTVAGDEVSRRKPHPEPYLTAARLLGADPARCVVLEDSEAGARAGLDA 218

Query: 259 QMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLN--DILTGGGG 300
               I V +  +      A+   +R  +  V+L+  DIL    G
Sbjct: 219 GCPTILVPSIPAVVAPPLAAQVTVRPSLHEVTLDLLDILATQAG 262


>gi|410724051|ref|ZP_11363251.1| haloacid dehalogenase superfamily enzyme, subfamily IA [Clostridium
           sp. Maddingley MBC34-26]
 gi|410602524|gb|EKQ57003.1| haloacid dehalogenase superfamily enzyme, subfamily IA [Clostridium
           sp. Maddingley MBC34-26]
          Length = 213

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 17/193 (8%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVA----- 133
           + AV+FDMDGV+ +SE       +    ++G  ++ E+   ++GT     +  +      
Sbjct: 1   MKAVIFDMDGVIIDSEPIHFEVDMQTLKDLGCNISFEELEKYVGTTNEYMITDLKRKYNI 60

Query: 134 --SVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD 191
             SV  +  +  E  KK+  E  L    KP  GI      EL+   K   + +A+ASS+ 
Sbjct: 61  NQSVDEIIQYKVEMTKKKVIESDL----KPIEGI-----YELLLHLKRNNIPIAIASSSP 111

Query: 192 RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251
           R  ++  ++   +    F+ I+S +   N KPAPDI+  A+K L V    CIVIED+  G
Sbjct: 112 RSFIEVVISKFEIK-DYFNYIISGEEVLNGKPAPDIYFKAAKKLKVSPENCIVIEDSRNG 170

Query: 252 VQAAKAAQMRCIA 264
           V AAKAA M+CI 
Sbjct: 171 VLAAKAAGMKCIG 183


>gi|302143420|emb|CBI21981.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 12/192 (6%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           ++ AV+FD+DG L ++E+ ++    +     G  +  E+    +G G        +++  
Sbjct: 14  RIQAVIFDLDGTLLDTEKFTKSTLKEFLENHGKVLDSENEDKRLGMGPQE-----SAIDV 68

Query: 138 VKGFDSEAAKKRFFE----IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRI 193
           +K +D     ++FF+    IY +K+ K       PGA  LI+     G++ A+AS++   
Sbjct: 69  IKEYDLPLTPQQFFDEIIPIYKEKWPKAKP---LPGANRLISHLHKHGVRFALASNSKTA 125

Query: 194 KVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
            V+  ++        F  I+ +D  ++ KP+PD+FL A+K + V  + C+VIED+L GV+
Sbjct: 126 GVEGKISYHEGWKEQFSVILGSDQVKSGKPSPDLFLEAAKRMVVDAAHCLVIEDSLVGVR 185

Query: 254 AAKAAQMRCIAV 265
           AA AA M+ +AV
Sbjct: 186 AANAAGMKVVAV 197


>gi|127514353|ref|YP_001095550.1| 2-deoxyglucose-6-phosphatase [Shewanella loihica PV-4]
 gi|126639648|gb|ABO25291.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Shewanella
           loihica PV-4]
          Length = 223

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 3/187 (1%)

Query: 79  VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGV 138
           ++AV+FDMDGVL +SE   + A   V +++G+ +++ D     G      +         
Sbjct: 6   LAAVIFDMDGVLIDSEPSWQAAEYKVLSQLGLPISLSDTEQTTGLRIDQVVEYWYRRHPW 65

Query: 139 KGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDAN 198
           KG+D+ A  +        +    + G    G  E +  CK +GLK+ +A+S+  + +DA 
Sbjct: 66  KGYDNAATAEAIVTQVAGEIL--SHGEVMSGVKEALEACKQRGLKLGLATSSPTLLIDAV 123

Query: 199 LAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAA 258
           +    +   +FDAIVSA+A    KP P+++L+ +K L V  S+C+ +ED+  G+ AA+AA
Sbjct: 124 MQKLAIR-ELFDAIVSAEALALGKPHPEVYLNCAKALGVTPSQCLAVEDSFNGLIAARAA 182

Query: 259 QMRCIAV 265
            M  + +
Sbjct: 183 NMHTVVI 189


>gi|406900920|gb|EKD43734.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [uncultured
           bacterium]
          Length = 218

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 21/226 (9%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV---EVTVEDFLPFMGTGEAN-----FL 129
           K+SAV+FDMDGV+ ++    +RA      + G    E+ +++ +     G+ N     +L
Sbjct: 4   KISAVIFDMDGVMVDNNLYHKRAWELFVQQHGFNLPEIELKEHV----YGKINRDILLYL 59

Query: 130 GGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASS 189
            G   +           K+RF++     Y KP  G+     +E +N   S+ + +AVA+S
Sbjct: 60  FG-EDITDADIIKYANEKERFYQSIYSDYIKPTKGL-----IEFLNLLHSQNIPIAVATS 113

Query: 190 ADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL 249
           A    V   L++ G+    F  IV     +  KP P+I+L+ +K LN+  S+C+V ED+L
Sbjct: 114 APPTNVGFVLSSLGVE-KYFQIIVDDTDVKKGKPDPEIYLTTAKKLNMNPSDCVVFEDSL 172

Query: 250 AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDIL 295
           +GVQ+A  A M+ +A+TTT ++  L  A  +L+  +   + +N ++
Sbjct: 173 SGVQSAINAGMKVVAITTTHTKAELSNA--NLVIDDFSKLDINSLI 216


>gi|359485286|ref|XP_002276593.2| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera]
          Length = 359

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 12/192 (6%)

Query: 78  KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG 137
           ++ AV+FD+DG L ++E+ ++    +     G  +  E+    +G G        +++  
Sbjct: 14  RIQAVIFDLDGTLLDTEKFTKSTLKEFLENHGKVLDSENEDKRLGMGPQE-----SAIDV 68

Query: 138 VKGFDSEAAKKRFFE----IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRI 193
           +K +D     ++FF+    IY +K+ K       PGA  LI+     G++ A+AS++   
Sbjct: 69  IKEYDLPLTPQQFFDEIIPIYKEKWPKAKP---LPGANRLISHLHKHGVRFALASNSKTA 125

Query: 194 KVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253
            V+  ++        F  I+ +D  ++ KP+PD+FL A+K + V  + C+VIED+L GV+
Sbjct: 126 GVEGKISYHEGWKEQFSVILGSDQVKSGKPSPDLFLEAAKRMVVDAAHCLVIEDSLVGVR 185

Query: 254 AAKAAQMRCIAV 265
           AA AA M+ +AV
Sbjct: 186 AANAAGMKVVAV 197


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.134    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,658,119,337
Number of Sequences: 23463169
Number of extensions: 798075050
Number of successful extensions: 2124945
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8175
Number of HSP's successfully gapped in prelim test: 9907
Number of HSP's that attempted gapping in prelim test: 2076612
Number of HSP's gapped (non-prelim): 30157
length of query: 1089
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 935
effective length of database: 8,745,867,341
effective search space: 8177385963835
effective search space used: 8177385963835
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)