Query 001380
Match_columns 1089
No_of_seqs 938 out of 5678
Neff 8.7
Searched_HMMs 29240
Date Tue Mar 26 01:07:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001380.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001380hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 100.0 2.7E-30 9.1E-35 301.7 31.1 278 597-923 135-476 (496)
2 4hw6_A Hypothetical protein, I 100.0 5.4E-29 1.8E-33 292.3 31.4 272 597-921 135-432 (433)
3 3tc9_A Hypothetical hydrolase; 100.0 1.3E-28 4.3E-33 289.2 32.3 271 597-921 133-429 (430)
4 3hrp_A Uncharacterized protein 100.0 8.8E-28 3E-32 280.7 35.7 277 598-921 128-409 (409)
5 3kbb_A Phosphorylated carbohyd 99.9 7.8E-27 2.7E-31 247.7 22.8 206 79-289 1-208 (216)
6 4g9b_A Beta-PGM, beta-phosphog 99.9 5.2E-27 1.8E-31 254.2 20.0 212 75-296 1-216 (243)
7 3fvz_A Peptidyl-glycine alpha- 99.9 5.6E-26 1.9E-30 257.9 28.3 274 598-923 21-323 (329)
8 2ah5_A COG0546: predicted phos 99.9 5.4E-26 1.8E-30 240.3 20.3 201 78-289 3-205 (210)
9 4gib_A Beta-phosphoglucomutase 99.9 1.1E-25 3.7E-30 244.9 20.3 214 77-298 24-241 (250)
10 4ex6_A ALNB; modified rossman 99.9 1.8E-25 6.1E-30 240.6 21.5 217 74-296 14-233 (237)
11 2hi0_A Putative phosphoglycola 99.9 2.7E-25 9.3E-30 240.1 19.9 208 78-289 3-233 (240)
12 3qxg_A Inorganic pyrophosphata 99.9 7.4E-25 2.5E-29 237.0 22.1 217 74-296 19-239 (243)
13 3kya_A Putative phosphatase; s 99.9 4.6E-24 1.6E-28 249.1 29.0 259 642-935 118-420 (496)
14 3mc1_A Predicted phosphatase, 99.9 6.3E-25 2.2E-29 234.3 19.0 212 78-299 3-218 (226)
15 3s6j_A Hydrolase, haloacid deh 99.9 1.8E-24 6.2E-29 231.7 22.3 217 77-298 4-222 (233)
16 3dv9_A Beta-phosphoglucomutase 99.9 2.8E-24 9.5E-29 232.6 22.3 215 77-297 21-239 (247)
17 2pib_A Phosphorylated carbohyd 99.9 3.2E-24 1.1E-28 226.3 22.3 211 79-296 1-213 (216)
18 3sd7_A Putative phosphatase; s 99.9 2.8E-24 9.7E-29 231.8 20.4 206 78-289 28-235 (240)
19 1q7f_A NHL, brain tumor CG1071 99.9 1.3E-22 4.4E-27 224.7 34.2 253 597-923 26-281 (286)
20 3l5k_A Protein GS1, haloacid d 99.9 3.7E-24 1.3E-28 232.5 21.0 209 75-289 26-239 (250)
21 2nyv_A Pgpase, PGP, phosphogly 99.9 2.5E-24 8.6E-29 229.6 18.4 209 78-298 2-211 (222)
22 3hrp_A Uncharacterized protein 99.9 1E-22 3.5E-27 237.7 33.1 260 625-933 99-363 (409)
23 2hsz_A Novel predicted phospha 99.9 8.1E-24 2.8E-28 229.0 21.8 211 75-289 19-238 (243)
24 3s94_A LRP-6, low-density lipo 99.9 1.1E-22 3.9E-27 248.5 34.5 283 597-939 80-438 (619)
25 3iru_A Phoshonoacetaldehyde hy 99.9 9E-24 3.1E-28 232.8 22.1 218 76-298 11-267 (277)
26 3e58_A Putative beta-phosphogl 99.9 3.9E-24 1.3E-28 225.3 17.9 207 78-289 4-210 (214)
27 3nas_A Beta-PGM, beta-phosphog 99.9 4.3E-24 1.5E-28 229.1 18.2 212 79-298 2-217 (233)
28 1ijq_A LDL receptor, low-densi 99.9 2.8E-22 9.6E-27 225.8 33.4 227 598-901 27-259 (316)
29 4hw6_A Hypothetical protein, I 99.9 4.6E-23 1.6E-27 241.8 27.7 238 641-934 122-383 (433)
30 1npe_A Nidogen, entactin; glyc 99.9 1.6E-22 5.5E-27 222.0 30.4 228 599-904 34-263 (267)
31 3v64_C Agrin; beta propeller, 99.9 2.8E-22 9.5E-27 228.9 33.2 237 612-931 44-283 (349)
32 3v64_C Agrin; beta propeller, 99.9 1.5E-22 5.1E-27 231.1 30.9 225 598-901 70-296 (349)
33 3v65_B Low-density lipoprotein 99.9 1.2E-22 4.1E-27 235.3 30.4 226 597-901 112-339 (386)
34 4eek_A Beta-phosphoglucomutase 99.9 7.6E-24 2.6E-28 231.4 19.2 214 77-298 26-247 (259)
35 3v65_B Low-density lipoprotein 99.9 2.7E-22 9.1E-27 232.4 32.6 237 612-931 87-326 (386)
36 1rwi_B Serine/threonine-protei 99.9 7.7E-23 2.6E-27 224.1 26.1 240 602-923 25-265 (270)
37 1npe_A Nidogen, entactin; glyc 99.9 4.8E-22 1.6E-26 218.2 32.2 242 613-931 2-246 (267)
38 3s94_A LRP-6, low-density lipo 99.9 4.6E-22 1.6E-26 243.2 34.6 210 595-869 34-245 (619)
39 2hdo_A Phosphoglycolate phosph 99.9 1.1E-23 3.9E-28 221.9 16.3 201 78-289 3-204 (209)
40 1ijq_A LDL receptor, low-densi 99.9 1.2E-21 4E-26 220.7 33.6 238 614-931 3-246 (316)
41 3tc9_A Hypothetical hydrolase; 99.9 2.5E-22 8.4E-27 235.7 28.2 237 641-934 120-380 (430)
42 3ed5_A YFNB; APC60080, bacillu 99.9 1.8E-22 6.2E-27 216.8 23.8 212 74-297 2-232 (238)
43 3p5b_L Low density lipoprotein 99.9 7.6E-22 2.6E-26 229.4 30.8 227 598-901 109-341 (400)
44 3qnm_A Haloacid dehalogenase-l 99.9 4.9E-23 1.7E-27 221.4 18.6 210 77-297 3-234 (240)
45 1te2_A Putative phosphatase; s 99.9 1.8E-22 6E-27 214.7 22.4 210 78-290 8-218 (226)
46 3sov_A LRP-6, low-density lipo 99.9 9.9E-22 3.4E-26 220.8 29.4 224 598-901 32-259 (318)
47 3p5b_L Low density lipoprotein 99.9 2.3E-21 7.9E-26 225.4 32.9 240 612-931 83-328 (400)
48 4a0p_A LRP6, LRP-6, low-densit 99.9 4.2E-21 1.4E-25 234.8 36.5 286 597-939 76-435 (628)
49 2hcf_A Hydrolase, haloacid deh 99.9 8.5E-23 2.9E-27 218.9 19.0 215 78-297 3-227 (234)
50 3m0c_C LDL receptor, low-densi 99.9 1.9E-21 6.6E-26 242.2 32.9 227 598-901 421-653 (791)
51 3lor_A Thiol-disulfide isomera 99.9 5.6E-23 1.9E-27 206.9 15.1 143 426-571 5-156 (160)
52 2wf7_A Beta-PGM, beta-phosphog 99.9 3.1E-22 1E-26 212.4 21.1 211 79-298 2-216 (221)
53 3eyt_A Uncharacterized protein 99.9 9.4E-23 3.2E-27 204.9 15.8 144 426-571 2-153 (158)
54 2fp8_A Strictosidine synthase; 99.9 3.3E-21 1.1E-25 217.8 29.3 262 597-923 15-314 (322)
55 2hoq_A Putative HAD-hydrolase 99.9 3E-22 1E-26 216.2 19.6 212 78-297 1-226 (241)
56 3m0c_C LDL receptor, low-densi 99.9 9.6E-21 3.3E-25 235.9 35.9 247 612-939 395-647 (791)
57 3kzx_A HAD-superfamily hydrola 99.9 1.7E-22 5.7E-27 216.5 17.3 203 76-296 22-226 (231)
58 3k1z_A Haloacid dehalogenase-l 99.9 1.5E-22 5.1E-27 221.8 17.2 213 79-298 1-238 (263)
59 4g2e_A Peroxiredoxin; redox pr 99.9 3.3E-23 1.1E-27 207.8 11.0 123 424-555 4-138 (157)
60 3sov_A LRP-6, low-density lipo 99.9 5.2E-21 1.8E-25 215.0 29.7 237 612-931 4-246 (318)
61 3d6j_A Putative haloacid dehal 99.9 7.2E-22 2.4E-26 209.9 20.5 212 78-296 5-218 (225)
62 3fw2_A Thiol-disulfide oxidore 99.9 3.4E-22 1.2E-26 199.0 16.8 138 423-571 4-149 (150)
63 1swv_A Phosphonoacetaldehyde h 99.9 4.2E-22 1.4E-26 218.5 19.1 215 77-297 4-258 (267)
64 4a0p_A LRP6, LRP-6, low-densit 99.9 6.6E-21 2.3E-25 233.1 31.1 210 598-874 34-245 (628)
65 2om6_A Probable phosphoserine 99.9 5.3E-22 1.8E-26 212.6 18.2 210 78-298 3-232 (235)
66 1q7f_A NHL, brain tumor CG1071 99.9 1.1E-20 3.9E-25 209.0 29.5 240 623-931 4-245 (286)
67 2gfh_A Haloacid dehalogenase-l 99.9 4.3E-22 1.5E-26 217.7 17.5 212 77-296 16-250 (260)
68 4fo5_A Thioredoxin-like protei 99.9 2.3E-22 8E-27 198.4 13.2 133 422-566 5-141 (143)
69 2fdr_A Conserved hypothetical 99.9 1.2E-21 4E-26 209.2 19.2 209 78-296 3-220 (229)
70 2b5x_A YKUV protein, TRXY; thi 99.9 4.5E-22 1.5E-26 197.1 14.8 145 425-571 2-146 (148)
71 3ewl_A Uncharacterized conserv 99.9 2.2E-22 7.6E-27 198.2 12.3 133 425-568 2-139 (142)
72 3eur_A Uncharacterized protein 99.9 2.7E-22 9.1E-27 197.7 12.4 133 423-566 4-141 (142)
73 2go7_A Hydrolase, haloacid deh 99.9 1.1E-21 3.7E-26 205.2 17.6 201 78-295 3-204 (207)
74 2f9s_A Thiol-disulfide oxidore 99.9 3.5E-22 1.2E-26 199.0 13.1 140 426-573 2-141 (151)
75 4gqc_A Thiol peroxidase, perox 99.9 1.2E-22 4.1E-27 205.1 9.5 138 424-570 5-160 (164)
76 3umc_A Haloacid dehalogenase; 99.9 7.6E-22 2.6E-26 214.4 16.4 213 76-296 19-251 (254)
77 3umg_A Haloacid dehalogenase; 99.9 1.6E-21 5.4E-26 211.5 18.8 214 77-297 13-248 (254)
78 3drn_A Peroxiredoxin, bacterio 99.9 7.2E-22 2.5E-26 199.2 14.8 133 424-565 2-141 (161)
79 1yns_A E-1 enzyme; hydrolase f 99.9 3.4E-22 1.2E-26 218.4 13.3 124 164-290 129-256 (261)
80 3smv_A S-(-)-azetidine-2-carbo 99.9 5.3E-22 1.8E-26 213.1 14.0 205 77-296 4-235 (240)
81 2qlt_A (DL)-glycerol-3-phospha 99.9 1.7E-21 5.9E-26 214.9 18.2 204 77-290 33-245 (275)
82 2lrn_A Thiol:disulfide interch 99.9 1.4E-21 4.7E-26 195.1 15.5 138 424-572 3-143 (152)
83 2hyx_A Protein DIPZ; thioredox 99.9 1.4E-21 4.8E-26 220.0 16.9 150 423-573 50-202 (352)
84 3fvz_A Peptidyl-glycine alpha- 99.9 1.1E-20 3.7E-25 214.3 24.4 230 598-867 88-322 (329)
85 2qc5_A Streptogramin B lactona 99.9 2.5E-19 8.5E-24 198.8 34.6 245 598-923 17-261 (300)
86 3umb_A Dehalogenase-like hydro 99.9 5.5E-22 1.9E-26 212.5 12.1 131 165-298 99-229 (233)
87 3hcz_A Possible thiol-disulfid 99.9 1.7E-21 5.8E-26 193.0 14.5 137 423-570 4-143 (148)
88 3gkn_A Bacterioferritin comigr 99.9 1.4E-21 4.9E-26 197.4 14.1 138 422-566 5-155 (163)
89 3u5r_E Uncharacterized protein 99.9 3.3E-21 1.1E-25 204.5 17.5 145 423-570 31-187 (218)
90 3or5_A Thiol:disulfide interch 99.9 3.8E-21 1.3E-25 194.5 16.5 143 423-574 7-155 (165)
91 3um9_A Haloacid dehalogenase, 99.9 3.6E-21 1.2E-25 205.6 17.3 132 164-298 95-226 (230)
92 3ddh_A Putative haloacid dehal 99.9 6.7E-21 2.3E-25 203.5 19.2 201 79-289 8-229 (234)
93 3fkf_A Thiol-disulfide oxidore 99.9 2.7E-21 9.3E-26 191.5 14.7 137 423-570 4-146 (148)
94 2i3y_A Epididymal secretory gl 99.9 3.1E-21 1.1E-25 202.7 15.7 145 423-571 28-212 (215)
95 3lwa_A Secreted thiol-disulfid 99.9 2.3E-21 7.9E-26 200.0 14.5 140 424-571 31-182 (183)
96 3kh7_A Thiol:disulfide interch 99.9 2.7E-21 9.1E-26 198.0 14.8 141 421-573 27-170 (176)
97 2l5o_A Putative thioredoxin; s 99.9 4E-21 1.4E-25 191.7 15.7 143 425-574 3-145 (153)
98 3u26_A PF00702 domain protein; 99.9 2.1E-21 7.3E-26 207.9 14.5 129 165-298 100-229 (234)
99 2f8a_A Glutathione peroxidase 99.9 2.1E-21 7.3E-26 203.9 13.7 143 425-570 21-207 (208)
100 2v1m_A Glutathione peroxidase; 99.9 2.5E-21 8.5E-26 196.7 13.7 144 424-570 5-167 (169)
101 2no4_A (S)-2-haloacid dehaloge 99.8 7E-21 2.4E-25 205.2 17.0 128 165-296 105-233 (240)
102 3erw_A Sporulation thiol-disul 99.8 4.8E-21 1.6E-25 189.0 14.4 137 423-565 8-144 (145)
103 3gl3_A Putative thiol:disulfid 99.8 6.6E-21 2.2E-25 189.9 15.2 138 424-570 3-142 (152)
104 3kcm_A Thioredoxin family prot 99.8 7.5E-21 2.6E-25 189.9 15.5 140 425-571 3-144 (154)
105 3raz_A Thioredoxin-related pro 99.8 4.8E-21 1.7E-25 190.8 14.0 134 429-572 4-142 (151)
106 2p31_A CL683, glutathione pero 99.8 1.1E-21 3.8E-26 201.9 9.5 144 423-569 22-180 (181)
107 3m9l_A Hydrolase, haloacid deh 99.8 3.3E-21 1.1E-25 202.5 13.3 193 77-298 4-198 (205)
108 2qc5_A Streptogramin B lactona 99.8 1.1E-18 3.7E-23 193.6 34.4 240 599-921 60-299 (300)
109 2z2n_A Virginiamycin B lyase; 99.8 1.2E-18 4.3E-23 193.0 34.8 245 597-922 11-255 (299)
110 2vup_A Glutathione peroxidase- 99.8 3.3E-21 1.1E-25 200.0 12.9 146 423-571 21-186 (190)
111 2p5q_A Glutathione peroxidase 99.8 3.5E-21 1.2E-25 195.8 12.7 144 424-570 6-168 (170)
112 2p4o_A Hypothetical protein; p 99.8 3.5E-19 1.2E-23 199.6 30.2 239 601-912 32-279 (306)
113 3kij_A Probable glutathione pe 99.8 4.6E-21 1.6E-25 197.1 13.6 149 422-573 10-173 (180)
114 2pke_A Haloacid delahogenase-l 99.8 2E-20 6.7E-25 203.2 19.2 207 78-297 12-242 (251)
115 2gs3_A PHGPX, GPX-4, phospholi 99.8 3E-21 1E-25 199.4 11.9 143 423-568 22-184 (185)
116 2cvb_A Probable thiol-disulfid 99.8 1.3E-20 4.3E-25 195.3 16.5 145 423-571 6-160 (188)
117 2r37_A Glutathione peroxidase 99.8 6.5E-21 2.2E-25 199.5 14.4 147 425-575 12-198 (207)
118 3vay_A HAD-superfamily hydrola 99.8 5.4E-21 1.8E-25 204.3 13.9 206 78-296 1-227 (230)
119 3dwv_A Glutathione peroxidase- 99.8 1.5E-21 5E-26 202.1 8.7 145 423-570 19-183 (187)
120 2lja_A Putative thiol-disulfid 99.8 1.2E-20 4E-25 188.1 14.9 141 424-572 3-145 (152)
121 1zrn_A L-2-haloacid dehalogena 99.8 1.9E-20 6.5E-25 200.5 17.6 124 165-289 95-218 (232)
122 3ixr_A Bacterioferritin comigr 99.8 7.9E-21 2.7E-25 195.0 13.9 135 423-566 20-171 (179)
123 3cmi_A Peroxiredoxin HYR1; thi 99.8 3.4E-21 1.2E-25 196.3 11.0 141 426-570 8-168 (171)
124 3nuq_A Protein SSM1, putative 99.8 2.9E-20 9.8E-25 205.8 19.5 210 77-296 55-279 (282)
125 2g80_A Protein UTR4; YEL038W, 99.8 2.8E-20 9.4E-25 201.4 18.8 203 77-289 29-253 (253)
126 2ywi_A Hypothetical conserved 99.8 8.4E-21 2.9E-25 198.0 13.8 147 423-571 17-175 (196)
127 2ggt_A SCO1 protein homolog, m 99.8 9.9E-21 3.4E-25 191.2 13.9 139 429-572 2-163 (164)
128 2oda_A Hypothetical protein ps 99.8 8.2E-21 2.8E-25 197.6 13.2 124 165-296 36-184 (196)
129 1xvw_A Hypothetical protein RV 99.8 1.5E-20 5.2E-25 189.2 14.7 134 424-566 9-153 (160)
130 4evm_A Thioredoxin family prot 99.8 1.9E-20 6.5E-25 182.5 14.8 135 429-567 1-136 (138)
131 2lrt_A Uncharacterized protein 99.8 1.1E-20 3.8E-25 188.5 13.3 137 423-572 8-147 (152)
132 1jfu_A Thiol:disulfide interch 99.8 1.5E-20 5.1E-25 194.3 14.4 142 423-571 33-181 (186)
133 2c0d_A Thioredoxin peroxidase 99.8 1.1E-20 3.8E-25 200.0 13.3 143 421-570 22-184 (221)
134 2w43_A Hypothetical 2-haloalka 99.8 3.2E-21 1.1E-25 201.9 9.0 124 165-295 74-197 (201)
135 1n8j_A AHPC, alkyl hydroperoxi 99.8 1.3E-20 4.3E-25 194.7 13.2 138 425-571 2-157 (186)
136 2obi_A PHGPX, GPX-4, phospholi 99.8 5.3E-21 1.8E-25 197.2 10.0 142 423-567 20-181 (183)
137 1n7d_A LDL receptor, low-densi 99.8 1.7E-20 5.8E-25 233.0 15.9 233 597-901 402-635 (699)
138 1zzo_A RV1677; thioredoxin fol 99.8 3E-20 1E-24 180.9 14.0 133 427-570 2-135 (136)
139 2rli_A SCO2 protein homolog, m 99.8 4.6E-20 1.6E-24 187.7 15.9 139 431-574 7-168 (171)
140 1xzo_A BSSCO, hypothetical pro 99.8 1.5E-20 5.3E-25 191.9 12.1 143 422-569 5-171 (174)
141 1we0_A Alkyl hydroperoxide red 99.8 4E-20 1.4E-24 191.3 14.9 138 425-571 2-158 (187)
142 1lu4_A Soluble secreted antige 99.8 3.3E-20 1.1E-24 180.8 13.4 131 428-569 2-135 (136)
143 3ztl_A Thioredoxin peroxidase; 99.8 1.6E-20 5.3E-25 199.7 11.9 130 422-558 38-182 (222)
144 2bmx_A Alkyl hydroperoxidase C 99.8 4E-20 1.4E-24 192.7 14.8 138 423-569 3-169 (195)
145 2pn8_A Peroxiredoxin-4; thiore 99.8 2.4E-20 8.4E-25 196.3 13.3 141 423-570 18-177 (211)
146 2a4v_A Peroxiredoxin DOT5; yea 99.8 2.4E-20 8.3E-25 187.5 12.4 137 423-570 6-151 (159)
147 3ha9_A Uncharacterized thiored 99.8 1.2E-20 4.1E-25 191.0 10.0 138 424-569 11-163 (165)
148 1qq5_A Protein (L-2-haloacid d 99.8 2.2E-19 7.4E-24 195.3 20.7 129 165-298 93-244 (253)
149 2fi1_A Hydrolase, haloacid deh 99.8 8.5E-20 2.9E-24 188.8 16.5 177 78-269 5-182 (190)
150 3ia1_A THIO-disulfide isomeras 99.8 1.1E-20 3.8E-25 188.7 9.3 138 423-570 4-144 (154)
151 3cnh_A Hydrolase family protei 99.8 3.3E-20 1.1E-24 193.8 13.3 185 78-276 3-196 (200)
152 2b1k_A Thiol:disulfide interch 99.8 4E-20 1.4E-24 187.7 13.4 144 420-573 18-163 (168)
153 1psq_A Probable thiol peroxida 99.8 5.4E-20 1.8E-24 185.8 14.2 122 423-555 15-145 (163)
154 1tp9_A Peroxiredoxin, PRX D (t 99.8 1.4E-20 4.7E-25 189.9 9.6 125 423-555 3-146 (162)
155 3ib6_A Uncharacterized protein 99.8 2.2E-20 7.6E-25 193.6 11.3 131 165-298 34-177 (189)
156 1n7d_A LDL receptor, low-densi 99.8 1.1E-19 3.8E-24 225.7 19.6 233 612-923 377-615 (699)
157 2h30_A Thioredoxin, peptide me 99.8 1.4E-20 4.9E-25 190.0 9.4 134 437-571 23-157 (164)
158 2z2n_A Virginiamycin B lyase; 99.8 1.3E-17 4.5E-22 184.7 34.1 241 600-923 56-296 (299)
159 2zg6_A Putative uncharacterize 99.8 4.9E-21 1.7E-25 203.7 6.0 196 78-289 2-210 (220)
160 2qe8_A Uncharacterized protein 99.8 2.2E-18 7.7E-23 196.4 28.2 270 601-919 17-318 (343)
161 1q98_A Thiol peroxidase, TPX; 99.8 3.6E-20 1.2E-24 187.5 11.6 133 423-566 16-162 (165)
162 1zof_A Alkyl hydroperoxide-red 99.8 4.3E-20 1.5E-24 193.0 12.5 137 425-570 2-161 (198)
163 1kng_A Thiol:disulfide interch 99.8 6.9E-20 2.3E-24 183.3 13.4 139 423-572 7-154 (156)
164 1uul_A Tryparedoxin peroxidase 99.8 9.1E-20 3.1E-24 191.1 14.7 141 423-570 5-165 (202)
165 2i81_A 2-Cys peroxiredoxin; st 99.8 4.8E-20 1.7E-24 194.4 12.4 139 423-570 20-180 (213)
166 3qpm_A Peroxiredoxin; oxidored 99.8 5.7E-20 1.9E-24 197.2 13.1 139 422-567 46-203 (240)
167 4dcc_A Putative haloacid dehal 99.8 6.4E-20 2.2E-24 196.2 13.1 179 77-270 26-221 (229)
168 3e5z_A Putative gluconolactona 99.8 1.6E-17 5.6E-22 184.7 32.9 246 594-923 21-287 (296)
169 3mng_A Peroxiredoxin-5, mitoch 99.8 4.4E-20 1.5E-24 187.2 11.0 136 422-566 13-171 (173)
170 3p7x_A Probable thiol peroxida 99.8 5.4E-20 1.9E-24 186.4 11.6 121 423-555 19-148 (166)
171 2yzh_A Probable thiol peroxida 99.8 9.5E-20 3.2E-24 185.6 13.4 133 423-567 20-169 (171)
172 3dsm_A Uncharacterized protein 99.8 1.3E-17 4.4E-22 188.8 32.1 248 601-931 44-309 (328)
173 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 4.5E-20 1.5E-24 186.6 10.4 124 424-556 3-143 (167)
174 2h01_A 2-Cys peroxiredoxin; th 99.8 8E-20 2.7E-24 189.9 12.3 137 425-570 1-159 (192)
175 3zrd_A Thiol peroxidase; oxido 99.8 9.1E-20 3.1E-24 190.3 12.6 134 423-567 51-198 (200)
176 1zye_A Thioredoxin-dependent p 99.8 1.2E-19 4.1E-24 192.5 13.6 141 423-570 26-185 (220)
177 3hdc_A Thioredoxin family prot 99.8 1E-19 3.5E-24 182.7 12.0 126 423-559 14-139 (158)
178 2i6x_A Hydrolase, haloacid deh 99.8 1.1E-19 3.8E-24 191.5 12.7 177 78-269 4-197 (211)
179 3uma_A Hypothetical peroxiredo 99.8 5.8E-20 2E-24 188.3 10.0 134 423-566 25-182 (184)
180 1qmv_A Human thioredoxin perox 99.8 1.6E-19 5.5E-24 188.4 13.6 139 423-570 4-163 (197)
181 3tjj_A Peroxiredoxin-4; thiore 99.8 8.8E-20 3E-24 196.8 11.9 140 421-567 59-217 (254)
182 2p11_A Hypothetical protein; p 99.8 5.4E-20 1.8E-24 197.2 9.8 201 77-296 9-223 (231)
183 1rwi_B Serine/threonine-protei 99.8 2.1E-18 7E-23 188.7 22.3 201 655-923 21-223 (270)
184 1xvq_A Thiol peroxidase; thior 99.8 1.2E-19 4E-24 185.6 11.3 137 423-571 17-166 (175)
185 3g4e_A Regucalcin; six bladed 99.8 1.6E-17 5.3E-22 185.3 29.3 240 596-912 8-263 (297)
186 2k6v_A Putative cytochrome C o 99.8 4.4E-20 1.5E-24 188.1 7.8 137 425-568 11-171 (172)
187 2ls5_A Uncharacterized protein 99.7 4.4E-21 1.5E-25 192.9 0.0 139 424-571 7-149 (159)
188 3l8h_A Putative haloacid dehal 99.8 2.8E-19 9.7E-24 183.5 13.4 122 165-289 27-171 (179)
189 2jsy_A Probable thiol peroxida 99.8 8E-20 2.7E-24 185.3 8.9 136 423-569 17-166 (167)
190 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 1.4E-17 4.6E-22 186.4 27.7 256 596-923 13-300 (314)
191 3m1y_A Phosphoserine phosphata 99.8 2.6E-19 8.9E-24 189.4 11.8 188 77-286 2-200 (217)
192 2b7k_A SCO1 protein; metalloch 99.8 3.5E-19 1.2E-23 186.2 12.0 147 422-573 11-182 (200)
193 2gmw_A D,D-heptose 1,7-bisphos 99.8 8.8E-19 3E-23 184.9 14.2 127 165-296 50-204 (211)
194 2pwj_A Mitochondrial peroxired 99.8 3.9E-19 1.3E-23 180.6 10.6 135 424-566 7-169 (171)
195 3me7_A Putative uncharacterize 99.8 7.7E-19 2.6E-23 178.5 12.8 140 425-570 2-162 (170)
196 1prx_A HORF6; peroxiredoxin, h 99.8 1.6E-18 5.4E-23 183.8 14.1 137 424-570 5-169 (224)
197 2v2g_A Peroxiredoxin 6; oxidor 99.8 9.2E-19 3.2E-23 186.1 12.2 137 424-570 3-165 (233)
198 2fp8_A Strictosidine synthase; 99.8 2.6E-17 9E-22 185.7 24.9 225 655-931 17-276 (322)
199 1nnl_A L-3-phosphoserine phosp 99.8 5.3E-19 1.8E-23 188.5 10.1 192 77-289 12-219 (225)
200 1xcc_A 1-Cys peroxiredoxin; un 99.8 1.4E-18 4.7E-23 183.8 13.2 142 424-572 3-168 (220)
201 2b0c_A Putative phosphatase; a 99.8 2.5E-19 8.4E-24 187.9 7.3 179 77-269 5-195 (206)
202 3dr2_A Exported gluconolactona 99.8 1.5E-16 5E-21 178.0 29.7 244 594-920 38-304 (305)
203 3vgz_A Uncharacterized protein 99.8 2.1E-15 7E-20 171.3 38.9 254 601-923 41-304 (353)
204 3keb_A Probable thiol peroxida 99.8 3.5E-18 1.2E-22 178.2 14.4 135 423-571 21-177 (224)
205 1i5g_A Tryparedoxin II; electr 99.8 8.8E-19 3E-23 172.8 9.3 120 425-552 2-126 (144)
206 2c4n_A Protein NAGD; nucleotid 99.8 7E-20 2.4E-24 197.8 1.4 204 78-289 2-247 (250)
207 1nm3_A Protein HI0572; hybrid, 99.8 1.8E-18 6.1E-23 186.6 11.8 134 424-567 3-161 (241)
208 4hde_A SCO1/SENC family lipopr 99.7 4.8E-18 1.6E-22 172.5 13.1 141 424-569 6-169 (170)
209 2dg1_A DRP35, lactonase; beta 99.7 4.7E-16 1.6E-20 175.8 31.0 256 598-921 42-315 (333)
210 3sbc_A Peroxiredoxin TSA1; alp 99.7 3.6E-18 1.2E-22 176.6 11.9 148 423-578 22-188 (216)
211 4eze_A Haloacid dehalogenase-l 99.7 2.2E-18 7.4E-23 192.9 11.0 173 76-264 105-287 (317)
212 1yv9_A Hydrolase, haloacid deh 99.7 3.2E-19 1.1E-23 195.3 2.5 208 77-289 3-254 (264)
213 3a2v_A Probable peroxiredoxin; 99.7 6.9E-18 2.4E-22 180.3 12.4 141 424-570 5-162 (249)
214 2ism_A Putative oxidoreductase 99.7 1.5E-16 5.1E-21 181.5 24.3 270 595-912 25-335 (352)
215 3a9g_A Putative uncharacterize 99.7 4.8E-16 1.6E-20 177.2 28.4 274 595-923 23-353 (354)
216 2p4o_A Hypothetical protein; p 99.7 2.4E-16 8.1E-21 176.5 25.2 204 657-923 32-243 (306)
217 1o8x_A Tryparedoxin, TRYX, TXN 99.7 1.9E-18 6.3E-23 171.0 7.1 120 425-553 3-127 (146)
218 3s9f_A Tryparedoxin; thioredox 99.7 7.1E-19 2.4E-23 177.9 3.8 122 423-553 21-147 (165)
219 3vgz_A Uncharacterized protein 99.7 5.1E-15 1.7E-19 168.0 35.7 240 602-911 90-334 (353)
220 3hfq_A Uncharacterized protein 99.7 1.8E-15 6.2E-20 172.0 32.0 279 600-931 39-326 (347)
221 3tue_A Tryparedoxin peroxidase 99.7 1.4E-17 4.9E-22 172.5 12.9 138 423-567 25-182 (219)
222 1o73_A Tryparedoxin; electron 99.7 6E-18 2E-22 166.7 8.9 119 425-552 3-126 (144)
223 2ho4_A Haloacid dehalogenase-l 99.7 9.2E-19 3.1E-23 190.9 2.4 208 76-289 4-250 (259)
224 1rku_A Homoserine kinase; phos 99.7 1.4E-17 4.6E-22 174.9 11.0 185 79-296 2-197 (206)
225 2pr7_A Haloacid dehalogenase/e 99.7 5.4E-18 1.9E-22 165.2 7.3 103 166-269 19-121 (137)
226 2fea_A 2-hydroxy-3-keto-5-meth 99.7 1.3E-17 4.5E-22 179.2 10.4 194 77-297 4-217 (236)
227 3i28_A Epoxide hydrolase 2; ar 99.7 1.2E-17 4.1E-22 202.5 11.3 104 165-269 100-207 (555)
228 3e5z_A Putative gluconolactona 99.7 2.6E-15 8.8E-20 166.9 29.2 206 656-931 27-253 (296)
229 3p96_A Phosphoserine phosphata 99.7 1.2E-17 4.1E-22 195.2 10.1 196 77-296 183-391 (415)
230 3dsm_A Uncharacterized protein 99.7 2.8E-15 9.6E-20 169.5 28.2 210 600-874 83-309 (328)
231 2o2x_A Hypothetical protein; s 99.7 1.1E-17 3.8E-22 177.5 7.6 128 165-297 56-211 (218)
232 2lus_A Thioredoxion; CR-Trp16, 99.5 1.5E-18 5E-23 170.8 0.0 117 429-553 3-126 (143)
233 3kd3_A Phosphoserine phosphohy 99.7 7.9E-18 2.7E-22 177.7 5.6 124 165-289 82-214 (219)
234 4eo3_A Bacterioferritin comigr 99.7 1.1E-16 3.8E-21 178.6 15.1 130 428-570 2-139 (322)
235 3u4y_A Uncharacterized protein 99.7 8.6E-15 3E-19 164.9 30.6 238 607-923 4-253 (331)
236 2ghs_A AGR_C_1268P; regucalcin 99.7 2.3E-14 7.9E-19 161.9 33.0 235 598-913 46-294 (326)
237 2wm8_A MDP-1, magnesium-depend 99.7 2.3E-17 8E-22 170.5 7.6 107 164-276 67-174 (187)
238 3u4y_A Uncharacterized protein 99.7 2E-14 6.7E-19 161.9 32.1 253 600-923 40-305 (331)
239 1l7m_A Phosphoserine phosphata 99.7 1.2E-16 4.3E-21 167.6 12.7 190 78-289 4-206 (211)
240 1qyi_A ZR25, hypothetical prot 99.7 1.6E-17 5.4E-22 188.8 4.7 202 86-298 137-376 (384)
241 3g4e_A Regucalcin; six bladed 99.7 1.4E-14 4.8E-19 161.3 28.0 209 656-931 12-237 (297)
242 2qe8_A Uncharacterized protein 99.7 5.1E-15 1.7E-19 168.5 24.3 275 535-863 17-317 (343)
243 2g8s_A Glucose/sorbosone dehyd 99.7 5E-15 1.7E-19 168.9 24.0 283 595-920 12-352 (353)
244 2hx1_A Predicted sugar phospha 99.7 6.3E-18 2.2E-22 187.2 -1.3 119 169-289 149-283 (284)
245 3fvv_A Uncharacterized protein 99.6 1.5E-15 5.3E-20 162.3 17.2 179 77-264 2-203 (232)
246 1zjj_A Hypothetical protein PH 99.6 3.1E-17 1.1E-21 179.4 3.4 121 164-289 129-256 (263)
247 2fpr_A Histidine biosynthesis 99.6 2.5E-16 8.4E-21 160.9 9.5 102 165-269 42-163 (176)
248 3dr2_A Exported gluconolactona 99.6 2.5E-14 8.6E-19 159.8 26.3 208 656-931 44-274 (305)
249 1l0q_A Surface layer protein; 99.6 3.2E-13 1.1E-17 155.8 36.1 246 602-931 33-283 (391)
250 4f82_A Thioredoxin reductase; 99.6 4.1E-16 1.4E-20 156.3 9.8 125 423-555 9-158 (176)
251 3scy_A Hypothetical bacterial 99.6 1.5E-13 5E-18 157.2 32.3 268 599-922 48-337 (361)
252 1q92_A 5(3)-deoxyribonucleotid 99.6 1.9E-17 6.5E-22 172.7 -0.9 182 78-297 3-193 (197)
253 2i7d_A 5'(3')-deoxyribonucleot 99.6 1.3E-17 4.6E-22 173.2 -2.2 180 79-295 2-189 (193)
254 3no2_A Uncharacterized protein 99.6 1.5E-13 5.1E-18 151.1 29.8 238 612-923 4-254 (276)
255 2oyc_A PLP phosphatase, pyrido 99.6 3.4E-17 1.2E-21 183.3 0.3 130 164-297 155-298 (306)
256 1vjr_A 4-nitrophenylphosphatas 99.6 7.7E-17 2.6E-21 177.0 2.9 122 165-289 137-266 (271)
257 3n28_A Phosphoserine phosphata 99.6 6.7E-16 2.3E-20 175.1 9.3 191 76-289 104-305 (335)
258 3das_A Putative oxidoreductase 99.6 1.2E-13 4E-18 154.8 26.4 265 594-912 25-328 (347)
259 2dg1_A DRP35, lactonase; beta 99.6 8E-14 2.7E-18 157.4 25.4 213 657-931 45-270 (333)
260 1ri6_A Putative isomerase YBHE 99.6 8.3E-13 2.8E-17 148.7 32.6 258 601-921 38-307 (343)
261 2b82_A APHA, class B acid phos 99.6 3.1E-16 1.1E-20 164.9 3.4 98 165-269 88-188 (211)
262 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-13 3.6E-18 154.6 24.1 208 656-922 17-256 (314)
263 2iwa_A Glutamine cyclotransfer 99.6 3.9E-13 1.3E-17 144.8 26.6 210 658-923 22-238 (266)
264 4ap9_A Phosphoserine phosphata 99.6 5.5E-16 1.9E-20 161.3 3.8 119 165-297 79-198 (201)
265 1l0q_A Surface layer protein; 99.6 2.4E-12 8.4E-17 148.4 34.9 235 613-931 2-241 (391)
266 3c75_H MADH, methylamine dehyd 99.6 4.7E-13 1.6E-17 154.7 28.4 265 612-930 84-409 (426)
267 2xhf_A Peroxiredoxin 5; oxidor 99.6 7.8E-15 2.7E-19 147.0 11.6 123 423-556 13-153 (171)
268 2p9j_A Hypothetical protein AQ 99.6 1E-15 3.5E-20 154.1 5.2 117 166-296 37-154 (162)
269 3epr_A Hydrolase, haloacid deh 99.6 1.5E-15 5.1E-20 166.1 6.5 81 209-289 169-253 (264)
270 2x4d_A HLHPP, phospholysine ph 99.6 4.1E-16 1.4E-20 170.6 1.3 210 76-295 9-265 (271)
271 3bws_A Protein LP49; two-domai 99.6 3.2E-12 1.1E-16 149.6 34.4 238 602-922 171-432 (433)
272 2l57_A Uncharacterized protein 99.6 8.3E-15 2.8E-19 140.6 10.1 113 429-570 5-117 (126)
273 3a1c_A Probable copper-exporti 99.6 1.6E-15 5.4E-20 168.0 5.6 199 77-297 30-278 (287)
274 2yj3_A Copper-transporting ATP 99.3 4.4E-16 1.5E-20 169.9 0.0 202 75-297 24-252 (263)
275 1ri6_A Putative isomerase YBHE 99.5 2.6E-12 8.8E-17 144.7 31.0 246 612-922 4-262 (343)
276 3hfq_A Uncharacterized protein 99.5 1.3E-12 4.3E-17 148.4 28.5 232 600-875 85-327 (347)
277 1xiy_A Peroxiredoxin, pfaop; a 99.5 2.4E-14 8.2E-19 145.4 11.9 123 425-555 2-154 (182)
278 3e8m_A Acylneuraminate cytidyl 99.5 4.7E-15 1.6E-19 149.5 6.6 111 173-297 39-150 (164)
279 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.8E-12 6.2E-17 148.6 28.5 267 600-923 39-342 (365)
280 3hxs_A Thioredoxin, TRXP; elec 99.5 1.5E-14 5.2E-19 141.7 8.9 104 437-570 36-139 (141)
281 3qgm_A P-nitrophenyl phosphata 99.5 4.6E-14 1.6E-18 154.5 13.7 76 218-295 183-266 (268)
282 2p9w_A MAL S 1 allergenic prot 99.5 2.6E-12 9.1E-17 140.7 27.0 267 597-911 9-304 (334)
283 2ism_A Putative oxidoreductase 99.5 7E-13 2.4E-17 151.1 23.5 230 656-923 30-298 (352)
284 1nir_A Nitrite reductase; hemo 99.5 5.2E-12 1.8E-16 152.6 32.3 253 607-933 144-419 (543)
285 1pby_B Quinohemoprotein amine 99.5 6.7E-12 2.3E-16 140.8 31.1 248 602-932 35-319 (337)
286 3sjl_D Methylamine dehydrogena 99.5 5E-12 1.7E-16 143.5 29.0 261 609-933 41-373 (386)
287 3qqz_A Putative uncharacterize 99.5 8.5E-12 2.9E-16 133.6 29.0 224 598-867 24-253 (255)
288 3no2_A Uncharacterized protein 99.5 9.3E-12 3.2E-16 136.7 30.2 224 603-899 39-273 (276)
289 1k1e_A Deoxy-D-mannose-octulos 99.5 1E-14 3.5E-19 149.5 6.1 116 167-296 37-153 (180)
290 3ul3_B Thioredoxin, thioredoxi 99.5 4.9E-14 1.7E-18 135.6 10.5 106 427-566 21-126 (128)
291 3zvl_A Bifunctional polynucleo 99.5 3.9E-14 1.3E-18 164.5 11.4 96 166-264 88-216 (416)
292 3mmz_A Putative HAD family hyd 99.5 2.1E-15 7.2E-20 153.9 0.5 100 173-287 47-146 (176)
293 2iwa_A Glutamine cyclotransfer 99.5 5.5E-12 1.9E-16 135.8 27.1 209 601-866 21-236 (266)
294 3skx_A Copper-exporting P-type 99.5 3.6E-15 1.2E-19 164.2 2.2 200 76-297 10-259 (280)
295 2ghs_A AGR_C_1268P; regucalcin 99.5 4.1E-12 1.4E-16 143.3 27.3 206 657-931 49-267 (326)
296 3pdw_A Uncharacterized hydrola 99.5 1.4E-14 4.8E-19 158.5 6.8 81 209-289 170-254 (266)
297 3ij5_A 3-deoxy-D-manno-octulos 99.5 1.2E-14 4E-19 152.5 5.8 103 173-289 84-186 (211)
298 2mad_H Methylamine dehydrogena 99.5 3.4E-11 1.2E-15 138.2 34.8 253 610-923 30-351 (373)
299 1jmx_B Amine dehydrogenase; ox 99.5 6.5E-12 2.2E-16 141.8 28.4 265 604-931 3-333 (349)
300 2av4_A Thioredoxin-like protei 99.5 7.8E-14 2.7E-18 134.6 10.3 94 452-574 40-143 (160)
301 3a9g_A Putative uncharacterize 99.5 2.4E-12 8.3E-17 146.5 24.1 227 656-923 28-297 (354)
302 2fwh_A Thiol:disulfide interch 99.5 1.2E-14 4.3E-19 141.1 4.3 117 425-568 5-126 (134)
303 3zzx_A Thioredoxin; oxidoreduc 99.5 1.4E-13 5E-18 127.0 11.0 87 450-567 17-103 (105)
304 3scy_A Hypothetical bacterial 99.5 1.1E-11 3.8E-16 141.4 29.1 221 657-921 50-290 (361)
305 1nir_A Nitrite reductase; hemo 99.5 2.2E-11 7.5E-16 147.2 32.8 256 603-931 181-467 (543)
306 3mn1_A Probable YRBI family ph 99.5 4.5E-14 1.5E-18 145.8 7.8 102 173-288 54-155 (189)
307 3bwv_A Putative 5'(3')-deoxyri 99.5 2.5E-13 8.6E-18 139.1 12.7 166 78-295 3-175 (180)
308 3sre_A PON1, serum paraoxonase 99.5 1.4E-11 5E-16 138.5 28.0 208 600-866 49-297 (355)
309 3bws_A Protein LP49; two-domai 99.4 4.3E-11 1.5E-15 139.9 31.4 243 602-923 124-391 (433)
310 3f9u_A Putative exported cytoc 99.4 5.6E-14 1.9E-18 142.8 5.8 124 445-574 40-170 (172)
311 2ju5_A Thioredoxin disulfide i 99.4 4.6E-14 1.6E-18 140.6 5.0 110 442-570 37-152 (154)
312 3n07_A 3-deoxy-D-manno-octulos 99.4 1.7E-13 5.8E-18 141.8 9.2 104 172-289 59-162 (195)
313 3n1u_A Hydrolase, HAD superfam 99.4 6.2E-14 2.1E-18 145.0 5.7 103 173-289 54-156 (191)
314 3qfa_C Thioredoxin; protein-pr 99.4 2.7E-13 9.3E-18 127.9 9.4 88 450-568 28-115 (116)
315 3gix_A Thioredoxin-like protei 99.4 2.9E-13 1E-17 133.8 9.7 93 452-573 22-124 (149)
316 3p2a_A Thioredoxin 2, putative 99.4 7.2E-13 2.5E-17 130.9 11.8 114 426-571 31-144 (148)
317 1mda_H Methylamine dehydrogena 99.4 7.9E-12 2.7E-16 142.2 21.5 261 612-931 31-354 (368)
318 2r8e_A 3-deoxy-D-manno-octulos 99.4 4.2E-13 1.4E-17 138.4 10.0 110 173-296 61-171 (188)
319 2l5l_A Thioredoxin; structural 99.4 7.4E-13 2.5E-17 128.8 10.8 91 452-571 37-127 (136)
320 2qsi_A Putative hydrogenase ex 99.4 8.7E-13 3E-17 125.6 10.7 89 454-571 34-124 (137)
321 2voc_A Thioredoxin; electron t 99.4 6.4E-13 2.2E-17 124.5 9.6 88 452-568 16-103 (112)
322 2dml_A Protein disulfide-isome 99.4 1.3E-12 4.5E-17 125.8 12.1 94 452-573 34-127 (130)
323 3qqz_A Putative uncharacterize 99.4 1.8E-10 6.2E-15 123.3 29.8 222 657-922 27-253 (255)
324 3f3q_A Thioredoxin-1; His TAG, 99.4 7.2E-13 2.4E-17 123.5 9.7 86 452-568 23-108 (109)
325 2ppt_A Thioredoxin-2; thiredox 99.4 5.2E-13 1.8E-17 133.0 9.3 90 452-570 63-152 (155)
326 2trx_A Thioredoxin; electron t 99.4 1.3E-12 4.4E-17 121.3 11.4 89 452-569 19-107 (108)
327 1fwx_A Nitrous oxide reductase 99.4 1.1E-11 3.8E-16 146.0 21.9 259 611-923 100-432 (595)
328 1cru_A Protein (soluble quinop 99.4 1.7E-11 5.8E-16 144.0 22.8 175 595-795 21-249 (454)
329 3nok_A Glutaminyl cyclase; bet 99.4 4.7E-11 1.6E-15 126.7 23.8 205 659-920 57-264 (268)
330 2o8v_B Thioredoxin 1; disulfid 99.4 1.1E-12 3.7E-17 126.1 10.2 89 452-569 39-127 (128)
331 3tco_A Thioredoxin (TRXA-1); d 99.4 8.2E-13 2.8E-17 122.7 9.0 89 452-569 20-108 (109)
332 4euy_A Uncharacterized protein 99.4 6.3E-13 2.1E-17 122.9 8.1 87 452-568 17-103 (105)
333 1qks_A Cytochrome CD1 nitrite 99.4 4.1E-10 1.4E-14 135.9 34.7 256 608-933 163-438 (567)
334 3fk8_A Disulphide isomerase; A 99.4 6.6E-13 2.3E-17 128.6 8.3 94 451-569 27-132 (133)
335 3nol_A Glutamine cyclotransfer 99.4 7.7E-11 2.6E-15 125.2 24.5 203 660-920 46-254 (262)
336 1nsw_A Thioredoxin, TRX; therm 99.4 5.7E-13 1.9E-17 123.0 7.1 88 452-568 16-103 (105)
337 3das_A Putative oxidoreductase 99.4 5.8E-11 2E-15 133.0 24.7 220 656-923 31-293 (347)
338 3mbr_X Glutamine cyclotransfer 99.4 3.9E-10 1.3E-14 118.9 29.5 206 658-921 22-234 (243)
339 1pby_B Quinohemoprotein amine 99.4 1.2E-10 4.1E-15 130.5 27.4 232 614-923 2-270 (337)
340 1dby_A Chloroplast thioredoxin 99.4 1.8E-12 6.3E-17 120.0 10.3 89 452-569 18-106 (107)
341 1t00_A Thioredoxin, TRX; redox 99.4 1.7E-12 5.7E-17 121.5 10.0 90 452-570 22-111 (112)
342 2pu9_C TRX-F, thioredoxin F-ty 99.4 1.9E-12 6.5E-17 120.9 10.4 90 450-569 21-110 (111)
343 1w4v_A Thioredoxin, mitochondr 99.4 2.1E-12 7.1E-17 122.4 10.7 89 452-569 30-118 (119)
344 3d6i_A Monothiol glutaredoxin- 99.4 2.1E-12 7.2E-17 120.8 10.5 91 452-571 20-110 (112)
345 1xfl_A Thioredoxin H1; AT3G510 99.4 2.1E-12 7.2E-17 123.4 10.6 87 452-569 37-123 (124)
346 1qgv_A Spliceosomal protein U5 99.4 1.9E-12 6.5E-17 126.8 10.5 95 452-575 22-126 (142)
347 3c75_H MADH, methylamine dehyd 99.4 8E-11 2.7E-15 136.1 25.7 222 601-872 119-407 (426)
348 3die_A Thioredoxin, TRX; elect 99.4 1.7E-12 5.9E-17 119.9 9.5 89 451-568 17-105 (106)
349 3gyg_A NTD biosynthesis operon 99.4 4.4E-13 1.5E-17 148.5 6.5 128 165-297 122-281 (289)
350 2g8s_A Glucose/sorbosone dehyd 99.3 6.1E-11 2.1E-15 135.0 23.8 236 656-923 17-309 (353)
351 3gnj_A Thioredoxin domain prot 99.3 3.5E-12 1.2E-16 118.9 11.0 90 452-570 21-110 (111)
352 1qks_A Cytochrome CD1 nitrite 99.3 2.8E-10 9.6E-15 137.4 30.6 265 602-923 198-539 (567)
353 1thx_A Thioredoxin, thioredoxi 99.3 3.4E-12 1.2E-16 119.8 10.8 90 452-570 24-113 (115)
354 1x5d_A Protein disulfide-isome 99.3 4.2E-12 1.4E-16 122.7 11.7 93 452-572 24-119 (133)
355 1ep7_A Thioredoxin CH1, H-type 99.3 2.9E-12 1E-16 119.7 10.2 87 453-569 24-110 (112)
356 2e0q_A Thioredoxin; electron t 99.3 2.3E-12 7.9E-17 118.3 9.2 89 452-570 15-103 (104)
357 3d22_A TRXH4, thioredoxin H-ty 99.3 1.8E-12 6.3E-17 126.5 8.9 90 451-571 44-133 (139)
358 3m9j_A Thioredoxin; oxidoreduc 99.3 3.1E-12 1.1E-16 117.9 9.7 88 450-568 17-104 (105)
359 1z6n_A Hypothetical protein PA 99.3 1.4E-12 4.8E-17 130.8 7.9 90 449-569 50-142 (167)
360 2i4a_A Thioredoxin; acidophIle 99.3 4E-12 1.4E-16 117.6 10.3 87 452-567 19-105 (107)
361 3cxg_A Putative thioredoxin; m 99.3 1.5E-12 5.1E-17 126.1 7.7 91 449-570 36-129 (133)
362 2p9w_A MAL S 1 allergenic prot 99.3 7.6E-11 2.6E-15 129.2 21.8 222 657-922 13-265 (334)
363 2qgv_A Hydrogenase-1 operon pr 99.3 1.3E-12 4.6E-17 124.8 6.9 91 452-570 33-125 (140)
364 3nvb_A Uncharacterized protein 99.3 1.7E-12 5.9E-17 145.8 8.7 95 165-266 256-357 (387)
365 2mad_H Methylamine dehydrogena 99.3 5.1E-10 1.7E-14 128.4 29.6 234 602-873 68-356 (373)
366 2kuc_A Putative disulphide-iso 99.3 1.2E-12 4.2E-17 126.0 6.5 100 445-571 20-122 (130)
367 2oiz_A Aromatic amine dehydrog 99.3 4.7E-10 1.6E-14 128.3 29.0 256 612-923 15-335 (361)
368 2dj1_A Protein disulfide-isome 99.3 3.6E-12 1.2E-16 124.4 9.8 101 440-570 22-124 (140)
369 1gh2_A Thioredoxin-like protei 99.3 5.3E-12 1.8E-16 117.0 10.3 87 452-569 20-106 (107)
370 2vlu_A Thioredoxin, thioredoxi 99.3 5E-12 1.7E-16 120.3 10.3 87 452-569 33-119 (122)
371 3hz4_A Thioredoxin; NYSGXRC, P 99.3 5.7E-12 1.9E-16 123.2 11.0 93 452-573 23-115 (140)
372 2oe3_A Thioredoxin-3; electron 99.3 6E-12 2E-16 118.3 10.3 84 452-566 29-112 (114)
373 1r26_A Thioredoxin; redox-acti 99.3 6.4E-12 2.2E-16 120.1 10.6 88 452-570 36-123 (125)
374 2oiz_A Aromatic amine dehydrog 99.3 2.1E-10 7.3E-15 131.2 25.3 239 601-904 51-360 (361)
375 3mbr_X Glutamine cyclotransfer 99.3 1.1E-09 3.7E-14 115.5 28.0 207 601-864 21-232 (243)
376 3nok_A Glutaminyl cyclase; bet 99.3 4.9E-10 1.7E-14 119.0 25.4 205 601-863 55-262 (268)
377 1fb6_A Thioredoxin M; electron 99.3 5.3E-12 1.8E-16 116.3 9.2 88 452-568 17-104 (105)
378 1faa_A Thioredoxin F; electron 99.3 6E-12 2.1E-16 120.1 9.2 89 450-568 34-122 (124)
379 2ece_A 462AA long hypothetical 99.3 8.3E-10 2.8E-14 125.9 28.1 268 611-923 94-426 (462)
380 2xc2_A Thioredoxinn; oxidoredu 99.3 5.9E-12 2E-16 118.8 8.9 88 449-568 29-116 (117)
381 2l6c_A Thioredoxin; oxidoreduc 99.3 4.9E-12 1.7E-16 118.0 8.1 89 451-569 17-105 (110)
382 2yzu_A Thioredoxin; redox prot 99.3 8.1E-12 2.8E-16 115.8 9.6 89 452-569 17-105 (109)
383 3uvt_A Thioredoxin domain-cont 99.3 1.3E-11 4.4E-16 115.0 10.9 89 451-567 19-109 (111)
384 2dj3_A Protein disulfide-isome 99.3 5.5E-12 1.9E-16 122.0 8.6 104 439-570 11-118 (133)
385 1ti3_A Thioredoxin H, PTTRXH1; 99.3 1.3E-11 4.3E-16 115.5 10.8 89 451-570 24-112 (113)
386 1mda_H Methylamine dehydrogena 99.3 6.2E-11 2.1E-15 134.8 18.5 244 602-901 67-366 (368)
387 2j23_A Thioredoxin; immune pro 99.3 3E-12 1E-16 121.8 6.4 89 452-569 32-120 (121)
388 1xwb_A Thioredoxin; dimerizati 99.3 1.3E-11 4.5E-16 113.9 10.5 89 450-568 17-105 (106)
389 1syr_A Thioredoxin; SGPP, stru 99.3 8.2E-12 2.8E-16 116.8 9.2 86 452-568 25-110 (112)
390 3nol_A Glutamine cyclotransfer 99.3 8.9E-10 3E-14 117.1 25.8 205 601-863 43-252 (262)
391 3sre_A PON1, serum paraoxonase 99.3 1.4E-10 4.9E-15 130.3 20.6 205 658-921 51-297 (355)
392 3h79_A Thioredoxin-like protei 99.3 1.2E-11 4.1E-16 118.6 10.1 89 452-567 32-125 (127)
393 2vim_A Thioredoxin, TRX; thior 99.3 1.3E-11 4.3E-16 113.5 9.9 88 450-568 16-103 (104)
394 2wz9_A Glutaredoxin-3; protein 99.3 1E-11 3.5E-16 123.4 9.9 88 452-570 31-118 (153)
395 3aps_A DNAJ homolog subfamily 99.3 4.2E-12 1.5E-16 120.7 6.6 93 452-573 20-116 (122)
396 3ewi_A N-acylneuraminate cytid 99.3 3.4E-11 1.2E-15 121.0 13.4 102 173-289 44-145 (168)
397 1v98_A Thioredoxin; oxidoreduc 99.3 2.3E-11 7.8E-16 118.8 11.9 101 440-570 38-138 (140)
398 1x5e_A Thioredoxin domain cont 99.3 7.1E-12 2.4E-16 120.0 8.0 89 451-569 21-109 (126)
399 2vm1_A Thioredoxin, thioredoxi 99.3 1.6E-11 5.4E-16 115.8 10.2 89 452-571 27-115 (118)
400 1wr8_A Phosphoglycolate phosph 99.3 4.3E-12 1.5E-16 135.5 6.9 200 78-296 2-222 (231)
401 4dw8_A Haloacid dehalogenase-l 99.3 3.7E-12 1.3E-16 140.2 6.6 87 208-298 178-268 (279)
402 1jof_A Carboxy-CIS,CIS-muconat 99.2 3.2E-10 1.1E-14 129.8 22.8 228 603-873 85-347 (365)
403 3qou_A Protein YBBN; thioredox 99.2 1.1E-11 3.6E-16 137.2 9.8 90 451-569 24-113 (287)
404 3apq_A DNAJ homolog subfamily 99.2 8.8E-12 3E-16 131.0 8.4 103 439-571 101-203 (210)
405 2f51_A Thioredoxin; electron t 99.2 1.5E-11 5E-16 116.3 8.9 98 440-567 8-110 (118)
406 3emx_A Thioredoxin; structural 99.2 6.7E-12 2.3E-16 121.8 6.5 98 451-571 30-127 (135)
407 1sen_A Thioredoxin-like protei 99.2 7.9E-13 2.7E-17 133.0 -0.3 104 443-575 37-153 (164)
408 1oaz_A Thioredoxin 1; immune s 99.2 5.4E-12 1.9E-16 120.3 5.3 88 452-568 20-121 (123)
409 3dnp_A Stress response protein 99.2 4.9E-12 1.7E-16 140.0 5.7 125 166-297 143-272 (290)
410 2lst_A Thioredoxin; structural 98.9 1E-12 3.4E-17 126.7 0.0 103 443-572 10-118 (130)
411 2ece_A 462AA long hypothetical 99.2 7.4E-10 2.5E-14 126.3 23.3 233 600-868 137-428 (462)
412 2dj0_A Thioredoxin-related tra 99.2 4.6E-12 1.6E-16 123.3 4.5 89 450-566 23-117 (137)
413 3dxb_A Thioredoxin N-terminall 99.2 1.8E-11 6E-16 129.8 9.1 90 452-570 29-118 (222)
414 2i1u_A Thioredoxin, TRX, MPT46 99.2 1.6E-11 5.4E-16 116.4 7.0 88 452-568 29-116 (121)
415 1fo5_A Thioredoxin; disulfide 99.2 3.2E-11 1.1E-15 106.3 8.5 82 454-568 3-84 (85)
416 3sjl_D Methylamine dehydrogena 99.2 3.2E-09 1.1E-13 120.5 26.8 249 602-902 80-384 (386)
417 3s25_A Hypothetical 7-bladed b 99.2 2.4E-09 8.1E-14 118.6 25.0 216 609-924 61-295 (302)
418 1zma_A Bacterocin transport ac 99.2 5.1E-11 1.8E-15 112.5 9.8 90 452-566 28-117 (118)
419 3kc2_A Uncharacterized protein 99.2 4.4E-13 1.5E-17 151.0 -5.4 72 218-289 242-343 (352)
420 2djj_A PDI, protein disulfide- 99.2 1.7E-11 5.8E-16 116.3 6.3 101 439-569 11-116 (121)
421 1nho_A Probable thioredoxin; b 99.2 2.4E-11 8.3E-16 107.1 6.8 82 455-569 3-84 (85)
422 3s25_A Hypothetical 7-bladed b 99.2 3.1E-09 1.1E-13 117.6 25.2 226 596-924 11-257 (302)
423 2i33_A Acid phosphatase; HAD s 99.2 5.2E-11 1.8E-15 128.5 10.5 98 165-269 101-218 (258)
424 1mek_A Protein disulfide isome 99.2 1.4E-11 4.7E-16 116.4 4.7 90 452-569 23-116 (120)
425 3fzq_A Putative hydrolase; YP_ 99.1 5.5E-11 1.9E-15 130.2 9.3 107 183-298 159-271 (274)
426 1cru_A Protein (soluble quinop 99.1 3.5E-09 1.2E-13 124.3 24.8 174 656-864 26-258 (454)
427 3idv_A Protein disulfide-isome 99.1 6.5E-11 2.2E-15 127.1 9.2 101 440-570 20-122 (241)
428 3ph9_A Anterior gradient prote 99.1 2E-11 7E-16 119.9 4.6 97 450-574 41-146 (151)
429 3ira_A Conserved protein; meth 99.1 6.2E-11 2.1E-15 118.9 7.8 110 444-574 31-148 (173)
430 1ltq_A Polynucleotide kinase; 99.1 1.3E-10 4.3E-15 129.5 10.8 100 165-268 188-299 (301)
431 3dao_A Putative phosphatse; st 99.1 2.5E-10 8.7E-15 125.8 13.0 111 179-296 164-280 (283)
432 1jmx_B Amine dehydrogenase; ox 99.1 8.8E-09 3E-13 115.9 26.0 168 660-873 3-181 (349)
433 3mpo_A Predicted hydrolase of 99.1 8E-12 2.7E-16 137.5 0.5 75 220-298 194-268 (279)
434 2dbc_A PDCL2, unnamed protein 99.1 1.6E-10 5.4E-15 112.0 8.9 72 452-556 29-100 (135)
435 1fwx_A Nitrous oxide reductase 99.1 4.8E-09 1.7E-13 123.7 23.1 249 615-922 17-361 (595)
436 2yj7_A LPBCA thioredoxin; oxid 98.7 9.7E-12 3.3E-16 114.6 0.0 88 452-568 18-105 (106)
437 2es7_A Q8ZP25_salty, putative 99.1 7.7E-11 2.6E-15 115.0 5.9 87 454-570 35-125 (142)
438 3q6k_A 43.2 kDa salivary prote 99.1 4.3E-08 1.5E-12 110.4 29.0 262 601-911 26-343 (381)
439 1wmj_A Thioredoxin H-type; str 99.1 2.1E-11 7.3E-16 117.2 1.8 89 451-570 34-122 (130)
440 3evi_A Phosducin-like protein 99.1 1.7E-10 5.8E-15 108.5 7.5 71 453-556 23-93 (118)
441 2ymu_A WD-40 repeat protein; u 99.1 6.3E-08 2.1E-12 117.5 31.9 241 603-931 306-546 (577)
442 1a8l_A Protein disulfide oxido 99.0 5E-10 1.7E-14 118.9 10.9 90 452-569 133-225 (226)
443 3kp8_A Vkorc1/thioredoxin doma 99.0 1.9E-11 6.6E-16 112.8 -0.2 87 444-565 4-90 (106)
444 1ilo_A Conserved hypothetical 99.0 5E-10 1.7E-14 96.6 8.8 74 456-565 2-76 (77)
445 2pq0_A Hypothetical conserved 99.0 1.3E-10 4.4E-15 126.2 6.2 206 78-297 2-253 (258)
446 2hqs_A Protein TOLB; TOLB, PAL 99.0 5.6E-08 1.9E-12 113.2 29.0 224 623-931 159-394 (415)
447 3q6o_A Sulfhydryl oxidase 1; p 99.0 6E-10 2E-14 119.9 10.8 95 452-573 29-130 (244)
448 2ymu_A WD-40 repeat protein; u 99.0 1.2E-07 4E-12 115.1 32.2 241 603-931 265-505 (577)
449 2rbk_A Putative uncharacterize 99.0 2.9E-11 9.9E-16 131.6 0.2 127 166-296 86-256 (261)
450 1l6r_A Hypothetical protein TA 99.0 8.3E-10 2.8E-14 117.2 11.3 125 168-297 25-223 (227)
451 3dml_A Putative uncharacterize 99.0 1.6E-10 5.6E-15 107.0 4.5 98 450-573 15-113 (116)
452 3l7y_A Putative uncharacterize 99.0 9.5E-10 3.3E-14 122.5 11.3 108 182-296 183-297 (304)
453 2wg3_C Hedgehog-interacting pr 99.0 1.3E-08 4.5E-13 119.1 21.1 287 595-920 8-371 (463)
454 2hls_A Protein disulfide oxido 99.0 1.5E-09 5.1E-14 116.4 11.7 90 450-571 135-227 (243)
455 3ow8_A WD repeat-containing pr 99.0 5.6E-07 1.9E-11 100.7 33.0 231 605-921 85-320 (321)
456 1rlm_A Phosphatase; HAD family 99.0 2E-10 6.7E-15 125.8 3.9 113 178-297 143-261 (271)
457 3t58_A Sulfhydryl oxidase 1; o 99.0 1.3E-09 4.4E-14 129.2 11.0 97 452-573 29-130 (519)
458 3iv4_A Putative oxidoreductase 99.0 9.7E-10 3.3E-14 100.2 7.6 85 453-564 24-110 (112)
459 1wou_A Thioredoxin -related pr 98.9 1.5E-09 5.2E-14 103.2 9.0 93 451-566 22-121 (123)
460 1gxr_A ESG1, transducin-like e 98.9 3.8E-07 1.3E-11 101.6 30.1 234 602-920 99-335 (337)
461 3ed3_A Protein disulfide-isome 98.9 1.2E-09 4E-14 120.9 8.9 91 452-569 34-141 (298)
462 3r4c_A Hydrolase, haloacid deh 98.9 7.3E-10 2.5E-14 120.9 7.2 77 218-298 189-265 (268)
463 1a0r_P Phosducin, MEKA, PP33; 98.9 7.4E-10 2.5E-14 117.7 6.9 74 452-556 132-205 (245)
464 2r2j_A Thioredoxin domain-cont 98.9 1.6E-09 5.6E-14 124.6 10.3 91 452-570 21-117 (382)
465 3idv_A Protein disulfide-isome 98.9 2.5E-09 8.7E-14 114.5 10.8 89 452-569 146-236 (241)
466 2trc_P Phosducin, MEKA, PP33; 98.9 6.8E-10 2.3E-14 116.5 5.9 76 452-558 119-194 (217)
467 1sji_A Calsequestrin 2, calseq 98.9 1.5E-09 5E-14 123.5 8.6 87 452-568 27-120 (350)
468 1got_B GT-beta; complex (GTP-b 98.9 5.2E-06 1.8E-10 93.4 37.0 246 601-931 56-309 (340)
469 2ywm_A Glutaredoxin-like prote 98.9 4E-09 1.4E-13 112.2 9.8 89 452-573 135-223 (229)
470 1gxr_A ESG1, transducin-like e 98.9 1.2E-06 4.2E-11 97.4 30.6 237 602-923 53-297 (337)
471 4gqb_B Methylosome protein 50; 98.9 4.5E-07 1.5E-11 102.7 27.1 240 604-923 86-332 (344)
472 3f8u_A Protein disulfide-isome 98.9 4.7E-09 1.6E-13 124.9 11.0 102 440-569 357-460 (481)
473 3q6k_A 43.2 kDa salivary prote 98.9 5.4E-07 1.8E-11 101.5 27.0 216 597-856 83-343 (381)
474 2dlx_A UBX domain-containing p 98.8 1.3E-08 4.5E-13 99.9 11.7 95 452-576 41-142 (153)
475 3gyk_A 27KDA outer membrane pr 98.8 1.6E-08 5.4E-13 102.6 12.5 119 443-570 13-173 (175)
476 2b5e_A Protein disulfide-isome 98.8 5.9E-09 2E-13 124.8 10.8 90 452-569 30-121 (504)
477 3ow8_A WD repeat-containing pr 98.8 2.5E-06 8.7E-11 95.3 31.4 238 604-923 36-280 (321)
478 3pgv_A Haloacid dehalogenase-l 98.8 6.5E-10 2.2E-14 122.6 1.2 115 178-296 159-280 (285)
479 3f8u_A Protein disulfide-isome 98.8 7.4E-09 2.5E-13 123.2 10.4 89 452-569 20-108 (481)
480 3uem_A Protein disulfide-isome 98.8 1.3E-08 4.3E-13 116.4 11.6 86 452-566 266-353 (361)
481 1eej_A Thiol:disulfide interch 98.8 1.1E-08 3.8E-13 107.6 9.9 115 449-572 82-213 (216)
482 2ojh_A Uncharacterized protein 98.8 1.4E-06 4.7E-11 94.7 26.8 220 621-923 20-259 (297)
483 3ga4_A Dolichyl-diphosphooligo 98.8 1.5E-08 5.2E-13 101.4 9.9 91 452-569 36-152 (178)
484 3amr_A 3-phytase; beta-propell 98.8 4.3E-06 1.5E-10 92.4 29.9 201 612-874 39-272 (355)
485 2hqs_A Protein TOLB; TOLB, PAL 98.8 8.3E-07 2.8E-11 103.2 25.8 203 603-875 181-395 (415)
486 2xyi_A Probable histone-bindin 98.8 6.7E-07 2.3E-11 104.5 25.0 240 602-923 130-411 (430)
487 3ocu_A Lipoprotein E; hydrolas 98.8 6.7E-09 2.3E-13 110.5 6.9 83 165-254 101-188 (262)
488 2ecf_A Dipeptidyl peptidase IV 98.8 7.6E-07 2.6E-11 111.7 27.1 270 601-922 37-369 (741)
489 2z3z_A Dipeptidyl aminopeptida 98.8 5.5E-06 1.9E-10 103.2 34.5 258 603-923 123-436 (706)
490 3frx_A Guanine nucleotide-bind 98.8 3.6E-06 1.2E-10 93.9 29.5 242 604-922 69-317 (319)
491 4ery_A WD repeat-containing pr 98.8 1.4E-05 4.7E-10 88.4 34.1 240 602-923 25-269 (312)
492 4g56_B MGC81050 protein; prote 98.7 4.8E-07 1.7E-11 102.9 22.4 242 603-923 97-344 (357)
493 3qcp_A QSOX from trypanosoma b 98.7 1.4E-08 4.7E-13 117.1 9.2 93 452-571 41-153 (470)
494 1vyh_C Platelet-activating fac 98.7 3E-06 1E-10 98.3 29.4 243 602-931 110-377 (410)
495 1nrw_A Hypothetical protein, h 98.7 6.2E-09 2.1E-13 114.9 6.0 72 221-296 214-285 (288)
496 2ojh_A Uncharacterized protein 98.7 1.7E-06 5.8E-11 94.0 25.3 227 603-909 44-290 (297)
497 2ynn_A Coatomer subunit beta'; 98.7 9.9E-06 3.4E-10 89.5 31.8 244 603-931 16-267 (304)
498 3zwl_B Eukaryotic translation 98.7 8.4E-06 2.9E-10 91.7 31.8 247 602-923 34-305 (369)
499 3pct_A Class C acid phosphatas 98.7 7.6E-09 2.6E-13 109.9 5.9 84 164-254 100-188 (260)
500 3us3_A Calsequestrin-1; calciu 98.7 3.6E-08 1.2E-12 112.6 11.3 89 452-569 29-123 (367)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=2.7e-30 Score=301.67 Aligned_cols=278 Identities=21% Similarity=0.292 Sum_probs=224.2
Q ss_pred CCCCCCCceEEEee-cCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEE-------eeCC
Q 001380 597 TSPLKFPGKLAIDI-LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY-------NAKK 668 (1089)
Q Consensus 597 ~~~l~~P~~vavd~-~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~-------d~~g 668 (1089)
...|..|.+|++|| .+++|||++..+++|.++|+.++.+.++...+. ..|++|.+|++ +++|
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~----------~~~~~p~~ia~~~~~~~~d~~G 204 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT----------IPTNRIRSIAFNKKIEGYADEA 204 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT----------SSCSBEEEEEECCCBTTTBCTT
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc----------cccCCCcEEEEeecccccCCCC
Confidence 45688999999998 479999999999999999999888877765432 13779999999 9999
Q ss_pred CEEEEEECCC------CEEEEEECCC-CeE------EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC
Q 001380 669 NLLYVADTEN------HALREIDFVN-DTV------RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735 (1089)
Q Consensus 669 ~~lyVaD~~n------~~I~~~d~~~-g~v------~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~ 735 (1089)
+.|||+|..+ +.|..++... |.+ .+++ .+..|++++++|+++.||+++.
T Consensus 205 ~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------------------~~~~p~giavdp~~g~LYvtd~ 266 (496)
T 3kya_A 205 EYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA------------------AYKQCNGATIHPINGELYFNSY 266 (496)
T ss_dssp CEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------------------EESCCCCEEECTTTCCEEEEET
T ss_pred CEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec------------------cCCCceEEEEcCCCCeEEEEEC
Confidence 9999999876 4577886543 221 1221 2458999999998889999999
Q ss_pred CCcEEEEEECC-------CCeE------------EEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCe
Q 001380 736 GQHQIWEHSTV-------DGVT------------RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS 796 (1089)
Q Consensus 736 ~~~~I~~~~~~-------~g~~------------~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~ 796 (1089)
++++|+++|+. ++.+ ..+... ..-.+|.+|+++++|+.|||+|+.+++
T Consensus 267 ~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-------------~~~~~p~~ia~~p~G~~lYvaD~~~h~ 333 (496)
T 3kya_A 267 EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-------------ADPSWEFQIFIHPTGKYAYFGVINNHY 333 (496)
T ss_dssp TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-------------SSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred CCCEEEEEecccccccccCceeecccccccccccceeEec-------------CCCCCceEEEEcCCCCEEEEEeCCCCE
Confidence 99999999987 5554 111100 112468999999999889999999999
Q ss_pred EEEEEcCCCC--e---EEEecCCCCCCCCccccCCCCCccccccccCce-EEEEc-------cCCcEEEEeCCCCEEEEE
Q 001380 797 IRALNLKTGG--S---RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL-GVYCA-------KNGQIYVADSYNHKIKKL 863 (1089)
Q Consensus 797 I~~~~~~~~~--~---~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~-gva~~-------~~G~lyVaD~~n~~I~~~ 863 (1089)
|++++.++.. + .+++|.. -..|..||.+..++|++|. +++++ .+|+|||||+.||+|++|
T Consensus 334 I~kid~dg~~~~~~~~~~~aG~~-------g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i 406 (496)
T 3kya_A 334 FMRSDYDEIKKEFITPYNFVGGY-------KQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKV 406 (496)
T ss_dssp EEEEEEETTTTEECCCEEEEEBT-------TBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEE
T ss_pred EEEEecCCCcceecccEEecCCC-------CCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEE
Confidence 9998876432 2 4566631 1235568899999999999 88887 678999999999999999
Q ss_pred eCCCCeEEEEeccCCC---------CCCCC-cccccccCCCceEEEccC-CcEEEEECCCCEEEEEeCCCC
Q 001380 864 DPASNRVSTLAGIGKA---------GFKDG-AALAAQLSEPAGIIEAQN-GNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 864 d~~~~~v~t~~g~g~~---------g~~~g-~~~~~~l~~P~gi~vd~~-G~lyVad~~n~~I~~~~~~~~ 923 (1089)
+++ |.++|++|.|.. |+.+| .+..++|+.|.||++|++ |+|||+|+.||||+++++++.
T Consensus 407 ~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 407 TPE-GIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp CTT-CBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred eCC-CCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 975 699999998763 67777 688999999999999996 999999999999999999987
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.97 E-value=5.4e-29 Score=292.28 Aligned_cols=272 Identities=17% Similarity=0.205 Sum_probs=214.9
Q ss_pred CCCCCCCceEEEee--cCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEE
Q 001380 597 TSPLKFPGKLAIDI--LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674 (1089)
Q Consensus 597 ~~~l~~P~~vavd~--~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVa 674 (1089)
++.|..|.+|++|+ .+|+|||+|.. ++|.++++.+..+..+... +..|.+|+++++|+ |||+
T Consensus 135 a~~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~--------------~~~P~giavd~dG~-lyVa 198 (433)
T 4hw6_A 135 CGAFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTN--------------IGQCADVNFTLNGD-MVVV 198 (433)
T ss_dssp CCCCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCC--------------CSCEEEEEECTTCC-EEEE
T ss_pred hcccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecC--------------CCCccEEEECCCCC-EEEE
Confidence 34789999999998 36999999998 9999999965555555432 56899999999999 9999
Q ss_pred ECCCC----EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeE
Q 001380 675 DTENH----ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT 750 (1089)
Q Consensus 675 D~~n~----~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~ 750 (1089)
|..++ .+..++..++... ......+..|+++++++.++.|||++.++++|+++++.++.+
T Consensus 199 d~~~~~~~~gv~~~~~~~~~~~----------------~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 199 DDQSSDTNTGIYLFTRASGFTE----------------RLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp ECCSCTTSEEEEEECGGGTTCC----------------EEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cCCCCcccceEEEEECCCCeec----------------cccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 98653 3444443322210 001124679999999996669999999999999999987776
Q ss_pred -EEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCC--CC---eEEEecCCCCCCCCcccc
Q 001380 751 -RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT--GG---SRLLAGGDPIFPDNLFKF 824 (1089)
Q Consensus 751 -~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~--~~---~~~~~g~~~~~~~~l~~~ 824 (1089)
..+...+. ...+.+|+++++|++|||+|..+++|++++.+. +. ..+++|.. ...
T Consensus 263 ~~~~~~~~~-------------~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~-------g~~ 322 (433)
T 4hw6_A 263 TEEEVMMDT-------------KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQH-------SSP 322 (433)
T ss_dssp EEEEEECSC-------------CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECT-------TCC
T ss_pred EEEEeccCC-------------CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecC-------CCC
Confidence 44432221 124668999999988999999999999998763 22 23555521 123
Q ss_pred CCCCCccccccccCceEEEE---------ccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCC---CCCCCC-ccccccc
Q 001380 825 GDRDGMGSEVLLQHPLGVYC---------AKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK---AGFKDG-AALAAQL 891 (1089)
Q Consensus 825 g~~dg~~~~~~l~~P~gva~---------~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~---~g~~~g-~~~~~~l 891 (1089)
|..||.+..++|.+|.|+++ +.+|+|||||+.||+|++++++ |.+++++|.+. .|+.+| .+..++|
T Consensus 323 g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~ 401 (433)
T 4hw6_A 323 GWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-GRVTTYAGRGNSREWGYVDGELRSQALF 401 (433)
T ss_dssp CCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-SEEEEEECCCTTCSSCCBCEETTTTCBC
T ss_pred ccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-CCEEEEEeCCCCCccccCCCccccccEe
Confidence 55578888999999999999 8899999999999999999984 69999999876 677777 6778899
Q ss_pred CCCceEEEc-cCCcEEEEECCCCEEEEEeCC
Q 001380 892 SEPAGIIEA-QNGNLFIADTNNNIIRYLDLN 921 (1089)
Q Consensus 892 ~~P~gi~vd-~~G~lyVad~~n~~I~~~~~~ 921 (1089)
+.|.||+++ ++|+|||+|+.||+|++++++
T Consensus 402 ~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 402 NHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 999999999 789999999999999999875
No 3
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.3e-28 Score=289.24 Aligned_cols=271 Identities=18% Similarity=0.266 Sum_probs=217.4
Q ss_pred CCCCCCCceEEEee-cCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEE
Q 001380 597 TSPLKFPGKLAIDI-LNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675 (1089)
Q Consensus 597 ~~~l~~P~~vavd~-~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD 675 (1089)
...|.+|.+|++|| .+++|||+|.. ++|.++++++..+..+... +..|.+|+++++|+.|||+|
T Consensus 133 ~~~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~--------------~~~P~~ia~d~~G~~lyvad 197 (430)
T 3tc9_A 133 CGGFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSG--------------LSKVRTICWTHEADSMIITN 197 (430)
T ss_dssp CBCCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECC--------------CSCEEEEEECTTSSEEEEEE
T ss_pred ccCCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecC--------------CCCcceEEEeCCCCEEEEEe
Confidence 45689999999997 47999999998 9999999998777666542 45899999999999999999
Q ss_pred CCCC----EEEEEECCCCeE--EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCe
Q 001380 676 TENH----ALREIDFVNDTV--RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749 (1089)
Q Consensus 676 ~~n~----~I~~~d~~~g~v--~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~ 749 (1089)
..++ .+..++.+++.. ..+. .+..|++++++|+++.|||+|.++++|+++++.++.
T Consensus 198 ~~~~~~~~~v~~~~~~g~~~~~~~l~------------------~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 198 DQNNNDRPNNYILTRESGFKVITELT------------------KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp CCSCTTSEEEEEEEGGGTSCSEEEEE------------------ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCceeeeeeec------------------cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 8544 566677654332 2222 256899999999666999999999999999999887
Q ss_pred EEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCC-----eEEEecCCCCCCCCcccc
Q 001380 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG-----SRLLAGGDPIFPDNLFKF 824 (1089)
Q Consensus 750 ~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~-----~~~~~g~~~~~~~~l~~~ 824 (1089)
...+...+ ...+|+||+++++|++|||+|..+++|++++.++.. ..++++.. ...
T Consensus 260 ~~~~~~~~-------------~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-------g~~ 319 (430)
T 3tc9_A 260 TTPLFTIQ-------------DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ-------GAK 319 (430)
T ss_dssp EEEEEECS-------------SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECT-------TCB
T ss_pred EEEEEEcC-------------CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccC-------CCC
Confidence 75443211 124799999999998899999999999999887431 33455421 123
Q ss_pred CCCCCccccccccCce-EEEEc--------cCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCC---CCCCCC-ccccccc
Q 001380 825 GDRDGMGSEVLLQHPL-GVYCA--------KNGQIYVADSYNHKIKKLDPASNRVSTLAGIGK---AGFKDG-AALAAQL 891 (1089)
Q Consensus 825 g~~dg~~~~~~l~~P~-gva~~--------~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~---~g~~~g-~~~~~~l 891 (1089)
|..+|.+..++|.+|. |++++ ++|+|||+|+.||+|++++++ |.+++++|.+. .|+.+| .+..++|
T Consensus 320 g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~-G~v~~~~g~g~~~~~G~~dG~~~~~~~~ 398 (430)
T 3tc9_A 320 DWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ-GRVTTFAGRGSNGTSGYNDGDLRQEARF 398 (430)
T ss_dssp CCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT-SEEEEEEECCTTSSSSCBCEETTTTCBC
T ss_pred CCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC-CcEEEEEeCCCCCCCcccCCCchhhcEe
Confidence 4557777888999999 89984 568999999999999999975 68999998753 455566 5778899
Q ss_pred CCCceEEEcc-CCcEEEEECCCCEEEEEeCC
Q 001380 892 SEPAGIIEAQ-NGNLFIADTNNNIIRYLDLN 921 (1089)
Q Consensus 892 ~~P~gi~vd~-~G~lyVad~~n~~I~~~~~~ 921 (1089)
+.|.||++|+ +|+|||+|++||+|++++++
T Consensus 399 ~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 399 NHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 9999999998 68999999999999999875
No 4
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.96 E-value=8.8e-28 Score=280.65 Aligned_cols=277 Identities=19% Similarity=0.227 Sum_probs=223.9
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
..|..|.+|++|+ +|+|||+|..+++|.++++++..+.++... ...|. ++++++|+.||++|..
T Consensus 128 a~~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--------------~~~~~-ia~~~~g~~l~~~d~~ 191 (409)
T 3hrp_A 128 AKFKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPG--------------FKGGK-PAVTKDKQRVYSIGWE 191 (409)
T ss_dssp CCCCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEET--------------CCBCB-CEECTTSSEEEEEBSS
T ss_pred cccCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeecc--------------CCCCc-eeEecCCCcEEEEecC
Confidence 4789999999996 889999999999999999997666665443 13577 9999999999999985
Q ss_pred C-CEEEEEECCCCeE-EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeC
Q 001380 678 N-HALREIDFVNDTV-RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG 755 (1089)
Q Consensus 678 n-~~I~~~d~~~g~v-~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g 755 (1089)
. ++|++++..++.. ..+..... ..+..|++++++|+++.||+++. +++|+++|+.++....+.+
T Consensus 192 ~~~~I~~~d~~~~~~~~~~g~~~~-------------~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~ 257 (409)
T 3hrp_A 192 GTHTVYVYMKASGWAPTRIGQLGS-------------TFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQ 257 (409)
T ss_dssp TTCEEEEEEGGGTTCEEEEEECCT-------------TSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEE
T ss_pred CCceEEEEEcCCCceeEEeeeccc-------------hhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEec
Confidence 5 4999999877654 33311110 12468999999997679999775 7899999999888777765
Q ss_pred CCccccCCCCCCCCccccCCc-eEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccc
Q 001380 756 DGYERNLNGSSSLNTSFAQPS-GISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834 (1089)
Q Consensus 756 ~g~~~~~~g~~~~~~~~~~P~-glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~ 834 (1089)
.+... .....|. +|++++++++|||+|..+++|++++.++ ...+++|.. ...|..+|.+..+
T Consensus 258 ~~~~g---------~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g-~~~~~~g~~-------~~~g~~dg~~~~~ 320 (409)
T 3hrp_A 258 LELSG---------SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG-ECEWFCGSA-------TQKTVQDGLREEA 320 (409)
T ss_dssp CCCCS---------CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECT-------TCCSCBCEEGGGC
T ss_pred ccccC---------CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC-CEEEEEeCC-------CCCCcCCCccccc
Confidence 43211 1112366 9999997669999999999999999875 466666642 1234566777888
Q ss_pred cccCceEEEEccCCcEEEEeC-CCCEEEEEeCCCCeEEEEecc-CCCCCCCCcccccccCCCceEEEccCCcEEEEECCC
Q 001380 835 LLQHPLGVYCAKNGQIYVADS-YNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912 (1089)
Q Consensus 835 ~l~~P~gva~~~~G~lyVaD~-~n~~I~~~d~~~~~v~t~~g~-g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n 912 (1089)
+|.+|.||+++++|+|||+|+ .+++|+++++.++.+.+++|. +..|+.+|.+..++|+.|.||+++++|+|||+|+.|
T Consensus 321 ~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n 400 (409)
T 3hrp_A 321 LFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG 400 (409)
T ss_dssp BCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred EeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence 999999999999999999999 999999999777899999987 566778887788899999999999999999999999
Q ss_pred CEEEEEeCC
Q 001380 913 NIIRYLDLN 921 (1089)
Q Consensus 913 ~~I~~~~~~ 921 (1089)
++|++++++
T Consensus 401 ~~Ir~i~~e 409 (409)
T 3hrp_A 401 KAIRKYAVE 409 (409)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEeC
Confidence 999999863
No 5
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=99.95 E-value=7.8e-27 Score=247.69 Aligned_cols=206 Identities=31% Similarity=0.352 Sum_probs=178.5
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHh
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKY 158 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (1089)
+|+|+||+||||+|+...+..++.++++++|++.+.+.+..+.+.................. ..+.....+.+.+...+
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKD-SLENFKKRVHEEKKRVF 79 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCS-CHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccchh-hHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999988888888888877776666555443 55556666666555444
Q ss_pred cCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCC
Q 001380 159 AKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVP 238 (1089)
Q Consensus 159 ~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~ 238 (1089)
.... .++||+.++++.|+++|++++|+||+.+..+...++.+|+. .+||.++++++++..||+|++|+.+++++|++
T Consensus 80 ~~~~--~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~-~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~ 156 (216)
T 3kbb_A 80 SELL--KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE-KYFDVMVFGDQVKNGKPDPEIYLLVLERLNVV 156 (216)
T ss_dssp HHHC--CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECGGGSSSCTTSTHHHHHHHHHHTCC
T ss_pred HHhc--ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC-ccccccccccccCCCcccHHHHHHHHHhhCCC
Confidence 3333 68999999999999999999999999999999999999996 99999999999999999999999999999999
Q ss_pred CCcEEEEcCChhhHHHHHHcCCeEEE-EcCCC-CHHHHhhcCCcEEecCcccC
Q 001380 239 TSECIVIEDALAGVQAAKAAQMRCIA-VTTTL-SEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 239 p~~~v~VGD~~~Di~aA~~aG~~~i~-V~~g~-~~~~l~~~~~d~vi~dl~el 289 (1089)
|++|+||||+.+|+++|+++||++|+ |.+|. ..+.+.+++++.+. ++.++
T Consensus 157 p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~~~el 208 (216)
T 3kbb_A 157 PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-KPEEI 208 (216)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-CGGGH
T ss_pred ccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-CHHHH
Confidence 99999999999999999999999985 78876 67788888888776 45554
No 6
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=99.95 E-value=5.2e-27 Score=254.16 Aligned_cols=212 Identities=26% Similarity=0.384 Sum_probs=174.7
Q ss_pred CCCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCC-CHH---HHHHHH
Q 001380 75 KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGF-DSE---AAKKRF 150 (1089)
Q Consensus 75 ~~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~ 150 (1089)
|+|++|+||||+||||+|+...+..++.++++++|++.+.+.+..+.+.+.......+....+.... ... ....+.
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRK 80 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHH
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999888888888888888887777766554321 221 122222
Q ss_pred HHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHH
Q 001380 151 FEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLS 230 (1089)
Q Consensus 151 ~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~ 230 (1089)
...+...+.......++||+.++++.|+++|++++++||.. ..+..++.+|+. .+||.++++++++.+||+|++|..
T Consensus 81 ~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~ 157 (243)
T 4g9b_A 81 NLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELR-EFFTFCADASQLKNSKPDPEIFLA 157 (243)
T ss_dssp HHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCG-GGCSEECCGGGCSSCTTSTHHHHH
T ss_pred HHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhc-cccccccccccccCCCCcHHHHHH
Confidence 23333444333334689999999999999999999999964 357789999996 999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 231 ~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
+++++|++|++|+||||+.+||++|+++||++|+|.+|.+ +++.++++..++.+.++-.
T Consensus 158 a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~-------~ad~~~~~~~~l~~~~l~~ 216 (243)
T 4g9b_A 158 ACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT-------GAQLLLPSTESLTWPRLSA 216 (243)
T ss_dssp HHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC-------SCSEEESSGGGCCHHHHHH
T ss_pred HHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC-------cHHHhcCChhhcCHHHHHH
Confidence 9999999999999999999999999999999999999853 5778888888887665544
No 7
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.95 E-value=5.6e-26 Score=257.90 Aligned_cols=274 Identities=22% Similarity=0.331 Sum_probs=208.8
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCC------------------------EEEEEeCC-CCEEEEEecCCCCCCCCCCCC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHN------------------------RIVVTDLD-GNFIVQIGSSGEEGLRDGSFD 652 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~------------------------~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~ 652 (1089)
..|..|.+|++|+ +|++||++.+++ +|+++|.+ |+++..++..
T Consensus 21 ~~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~----------- 88 (329)
T 3fvz_A 21 LLPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKN----------- 88 (329)
T ss_dssp CCCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTT-----------
T ss_pred eecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCC-----------
Confidence 4678899999997 899999999884 69999986 8887665532
Q ss_pred ccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCC--eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEE
Q 001380 653 DATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND--TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKV 730 (1089)
Q Consensus 653 ~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g--~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~l 730 (1089)
.|..|.||+++++|+ |||+|..+++|+++++++. .+.++...+..+.. ...+..|++|+++++++.|
T Consensus 89 --~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~--------~~~~~~P~~ia~~~~~g~l 157 (329)
T 3fvz_A 89 --LFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSD--------QNHFCQPTDVAVEPSTGAV 157 (329)
T ss_dssp --TCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCS--------TTCCSSEEEEEECTTTCCE
T ss_pred --ccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCC--------ccccCCCcEEEEeCCCCeE
Confidence 377999999999999 9999999999999999876 57777654443321 2357899999999955599
Q ss_pred EEEEC-CCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCe-E
Q 001380 731 YIAMA-GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS-R 808 (1089)
Q Consensus 731 yvad~-~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~-~ 808 (1089)
||++. ++++|++|+..+..+..+...+.. ..+....+..|.||++++++++|||+|..+++|+++++++|.. .
T Consensus 158 yv~d~~~~~~I~~~~~~g~~~~~~~~~g~~-----~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPSGKFVTQWGEESSG-----SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR 232 (329)
T ss_dssp EEEECSSCCEEEEECTTSCEEEEECEECCS-----SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEeCCCCCeEEEEcCCCCEEEEeccCCCC-----CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 99996 799999999776666666543321 1122356889999999999559999999999999999985544 3
Q ss_pred EEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccc
Q 001380 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA 888 (1089)
Q Consensus 809 ~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~ 888 (1089)
.+.... ++ ++ ......+| |++++.+|++||+|..+++|+++|..++.+....+.+.
T Consensus 233 ~~~~~~---------~~--~~--~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~---------- 288 (329)
T 3fvz_A 233 EIKHAS---------FG--RN--VFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR---------- 288 (329)
T ss_dssp EECCTT---------TT--TC--EEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS----------
T ss_pred EEeccc---------cC--CC--cceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC----------
Confidence 332110 01 00 00111234 66666689999999999999999977676655543221
Q ss_pred cccCCCceEEEccCCcEEEEECCCCEEEEEeCCCC
Q 001380 889 AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 889 ~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
..+..|.+|+++++|+|||+|..+++|+++++.+.
T Consensus 289 ~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 289 KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 26788999999999999999999999999998764
No 8
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.94 E-value=5.4e-26 Score=240.34 Aligned_cols=201 Identities=19% Similarity=0.273 Sum_probs=165.4
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCC-CHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEV-TVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+|+...+..++.++++++|+.. ..+.+..+.+.+.......+ .......+..+.+.+.+..
T Consensus 3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 77 (210)
T 2ah5_A 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC-----LSKDQISEAVQIYRSYYKA 77 (210)
T ss_dssp TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT-----SCGGGHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH-----cCHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999875 45666667676654433222 1211233444444444443
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcC
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILN 236 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lg 236 (1089)
.... ...++||+.++|+.|++ |++++|+||+.+..++..++++|+. .+|+.+++++ ...||+|++|+++++++|
T Consensus 78 ~~~~--~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~-~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg 151 (210)
T 2ah5_A 78 KGIY--EAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH-HFFDGIYGSS--PEAPHKADVIHQALQTHQ 151 (210)
T ss_dssp TGGG--SCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEEC--SSCCSHHHHHHHHHHHTT
T ss_pred hccC--CCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCch-hheeeeecCC--CCCCCChHHHHHHHHHcC
Confidence 3221 23689999999999999 9999999999998999999999996 9999999988 778999999999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccC
Q 001380 237 VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 237 v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el 289 (1089)
++|++|+||||+.+|+++|+++|+++++|.+|. ..+++....|++++.++.++
T Consensus 152 ~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el 205 (210)
T 2ah5_A 152 LAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred CCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 999999999999999999999999999999987 46677767899999999887
No 9
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=99.93 E-value=1.1e-25 Score=244.93 Aligned_cols=214 Identities=26% Similarity=0.329 Sum_probs=173.7
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHH----HHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSE----AAKKRFFE 152 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 152 (1089)
.|+|+||||+||||+|+...+..++.++++++|++.+.+....+.+.........+...........+ ...+++.+
T Consensus 24 ~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 4gib_A 24 AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNN 103 (250)
T ss_dssp CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred chhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999887777778888877777666654433222222 22333334
Q ss_pred HHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHH
Q 001380 153 IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSAS 232 (1089)
Q Consensus 153 ~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l 232 (1089)
.+...........++||+.++++.|+++|+++++.|+. ......++++|+. .+||.++++++++..||+|++|..++
T Consensus 104 ~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~-~~Fd~i~~~~~~~~~KP~p~~~~~a~ 180 (250)
T 4gib_A 104 YYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGIS-DKFDFIADAGKCKNNKPHPEIFLMSA 180 (250)
T ss_dssp HHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCG-GGCSEECCGGGCCSCTTSSHHHHHHH
T ss_pred HHHHHHhhccccccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccc-cccceeecccccCCCCCcHHHHHHHH
Confidence 44444444334468999999999999999999987775 3456789999996 99999999999999999999999999
Q ss_pred HHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 233 KILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 233 ~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
+++|++|++|+||||+.+|+++|+++||++|+|.+. +.+ ..||++++++.||.+..|.+..
T Consensus 181 ~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~---~~~--~~ad~vi~~l~eL~~~~i~~~~ 241 (250)
T 4gib_A 181 KGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNY---ENL--KKANLVVDSTNQLKFEYIQEKY 241 (250)
T ss_dssp HHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCT---TTT--TTSSEEESSGGGCCHHHHHHHH
T ss_pred HHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECCh---hHh--ccCCEEECChHhCCHHHHHHHH
Confidence 999999999999999999999999999999999643 222 3689999999999876665543
No 10
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=99.93 E-value=1.8e-25 Score=240.56 Aligned_cols=217 Identities=23% Similarity=0.356 Sum_probs=183.8
Q ss_pred CCCCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHH
Q 001380 74 SKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEI 153 (1089)
Q Consensus 74 ~~~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1089)
....++|+|+||+||||+++...+..++.++++++|.....+.+....+.........+..... ...........+.+.
T Consensus 14 ~~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 92 (237)
T 4ex6_A 14 APAAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPV-EDPRVAEATEEYGRR 92 (237)
T ss_dssp ---CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCT-TSHHHHHHHHHHHHH
T ss_pred CCcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCC-CHHHHHHHHHHHHHH
Confidence 3456799999999999999999999999999999997788888888888888877776654332 121334444555555
Q ss_pred HHHHhc--CCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHH
Q 001380 154 YLDKYA--KPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSA 231 (1089)
Q Consensus 154 ~~~~~~--~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~ 231 (1089)
+.+.+. .. ..++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.+++++++..+||++++|+.+
T Consensus 93 ~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~ 169 (237)
T 4ex6_A 93 FGAHVRAAGP--RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLD-TRLTVIAGDDSVERGKPHPDMALHV 169 (237)
T ss_dssp HHHHHHHHGG--GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGG-GTCSEEECTTTSSSCTTSSHHHHHH
T ss_pred HHHhcccccC--CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCch-hheeeEEeCCCCCCCCCCHHHHHHH
Confidence 555443 22 278999999999999999999999999999999999999996 9999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 232 SKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 232 l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
++++|++|++|+||||+.+|+.+|+++|+.+++|.+|. ..+++.+..|++++.++.+| .++|.
T Consensus 170 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el--~~~l~ 233 (237)
T 4ex6_A 170 ARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAA--VTAVL 233 (237)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHH--HHHHH
T ss_pred HHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHH--HHHHH
Confidence 99999999999999999999999999999999999986 66778878999999999988 55654
No 11
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=99.93 E-value=2.7e-25 Score=240.11 Aligned_cols=208 Identities=27% Similarity=0.372 Sum_probs=169.3
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCC--CCHHhHhhhcCCCHHHHHHHHHhhc-----------C------C
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE--VTVEDFLPFMGTGEANFLGGVASVK-----------G------V 138 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----------~------~ 138 (1089)
++|+|+||+||||+|+...+..++.++++++|+. .+.+.+..+.+.+.......+.... + .
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 4799999999999999999999999999999987 6777788888887666555543100 0 0
Q ss_pred CCCCHH---HHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEc
Q 001380 139 KGFDSE---AAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSA 215 (1089)
Q Consensus 139 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~ 215 (1089)
.....+ +..+.+.+.|...... ...++||+.++|+.|+++|++++|+||.....++..++++|+ . +|+.++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l-~-~f~~~~~~ 158 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQI--KTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP-G-SFDFALGE 158 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSS--SCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST-T-TCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhh--cCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC-c-ceeEEEec
Confidence 011211 2222333333332222 347899999999999999999999999999999999999998 4 89999999
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccC
Q 001380 216 DAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 216 ~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el 289 (1089)
+++...||+|++|.++++++|++|++|+||||+.+|+++|+++|+.+++|.+|. ..+++....|++++.++.++
T Consensus 159 ~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el 233 (240)
T 2hi0_A 159 KSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKL 233 (240)
T ss_dssp CTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHH
Confidence 999999999999999999999999999999999999999999999999999987 55666667899999999887
No 12
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=99.93 E-value=7.4e-25 Score=236.97 Aligned_cols=217 Identities=28% Similarity=0.344 Sum_probs=179.3
Q ss_pred CCCCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHh-hcCCCCCCHHHHHHHHHH
Q 001380 74 SKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVAS-VKGVKGFDSEAAKKRFFE 152 (1089)
Q Consensus 74 ~~~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 152 (1089)
.+++++|+|+||+||||+++...+..++.++++++|+....+.+....+.........+.. ..+... .. +....+.+
T Consensus 19 ~~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 96 (243)
T 3qxg_A 19 HMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEA-TQ-EEIESIYH 96 (243)
T ss_dssp ---CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCC-CH-HHHHHHHH
T ss_pred cccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCC-CH-HHHHHHHH
Confidence 3456789999999999999999999999999999999988888777777776655554443 244332 22 33334444
Q ss_pred HHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCc--cEEEEcCCccCCCCCHHHHHH
Q 001380 153 IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMF--DAIVSADAFENLKPAPDIFLS 230 (1089)
Q Consensus 153 ~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~f--d~i~~~~~~~~~KP~~~~~~~ 230 (1089)
.+.+.+.......++||+.++|+.|+++|++++|+||.....+...++. ++. .+| |.+++++++...||++++|+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~d~i~~~~~~~~~kp~~~~~~~ 174 (243)
T 3qxg_A 97 EKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP-GMFHKELMVTAFDVKYGKPNPEPYLM 174 (243)
T ss_dssp HHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST-TTCCGGGEECTTTCSSCTTSSHHHHH
T ss_pred HHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH-HhcCcceEEeHHhCCCCCCChHHHHH
Confidence 4444443333457899999999999999999999999998888999999 996 999 999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 231 ~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
+++++|++|++|++|||+.+|+++|+++|+.+++|.++. ..+++....|+++++++.+| .++|.
T Consensus 175 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el--~~~l~ 239 (243)
T 3qxg_A 175 ALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL--CDSWD 239 (243)
T ss_dssp HHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHH--HHHHH
T ss_pred HHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHH--HHHHH
Confidence 999999999999999999999999999999999999987 66777778999999999998 55554
No 13
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.93 E-value=4.6e-24 Score=249.14 Aligned_cols=259 Identities=20% Similarity=0.334 Sum_probs=193.4
Q ss_pred CCCCCCCCCCC------ccccCCcceeEEee-CCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccc
Q 001380 642 GEEGLRDGSFD------DATFNRPQGLAYNA-KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQL 714 (1089)
Q Consensus 642 g~~g~~dG~~~------~~~f~~P~gla~d~-~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~ 714 (1089)
+..++.||++. .+.|..|.+|++|| +++.|||++..+++|++||++++.++++...+.. .
T Consensus 118 g~~~~~dG~~~~~~~~~~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~-------------~ 184 (496)
T 3kya_A 118 DDQGWRDGPFDGPEGVKCCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTI-------------P 184 (496)
T ss_dssp SCCCCBCEESSSSTTTSCBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTS-------------S
T ss_pred CceeccCCcccccccccccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCcc-------------c
Confidence 45567899885 67888999999998 3556999999999999999999999999865431 2
Q ss_pred cCCceeEEE-------ecCCCEEEEEECCC------cEEEEEECCC-CeEEEEeCCCccccCCCCCCCCccccCCceEEE
Q 001380 715 LNSPWDVCY-------KPINEKVYIAMAGQ------HQIWEHSTVD-GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780 (1089)
Q Consensus 715 l~~P~~la~-------~~~g~~lyvad~~~------~~I~~~~~~~-g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav 780 (1089)
++.|++|++ +++|+.|||++..+ +.|..++... |... .. .++ ..-+.+.+|+|+++
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~---~~-----~~~--~~v~~~~~p~giav 254 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFD---DR-----SDI--QLIAAYKQCNGATI 254 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCS---TT-----SCE--EEEEEESCCCCEEE
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCcee---ec-----ccc--eeeccCCCceEEEE
Confidence 568999999 99998899999886 3477776433 2110 00 000 00124678999999
Q ss_pred cCCCCEEEEEeCCCCeEEEEEcC-------CCCeE-EEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EE
Q 001380 781 SPDFMEIYVADSESSSIRALNLK-------TGGSR-LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IY 851 (1089)
Q Consensus 781 ~~~g~~lyvad~~~~~I~~~~~~-------~~~~~-~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-ly 851 (1089)
++++++||++|..+++|++++++ ++... ............++..+. -..|.+|+++++|+ ||
T Consensus 255 dp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~---------~~~p~~ia~~p~G~~lY 325 (496)
T 3kya_A 255 HPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD---------PSWEFQIFIHPTGKYAY 325 (496)
T ss_dssp CTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS---------SSCCEEEEECTTSSEEE
T ss_pred cCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC---------CCCceEEEEcCCCCEEE
Confidence 99777999999999999999987 44430 000000000000111111 23689999999998 89
Q ss_pred EEeCCCCEEEEEeCC--CCeE---EEEecc-CCCCCCCCcccccccCCCc-eEEEc-------cCCcEEEEECCCCEEEE
Q 001380 852 VADSYNHKIKKLDPA--SNRV---STLAGI-GKAGFKDGAALAAQLSEPA-GIIEA-------QNGNLFIADTNNNIIRY 917 (1089)
Q Consensus 852 VaD~~n~~I~~~d~~--~~~v---~t~~g~-g~~g~~~g~~~~~~l~~P~-gi~vd-------~~G~lyVad~~n~~I~~ 917 (1089)
|+|+.+|+|++++.+ ++.+ ++++|. |..|+.+|.+..++|+.|. |++++ .+|+|||||+.||||++
T Consensus 326 vaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~ 405 (496)
T 3kya_A 326 FGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRK 405 (496)
T ss_dssp EEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEE
T ss_pred EEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEE
Confidence 999999999997654 4444 688887 7888989999999999999 88997 67899999999999999
Q ss_pred EeCCCCCceEEEEeeccc
Q 001380 918 LDLNKEEPELQTLELKGV 935 (1089)
Q Consensus 918 ~~~~~~~~~~~~l~~~~~ 935 (1089)
|++++ .++++.+.|.
T Consensus 406 i~~~G---~v~TiaG~g~ 420 (496)
T 3kya_A 406 VTPEG---IVSTYAGRGA 420 (496)
T ss_dssp ECTTC---BEEEEEESCT
T ss_pred EeCCC---CEEEEecccc
Confidence 99766 4888987653
No 14
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=99.92 E-value=6.3e-25 Score=234.29 Aligned_cols=212 Identities=22% Similarity=0.268 Sum_probs=176.7
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCC-CHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEV-TVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
|+|+|+||+||||+++...+..++.++++++|... ..+.+....+........... ++. . .....+.+.+.+
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~---~-~~~~~~~~~~~~ 75 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY---NFD---E-ETATVAIDYYRD 75 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH---CCC---H-HHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh---CCC---H-HHHHHHHHHHHH
Confidence 58999999999999999999999999999999884 456777778877666554443 322 1 222333333333
Q ss_pred HhcCC--CCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHH
Q 001380 157 KYAKP--NSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKI 234 (1089)
Q Consensus 157 ~~~~~--~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~ 234 (1089)
.+... ....++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++...+||++.+|+.++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 154 (226)
T 3mc1_A 76 YFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLA-FYFDAIVGSSLDGKLSTKEDVIRYAMES 154 (226)
T ss_dssp HHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEECTTSSSCSHHHHHHHHHHH
T ss_pred HHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCH-hheeeeeccCCCCCCCCCHHHHHHHHHH
Confidence 33321 12478999999999999999999999999999999999999996 9999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCCHHHHHhccC
Q 001380 235 LNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVSLNDILTGGG 299 (1089)
Q Consensus 235 lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~i~~ll~~~~ 299 (1089)
+|++|++|++|||+.+|+.+|+++|+.+++|.+|. ..+.+.+..|++++.++.+| .+++....
T Consensus 155 lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el--~~~~~~~~ 218 (226)
T 3mc1_A 155 LNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDEL--HKKILELR 218 (226)
T ss_dssp HTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHH--HHHHHTC-
T ss_pred hCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHH--HHHHHHHh
Confidence 99999999999999999999999999999999987 66676677999999999998 77776653
No 15
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=99.92 E-value=1.8e-24 Score=231.68 Aligned_cols=217 Identities=23% Similarity=0.297 Sum_probs=181.8
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
+++|+|+||+||||+++...+..++.++++++|+......+....+.........+....+... .. .....+.+.+.+
T Consensus 4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 81 (233)
T 3s6j_A 4 RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSI-TD-EQAERLSEKHAQ 81 (233)
T ss_dssp -CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC----C-CH-HHHHHHHHHHHH
T ss_pred CcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCCC-CH-HHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999888888888888887777776655432 22 222333333332
Q ss_pred HhcC-CCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHc
Q 001380 157 KYAK-PNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKIL 235 (1089)
Q Consensus 157 ~~~~-~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~l 235 (1089)
.+.. .....++||+.++|+.|++.|++++|+||.....++..++.+|+. .+|+.++++++....||++.+|+.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~l 160 (233)
T 3s6j_A 82 AYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD-INKINIVTRDDVSYGKPDPDLFLAAAKKI 160 (233)
T ss_dssp HHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC-TTSSCEECGGGSSCCTTSTHHHHHHHHHT
T ss_pred HHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh-hhhheeeccccCCCCCCChHHHHHHHHHh
Confidence 2211 112378999999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred CCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 236 NVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 236 gv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
|+++++|++|||+.+|+.+|+++|+.+++|.+|. ..+++.+.+|++++.++.+| .++|...
T Consensus 161 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el--~~~l~~~ 222 (233)
T 3s6j_A 161 GAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDL--LNHLDEI 222 (233)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHH--HHTGGGT
T ss_pred CCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHH--HHHHHHH
Confidence 9999999999999999999999999999999985 78888888899999999998 6666554
No 16
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=99.92 E-value=2.8e-24 Score=232.57 Aligned_cols=215 Identities=27% Similarity=0.365 Sum_probs=177.5
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV-KGVKGFDSEAAKKRFFEIYL 155 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 155 (1089)
+++|+|+||+||||+++...+..++.++++++|+....+.+....+.........+... .+... . .+....+.+.+.
T Consensus 21 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ 98 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDA-T-EEEIKAIYQAKT 98 (247)
T ss_dssp CCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCC-C-HHHHHHHHHHHH
T ss_pred CCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCC-C-HHHHHHHHHHHH
Confidence 46899999999999999999999999999999999888887777777766655544432 44321 2 333344444444
Q ss_pred HHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCc--cEEEEcCCccCCCCCHHHHHHHHH
Q 001380 156 DKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMF--DAIVSADAFENLKPAPDIFLSASK 233 (1089)
Q Consensus 156 ~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~f--d~i~~~~~~~~~KP~~~~~~~~l~ 233 (1089)
..+.......++||+.++|+.|+++|++++|+||.....+...++. ++. .+| +.+++++++..+||++++|+.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~~~~~~~~~~~~~kp~~~~~~~~~~ 176 (247)
T 3dv9_A 99 EEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP-GIFQANLMVTAFDVKYGKPNPEPYLMALK 176 (247)
T ss_dssp HHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST-TTCCGGGEECGGGCSSCTTSSHHHHHHHH
T ss_pred HHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH-HhcCCCeEEecccCCCCCCCCHHHHHHHH
Confidence 4444434458899999999999999999999999998888899999 996 999 999999999999999999999999
Q ss_pred HcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 234 ILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 234 ~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
++|++|++|++|||+.+|+.+|+++|+.+++|.+|. ..+.+.+..|+++++++.++ .++|..
T Consensus 177 ~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el--~~~l~~ 239 (247)
T 3dv9_A 177 KGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDF--NKNWET 239 (247)
T ss_dssp HHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHH--HHHHHH
T ss_pred HcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHH--HHHHHH
Confidence 999999999999999999999999999999999987 66777778999999999998 555543
No 17
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=99.92 E-value=3.2e-24 Score=226.35 Aligned_cols=211 Identities=29% Similarity=0.330 Sum_probs=182.6
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHh
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDKY 158 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (1089)
+|+|+||+||||+++...+..++.++++++|...+.+.+....+.........+....+... ........+.+.+.+.+
T Consensus 1 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (216)
T 2pib_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKD-SLENFKKRVHEEKKRVF 79 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCS-CHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCchHHHHHHHHHHHHHcCCCCCHHHHHHHcCCChHHHHHHHHHHcCCCC-CHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999998999988888887777666543 44454444555554444
Q ss_pred cCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCC
Q 001380 159 AKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVP 238 (1089)
Q Consensus 159 ~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~ 238 (1089)
... ..++||+.++|+.|+++|++++|+||+....++..++.+|+. .+|+.++++++....||++++|+.+++++|++
T Consensus 80 ~~~--~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 156 (216)
T 2pib_A 80 SEL--LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE-KYFDVMVFGDQVKNGKPDPEIYLLVLERLNVV 156 (216)
T ss_dssp HHH--CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECGGGSSSCTTSTHHHHHHHHHHTCC
T ss_pred Hhc--CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChH-HhcCEEeecccCCCCCcCcHHHHHHHHHcCCC
Confidence 332 278999999999999999999999999999999999999996 99999999999999999999999999999999
Q ss_pred CCcEEEEcCChhhHHHHHHcCCeEE--EEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 239 TSECIVIEDALAGVQAAKAAQMRCI--AVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 239 p~~~v~VGD~~~Di~aA~~aG~~~i--~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
|++|+||||+.+|+++|+++|+.++ +|.++....+.. ..|++++.++.|+ .++|.
T Consensus 157 ~~~~i~iGD~~~Di~~a~~aG~~~i~~~v~~~~~~~~~~-~~a~~~~~~~~el--~~~l~ 213 (216)
T 2pib_A 157 PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALL-EAGAVALVKPEEI--LNVLK 213 (216)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCCEEEEECCSSSCCHHHH-HTTCSEEECGGGH--HHHHH
T ss_pred CceEEEEeCcHHHHHHHHHcCCcEEehccCCCCCchhhc-chhheeeCCHHHH--HHHHH
Confidence 9999999999999999999999999 999987433333 4899999999998 55554
No 18
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=99.92 E-value=2.8e-24 Score=231.81 Aligned_cols=206 Identities=18% Similarity=0.249 Sum_probs=174.1
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDK 157 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1089)
|+|+|+||+||||+++...+..++.++++++|.....+.+....+.......... .++...........+.+.+.+.
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 104 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY---YKFEDKKAKEAVEKYREYFADK 104 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHT
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999777788888887766554433 2332212233333444444433
Q ss_pred hcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCC
Q 001380 158 YAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237 (1089)
Q Consensus 158 ~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv 237 (1089)
... ...++||+.++|+.|+++|++++|+||+....++..++.+|+. .+|+.++++++....||++.+|..+++++|+
T Consensus 105 ~~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~ 181 (240)
T 3sd7_A 105 GIF--ENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID-RYFKYIAGSNLDGTRVNKNEVIQYVLDLCNV 181 (240)
T ss_dssp GGG--CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEECTTSCCCCHHHHHHHHHHHHTC
T ss_pred ccc--ccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH-hhEEEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence 222 2378999999999999999999999999999999999999996 9999999999999999999999999999999
Q ss_pred C-CCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccC
Q 001380 238 P-TSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 238 ~-p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el 289 (1089)
+ +++|++|||+.+|+++|+++|+.+++|.+|. ..+.+.+..|++++.++.|+
T Consensus 182 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el 235 (240)
T 3sd7_A 182 KDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI 235 (240)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred CCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence 9 9999999999999999999999999999987 66677678999999999998
No 19
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.92 E-value=1.3e-22 Score=224.75 Aligned_cols=253 Identities=18% Similarity=0.338 Sum_probs=201.7
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEe-eCCCEEEEEE
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN-AKKNLLYVAD 675 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d-~~g~~lyVaD 675 (1089)
...+..|.++++++ +|+|||++..+++|.+++.+|+.+..++..+. ....+..|.+++++ ++|+ +||++
T Consensus 26 ~g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~--------~~~~~~~p~~i~~~~~~g~-l~v~~ 95 (286)
T 1q7f_A 26 EGQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGK--------RDSQLLYPNRVAVVRNSGD-IIVTE 95 (286)
T ss_dssp TTCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEEEEECCBSS--------STTCBSSEEEEEEETTTTE-EEEEE
T ss_pred CCccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcEEEEecccCC--------CcccccCceEEEEEcCCCe-EEEEc
Confidence 46788999999997 78999999999999999999998887764321 13356789999995 5555 99999
Q ss_pred CC-CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEe
Q 001380 676 TE-NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFS 754 (1089)
Q Consensus 676 ~~-n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~ 754 (1089)
.. ++.|++++.++..+.++.. + .+..|++|+++++| .+||++.++++|+++++.+..+..+.
T Consensus 96 ~~~~~~i~~~d~~g~~~~~~~~-~---------------~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~ 158 (286)
T 1q7f_A 96 RSPTHQIQIYNQYGQFVRKFGA-T---------------ILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGNVLHKFG 158 (286)
T ss_dssp CGGGCEEEEECTTSCEEEEECT-T---------------TCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEECCCCcEEEEecC-c---------------cCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCCEEEEeC
Confidence 75 8899999977666666632 1 14579999999988 79999999999999998766666664
Q ss_pred CCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccc
Q 001380 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834 (1089)
Q Consensus 755 g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~ 834 (1089)
.. ..+..|.+|+++++| ++||++..+++|+++++++..+..+... .
T Consensus 159 ~~-------------~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~--------------------g 204 (286)
T 1q7f_A 159 CS-------------KHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEGQYLRQIGGE--------------------G 204 (286)
T ss_dssp CT-------------TTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTCCEEEEESCT--------------------T
T ss_pred CC-------------CccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCCCEEEEEccC--------------------C
Confidence 21 234579999999998 8999999999999999875444433210 1
Q ss_pred cccCceEEEEccCCcEEEEeCCCC-EEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCC
Q 001380 835 LLQHPLGVYCAKNGQIYVADSYNH-KIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN 913 (1089)
Q Consensus 835 ~l~~P~gva~~~~G~lyVaD~~n~-~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~ 913 (1089)
.+..|.+|++|++|++||++..++ +|.++|+++..+.++.... ....|.+++++++|+|||++. ++
T Consensus 205 ~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~------------~~~~~~~i~~~~~g~l~vs~~-~~ 271 (286)
T 1q7f_A 205 ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV------------KHAQCFDVALMDDGSVVLASK-DY 271 (286)
T ss_dssp TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS------------CCSCEEEEEEETTTEEEEEET-TT
T ss_pred ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC------------CCCcceeEEECCCCcEEEECC-CC
Confidence 256899999999999999999886 9999999888887776421 234689999999999999985 79
Q ss_pred EEEEEeCCCC
Q 001380 914 IIRYLDLNKE 923 (1089)
Q Consensus 914 ~I~~~~~~~~ 923 (1089)
+|++++....
T Consensus 272 ~v~v~~~~~~ 281 (286)
T 1q7f_A 272 RLYIYRYVQL 281 (286)
T ss_dssp EEEEEECSCC
T ss_pred eEEEEEcccc
Confidence 9999987653
No 20
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=99.92 E-value=3.7e-24 Score=232.49 Aligned_cols=209 Identities=24% Similarity=0.318 Sum_probs=181.7
Q ss_pred CCCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 001380 75 KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIY 154 (1089)
Q Consensus 75 ~~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (1089)
+++++|+|+||+||||+++...+..++.++++++|+....+.+..+.+.........+....+... ........+.+.+
T Consensus 26 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 104 (250)
T 3l5k_A 26 PPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPM-SKEELVEESQTKL 104 (250)
T ss_dssp CCCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCSS-CHHHHHHHHHHHH
T ss_pred cccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999998888888899988888888877777643 5666666666666
Q ss_pred HHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHH-CCCCCCCccEEEEcC--CccCCCCCHHHHHHH
Q 001380 155 LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAA-AGLPVSMFDAIVSAD--AFENLKPAPDIFLSA 231 (1089)
Q Consensus 155 ~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~-~gl~~~~fd~i~~~~--~~~~~KP~~~~~~~~ 231 (1089)
.+.+.. ..++||+.++|+.|+++|++++|+||.....+...+.+ +++. .+|+.+++++ ++...||++++|+.+
T Consensus 105 ~~~~~~---~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f~~~~~~~~~~~~~~Kp~~~~~~~~ 180 (250)
T 3l5k_A 105 KEVFPT---AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLFSHIVLGDDPEVQHGKPDPDIFLAC 180 (250)
T ss_dssp HHHGGG---CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTSSCEECTTCTTCCSCTTSTHHHHHH
T ss_pred HHHhcc---CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hheeeEEecchhhccCCCCChHHHHHH
Confidence 655533 37899999999999999999999999988888777755 4785 8999999999 899999999999999
Q ss_pred HHHcCCCC--CcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 232 SKILNVPT--SECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 232 l~~lgv~p--~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
++++|+++ ++|++|||+.+|+++|+++|+.+++|.++...++ ....|++++.++.|+
T Consensus 181 ~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~-~~~~ad~v~~sl~el 239 (250)
T 3l5k_A 181 AKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRD-LTTKATLVLNSLQDF 239 (250)
T ss_dssp HHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGG-GSTTSSEECSCGGGC
T ss_pred HHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchh-hcccccEeecCHHHh
Confidence 99999998 9999999999999999999999999999874444 456899999999999
No 21
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=99.92 E-value=2.5e-24 Score=229.61 Aligned_cols=209 Identities=23% Similarity=0.309 Sum_probs=173.5
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCC-CCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE-VTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+|+...+..++.++++++|+. .+.+.+....+.+.......+.... ...+....+.+.+.+
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 76 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLKDK-----FREEYVEVFRKHYLE 76 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHGGG-----CCTHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhChH-----HHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999987 5556677777877776666554311 223444555555544
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcC
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILN 236 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lg 236 (1089)
.... ...++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.+++++++...||++++|..+++++|
T Consensus 77 ~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~ 153 (222)
T 2nyv_A 77 NPVV--YTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS-GYFDLIVGGDTFGEKKPSPTPVLKTLEILG 153 (222)
T ss_dssp CSCS--SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECTTSSCTTCCTTHHHHHHHHHHT
T ss_pred hccc--cCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH-HHheEEEecCcCCCCCCChHHHHHHHHHhC
Confidence 3222 3478999999999999999999999999999999999999996 999999999999999999999999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 237 VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 237 v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
+++++|+||||+.+|+.+|+++|+.+++|.+|....+. ..|++++.++.++ .+++...
T Consensus 154 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~--~~~~~~~~~~~el--~~~l~~~ 211 (222)
T 2nyv_A 154 EEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS--QIPDFTLSRPSDL--VKLMDNH 211 (222)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC--CCCSEEESSTTHH--HHHHHTT
T ss_pred CCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc--cCCCEEECCHHHH--HHHHHHh
Confidence 99999999999999999999999999999987632222 6799999999988 5666443
No 22
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.91 E-value=1e-22 Score=237.71 Aligned_cols=260 Identities=18% Similarity=0.223 Sum_probs=205.4
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCC
Q 001380 625 IVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDY 704 (1089)
Q Consensus 625 I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~ 704 (1089)
.+.+...+.+.+..|..+..+..||.+.++.|+.|.+|+++++|+ |||+|..+++|+++|++++.+.++.+.+
T Consensus 99 ~F~y~~~~~v~tv~G~~~~~~~~dG~~~~a~~~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~~------ 171 (409)
T 3hrp_A 99 TFKYEQAQNVSTISGSASKDGNDDGDLASAKFKYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHPGF------ 171 (409)
T ss_dssp CEEECCCEEEEEEEECTTCCSCCCBSTTTCCCCCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEETC------
T ss_pred eEEEecccEEEEeecccCCCccCCCcHHHcccCCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEeeccC------
Confidence 445555666666777777788889999999999999999999988 9999999999999999999999987542
Q ss_pred CCCCcccccccCCceeEEEecCCCEEEEEECCCc-EEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCC
Q 001380 705 QGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH-QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPD 783 (1089)
Q Consensus 705 ~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~-~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~ 783 (1089)
..|+ ++++++++.||+++...+ +|+.++..++......+.- ....+..|++++++++
T Consensus 172 -----------~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~----------~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 172 -----------KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL----------GSTFSGKIGAVALDET 229 (409)
T ss_dssp -----------CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC----------CTTSCSCCCBCEECTT
T ss_pred -----------CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec----------cchhcCCcEEEEEeCC
Confidence 2577 999999999999998654 9999998766532221110 0113568999999996
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCce-EEEEcc-CCcEEEEeCCCCEEE
Q 001380 784 FMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL-GVYCAK-NGQIYVADSYNHKIK 861 (1089)
Q Consensus 784 g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~-gva~~~-~G~lyVaD~~n~~I~ 861 (1089)
+++||+++. +++|++++++++....+.+.. ..+.. -..|. ++++++ +|+|||+|..+++|+
T Consensus 230 ~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~--------~~g~~--------~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 230 EEWLYFVDS-NKNFGRFNVKTQEVTLIKQLE--------LSGSL--------GTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp SSEEEEECT-TCEEEEEETTTCCEEEEEECC--------CCSCC--------CCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCeEEEEEC-CCcEEEEECCCCCEEEEeccc--------ccCCC--------CCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 559999886 789999999877766554321 01100 12377 999999 589999999999999
Q ss_pred EEeCCCCeEEEEeccC-CCCCCCCcccccccCCCceEEEccCCcEEEEEC-CCCEEEEEeCCCCCceEEEEeec
Q 001380 862 KLDPASNRVSTLAGIG-KAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT-NNNIIRYLDLNKEEPELQTLELK 933 (1089)
Q Consensus 862 ~~d~~~~~v~t~~g~g-~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~-~n~~I~~~~~~~~~~~~~~l~~~ 933 (1089)
++++++. +.+++|.+ ..|+.+|.+..++|+.|.||+++++|+|||+|+ .+|+|+++++... .+.++.+.
T Consensus 293 ~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G--~v~~~~g~ 363 (409)
T 3hrp_A 293 KITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG--YVSTVAGQ 363 (409)
T ss_dssp EECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT--EEEEEEEC
T ss_pred EEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC--EEEEEeCC
Confidence 9998755 77777765 667788877888999999999999999999999 9999999996555 57777754
No 23
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=99.91 E-value=8.1e-24 Score=229.05 Aligned_cols=211 Identities=16% Similarity=0.274 Sum_probs=171.7
Q ss_pred CCCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCC-CCHHhHhhhcCCCHHHHHHHHHhhc----CCCCCCH---HHH
Q 001380 75 KWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE-VTVEDFLPFMGTGEANFLGGVASVK----GVKGFDS---EAA 146 (1089)
Q Consensus 75 ~~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~ 146 (1089)
...++|+|+||+||||+|+...+..++.++++++|+. .+.+.+..+.+.+...+........ +.. ... ...
T Consensus 19 ~~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 97 (243)
T 2hsz_A 19 GMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKE-LTEDEFKYF 97 (243)
T ss_dssp CCSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCC-CCHHHHHHH
T ss_pred CCccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhcccccc-CCHHHHHHH
Confidence 3456899999999999999999999999999999987 4556666777777665554443221 111 122 223
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHH
Q 001380 147 KKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPD 226 (1089)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~ 226 (1089)
.+.+.+.|...+... ..++||+.++|+.|+++|++++|+||.....++..++++|+. .+|+.++++++....||+++
T Consensus 98 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~ 174 (243)
T 2hsz_A 98 KRQFGFYYGENLCNI--SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID-HLFSEMLGGQSLPEIKPHPA 174 (243)
T ss_dssp HHHHHHHHHHHTTSS--CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECTTTSSSCTTSSH
T ss_pred HHHHHHHHHHhcccc--CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch-heEEEEEecccCCCCCcCHH
Confidence 334444454443333 378999999999999999999999999999999999999996 99999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCC-HHHHhhcCCcEEecCcccC
Q 001380 227 IFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLS-EERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 227 ~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~-~~~l~~~~~d~vi~dl~el 289 (1089)
+|..+++++|+++++|+||||+.+|+.+|+++|+.+++|.+|.. ...+....|++++.++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el 238 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 238 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHH
Confidence 99999999999999999999999999999999999999999763 4455567899999999887
No 24
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.91 E-value=1.1e-22 Score=248.53 Aligned_cols=283 Identities=23% Similarity=0.288 Sum_probs=209.9
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~ 676 (1089)
.+++..|.|||+|+.+++|||+|..+++|.+++.+|+..+++... .+..|.+|++||.++.|||+|.
T Consensus 80 ~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~-------------~l~~P~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 80 VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ-------------ELDQPRAIALDPSSGFMYWTDW 146 (619)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-------------SCSCCCCEEEETTTTEEEEEEC
T ss_pred eCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeC-------------CCCCCceEEEecCCCeEEEecc
Confidence 456789999999998999999999999999999999876655432 2678999999998777999998
Q ss_pred C-CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeC
Q 001380 677 E-NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG 755 (1089)
Q Consensus 677 ~-n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g 755 (1089)
+ +++|.++++++...+++... .+.+|.||++|+.++.|||+|.++++|++++.++.....+..
T Consensus 147 g~~~~I~r~~~dG~~~~~l~~~----------------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~ 210 (619)
T 3s94_A 147 GEVPKIERAGMDGSSRFIIINS----------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK 210 (619)
T ss_dssp SSSCEEEEEETTSCSCEEEECS----------------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----
T ss_pred CCCCEEEEEECCCCceEEEEeC----------------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe
Confidence 7 67999999988777777532 256899999999888999999999999999998766555431
Q ss_pred CCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCe-EEEecCC--C---------CCC--CCc
Q 001380 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS-RLLAGGD--P---------IFP--DNL 821 (1089)
Q Consensus 756 ~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~-~~~~g~~--~---------~~~--~~l 821 (1089)
..+.+|.||+++.+ .|||+|..+++|.+++..++.. ..+..+. | ..+ .+.
T Consensus 211 --------------~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~ 274 (619)
T 3s94_A 211 --------------GSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNP 274 (619)
T ss_dssp -------------------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCT
T ss_pred --------------CCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCcccc
Confidence 23568999999865 9999999999999999876643 2222210 0 000 000
Q ss_pred --------------------cc----cCC---CCC--------------------------cc-c-----cccccCceEE
Q 001380 822 --------------------FK----FGD---RDG--------------------------MG-S-----EVLLQHPLGV 842 (1089)
Q Consensus 822 --------------------~~----~g~---~dg--------------------------~~-~-----~~~l~~P~gv 842 (1089)
+. .|. .|+ .. . -..+.+|.+|
T Consensus 275 C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~l 354 (619)
T 3s94_A 275 CGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAI 354 (619)
T ss_dssp TTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEE
T ss_pred ccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEE
Confidence 00 000 010 00 0 0236678999
Q ss_pred EEcc-CCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEcc-CCcEEEEECCCCEEEEEeC
Q 001380 843 YCAK-NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ-NGNLFIADTNNNIIRYLDL 920 (1089)
Q Consensus 843 a~~~-~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~-~G~lyVad~~n~~I~~~~~ 920 (1089)
++|+ +|.|||+|..+++|+++++++....++... .+..|.|||+|+ .++||++|..+++|.++++
T Consensus 355 d~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~-------------~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~ 421 (619)
T 3s94_A 355 DYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA-------------QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRL 421 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC-------------CCCCcCceEEecccCcEEEEeCCCCcEEEEeC
Confidence 9997 679999999999999999988766666532 467899999996 6789999999999999999
Q ss_pred CCCCceEEEEeecccCCCC
Q 001380 921 NKEEPELQTLELKGVQPPT 939 (1089)
Q Consensus 921 ~~~~~~~~~l~~~~~~~p~ 939 (1089)
++. ..+++...++..|.
T Consensus 422 ~G~--~~~~l~~~~l~~P~ 438 (619)
T 3s94_A 422 NGT--MRKILISEDLEEPR 438 (619)
T ss_dssp TSC--SCEEEECTTCCSEE
T ss_pred CCC--eEEEEEECCCCCee
Confidence 987 34555434444443
No 25
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=99.91 E-value=9e-24 Score=232.79 Aligned_cols=218 Identities=23% Similarity=0.293 Sum_probs=176.9
Q ss_pred CCCceEEEEecCCcccCCchHH-HHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHH----------HhhcCCCC--CC
Q 001380 76 WGKVSAVLFDMDGVLCNSEEPS-RRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGV----------ASVKGVKG--FD 142 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d~~~~~-~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~--~~ 142 (1089)
++++|+|+||+||||+++.... ..++.++++++|+....+.+..+.+.......... ...++... ..
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEED 90 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHHH
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHHH
Confidence 4568999999999999987755 78999999999999888888888887655544333 22233221 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCC-ccEEEEcCCccCC
Q 001380 143 SEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSM-FDAIVSADAFENL 221 (1089)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~-fd~i~~~~~~~~~ 221 (1089)
.......+.+.+.+.+... ..++||+.++|+.|+++|++++|+||.....++..++.+++. .+ |+.++++++...+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~ 167 (277)
T 3iru_A 91 IKRLYDLFAPIQTRIVAQR--SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ-GYTPASTVFATDVVRG 167 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHT--CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT-TCCCSEEECGGGSSSC
T ss_pred HHHHHHHHHHHHHHHhhcc--CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc-cCCCceEecHHhcCCC
Confidence 2223333434444433332 378999999999999999999999999999999999999986 77 8999999999999
Q ss_pred CCCHHHHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCeEEEEcCCCC------------------------HHHHhh
Q 001380 222 KPAPDIFLSASKILNVPT-SECIVIEDALAGVQAAKAAQMRCIAVTTTLS------------------------EERLKE 276 (1089)
Q Consensus 222 KP~~~~~~~~l~~lgv~p-~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~------------------------~~~l~~ 276 (1089)
||++.+|+.+++++|+++ ++|+||||+.+|+++|+++|+.+++|.+|.. .+++.+
T Consensus 168 kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (277)
T 3iru_A 168 RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFN 247 (277)
T ss_dssp TTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhh
Confidence 999999999999999999 9999999999999999999999999999853 467777
Q ss_pred cCCcEEecCcccCCHHHHHhcc
Q 001380 277 ASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 277 ~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
.+|+++++++.+| .++|...
T Consensus 248 ~~ad~v~~~~~el--~~~l~~~ 267 (277)
T 3iru_A 248 AGAHYVIDSVADL--ETVITDV 267 (277)
T ss_dssp HTCSEEESSGGGT--HHHHHHH
T ss_pred CCCCEEecCHHHH--HHHHHHH
Confidence 8899999999999 6666543
No 26
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=99.91 E-value=3.9e-24 Score=225.31 Aligned_cols=207 Identities=26% Similarity=0.393 Sum_probs=175.4
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDK 157 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1089)
|+|+|+||+||||+++...+..++.++++++|.....+.+....+.....+...+....+... ........+.+.+.+.
T Consensus 4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 82 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKW-DVSTLQEEYNTYKQNN 82 (214)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGGS-CHHHHHHHHHHHHHHS
T ss_pred cccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999999888778888888887777777766554332 4455555555544433
Q ss_pred hcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCC
Q 001380 158 YAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237 (1089)
Q Consensus 158 ~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv 237 (1089)
.. .....++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++....||++++|+.+++++|+
T Consensus 83 ~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 160 (214)
T 3e58_A 83 PL-PYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ-GFFDIVLSGEEFKESKPNPEIYLTALKQLNV 160 (214)
T ss_dssp CC-CHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGCSSCTTSSHHHHHHHHHHTC
T ss_pred hc-ccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH-hheeeEeecccccCCCCChHHHHHHHHHcCC
Confidence 21 112257999999999999999999999999999999999999996 9999999999999999999999999999999
Q ss_pred CCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 238 PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 238 ~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
++++|++|||+.+|+.+|+++|+.++++.++..... ...|+++++++.++
T Consensus 161 ~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~--~~~a~~~~~~~~el 210 (214)
T 3e58_A 161 QASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMD--QSAAKGLLDSLTDV 210 (214)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCC--CTTSSEEESSGGGG
T ss_pred ChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccch--hccHHHHHHHHHHH
Confidence 999999999999999999999999999998642211 26899999999988
No 27
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=99.91 E-value=4.3e-24 Score=229.10 Aligned_cols=212 Identities=25% Similarity=0.350 Sum_probs=166.6
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCC-CCC---HHHHHHHHHHHH
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVK-GFD---SEAAKKRFFEIY 154 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ 154 (1089)
+|+|+||+||||+++...+..++.++++++|+..+.+.+..+.+.........+....+.. ... .......+.+.+
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRDY 81 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999888888899999888888777766541 112 223334444455
Q ss_pred HHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHH
Q 001380 155 LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKI 234 (1089)
Q Consensus 155 ~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~ 234 (1089)
.+.+.......++||+.++|+.|+++|++++|+||... ++..++.+|+. .+|+.+++++++..+||++++|+.++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 158 (233)
T 3nas_A 82 QMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAII-DDFHAIVDPTTLAKGKPDPDIFLTAAAM 158 (233)
T ss_dssp HHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCT-TTCSEECCC---------CCHHHHHHHH
T ss_pred HHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcH-hhcCEEeeHhhCCCCCCChHHHHHHHHH
Confidence 55444433234899999999999999999999999854 88899999996 9999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 235 LNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 235 lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
+|++|++|+||||+.+|+++|+++|+.++++++. +++. .|++++.++.++.+..++...
T Consensus 159 lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~---~~~~--~ad~v~~s~~el~~~~~~~~~ 217 (233)
T 3nas_A 159 LDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG---QPML--GADLVVRQTSDLTLELLHEEW 217 (233)
T ss_dssp HTSCGGGEEEEECSHHHHHHHHHTTCEEEECC------------CSEECSSGGGCCHHHHHHHH
T ss_pred cCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc---cccc--cCCEEeCChHhCCHHHHHHHH
Confidence 9999999999999999999999999999999653 3333 799999999999887777654
No 28
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.91 E-value=2.8e-22 Score=225.78 Aligned_cols=227 Identities=20% Similarity=0.254 Sum_probs=179.4
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCC----CEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDG----NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g----~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
..+..|.++++|+.+++|||+|..+++|.+++.+| .....+.. ..+..|.||++|+.++.|||
T Consensus 27 ~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~-------------~~~~~p~glavd~~~~~ly~ 93 (316)
T 1ijq_A 27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------------RDIQAPDGLAVDWIHSNIYW 93 (316)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-------------SSCSCCCEEEEETTTTEEEE
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe-------------CCCCCcCEEEEeecCCeEEE
Confidence 35788999999988899999999999999999987 33222221 12568999999987767999
Q ss_pred EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC-cEEEEEECCCCeEEE
Q 001380 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ-HQIWEHSTVDGVTRA 752 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~-~~I~~~~~~~g~~~~ 752 (1089)
+|..+++|.++++++...+++... .+..|.+|+++|.++.||+++.++ ++|+++++++...+.
T Consensus 94 ~d~~~~~I~~~~~~g~~~~~~~~~----------------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~ 157 (316)
T 1ijq_A 94 TDSVLGTVSVADTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 157 (316)
T ss_dssp EETTTTEEEEEETTSSSEEEEEEC----------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred EECCCCEEEEEeCCCCceEEEEEC----------------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE
Confidence 999999999999988777776531 145899999999888999999986 899999987766555
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
+.. ..+.+|+||++|+++++|||+|+.+++|.+++.+++..+++....
T Consensus 158 ~~~--------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~------------------ 205 (316)
T 1ijq_A 158 LVT--------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE------------------ 205 (316)
T ss_dssp EEC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECT------------------
T ss_pred EEE--------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecC------------------
Confidence 542 246689999999988899999999999999999876665554210
Q ss_pred cccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCC-eEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN-RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~-~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
..+.+|.||+++ +|++||+|+.+++|.++++.++ .+.++.. .+..|.||++..
T Consensus 206 -~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~--------------~~~~p~~i~v~~ 259 (316)
T 1ijq_A 206 -KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE--------------NLLSPEDMVLFH 259 (316)
T ss_dssp -TTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC--------------SCSCCCCEEEES
T ss_pred -CccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec--------------CCCCceEEEEec
Confidence 126799999997 5899999999999999998544 4555542 366799988764
No 29
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.91 E-value=4.6e-23 Score=241.83 Aligned_cols=238 Identities=18% Similarity=0.248 Sum_probs=187.8
Q ss_pred CCCCCCCCCCCCcc-ccCCcceeEEeeC--CCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCC
Q 001380 641 SGEEGLRDGSFDDA-TFNRPQGLAYNAK--KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNS 717 (1089)
Q Consensus 641 ~g~~g~~dG~~~~~-~f~~P~gla~d~~--g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~ 717 (1089)
.|..++.||.+.++ +|+.|.||+++++ ++.|||+|.. ++|++++++++.++++++ .+..
T Consensus 122 ~g~~~~~dG~~~~a~~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~-----------------~~~~ 183 (433)
T 4hw6_A 122 NTKWDVLAGPFDDCGAFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT-----------------NIGQ 183 (433)
T ss_dssp TTBCCCCCEETTSCCCCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC-----------------CCSC
T ss_pred CCCccccCCchHHhcccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec-----------------CCCC
Confidence 56888899998887 9999999999984 4459999988 999999999999999974 1458
Q ss_pred ceeEEEecCCCEEEEEECCCc----EEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC
Q 001380 718 PWDVCYKPINEKVYIAMAGQH----QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE 793 (1089)
Q Consensus 718 P~~la~~~~g~~lyvad~~~~----~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~ 793 (1089)
|.+|+++++|+ |||++.+++ .+..++..++.... .....+..|.|+++++++++|||+|..
T Consensus 184 P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~--------------~~~~~~~~P~giavd~~~G~lyv~d~~ 248 (433)
T 4hw6_A 184 CADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTER--------------LSLCNARGAKTCAVHPQNGKIYYTRYH 248 (433)
T ss_dssp EEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCE--------------EEEEECSSBCCCEECTTTCCEEECBTT
T ss_pred ccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecc--------------ccccccCCCCEEEEeCCCCeEEEEECC
Confidence 99999999996 999998652 34445433221100 001346789999999944599999999
Q ss_pred CCeEEEEEcCCCCe-EEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCC--CCe
Q 001380 794 SSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPA--SNR 869 (1089)
Q Consensus 794 ~~~I~~~~~~~~~~-~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~--~~~ 869 (1089)
+++|++++++++.+ ..+... +. ...+.+++++++|+ |||+|+.+|+|++++.+ ++.
T Consensus 249 ~~~V~~~d~~~g~~~~~~~~~-----------~~---------~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~ 308 (433)
T 4hw6_A 249 HAMISSYDPATGTLTEEEVMM-----------DT---------KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK 308 (433)
T ss_dssp CSEEEEECTTTCCEEEEEEEC-----------SC---------CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC
T ss_pred CCEEEEEECCCCeEEEEEecc-----------CC---------CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc
Confidence 99999999986665 333211 10 12467899999997 99999999999998865 343
Q ss_pred ---EEEEecc-CCCCCCCCcccccccCCCceEEE---------ccCCcEEEEECCCCEEEEEeCCCCCceEEEEeecc
Q 001380 870 ---VSTLAGI-GKAGFKDGAALAAQLSEPAGIIE---------AQNGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934 (1089)
Q Consensus 870 ---v~t~~g~-g~~g~~~g~~~~~~l~~P~gi~v---------d~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~~~~ 934 (1089)
..+++|. +..|+.+|.+..++|+.|.||++ +.+|+|||+|+.||+|+++++++ .+.++.+.+
T Consensus 309 ~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G---~v~t~~G~g 383 (433)
T 4hw6_A 309 LAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG---RVTTYAGRG 383 (433)
T ss_dssp BCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS---EEEEEECCC
T ss_pred cCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC---CEEEEEeCC
Confidence 3577776 77788888888999999999999 88999999999999999999866 477777554
No 30
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.91 E-value=1.6e-22 Score=222.00 Aligned_cols=228 Identities=18% Similarity=0.225 Sum_probs=179.9
Q ss_pred CCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCC
Q 001380 599 PLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTEN 678 (1089)
Q Consensus 599 ~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n 678 (1089)
+..+|.++++|+.+++|||+|..+++|.+++.+|.....+... .+..|.+|+++++++.|||+|..+
T Consensus 34 ~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-------------~~~~p~~ia~d~~~~~lyv~d~~~ 100 (267)
T 1npe_A 34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ-------------DLGSPEGIALDHLGRTIFWTDSQL 100 (267)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT-------------TCCCEEEEEEETTTTEEEEEETTT
T ss_pred CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC-------------CCCCccEEEEEecCCeEEEEECCC
Confidence 3467899999988899999999999999999998755444322 146899999999877799999999
Q ss_pred CEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC--CcEEEEEECCCCeEEEEeCC
Q 001380 679 HALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG--QHQIWEHSTVDGVTRAFSGD 756 (1089)
Q Consensus 679 ~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~--~~~I~~~~~~~g~~~~~~g~ 756 (1089)
++|.++++++...+.+...+ +..|.+++++++++.|||++.+ +++|++++.++.....+..
T Consensus 101 ~~I~~~~~~g~~~~~~~~~~----------------~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~- 163 (267)
T 1npe_A 101 DRIEVAKMDGTQRRVLFDTG----------------LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ- 163 (267)
T ss_dssp TEEEEEETTSCSCEEEECSS----------------CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC-
T ss_pred CEEEEEEcCCCCEEEEEECC----------------CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE-
Confidence 99999999876655554221 4589999999987899999987 6899999987655444431
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l 836 (1089)
..+..|+||++++++++|||+|..+++|++++++++....+.. .+
T Consensus 164 -------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~----------------------~~ 208 (267)
T 1npe_A 164 -------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE----------------------GL 208 (267)
T ss_dssp -------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE----------------------CC
T ss_pred -------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec----------------------CC
Confidence 2356899999999888999999999999999998644433321 14
Q ss_pred cCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc
Q 001380 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN 904 (1089)
Q Consensus 837 ~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~ 904 (1089)
.+|.|++++ +|++||+|..+++|.++|++++.+......+ ....|.||++.+++.
T Consensus 209 ~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g------------~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 209 QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPH------------KQTRLYGITIALSQC 263 (267)
T ss_dssp CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCS------------SCCCCCCEEEECSCC
T ss_pred CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccc------------cccccceeeecCccC
Confidence 689999998 7899999999999999999877654433222 234599999988764
No 31
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.91 E-value=2.8e-22 Score=228.92 Aligned_cols=237 Identities=17% Similarity=0.249 Sum_probs=190.7
Q ss_pred CCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeE
Q 001380 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v 691 (1089)
+..|++++. +.|.+++++|.....+... +.+|.||++++.++.|||+|..+++|++++++++.+
T Consensus 44 ~~~ll~~~~--~~I~~i~~~g~~~~~~~~~--------------~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 44 EPVLLFANR--IDIRQVLPHRSEYTLLLNN--------------LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 107 (349)
T ss_dssp CCEEEEECB--SCEEEECTTSCCEEEEECS--------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CceeEeecc--cceEEEeCCCCeeEEeecC--------------CCceEEEEEeccccEEEEEeccCCceEEEecCCCCc
Confidence 567888875 6799999998765544332 457999999987778999999999999999998877
Q ss_pred EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCcc
Q 001380 692 RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771 (1089)
Q Consensus 692 ~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~ 771 (1089)
+++...+ +..|.+|++++.++.||+++.++++|.++++++...+.+.. ..
T Consensus 108 ~~~~~~~----------------~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~--------------~~ 157 (349)
T 3v64_C 108 EEVVSTG----------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW--------------QS 157 (349)
T ss_dssp EEEECSS----------------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------------TT
T ss_pred eEEEeCC----------------CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe--------------CC
Confidence 7765332 45899999999888999999999999999988765555431 34
Q ss_pred ccCCceEEEcCCCCEEEEEeCCC-CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc-CCc
Q 001380 772 FAQPSGISLSPDFMEIYVADSES-SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK-NGQ 849 (1089)
Q Consensus 772 ~~~P~glav~~~g~~lyvad~~~-~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~-~G~ 849 (1089)
+..|.||+++|.++.||++|.++ ++|+++++++...+.+... .+..|.||++|+ +++
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---------------------~~~~PnGla~d~~~~~ 216 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---------------------HLFWPNGLTIDYAGRR 216 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS---------------------SCSCEEEEEEETTTTE
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---------------------CCCCcceEEEeCCCCE
Confidence 66899999999777999999998 9999999987655544221 267899999996 678
Q ss_pred EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeC-CCCCceEE
Q 001380 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL-NKEEPELQ 928 (1089)
Q Consensus 850 lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~-~~~~~~~~ 928 (1089)
|||+|+.+++|.++|.++....++... .+..|.||+++ +|+|||+|+.+++|.+++. .+. .+.
T Consensus 217 lY~aD~~~~~I~~~~~dG~~~~~~~~~-------------~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~--~~~ 280 (349)
T 3v64_C 217 MYWVDAKHHVIERANLDGSHRKAVISQ-------------GLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGK--NQE 280 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECS-------------SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC--SCE
T ss_pred EEEEECCCCEEEEEeCCCCceEEEEeC-------------CCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCC--ccE
Confidence 999999999999999987766665432 36789999996 6789999999999999994 454 345
Q ss_pred EEe
Q 001380 929 TLE 931 (1089)
Q Consensus 929 ~l~ 931 (1089)
++.
T Consensus 281 ~i~ 283 (349)
T 3v64_C 281 IIR 283 (349)
T ss_dssp EEE
T ss_pred Eec
Confidence 554
No 32
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.91 E-value=1.5e-22 Score=231.14 Aligned_cols=225 Identities=20% Similarity=0.291 Sum_probs=182.1
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
..+..|.++++|+.+++|||+|..+++|.+++++|.....+...+ +..|.||++|+.++.|||+|..
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~-------------~~~p~glavd~~~g~ly~~d~~ 136 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG-------------LESPGGLAVDWVHDKLYWTDSG 136 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-------------CSCCCEEEEETTTTEEEEEETT
T ss_pred cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC-------------CCCccEEEEecCCCeEEEEcCC
Confidence 456789999999889999999999999999999987655543321 4589999999877779999999
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC-cEEEEEECCCCeEEEEeCC
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ-HQIWEHSTVDGVTRAFSGD 756 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~-~~I~~~~~~~g~~~~~~g~ 756 (1089)
+++|.++++++...+++... .+..|.+|+++|.++.||++|.++ ++|++++.++...+.+..
T Consensus 137 ~~~I~~~~~dG~~~~~l~~~----------------~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~- 199 (349)
T 3v64_C 137 TSRIEVANLDGAHRKVLLWQ----------------SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD- 199 (349)
T ss_dssp TTEEEEEETTSCSCEEEECT----------------TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-
T ss_pred CCeEEEEcCCCCceEEEEeC----------------CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-
Confidence 99999999988766666421 156899999999888999999998 999999987655444431
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l 836 (1089)
..+.+|+||++|+++++|||+|+.+++|++++++++..+.+... .+
T Consensus 200 -------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~---------------------~~ 245 (349)
T 3v64_C 200 -------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ---------------------GL 245 (349)
T ss_dssp -------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------------------SC
T ss_pred -------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC---------------------CC
Confidence 34678999999988789999999999999999987655544321 16
Q ss_pred cCceEEEEccCCcEEEEeCCCCEEEEEeC-CCCeEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDP-ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 837 ~~P~gva~~~~G~lyVaD~~n~~I~~~d~-~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
.+|.||+++ +|.|||+|+.+++|.++++ .+..+.++.. .+..|.||++..
T Consensus 246 ~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~--------------~~~~p~gi~v~~ 296 (349)
T 3v64_C 246 PHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN--------------KLHFPMDIHTLH 296 (349)
T ss_dssp SSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC--------------SCSCCCCEEEEC
T ss_pred CCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEecc--------------CCCCCceEEEEc
Confidence 799999995 7899999999999999994 5555566642 467799988863
No 33
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.91 E-value=1.2e-22 Score=235.27 Aligned_cols=226 Identities=19% Similarity=0.291 Sum_probs=185.1
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~ 676 (1089)
...+..|.++++|+.+++|||+|..+++|.+++++|.....+...+ +..|.||++|+.++.|||+|.
T Consensus 112 ~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~-------------~~~p~glavd~~~g~lY~~d~ 178 (386)
T 3v65_B 112 LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG-------------LESPGGLAVDWVHDKLYWTDS 178 (386)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS-------------CSCCCCEEEETTTTEEEEEET
T ss_pred ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC-------------CCCccEEEEEeCCCeEEEEcC
Confidence 3567889999999889999999999999999999987665554321 458999999987777999999
Q ss_pred CCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC-cEEEEEECCCCeEEEEeC
Q 001380 677 ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ-HQIWEHSTVDGVTRAFSG 755 (1089)
Q Consensus 677 ~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~-~~I~~~~~~~g~~~~~~g 755 (1089)
.+++|.++++++...+++...+ +..|.+|+++|.++.||++|.+. ++|+++++++...+.+..
T Consensus 179 ~~~~I~~~~~dg~~~~~l~~~~----------------l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 179 GTSRIEVANLDGAHRKVLLWQS----------------LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp TTTEEEECBTTSCSCEEEECSS----------------CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred CCCeEEEEeCCCCceEEeecCC----------------CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 9999999999887766665321 56899999999888999999998 999999988766665542
Q ss_pred CCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcccccc
Q 001380 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835 (1089)
Q Consensus 756 ~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~ 835 (1089)
..+.+|+||++++++++|||+|+.+++|++++++++..+.+... .
T Consensus 243 --------------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~---------------------~ 287 (386)
T 3v65_B 243 --------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ---------------------G 287 (386)
T ss_dssp --------------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS---------------------S
T ss_pred --------------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC---------------------C
Confidence 33668999999987779999999999999999987655544321 1
Q ss_pred ccCceEEEEccCCcEEEEeCCCCEEEEEeC-CCCeEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDP-ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 836 l~~P~gva~~~~G~lyVaD~~n~~I~~~d~-~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
+.+|.||+++ ++.|||+|+.+++|.++++ .+..+.++.. .+..|.||++..
T Consensus 288 ~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~--------------~~~~p~gi~v~~ 339 (386)
T 3v65_B 288 LPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN--------------KLHFPMDIHTLH 339 (386)
T ss_dssp CSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC--------------SCSCCCCEEEES
T ss_pred CCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEcc--------------CCCCCceEEEEc
Confidence 6799999995 6799999999999999994 5556666653 467799998864
No 34
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=99.91 E-value=7.6e-24 Score=231.35 Aligned_cols=214 Identities=22% Similarity=0.293 Sum_probs=182.9
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHh-HhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVED-FLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYL 155 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (1089)
+++|+|+||+||||+++...+..++.++++++|+.....+ +..+.+.........+....+.... ......+.+.+.
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 103 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPP--PDFLDVLETRFN 103 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCC--TTHHHHHHHHHH
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCC--HHHHHHHHHHHH
Confidence 4689999999999999999999999999999999877654 4566788888888777766664431 233444555555
Q ss_pred HHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccE-EEEcCCcc-CCCCCHHHHHHHHH
Q 001380 156 DKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDA-IVSADAFE-NLKPAPDIFLSASK 233 (1089)
Q Consensus 156 ~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~-i~~~~~~~-~~KP~~~~~~~~l~ 233 (1089)
+.+ ....++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+. ++++++.. ..||++++|+.+++
T Consensus 104 ~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~ 179 (259)
T 4eek_A 104 AAM---TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT-ELAGEHIYDPSWVGGRGKPHPDLYTFAAQ 179 (259)
T ss_dssp HHH---TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH-HHHCSCEECGGGGTTCCTTSSHHHHHHHH
T ss_pred HHh---ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH-hhccceEEeHhhcCcCCCCChHHHHHHHH
Confidence 554 23478999999999999999999999999999999999999996 99999 99999999 99999999999999
Q ss_pred HcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-C----HHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 234 ILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-S----EERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 234 ~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~----~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
++|+++++|++|||+.+|+++|+++|+.+++|.+|. . .+++...+|++++.++.|| .++|...
T Consensus 180 ~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el--~~~l~~~ 247 (259)
T 4eek_A 180 QLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAEL--RAALAEA 247 (259)
T ss_dssp HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHH--HHHHHHT
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHH--HHHHHhc
Confidence 999999999999999999999999999999999874 3 6778888999999999998 6666543
No 35
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.91 E-value=2.7e-22 Score=232.36 Aligned_cols=237 Identities=17% Similarity=0.249 Sum_probs=191.7
Q ss_pred CCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeE
Q 001380 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v 691 (1089)
...|++++. ++|.++++++.....+... +..|.||++++.++.|||+|..+++|++++++++.+
T Consensus 87 ~~~l~~~~~--~~I~~i~~~~~~~~~~~~~--------------~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 150 (386)
T 3v65_B 87 EPVLLFANR--IDIRQVLPHRSEYTLLLNN--------------LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 150 (386)
T ss_dssp CCEEEEECB--SCEEEECTTSCCCEEEECS--------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE
T ss_pred cceeEeecC--ccceeeccCCCcEEEEecC--------------CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc
Confidence 567777765 6899999987655544332 458999999987778999999999999999998888
Q ss_pred EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCcc
Q 001380 692 RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771 (1089)
Q Consensus 692 ~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~ 771 (1089)
+++...+ +..|.+|++++.++.||+++.++++|+++++++...+.+.. ..
T Consensus 151 ~~~~~~~----------------~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~--------------~~ 200 (386)
T 3v65_B 151 EEVVSTG----------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW--------------QS 200 (386)
T ss_dssp EEEECSS----------------CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC--------------SS
T ss_pred EEEEeCC----------------CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec--------------CC
Confidence 7776433 45899999999888999999999999999988766555542 34
Q ss_pred ccCCceEEEcCCCCEEEEEeCCC-CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc-CCc
Q 001380 772 FAQPSGISLSPDFMEIYVADSES-SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK-NGQ 849 (1089)
Q Consensus 772 ~~~P~glav~~~g~~lyvad~~~-~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~-~G~ 849 (1089)
+..|.||+++|+++.|||+|.+. ++|+++++++...+.+... .+..|.||++|+ +++
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---------------------~~~~PnGlavd~~~~~ 259 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---------------------HLFWPNGLTIDYAGRR 259 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---------------------SCSCEEEEEEEGGGTE
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---------------------CCCCeeeEEEeCCCCE
Confidence 66899999999877999999998 9999999987666555321 166899999995 568
Q ss_pred EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeC-CCCCceEE
Q 001380 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL-NKEEPELQ 928 (1089)
Q Consensus 850 lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~-~~~~~~~~ 928 (1089)
|||+|+.+++|.++|.++....++... .+..|.||+++ ++.|||+|+.+++|.+++. .+. .+.
T Consensus 260 lY~aD~~~~~I~~~d~dG~~~~~~~~~-------------~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~--~~~ 323 (386)
T 3v65_B 260 MYWVDAKHHVIERANLDGSHRKAVISQ-------------GLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGK--NQE 323 (386)
T ss_dssp EEEEETTTTEEEEECTTSCSCEEEECS-------------SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC--SCE
T ss_pred EEEEECCCCEEEEEeCCCCeeEEEEEC-------------CCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCc--ceE
Confidence 999999999999999987766666532 36789999996 5789999999999999994 444 445
Q ss_pred EEe
Q 001380 929 TLE 931 (1089)
Q Consensus 929 ~l~ 931 (1089)
++.
T Consensus 324 ~i~ 326 (386)
T 3v65_B 324 IIR 326 (386)
T ss_dssp EEE
T ss_pred EEc
Confidence 554
No 36
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.91 E-value=7.7e-23 Score=224.10 Aligned_cols=240 Identities=19% Similarity=0.321 Sum_probs=186.7
Q ss_pred CCceEEEeecCCeEEE-EeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 602 FPGKLAIDILNNRLFI-SDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~v-sd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
.|.++++++ +|+||| ++..+++|.+++.++.....+... .+..|.+|+++++|+ |||++. ++.
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~-------------~~~~p~~i~~~~~g~-l~v~~~-~~~ 88 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFN-------------GLYQPQGLAVDGAGT-VYVTDF-NNR 88 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCC-------------SCCSCCCEEECTTCC-EEEEET-TTE
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeC-------------CcCCcceeEECCCCC-EEEEcC-CCE
Confidence 999999997 788999 999999999999876554433211 245899999999998 999998 889
Q ss_pred EEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccc
Q 001380 681 LREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER 760 (1089)
Q Consensus 681 I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~ 760 (1089)
|++++.+++.+..+... .+..|++|+++++| .+||++.++++|++++..+.......
T Consensus 89 i~~~d~~~~~~~~~~~~----------------~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~------ 145 (270)
T 1rwi_B 89 VVTLAAGSNNQTVLPFD----------------GLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLP------ 145 (270)
T ss_dssp EEEECTTCSCCEECCCC----------------SCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECC------
T ss_pred EEEEeCCCceEeeeecC----------------CcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeec------
Confidence 99999988766554321 13579999999987 69999999999999975443322211
Q ss_pred cCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCce
Q 001380 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840 (1089)
Q Consensus 761 ~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~ 840 (1089)
...+..|.+|+++++| +|||++..+++|++++++++....... ..+..|.
T Consensus 146 --------~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~---------------------~~~~~p~ 195 (270)
T 1rwi_B 146 --------FTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVVLPF---------------------TDITAPW 195 (270)
T ss_dssp --------CCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEEECCC---------------------SSCCSEE
T ss_pred --------cccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceEeecc---------------------cCCCCce
Confidence 1235579999999998 799999999999999988655432210 1146799
Q ss_pred EEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeC
Q 001380 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDL 920 (1089)
Q Consensus 841 gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~ 920 (1089)
+|+++++|++||++..+++|.++++++.....+.. ..+..|.+|+++++|+|||++..+++|+++++
T Consensus 196 ~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~-------------~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF-------------TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC-------------CSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred EEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc-------------CCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 99999999999999999999999998765544321 13577999999999999999999999999998
Q ss_pred CCC
Q 001380 921 NKE 923 (1089)
Q Consensus 921 ~~~ 923 (1089)
...
T Consensus 263 ~~~ 265 (270)
T 1rwi_B 263 LEH 265 (270)
T ss_dssp CGG
T ss_pred CCc
Confidence 765
No 37
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.91 E-value=4.8e-22 Score=218.23 Aligned_cols=242 Identities=19% Similarity=0.266 Sum_probs=184.7
Q ss_pred CeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEE
Q 001380 613 NRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692 (1089)
Q Consensus 613 g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~ 692 (1089)
..||+++. ++|.+++.+|.....+... . .......+|.|++++++++.|||+|..+++|.+++++++.+.
T Consensus 2 ~~l~~~~~--~~I~~~~~~g~~~~~~~~~--~------~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 71 (267)
T 1npe_A 2 THLLFAQT--GKIERLPLERNTMKKTEAK--A------FLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT 71 (267)
T ss_dssp EEEEEEEE--EEEEEEEESSSCBCGGGCE--E------EEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE
T ss_pred cEEEEEcC--CeEEEEEecCcccccccce--e------eecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE
Confidence 36889885 6899999987643211000 0 000113478999999988789999999999999999887766
Q ss_pred EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccc
Q 001380 693 TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSF 772 (1089)
Q Consensus 693 ~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~ 772 (1089)
.+...+ +..|.+|++++.++.|||++.++++|.+++.++.....+.. ..+
T Consensus 72 ~~~~~~----------------~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--------------~~~ 121 (267)
T 1npe_A 72 TIIRQD----------------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD--------------TGL 121 (267)
T ss_dssp EEECTT----------------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------------SSC
T ss_pred EEEECC----------------CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE--------------CCC
Confidence 654211 45899999999888999999999999999987655444432 234
Q ss_pred cCCceEEEcCCCCEEEEEeCC--CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccC-Cc
Q 001380 773 AQPSGISLSPDFMEIYVADSE--SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN-GQ 849 (1089)
Q Consensus 773 ~~P~glav~~~g~~lyvad~~--~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~-G~ 849 (1089)
..|.+|++++++++|||+|.. +++|+++++++...+.+.. ..+..|.|+++|++ ++
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~---------------------~~~~~P~gia~d~~~~~ 180 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ---------------------DNLGLPNGLTFDAFSSQ 180 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC---------------------TTCSCEEEEEEETTTTE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE---------------------CCCCCCcEEEEcCCCCE
Confidence 679999999977799999987 6899999988654443321 12568999999986 58
Q ss_pred EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCceEEE
Q 001380 850 IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQT 929 (1089)
Q Consensus 850 lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~~~~~ 929 (1089)
|||+|..+++|.++|++++...++.. .+..|.||+++ +++|||+|..+++|.++++.+. ..+.+
T Consensus 181 lyv~d~~~~~I~~~~~~g~~~~~~~~--------------~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g-~~~~~ 244 (267)
T 1npe_A 181 LCWVDAGTHRAECLNPAQPGRRKVLE--------------GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS-KEMDT 244 (267)
T ss_dssp EEEEETTTTEEEEEETTEEEEEEEEE--------------CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTT-EEEEE
T ss_pred EEEEECCCCEEEEEecCCCceEEEec--------------CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCC-CceEE
Confidence 99999999999999998766655542 24679999998 6799999999999999999865 24455
Q ss_pred Ee
Q 001380 930 LE 931 (1089)
Q Consensus 930 l~ 931 (1089)
+.
T Consensus 245 i~ 246 (267)
T 1npe_A 245 FH 246 (267)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 38
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.91 E-value=4.6e-22 Score=243.18 Aligned_cols=210 Identities=18% Similarity=0.218 Sum_probs=164.3
Q ss_pred CCCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEE-EEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFI-VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 595 ~~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~-~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
....++..|.+|++++.+++|||+|..+++|.+++.+|... ..+... .+..|.|||+|+.++.|||
T Consensus 34 ~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~-------------~~~~P~GlAvD~~~~~ly~ 100 (619)
T 3s94_A 34 IVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-------------GLLSPDGLACDWLGEKLYW 100 (619)
T ss_dssp --CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECS-------------SCSCEEEEEEETTTTEEEE
T ss_pred EEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC-------------CCCCcCeEEEEecCCEEEE
Confidence 34567899999999998999999999999999999998632 222222 1458999999997777999
Q ss_pred EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEE
Q 001380 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRA 752 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~ 752 (1089)
+|..+++|.++++++...+++.. ..+..|++|+++|.++.|||+|++ +++|++.+.++.....
T Consensus 101 ~d~~~~~I~v~~~dG~~~~~l~~----------------~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~ 164 (619)
T 3s94_A 101 TDSETNRIEVSNLDGSLRKVLFW----------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 164 (619)
T ss_dssp EETTTTEEEEEETTSCSCEEEEC----------------SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EeCCCCEEEEEECCCCCEEEEEe----------------CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE
Confidence 99999999999999887777763 125689999999998899999988 6799999988766555
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
+.. ..+.+|+||++|+++++|||+|.++++|++++++++..+.+..
T Consensus 165 l~~--------------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-------------------- 210 (619)
T 3s94_A 165 IIN--------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-------------------- 210 (619)
T ss_dssp EEC--------------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------------
T ss_pred EEe--------------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe--------------------
Confidence 542 2467899999999878999999999999999998655443321
Q ss_pred cccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCe
Q 001380 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR 869 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~ 869 (1089)
..+.+|.||+++.+ +|||+|+++++|.++|..++.
T Consensus 211 -~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 211 -GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp ------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred -CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 12679999999865 999999999999999986653
No 39
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=99.90 E-value=1.1e-23 Score=221.93 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=166.3
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDK 157 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1089)
++|+|+||+||||+++...+..++.++++++|...+.+.+....+.....+++.+ +...........++.+.+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~- 77 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTEL----GIAASEFDHFQAQYEDVMAS- 77 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHT----TCCGGGHHHHHHHHHHHHTT-
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHHc----CCCHHHHHHHHHHHHHHHhh-
Confidence 5799999999999999999999999999999998888888888888776665543 32211122222222222211
Q ss_pred hcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCC
Q 001380 158 YAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNV 237 (1089)
Q Consensus 158 ~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv 237 (1089)
+ .....++||+.++|+.|+++ ++++|+||.....++..++++|+. .+|+.++++++.+..||++++|.++++++|+
T Consensus 78 ~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~ 153 (209)
T 2hdo_A 78 H--YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM-MRMAVTISADDTPKRKPDPLPLLTALEKVNV 153 (209)
T ss_dssp C--GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG-GGEEEEECGGGSSCCTTSSHHHHHHHHHTTC
T ss_pred h--cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH-hhccEEEecCcCCCCCCCcHHHHHHHHHcCC
Confidence 1 11247899999999999999 999999999999999999999996 9999999999999999999999999999999
Q ss_pred CCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccC
Q 001380 238 PTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 238 ~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el 289 (1089)
++++|++|||+.+|+.+|+++|+.++++++|. ..+.+.. |++++.++.++
T Consensus 154 ~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~--a~~~~~~~~el 204 (209)
T 2hdo_A 154 APQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK--VAHRFQKPLDI 204 (209)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC--CSEEESSGGGG
T ss_pred CcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc--CCEEeCCHHHH
Confidence 99999999999999999999999999999876 3455544 99999999887
No 40
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.90 E-value=1.2e-21 Score=220.75 Aligned_cols=238 Identities=16% Similarity=0.181 Sum_probs=183.4
Q ss_pred eEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCC----C
Q 001380 614 RLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN----D 689 (1089)
Q Consensus 614 ~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~----g 689 (1089)
.|+++.. +.|.+++.++.....+... +..|.|+++++.++.|||+|..+++|+++++++ .
T Consensus 3 ~ll~~~~--~~I~~i~~~~~~~~~~~~~--------------~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~ 66 (316)
T 1ijq_A 3 YLFFTNR--HEVRKMTLDRSEYTSLIPN--------------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS 66 (316)
T ss_dssp EEEEECB--SSEEEEETTSCCCEEEECS--------------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------
T ss_pred EEEEECC--CeEEEEECCCcceEehhcC--------------CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc
Confidence 4677775 6799999986544333221 458999999998878999999999999999876 2
Q ss_pred eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCC
Q 001380 690 TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLN 769 (1089)
Q Consensus 690 ~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~ 769 (1089)
...++... .+..|.+|++++.++.||++|.++++|.++++++.....+..
T Consensus 67 ~~~~~~~~----------------~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-------------- 116 (316)
T 1ijq_A 67 SYDTVISR----------------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------------- 116 (316)
T ss_dssp -CEEEECS----------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE--------------
T ss_pred ccEEEEeC----------------CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE--------------
Confidence 33333211 246899999998788999999999999999998776665541
Q ss_pred ccccCCceEEEcCCCCEEEEEeCCC-CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccC-
Q 001380 770 TSFAQPSGISLSPDFMEIYVADSES-SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKN- 847 (1089)
Q Consensus 770 ~~~~~P~glav~~~g~~lyvad~~~-~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~- 847 (1089)
..+..|.||+++|++++|||+|.+. ++|.++++++...+.+... .+..|.||++|++
T Consensus 117 ~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~---------------------~~~~P~gla~d~~~ 175 (316)
T 1ijq_A 117 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---------------------NIQWPNGITLDLLS 175 (316)
T ss_dssp CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---------------------SCSCEEEEEEETTT
T ss_pred CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC---------------------CCCCceEEEEeccC
Confidence 2356899999999777999999886 8999999986655544321 2678999999974
Q ss_pred CcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCceE
Q 001380 848 GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPEL 927 (1089)
Q Consensus 848 G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~~~ 927 (1089)
++|||+|+.+++|.++|.++....++...+ ..+..|.||+++ +|+|||+|+.+++|.++++.++. .+
T Consensus 176 ~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~-----------~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~-~~ 242 (316)
T 1ijq_A 176 GRLYWVDSKLHSISSIDVNGGNRKTILEDE-----------KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS-DV 242 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEECT-----------TTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC-CC
T ss_pred CEEEEEECCCCeEEEEecCCCceEEEeecC-----------CccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc-ce
Confidence 689999999999999999887777775321 146789999998 47999999999999999985431 34
Q ss_pred EEEe
Q 001380 928 QTLE 931 (1089)
Q Consensus 928 ~~l~ 931 (1089)
.++.
T Consensus 243 ~~i~ 246 (316)
T 1ijq_A 243 NLLA 246 (316)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 41
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=2.5e-22 Score=235.72 Aligned_cols=237 Identities=20% Similarity=0.306 Sum_probs=186.7
Q ss_pred CCCCCCCCCCCC-ccccCCcceeEEee-CCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCc
Q 001380 641 SGEEGLRDGSFD-DATFNRPQGLAYNA-KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSP 718 (1089)
Q Consensus 641 ~g~~g~~dG~~~-~~~f~~P~gla~d~-~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P 718 (1089)
.+..|+.||.+. .++|.+|.+|+++| +++.|||+|.. ++|++||++++.++++... +..|
T Consensus 120 ~g~~g~~dG~~~~~~~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~-----------------~~~P 181 (430)
T 3tc9_A 120 NTKYDLKDGPFDDCGGFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSG-----------------LSKV 181 (430)
T ss_dssp TTBCCBCCEEGGGCBCCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECC-----------------CSCE
T ss_pred CCCccccCCCHHHccCCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecC-----------------CCCc
Confidence 457778899884 45799999999997 35559999987 9999999999999988741 3589
Q ss_pred eeEEEecCCCEEEEEECCCc----EEEEEECCCCeE--EEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeC
Q 001380 719 WDVCYKPINEKVYIAMAGQH----QIWEHSTVDGVT--RAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS 792 (1089)
Q Consensus 719 ~~la~~~~g~~lyvad~~~~----~I~~~~~~~g~~--~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~ 792 (1089)
.+|+++++|+.|||++.+++ .+..++..+... ..+ ..+..|+++++++++++|||+|.
T Consensus 182 ~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l----------------~~~~~p~giavdp~~g~lyv~d~ 245 (430)
T 3tc9_A 182 RTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITEL----------------TKGQNCNGAETHPINGELYFNSW 245 (430)
T ss_dssp EEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEE----------------EECSSCCCEEECTTTCCEEEEET
T ss_pred ceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeee----------------ccCCCceEEEEeCCCCEEEEEEC
Confidence 99999999988999998644 455566543322 111 23678999999995459999999
Q ss_pred CCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCCC--Ce
Q 001380 793 ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPAS--NR 869 (1089)
Q Consensus 793 ~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~--~~ 869 (1089)
.+++|++++++++....+... + ....|.+|+++++|+ +||+|..+|+|.+++.++ +.
T Consensus 246 ~~~~V~~~~~~~~~~~~~~~~-----------~---------~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~ 305 (430)
T 3tc9_A 246 NAGQVFRYDFTTQETTPLFTI-----------Q---------DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKR 305 (430)
T ss_dssp TTTEEEEEETTTTEEEEEEEC-----------S---------SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred CCCEEEEEECCCCcEEEEEEc-----------C---------CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccc
Confidence 999999999986655333210 1 024799999999998 999999999999998764 32
Q ss_pred ---EEEEecc-CCCCCCCCcccccccCCCc-eEEEc--------cCCcEEEEECCCCEEEEEeCCCCCceEEEEeecc
Q 001380 870 ---VSTLAGI-GKAGFKDGAALAAQLSEPA-GIIEA--------QNGNLFIADTNNNIIRYLDLNKEEPELQTLELKG 934 (1089)
Q Consensus 870 ---v~t~~g~-g~~g~~~g~~~~~~l~~P~-gi~vd--------~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~~~~ 934 (1089)
+.++++. +..|+.+|....++|+.|. |++++ ++|+|||+|+.||+|+++++++ .+.++.+.|
T Consensus 306 ~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G---~v~~~~g~g 380 (430)
T 3tc9_A 306 LTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQG---RVTTFAGRG 380 (430)
T ss_dssp ECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTS---EEEEEEECC
T ss_pred ccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCC---cEEEEEeCC
Confidence 4677776 6778888888888999999 89994 5689999999999999999765 467777553
No 42
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.90 E-value=1.8e-22 Score=216.79 Aligned_cols=212 Identities=15% Similarity=0.212 Sum_probs=166.3
Q ss_pred CCCCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCC-------------CHHH----HHHHHHhhc
Q 001380 74 SKWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGT-------------GEAN----FLGGVASVK 136 (1089)
Q Consensus 74 ~~~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~~ 136 (1089)
+||+++|+|+||+||||+++...+..++.++++++|+.........+.+. .... ....+....
T Consensus 2 n~mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (238)
T 3ed5_A 2 NAMKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEY 81 (238)
T ss_dssp --CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHT
T ss_pred CccccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHc
Confidence 34567899999999999999999999999999999998776544322211 1111 112222223
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcC
Q 001380 137 GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSAD 216 (1089)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~ 216 (1089)
+... ... .+.+.|.+.+... ..++||+.++|+.|+++ ++++|+||.....++..++.+|+. .+|+.+++++
T Consensus 82 ~~~~-~~~----~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~ 152 (238)
T 3ed5_A 82 GYEA-DGA----LLEQKYRRFLEEG--HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLF-PFFKDIFVSE 152 (238)
T ss_dssp TCCC-CHH----HHHHHHHHHHTTC--CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCG-GGCSEEEEGG
T ss_pred CCCC-cHH----HHHHHHHHHHHhc--CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChH-hhhheEEEec
Confidence 3322 222 3333444444333 37899999999999999 999999999999999999999996 9999999999
Q ss_pred CccCCCCCHHHHHHHHHHcC-CCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHH
Q 001380 217 AFENLKPAPDIFLSASKILN-VPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294 (1089)
Q Consensus 217 ~~~~~KP~~~~~~~~l~~lg-v~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~l 294 (1089)
+.+..||++.+|+++++++| ++|++|++|||+. +|+++|+++|+.++++.++... ......|++++.++.+| .++
T Consensus 153 ~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~-~~~~~~ad~v~~~~~el--~~~ 229 (238)
T 3ed5_A 153 DTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKP-NVPEIIPTYEIRKLEEL--YHI 229 (238)
T ss_dssp GTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCC-CTTCCCCSEEESSGGGH--HHH
T ss_pred ccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCC-CcccCCCCeEECCHHHH--HHH
Confidence 99999999999999999999 9999999999998 9999999999999999987532 33456899999999998 666
Q ss_pred Hhc
Q 001380 295 LTG 297 (1089)
Q Consensus 295 l~~ 297 (1089)
|..
T Consensus 230 l~~ 232 (238)
T 3ed5_A 230 LNI 232 (238)
T ss_dssp HTC
T ss_pred HHh
Confidence 654
No 43
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.90 E-value=7.6e-22 Score=229.43 Aligned_cols=227 Identities=21% Similarity=0.257 Sum_probs=180.0
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCE----EEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNF----IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~----~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
..+..|.+|++|+.+++|||+|..+++|.+++.+|.. ...+... .+..|.|||+|+.++.|||
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~-------------~~~~p~glavD~~~~~lY~ 175 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-------------DIQAPDGLAVDWIHSNIYW 175 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS-------------SCSCEEEEEEETTTTEEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC-------------CCCCcccEEEEecCCceEE
Confidence 4578899999998899999999999999999998732 2222221 2568999999986667999
Q ss_pred EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEE
Q 001380 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRA 752 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~ 752 (1089)
+|..+++|.+++++++..+++... .+..|.+|+++|.++.||++|++ +++|++++.++...+.
T Consensus 176 ~d~~~~~I~~~~~~g~~~~~l~~~----------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 176 TDSVLGTVSVADTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EETTTTEEEEECTTTCSEEEEEEC----------------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred EECCCCeEEEEeCCCCceEEEEeC----------------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 999999999999998887777632 25689999999988899999988 4899999988766665
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
+.. ..+.+|+||++|+++++|||+|+.+++|++++++++..+++...
T Consensus 240 ~~~--------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~------------------- 286 (400)
T 3p5b_L 240 LVT--------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED------------------- 286 (400)
T ss_dssp EEC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEEC-------------------
T ss_pred EEE--------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeC-------------------
Confidence 542 34678999999988889999999999999999987766655431
Q ss_pred cccccCceEEEEccCCcEEEEeCCCCEEEEEeCC-CCeEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA-SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~-~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
...+.+|.||+++ ++.|||+|+++++|.++|+. +..+.++.. .+..|.+|++..
T Consensus 287 ~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~--------------~~~~p~~i~v~~ 341 (400)
T 3p5b_L 287 EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE--------------NLLSPEDMVLFH 341 (400)
T ss_dssp SSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC--------------SCSCEEEEEEES
T ss_pred CCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec--------------CCCCCceEEEEe
Confidence 1137799999996 67999999999999999954 445555542 356788888753
No 44
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.90 E-value=4.9e-23 Score=221.39 Aligned_cols=210 Identities=19% Similarity=0.265 Sum_probs=168.5
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCC---CHHhHhhhcC--------------CCHHHH----HHHHHhh
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEV---TVEDFLPFMG--------------TGEANF----LGGVASV 135 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~---~~~~~~~~~~--------------~~~~~~----~~~~~~~ 135 (1089)
|++|+|+||+||||+++...+..++.++++++|+.. +.+.+...+. .....+ ...+...
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999875 5544432221 111111 2223333
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEc
Q 001380 136 KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSA 215 (1089)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~ 215 (1089)
.+.. .......+.+.+.+.+... ..++||+.++|+.|+ +|++++|+||.....++..++.+|+. .+|+.++++
T Consensus 83 ~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~-~~f~~~~~~ 155 (240)
T 3qnm_A 83 VGVE---DEALAERFSEDFFAIIPTK--SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVD-RYFKKIILS 155 (240)
T ss_dssp TTCC---CHHHHHHHHHHHHHHGGGC--CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCG-GGCSEEEEG
T ss_pred cCCC---cHHHHHHHHHHHHHHhhhc--CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChH-hhceeEEEe
Confidence 3432 4455556666666655443 378999999999999 99999999999999999999999996 999999999
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHH
Q 001380 216 DAFENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDI 294 (1089)
Q Consensus 216 ~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~l 294 (1089)
++.+..||++.+|+.+++++|++|++|++|||++ +|+++|+++|+.+++++++.. ......|+++++++.|+ ..+
T Consensus 156 ~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~--~~~~~~~d~vi~sl~e~--~~~ 231 (240)
T 3qnm_A 156 EDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER--TVFPFQPTYHIHSLKEL--MNL 231 (240)
T ss_dssp GGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC--CCCSSCCSEEESSTHHH--HHH
T ss_pred ccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC--CCcCCCCceEECCHHHH--HHH
Confidence 9999999999999999999999999999999996 999999999999999999864 33456899999999998 555
Q ss_pred Hhc
Q 001380 295 LTG 297 (1089)
Q Consensus 295 l~~ 297 (1089)
+++
T Consensus 232 ~~~ 234 (240)
T 3qnm_A 232 LEG 234 (240)
T ss_dssp TC-
T ss_pred Hhc
Confidence 543
No 45
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=99.90 E-value=1.8e-22 Score=214.74 Aligned_cols=210 Identities=26% Similarity=0.395 Sum_probs=174.5
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCC-HHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVT-VEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+++...+..++.++++++|.... .+.+....+.........+....++...........+.+.+.+
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 87 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence 579999999999999999888999999999998765 4455566677766666666555555444555555555555544
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcC
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILN 236 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lg 236 (1089)
.+... ..++|++.++|+.|++.|++++++||.....++..++.+++. .+|+.++++++....||++..|+++++++|
T Consensus 88 ~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 164 (226)
T 1te2_A 88 LVEET--RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR-DSFDALASAEKLPYSKPHPQVYLDCAAKLG 164 (226)
T ss_dssp HHHHH--CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEECTTSSCCTTSTHHHHHHHHHHT
T ss_pred HHhcc--CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcH-hhCcEEEeccccCCCCCChHHHHHHHHHcC
Confidence 43222 267999999999999999999999999999999999999996 899999999999999999999999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCC
Q 001380 237 VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290 (1089)
Q Consensus 237 v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~ 290 (1089)
++++++++|||+.+|+++|+.+|+.++++.++....+.....|++++.++.++.
T Consensus 165 i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~ 218 (226)
T 1te2_A 165 VDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 218 (226)
T ss_dssp SCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred CCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHh
Confidence 999999999999999999999999999999976333334567999999999984
No 46
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.90 E-value=9.9e-22 Score=220.84 Aligned_cols=224 Identities=18% Similarity=0.221 Sum_probs=179.0
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEE--EEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEE
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFI--VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~--~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD 675 (1089)
..+..|.++++|+.+++|||+|..+++|.+++++|... ..+.. .+..|.||++|+.++.|||+|
T Consensus 32 ~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~--------------~l~~p~glavd~~~g~ly~~d 97 (318)
T 3sov_A 32 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS--------------GLLSPDGLACDWLGEKLYWTD 97 (318)
T ss_dssp EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE--------------CCSCCCEEEEETTTTEEEEEE
T ss_pred cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC--------------CCCCccEEEEEcCCCeEEEEE
Confidence 45677889999988899999999999999999987631 12211 156899999998777799999
Q ss_pred CCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEEEe
Q 001380 676 TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRAFS 754 (1089)
Q Consensus 676 ~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~~~ 754 (1089)
..+++|.++++++...+++... .+..|.+|+++|.++.||++|.+ +++|++++.++...+.+.
T Consensus 98 ~~~~~I~~~~~dG~~~~~l~~~----------------~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 98 SETNRIEVSNLDGSLRKVLFWQ----------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp TTTTEEEEEETTSCSCEEEECS----------------SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEeC----------------CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 9999999999988776666521 15689999999988899999987 799999998876555554
Q ss_pred CCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccc
Q 001380 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834 (1089)
Q Consensus 755 g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~ 834 (1089)
. ..+..|+||++|+++++|||+|+.+++|++++.+++..+++..+
T Consensus 162 ~--------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~--------------------- 206 (318)
T 3sov_A 162 N--------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG--------------------- 206 (318)
T ss_dssp C--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------------------
T ss_pred E--------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecC---------------------
Confidence 2 33678999999998789999999999999999987666555321
Q ss_pred cccCceEEEEccCCcEEEEeCCCCEEEEEeCCCC-eEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 835 LLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN-RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 835 ~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~-~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
.+.+|.|++++ .+.+||+|+++++|.++++.+| ...++.. .+..|.+|++..
T Consensus 207 ~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~--------------~~~~P~~i~v~~ 259 (318)
T 3sov_A 207 SLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIHS--------------DIFSPMDIHAFS 259 (318)
T ss_dssp CCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC--------------CCSSCCCEEEEC
T ss_pred CCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEeC--------------CCCCCcEEEEec
Confidence 26799999998 5689999999999999999544 4455542 356788888753
No 47
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.89 E-value=2.3e-21 Score=225.37 Aligned_cols=240 Identities=16% Similarity=0.185 Sum_probs=187.8
Q ss_pred CCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCC--
Q 001380 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND-- 689 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g-- 689 (1089)
...|++++. +.|.+++.++.....+... +..|.||++++.++.|||+|..+++|+++++++.
T Consensus 83 ~~~ll~~~~--~~I~~i~l~~~~~~~~~~~--------------~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~ 146 (400)
T 3p5b_L 83 IAYLFFTNR--HEVRKMTLDRSEYTSLIPN--------------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 146 (400)
T ss_dssp SCEEEEEET--TEEEEECTTSCSCEEEECS--------------CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----
T ss_pred cceeEEecc--ceeEEEccCCcceeEeccc--------------cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC
Confidence 456777775 7999999997654443322 4589999999987789999999999999998762
Q ss_pred --eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCC
Q 001380 690 --TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767 (1089)
Q Consensus 690 --~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~ 767 (1089)
...++...+ +..|.|||+++.++.|||+|.++++|+++++++.....+..
T Consensus 147 ~~~~~~~~~~~----------------~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~------------ 198 (400)
T 3p5b_L 147 VSSYDTVISRD----------------IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR------------ 198 (400)
T ss_dssp -CCCEEEECSS----------------CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE------------
T ss_pred CCcceEEEeCC----------------CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe------------
Confidence 344444222 56899999999888999999999999999998877666642
Q ss_pred CCccccCCceEEEcCCCCEEEEEeCC-CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc
Q 001380 768 LNTSFAQPSGISLSPDFMEIYVADSE-SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846 (1089)
Q Consensus 768 ~~~~~~~P~glav~~~g~~lyvad~~-~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~ 846 (1089)
..+.+|.||++++.++.|||+|.+ +++|+++++++...+.+... .+.+|.||++|+
T Consensus 199 --~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~---------------------~l~~P~glavd~ 255 (400)
T 3p5b_L 199 --ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---------------------NIQWPNGITLDL 255 (400)
T ss_dssp --CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS---------------------SCSCEEEEEEET
T ss_pred --CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC---------------------CCCceEEEEEEe
Confidence 346689999999977799999987 48999999987666555321 267899999996
Q ss_pred -CCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCc
Q 001380 847 -NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEP 925 (1089)
Q Consensus 847 -~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~ 925 (1089)
+++|||+|+.+++|.++|.++....++... ...+..|.||+++ +++|||+|+.+++|.+++..++.
T Consensus 256 ~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-----------~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~- 322 (400)
T 3p5b_L 256 LSGRLYWVDSKLHSISSIDVNGGNRKTILED-----------EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS- 322 (400)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCCCEEEEEC-----------SSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCC-
T ss_pred CCCEEEEEECCCCEEEEEeCCCCccEEEEeC-----------CCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCC-
Confidence 568999999999999999998877777532 1257889999997 56899999999999999954431
Q ss_pred eEEEEe
Q 001380 926 ELQTLE 931 (1089)
Q Consensus 926 ~~~~l~ 931 (1089)
.+.++.
T Consensus 323 ~~~~i~ 328 (400)
T 3p5b_L 323 DVNLLA 328 (400)
T ss_dssp CCEEEE
T ss_pred ceEEEe
Confidence 345554
No 48
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.89 E-value=4.2e-21 Score=234.81 Aligned_cols=286 Identities=16% Similarity=0.194 Sum_probs=209.2
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~ 676 (1089)
..++..|.|||+|+.+++|||+|..+++|.+++++|.....+... .+..|.+|++||.+..|||+|+
T Consensus 76 ~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~-------------~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 76 EFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK-------------DLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECS-------------SCCCEEEEEEETTTTEEEEEEC
T ss_pred eCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC-------------CCCCcccEEEccCCCeEEEeCC
Confidence 345678999999998999999999999999999999866555432 2568999999997667999998
Q ss_pred C-CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeC
Q 001380 677 E-NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSG 755 (1089)
Q Consensus 677 ~-n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g 755 (1089)
+ +++|.++++++...+++.. .+..|.||++|+.+++|||+|.++++|++++.+++..+.+.
T Consensus 143 g~~~~I~r~~~dG~~~~~l~~-----------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~- 204 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSERTTLVP-----------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA- 204 (628)
T ss_dssp SSSCEEEEEETTSCSCEEEEC-----------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-
T ss_pred CCCCEEEEEeCCCCceEEEEC-----------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee-
Confidence 6 7899999999888777762 15689999999998899999999999999999876554443
Q ss_pred CCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCC-eEEEecCCCCCCC---------------
Q 001380 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG-SRLLAGGDPIFPD--------------- 819 (1089)
Q Consensus 756 ~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~-~~~~~g~~~~~~~--------------- 819 (1089)
..+..|.||+++. + +|||+|..+++|.+++..+|. .+++..+.. .+.
T Consensus 205 --------------~~l~~P~glav~~-~-~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~-~p~~i~v~~~~~q~~~n~ 267 (628)
T 4a0p_A 205 --------------DDLPHPFGLTQYQ-D-YIYWTDWSRRSIERANKTSGQNRTIIQGHLD-YVMDILVFHSSRQSGWNE 267 (628)
T ss_dssp --------------ECCSCEEEEEEET-T-EEEEEETTTTEEEEEETTTCCSCEEEECSCC-SCCEEEEECGGGSCCCCT
T ss_pred --------------ccCCCceEEEEEC-C-EEEEecCCCCEEEEEECCCCCceEEEecCCC-CcceeeeeeecccccceE
Confidence 2356899999986 3 999999999999999976554 233332110 000
Q ss_pred -----------------Cccc----cCC---CCC-------------------------cc------ccccccCceEEEE
Q 001380 820 -----------------NLFK----FGD---RDG-------------------------MG------SEVLLQHPLGVYC 844 (1089)
Q Consensus 820 -----------------~l~~----~g~---~dg-------------------------~~------~~~~l~~P~gva~ 844 (1089)
+-+. .|. .|+ .. .-..+.++.+|++
T Consensus 268 C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~ 347 (628)
T 4a0p_A 268 CASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDY 347 (628)
T ss_dssp TTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEE
T ss_pred eccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEE
Confidence 0000 000 011 00 0123456789999
Q ss_pred cc-CCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccC-CcEEEEECCCCEEEEEeCCC
Q 001380 845 AK-NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN-GNLFIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 845 ~~-~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~-G~lyVad~~n~~I~~~~~~~ 922 (1089)
|+ ++.|||+|..+++|++++.++....++......+ ...+..|.|||+|+. ++||++|+.+++|.+++++|
T Consensus 348 d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~-------~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G 420 (628)
T 4a0p_A 348 DPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPS-------QNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG 420 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---------------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ecCCCeEEEEecCcceEEEEEcCCCCceEEEEccccc-------ccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCC
Confidence 97 5789999999999999998876554443210000 114678999999985 57999999999999999998
Q ss_pred CCceEEEEeecccCCCC
Q 001380 923 EEPELQTLELKGVQPPT 939 (1089)
Q Consensus 923 ~~~~~~~l~~~~~~~p~ 939 (1089)
. ...++...++..|.
T Consensus 421 ~--~~~~l~~~~l~~Pr 435 (628)
T 4a0p_A 421 R--SVGVVLKGEQDRPR 435 (628)
T ss_dssp C--EEEEEEECTTCCEE
T ss_pred C--eEEEEEeCCCCcee
Confidence 7 45555444444443
No 49
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=99.89 E-value=8.5e-23 Score=218.88 Aligned_cols=215 Identities=21% Similarity=0.277 Sum_probs=168.7
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHH-cCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCC----CHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAE-MGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGF----DSEAAKKRFFE 152 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 152 (1089)
++|+|+||+||||+++...+..++.+++++ +|.... +.+....++........+....+.... ........+.+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-TGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIA 81 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-cchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHH
Confidence 579999999999999999999999999988 788766 556667788777766666655554210 01222233333
Q ss_pred HHHHHhcCCCCCCCCccHHHHHHHHHhC-CCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCcc-CCCCCHHHHHH
Q 001380 153 IYLDKYAKPNSGIGFPGALELINQCKSK-GLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFE-NLKPAPDIFLS 230 (1089)
Q Consensus 153 ~~~~~~~~~~~~~~~pG~~~lL~~Lk~~-Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~-~~KP~~~~~~~ 230 (1089)
.+.+.+. .....++||+.++|+.|+++ |++++|+||.....++..++.+|+. .+|+.++++++.. ..||.+.+|++
T Consensus 82 ~~~~~~~-~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~~k~~~~~~~~ 159 (234)
T 2hcf_A 82 LFRERAR-REDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID-HYFPFGAFADDALDRNELPHIALER 159 (234)
T ss_dssp HHHHHCC-GGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS-TTCSCEECTTTCSSGGGHHHHHHHH
T ss_pred HHHHHhc-cCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch-hhcCcceecCCCcCccchHHHHHHH
Confidence 3332221 01236799999999999999 9999999999999999999999996 9999888877664 45788999999
Q ss_pred HHHHcC--CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 231 ASKILN--VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 231 ~l~~lg--v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
+++++| ++|++|++|||+.+|+.+|+++|+.+++|.++. ..+.+...+|++++.++.++ .++|..
T Consensus 160 ~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el--~~~l~~ 227 (234)
T 2hcf_A 160 ARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET--DEVLAS 227 (234)
T ss_dssp HHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH--HHHHHH
T ss_pred HHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhH--HHHHHH
Confidence 999999 999999999999999999999999999999987 55666666799999999998 566543
No 50
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.89 E-value=1.9e-21 Score=242.16 Aligned_cols=227 Identities=21% Similarity=0.258 Sum_probs=182.7
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEE----EEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFI----VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~----~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
..+..|.+|++|+.+++|||+|..+++|++++.+|... ..+... .+..|.|||+|+.++.|||
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~-------------~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-------------DIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-------------SCSCCCEEEEETTTTEEEE
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec-------------CCCCcceeeeeecCCcEEE
Confidence 45788999999988999999999999999999987421 222211 2568999999998878999
Q ss_pred EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC-cEEEEEECCCCeEEE
Q 001380 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ-HQIWEHSTVDGVTRA 752 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~-~~I~~~~~~~g~~~~ 752 (1089)
+|..+++|+++++++...+++...+ +..|.+||++|.++.|||+|+++ ++|+++++++...+.
T Consensus 488 tD~~~~~I~v~~ldG~~~~~l~~~~----------------l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKRKTLFREN----------------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp EETTTTEEEEEETTSSSEEEEEECT----------------TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred EecCCCeEEEEeCCCCeEEEEEeCC----------------CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 9999999999999988888876322 56899999999988999999987 899999998777766
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
+.. ..+.+|+||++|+.+++|||+|.++++|+++++++...+++..+
T Consensus 552 lv~--------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~------------------- 598 (791)
T 3m0c_C 552 LVT--------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED------------------- 598 (791)
T ss_dssp EEC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC-------------------
T ss_pred EEe--------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecC-------------------
Confidence 652 34678999999987779999999999999999998776665432
Q ss_pred cccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCC-eEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN-RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~-~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
...+.+|.||+++ .++|||+|+++++|.++|..+| .+.++.. .+..|.+|++..
T Consensus 599 ~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~--------------~l~~P~~i~v~h 653 (791)
T 3m0c_C 599 EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE--------------NLLSPEDMVLFH 653 (791)
T ss_dssp TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC--------------SCSCCCCEEEES
T ss_pred CCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcceEEeec--------------CCCCceeEeeec
Confidence 1237899999996 5699999999999999997555 4555542 467788888764
No 51
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.89 E-value=5.6e-23 Score=206.90 Aligned_cols=143 Identities=22% Similarity=0.411 Sum_probs=130.5
Q ss_pred CCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhh-hhhHHHHHHHcCCCCEEEEEEeCCCCCC--hhc
Q 001380 426 TTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHV-LPDLEFLEKKYKDMPFTVVGVHSAKFDN--EKD 502 (1089)
Q Consensus 426 ~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~-~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~~~ 502 (1089)
.|.++|+|++. .|++|+.+++ ++++||++||+||++||++|+.+ +|.|++++++|+++++.+|+|+++ +.. +++
T Consensus 5 ~g~~~p~~~~~-~~~~g~~~~l-~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~ 81 (160)
T 3lor_A 5 DNAPLLELDVQ-EWVNHEGLSN-EDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMT 81 (160)
T ss_dssp TTCCBCCCCEE-EESSSCCCCH-HHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSC
T ss_pred CCCcCCCcccc-cccCCCccCH-HHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCC
Confidence 68899999964 3579999999 99999999999999999999996 999999999999889999999875 222 368
Q ss_pred HHHHHHHHHHcCCccceeecCChh------HHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 503 LEAIRNAVLRYGISHPVVNDGDMN------LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d~~~~------l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
.+.+++++++++++||++.|.+.. +++.|+|.++|++||||++|+++.++.|..+.+.+.+.|+.++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 82 PEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 999999999999999999999888 999999999999999999999999999999999999999988864
No 52
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=99.89 E-value=3.1e-22 Score=212.36 Aligned_cols=211 Identities=29% Similarity=0.364 Sum_probs=171.7
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCC-CCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHH---HHHHHHHHHH
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE-VTVEDFLPFMGTGEANFLGGVASVKGVKGFDSE---AAKKRFFEIY 154 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 154 (1089)
+|+|+||+||||+++...+..++.++++++|.. .+...+....+.+.......+....+... ... .....+.+.+
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKV-SAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCCC-ChHHHHHHHHHHHHHH
Confidence 689999999999999998899999999999988 77777777778877776666665554321 222 2333333344
Q ss_pred HHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHH
Q 001380 155 LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKI 234 (1089)
Q Consensus 155 ~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~ 234 (1089)
...+.......++||+.++|+.|++.|++++++||. ...+..++.+++. .+|+.++++++.+..||++++|+.++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 157 (221)
T 2wf7_A 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLT-GYFDAIADPAEVAASKPAPDIFIAAAHA 157 (221)
T ss_dssp HHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCG-GGCSEECCTTTSSSCTTSSHHHHHHHHH
T ss_pred HHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChH-HHcceEeccccCCCCCCChHHHHHHHHH
Confidence 443332112367899999999999999999999998 5678889999996 9999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 235 LNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 235 lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
+|++|++|++|||+.+|+++|+.+|+.+++++. .++++ .|++++.++.++.+..++...
T Consensus 158 lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~---~~~~~--~a~~v~~~~~el~~~~~~~~~ 216 (221)
T 2wf7_A 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR---PEDLG--DDIVIVPDTSHYTLEFLKEVW 216 (221)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC---HHHHC--SSSEEESSGGGCCHHHHHHHH
T ss_pred cCCChhHeEEEeCCHHHHHHHHHCCCEEEEECC---HHHhc--cccchhcCHHhCCHHHHHHHH
Confidence 999999999999999999999999999999953 44554 799999999999888776543
No 53
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.89 E-value=9.4e-23 Score=204.86 Aligned_cols=144 Identities=19% Similarity=0.319 Sum_probs=128.7
Q ss_pred CCCCCCCCccccCC-CCCceeecccccCCCEEEEEEecCCCcchhhh-hhhHHHHHHHcCCCCEEEEEEeCCCCC-Chhc
Q 001380 426 TTPIVPEFPAKLDW-LNTAPLQFRRDLKGKVVVLDFWTYCCINCMHV-LPDLEFLEKKYKDMPFTVVGVHSAKFD-NEKD 502 (1089)
Q Consensus 426 ~g~~~P~f~~~~~~-~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~-~p~l~~l~~~~~~~~v~vi~v~~~~~~-~~~~ 502 (1089)
.|+++|+|++.. | -+|+.+++ ++++||++||+||++||++|+.+ +|.|++++++|++.++.+|+|+++... ..++
T Consensus 2 ~g~~aP~f~l~~-~~~~g~~~~l-~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~ 79 (158)
T 3eyt_A 2 NAMKAPELQIQQ-WFNSATDLTL-ADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMT 79 (158)
T ss_dssp CCEECCCCCEEE-EESCSSCCCT-GGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSC
T ss_pred CCCcCCCceehh-hhcCCCccCH-HHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCC
Confidence 588999999652 2 26789999 99999999999999999999997 999999999999889999999875211 1468
Q ss_pred HHHHHHHHHHcCCccceeecCCh-----hHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 503 LEAIRNAVLRYGISHPVVNDGDM-----NLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d~~~-----~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
.+.+++|+++++++||++.|.+. .+++.|+|.++|++||||++|++++++.|..+.+.+.+.|+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 80 PISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp HHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999999999999999999887 7999999999999999999999999999999999999999988864
No 54
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.89 E-value=3.3e-21 Score=217.76 Aligned_cols=262 Identities=18% Similarity=0.183 Sum_probs=193.6
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCC---CCCCC---CCccccCCcceeEEee-CCC
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEG---LRDGS---FDDATFNRPQGLAYNA-KKN 669 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g---~~dG~---~~~~~f~~P~gla~d~-~g~ 669 (1089)
...|..|.++++|+ +|++|+++..+++|.+++.++..+..+....... ..+|. .....+..|.||++++ +|+
T Consensus 15 ~g~~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 15 EAPSYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp ECSSSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred CCccCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 35688999999997 6886667788899999999875555554321100 00111 1123456899999997 565
Q ss_pred EEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEec-CCCEEEEEECCC-----------
Q 001380 670 LLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP-INEKVYIAMAGQ----------- 737 (1089)
Q Consensus 670 ~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~-~g~~lyvad~~~----------- 737 (1089)
|||+|.. +.|+++|++++.+++++.... ...+..|.+|++++ +| .|||++.++
T Consensus 94 -l~v~d~~-~~i~~~d~~~g~~~~~~~~~~------------~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 94 -LYIVDCY-YHLSVVGSEGGHATQLATSVD------------GVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp -EEEEETT-TEEEEECTTCEECEEEESEET------------TEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHH
T ss_pred -EEEEECC-CCEEEEeCCCCEEEEecccCC------------CCcccccceEEEecCCC-EEEEECCcccccccccceeh
Confidence 9999986 559999998888777753210 12356899999999 77 899999763
Q ss_pred ------cEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCC---eE
Q 001380 738 ------HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG---SR 808 (1089)
Q Consensus 738 ------~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~---~~ 808 (1089)
+.|+++|+.++.+..+. ..+..|+||+++++|+.|||+|..+++|++++.++.. ..
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~---------------~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~ 223 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLL---------------KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAE 223 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEE---------------EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEE
T ss_pred cccCCCceEEEEeCCCCEEEEec---------------cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccc
Confidence 68999999888877664 2356799999999998899999999999999987521 11
Q ss_pred EEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCC----------CCEEEEEeCCCCeEEEEeccCC
Q 001380 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY----------NHKIKKLDPASNRVSTLAGIGK 878 (1089)
Q Consensus 809 ~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~----------n~~I~~~d~~~~~v~t~~g~g~ 878 (1089)
.+. .+..|.|+++|++|++||++.. +++|.++|+++..+..+....
T Consensus 224 ~~~-----------------------~~~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~- 279 (322)
T 2fp8_A 224 VLV-----------------------KIPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPP- 279 (322)
T ss_dssp EEE-----------------------ECSSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCT-
T ss_pred eEE-----------------------eCCCCCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCC-
Confidence 111 0123999999999999999976 678999999877776665321
Q ss_pred CCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCC
Q 001380 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 879 ~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
| ..+..|.+++.+ +|+|||++..+++|.++++..+
T Consensus 280 -----g----~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 280 -----P----FAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp -----T----TTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC---
T ss_pred -----C----CccccceEEEEe-CCEEEEeecCCCceEEEecccc
Confidence 1 136789999885 7899999999999999999765
No 55
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=99.89 E-value=3e-22 Score=216.21 Aligned_cols=212 Identities=18% Similarity=0.194 Sum_probs=161.3
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcC---CCCCHHhHhhhcCCC-------HHHHHHHHHhhc-CCCCCCHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMG---VEVTVEDFLPFMGTG-------EANFLGGVASVK-GVKGFDSEAA 146 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g---~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~ 146 (1089)
|+|+|+||+||||+|+...+..++.+++++++ +....+++...+... .......+.... +.. . ...
T Consensus 1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 77 (241)
T 2hoq_A 1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY--N-PKW 77 (241)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC--C-HHH
T ss_pred CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc--c-chH
Confidence 36899999999999999988888988888863 444444332221100 011122222222 322 1 122
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHH
Q 001380 147 KKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPD 226 (1089)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~ 226 (1089)
...+.+.+.+.+... ..++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++++..||+++
T Consensus 78 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~ 154 (241)
T 2hoq_A 78 ISAGVIAYHNTKFAY--LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD-DFFEHVIISDFEGVKKPHPK 154 (241)
T ss_dssp HHHHHHHHHHHHHHH--CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTCHH
T ss_pred HHHHHHHHHHHHHhh--CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH-hhccEEEEeCCCCCCCCCHH
Confidence 234444444433222 267999999999999999999999999999999999999996 99999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHH-hhcCCcEEecCcccCCHHHHHhc
Q 001380 227 IFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERL-KEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 227 ~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l-~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
+|.++++++|++|++|+||||+. +|+.+|+++|+.+++|.+|. ..+.+ ....|++++.++.++ .++|..
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el--~~~l~~ 226 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL--LEVLAR 226 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHH--HHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHH--HHHHHH
Confidence 99999999999999999999998 99999999999999998876 44444 245799999999998 556643
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.89 E-value=9.6e-21 Score=235.92 Aligned_cols=247 Identities=16% Similarity=0.187 Sum_probs=190.4
Q ss_pred CCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCC--
Q 001380 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND-- 689 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g-- 689 (1089)
...|++++. +.|.+++.++.....+... +..|.||++++.++.|||+|..+++|+++++++.
T Consensus 395 ~p~Ll~an~--~~Ir~i~l~~~~~~~l~~~--------------~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~ 458 (791)
T 3m0c_C 395 IAYLFFTNR--HEVRKMTLDRSEYTSLIPN--------------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 458 (791)
T ss_dssp CCEEEEECB--SSEEEECTTSCCCEEEECS--------------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----
T ss_pred ccccccccc--cceeEeeccCCcceeeecC--------------CCceEEEeecccCCeeEEeeccceeEEEEeccCCCC
Confidence 346777765 6788888886544443322 4588999999977789999999999999998763
Q ss_pred --eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCC
Q 001380 690 --TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767 (1089)
Q Consensus 690 --~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~ 767 (1089)
...++... .+..|.|||+++.++.|||+|.++++|+++++.+...+.+..
T Consensus 459 ~~~~~~vi~~----------------~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~------------ 510 (791)
T 3m0c_C 459 VSSYDTVISR----------------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR------------ 510 (791)
T ss_dssp ---CEEEECS----------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE------------
T ss_pred CcceeEEEec----------------CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe------------
Confidence 33344321 256899999999999999999999999999998887766652
Q ss_pred CCccccCCceEEEcCCCCEEEEEeCCC-CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc
Q 001380 768 LNTSFAQPSGISLSPDFMEIYVADSES-SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846 (1089)
Q Consensus 768 ~~~~~~~P~glav~~~g~~lyvad~~~-~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~ 846 (1089)
..+..|.||||++.+++|||+|.+. ++|.++++++...+++... .|.+|.||++|+
T Consensus 511 --~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~---------------------~l~~P~GLavD~ 567 (791)
T 3m0c_C 511 --ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---------------------NIQWPNGITLDL 567 (791)
T ss_dssp --CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---------------------SCSCEEEEEEET
T ss_pred --CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC---------------------CCCCceEEEEec
Confidence 3456799999999877999999887 8999999997776665431 267899999995
Q ss_pred -CCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCc
Q 001380 847 -NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEP 925 (1089)
Q Consensus 847 -~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~ 925 (1089)
+|+|||+|+.+++|.+++.++....++...+ ..+..|.||+++ .++|||+|+.+++|.+++..++.
T Consensus 568 ~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~-----------~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~- 634 (791)
T 3m0c_C 568 LSGRLYWVDSKLHSISSIDVNGGNRKTILEDE-----------KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS- 634 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEECT-----------TTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC-
T ss_pred CCCeEEEEeCCCCcEEEEecCCCceEEEecCC-----------CccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCc-
Confidence 6799999999999999999988877775321 257889999997 45899999999999999865442
Q ss_pred eEEEEeecccCCCC
Q 001380 926 ELQTLELKGVQPPT 939 (1089)
Q Consensus 926 ~~~~l~~~~~~~p~ 939 (1089)
.+.++. .++..|.
T Consensus 635 ~~~~l~-~~l~~P~ 647 (791)
T 3m0c_C 635 DVNLLA-ENLLSPE 647 (791)
T ss_dssp CCEEEE-CSCSCCC
T ss_pred ceEEee-cCCCCce
Confidence 345553 3444444
No 57
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=99.88 E-value=1.7e-22 Score=216.47 Aligned_cols=203 Identities=20% Similarity=0.266 Sum_probs=161.3
Q ss_pred CCCceEEEEecCCcccCCchHHHHHH-HHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 001380 76 WGKVSAVLFDMDGVLCNSEEPSRRAA-VDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIY 154 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d~~~~~~~a~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (1089)
++++|+|+||+||||+++...+..++ .++++++|... .++....+.........+... ........+.+.+
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~ 93 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKN--IDLDSIPNSTIPKYLITLLGK------RWKEATILYENSL 93 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCC--CCCTTSCTTTHHHHHHHHHGG------GHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCH--HHHHHHhCccHHHHHHHHhCc------hHHHHHHHHHHHH
Confidence 45689999999999999998888888 99999998775 344445565555555444321 2233333343333
Q ss_pred HHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHH
Q 001380 155 LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKI 234 (1089)
Q Consensus 155 ~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~ 234 (1089)
... .......++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++....||++++|+.++++
T Consensus 94 ~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 171 (231)
T 3kzx_A 94 EKS-QKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT-HYFDSIIGSGDTGTIKPSPEPVLAALTN 171 (231)
T ss_dssp HHC-CSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEETSSSCCTTSSHHHHHHHHH
T ss_pred hhh-cccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch-hheeeEEcccccCCCCCChHHHHHHHHH
Confidence 311 11223478999999999999999999999999999999999999996 9999999999999999999999999999
Q ss_pred cCCCCC-cEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 235 LNVPTS-ECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 235 lgv~p~-~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
+|++++ ++++|||+.+|+++|+++|+.++++..+.. ..+++++.++.+| .++|.
T Consensus 172 lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~------~~~~~~~~~~~el--~~~l~ 226 (231)
T 3kzx_A 172 INIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI------IKDILSFKNFYDI--RNFIC 226 (231)
T ss_dssp HTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC-----------CCEEESSHHHH--HHHHH
T ss_pred cCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC------CCCceeeCCHHHH--HHHHH
Confidence 999998 999999999999999999999999966422 4688999999998 55554
No 58
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=221.83 Aligned_cols=213 Identities=21% Similarity=0.275 Sum_probs=167.7
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhc------------------CCCHHHHH----HHHHhhc
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFM------------------GTGEANFL----GGVASVK 136 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~ 136 (1089)
+|+|+||+||||+++...+..++.++++++|+..+.+.+...+ +......+ .......
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA 80 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence 4799999999999988888899999999999998776654322 33333332 2222223
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcC
Q 001380 137 GVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSAD 216 (1089)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~ 216 (1089)
+. .........+.+.+... .......++||+.++|+.|+++|++++|+||... .++..++.+|+. .+|+.+++++
T Consensus 81 ~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~-~~f~~~~~~~ 155 (263)
T 3k1z_A 81 GV--QDAQAVAPIAEQLYKDF-SHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLR-EHFDFVLTSE 155 (263)
T ss_dssp TC--CCHHHHHHHHHHHHHHT-TSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCG-GGCSCEEEHH
T ss_pred CC--CCHHHHHHHHHHHHHHh-cCcccceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcH-HhhhEEEeec
Confidence 33 23333333333343333 2222346899999999999999999999999766 478999999996 9999999999
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC--CHHHHhhcCCcEEecCcccCCHHH
Q 001380 217 AFENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL--SEERLKEASPSLIRKEIGSVSLND 293 (1089)
Q Consensus 217 ~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~--~~~~l~~~~~d~vi~dl~el~i~~ 293 (1089)
+++..||++++|..+++++|++|++|+||||+. +|+.+|+++||.+++++++. ..+.+....|++++.++.+| .+
T Consensus 156 ~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el--~~ 233 (263)
T 3k1z_A 156 AAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL--LP 233 (263)
T ss_dssp HHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGH--HH
T ss_pred ccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHH--HH
Confidence 999999999999999999999999999999998 99999999999999999986 34456677899999999999 56
Q ss_pred HHhcc
Q 001380 294 ILTGG 298 (1089)
Q Consensus 294 ll~~~ 298 (1089)
+|...
T Consensus 234 ~l~~~ 238 (263)
T 3k1z_A 234 ALDCL 238 (263)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 59
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.88 E-value=3.3e-23 Score=207.82 Aligned_cols=123 Identities=16% Similarity=0.242 Sum_probs=106.8
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
.++|+++|+|+++ +.+|++++| ++++||++||+|| ++||++|+.++|.|++++++|++.++.+|+|+. ++
T Consensus 4 l~vG~~aPdF~l~--~~~G~~~~l-~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~------d~ 74 (157)
T 4g2e_A 4 VEIGELAPDFELP--DTELKKVKL-SALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISV------DP 74 (157)
T ss_dssp CCTTSBCCCCEEE--BTTSCEEEG-GGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEES------SC
T ss_pred CCCCCCCcCeEeE--CCCCCEEeH-HHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecc------cc
Confidence 5799999999964 569999999 9999999999999 999999999999999999999999999999985 56
Q ss_pred HHHHHHHHHHcCCccceeecCChhHHHHhCCC-----------ceeEEEEECCCCcEEEEecCC
Q 001380 503 LEAIRNAVLRYGISHPVVNDGDMNLWRELGVN-----------SWPTFAVVGPNGKLLAQLAGE 555 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~G~ 555 (1089)
++.+++|+++++++||++.|.+++++++|||. ..|++||||++|+|++++.+.
T Consensus 75 ~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~ 138 (157)
T 4g2e_A 75 PFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSD 138 (157)
T ss_dssp HHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEES
T ss_pred hhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECC
Confidence 78889999999999999999999999999984 478999999999999987653
No 60
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.88 E-value=5.2e-21 Score=214.99 Aligned_cols=237 Identities=16% Similarity=0.212 Sum_probs=184.3
Q ss_pred CCeEEEEeCCCCEEEEEeCCCCE---EEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCC
Q 001380 612 NNRLFISDSNHNRIVVTDLDGNF---IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN 688 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~g~~---~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~ 688 (1089)
...|++++. +.|.++++++.. ...+.. +..|.+|++++.++.|||+|..+++|+++++++
T Consensus 4 ~p~ll~~~~--~~I~~i~l~~~~~~~~~~~~~---------------~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g 66 (318)
T 3sov_A 4 APLLLYANR--RDLRLVDATNGKENATIVVGG---------------LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNK 66 (318)
T ss_dssp CCEEEEECE--EEEEEEETTCTTSCCEEEEEE---------------EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEEcc--CeEEEEECCCCceEEEEEecC---------------CCccEEEEEEeCCCEEEEEECCCCcEEEEEccC
Confidence 346788874 789999998752 222221 336789999987777999999999999999987
Q ss_pred CeE-EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCC
Q 001380 689 DTV-RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767 (1089)
Q Consensus 689 g~v-~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~ 767 (1089)
+.. .++.. ..+..|.||++++.++.||++|.++++|.++++++...+.+..
T Consensus 67 ~~~~~~~~~----------------~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~------------ 118 (318)
T 3sov_A 67 TESVQNVVV----------------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW------------ 118 (318)
T ss_dssp SSCCCEEEE----------------ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------------
T ss_pred CCceEEEEc----------------CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe------------
Confidence 632 22221 1256899999998888999999999999999998766555541
Q ss_pred CCccccCCceEEEcCCCCEEEEEeCC-CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc
Q 001380 768 LNTSFAQPSGISLSPDFMEIYVADSE-SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846 (1089)
Q Consensus 768 ~~~~~~~P~glav~~~g~~lyvad~~-~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~ 846 (1089)
..+.+|.||++++.++.||++|.+ +++|+++++++...+.+... .+..|.||++|+
T Consensus 119 --~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---------------------~l~~Pnglavd~ 175 (318)
T 3sov_A 119 --QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---------------------EIYWPNGLTLDY 175 (318)
T ss_dssp --SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS---------------------SCSCEEEEEEET
T ss_pred --CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC---------------------CCCCccEEEEec
Confidence 346689999999977799999975 78999999987665555321 267899999997
Q ss_pred -CCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCc
Q 001380 847 -NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEP 925 (1089)
Q Consensus 847 -~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~ 925 (1089)
+++|||+|+.+++|.++|.++....++... .+..|.||+++ .+.||++|+.+++|.++++.++.
T Consensus 176 ~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-------------~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~- 240 (318)
T 3sov_A 176 EEQKLYWADAKLNFIHKSNLDGTNRQAVVKG-------------SLPHPFALTLF-EDILYWTDWSTHSILACNKYTGE- 240 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECS-------------CCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCC-
T ss_pred cCCEEEEEECCCCEEEEEcCCCCceEEEecC-------------CCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCC-
Confidence 578999999999999999988777766521 47889999998 46899999999999999995442
Q ss_pred eEEEEe
Q 001380 926 ELQTLE 931 (1089)
Q Consensus 926 ~~~~l~ 931 (1089)
.++++.
T Consensus 241 ~~~~i~ 246 (318)
T 3sov_A 241 GLREIH 246 (318)
T ss_dssp SCEEEE
T ss_pred ceEEEe
Confidence 344554
No 61
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.88 E-value=7.2e-22 Score=209.85 Aligned_cols=212 Identities=19% Similarity=0.239 Sum_probs=169.9
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCC-CCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE-VTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+++...+..++.++++++|.. ...+.+....+.........+.... ...........+.+.+.+
T Consensus 5 ~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 82 (225)
T 3d6j_A 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT--DADQLESFRQEYSKEADI 82 (225)
T ss_dssp CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHH
Confidence 4799999999999999998999999999999986 5566777777777666655543321 100112223333333433
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcC
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILN 236 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lg 236 (1089)
.+... ..++|++.++++.|++.|++++++|+.....++..++.+++. .+|+.++++++....||++.+|..+++++|
T Consensus 83 ~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 159 (225)
T 3d6j_A 83 YMNAN--TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD-DWFDIIIGGEDVTHHKPDPEGLLLAIDRLK 159 (225)
T ss_dssp HTGGG--CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT-TCCSEEECGGGCSSCTTSTHHHHHHHHHTT
T ss_pred hcccc--CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch-hheeeeeehhhcCCCCCChHHHHHHHHHhC
Confidence 33222 367899999999999999999999999999999999999996 899999999988899999999999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 237 VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 237 v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
++++++++|||+.+|+.+|+.+|+.++++.++. ..+++.+..|++++.++.++ .+++.
T Consensus 160 ~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el--~~~l~ 218 (225)
T 3d6j_A 160 ACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQL--ISVPE 218 (225)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGG--C----
T ss_pred CChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHH--HHhhh
Confidence 999999999999999999999999999999976 55667677799999999998 44443
No 62
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=3.4e-22 Score=198.96 Aligned_cols=138 Identities=17% Similarity=0.259 Sum_probs=125.7
Q ss_pred cCCCCCCCCCCccccCCCCCceeeccc--ccCCCEEEEEEecCCCcc--hhhhhhhHHHHHHHc-CCCCEEEEEEeCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRR--DLKGKVVVLDFWTYCCIN--CMHVLPDLEFLEKKY-KDMPFTVVGVHSAKF 497 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~--~~~gk~vll~Fwa~wC~~--C~~~~p~l~~l~~~~-~~~~v~vi~v~~~~~ 497 (1089)
...+|+++|+|++. +++|+++++ + +++||++||+||++||++ |+.++|.|++++++| +++++.+|+|++
T Consensus 4 ~l~~G~~~p~f~l~--~~~g~~~~l-~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~--- 77 (150)
T 3fw2_A 4 KSEIGKYAPFFSLP--NAKGEKITR-SSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISL--- 77 (150)
T ss_dssp TTSTTSBCCCCCEE--BTTCCEECT-TSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEEC---
T ss_pred cccCCCcCCccEeE--CCCCCEEec-chhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEc---
Confidence 46789999999964 569999999 8 999999999999999999 999999999999999 788899999986
Q ss_pred CChhcHHHHHHHHHHcCCccceeecC---ChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 498 DNEKDLEAIRNAVLRYGISHPVVNDG---DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~v~~d~---~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+++.+.+++++++++++|+++.|. +.++++.|+|.++|++||||++|++++++. +.+.+.+.|++++++
T Consensus 78 --d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 78 --DVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIVEE 149 (150)
T ss_dssp --CSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHHhc
Confidence 456789999999999999999998 679999999999999999999999999875 678888888888764
No 63
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=99.88 E-value=4.2e-22 Score=218.48 Aligned_cols=215 Identities=19% Similarity=0.254 Sum_probs=170.2
Q ss_pred CCceEEEEecCCcccCCch-HHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHH----------hhcCCCCCCHH-
Q 001380 77 GKVSAVLFDMDGVLCNSEE-PSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVA----------SVKGVKGFDSE- 144 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~- 144 (1089)
+++|+|+||+||||+++.. .+..++.++++++|+....+.+....+.........+. ...+... ...
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 82 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLP-TEAD 82 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCC-CHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCC-CHHH
Confidence 3589999999999999887 67889999999999988877777777776554433321 1122211 222
Q ss_pred --HHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCc-cEEEEcCCccCC
Q 001380 145 --AAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMF-DAIVSADAFENL 221 (1089)
Q Consensus 145 --~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~f-d~i~~~~~~~~~ 221 (1089)
.....+.+.+...+... ..++||+.++++.|+++|++++++||.....++..++.+++. .+| +.++++++....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~ 159 (267)
T 1swv_A 83 IQEMYEEFEEILFAILPRY--ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ-GYKPDFLVTPDDVPAG 159 (267)
T ss_dssp HHHHHHHHHHHHHHHGGGG--CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT-TCCCSCCBCGGGSSCC
T ss_pred HHHHHHHHHHHHHHhhccc--cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-ccChHheecCCccCCC
Confidence 22233333333333222 368999999999999999999999999999999999999886 775 999999989999
Q ss_pred CCCHHHHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCeEEEEcCCCC------------------------HHHHhh
Q 001380 222 KPAPDIFLSASKILNVPT-SECIVIEDALAGVQAAKAAQMRCIAVTTTLS------------------------EERLKE 276 (1089)
Q Consensus 222 KP~~~~~~~~l~~lgv~p-~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~------------------------~~~l~~ 276 (1089)
||++..|..+++++|+++ ++|++|||+.+|+++|+.+|+.+++|.+|.. .+++..
T Consensus 160 kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T 1swv_A 160 RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVE 239 (267)
T ss_dssp TTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHh
Confidence 999999999999999999 9999999999999999999999999999864 455667
Q ss_pred cCCcEEecCcccCCHHHHHhc
Q 001380 277 ASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 277 ~~~d~vi~dl~el~i~~ll~~ 297 (1089)
.+|++++.++.++ .++|..
T Consensus 240 ~~ad~v~~~~~el--~~~l~~ 258 (267)
T 1swv_A 240 NGAHFTIETMQEL--ESVMEH 258 (267)
T ss_dssp TTCSEEESSGGGH--HHHHHH
T ss_pred cCCceeccCHHHH--HHHHHH
Confidence 7899999999998 566543
No 64
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.88 E-value=6.6e-21 Score=233.10 Aligned_cols=210 Identities=19% Similarity=0.290 Sum_probs=174.2
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
.++..|.+|++|+.+++|||+|..+++|.+++.+|.....+...+ +..|.|||+|+.++.|||+|..
T Consensus 34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g-------------~~~P~GlAvD~~~~~LY~tD~~ 100 (628)
T 4a0p_A 34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG-------------LDYPEGMAVDWLGKNLYWADTG 100 (628)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-------------CSCCCEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-------------CCCcceEEEEeCCCEEEEEECC
Confidence 467889999999989999999999999999999987555444321 4589999999887789999999
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEEEeCC
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRAFSGD 756 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~~~g~ 756 (1089)
+++|.+++++++..+++... .+..|.+|+++|..+.||++|++ +++|++++.++...+.+.
T Consensus 101 ~~~I~v~~~dG~~~~~l~~~----------------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-- 162 (628)
T 4a0p_A 101 TNRIEVSKLDGQHRQVLVWK----------------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-- 162 (628)
T ss_dssp TTEEEEEETTSTTCEEEECS----------------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE--
T ss_pred CCEEEEEecCCCcEEEEEeC----------------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE--
Confidence 99999999988777666521 25689999999988899999987 789999999877666664
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l 836 (1089)
..+.+|+||++|+++++|||+|..+++|.+++++++..+++.. .+
T Consensus 163 -------------~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~----------------------~l 207 (628)
T 4a0p_A 163 -------------PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD----------------------DL 207 (628)
T ss_dssp -------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE----------------------CC
T ss_pred -------------CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeec----------------------cC
Confidence 2356899999999888999999999999999998766554432 26
Q ss_pred cCceEEEEccCCcEEEEeCCCCEEEEEeCCCCe-EEEEe
Q 001380 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR-VSTLA 874 (1089)
Q Consensus 837 ~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~-v~t~~ 874 (1089)
.+|.||+++. ++|||+|+.+++|.++|..++. .+.+.
T Consensus 208 ~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 208 PHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp SCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 7999999985 7999999999999999976553 34443
No 65
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=99.88 E-value=5.3e-22 Score=212.58 Aligned_cols=210 Identities=18% Similarity=0.136 Sum_probs=163.7
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHh---Hhhh----------cCCCHH---HHHHHHHhhcCCCCC
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVED---FLPF----------MGTGEA---NFLGGVASVKGVKGF 141 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~---~~~~----------~~~~~~---~~~~~~~~~~~~~~~ 141 (1089)
|+|+|+||+||||+++...+..++.++++++|....... +... .+.... .+...+....+..
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-- 80 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVD-- 80 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCC--
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCC--
Confidence 479999999999999998888999999999987744322 2211 133433 3444444444432
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCC---hHhHHHHHHHCCCCCCCccEEEEcCCc
Q 001380 142 DSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD---RIKVDANLAAAGLPVSMFDAIVSADAF 218 (1089)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~---~~~~~~~l~~~gl~~~~fd~i~~~~~~ 218 (1089)
. .....+.+.+...+... .++|++.++|+.|+++|++++++||.. ...++..++.+++. .+|+.++++++.
T Consensus 81 -~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~ 154 (235)
T 2om6_A 81 -V-ELVKRATARAILNVDES---LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM-EFIDKTFFADEV 154 (235)
T ss_dssp -H-HHHHHHHHHHHHHCCGG---GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG-GGCSEEEEHHHH
T ss_pred -H-HHHHHHHHHHHHhcccc---CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH-HHhhhheecccc
Confidence 1 22223333444433322 469999999999999999999999998 88899999999996 999999999999
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 219 ENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 219 ~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
...||++++|..+++++|++|++|++|||+. +|+++|+.+|+.++++.++....++. ..+++++.++.++ .++|..
T Consensus 155 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~-~~~~~~~~~~~el--~~~l~~ 231 (235)
T 2om6_A 155 LSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKL-EERGFEIPSIANL--KDVIEL 231 (235)
T ss_dssp TCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEE-ETTEEEESSGGGH--HHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccC-CCCcchHhhHHHH--HHHHHH
Confidence 9999999999999999999999999999999 99999999999999999885433333 3589999999997 566644
Q ss_pred c
Q 001380 298 G 298 (1089)
Q Consensus 298 ~ 298 (1089)
.
T Consensus 232 ~ 232 (235)
T 2om6_A 232 I 232 (235)
T ss_dssp T
T ss_pred H
Confidence 3
No 66
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=1.1e-20 Score=209.01 Aligned_cols=240 Identities=21% Similarity=0.316 Sum_probs=183.7
Q ss_pred CEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCC
Q 001380 623 NRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGS 702 (1089)
Q Consensus 623 ~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~ 702 (1089)
++..+....+.+...+|..|.. +..|..|.+|+++++|+ +||+|..+++|+++++++..+..+...+..
T Consensus 4 ~~~~~~~~~~~~~~~~g~~g~~--------~g~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~-- 72 (286)
T 1q7f_A 4 MKSQIKRQRMIYHCKFGEFGVM--------EGQFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEGRFKFQFGECGKR-- 72 (286)
T ss_dssp ----CCCEEECEEEEECCBSSS--------TTCBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTSCEEEEECCBSSS--
T ss_pred cccccccceeEEEEeccCCCCC--------CCccCCCceEEECCCCC-EEEEECCCCEEEEECCCCcEEEEecccCCC--
Confidence 3444444557778888776432 45688999999999998 999999999999999987777766532211
Q ss_pred CCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEc
Q 001380 703 DYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS 781 (1089)
Q Consensus 703 ~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~ 781 (1089)
...+..|+++++++.++.|||++.+ ++.|++|+..+..+..+.. ..+..|.+|+++
T Consensus 73 ---------~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~--------------~~~~~~~~i~~~ 129 (286)
T 1q7f_A 73 ---------DSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGA--------------TILQHPRGVTVD 129 (286)
T ss_dssp ---------TTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECT--------------TTCSCEEEEEEC
T ss_pred ---------cccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecC--------------ccCCCceEEEEe
Confidence 1235689999996445599999975 8999999976655555531 234579999999
Q ss_pred CCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEE
Q 001380 782 PDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIK 861 (1089)
Q Consensus 782 ~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~ 861 (1089)
++| ++||++..+++|+++++++.....+... ..+..|.+|+++++|++||++..+++|+
T Consensus 130 ~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~--------------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 130 NKG-RIIVVECKVMRVIIFDQNGNVLHKFGCS--------------------KHLEFPNGVVVNDKQEIFISDNRAHCVK 188 (286)
T ss_dssp TTS-CEEEEETTTTEEEEECTTSCEEEEEECT--------------------TTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred CCC-CEEEEECCCCEEEEEcCCCCEEEEeCCC--------------------CccCCcEEEEECCCCCEEEEECCCCEEE
Confidence 998 7999999999999999875444333210 1256799999999999999999999999
Q ss_pred EEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCC-EEEEEeCCCCCceEEEEe
Q 001380 862 KLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN-IIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 862 ~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~-~I~~~~~~~~~~~~~~l~ 931 (1089)
++|+++..+.++...+ .+..|.+|++|++|+|||++..++ +|.+++.++. .+.++.
T Consensus 189 ~~~~~g~~~~~~~~~g------------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~--~~~~~~ 245 (286)
T 1q7f_A 189 VFNYEGQYLRQIGGEG------------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ--LISALE 245 (286)
T ss_dssp EEETTCCEEEEESCTT------------TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC--EEEEEE
T ss_pred EEcCCCCEEEEEccCC------------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC--EEEEEc
Confidence 9999887777775321 357799999999999999999886 9999998776 556655
No 67
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=99.88 E-value=4.3e-22 Score=217.67 Aligned_cols=212 Identities=19% Similarity=0.305 Sum_probs=155.7
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHH----cCCCCCHHhH-----hhhcC-------CCHHHHH----H-HHHhh
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAE----MGVEVTVEDF-----LPFMG-------TGEANFL----G-GVASV 135 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~----~g~~~~~~~~-----~~~~~-------~~~~~~~----~-~~~~~ 135 (1089)
.++++|+||+||||+|+...+..++.+++++ +|+......+ ....+ .+...+. . .+...
T Consensus 16 ~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQET 95 (260)
T ss_dssp CCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHh
Confidence 4689999999999999999988898888774 4554422111 11111 1222111 1 11111
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEc
Q 001380 136 KGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSA 215 (1089)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~ 215 (1089)
.+.. .......++.+.+....... ..++||+.++|+.|++ +++++|+||.....++..++.+|+. .+|+.++++
T Consensus 96 ~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~-~~f~~i~~~ 169 (260)
T 2gfh_A 96 KGGA--DNRKLAEECYFLWKSTRLQH--MILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ-SYFDAIVIG 169 (260)
T ss_dssp HCSS--CCHHHHHHHHHHHHHHHHHT--CCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG-GGCSEEEEG
T ss_pred cCcc--chHHHHHHHHHHHHHHHHhc--CCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH-hhhheEEec
Confidence 1111 12233333434333322222 3789999999999998 4999999999999999999999996 999999999
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCC-eEEEEcCCCCHHHHhhcCCcEEecCcccCCHHH
Q 001380 216 DAFENLKPAPDIFLSASKILNVPTSECIVIEDA-LAGVQAAKAAQM-RCIAVTTTLSEERLKEASPSLIRKEIGSVSLND 293 (1089)
Q Consensus 216 ~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~-~~Di~aA~~aG~-~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ 293 (1089)
+++...||+|++|..+++++|++|++|+||||+ .+|+++|+++|| .+++|.++..........|++++.++.++ .+
T Consensus 170 ~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el--~~ 247 (260)
T 2gfh_A 170 GEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL--PA 247 (260)
T ss_dssp GGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH--HH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHH--HH
Confidence 999999999999999999999999999999996 799999999999 89999876433333456799999999998 55
Q ss_pred HHh
Q 001380 294 ILT 296 (1089)
Q Consensus 294 ll~ 296 (1089)
++.
T Consensus 248 ~l~ 250 (260)
T 2gfh_A 248 LLQ 250 (260)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 68
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.87 E-value=2.3e-22 Score=198.41 Aligned_cols=133 Identities=13% Similarity=0.197 Sum_probs=113.6
Q ss_pred ccCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 422 ENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 422 ~~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
+...+|+++|+|++ +.+|+.+++ ++++||++||+||++||++|+.++|.|++++++|+++++.+|+|++ +.
T Consensus 5 ~~l~~G~~~P~f~l---~~~g~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~-----d~ 75 (143)
T 4fo5_A 5 EGVNPGDLAPRIEF---LGNDAKASF-HNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISM-----DE 75 (143)
T ss_dssp BSSSTTSBCCCCCC--------CCCS-CCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEEC-----CS
T ss_pred cccCCcccCCceEE---cCCCCEEEH-HHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEc-----cC
Confidence 35679999999996 459999999 8999999999999999999999999999999999988999999986 45
Q ss_pred cHHHHHHHHHHcCCcc-ceeecCC---hhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 502 DLEAIRNAVLRYGISH-PVVNDGD---MNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~~~-~v~~d~~---~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
+.+.+++++++++++| +++.|.. .++++.|+|.++|++||||++|+|+++..+ .+++++.|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~ 141 (143)
T 4fo5_A 76 KESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAANVT---PEKLTEILK 141 (143)
T ss_dssp CHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEESCC---HHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEccCC---HHHHHHHHH
Confidence 6889999999999999 7888873 579999999999999999999999998653 455655553
No 69
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=99.87 E-value=1.2e-21 Score=209.21 Aligned_cols=209 Identities=23% Similarity=0.325 Sum_probs=171.2
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCC-HHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVT-VEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+++...+..++.++++++|.... .+.+..+.+.....+...+....+.... ......+.+.+.+
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 80 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLS--ASLLDKSEKLLDM 80 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCC--THHHHHHHHHHHH
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCC--HHHHHHHHHHHHH
Confidence 479999999999999999888999999999999877 4556667788877777777666654321 2233334444433
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCc-cEEEEcCCccCC--CCCHHHHHHHHH
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMF-DAIVSADAFENL--KPAPDIFLSASK 233 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~f-d~i~~~~~~~~~--KP~~~~~~~~l~ 233 (1089)
.+... ..++||+.++++.|+. +++|+||.....++..++++++. .+| +.++++++...+ ||++..|+++++
T Consensus 81 ~~~~~--~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~ 154 (229)
T 2fdr_A 81 RLERD--VKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLK-PYFAPHIYSAKDLGADRVKPKPDIFLHGAA 154 (229)
T ss_dssp HHHHH--CCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCG-GGTTTCEEEHHHHCTTCCTTSSHHHHHHHH
T ss_pred HhhcC--CccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChH-HhccceEEeccccccCCCCcCHHHHHHHHH
Confidence 33222 2678999999998875 89999999999999999999996 999 999999988889 999999999999
Q ss_pred HcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCC-----HHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 234 ILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLS-----EERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 234 ~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~-----~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
++|++++++++|||+.+|+.+|+.+|+.++++.++.. .+++++.+|++++.++.++ .++|.
T Consensus 155 ~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el--~~~l~ 220 (229)
T 2fdr_A 155 QFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL--PAVIA 220 (229)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH--HHHHH
T ss_pred HcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHH--HHHHH
Confidence 9999999999999999999999999999999998754 2457777799999999987 55554
No 70
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.87 E-value=4.5e-22 Score=197.12 Aligned_cols=145 Identities=25% Similarity=0.423 Sum_probs=133.2
Q ss_pred CCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHH
Q 001380 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLE 504 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~ 504 (1089)
.+|+++|+|++.+.+++|+.+++ ++++||++||+||++||++|+.++|.|++++++|+++ +.+++|+++......+.+
T Consensus 2 ~~g~~~P~f~~~~~~~~g~~~~~-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~ 79 (148)
T 2b5x_A 2 KLRQPMPELTGEKAWLNGEVTRE-QLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPG 79 (148)
T ss_dssp CTTCBCCCCCCCSEEESCCCCHH-HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHH
T ss_pred CCCCCCCCCccccccccCcccch-hhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCHH
Confidence 57999999997656789999999 8899999999999999999999999999999999877 999999886555555899
Q ss_pred HHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 505 AIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 505 ~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
.+++++++++++|+++.|.+.++++.|+|.++|+++++|++|+++.++.|..+.+.+.+.|+++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 80 KIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp HHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999988889999999888763
No 71
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.87 E-value=2.2e-22 Score=198.18 Aligned_cols=133 Identities=11% Similarity=0.144 Sum_probs=119.3
Q ss_pred CCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHH---HHHHcCCCCEEEEEEeCCCCCChh
Q 001380 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF---LEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~---l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
++|+++|+|++. +++|+.+++ ++++||++||+||++||++|+.++|.|.+ ++++|++.++.+|+|++ ++
T Consensus 2 ~~G~~~p~f~l~--~~~g~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~-----d~ 73 (142)
T 3ewl_A 2 NAGMKAADFTYV--TVHGDNSRM-SRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYP-----DE 73 (142)
T ss_dssp CTTSBCCCCEEE--CTTCCEEEG-GGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEEC-----SS
T ss_pred CCCCcCCCCEEE--CCCCCEEEh-hhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEe-----cC
Confidence 589999999964 569999999 89999999999999999999999999998 99999888899999976 46
Q ss_pred cHHHHHHHHHHcCCccceeecCChhHHH--HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 502 DLEAIRNAVLRYGISHPVVNDGDMNLWR--ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~~~~v~~d~~~~l~~--~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+.+.+++++++++++|+++.|.+..+.. .|+|.++|+++|||++|++++. ..+.++++++|++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 74 NREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK---DTSMEQLIDYLATQ 139 (142)
T ss_dssp CHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC---SCCHHHHHHHHHC-
T ss_pred CHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec---CCCHHHHHHHHHHH
Confidence 7889999999999999999999999977 9999999999999999999873 45677777777654
No 72
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.87 E-value=2.7e-22 Score=197.73 Aligned_cols=133 Identities=10% Similarity=0.132 Sum_probs=118.8
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHH---HHHHcCCCCEEEEEEeCCCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF---LEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~---l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
...+|+++|+|++. +.+|+.+++ ++++||++||+||++||++|+.++|.|++ ++++|++.++.+|+|+.
T Consensus 4 ~~~~G~~ap~f~l~--~~~g~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~----- 75 (142)
T 3eur_A 4 KNRLGTKALNFTYT--LDSGVKGTL-YQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYP----- 75 (142)
T ss_dssp TTCTTSBCCCCEEE--ETTSCEEET-TTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEEC-----
T ss_pred hhcCCCccCCcEEE--cCCCCEeeH-HHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEc-----
Confidence 45789999999965 459999999 99999999999999999999999999999 99999888999999976
Q ss_pred hhcHHHHHHHHHHcCCccceeecCChh--HHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 500 EKDLEAIRNAVLRYGISHPVVNDGDMN--LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~v~~d~~~~--l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
+++.+.+++++++++++|+.+.|.+.. +++.|+|.++|++||||++|+|+++..+ .++++++|+
T Consensus 76 d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~ 141 (142)
T 3eur_A 76 DEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLA 141 (142)
T ss_dssp SSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHH
T ss_pred CCCHHHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCCC---HHHHHHHHh
Confidence 567789999999999999999998765 7899999999999999999999998764 466666654
No 73
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.87 E-value=1.1e-21 Score=205.18 Aligned_cols=201 Identities=17% Similarity=0.222 Sum_probs=165.2
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcC-CCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMG-TGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+++...+..++.++++++|+......+....+ .+...+...+...... . ......+.+.+.+
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~ 78 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL---D-VEVLNQVRAQSLA 78 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTC---C-HHHHHHHHHHHHT
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhc---c-HHHHHHHHHHHHH
Confidence 579999999999999999898999999999999888777777777 6666666555422222 1 2333344444333
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcC
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILN 236 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lg 236 (1089)
.+.. ...++|++.++|+.|+++|++++++||......+ .++.+++. .+|+.++++++....||++.+|..+++++|
T Consensus 79 ~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 154 (207)
T 2go7_A 79 EKNA--QVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVE-SYFTEILTSQSGFVRKPSPEAATYLLDKYQ 154 (207)
T ss_dssp TCGG--GCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCG-GGEEEEECGGGCCCCTTSSHHHHHHHHHHT
T ss_pred hccc--cceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCch-hheeeEEecCcCCCCCCCcHHHHHHHHHhC
Confidence 2222 2367999999999999999999999999988888 99999996 899999999999999999999999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHH
Q 001380 237 VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDIL 295 (1089)
Q Consensus 237 v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll 295 (1089)
++++++++|||+.+|+.+|+.+|+.++++.++. . .|++++.++.++ .++|
T Consensus 155 i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~------~a~~v~~~~~el--~~~l 204 (207)
T 2go7_A 155 LNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y------EGNHRIQALADI--SRIF 204 (207)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C------TTEEECSSTTHH--HHHT
T ss_pred CCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C------CCCEEeCCHHHH--HHHH
Confidence 999999999999999999999999999998875 2 689999999887 4444
No 74
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.87 E-value=3.5e-22 Score=199.03 Aligned_cols=140 Identities=26% Similarity=0.406 Sum_probs=127.5
Q ss_pred CCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHH
Q 001380 426 TTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEA 505 (1089)
Q Consensus 426 ~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~ 505 (1089)
+|+++|+|++ .+.+|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+++|++ +++.+.
T Consensus 2 ~G~~~p~~~l--~~~~g~~~~l-~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~-----d~~~~~ 73 (151)
T 2f9s_A 2 EGSDAPNFVL--EDTNGKRIEL-SDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNV-----GESKIA 73 (151)
T ss_dssp CCEECCCCEE--ECTTCCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-----SCCHHH
T ss_pred CCCcCCccee--EcCCCCEEEH-HHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEC-----CCCHHH
Confidence 6889999995 4569999999 8999999999999999999999999999999999887899999976 346688
Q ss_pred HHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 506 IRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 506 ~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
+++++++++++|+++.|.+..+++.|+|.++|++++||++|+++.++.|..+.+.+.+.|+.+++...
T Consensus 74 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 74 VHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp HHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred HHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999899999999888776544
No 75
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.87 E-value=1.2e-22 Score=205.08 Aligned_cols=138 Identities=11% Similarity=0.149 Sum_probs=118.6
Q ss_pred CCCCCCCCCCccccCCCCCceeeccccc--CCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDL--KGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~--~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~ 500 (1089)
.++|+++|+|++. +.+|++++| +++ +||++||+|| ++||++|+.++|.|++++++|++.++.+|+||.
T Consensus 5 l~vG~~aPdF~l~--~~~G~~v~L-sd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~------ 75 (164)
T 4gqc_A 5 VELGEKAPDFTLP--NQDFEPVNL-YEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISV------ 75 (164)
T ss_dssp CCTTSBCCCCEEE--BTTSCEEEH-HHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEES------
T ss_pred ccCCCCCcCcEeE--CCCCCEEEH-HHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecC------
Confidence 5789999999964 569999999 887 8999999998 999999999999999999999999999999985
Q ss_pred hcHHHHHHHHHHcCCccceeecCChhHHHHhCCC----------ceeEEEEECCCCcEEEEecCCC-----chhhHHHHH
Q 001380 501 KDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVN----------SWPTFAVVGPNGKLLAQLAGEG-----HRKDLDDLV 565 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~----------~~Pt~~lid~~G~i~~~~~G~~-----~~~~l~~~l 565 (1089)
++++.+++|+++++++||++.|++++++++|||. ..|++||||++|+|++.+.+.. +.+++.+.+
T Consensus 76 d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l 155 (164)
T 4gqc_A 76 DSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREA 155 (164)
T ss_dssp SCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHhcCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHH
Confidence 5778899999999999999999999999999984 4689999999999999876532 334444444
Q ss_pred HHHHH
Q 001380 566 EAALL 570 (1089)
Q Consensus 566 ~~~l~ 570 (1089)
++++.
T Consensus 156 ~~l~~ 160 (164)
T 4gqc_A 156 NKIAG 160 (164)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 44444
No 76
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=99.87 E-value=7.6e-22 Score=214.41 Aligned_cols=213 Identities=18% Similarity=0.264 Sum_probs=159.3
Q ss_pred CCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhh-hcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 001380 76 WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLP-FMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIY 154 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (1089)
.|++|+|+||+||||+++...+..++.++++++|+.....++.. +.+.....+ ..+... ............+....+
T Consensus 19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (254)
T 3umc_A 19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAM-DRVRNG-QAPWQHLDQLHRQSLEAL 96 (254)
T ss_dssp SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHH-HHHHTT-SSCCCCHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHhcc-cCCcccHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999876654422 222111111 111110 111112222222222222
Q ss_pred HHHhcC-------------CCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCC
Q 001380 155 LDKYAK-------------PNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENL 221 (1089)
Q Consensus 155 ~~~~~~-------------~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~ 221 (1089)
.+.+.. .....++||+.++|+.|++. ++++|+||.....++..++.+|+. |+.++++++....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~~~~~~~~~~~ 172 (254)
T 3umc_A 97 AGEFGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDMLLCADLFGHY 172 (254)
T ss_dssp HHHTTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSEECCHHHHTCC
T ss_pred HHHhCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cceEEeecccccC
Confidence 111111 01236799999999999996 999999999999999999999984 9999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEc----CCC-CHHHH-hhcCCcEEecCcccCCHHHHH
Q 001380 222 KPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVT----TTL-SEERL-KEASPSLIRKEIGSVSLNDIL 295 (1089)
Q Consensus 222 KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~----~g~-~~~~l-~~~~~d~vi~dl~el~i~~ll 295 (1089)
||++.+|+.+++++|++|++|++|||+.+|+++|+++|+.+++++ +|. ..+++ ....||++++++.+| .++|
T Consensus 173 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el--~~~l 250 (254)
T 3umc_A 173 KPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDL--HRQL 250 (254)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHH--HHHH
T ss_pred CCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHH--HHHh
Confidence 999999999999999999999999999999999999999999999 555 44454 356899999999998 6665
Q ss_pred h
Q 001380 296 T 296 (1089)
Q Consensus 296 ~ 296 (1089)
.
T Consensus 251 ~ 251 (254)
T 3umc_A 251 A 251 (254)
T ss_dssp H
T ss_pred c
Confidence 4
No 77
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=99.87 E-value=1.6e-21 Score=211.51 Aligned_cols=214 Identities=17% Similarity=0.209 Sum_probs=160.1
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
+++|+|+||+||||+++...+..++.++++++|+.....++...+..........+..... ...............+.+
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 91 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAR-EFVTLDILHRENLDFVLR 91 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSS-CCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999877655433221121111111111100 011111222222222211
Q ss_pred HhcC----------------CCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccC
Q 001380 157 KYAK----------------PNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFEN 220 (1089)
Q Consensus 157 ~~~~----------------~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~ 220 (1089)
.+.. .....++||+.++|+.|+++ ++++|+||.....++..++.+|+. |+.++++++...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~---f~~~~~~~~~~~ 167 (254)
T 3umg_A 92 ESGIDPTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP---WDVIIGSDINRK 167 (254)
T ss_dssp HTTCCGGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC---CSCCCCHHHHTC
T ss_pred HhCCCcCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC---eeEEEEcCcCCC
Confidence 1111 01336899999999999997 999999999999999999999985 899999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEc----CCC-CHHHH-hhcCCcEEecCcccCCHHHH
Q 001380 221 LKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVT----TTL-SEERL-KEASPSLIRKEIGSVSLNDI 294 (1089)
Q Consensus 221 ~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~----~g~-~~~~l-~~~~~d~vi~dl~el~i~~l 294 (1089)
.||++.+|+.+++++|+++++|++|||+.+|+++|+++|+.+++++ +|. ..+++ ....||+++.++.+| ..+
T Consensus 168 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el--~~~ 245 (254)
T 3umg_A 168 YKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDL--AAQ 245 (254)
T ss_dssp CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHH--HHH
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHH--HHH
Confidence 9999999999999999999999999999999999999999999999 555 34444 457899999999998 666
Q ss_pred Hhc
Q 001380 295 LTG 297 (1089)
Q Consensus 295 l~~ 297 (1089)
|..
T Consensus 246 l~~ 248 (254)
T 3umg_A 246 LRA 248 (254)
T ss_dssp HHH
T ss_pred hcC
Confidence 654
No 78
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.87 E-value=7.2e-22 Score=199.17 Aligned_cols=133 Identities=18% Similarity=0.196 Sum_probs=119.0
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCE-EEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKV-VVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~-vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
..+|+++|+|++. +.+|+++++ ++++||+ +||+|| ++||++|+.++|.|++++++|+++++.+|+|++ +
T Consensus 2 l~~G~~~P~f~l~--~~~G~~~~l-~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~------d 72 (161)
T 3drn_A 2 VKVGDKAPLFEGI--ADNGEKISL-SDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSS------D 72 (161)
T ss_dssp CCTTSBCCCCEEE--ETTSCEEEG-GGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEES------C
T ss_pred CCCCCcCCCeEee--cCCCCEEEH-HHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeC------C
Confidence 4689999999965 569999999 9999997 999999 999999999999999999999988999999986 4
Q ss_pred cHHHHHHHHHHcCCccceeecCChhHHHHhCCCc----eeEEEEECCCCcEEEEecCCC-chhhHHHHH
Q 001380 502 DLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNS----WPTFAVVGPNGKLLAQLAGEG-HRKDLDDLV 565 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~----~Pt~~lid~~G~i~~~~~G~~-~~~~l~~~l 565 (1089)
+.+.+++|+++++++|+++.|.+.++++.|++.+ +|++||||++|+|++.+.|.. ..+.+++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il 141 (161)
T 3drn_A 73 DINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEAL 141 (161)
T ss_dssp CHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHH
T ss_pred CHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHH
Confidence 6789999999999999999999999999999999 999999999999999999843 333344433
No 79
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=99.87 E-value=3.4e-22 Score=218.44 Aligned_cols=124 Identities=12% Similarity=0.131 Sum_probs=110.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHC---CCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCC
Q 001380 164 GIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAA---GLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTS 240 (1089)
Q Consensus 164 ~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~---gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~ 240 (1089)
..++||+.++|+.|+++|++++|+||+.....+..++.+ |+. .+||.++++ +++ .||+|++|+.+++++|++|+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~-~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-KIG-HKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGG
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChH-hhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcc
Confidence 478999999999999999999999999999899988854 585 999999999 788 99999999999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccCC
Q 001380 241 ECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSVS 290 (1089)
Q Consensus 241 ~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el~ 290 (1089)
+|+||||+.+|+.+|+++||++++|.++. ...+.....|++++.++.++.
T Consensus 206 ~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 206 NILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred cEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 99999999999999999999999998743 332333346899999999984
No 80
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=99.87 E-value=5.3e-22 Score=213.11 Aligned_cols=205 Identities=19% Similarity=0.211 Sum_probs=159.2
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcC------------CCH----HHHHHHHHhhcCCCC
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMG------------TGE----ANFLGGVASVKGVKG 140 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~ 140 (1089)
+++|+|+||+||||+++...+..++.++++++|+..+.+++...+. ... ......+....+...
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEP 83 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCC
T ss_pred ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCC
Confidence 4589999999999999999999999999999999988776654332 111 122233333344331
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccC
Q 001380 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFEN 220 (1089)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~ 220 (1089)
. ... .+.+...+. ...++||+.++|+.|++ |++++|+||.....++..++. +. .+||.+++++++..
T Consensus 84 -~-~~~----~~~~~~~~~---~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~-~~fd~i~~~~~~~~ 150 (240)
T 3smv_A 84 -D-AAE----REEFGTSVK---NWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LG-VEFDHIITAQDVGS 150 (240)
T ss_dssp -C-HHH----HHHHHTGGG---GCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TC-SCCSEEEEHHHHTS
T ss_pred -C-HHH----HHHHHHHHh---cCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cC-CccCEEEEccccCC
Confidence 1 222 222322222 23789999999999999 799999999999888888887 54 77999999999999
Q ss_pred CCCCHHHHHHH---HHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-------CHHHHhhcCCcEEecCcccC
Q 001380 221 LKPAPDIFLSA---SKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-------SEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 221 ~KP~~~~~~~~---l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-------~~~~l~~~~~d~vi~dl~el 289 (1089)
.||++++|..+ ++++|++|++|+||||+. +|+++|+++|+.+++++++. ..+......|+++++++.++
T Consensus 151 ~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el 230 (240)
T 3smv_A 151 YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM 230 (240)
T ss_dssp CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHH
Confidence 99999999999 899999999999999997 99999999999999998651 22345557899999999987
Q ss_pred CHHHHHh
Q 001380 290 SLNDILT 296 (1089)
Q Consensus 290 ~i~~ll~ 296 (1089)
.++|.
T Consensus 231 --~~~l~ 235 (240)
T 3smv_A 231 --AEAHK 235 (240)
T ss_dssp --HHHHH
T ss_pred --HHHHH
Confidence 44443
No 81
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.7e-21 Score=214.87 Aligned_cols=204 Identities=25% Similarity=0.272 Sum_probs=167.3
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHh-HhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVED-FLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYL 155 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (1089)
+++|+|+||+||||+++...+..++.++++++|. ....+ +....+.......+.+.... ........+.+.+.
T Consensus 33 m~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~~~~~~~~~G~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 106 (275)
T 2qlt_A 33 LKINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIHISHGWRTYDAIAKFAPDF-----ADEEYVNKLEGEIP 106 (275)
T ss_dssp EEESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCHHHHHHHCTTCCHHHHHHHHCGGG-----CCHHHHHHHHHTHH
T ss_pred ccCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCHHHHHHHhcCCCHHHHHHHHhccC-----CcHHHHHHHHHHHH
Confidence 3589999999999999999999999999998884 33333 34445666665555544321 22334444555554
Q ss_pred HHhcCCCCCCCCccHHHHHHHHHhC-CCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHH
Q 001380 156 DKYAKPNSGIGFPGALELINQCKSK-GLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKI 234 (1089)
Q Consensus 156 ~~~~~~~~~~~~pG~~~lL~~Lk~~-Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~ 234 (1089)
+.+... ..++||+.++|+.|++. |++++|+||.....++..++.+++. +|+.++++++....||++++|+.++++
T Consensus 107 ~~~~~~--~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~~i~~~~~~~~~kp~~~~~~~~~~~ 182 (275)
T 2qlt_A 107 EKYGEH--SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPEYFITANDVKQGKPHPEPYLKGRNG 182 (275)
T ss_dssp HHHCTT--CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCSSEECGGGCSSCTTSSHHHHHHHHH
T ss_pred HHHhcC--CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccCEEEEcccCCCCCCChHHHHHHHHH
Confidence 444333 36899999999999999 9999999999999999999999985 489999999899999999999999999
Q ss_pred cCC-------CCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCC
Q 001380 235 LNV-------PTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS 290 (1089)
Q Consensus 235 lgv-------~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~ 290 (1089)
+|+ ++++|++|||+.+|+++|+++|+.+++|.++...+++.+..|++++.++.++.
T Consensus 183 lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 183 LGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp TTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred cCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 999 99999999999999999999999999999988777777778999999999983
No 82
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.86 E-value=1.4e-21 Score=195.07 Aligned_cols=138 Identities=25% Similarity=0.332 Sum_probs=124.2
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcH
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDL 503 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~ 503 (1089)
..+|+++|+|++ .+++|+.+++ ++++||++||+||++||++|+.++|.|++++++|+++++.+++|++ +++.
T Consensus 3 l~~g~~~p~f~l--~~~~G~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~-----d~~~ 74 (152)
T 2lrn_A 3 LATGSVAPAITG--IDLKGNSVSL-NDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVST-----DRRE 74 (152)
T ss_dssp SCTTEECCCCEE--ECSSSCEEES-GGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEEC-----CSCH
T ss_pred ccCCCcCCCcee--EcCCCCEEeH-HHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEc-----cCCH
Confidence 468999999995 4569999999 8999999999999999999999999999999999988899999976 3567
Q ss_pred HHHHHHHHHcCCccceeecC---ChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHh
Q 001380 504 EAIRNAVLRYGISHPVVNDG---DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 504 ~~~~~~~~~~~~~~~v~~d~---~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
+.+++++++++++|+++.|. +.++++.|+|.++|+++|||++|+++.++. ..+++.+.|+++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 75 EDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVNGA 143 (152)
T ss_dssp HHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHTSS
T ss_pred HHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHhhc
Confidence 89999999999999999998 789999999999999999999999999864 4567888888877643
No 83
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.4e-21 Score=220.03 Aligned_cols=150 Identities=27% Similarity=0.529 Sum_probs=138.3
Q ss_pred cCCCCCCCCCCccc---cCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 423 NRKTTPIVPEFPAK---LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~---~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
...+|.++|+|+.. +.+.+|+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.||+|+++.+..
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsL-sdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~ 128 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDL-KSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAF 128 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGG
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcH-HHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccc
Confidence 46789999999932 23458999999 899999999999999999999999999999999998889999999877666
Q ss_pred hhcHHHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 500 EKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
+++.+.+++++++++++||++.|.+.++++.|+|.++|++||||++|+++.++.|....+.+.+.|++++++..
T Consensus 129 ~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e~~ 202 (352)
T 2hyx_A 129 EKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAK 202 (352)
T ss_dssp GGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhhcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999998765
No 84
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=1.1e-20 Score=214.27 Aligned_cols=230 Identities=15% Similarity=0.247 Sum_probs=173.0
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCC--EEEEEecCCCCCCCCCCCCccccCCcceeEEee-CCCEEEEE
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGN--FIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA-KKNLLYVA 674 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~--~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~-~g~~lyVa 674 (1089)
..+..|.+|++++ +|+|||+|..+++|.+++.+|+ .+..++..+..|.. ...+..|.+|++++ +|+ |||+
T Consensus 88 ~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~-----~~~~~~P~~ia~~~~~g~-lyv~ 160 (329)
T 3fvz_A 88 NLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSD-----QNHFCQPTDVAVEPSTGA-VFVS 160 (329)
T ss_dssp TTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCS-----TTCCSSEEEEEECTTTCC-EEEE
T ss_pred CccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCC-----ccccCCCcEEEEeCCCCe-EEEE
Confidence 4578999999997 8889999999999999999988 67777765444432 34688999999999 676 9999
Q ss_pred EC-CCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCe-EEE
Q 001380 675 DT-ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV-TRA 752 (1089)
Q Consensus 675 D~-~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~-~~~ 752 (1089)
|+ .+++|++++.++..+.++...|.. .......+..|++|+++++++.|||++.++++|++|++.+|. +..
T Consensus 161 d~~~~~~I~~~~~~g~~~~~~~~~g~~-------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 161 DGYCNSRIVQFSPSGKFVTQWGEESSG-------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp ECSSCCEEEEECTTSCEEEEECEECCS-------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred eCCCCCeEEEEcCCCCEEEEeccCCCC-------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 97 799999999877777777544421 112234578999999999967999999999999999998554 445
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
+...+. +.... .-...| |++++.+| .+||++..+++|++++..++......+. .
T Consensus 234 ~~~~~~-----~~~~~-~~~~~p-g~~~~~~g-~~~v~~~~~~~v~~~~~~~g~~~~~~~~------------------~ 287 (329)
T 3fvz_A 234 IKHASF-----GRNVF-AISYIP-GFLFAVNG-KPYFGDQEPVQGFVMNFSSGEIIDVFKP------------------V 287 (329)
T ss_dssp ECCTTT-----TTCEE-EEEEET-TEEEEEEC-CCCTTCSCCCCEEEEETTTCCEEEEECC------------------S
T ss_pred Eecccc-----CCCcc-eeeecC-CEEEEeCC-CEEeccCCCcEEEEEEcCCCeEEEEEcC------------------C
Confidence 532211 00000 001123 56666677 6888888888999999877765543321 0
Q ss_pred cccccCceEEEEccCCcEEEEeCCCCEEEEEeCCC
Q 001380 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPAS 867 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~ 867 (1089)
...+..|.+|+++++|++||+|..+++|+++++++
T Consensus 288 ~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 288 RKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 12377899999999999999999999999998753
No 85
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=2.5e-19 Score=198.77 Aligned_cols=245 Identities=11% Similarity=0.191 Sum_probs=193.2
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
..+..|.+|++|+ +|+|||++..+++|.+++.+|++.. +... ..+..|.+|+++++|+ +||++..
T Consensus 17 ~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~------------~~~~~~~~i~~~~~g~-l~v~~~~ 81 (300)
T 2qc5_A 17 IPDSGPYGITSSE-DGKVWFTQHKANKISSLDQSGRIKE-FEVP------------TPDAKVMCLIVSSLGD-IWFTENG 81 (300)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEE-EECS------------STTCCEEEEEECTTSC-EEEEETT
T ss_pred CCCCCcceeeECC-CCCEEEEcCCCCeEEEECCCCceEE-EECC------------CCCCcceeEEECCCCC-EEEEecC
Confidence 4578999999997 7999999999999999999866554 3322 1245899999999998 9999998
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCC
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g 757 (1089)
+++|.++|.+ +.+..+.... ....|++++++++| .+||++.+++.|+++++. +.+..+...
T Consensus 82 ~~~v~~~d~~-g~~~~~~~~~---------------~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~- 142 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPLPQ---------------PDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLP- 142 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSS---------------TTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECS-
T ss_pred CCeEEEECCC-CCeEEecCCC---------------CCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCC-
Confidence 9999999988 6666554211 02479999999877 899999989999999988 666655421
Q ss_pred ccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcccccccc
Q 001380 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837 (1089)
Q Consensus 758 ~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~ 837 (1089)
.....|.+|+++++| +||+++..++.|.+++++ +....+... ..+.
T Consensus 143 ------------~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~--------------------~~~~ 188 (300)
T 2qc5_A 143 ------------NKGSYPAFITLGSDN-ALWFTENQNNSIGRITNT-GKLEEYPLP--------------------TNAA 188 (300)
T ss_dssp ------------STTCCEEEEEECTTS-SEEEEETTTTEEEEECTT-CCEEEEECS--------------------STTC
T ss_pred ------------CCCCCceeEEECCCC-CEEEEecCCCeEEEECCC-CcEEEeeCC--------------------CCCC
Confidence 123479999999998 699999999999999984 444433210 1145
Q ss_pred CceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEE
Q 001380 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRY 917 (1089)
Q Consensus 838 ~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~ 917 (1089)
.|.+++++++|++||++..+++|.++|+ ++.+..+... ..+..|.+|++|++|+|||++..+++|.+
T Consensus 189 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 255 (300)
T 2qc5_A 189 APVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIP------------TPNARPHAITAGKNSEIWFTEWGANQIGR 255 (300)
T ss_dssp CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS------------STTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred CcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECC------------CCCCCceEEEECCCCCEEEeccCCCeEEE
Confidence 7999999999999999999999999998 4555554321 13567999999999999999999999999
Q ss_pred EeCCCC
Q 001380 918 LDLNKE 923 (1089)
Q Consensus 918 ~~~~~~ 923 (1089)
+++.+.
T Consensus 256 ~~~~g~ 261 (300)
T 2qc5_A 256 ITNDNT 261 (300)
T ss_dssp ECTTSC
T ss_pred ECCCCc
Confidence 999553
No 86
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=99.86 E-value=5.5e-22 Score=212.49 Aligned_cols=131 Identities=16% Similarity=0.302 Sum_probs=119.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIV 244 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~ 244 (1089)
.++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++....||++++|..+++++|+++++|+|
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMS-GLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF 177 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCT-TTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcH-hhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence 78999999999999999999999999999999999999996 99999999999999999999999999999999999999
Q ss_pred EcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 245 IEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 245 VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
|||+.+|+.+|+++|+.+++|.++....+.....|++++.++.++ .++|...
T Consensus 178 vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el--~~~l~~~ 229 (233)
T 3umb_A 178 VSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDL--LQFVQAR 229 (233)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHH--HHHHHC-
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHH--HHHHHHh
Confidence 999999999999999999999997633333356899999999998 6666543
No 87
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.86 E-value=1.7e-21 Score=193.05 Aligned_cols=137 Identities=18% Similarity=0.169 Sum_probs=121.3
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
...+|+++|+|++. +++|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+++|++ +++
T Consensus 4 ~~~~G~~~p~~~l~--~~~g~~~~l-~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~-----d~~ 75 (148)
T 3hcz_A 4 PLLLGKKAPNLYMT--DTTGTYRYL-YDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANI-----ERK 75 (148)
T ss_dssp CCCTTSBCCCCCCB--CTTSCBCCG-GGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEEC-----CSS
T ss_pred ccCCCCcCCceEEe--cCCCCEEEh-HHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEe-----cCC
Confidence 45789999999964 569999999 8999999999999999999999999999999999988899999976 456
Q ss_pred HHHHHHHHHHcCCc-cceeecCChh--HHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 503 LEAIRNAVLRYGIS-HPVVNDGDMN--LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~-~~v~~d~~~~--l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
.+.+++++++++++ |+++.|.+.. +++.|+|.++|+++|||++|+++.++.|. +.++++++.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~---~~~~~~l~~l~~ 143 (148)
T 3hcz_A 76 DEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGY---ENLDDFLVQYEK 143 (148)
T ss_dssp SHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCG---GGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCH---HHHHHHHHHHHH
Confidence 67999999999999 9999999888 99999999999999999999999998876 445555554444
No 88
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.86 E-value=1.4e-21 Score=197.41 Aligned_cols=138 Identities=17% Similarity=0.235 Sum_probs=121.1
Q ss_pred ccCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEec-CCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh
Q 001380 422 ENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT-YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 422 ~~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~ 500 (1089)
....+|+++|+|+..+.+.+|+++++ ++++||++||+||+ +||++|+.++|.|++++++|+++++.+|+|++
T Consensus 5 ~~l~~G~~~P~f~~~l~~~~G~~~~l-~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~------ 77 (163)
T 3gkn_A 5 TDAVLELPAATFDLPLSLSGGTQTTL-RAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSR------ 77 (163)
T ss_dssp CCCCCCCCGGGGGCCEECSTTCEECS-GGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEES------
T ss_pred cccccCCcCCCccccccCCCCCEEEH-HHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeC------
Confidence 35679999999992223569999999 99999999999997 99999999999999999999988999999986
Q ss_pred hcHHHHHHHHHHcCCccceeecCChhHHHHhCCCc------------eeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 501 KDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNS------------WPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~------------~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
++.+.+++|+++++++|+++.|.+.++++.|++.. +|++||||++|+|++.+.+......++++++
T Consensus 78 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~ 155 (163)
T 3gkn_A 78 DSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLA 155 (163)
T ss_dssp SCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHH
Confidence 47889999999999999999999999999999987 9999999999999999866555444444443
No 89
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.86 E-value=3.3e-21 Score=204.49 Aligned_cols=145 Identities=18% Similarity=0.263 Sum_probs=127.9
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCC-EEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGK-VVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN-- 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk-~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~-- 499 (1089)
...+|+++|+|++. +.+|+++++ ++++|| +|||+||++||++|+.++|.|++++++|+++++.||+|+++.+..
T Consensus 31 ~l~~G~~aP~f~l~--~~~G~~v~l-~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~ 107 (218)
T 3u5r_E 31 SITLGTRAADFVLP--DAGGNLFTL-AEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFP 107 (218)
T ss_dssp CCCTTCBCCCCCEE--CTTCCEECG-GGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCG
T ss_pred cCCCCCcCCCcEeE--CCCCCEEeH-HHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 46799999999965 569999999 999999 599999999999999999999999999999899999998753322
Q ss_pred hhcHHHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEec---------CCCchhhHHHHHHHHHH
Q 001380 500 EKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLA---------GEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~---------G~~~~~~l~~~l~~~l~ 570 (1089)
+++.+.+++|+++++++|+++.|.+.++++.|+|..+|++||||++|+|+++.. +....+.+.+.|+.+++
T Consensus 108 ~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 108 EETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp GGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 388999999999999999999999999999999999999999999999998743 23346778888887764
No 90
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.86 E-value=3.8e-21 Score=194.48 Aligned_cols=143 Identities=25% Similarity=0.455 Sum_probs=128.9
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
...+|.++|+|++. +++|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+|+|++ +++
T Consensus 7 ~~~~g~~~p~~~l~--~~~g~~~~l-~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~-----d~~ 78 (165)
T 3or5_A 7 ADARPTPAPSFSGV--TVDGKPFSS-ASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAV-----NEQ 78 (165)
T ss_dssp CCCCCCBCCCCEEE--CTTSCEEEG-GGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEEC-----SCC
T ss_pred hhcCCCCCCCceee--CCCCCEech-hHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEEC-----CCC
Confidence 45789999999964 569999999 8999999999999999999999999999999999988899999976 467
Q ss_pred HHHHHHHHHHcCCccceeecCChhHHHHh------CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhcc
Q 001380 503 LEAIRNAVLRYGISHPVVNDGDMNLWREL------GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGK 574 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d~~~~l~~~~------~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~~ 574 (1089)
.+.+++++++++++|+++.|.+ ++.+.| ++.++|+++|||++|+++.++.|..+.+.+.+.|+.+++...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 79 LPNVKNYMKTQGIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp HHHHHHHHHHHTCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHcCCCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhcc
Confidence 8899999999999999999876 888998 8999999999999999999999999999999999999876554
No 91
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=99.86 E-value=3.6e-21 Score=205.56 Aligned_cols=132 Identities=18% Similarity=0.249 Sum_probs=119.7
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEE
Q 001380 164 GIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECI 243 (1089)
Q Consensus 164 ~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v 243 (1089)
..++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++....||++.+|..+++++|+++++|+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 173 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT-NSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL 173 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG-GGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh-hhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE
Confidence 378999999999999999999999999999999999999996 9999999999999999999999999999999999999
Q ss_pred EEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 244 VIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 244 ~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
+|||+.+|+.+|+++|+.+++|.++....+.....|+++++++.++ ..+|...
T Consensus 174 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el--~~~l~~~ 226 (230)
T 3um9_A 174 FVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVL--ASRFSPV 226 (230)
T ss_dssp EEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHH--HHTCCC-
T ss_pred EEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHH--HHHHHHh
Confidence 9999999999999999999999998644444456899999999888 5555443
No 92
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=6.7e-21 Score=203.47 Aligned_cols=201 Identities=16% Similarity=0.214 Sum_probs=151.6
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHh-----------hhcCCCHHHH----HHHHHhhcCCCCCCH
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFL-----------PFMGTGEANF----LGGVASVKGVKGFDS 143 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~~~~~~~~~ 143 (1089)
+|+|+||+||||+++...+..++.++++.+...-....+. ...+.+...+ ........+.. ..
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 85 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGK--IA 85 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTC--CC
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCC--CC
Confidence 8999999999999999888877776665543221222222 2334444332 22222222222 33
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCC-CeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCC
Q 001380 144 EAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKG-LKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLK 222 (1089)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~G-i~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~K 222 (1089)
.+...++.+.+.+.+... ..++||+.++++.|+++| ++++++||.....++..++.+++. .+|+.+++. .|
T Consensus 86 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~-~~f~~~~~~-----~k 157 (234)
T 3ddh_A 86 ADIIRQIVDLGKSLLKMP--IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS-PYFDHIEVM-----SD 157 (234)
T ss_dssp HHHHHHHHHHHHHHTTCC--CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG-GGCSEEEEE-----SC
T ss_pred HHHHHHHHHHHHHHhhcc--CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH-hhhheeeec-----CC
Confidence 445556666666655543 378999999999999999 999999999999999999999996 999999874 58
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCC----CCHHHHhhcCCcEEecCcccC
Q 001380 223 PAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTT----LSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 223 P~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g----~~~~~l~~~~~d~vi~dl~el 289 (1089)
|++.+|+.+++++|++|++|++|||+. +|+.+|+++|+.+++|.+| ....+.....++++++++.||
T Consensus 158 pk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el 229 (234)
T 3ddh_A 158 KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229 (234)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred CCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence 999999999999999999999999997 9999999999999999544 434444455669999999988
No 93
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.86 E-value=2.7e-21 Score=191.53 Aligned_cols=137 Identities=22% Similarity=0.325 Sum_probs=122.8
Q ss_pred cCCCCCCCCCCccccCCCCCceeeccc--ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHc-CCCCEEEEEEeCCCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRR--DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKY-KDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~--~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~-~~~~v~vi~v~~~~~~~ 499 (1089)
...+|+++|+|++. +++|+.+++ + +++||++||+||++||++|+.++|.|.+++++| ++.++.+++|++
T Consensus 4 ~~~~g~~~p~~~l~--~~~g~~~~l-~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~----- 75 (148)
T 3fkf_A 4 KVTVGKSAPYFSLP--NEKGEKLSR-SAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISL----- 75 (148)
T ss_dssp -CCTTSBCCCCCEE--BTTSCEECT-TSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEEC-----
T ss_pred cccCCCcCCCeEee--CCCCCEEec-cccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEEC-----
Confidence 46789999999964 569999999 8 899999999999999999999999999999999 888899999976
Q ss_pred hhcHHHHHHHHHHcCCccceeecC---ChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 500 EKDLEAIRNAVLRYGISHPVVNDG---DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~v~~d~---~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+.+.+.+++++++++++|+++.|. +..+++.|+|.++|++++||++|+++.++. +.+.+.+.|+.+++
T Consensus 76 d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 76 DIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp CSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 456789999999999999999998 679999999999999999999999999865 67788888877654
No 94
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.86 E-value=3.1e-21 Score=202.71 Aligned_cols=145 Identities=19% Similarity=0.249 Sum_probs=120.5
Q ss_pred cCCCCCCCCCCccccCCCC-CceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--
Q 001380 423 NRKTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN-- 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~-g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~-- 499 (1089)
.......+|+|+++ +++ |++++| ++++||+|||+|||+||++|+ ++|.|++++++|+++++.||+|+++.|..
T Consensus 28 ~~~~~~~~pdF~l~--d~~~G~~v~L-sd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e 103 (215)
T 2i3y_A 28 HKDEKGTIYDYEAI--ALNKNEYVSF-KQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQE 103 (215)
T ss_dssp CCCCCCCGGGCEEE--BSSSSCEEEG-GGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cccccCCcCCcEee--eCCCCCEEcH-HHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCC
Confidence 34567889999964 568 999999 999999999999999999999 99999999999998899999999877643
Q ss_pred hhcHHHHHHHHH------HcCCccceeecCC--h----hHHHHh-----------C--------------CCceeEEEEE
Q 001380 500 EKDLEAIRNAVL------RYGISHPVVNDGD--M----NLWREL-----------G--------------VNSWPTFAVV 542 (1089)
Q Consensus 500 ~~~~~~~~~~~~------~~~~~~~v~~d~~--~----~l~~~~-----------~--------------v~~~Pt~~li 542 (1089)
.++.+++++|++ +++++||++.|.+ + .++..+ + |...|++|||
T Consensus 104 ~~~~~~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLI 183 (215)
T 2i3y_A 104 PGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLV 183 (215)
T ss_dssp CSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEE
T ss_pred CCCHHHHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEE
Confidence 346788999999 9999999987532 2 222221 1 2333899999
Q ss_pred CCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 543 GPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 543 d~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
|++|+|+.++.|....+++++.|++++++
T Consensus 184 D~~G~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 184 GPDGIPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp CTTSCEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 99999999999988888999999888764
No 95
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.86 E-value=2.3e-21 Score=199.95 Aligned_cols=140 Identities=21% Similarity=0.326 Sum_probs=127.7
Q ss_pred CCCCCCCCCCccccCCC--CCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCE------EEEEEeCC
Q 001380 424 RKTTPIVPEFPAKLDWL--NTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPF------TVVGVHSA 495 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~--~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v------~vi~v~~~ 495 (1089)
...|+++|+|++ .++ +|+.+++ ++++||++||+||++||++|+.++|.|++++++|+++++ .+|+|++
T Consensus 31 ~~~g~~~p~f~l--~~~~~~g~~~~l-~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~- 106 (183)
T 3lwa_A 31 EADRQQLPDIGG--DSLMEEGTQINL-SDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV- 106 (183)
T ss_dssp GGGCCCCCCCEE--EBSSSTTCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC-
T ss_pred cccCCCCCceec--cccccCCcEecH-HHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEEC-
Confidence 457899999995 466 8999999 899999999999999999999999999999999988788 9999986
Q ss_pred CCCChh-cHHHHHHHHHHcCCccceeecCChhHHHHhC---CCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 496 KFDNEK-DLEAIRNAVLRYGISHPVVNDGDMNLWRELG---VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 496 ~~~~~~-~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~---v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
++ +.+.+++|+++++++|+++.|.+..+.+.|+ +.++|++||||++|++++++.|..+.+++.+.|+.++++
T Consensus 107 ----d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 107 ----RDYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp ----SCCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred ----CCCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 33 7899999999999999999999999999885 899999999999999999999999999999999988763
No 96
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.86 E-value=2.7e-21 Score=198.02 Aligned_cols=141 Identities=19% Similarity=0.249 Sum_probs=127.8
Q ss_pred hccCCCCCCCCCCccccCCCCC--ceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC
Q 001380 421 VENRKTTPIVPEFPAKLDWLNT--APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498 (1089)
Q Consensus 421 ~~~~~~g~~~P~f~~~~~~~~g--~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~ 498 (1089)
+....+|+++|+|++. +.+| +.+++ ++++||++||+||++||++|+.++|.|++++++ ++.+|+|++
T Consensus 27 ~~~~~~G~~~P~f~l~--~~~g~~~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~---- 95 (176)
T 3kh7_A 27 LPSALIGKPFPAFDLP--SVQDPARRLTE-ADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINY---- 95 (176)
T ss_dssp STTTTTTSBCCCCEEE--BSSCTTSEEEG-GGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEE----
T ss_pred ccccccCCcCCCcEec--ccCCCCceecH-HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeC----
Confidence 3456799999999965 4577 78999 999999999999999999999999999999886 699999975
Q ss_pred ChhcHHHHHHHHHHcCCccc-eeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 499 NEKDLEAIRNAVLRYGISHP-VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~-v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
+++.+.+++++++++++|+ ++.|.+..+++.|+|.++|++||||++|+|++++.|..+.+.+.+.|+++++...
T Consensus 96 -~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~l~ 170 (176)
T 3kh7_A 96 -KDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQLL 170 (176)
T ss_dssp -SCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHHHH
T ss_pred -CCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 4788999999999999997 5889999999999999999999999999999999999999999999999888754
No 97
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.85 E-value=4e-21 Score=191.69 Aligned_cols=143 Identities=25% Similarity=0.469 Sum_probs=131.1
Q ss_pred CCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHH
Q 001380 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLE 504 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~ 504 (1089)
.+|+.+|+|++. +++|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+++|+.+ .++.+
T Consensus 3 ~~G~~~p~~~l~--~~~g~~~~l-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~----~~~~~ 75 (153)
T 2l5o_A 3 LDSKTAPAFSLP--DLHGKTVSN-ADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP----IDPIE 75 (153)
T ss_dssp -CCTTCCSCEEE--CTTSCEEEH-HHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT----TSCHH
T ss_pred CCCCCCCCcEee--cCCCCCccH-HHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC----CCCHH
Confidence 479999999964 569999999 88999999999999999999999999999999999888999999852 46788
Q ss_pred HHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhcc
Q 001380 505 AIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYGK 574 (1089)
Q Consensus 505 ~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~~ 574 (1089)
.+++++++++++|+++.|.+..+++.|+|.++|+++|||++|+++.++.|..+.+.+.+.|+.+++....
T Consensus 76 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 76 SVRQYVKDYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCSS
T ss_pred HHHHHHHHcCCCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999886543
No 98
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=99.85 E-value=2.1e-21 Score=207.93 Aligned_cols=129 Identities=22% Similarity=0.305 Sum_probs=118.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIV 244 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~ 244 (1089)
.++||+.++|+.|+++ ++++|+||.....++..++.+|+. .+|+.++++++....||++.+|+.+++++|++|++|++
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIK-DLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcH-HHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEE
Confidence 6899999999999999 999999999999999999999996 99999999999999999999999999999999999999
Q ss_pred EcCCh-hhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 245 IEDAL-AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 245 VGD~~-~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
|||+. +|+.+|+++|+.+++|.++....+... .|++++.++.++ .++|...
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~-~a~~~~~~~~el--~~~l~~~ 229 (234)
T 3u26_A 178 VGDNPVKDCGGSKNLGMTSILLDRKGEKREFWD-KCDFIVSDLREV--IKIVDEL 229 (234)
T ss_dssp EESCTTTTHHHHHTTTCEEEEECSSSTTGGGGG-GCSEEESSTHHH--HHHHHHH
T ss_pred EcCCcHHHHHHHHHcCCEEEEECCCCCcccccc-CCCEeeCCHHHH--HHHHHHH
Confidence 99998 999999999999999999875555544 799999999998 6666543
No 99
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.85 E-value=2.1e-21 Score=203.87 Aligned_cols=143 Identities=20% Similarity=0.247 Sum_probs=119.5
Q ss_pred CCCCCCCCCccccCCCC-CceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--hh
Q 001380 425 KTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--EK 501 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~-g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~~ 501 (1089)
..++.+|+|++ .+++ |+++++ ++++||+|||+|||+||++|+.++|.|++++++|+++++.||+|+++.|.. .+
T Consensus 21 ~~~~~~p~f~l--~~~~~G~~v~l-~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d 97 (208)
T 2f8a_A 21 QSMQSVYAFSA--RPLAGGEPVSL-GSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENA 97 (208)
T ss_dssp -CCCCGGGCEE--CBTTCSSCEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCS
T ss_pred hhcCccCceEe--eeCCCCCCccH-HHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCC
Confidence 46788999995 4668 999999 899999999999999999999999999999999998899999999865532 24
Q ss_pred cHHHHHHHHH------HcCCccceeecCC--hh----HHH----Hh-------------------------CCCceeEEE
Q 001380 502 DLEAIRNAVL------RYGISHPVVNDGD--MN----LWR----EL-------------------------GVNSWPTFA 540 (1089)
Q Consensus 502 ~~~~~~~~~~------~~~~~~~v~~d~~--~~----l~~----~~-------------------------~v~~~Pt~~ 540 (1089)
+.+.+++|++ +++++||++.|.+ +. ++. .+ +|.+.|++|
T Consensus 98 ~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tf 177 (208)
T 2f8a_A 98 KNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKF 177 (208)
T ss_dssp CHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEE
T ss_pred CHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEE
Confidence 6788999998 8999999986422 21 222 22 266679999
Q ss_pred EECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 541 VVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 541 lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
|||++|+|+.++.|..+.+++.+.|+++++
T Consensus 178 lID~~G~i~~~~~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 178 LVGPDGVPLRRYSRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp EECTTSCEEEEECTTSCGGGGHHHHHHHHC
T ss_pred EEcCCCcEEEEeCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999888774
No 100
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.85 E-value=2.5e-21 Score=196.73 Aligned_cols=144 Identities=13% Similarity=0.139 Sum_probs=122.4
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--hh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--EK 501 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~~ 501 (1089)
.++|+.+|+|++. +++|+++++ ++++||++||+||++||++|+.++|.|++++++|+++++.+|+|+++.|.. .+
T Consensus 5 ~~~g~~~p~f~l~--~~~G~~~~l-~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 81 (169)
T 2v1m_A 5 HKSWNSIYEFTVK--DINGVDVSL-EKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPW 81 (169)
T ss_dssp --CCCSGGGCEEE--BTTSCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred ccCCcccccceee--cCCCCCccH-HHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCC
Confidence 4689999999964 569999999 899999999999999999999999999999999998889999999865432 24
Q ss_pred cHHHHHHH-HHHcCCccceee--cCChhHHH-Hh--------C-----CCceeEEEEECCCCcEEEEecCCCchhhHHHH
Q 001380 502 DLEAIRNA-VLRYGISHPVVN--DGDMNLWR-EL--------G-----VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDL 564 (1089)
Q Consensus 502 ~~~~~~~~-~~~~~~~~~v~~--d~~~~l~~-~~--------~-----v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~ 564 (1089)
+.+.+++| .++++++||++. |.++.++. .| + +.++|++||||++|++++++.|..+.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 161 (169)
T 2v1m_A 82 AEAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGD 161 (169)
T ss_dssp CHHHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHH
T ss_pred CHHHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHH
Confidence 68899999 599999999985 66555432 22 5 55679999999999999999999889999999
Q ss_pred HHHHHH
Q 001380 565 VEAALL 570 (1089)
Q Consensus 565 l~~~l~ 570 (1089)
|+++++
T Consensus 162 i~~ll~ 167 (169)
T 2v1m_A 162 IMELLE 167 (169)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 988875
No 101
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=99.85 E-value=7e-21 Score=205.23 Aligned_cols=128 Identities=23% Similarity=0.311 Sum_probs=116.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIV 244 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~ 244 (1089)
.++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++.+..||++++|+.+++++|++|++|+|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 183 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD-RVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCF 183 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH-HHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 78999999999999999999999999999999999999996 99999999999999999999999999999999999999
Q ss_pred EcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCC-cEEecCcccCCHHHHHh
Q 001380 245 IEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASP-SLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 245 VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~-d~vi~dl~el~i~~ll~ 296 (1089)
|||+.+|+++|+++|+.+++|.++...+.+ ...| ++++.++.++ .++|.
T Consensus 184 iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~~~~el--~~~l~ 233 (240)
T 2no4_A 184 VSSNAWDLGGAGKFGFNTVRINRQGNPPEY-EFAPLKHQVNSLSEL--WPLLA 233 (240)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCC-TTSCCSEEESSGGGH--HHHHC
T ss_pred EeCCHHHHHHHHHCCCEEEEECCCCCCCcc-cCCCCceeeCCHHHH--HHHHH
Confidence 999999999999999999999987652222 3468 9999999988 55554
No 102
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.85 E-value=4.8e-21 Score=188.96 Aligned_cols=137 Identities=19% Similarity=0.356 Sum_probs=122.2
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
...+|+++|+|++. +++|+.+++ ++ +||++||+||++||++|+.++|.|++++++|++.++.+++|+++. .+++
T Consensus 8 ~~~~g~~~p~~~l~--~~~g~~~~l-~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~~~ 81 (145)
T 3erw_A 8 EEKQPAVPAVFLMK--TIEGEDISI-PN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN--SEQN 81 (145)
T ss_dssp ----CCSCCEEEEE--CTTSCEEEE-SC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG--GSSC
T ss_pred cccCCCcCCCceee--cCCCCEEeH-HH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC--CcCC
Confidence 45689999999954 569999999 77 999999999999999999999999999999997789999998731 2348
Q ss_pred HHHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHH
Q 001380 503 LEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLV 565 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l 565 (1089)
.+.+++++++++++|+++.|.+..+++.|+|.++|+++|||++|+++.++.|..+.+.+.++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 82 QQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999988887765
No 103
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.85 E-value=6.6e-21 Score=189.92 Aligned_cols=138 Identities=28% Similarity=0.375 Sum_probs=123.7
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcH
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDL 503 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~ 503 (1089)
..+|+++|+|++. + +|+.+++ ++++||++||+||++||++|+.++|.|.+++++|++.++.+|+|++ +.+.
T Consensus 3 l~~G~~~P~f~l~--~-~g~~~~l-~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~-----d~~~ 73 (152)
T 3gl3_A 3 LDKGDKAPDFALP--G-KTGVVKL-SDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNL-----DAKT 73 (152)
T ss_dssp CCTTSBCCCCEEE--B-SSSEEEG-GGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEEC-----CSSH
T ss_pred CCCCCcCCceEee--C-CCCeEeH-HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEEC-----CCCH
Confidence 4689999999964 5 8899999 8999999999999999999999999999999999988899999976 4468
Q ss_pred HHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCc--hhhHHHHHHHHHH
Q 001380 504 EAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGH--RKDLDDLVEAALL 570 (1089)
Q Consensus 504 ~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~--~~~l~~~l~~~l~ 570 (1089)
+.+++++++++++|+++.|.+.++++.|+|.++|+++|||++|++++++.|... .+.+.+.|++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 74 GDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALG 142 (152)
T ss_dssp HHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHc
Confidence 899999999999999999999999999999999999999999999999988643 3567777665543
No 104
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.85 E-value=7.5e-21 Score=189.93 Aligned_cols=140 Identities=24% Similarity=0.421 Sum_probs=124.2
Q ss_pred CCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHH
Q 001380 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLE 504 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~ 504 (1089)
.+|+++|+|++. +.+|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+++|+++ .++.+
T Consensus 3 ~~G~~~p~~~l~--~~~g~~~~l-~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d----~~~~~ 75 (154)
T 3kcm_A 3 LEENPAPDFTLN--TLNGEVVKL-SDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSID----EGGKV 75 (154)
T ss_dssp CTTSBCCCCEEE--CTTSCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECC----TTHHH
T ss_pred CCCCCCCCeEEE--cCCCCEEeh-hhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcC----CcchH
Confidence 579999999964 569999999 89999999999999999999999999999999999888999999863 23588
Q ss_pred HHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCC--chhhHHHHHHHHHHH
Q 001380 505 AIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG--HRKDLDDLVEAALLF 571 (1089)
Q Consensus 505 ~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~--~~~~l~~~l~~~l~~ 571 (1089)
.+++++++++++|+++.|.+..+++.|++.++|+++|||++|++++++.|.. ..+.+.+.|+.+...
T Consensus 76 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 76 AVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp HHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC---
T ss_pred HHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998876 455777777665544
No 105
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.85 E-value=4.8e-21 Score=190.83 Aligned_cols=134 Identities=23% Similarity=0.359 Sum_probs=117.4
Q ss_pred CCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHH
Q 001380 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508 (1089)
Q Consensus 429 ~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~ 508 (1089)
++|+|. + +.+|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+|+|++ ++.+.+++
T Consensus 4 pa~~~~--~-~~~G~~~~l-~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~------d~~~~~~~ 73 (151)
T 3raz_A 4 SADELA--G-WKDNTPQSL-QSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIAL------DTSDNIGN 73 (151)
T ss_dssp ---CEE--E-TTTCCEECG-GGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEES------SCHHHHHH
T ss_pred Ccchhh--c-ccCCCEecH-HHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEEC------CChHHHHH
Confidence 344554 3 269999999 8999999999999999999999999999999999888999999986 45688999
Q ss_pred HHHHcCCccceeecC---ChhHHHHhC--CCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHh
Q 001380 509 AVLRYGISHPVVNDG---DMNLWRELG--VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 509 ~~~~~~~~~~v~~d~---~~~l~~~~~--v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
|+++++++||++.|. ..++++.|+ +.++|++||||++|++++++.|..+.+.+.+.|+.+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 74 FLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp HHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred HHHHcCCCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 999999999998765 456889999 9999999999999999999999999999999998877643
No 106
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=201.92 Aligned_cols=144 Identities=14% Similarity=0.148 Sum_probs=118.7
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--h
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--E 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~ 500 (1089)
..++|+++|+|++. +++|+++++ ++++||++||+||++||++|+.++|.|++++++|+++++.||+|+++.+.. .
T Consensus 22 ~~~~g~~~p~f~l~--~~~G~~~~l-~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~ 98 (181)
T 2p31_A 22 SMQQEQDFYDFKAV--NIRGKLVSL-EKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEP 98 (181)
T ss_dssp -----CCGGGCEEE--BTTSCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred cCCcCCccCceEee--cCCCCEecH-HHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCC
Confidence 45689999999964 569999999 899999999999999999999999999999999998899999999865432 2
Q ss_pred hcHHHHHHHHHH-cCCccceee--cCChhHHH---HhCCCcee-------EEEEECCCCcEEEEecCCCchhhHHHHHHH
Q 001380 501 KDLEAIRNAVLR-YGISHPVVN--DGDMNLWR---ELGVNSWP-------TFAVVGPNGKLLAQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 501 ~~~~~~~~~~~~-~~~~~~v~~--d~~~~l~~---~~~v~~~P-------t~~lid~~G~i~~~~~G~~~~~~l~~~l~~ 567 (1089)
++.+.+++|+++ ++++||++. |.++.... .|++..+| ++||||++|++++++.|..+.+++.+.|++
T Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 178 (181)
T 2p31_A 99 DSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITA 178 (181)
T ss_dssp SCHHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 478899999999 999999985 44443322 45688899 999999999999999998888888777765
Q ss_pred HH
Q 001380 568 AL 569 (1089)
Q Consensus 568 ~l 569 (1089)
++
T Consensus 179 ll 180 (181)
T 2p31_A 179 LV 180 (181)
T ss_dssp TC
T ss_pred Hh
Confidence 43
No 107
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=99.85 E-value=3.3e-21 Score=202.49 Aligned_cols=193 Identities=19% Similarity=0.293 Sum_probs=148.6
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
+++|+|+||+||||+++... +.++++++|+....+....+.+... ........+.+.+.+
T Consensus 4 ~~~k~iifDlDGTL~d~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 63 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHD----FAAIREALSIPAEDDILTHLAALPA----------------DESAAKHAWLLEHER 63 (205)
T ss_dssp GGCCEEEECTBTTTEEEEEC----HHHHHHHTTCCTTSCHHHHHHHSCH----------------HHHHHHHHHHHHTHH
T ss_pred ccCCEEEEeCCCcCcccHHH----HHHHHHHhCCCchHHHHHHHhcCCh----------------HHHHHHHHHHHHHHH
Confidence 45799999999999997764 4467777887754222211111100 112222333333433
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCc--cEEEEcCCccCCCCCHHHHHHHHHH
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMF--DAIVSADAFENLKPAPDIFLSASKI 234 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~f--d~i~~~~~~~~~KP~~~~~~~~l~~ 234 (1089)
.+... ..++||+.++|+.|+++|++++|+||.....++..++.+|+. .+| +.+++.+. ..+||++.+|+.++++
T Consensus 64 ~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~ 139 (205)
T 3m9l_A 64 DLAQG--SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLA-DCFAEADVLGRDE-APPKPHPGGLLKLAEA 139 (205)
T ss_dssp HHEEE--EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGSCGGGEECTTT-SCCTTSSHHHHHHHHH
T ss_pred HHhhc--CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCch-hhcCcceEEeCCC-CCCCCCHHHHHHHHHH
Confidence 33332 278999999999999999999999999999999999999996 999 88888876 7899999999999999
Q ss_pred cCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 235 LNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 235 lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
+|+++++|+||||+.+|+++|+++|+.+|++.++.. .+ ...|++++.++.|| ..++...
T Consensus 140 ~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~--~~-~~~ad~v~~~~~el--~~~~~~~ 198 (205)
T 3m9l_A 140 WDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN--PW-PELTDWHARDCAQL--RDLLSAE 198 (205)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSC--SC-GGGCSEECSSHHHH--HHHHHHT
T ss_pred cCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC--cc-cccCCEEeCCHHHH--HHHHHhc
Confidence 999999999999999999999999999999998753 12 23589999999888 5555443
No 108
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.85 E-value=1.1e-18 Score=193.64 Aligned_cols=240 Identities=15% Similarity=0.193 Sum_probs=187.6
Q ss_pred CCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCC
Q 001380 599 PLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTEN 678 (1089)
Q Consensus 599 ~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n 678 (1089)
.+..|.++++++ +|++||++..+++|.+++.+|+.. .+.... ....|.+++++++|+ +||++..+
T Consensus 60 ~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~g~~~-~~~~~~------------~~~~~~~i~~~~~g~-l~v~~~~~ 124 (300)
T 2qc5_A 60 PDAKVMCLIVSS-LGDIWFTENGANKIGKLSKKGGFT-EYPLPQ------------PDSGPYGITEGLNGD-IWFTQLNG 124 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEE-EEECSS------------TTCCEEEEEECSTTC-EEEEETTT
T ss_pred CCCcceeEEECC-CCCEEEEecCCCeEEEECCCCCeE-EecCCC------------CCCCCccceECCCCC-EEEEccCC
Confidence 357899999996 889999999899999999997764 333221 124799999999888 99999989
Q ss_pred CEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCc
Q 001380 679 HALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758 (1089)
Q Consensus 679 ~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~ 758 (1089)
+.|.+++++ +.+..+.... ....|.+++++++| .||+++.+++.|++++. ++....+...
T Consensus 125 ~~i~~~~~~-g~~~~~~~~~---------------~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~-- 184 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEYDLPN---------------KGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGKLEEYPLP-- 184 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---------------TTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECS--
T ss_pred CeEEEECCC-CCEEEccCCC---------------CCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCcEEEeeCC--
Confidence 999999988 6665553211 13479999999988 59999999999999998 5655555421
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccC
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~ 838 (1089)
..+..|.+|+++++| .|||++..++.|.+++++ +....+... ..+..
T Consensus 185 -----------~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~--------------------~~~~~ 231 (300)
T 2qc5_A 185 -----------TNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTT-GEISEYDIP--------------------TPNAR 231 (300)
T ss_dssp -----------STTCCEEEEEECTTS-SEEEEETTTTEEEEECTT-CCEEEEECS--------------------STTCC
T ss_pred -----------CCCCCcceEEECCCC-CEEEEccCCCEEEEEcCC-CcEEEEECC--------------------CCCCC
Confidence 224579999999988 999999999999999984 444333110 11457
Q ss_pred ceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEE
Q 001380 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918 (1089)
Q Consensus 839 P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~ 918 (1089)
|.++++|++|++||++..+++|.++|++ +.+..+... .....|.+|+++++|+|||++. + +|.++
T Consensus 232 ~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~------------~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 232 PHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQ------------TENAEPHGITFGKDGSVWFALK-C-KIGKL 296 (300)
T ss_dssp EEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECC------------STTCCCCCEEECTTSCEEEECS-S-EEEEE
T ss_pred ceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECC------------ccCCccceeEeCCCCCEEEEcc-C-ceEEe
Confidence 9999999999999999999999999985 555555321 1246699999999999999998 6 99999
Q ss_pred eCC
Q 001380 919 DLN 921 (1089)
Q Consensus 919 ~~~ 921 (1089)
+++
T Consensus 297 ~p~ 299 (300)
T 2qc5_A 297 NLN 299 (300)
T ss_dssp EEC
T ss_pred CCC
Confidence 874
No 109
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.85 E-value=1.2e-18 Score=192.99 Aligned_cols=245 Identities=14% Similarity=0.231 Sum_probs=192.0
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~ 676 (1089)
...+..|.++++|+ +|++|+++...++|.+++++|+... +... . ....|.+|+++++|+ +|+++.
T Consensus 11 ~~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~~~~~~-~~~~-~-----------~~~~~~~i~~~~~g~-l~v~~~ 75 (299)
T 2z2n_A 11 TNQDTGPYGITVSD-KGKVWITQHKANMISCINLDGKITE-YPLP-T-----------PDAKVMCLTISSDGE-VWFTEN 75 (299)
T ss_dssp CSSSCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEE-EECS-S-----------TTCCEEEEEECTTSC-EEEEET
T ss_pred CCcCCCccceEECC-CCCEEEEecCCCcEEEEcCCCCeEE-ecCC-c-----------ccCceeeEEECCCCC-EEEeCC
Confidence 34567899999997 8899999998899999999866543 3221 1 124799999999998 999998
Q ss_pred CCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCC
Q 001380 677 ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD 756 (1089)
Q Consensus 677 ~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~ 756 (1089)
.++.|.+++++ +.++.+.... ....|.+|+++++| .||+++.+++.|+++|+ ++....+...
T Consensus 76 ~~~~i~~~~~~-g~~~~~~~~~---------------~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 76 AANKIGRITKK-GIIKEYTLPN---------------PDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp TTTEEEEECTT-SCEEEEECSS---------------TTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred CCCeEEEECCC-CcEEEEeCCC---------------cCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCC
Confidence 88999999986 5555554211 13479999999977 89999998999999998 6666555421
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l 836 (1089)
.....|.+|+++++| ++|+++..++.|.++++ ++....+... ..+
T Consensus 138 -------------~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~--------------------~~~ 182 (299)
T 2z2n_A 138 -------------NKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEFKIP--------------------TPA 182 (299)
T ss_dssp -------------STTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECS--------------------STT
T ss_pred -------------CCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEeeCC--------------------CCC
Confidence 123468999999998 99999999999999998 5555433110 014
Q ss_pred cCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEE
Q 001380 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916 (1089)
Q Consensus 837 ~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~ 916 (1089)
..|.+++++++|++||++..++.|.++|+ ++.+..+... .....|.+|+++++|+|||++..+++|.
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 249 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIP------------TPNARPHAITAGAGIDLWFTEWGANKIG 249 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECS------------STTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECC------------CCCCCceeEEECCCCCEEEeccCCceEE
Confidence 57999999999999999999999999999 6666655321 1356799999999999999999999999
Q ss_pred EEeCCC
Q 001380 917 YLDLNK 922 (1089)
Q Consensus 917 ~~~~~~ 922 (1089)
++++++
T Consensus 250 ~~d~~g 255 (299)
T 2z2n_A 250 RLTSNN 255 (299)
T ss_dssp EEETTT
T ss_pred EECCCC
Confidence 999954
No 110
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.85 E-value=3.3e-21 Score=199.98 Aligned_cols=146 Identities=16% Similarity=0.183 Sum_probs=124.8
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--h
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--E 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~ 500 (1089)
..+.++.+|+|++. +++|+++++ ++++||++||+||++||++|+.++|.|++++++|+++++.||+|+++.+.. .
T Consensus 21 ~~~~~~~~p~f~l~--~~~G~~~~l-~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~ 97 (190)
T 2vup_A 21 HMSAASSIFDFEVL--DADHKPYNL-VQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEP 97 (190)
T ss_dssp ---CCCSGGGSCCB--BTTSSBCCG-GGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCC
T ss_pred cCCCCCcccCeEEE--cCCCCEEEH-HHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCC
Confidence 45678999999954 569999999 899999999999999999999999999999999998889999999865432 2
Q ss_pred hcHHHHHHHH-HHcCCccceee--cCChhHH---------HHhCCCcee------EEEEECCCCcEEEEecCCCchhhHH
Q 001380 501 KDLEAIRNAV-LRYGISHPVVN--DGDMNLW---------RELGVNSWP------TFAVVGPNGKLLAQLAGEGHRKDLD 562 (1089)
Q Consensus 501 ~~~~~~~~~~-~~~~~~~~v~~--d~~~~l~---------~~~~v~~~P------t~~lid~~G~i~~~~~G~~~~~~l~ 562 (1089)
++.+.+++|+ ++++++||++. |.++.++ +.|++.++| ++||||++|++++++.|....+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 177 (190)
T 2vup_A 98 GNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIE 177 (190)
T ss_dssp SCHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHH
T ss_pred CCHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHH
Confidence 4788999999 89999999986 5554432 235899999 9999999999999999998999999
Q ss_pred HHHHHHHHH
Q 001380 563 DLVEAALLF 571 (1089)
Q Consensus 563 ~~l~~~l~~ 571 (1089)
+.|+++++.
T Consensus 178 ~~i~~ll~~ 186 (190)
T 2vup_A 178 KKLIPLLES 186 (190)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999988864
No 111
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.85 E-value=3.5e-21 Score=195.79 Aligned_cols=144 Identities=17% Similarity=0.224 Sum_probs=121.2
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--hh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--EK 501 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~~ 501 (1089)
..+|+.+|+|++ .+++|+++++ ++++||++||+||++||++|+.++|.|++++++|+++++.+|+|+++.+.. .+
T Consensus 6 ~~~g~~~p~f~l--~~~~g~~~~l-~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~ 82 (170)
T 2p5q_A 6 SKNPESVHDFTV--KDAKENDVDL-SIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPG 82 (170)
T ss_dssp ----CCGGGCEE--EBTTSCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCS
T ss_pred CCCCccccceEE--EcCCCCEecH-HHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCC
Confidence 457999999995 4569999999 899999999999999999999999999999999998889999999865422 25
Q ss_pred cHHHHHHHHH-HcCCcccee--ecCChhHHH---------HhCC--Ccee---EEEEECCCCcEEEEecCCCchhhHHHH
Q 001380 502 DLEAIRNAVL-RYGISHPVV--NDGDMNLWR---------ELGV--NSWP---TFAVVGPNGKLLAQLAGEGHRKDLDDL 564 (1089)
Q Consensus 502 ~~~~~~~~~~-~~~~~~~v~--~d~~~~l~~---------~~~v--~~~P---t~~lid~~G~i~~~~~G~~~~~~l~~~ 564 (1089)
+.+.++++++ +++++||++ .|.++.++. .+++ .++| ++||||++|++++++.|..+.+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 162 (170)
T 2p5q_A 83 TNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERD 162 (170)
T ss_dssp CHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHH
T ss_pred CHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHH
Confidence 7889999999 899999998 566654431 2477 7888 999999999999999999888999999
Q ss_pred HHHHHH
Q 001380 565 VEAALL 570 (1089)
Q Consensus 565 l~~~l~ 570 (1089)
|+++++
T Consensus 163 i~~ll~ 168 (170)
T 2p5q_A 163 IKQLLE 168 (170)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 888764
No 112
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.85 E-value=3.5e-19 Score=199.59 Aligned_cols=239 Identities=14% Similarity=0.152 Sum_probs=178.4
Q ss_pred CCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCC-
Q 001380 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH- 679 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~- 679 (1089)
.+|.++++++ +|+|||+|..+++|++++++|+....+... ..|.||+++++|+ |||+|..++
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~---------------~~p~gia~~~dG~-l~vad~~~~~ 94 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQIHATVE---------------GKVSGLAFTSNGD-LVATGWNADS 94 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEEECS---------------SEEEEEEECTTSC-EEEEEECTTS
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceEEEEeCC---------------CCceeEEEcCCCc-EEEEeccCCc
Confidence 7899999998 788999999999999999999877655432 1699999999999 999997643
Q ss_pred -EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEE--eCC
Q 001380 680 -ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAF--SGD 756 (1089)
Q Consensus 680 -~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~--~g~ 756 (1089)
+|.+++..++.++.++.... ...|.++++.+. +.+|+++..++.||++|+.++....+ .+.
T Consensus 95 ~~v~~~d~~~g~~~~~~~~~~---------------~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~ 158 (306)
T 2p4o_A 95 IPVVSLVKSDGTVETLLTLPD---------------AIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEHPM 158 (306)
T ss_dssp CEEEEEECTTSCEEEEEECTT---------------CSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEECGG
T ss_pred ceEEEEcCCCCeEEEEEeCCC---------------ccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeEEEECCc
Confidence 59999988888888764321 235788888764 49999999999999999887643332 221
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCC-CCeEEEecCCCCCCCCccccCCCCCcccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT-GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~-~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~ 835 (1089)
... ......+..|+|| ++++++|||+|+.+++|++++.++ +... .. .....
T Consensus 159 ~~~------~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~-----------------~~---~~~~~ 210 (306)
T 2p4o_A 159 LAR------SNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG-----------------EP---EIFVE 210 (306)
T ss_dssp GSC------SSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC-----------------CC---EEEEE
T ss_pred ccc------ccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC-----------------cc---EEEec
Confidence 110 0112346689999 677779999999999999999874 2110 00 00112
Q ss_pred ccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEc---cCC-cEEEEECC
Q 001380 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA---QNG-NLFIADTN 911 (1089)
Q Consensus 836 l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd---~~G-~lyVad~~ 911 (1089)
+..|.|+++|++|++||++..+++|.+||++ +.+..+.... ..+..|.+++++ +++ +|||++..
T Consensus 211 ~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~-----------~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 211 QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE-----------QGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG-----------GTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc-----------cccCCceEEEEecccCCCCEEEEECCC
Confidence 3579999999999999999999999999997 4554443211 135779999998 564 79999976
Q ss_pred C
Q 001380 912 N 912 (1089)
Q Consensus 912 n 912 (1089)
+
T Consensus 279 ~ 279 (306)
T 2p4o_A 279 G 279 (306)
T ss_dssp T
T ss_pred C
Confidence 4
No 113
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.85 E-value=4.6e-21 Score=197.09 Aligned_cols=149 Identities=15% Similarity=0.143 Sum_probs=123.6
Q ss_pred ccCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--
Q 001380 422 ENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN-- 499 (1089)
Q Consensus 422 ~~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~-- 499 (1089)
.....|..+|+|++. +++|+.+++ ++++||+|||+||++||++|+.++|.|++++++|+++++.||+|+++.|..
T Consensus 10 ~~~~~~~~~p~f~l~--d~~G~~v~l-~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~ 86 (180)
T 3kij_A 10 FLKPKINSFYAFEVK--DAKGRTVSL-EKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESE 86 (180)
T ss_dssp CCCCCCCCGGGCEEE--BTTSCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCC
T ss_pred hhcCCcCcccceEEe--cCCCCEecH-HHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCC
Confidence 345689999999964 669999999 999999999999999999999999999999999999899999999865432
Q ss_pred hhcHHHHHHHHHH-cCCccceeecC-----ChhHHHHhC---CCceeE----EEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 500 EKDLEAIRNAVLR-YGISHPVVNDG-----DMNLWRELG---VNSWPT----FAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 500 ~~~~~~~~~~~~~-~~~~~~v~~d~-----~~~l~~~~~---v~~~Pt----~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
.++.+.+++|+++ ++++||++.+. .......|. +.++|+ +||||++|++++++.|....+.+.+.|+
T Consensus 87 ~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 166 (180)
T 3kij_A 87 PRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIA 166 (180)
T ss_dssp CSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHH
Confidence 3588999999999 99999986522 121111222 235788 9999999999999999998888888888
Q ss_pred HHHHHhc
Q 001380 567 AALLFYG 573 (1089)
Q Consensus 567 ~~l~~~~ 573 (1089)
++|+...
T Consensus 167 ~lL~~~~ 173 (180)
T 3kij_A 167 ALVRQVI 173 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877654
No 114
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=99.84 E-value=2e-20 Score=203.23 Aligned_cols=207 Identities=16% Similarity=0.183 Sum_probs=156.2
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHH---HcCCCC---CHH-----hHh--hhcCCCHHHHHHHHHh----hcCCCC
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFA---EMGVEV---TVE-----DFL--PFMGTGEANFLGGVAS----VKGVKG 140 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~---~~g~~~---~~~-----~~~--~~~~~~~~~~~~~~~~----~~~~~~ 140 (1089)
++|+|+||+||||+|+...+..++.++++ ++|+.. ... .+. ...+.+...+...+.. ..+..
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 90 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR- 90 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC-
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC-
Confidence 58999999999999999999888888775 566654 111 111 2456666655544332 22222
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccC
Q 001380 141 FDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFEN 220 (1089)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~ 220 (1089)
........+.+.+.+.+... ..++||+.++|+.|+ +|++++|+||+....++..++.+++. .+|+.++++
T Consensus 91 -~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~i~~~----- 160 (251)
T 2pke_A 91 -IEARDIQRIVEIGRATLQHP--VEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS-DLFPRIEVV----- 160 (251)
T ss_dssp -CCHHHHHHHHHHHHHHHTCC--CCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG-GTCCCEEEE-----
T ss_pred -CChHHHHHHHHHHHHHHhcc--CCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH-HhCceeeee-----
Confidence 22344555555565554433 378999999999999 89999999999999999999999996 899988874
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCCCH-----HHHhhcCCcE-EecCcccCCHHH
Q 001380 221 LKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTLSE-----ERLKEASPSL-IRKEIGSVSLND 293 (1089)
Q Consensus 221 ~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~~~-----~~l~~~~~d~-vi~dl~el~i~~ 293 (1089)
.||++++|..+++++|+++++|++|||+. +|+.+|+++|+.+++|.+|... +.+....|++ ++.++.++ .+
T Consensus 161 ~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el--~~ 238 (251)
T 2pke_A 161 SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW--PA 238 (251)
T ss_dssp SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGH--HH
T ss_pred CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHH--HH
Confidence 58999999999999999999999999999 9999999999999999887531 2244568998 99999998 55
Q ss_pred HHhc
Q 001380 294 ILTG 297 (1089)
Q Consensus 294 ll~~ 297 (1089)
+|..
T Consensus 239 ~l~~ 242 (251)
T 2pke_A 239 AVRA 242 (251)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 115
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.84 E-value=3e-21 Score=199.42 Aligned_cols=143 Identities=13% Similarity=0.174 Sum_probs=120.6
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh--
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE-- 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~-- 500 (1089)
...+|+.+|+|++. +++|+++++ ++++||++||+||++||++|+.++|.|++++++|+++++.+|+|+++.|..+
T Consensus 22 ~~~~g~~~p~f~l~--~~~G~~v~l-~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~ 98 (185)
T 2gs3_A 22 SMRCARSMHEFSAK--DIDGHMVNL-DKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 98 (185)
T ss_dssp GGGGCCCGGGCEEE--BTTSCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCC
T ss_pred hccCCCCcCCceeE--cCCCCEeeH-HHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCC
Confidence 45689999999964 569999999 8999999999999999999999999999999999988999999998654322
Q ss_pred hcHHHHHHHHHHcCCccceee--cCChh----HHHHh-------CC-----CceeEEEEECCCCcEEEEecCCCchhhHH
Q 001380 501 KDLEAIRNAVLRYGISHPVVN--DGDMN----LWREL-------GV-----NSWPTFAVVGPNGKLLAQLAGEGHRKDLD 562 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~v~~--d~~~~----l~~~~-------~v-----~~~Pt~~lid~~G~i~~~~~G~~~~~~l~ 562 (1089)
++.+.+++++++++++||++. |.++. +++.+ ++ ..+|++||||++|++++++.|..+.+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 178 (185)
T 2gs3_A 99 GSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIE 178 (185)
T ss_dssp SCHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGG
T ss_pred CCHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHH
Confidence 468899999999999999986 44443 33322 43 44799999999999999999988888888
Q ss_pred HHHHHH
Q 001380 563 DLVEAA 568 (1089)
Q Consensus 563 ~~l~~~ 568 (1089)
+.|+++
T Consensus 179 ~~i~~l 184 (185)
T 2gs3_A 179 KDLPHY 184 (185)
T ss_dssp GGHHHH
T ss_pred HHHHHh
Confidence 777765
No 116
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.84 E-value=1.3e-20 Score=195.31 Aligned_cols=145 Identities=14% Similarity=0.154 Sum_probs=127.3
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC--Ch
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD--NE 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~--~~ 500 (1089)
...+|+++|+|++. +.+|+.+++ ++++||++||+||++||++|+.++|.|++++++|+++ +.+|+|+++.+. .+
T Consensus 6 ~~~~g~~~p~f~l~--~~~G~~~~l-~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~ 81 (188)
T 2cvb_A 6 ELPLESPLIDAELP--DPRGGRYRL-SQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPE 81 (188)
T ss_dssp CCCTTCBCCCCEEE--CTTSCEEEG-GGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGG
T ss_pred cCCCCCCCCCceee--cCCCCEEeH-HHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccc
Confidence 45789999999964 569999999 8999999999999999999999999999999999988 999999874321 13
Q ss_pred hcHHHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEe--------cCCCchhhHHHHHHHHHHH
Q 001380 501 KDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQL--------AGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~--------~G~~~~~~l~~~l~~~l~~ 571 (1089)
++.+.+++|+++++++|+++.|.+.++++.|++.++|++||||++|+++++. .|..+.+++.+.|+.+++.
T Consensus 82 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 82 DAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 7889999999999999999999999999999999999999999999999881 2333678888888887753
No 117
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.84 E-value=6.5e-21 Score=199.45 Aligned_cols=147 Identities=13% Similarity=0.138 Sum_probs=120.3
Q ss_pred CCCCCCCCCccccCCCC-CceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--hh
Q 001380 425 KTTPIVPEFPAKLDWLN-TAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--EK 501 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~-g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~~ 501 (1089)
.....+|+|++ .+++ |+.++| ++++||+|||+|||+||++| .++|.|++++++|+++++.||+|+++.|.. .+
T Consensus 12 ~~~~~~pdF~l--~d~~~G~~v~L-s~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~ 87 (207)
T 2r37_A 12 GISGTIYEYGA--LTIDGEEYIPF-KQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPG 87 (207)
T ss_dssp ---CCGGGCEE--EBTTSSCEEEG-GGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCS
T ss_pred cccCccCCeEe--eeCCCCCEEcH-HHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCC
Confidence 45668999995 4569 999999 99999999999999999999 799999999999998899999999876633 34
Q ss_pred cHHHHHHHHH------HcCCccceeecCC--h----hHHHHh-----------C--------------CCceeEEEEECC
Q 001380 502 DLEAIRNAVL------RYGISHPVVNDGD--M----NLWREL-----------G--------------VNSWPTFAVVGP 544 (1089)
Q Consensus 502 ~~~~~~~~~~------~~~~~~~v~~d~~--~----~l~~~~-----------~--------------v~~~Pt~~lid~ 544 (1089)
+.+++++|++ +++++||++.|.+ + .++..+ + |...|++||||+
T Consensus 88 ~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~ 167 (207)
T 2r37_A 88 ENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGP 167 (207)
T ss_dssp CHHHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECT
T ss_pred CHHHHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECC
Confidence 6789999999 9999999986532 2 222211 1 233389999999
Q ss_pred CCcEEEEecCCCchhhHHHHHHHHHHHhccc
Q 001380 545 NGKLLAQLAGEGHRKDLDDLVEAALLFYGKK 575 (1089)
Q Consensus 545 ~G~i~~~~~G~~~~~~l~~~l~~~l~~~~~~ 575 (1089)
+|+|+.++.|....+.+++.|+.++++.+..
T Consensus 168 ~G~i~~~~~g~~~~~~l~~~I~~ll~~~~~~ 198 (207)
T 2r37_A 168 DGIPIMRWHHRTTVSNVKMDILSYMRRQAAL 198 (207)
T ss_dssp TSCEEEEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhhcccc
Confidence 9999999999888999999999998876544
No 118
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=99.84 E-value=5.4e-21 Score=204.32 Aligned_cols=206 Identities=17% Similarity=0.208 Sum_probs=149.6
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHH---cCCCCC---HHhHh---hhc-------CCCH----HHHHHHHHhhcC
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAE---MGVEVT---VEDFL---PFM-------GTGE----ANFLGGVASVKG 137 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~---~g~~~~---~~~~~---~~~-------~~~~----~~~~~~~~~~~~ 137 (1089)
|+|+|+||+||||+++...+..+...+++. .+.... ...+. ..+ .... ......+....+
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 479999999999999988777666555444 333211 11111 000 0011 112222333334
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCC
Q 001380 138 VKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADA 217 (1089)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~ 217 (1089)
+...........+.+.+...... ..++||+.++|+.|+++ ++++|+||.... ++.+|+. .+|+.++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~-~~f~~~~~~~~ 150 (230)
T 3vay_A 81 YDSDEAQQLADESFEVFLHGRHQ---VQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLA-DYFAFALCAED 150 (230)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTC---CCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTG-GGCSEEEEHHH
T ss_pred CChhhhHHHHHHHHHHHHHhhcc---CccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcH-HHeeeeEEccc
Confidence 33212223444444444444332 37899999999999999 999999998765 7888996 99999999999
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 218 FENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 218 ~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
.+..||++++|+.+++++|++|++|+||||+. +|+.+|+++|+.+++|.++....+. ...|++++.++.+| .++|.
T Consensus 151 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~l~el--~~~l~ 227 (230)
T 3vay_A 151 LGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHNLSQL--PEVLA 227 (230)
T ss_dssp HTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESSGGGH--HHHHH
T ss_pred cCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECCHHHH--HHHHH
Confidence 99999999999999999999999999999998 9999999999999999998643222 66899999999998 66654
No 119
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.84 E-value=1.5e-21 Score=202.12 Aligned_cols=145 Identities=17% Similarity=0.189 Sum_probs=121.8
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--h
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--E 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~ 500 (1089)
....++++|+|++ .+++|+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.||+|+++.+.. .
T Consensus 19 ~~~~~~~~p~f~l--~d~~G~~~~l-~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~ 95 (187)
T 3dwv_A 19 KMSAASSIFDFEV--LDADHKPYNL-VQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEP 95 (187)
T ss_dssp -CTTCCSGGGSCC--BBTTSCBCCG-GGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSS
T ss_pred hhcCCCccCCeEE--EcCCCCEeeH-HHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCC
Confidence 4567889999995 4669999999 899999999999999999999999999999999998899999999865422 3
Q ss_pred hcHHHHHHHHH-HcCCccceee--cCChhHH------------HHhCCCcee---EEEEECCCCcEEEEecCCCchhhHH
Q 001380 501 KDLEAIRNAVL-RYGISHPVVN--DGDMNLW------------RELGVNSWP---TFAVVGPNGKLLAQLAGEGHRKDLD 562 (1089)
Q Consensus 501 ~~~~~~~~~~~-~~~~~~~v~~--d~~~~l~------------~~~~v~~~P---t~~lid~~G~i~~~~~G~~~~~~l~ 562 (1089)
++.+.+++|++ +++++||++. |.++..+ ..|++..+| ++||||++|+|++++.|..+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~ 175 (187)
T 3dwv_A 96 GNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIE 175 (187)
T ss_dssp SBTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHH
T ss_pred CCHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHH
Confidence 57889999999 5699999986 4444332 234666778 9999999999999999999999999
Q ss_pred HHHHHHHH
Q 001380 563 DLVEAALL 570 (1089)
Q Consensus 563 ~~l~~~l~ 570 (1089)
+.|+++++
T Consensus 176 ~~i~~lL~ 183 (187)
T 3dwv_A 176 EKLIPLLG 183 (187)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99888775
No 120
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.84 E-value=1.2e-20 Score=188.07 Aligned_cols=141 Identities=21% Similarity=0.326 Sum_probs=127.4
Q ss_pred CCCCCCCC-CCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 424 RKTTPIVP-EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 424 ~~~g~~~P-~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
..+|+++| +|++. +.+|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+++|++ +++
T Consensus 3 l~~G~~~p~~f~l~--~~~g~~~~l-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~-----d~~ 74 (152)
T 2lja_A 3 LRSGNPSAASFSYP--DINGKTVSL-ADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSC-----DKN 74 (152)
T ss_dssp TTTTCCCSSSCEEE--ETTTEEEES-TTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEEC-----CSC
T ss_pred cccCCCCCcccEee--cCCCCEeeH-HHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEc-----cCc
Confidence 56899999 99954 569999999 8999999999999999999999999999999999988899999976 345
Q ss_pred HHHHHHHHHHcCCcc-ceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHh
Q 001380 503 LEAIRNAVLRYGISH-PVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~-~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
.+.++++++++++++ +++.|.+.++++.|+|.++|+++|||++|+++.++.|..+.+.+.++|+.+++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 75 KKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp HHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 688999999999997 6778888999999999999999999999999999999888899999998877643
No 121
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=99.84 E-value=1.9e-20 Score=200.53 Aligned_cols=124 Identities=20% Similarity=0.261 Sum_probs=113.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIV 244 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~ 244 (1089)
.++||+.++|+.|+++|++++|+||.....++..++.+|+. .+|+.++++++....||++.+|+.+++++|++|++|+|
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 173 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR-DGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 173 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH-hhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 68999999999999999999999999999999999999996 99999999999999999999999999999999999999
Q ss_pred EcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 245 IEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 245 VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
|||+.+|+.+|+++|+.++++.++....+.....|++++.++.++
T Consensus 174 iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 218 (232)
T 1zrn_A 174 VASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 218 (232)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence 999999999999999999999987533222345799999998877
No 122
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.84 E-value=7.9e-21 Score=194.99 Aligned_cols=135 Identities=14% Similarity=0.229 Sum_probs=117.7
Q ss_pred cCCCCCC----CCCCccccCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCC
Q 001380 423 NRKTTPI----VPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497 (1089)
Q Consensus 423 ~~~~g~~----~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~ 497 (1089)
..++|+. +|+|++. +.+|++++| ++++||++||+|| ++||++|+.++|.|++++++|+++++.||+|+.
T Consensus 20 ~l~~Gd~ig~~aP~f~l~--~~~G~~v~l-~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~--- 93 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLM--LSGSTCKTL-SDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSR--- 93 (179)
T ss_dssp SSCTTCBCCHHHHHCCEE--EGGGEEECG-GGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES---
T ss_pred ccCcCcccCCcCCCeeEE--CCCCCEEeH-HHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcC---
Confidence 4567777 9999965 559999999 9999999999999 999999999999999999999999999999985
Q ss_pred CChhcHHHHHHHHHHcCCccceeecCChhHHHHhCCCc------------eeEEEEECCCCcEEEEecCCCchhhHHHHH
Q 001380 498 DNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNS------------WPTFAVVGPNGKLLAQLAGEGHRKDLDDLV 565 (1089)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~------------~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l 565 (1089)
++.+.+++|+++++++||++.|.+.++++.|++.. .|++||||++|+|++.+.+......+++++
T Consensus 94 ---D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il 170 (179)
T 3ixr_A 94 ---DSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVL 170 (179)
T ss_dssp ---CCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHH
T ss_pred ---CCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHH
Confidence 46788999999999999999999999999999964 588999999999999986655444444444
Q ss_pred H
Q 001380 566 E 566 (1089)
Q Consensus 566 ~ 566 (1089)
+
T Consensus 171 ~ 171 (179)
T 3ixr_A 171 N 171 (179)
T ss_dssp H
T ss_pred H
Confidence 3
No 123
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3.4e-21 Score=196.34 Aligned_cols=141 Identities=24% Similarity=0.345 Sum_probs=109.1
Q ss_pred CCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--hhcH
Q 001380 426 TTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--EKDL 503 (1089)
Q Consensus 426 ~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~~~~ 503 (1089)
-+..+|+|++ .+++|+++++ ++++||++||+||++||++|+ ++|.|++++++|+++++.||+|+++.+.. .++.
T Consensus 8 ~~~~~~~f~l--~d~~G~~~~l-~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~ 83 (171)
T 3cmi_A 8 HMSEFYKLAP--VDKKGQPFPF-DQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSD 83 (171)
T ss_dssp --CGGGGCCC--BBTTSCBCCG-GGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC-------
T ss_pred chhheeeeEE--EcCCCCEecH-HHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCH
Confidence 4678999995 4569999999 899999999999999999999 99999999999998889999998854432 2567
Q ss_pred HHHHHHH-HHcCCccceeecCC--hh----HH-----HHhCCCcee------EEEEECCCCcEEEEecCCCchhhHHHHH
Q 001380 504 EAIRNAV-LRYGISHPVVNDGD--MN----LW-----RELGVNSWP------TFAVVGPNGKLLAQLAGEGHRKDLDDLV 565 (1089)
Q Consensus 504 ~~~~~~~-~~~~~~~~v~~d~~--~~----l~-----~~~~v~~~P------t~~lid~~G~i~~~~~G~~~~~~l~~~l 565 (1089)
+.+++|+ ++++++||++.|.+ +. ++ +.|++.++| ++||||++|++++++.|..+.+.+.+.|
T Consensus 84 ~~~~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 163 (171)
T 3cmi_A 84 EEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETI 163 (171)
T ss_dssp -----------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHH
T ss_pred HHHHHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHH
Confidence 8899999 99999999998643 22 11 358999999 9999999999999999988999999999
Q ss_pred HHHHH
Q 001380 566 EAALL 570 (1089)
Q Consensus 566 ~~~l~ 570 (1089)
+++++
T Consensus 164 ~~ll~ 168 (171)
T 3cmi_A 164 EELLK 168 (171)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 98875
No 124
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=99.84 E-value=2.9e-20 Score=205.81 Aligned_cols=210 Identities=15% Similarity=0.173 Sum_probs=150.5
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHc---CCCCCHHhHhhhcCCCHH---HHHHHHHhhcCCCCCCHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEM---GVEVTVEDFLPFMGTGEA---NFLGGVASVKGVKGFDSEAAKKRF 150 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 150 (1089)
.++|+|+||+||||+++...+..++.++++++ ++................ .....+....+. ... .+
T Consensus 55 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~----~~ 127 (282)
T 3nuq_A 55 PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKV---NAL----EY 127 (282)
T ss_dssp CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSS---CHH----HH
T ss_pred CCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCC---CHH----HH
Confidence 46899999999999999887777777776663 333443332221110000 111222222222 222 22
Q ss_pred HHHHHHHhcCCCCCCCCccHHHHHHHHHhCCC--eEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCc----cCCCCC
Q 001380 151 FEIYLDKYAKPNSGIGFPGALELINQCKSKGL--KVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAF----ENLKPA 224 (1089)
Q Consensus 151 ~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi--~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~----~~~KP~ 224 (1089)
.+.+...........++||+.++|+.|+++|+ +++|+||+....++..++.+|+. .+|+.++++++. ...||+
T Consensus 128 ~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~-~~fd~v~~~~~~~~~~~~~Kp~ 206 (282)
T 3nuq_A 128 NRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA-DLFDGLTYCDYSRTDTLVCKPH 206 (282)
T ss_dssp HHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT-TSCSEEECCCCSSCSSCCCTTS
T ss_pred HHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc-cccceEEEeccCCCcccCCCcC
Confidence 22222211111124789999999999999999 99999999999999999999996 999999988765 457999
Q ss_pred HHHHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCC-eEEEEcCCCCHHHH-hhcCCcEEecCcccCCHHHHHh
Q 001380 225 PDIFLSASKILNVPT-SECIVIEDALAGVQAAKAAQM-RCIAVTTTLSEERL-KEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 225 ~~~~~~~l~~lgv~p-~~~v~VGD~~~Di~aA~~aG~-~~i~V~~g~~~~~l-~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
+++|+.+++++|+++ ++|+||||+.+|+.+|+++|+ .++++..+...+.+ ....+++++.++.+| .++|.
T Consensus 207 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el--~~~l~ 279 (282)
T 3nuq_A 207 VKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILEL--PHVVS 279 (282)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGG--GGTSG
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHH--HHHhh
Confidence 999999999999999 999999999999999999999 67777776543332 345789999999998 55543
No 125
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=99.84 E-value=2.8e-20 Score=201.40 Aligned_cols=203 Identities=12% Similarity=0.115 Sum_probs=141.2
Q ss_pred CCceEEEEecCCcccCCch-------HHHHHHHHHHHHcCCCCCHHh-HhhhcCCCHHHHHHHHHhhcCCCCCC--HHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEE-------PSRRAAVDVFAEMGVEVTVED-FLPFMGTGEANFLGGVASVKGVKGFD--SEAA 146 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~-------~~~~a~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 146 (1089)
+++++|+||+||||+|++. .....+.+.+++++......+ +..+.+.+...+...+....+..... ....
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~ 108 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQL 108 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHH
Confidence 3589999999999999874 334455566666665543232 33344555666665555443321111 1111
Q ss_pred HH-HHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHC--C---------CCCCCccEEEE
Q 001380 147 KK-RFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAA--G---------LPVSMFDAIVS 214 (1089)
Q Consensus 147 ~~-~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~--g---------l~~~~fd~i~~ 214 (1089)
.. .+.+.|.. . .....++||+.++|+. |++++|+||+.+..++..++.+ | +. .+|+.++.
T Consensus 109 ~~~~~~~~~~~-~--~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~-~~~~~~f~ 180 (253)
T 2g80_A 109 QGYVWAHGYES-G--QIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLN-SYIDGYFD 180 (253)
T ss_dssp HHHHHHHHHHT-T--SCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCG-GGCCEEEC
T ss_pred HHHHHHHHHHh-C--cccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchH-hhcceEEe
Confidence 11 12222221 1 1134789999999988 8999999999999999999977 4 64 67787776
Q ss_pred cCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 215 ADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 215 ~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
+ .+...||+|++|..+++++|++|++|+||||+.+|+++|+++||++++|.+.... .+....+++++.++.+|
T Consensus 181 ~-~~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 181 I-NTSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNA-PVPDGQKYQVYKNFETL 253 (253)
T ss_dssp H-HHHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSC-CCCSSCCSCEESCSTTC
T ss_pred e-eccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCC-CcccccCCCccCChhhC
Confidence 5 3313699999999999999999999999999999999999999999999873221 11122478889988775
No 126
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.84 E-value=8.4e-21 Score=197.99 Aligned_cols=147 Identities=16% Similarity=0.196 Sum_probs=129.8
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCC-EEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGK-VVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN-- 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk-~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~-- 499 (1089)
...+|+.+|+|++.. +++|+.+++ ++++|| ++||+||++||++|+.++|.|++++++|+++++.+|+|+++.+..
T Consensus 17 ~~~~g~~~p~f~l~~-~~~G~~~~l-~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~ 94 (196)
T 2ywi_A 17 MFPLGKQAPPFALTN-VIDGNVVRL-EDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYP 94 (196)
T ss_dssp CCCTTCBCCCCEEEE-TTTCCEEEH-HHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCG
T ss_pred CCCcCCcCCceeeee-cCCCCEEeH-HHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 356899999999540 569999999 899998 599999999999999999999999999998889999998753221
Q ss_pred hhcHHHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEE---------ecCCCchhhHHHHHHHHHH
Q 001380 500 EKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQ---------LAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~---------~~G~~~~~~l~~~l~~~l~ 570 (1089)
+++.+.+++|+++++++|+++.|.+.++++.|+|.++|++||||++|+++++ +.|..+.+++.+.|+.+++
T Consensus 95 ~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 95 EDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp GGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 3788999999999999999999999999999999999999999999999998 3566688899999988876
Q ss_pred H
Q 001380 571 F 571 (1089)
Q Consensus 571 ~ 571 (1089)
.
T Consensus 175 ~ 175 (196)
T 2ywi_A 175 G 175 (196)
T ss_dssp T
T ss_pred C
Confidence 4
No 127
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.84 E-value=9.9e-21 Score=191.23 Aligned_cols=139 Identities=15% Similarity=0.194 Sum_probs=123.3
Q ss_pred CCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcc-hhhhhhhHHHHHHHcCC----CCEEEEEEeCCCCCChhcH
Q 001380 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCIN-CMHVLPDLEFLEKKYKD----MPFTVVGVHSAKFDNEKDL 503 (1089)
Q Consensus 429 ~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~-C~~~~p~l~~l~~~~~~----~~v~vi~v~~~~~~~~~~~ 503 (1089)
.+|+|++. +.+|+++++ ++++||++||+||++||++ |+.++|.|++++++|++ .++.+|+|+++ ...+++
T Consensus 2 ~ap~f~l~--~~~G~~~~l-~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d--~~~d~~ 76 (164)
T 2ggt_A 2 LGGPFSLT--THTGERKTD-KDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID--PERDTK 76 (164)
T ss_dssp CCCCCEEE--ETTSCEEEG-GGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC--TTTCCH
T ss_pred CCCCeEEE--eCCCCEEeH-HHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC--CCCCCH
Confidence 57999964 559999999 8999999999999999998 99999999999999975 48999999874 223568
Q ss_pred HHHHHHHHHcCCccceee---cCChhHHHHhCCCcee---------------EEEEECCCCcEEEEecCCCchhhHHHHH
Q 001380 504 EAIRNAVLRYGISHPVVN---DGDMNLWRELGVNSWP---------------TFAVVGPNGKLLAQLAGEGHRKDLDDLV 565 (1089)
Q Consensus 504 ~~~~~~~~~~~~~~~v~~---d~~~~l~~~~~v~~~P---------------t~~lid~~G~i~~~~~G~~~~~~l~~~l 565 (1089)
+.+++|+++++++|+++. |...++++.|+|..+| ++||||++|+++.++.|..+.+++.+.|
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 156 (164)
T 2ggt_A 77 EAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASI 156 (164)
T ss_dssp HHHHHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHH
Confidence 899999999999999884 4456799999999999 8999999999999999998999999999
Q ss_pred HHHHHHh
Q 001380 566 EAALLFY 572 (1089)
Q Consensus 566 ~~~l~~~ 572 (1089)
+++++.+
T Consensus 157 ~~ll~~~ 163 (164)
T 2ggt_A 157 ATHMRPY 163 (164)
T ss_dssp HHHHGGG
T ss_pred HHHHHhc
Confidence 9988765
No 128
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=99.84 E-value=8.2e-21 Score=197.61 Aligned_cols=124 Identities=19% Similarity=0.198 Sum_probs=107.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCC-CcEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPT-SECI 243 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p-~~~v 243 (1089)
.++||+.++|+.|+++|++++|+||.....+...+. .+|+.+++++++...||+|++|.++++++|+.+ ++|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~------~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v 109 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA------PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCV 109 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT------TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC------ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEE
Confidence 689999999999999999999999988877644332 357899999999999999999999999999975 8999
Q ss_pred EEcCChhhHHHHHHcCCeEEEEcCCCC------------------------HHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 244 VIEDALAGVQAAKAAQMRCIAVTTTLS------------------------EERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 244 ~VGD~~~Di~aA~~aG~~~i~V~~g~~------------------------~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
||||+.+||++|+++||.+|+|.+|.. .+++...+|+++++++.+| ..+|.
T Consensus 110 ~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL--~~~l~ 184 (196)
T 2oda_A 110 LISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGEL--ESCLA 184 (196)
T ss_dssp EEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGH--HHHHH
T ss_pred EEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHH--HHHHH
Confidence 999999999999999999999999753 2344567899999999998 55553
No 129
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.84 E-value=1.5e-20 Score=189.17 Aligned_cols=134 Identities=15% Similarity=0.136 Sum_probs=118.9
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCC-EEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGK-VVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk-~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
..+|+++|+|++. +.+|+.+++ ++++|| ++||+|| ++||++|+.++|.|++++++|++.++.+|+|++ +
T Consensus 9 ~~~G~~~p~f~l~--~~~G~~~~l-~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~------d 79 (160)
T 1xvw_A 9 LNVGATAPDFTLR--DQNQQLVTL-RGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISV------G 79 (160)
T ss_dssp CCTTSBCCCCEEE--CTTSCEEEG-GGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEES------C
T ss_pred CCCCCCCCCeEeE--cCCCCEEeH-HHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeC------C
Confidence 5689999999964 559999999 899998 9999998 999999999999999999999988899999986 3
Q ss_pred cHHHHHHHHHHcCCccceeecC--ChhHHHHhCCC----cee--EEEEECCCCcEEEEecCCCchh-hHHHHHH
Q 001380 502 DLEAIRNAVLRYGISHPVVNDG--DMNLWRELGVN----SWP--TFAVVGPNGKLLAQLAGEGHRK-DLDDLVE 566 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~~~~v~~d~--~~~l~~~~~v~----~~P--t~~lid~~G~i~~~~~G~~~~~-~l~~~l~ 566 (1089)
+.+.+++|+++++++|+++.|. +.++++.|++. ++| ++||||++|+|++++.|....+ .++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 153 (160)
T 1xvw_A 80 PPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTD 153 (160)
T ss_dssp CHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHH
T ss_pred CHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHH
Confidence 6788999999999999999995 89999999998 999 9999999999999998876443 4444443
No 130
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.84 E-value=1.9e-20 Score=182.48 Aligned_cols=135 Identities=27% Similarity=0.417 Sum_probs=123.0
Q ss_pred CCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHH
Q 001380 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508 (1089)
Q Consensus 429 ~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~ 508 (1089)
++|+|++. +.+|+.+++ ++++||++||+||++||++|+.++|.|+++++++++ ++.+++|+....+.+++.+.+++
T Consensus 1 ~~p~f~l~--~~~g~~~~l-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~ 76 (138)
T 4evm_A 1 EVADFELM--GVDGKTYRL-SDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKN 76 (138)
T ss_dssp CCCCCEEE--BTTSCEEEG-GGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHH
T ss_pred CCCcceeE--CCCCCEEEH-HHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHH
Confidence 47999964 559999999 899999999999999999999999999999999654 69999997766667889999999
Q ss_pred HHHHcCC-ccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHH
Q 001380 509 AVLRYGI-SHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 509 ~~~~~~~-~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~ 567 (1089)
+++++++ +|+++.|.+.++++.|++.++|++++||++|+++.++.|..+.+++.+.|++
T Consensus 77 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 77 WYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp HHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred HHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 9999999 8999999999999999999999999999999999999999888888877764
No 131
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.84 E-value=1.1e-20 Score=188.45 Aligned_cols=137 Identities=22% Similarity=0.229 Sum_probs=117.4
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
....|+.+|+|++. +.+|+.+++ ++++||++||+||++||++|+.++|.|++++++|+++++.+|+|++ ++.
T Consensus 8 ~~~~g~~~p~f~l~--~~~G~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~-----d~~ 79 (152)
T 2lrt_A 8 DKIKEASIIDIQLK--DLKGNTRSL-TDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISL-----DGD 79 (152)
T ss_dssp SSSCTTCSCCCCEE--BTTSCEECT-TTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEC-----SCC
T ss_pred hhccCCCCCCeEEE--cCCCCEEeH-HHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEc-----cCC
Confidence 34578999999964 569999999 8999999999999999999999999999999999988999999987 344
Q ss_pred HHHHHHHHHHcCCccceeecCChh---HHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHh
Q 001380 503 LEAIRNAVLRYGISHPVVNDGDMN---LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d~~~~---l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
.+.++++.++ ++|+++.|.++. +++.|++.++|++||||++|++++++.|.. ++++.+..+++.+
T Consensus 80 ~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~---~~e~~~~~~~~~~ 147 (152)
T 2lrt_A 80 EHFWKTSADN--LPWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIK---DLDEAIKKLLEGH 147 (152)
T ss_dssp HHHHHHHHTT--CSSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCS---CHHHHHHHHHGGG
T ss_pred HHHHHHHHhC--CCceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHH---HHHHHHHHHHhcc
Confidence 5677887754 789999999886 999999999999999999999999988764 4555566655543
No 132
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.83 E-value=1.5e-20 Score=194.34 Aligned_cols=142 Identities=23% Similarity=0.406 Sum_probs=126.0
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
...+|.++|+|++. +.+|+++++ ++++||++||+||++||++|+.++|.|++++++|++.++.+|+|+++ .++
T Consensus 33 ~~~~g~~~p~f~l~--~~~G~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d----~~~ 105 (186)
T 1jfu_A 33 MASAPLKLPDLAFE--DADGKPKKL-SDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINID----TRD 105 (186)
T ss_dssp ECCSCCBCCCCEEE--CTTSCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECC----CSC
T ss_pred cccCCCcCCCcEeE--cCCCCEeeH-HHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECC----CCC
Confidence 55789999999964 569999999 89999999999999999999999999999999999778999999873 234
Q ss_pred HHHHHHHHHHcCCc-cceeecCChhHHHHhCCC----ceeEEEEECCCCcEEEEecCCCc--hhhHHHHHHHHHHH
Q 001380 503 LEAIRNAVLRYGIS-HPVVNDGDMNLWRELGVN----SWPTFAVVGPNGKLLAQLAGEGH--RKDLDDLVEAALLF 571 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~-~~v~~d~~~~l~~~~~v~----~~Pt~~lid~~G~i~~~~~G~~~--~~~l~~~l~~~l~~ 571 (1089)
.+.+++++++++++ ++++.|.+..+++.|++. ++|++||||++|++++++.|... .+++.+.|+.+++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 106 PEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp TTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 57889999999995 899999999999999996 89999999999999999988764 67888888887754
No 133
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.83 E-value=1.1e-20 Score=200.02 Aligned_cols=143 Identities=11% Similarity=0.131 Sum_probs=120.6
Q ss_pred hccCCCCCCCCCCccccCCCCC--ceeeccccc-CCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCC
Q 001380 421 VENRKTTPIVPEFPAKLDWLNT--APLQFRRDL-KGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496 (1089)
Q Consensus 421 ~~~~~~g~~~P~f~~~~~~~~g--~~~~l~~~~-~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~ 496 (1089)
|....+|+++|+|++...+.+| +++++ +++ +||++||+|| ++||++|+.++|.|++++++|+++++.||+|++
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L-~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~-- 98 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDL-SSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISV-- 98 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEG-GGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEES--
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeH-HHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeC--
Confidence 3346799999999964322278 89999 899 9999999999 999999999999999999999888899999986
Q ss_pred CCChhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCC-----CceeEEEEECCCCcEEEEecCC----Cchhh
Q 001380 497 FDNEKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGV-----NSWPTFAVVGPNGKLLAQLAGE----GHRKD 560 (1089)
Q Consensus 497 ~~~~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v-----~~~Pt~~lid~~G~i~~~~~G~----~~~~~ 560 (1089)
++.+.+++|++++ +++||++.|.+.++++.|++ ..+|++||||++|+|++.+.|. .+.++
T Consensus 99 ----D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~e 174 (221)
T 2c0d_A 99 ----DSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQE 174 (221)
T ss_dssp ----SCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHH
T ss_pred ----CCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHH
Confidence 4567788999988 78999999999999999999 4799999999999999998764 34567
Q ss_pred HHHHHHHHHH
Q 001380 561 LDDLVEAALL 570 (1089)
Q Consensus 561 l~~~l~~~l~ 570 (1089)
+.+.|+.+..
T Consensus 175 ll~~l~~L~~ 184 (221)
T 2c0d_A 175 VLRTIDSIIH 184 (221)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7777776554
No 134
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=99.83 E-value=3.2e-21 Score=201.88 Aligned_cols=124 Identities=19% Similarity=0.274 Sum_probs=111.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIV 244 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~ 244 (1089)
.++||+.+ |+.|+++ ++++|+||.....++..++++|+. .+|+.++++++....||++++|..+++++| |++|+|
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~ 148 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL-RYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL 148 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH-HhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence 78999999 9999999 999999999999999999999996 999999999999999999999999999999 999999
Q ss_pred EcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHH
Q 001380 245 IEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDIL 295 (1089)
Q Consensus 245 VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll 295 (1089)
|||+.+|+++|+++|+.+++|.++....+.....|++++.++.++ .++|
T Consensus 149 vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el--~~~l 197 (201)
T 2w43_A 149 VSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKEL--YEWI 197 (201)
T ss_dssp EESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHH--HHHH
T ss_pred EeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHH--HHHH
Confidence 999999999999999999999996532222345799999999887 4444
No 135
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.83 E-value=1.3e-20 Score=194.68 Aligned_cols=138 Identities=17% Similarity=0.108 Sum_probs=120.6
Q ss_pred CCCCCCCCCccccCCC-CC--ceeecccccCCCEEEEEEec-CCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh
Q 001380 425 KTTPIVPEFPAKLDWL-NT--APLQFRRDLKGKVVVLDFWT-YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~-~g--~~~~l~~~~~gk~vll~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~ 500 (1089)
.+|+++|+|++. ++ +| +++++ ++++||++||+||+ +||++|+.++|.|++++++|+++++.||+|++
T Consensus 2 ~~G~~aP~f~l~--~~~~G~~~~v~l-~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~------ 72 (186)
T 1n8j_A 2 LINTKIKPFKNQ--AFKNGEFIEVTE-KDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVST------ 72 (186)
T ss_dssp CTTCBCCCCEEE--EEETTEEEEEEH-HHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEES------
T ss_pred CCCCcCCCcEee--cccCCcceEEEH-HHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEEC------
Confidence 479999999964 44 58 89999 89999999999995 99999999999999999999888999999986
Q ss_pred hcHHHHHHHHHHc----CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCC----chhhHHHHHH
Q 001380 501 KDLEAIRNAVLRY----GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEG----HRKDLDDLVE 566 (1089)
Q Consensus 501 ~~~~~~~~~~~~~----~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~----~~~~l~~~l~ 566 (1089)
++.+.+++|++++ +++||++.|.+.++++.||+. .+|++||||++|+|++.+.|.. +.+++.+.|+
T Consensus 73 d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~ 152 (186)
T 1n8j_A 73 DTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIK 152 (186)
T ss_dssp SCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 3567789999999 899999999999999999997 4799999999999999987754 4667777777
Q ss_pred HHHHH
Q 001380 567 AALLF 571 (1089)
Q Consensus 567 ~~l~~ 571 (1089)
.+...
T Consensus 153 ~l~~~ 157 (186)
T 1n8j_A 153 AAQYV 157 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 136
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.83 E-value=5.3e-21 Score=197.22 Aligned_cols=142 Identities=13% Similarity=0.149 Sum_probs=119.4
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC--h
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN--E 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~--~ 500 (1089)
...+|+.+|+|+++ +++|+++++ ++++||++||+||++||++|+.++|.|++++++|+++++.+|+|+++.+.. .
T Consensus 20 ~~~~g~~~p~f~l~--~~~G~~~~l-~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~ 96 (183)
T 2obi_A 20 DWRCARSMHEFSAK--DIDGHMVNL-DKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 96 (183)
T ss_dssp CGGGCCSGGGCEEE--BTTSCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCC
T ss_pred CCcccCcccceEEE--cCCCCEeeH-HHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCC
Confidence 45789999999964 569999999 899999999999999999999999999999999998889999999865432 3
Q ss_pred hcHHHHHHHHHHcCCccceee--cCChhHH----HHh-------C-----CCceeEEEEECCCCcEEEEecCCCchhhHH
Q 001380 501 KDLEAIRNAVLRYGISHPVVN--DGDMNLW----REL-------G-----VNSWPTFAVVGPNGKLLAQLAGEGHRKDLD 562 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~v~~--d~~~~l~----~~~-------~-----v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~ 562 (1089)
++.+.+++|+++++++||++. |.++..+ +.+ + +..+|++||||++|++++++.|..+.+++.
T Consensus 97 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 176 (183)
T 2obi_A 97 GSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIE 176 (183)
T ss_dssp SCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHH
T ss_pred CCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHH
Confidence 578899999999999999986 6555433 222 5 445799999999999999999988877776
Q ss_pred HHHHH
Q 001380 563 DLVEA 567 (1089)
Q Consensus 563 ~~l~~ 567 (1089)
+.|++
T Consensus 177 ~~i~~ 181 (183)
T 2obi_A 177 KDLPH 181 (183)
T ss_dssp TTSGG
T ss_pred HHHHH
Confidence 66543
No 137
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.83 E-value=1.7e-20 Score=233.02 Aligned_cols=233 Identities=20% Similarity=0.237 Sum_probs=177.8
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~ 676 (1089)
...+..|.+|++++.+++|||+|..+++|.+++++|... +.. .. ......+..|.||++++.++.|||+|.
T Consensus 402 ~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~---~~~-~~-----~~i~~~~~~P~glavD~~~g~LY~tD~ 472 (699)
T 1n7d_A 402 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG---VSS-YD-----TVISRDIQAPDGLAVDWIHSNIYWTDS 472 (699)
T ss_dssp SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC----CC-CC-----CBCCSCC--CCCEECCCSSSBCEECCT
T ss_pred eccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCC---Ccc-eE-----EEEeCCCCCcceEEEEeeCCcEEEEec
Confidence 345788999999988999999999999999999987310 000 00 011123568999999976666999999
Q ss_pred CCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC-cEEEEEECCCCeEEEEeC
Q 001380 677 ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ-HQIWEHSTVDGVTRAFSG 755 (1089)
Q Consensus 677 ~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~-~~I~~~~~~~g~~~~~~g 755 (1089)
.+++|.+++++++.++++...+ +..|.+|+++|.++.|||++++. ++|+++++.+...+.+.
T Consensus 473 ~~~~I~v~d~dg~~~~~l~~~~----------------~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~- 535 (699)
T 1n7d_A 473 VLGTVSVADTKGVKRKTLFREQ----------------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV- 535 (699)
T ss_dssp TTSCEEEEBSSSCCEEEECCCS----------------SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES-
T ss_pred cCCeEEEEecCCCceEEEEeCC----------------CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE-
Confidence 9999999999988887775322 45899999999888999999886 89999887654443332
Q ss_pred CCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcccccc
Q 001380 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVL 835 (1089)
Q Consensus 756 ~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~ 835 (1089)
...+.+|+||++++++++|||+|+.+++|+++++++...+++... ...
T Consensus 536 -------------~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~-------------------~~~ 583 (699)
T 1n7d_A 536 -------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED-------------------EKR 583 (699)
T ss_dssp -------------CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCC-------------------SSS
T ss_pred -------------eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEec-------------------CCc
Confidence 134678999999998889999999999999999987655555321 123
Q ss_pred ccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 836 LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 836 l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
+.+|.||+++. +.|||+|+.+++|.++++.++...+.... .+..|.+|++..
T Consensus 584 ~~~P~glavd~-~~lywtd~~~~~V~~~d~~~G~~~~~i~~-------------~~~~P~~i~v~~ 635 (699)
T 1n7d_A 584 LAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLAE-------------NLLSPEDMVLFH 635 (699)
T ss_dssp CSSCCCCEEET-TEEEEECSTTTCEEEEETTTEEEEECCCT-------------TCSSCCCCCBCS
T ss_pred CCCceEeEEEC-CEEEEEeCCCCeEEEEEccCCCceEEeec-------------CCCCCcEEEEeC
Confidence 67899999985 48999999999999999877665554322 355688888764
No 138
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.83 E-value=3e-20 Score=180.88 Aligned_cols=133 Identities=27% Similarity=0.436 Sum_probs=121.5
Q ss_pred CCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHH
Q 001380 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAI 506 (1089)
Q Consensus 427 g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~ 506 (1089)
|.++|+|++. +++|+.+++ ++++||++||+||++||++|+.++|.|++++++++ ++.+++|++ +++.+.+
T Consensus 2 ~~~~p~~~~~--~~~g~~~~l-~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~-----~~~~~~~ 71 (136)
T 1zzo_A 2 VPAQLQFSAK--TLDGHDFHG-ESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAG-----LDQVPAM 71 (136)
T ss_dssp CCGGGCCEEE--BTTSCEEEG-GGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEEC-----SSCHHHH
T ss_pred CCCCCCcccc--cCCCCEeeH-HHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeC-----CCCHHHH
Confidence 6789999964 569999999 88999999999999999999999999999999998 699999975 4678899
Q ss_pred HHHHHHcCC-ccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 507 RNAVLRYGI-SHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 507 ~~~~~~~~~-~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+++++++++ +|+++.|.+..+++.|++.++|++++||++|+++ ++.|..+.+.+.+.|+++++
T Consensus 72 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 72 QEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred HHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 999999999 9999999999999999999999999999999999 99999888889888887654
No 139
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.83 E-value=4.6e-20 Score=187.74 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=123.5
Q ss_pred CCCccccCCCCCceeecccccCCCEEEEEEecCCCcc-hhhhhhhHHHHHHHcCC----CCEEEEEEeCCCCCChhcHHH
Q 001380 431 PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCIN-CMHVLPDLEFLEKKYKD----MPFTVVGVHSAKFDNEKDLEA 505 (1089)
Q Consensus 431 P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~-C~~~~p~l~~l~~~~~~----~~v~vi~v~~~~~~~~~~~~~ 505 (1089)
|+|++. +.+|+.+++ ++++||++||+||++||++ |+.++|.|++++++|++ .++.+|+|+++ ...++++.
T Consensus 7 p~f~l~--~~~G~~~~l-~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d--~~~d~~~~ 81 (171)
T 2rli_A 7 GDFHLL--DHRGRARCK-ADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD--PERDDVEA 81 (171)
T ss_dssp SCCEEE--ETTSCEEET-TTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC--STTCCHHH
T ss_pred CCeEEE--eCCCCEEeH-HHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC--CCCCCHHH
Confidence 899864 559999999 8999999999999999998 99999999999999963 57999999874 12357889
Q ss_pred HHHHHHHcCCccceeecCC---hhHHHHhCCCcee---------------EEEEECCCCcEEEEecCCCchhhHHHHHHH
Q 001380 506 IRNAVLRYGISHPVVNDGD---MNLWRELGVNSWP---------------TFAVVGPNGKLLAQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 506 ~~~~~~~~~~~~~v~~d~~---~~l~~~~~v~~~P---------------t~~lid~~G~i~~~~~G~~~~~~l~~~l~~ 567 (1089)
+++|+++++++|+++.+.. .++++.|+|..+| ++||||++|+++.++.|..+.+++.+.|++
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 82 MARYVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 9999999999999998753 4789999999988 999999999999999999999999999999
Q ss_pred HHHHhcc
Q 001380 568 ALLFYGK 574 (1089)
Q Consensus 568 ~l~~~~~ 574 (1089)
+++.++.
T Consensus 162 ll~~~~~ 168 (171)
T 2rli_A 162 HMAAFRS 168 (171)
T ss_dssp HHHHHCC
T ss_pred HHHHHHh
Confidence 9987653
No 140
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.83 E-value=1.5e-20 Score=191.90 Aligned_cols=143 Identities=20% Similarity=0.265 Sum_probs=122.4
Q ss_pred ccCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCc-chhhhhhhHHHHHHHcCCCC--EEEEEEeCCCCC
Q 001380 422 ENRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCI-NCMHVLPDLEFLEKKYKDMP--FTVVGVHSAKFD 498 (1089)
Q Consensus 422 ~~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~-~C~~~~p~l~~l~~~~~~~~--v~vi~v~~~~~~ 498 (1089)
....+|+.+|+|++. +.+|+.+++ ++++||++||+||++||+ +|+.++|.|++++++|++.+ +.||+|+++.
T Consensus 5 ~~l~~g~~~p~f~l~--~~~G~~~~l-~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~-- 79 (174)
T 1xzo_A 5 IKDPLNYEVEPFTFQ--NQDGKNVSL-ESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP-- 79 (174)
T ss_dssp CCSCCCEECCCCEEE--CTTSCEEET-GGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT--
T ss_pred CcCccccccCCcEEE--cCCCCEEeh-hhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC--
Confidence 356789999999964 569999999 889999999999999999 99999999999999998665 9999998731
Q ss_pred ChhcHHHHHHHHHHcCCcc---ceeecCChhHHHHh----------------CCCceeEEEEECCCCcEEEEecCCC--c
Q 001380 499 NEKDLEAIRNAVLRYGISH---PVVNDGDMNLWREL----------------GVNSWPTFAVVGPNGKLLAQLAGEG--H 557 (1089)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~---~v~~d~~~~l~~~~----------------~v~~~Pt~~lid~~G~i~~~~~G~~--~ 557 (1089)
..++.+.+++|+++++++| +++.|.+.++.+.| ++...|++||||++|+|++++.|.. +
T Consensus 80 ~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~ 159 (174)
T 1xzo_A 80 ENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTP 159 (174)
T ss_dssp TTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCC
T ss_pred CCCCHHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCC
Confidence 2257889999999999998 88899888777665 4578999999999999999998876 4
Q ss_pred hhhHHHHHHHHH
Q 001380 558 RKDLDDLVEAAL 569 (1089)
Q Consensus 558 ~~~l~~~l~~~l 569 (1089)
.+++.+.|++++
T Consensus 160 ~~~l~~~l~~ll 171 (174)
T 1xzo_A 160 YDDIISDVKSAS 171 (174)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 677777777665
No 141
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.82 E-value=4e-20 Score=191.33 Aligned_cols=138 Identities=19% Similarity=0.178 Sum_probs=123.5
Q ss_pred CCCCCCCCCccccCCCCCc----eeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 425 KTTPIVPEFPAKLDWLNTA----PLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~g~----~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
.+|+++|+|++. +.+|+ ++++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.+|+|++
T Consensus 2 ~~G~~~P~f~l~--~~~g~~~~~~~~l-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~----- 73 (187)
T 1we0_A 2 LIGTEVQPFRAQ--AFQSGKDFFEVTE-ADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVST----- 73 (187)
T ss_dssp CTTCBCCCCEEE--EECSSSCCEEEET-TTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEES-----
T ss_pred CCCCcCCCeEEe--ccCCCccceEecH-HHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEEC-----
Confidence 579999999965 45888 9999 8999999999999 999999999999999999999887899999986
Q ss_pred hhcHHHHHHHHHHc----CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCC----chhhHHHHH
Q 001380 500 EKDLEAIRNAVLRY----GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEG----HRKDLDDLV 565 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~----~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~----~~~~l~~~l 565 (1089)
++.+.+++|++++ +++|+++.|.+.++++.|++. ++|++||||++|++++++.|.. +.+++.+.|
T Consensus 74 -d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l 152 (187)
T 1we0_A 74 -DTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKV 152 (187)
T ss_dssp -SCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHH
T ss_pred -CCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHH
Confidence 3467788999988 899999999999999999999 9999999999999999988764 577888888
Q ss_pred HHHHHH
Q 001380 566 EAALLF 571 (1089)
Q Consensus 566 ~~~l~~ 571 (1089)
+.+...
T Consensus 153 ~~l~~~ 158 (187)
T 1we0_A 153 KAAQYV 158 (187)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 877654
No 142
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.82 E-value=3.3e-20 Score=180.77 Aligned_cols=131 Identities=27% Similarity=0.400 Sum_probs=119.2
Q ss_pred CCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHH
Q 001380 428 PIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIR 507 (1089)
Q Consensus 428 ~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~ 507 (1089)
.++|+|++ .+++|+.+++ ++++||++||+||++||++|+.++|.|++++++++ ++.+++|++ +++.+.++
T Consensus 2 ~~~p~~~l--~~~~g~~~~l-~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~-----~~~~~~~~ 71 (136)
T 1lu4_A 2 DERLQFTA--TTLSGAPFDG-ASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIAT-----RADVGAMQ 71 (136)
T ss_dssp GGGGCCEE--EBTTSCEEEG-GGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEEC-----SSCHHHHH
T ss_pred CCCCCeEe--ecCCCCeecH-HHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEc-----CCCHHHHH
Confidence 35789985 4569999999 88999999999999999999999999999999998 799999976 45789999
Q ss_pred HHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEec---CCCchhhHHHHHHHHH
Q 001380 508 NAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLA---GEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 508 ~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~---G~~~~~~l~~~l~~~l 569 (1089)
+++++++++|+++.|.+.++++.|++.++|+++++|++|+++ ++. |..+.+++.+.|++++
T Consensus 72 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 72 SFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp HHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred HHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 988 9888888888887654
No 143
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.82 E-value=1.6e-20 Score=199.70 Aligned_cols=130 Identities=15% Similarity=0.168 Sum_probs=112.4
Q ss_pred ccCCCCCCCCCCccccC-CCCCceeecccccCCCEEEEEEec-CCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 422 ENRKTTPIVPEFPAKLD-WLNTAPLQFRRDLKGKVVVLDFWT-YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 422 ~~~~~g~~~P~f~~~~~-~~~g~~~~l~~~~~gk~vll~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
....+|+++|+|++... +-+|+++++ ++++||++||+||+ +||++|+.++|.|++++++|+++++.||+|++
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l-~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~----- 111 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICL-KDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACST----- 111 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEG-GGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEES-----
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeH-HHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEEC-----
Confidence 45689999999997532 335689999 99999999999996 99999999999999999999988999999986
Q ss_pred hhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCCch
Q 001380 500 EKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEGHR 558 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~~~ 558 (1089)
++.+..+++++++ +++|+++.|.+.++++.|++. .+|++||||++|+|++.+.|....
T Consensus 112 -D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~ 182 (222)
T 3ztl_A 112 -DSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPV 182 (222)
T ss_dssp -SCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTB
T ss_pred -CCHHHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCC
Confidence 3455566777765 899999999999999999998 899999999999999998776543
No 144
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.82 E-value=4e-20 Score=192.70 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=121.5
Q ss_pred cCCCCCCCCCCccccCCCC-------------C--ceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLN-------------T--APLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMP 486 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~-------------g--~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~ 486 (1089)
...+|+++|+|++... + | +++++ ++++||++||+|| ++||++|+.++|.|++++++|++++
T Consensus 3 ~l~~G~~~P~f~l~~~--~~~~~~~~~~~~~~G~~~~v~l-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~ 79 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTAL--IGGDLSKVDAKQPGDYFTTITS-DEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRD 79 (195)
T ss_dssp BCCTTCBCCCCEEEEE--CSSCGGGSCCSSGGGGEEEEET-TSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTT
T ss_pred cCCCCCcCCCcCcccc--cccccccccccccCCCccEeeH-HHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 4678999999997543 5 6 79999 9999999999999 9999999999999999999999888
Q ss_pred EEEEEEeCCCCCChhcHHHHHHHHHHc----CCccceeecCChhHHHHhCCC-----ceeEEEEECCCCcEEEEecCCC-
Q 001380 487 FTVVGVHSAKFDNEKDLEAIRNAVLRY----GISHPVVNDGDMNLWRELGVN-----SWPTFAVVGPNGKLLAQLAGEG- 556 (1089)
Q Consensus 487 v~vi~v~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~G~~- 556 (1089)
+.+|+|++ ++.+.+++|++++ +++|+++.|.+.++++.|++. .+|++||||++|+|++++.|..
T Consensus 80 v~vv~Vs~------d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~ 153 (195)
T 2bmx_A 80 AQILGVSI------DSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGS 153 (195)
T ss_dssp EEEEEEES------SCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTT
T ss_pred CEEEEEEC------CCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCC
Confidence 99999986 3467889999998 899999999999999999999 9999999999999999988765
Q ss_pred ---chhhHHHHHHHHH
Q 001380 557 ---HRKDLDDLVEAAL 569 (1089)
Q Consensus 557 ---~~~~l~~~l~~~l 569 (1089)
+.+++.+.|+.++
T Consensus 154 ~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 154 VGRNVDEVLRVLDALQ 169 (195)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHh
Confidence 4566666666554
No 145
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.82 E-value=2.4e-20 Score=196.35 Aligned_cols=141 Identities=14% Similarity=0.108 Sum_probs=119.9
Q ss_pred cCCCCCCCCCCccccC-CCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh
Q 001380 423 NRKTTPIVPEFPAKLD-WLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~-~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~ 500 (1089)
...+|+++|+|++... +.+|+++++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.||+|++
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l-~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~------ 90 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKL-TDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSV------ 90 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEES------
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEH-HHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC------
Confidence 4578999999996532 224689999 8999999999999 999999999999999999999988999999986
Q ss_pred hcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCC----chhhHHH
Q 001380 501 KDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEG----HRKDLDD 563 (1089)
Q Consensus 501 ~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~----~~~~l~~ 563 (1089)
++.+.+++|++++ +++||++.|.+.++++.||+. .+|++||||++|+|++.+.|.. +.+++.+
T Consensus 91 D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~ 170 (211)
T 2pn8_A 91 DSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLR 170 (211)
T ss_dssp SCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHH
T ss_pred CCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHH
Confidence 4567788899888 789999999999999999995 6999999999999999987643 4456666
Q ss_pred HHHHHHH
Q 001380 564 LVEAALL 570 (1089)
Q Consensus 564 ~l~~~l~ 570 (1089)
.|+.+..
T Consensus 171 ~l~~l~~ 177 (211)
T 2pn8_A 171 LVQAFQY 177 (211)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 6666543
No 146
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.82 E-value=2.4e-20 Score=187.52 Aligned_cols=137 Identities=12% Similarity=0.169 Sum_probs=119.2
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCC--EEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGK--VVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk--~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
...+|+.+|+|++. +.+|+++++ ++++|| ++||+|| ++||++|+.++|.|++++++|++++ .||+|++
T Consensus 6 ~~~~G~~~P~f~l~--~~~G~~v~l-~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~----- 76 (159)
T 2a4v_A 6 ELEIGDPIPDLSLL--NEDNDSISL-KKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSA----- 76 (159)
T ss_dssp CCCTTCBCCSCEEE--CTTSCEEEH-HHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEES-----
T ss_pred cCCCCCCCCCeEEE--CCCCCEEeH-HHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeC-----
Confidence 46789999999964 569999999 899887 8999997 9999999999999999999999888 9999986
Q ss_pred hhcHHHHHHHHHHcCCccceeecCChhHHHHhCCCcee------EEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 500 EKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWP------TFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~P------t~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
++.+.+++|+++++++||++.|.+.++++.||+...| ++||| ++|+|++.+.|.......++.++++.+
T Consensus 77 -d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~ 151 (159)
T 2a4v_A 77 -DSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLE 151 (159)
T ss_dssp -CCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEccCCccccHHHHHHHHHH
Confidence 3677889999999999999999999999999999988 99999 999999999887655444444444433
No 147
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.82 E-value=1.2e-20 Score=190.98 Aligned_cols=138 Identities=20% Similarity=0.341 Sum_probs=121.6
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCC-------
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK------- 496 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~------- 496 (1089)
..+|+++|+|++. +++|+.+++ ++++||++||+||++||++|+.++|.|.+++++|+ ++.+|+|+++.
T Consensus 11 ~~~g~~~p~~~l~--~~~g~~~~l-~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~ 85 (165)
T 3ha9_A 11 EEVLEREASFSLT--TIDGEVISL-NNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKAL 85 (165)
T ss_dssp HHHHHHHHCCCEE--BTTSCEECG-GGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHH
T ss_pred ccccCcCCCCEee--cCCCCEeeH-HHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccccc
Confidence 3468899999964 569999999 89999999999999999999999999999999998 79999998731
Q ss_pred ------CCChhcHHHHHHHHHHcCC-ccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCC-chhhHHHHHHHH
Q 001380 497 ------FDNEKDLEAIRNAVLRYGI-SHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG-HRKDLDDLVEAA 568 (1089)
Q Consensus 497 ------~~~~~~~~~~~~~~~~~~~-~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~-~~~~l~~~l~~~ 568 (1089)
....++.+.++++++++++ +|+++.| +.++++.|+|.++|+++|||++|+++. .|.. +.+.+.+.|+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 86 GLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSV 162 (165)
T ss_dssp TCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC
T ss_pred ccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHH
Confidence 1122689999999999999 9999999 899999999999999999999999998 6777 788888888765
Q ss_pred H
Q 001380 569 L 569 (1089)
Q Consensus 569 l 569 (1089)
+
T Consensus 163 ~ 163 (165)
T 3ha9_A 163 Q 163 (165)
T ss_dssp -
T ss_pred h
Confidence 5
No 148
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=99.82 E-value=2.2e-19 Score=195.32 Aligned_cols=129 Identities=25% Similarity=0.358 Sum_probs=115.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIV 244 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~ 244 (1089)
.++||+.++|+.|+ |++++|+||.....++..++.+|+. .+|+.++++++....||++.+|+.+++++|++|++|+|
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 169 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT-DSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch-hhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 68999999999999 8999999999999999999999996 99999999999999999999999999999999999999
Q ss_pred EcCChhhHHHHHHcCCeEEEEcC-----------------------CCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 245 IEDALAGVQAAKAAQMRCIAVTT-----------------------TLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 245 VGD~~~Di~aA~~aG~~~i~V~~-----------------------g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
|||+.+|+++|+++|+.++++++ +....+.....|++++.++.++ .++|...
T Consensus 170 vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el--~~~l~~~ 244 (253)
T 1qq5_A 170 VSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL--PRLVRGM 244 (253)
T ss_dssp EESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGH--HHHHHHH
T ss_pred EeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHH--HHHHHHh
Confidence 99999999999999999999988 3222223346799999999998 6666544
No 149
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=99.82 E-value=8.5e-20 Score=188.83 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=141.2
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcC-CCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMG-TGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+++...+..++.++++++|+..+.+.+....+ .....+. ...... ......+.+.+.+
T Consensus 5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~ 76 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIE----TFAPNL----ENFLEKYKENEAR 76 (190)
T ss_dssp CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHH----HHCTTC----TTHHHHHHHHHHH
T ss_pred cccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccHHHHH----HHhhhH----HHHHHHHHHHHHH
Confidence 479999999999999998899999999999999877666554432 2222222 111111 1123334444444
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcC
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILN 236 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lg 236 (1089)
.+... .++||+.++|+.|+++|++++++||.. ..++..++.+++. .+|+.++++++....||++++|+.+++++|
T Consensus 77 ~~~~~---~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 151 (190)
T 2fi1_A 77 ELEHP---ILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIA-AYFTEVVTSSSGFKRKPNPESMLYLREKYQ 151 (190)
T ss_dssp HTTSC---CBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCG-GGEEEEECGGGCCCCTTSCHHHHHHHHHTT
T ss_pred hcCcC---ccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCH-hheeeeeeccccCCCCCCHHHHHHHHHHcC
Confidence 33322 489999999999999999999999975 4688899999996 999999999999999999999999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC
Q 001380 237 VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 237 v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~ 269 (1089)
++ +|++|||+.+|+++|+.+|+.++++.++.
T Consensus 152 ~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 152 IS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp CS--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred CC--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence 98 99999999999999999999999998754
No 150
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.82 E-value=1.1e-20 Score=188.74 Aligned_cols=138 Identities=20% Similarity=0.249 Sum_probs=125.0
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
...+|+++|+|++. +.+|+.+++ ++++ |++||+||++||++|+.++|.|++++++| ++.+++|++ +.+++
T Consensus 4 ~l~~g~~~p~f~l~--~~~g~~~~l-~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~---d~~~~ 73 (154)
T 3ia1_A 4 AVKPGEPLPDFLLL--DPKGQPVTP-ATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISR---EPRDT 73 (154)
T ss_dssp CCCSBEECCCCCEE--CTTSCEECT-TTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEEC---CTTCC
T ss_pred cCCCCCcCCceEEE--CCCCCEech-HHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeC---CCccc
Confidence 46789999999964 569999999 8899 99999999999999999999999999999 688899987 35678
Q ss_pred HHHHHHHHHHcCCccceeec---CChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 503 LEAIRNAVLRYGISHPVVND---GDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d---~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
.+.+++++++++++|+++.| ....+++.|++.++|+++|||++|+++.++.|..+.+++.+.|++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 144 (154)
T 3ia1_A 74 REVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGA 144 (154)
T ss_dssp HHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccC
Confidence 99999999999999999998 778999999999999999999999999999999888888888876543
No 151
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=99.82 E-value=3.3e-20 Score=193.78 Aligned_cols=185 Identities=21% Similarity=0.298 Sum_probs=138.9
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHH-hHhhhc-------CCCHHHHHHHHHhhcCCCCCCHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVE-DFLPFM-------GTGEANFLGGVASVKGVKGFDSEAAKKR 149 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (1089)
++|+|+||+||||+++.. ...++.++++++|+..... .+.... ......+...+....+. ..... .
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~ 76 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPR-DFTPE----D 76 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCC-SSCHH----H
T ss_pred CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCC-CCCHH----H
Confidence 479999999999999874 3567888888888764322 111110 12223333332221111 11111 2
Q ss_pred HHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHH
Q 001380 150 FFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFL 229 (1089)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~ 229 (1089)
+.+.+.. . ..++||+.++|+.|+++| +++|+||.....++..++.+|+. .+|+.++++++....||++++|.
T Consensus 77 ~~~~~~~----~--~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~-~~f~~~~~~~~~~~~Kp~~~~~~ 148 (200)
T 3cnh_A 77 FRAVMEE----Q--SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG-EFLLAFFTSSALGVMKPNPAMYR 148 (200)
T ss_dssp HHHHHHH----T--CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG-GTCSCEEEHHHHSCCTTCHHHHH
T ss_pred HHHHHHh----c--CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH-HhcceEEeecccCCCCCCHHHHH
Confidence 2222211 1 258999999999999999 99999999999999999999996 99999999999999999999999
Q ss_pred HHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhh
Q 001380 230 SASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKE 276 (1089)
Q Consensus 230 ~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~ 276 (1089)
++++++|+++++|+||||+.+|+++|+++|+.+++|.++. ..+++.+
T Consensus 149 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~ 196 (200)
T 3cnh_A 149 LGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAA 196 (200)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHHH
T ss_pred HHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHHH
Confidence 9999999999999999999999999999999999998875 3444443
No 152
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.82 E-value=4e-20 Score=187.74 Aligned_cols=144 Identities=22% Similarity=0.250 Sum_probs=125.1
Q ss_pred hhccCCCCCCCCCCccccCCCCCceeecccc-cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC
Q 001380 420 DVENRKTTPIVPEFPAKLDWLNTAPLQFRRD-LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498 (1089)
Q Consensus 420 ~~~~~~~g~~~P~f~~~~~~~~g~~~~l~~~-~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~ 498 (1089)
......+|+++|+|++...+.+|+.+++ ++ .+||++||+||++||++|+.++|.|++++++ ++.+++|++
T Consensus 18 ~~~~~~~G~~~P~f~l~~~~~~g~~~~~-~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~---- 88 (168)
T 2b1k_A 18 NLESALIGKPVPKFRLESLDNPGQFYQA-DVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNY---- 88 (168)
T ss_dssp -CCCTTTTSBCCCCEEEESSSTTCEEEG-GGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEE----
T ss_pred cccccccCCcCCCeEeecccCCCcEeeh-hHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEEC----
Confidence 3446679999999996533228889988 66 4999999999999999999999999999886 688899965
Q ss_pred ChhcHHHHHHHHHHcCCccc-eeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 499 NEKDLEAIRNAVLRYGISHP-VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~-v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
+++.+.+++++++++++|+ ++.|.+.++++.|+|.++|++|+||++|++++++.|..+.+.+.+.|+.+++...
T Consensus 89 -~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 163 (168)
T 2b1k_A 89 -KDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYS 163 (168)
T ss_dssp -SCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHHHHH
T ss_pred -CCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 4577889999999999998 5788899999999999999999999999999999999999999999988887654
No 153
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.82 E-value=5.4e-20 Score=185.78 Aligned_cols=122 Identities=12% Similarity=0.000 Sum_probs=110.1
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEec-CCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWT-YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
...+|+++|+|++. +.+|+++++ ++++||++||+||+ +||++|+.++|.|++++++| .++.+|+|+. +
T Consensus 15 ~~~~G~~~P~f~l~--~~~G~~v~l-~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~------d 83 (163)
T 1psq_A 15 QLQVGDKALDFSLT--TTDLSKKSL-ADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSM------D 83 (163)
T ss_dssp CCCTTSBCCCCEEE--CTTSCEEEG-GGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEES------S
T ss_pred CCCCCCCCCCEEEE--cCCCcEeeH-HHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEEC------C
Confidence 35689999999965 569999999 89999999999995 99999999999999999999 6799999986 4
Q ss_pred cHHHHHHHHHHcCC-ccceeec-CChhHHHHhCCC----c--eeEEEEECCCCcEEEEecCC
Q 001380 502 DLEAIRNAVLRYGI-SHPVVND-GDMNLWRELGVN----S--WPTFAVVGPNGKLLAQLAGE 555 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~-~~~v~~d-~~~~l~~~~~v~----~--~Pt~~lid~~G~i~~~~~G~ 555 (1089)
+.+.+++|++++++ +||++.| .+.++++.|++. + .|++||||++|+|++.+.|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~ 145 (163)
T 1psq_A 84 LPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVD 145 (163)
T ss_dssp CHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECS
T ss_pred CHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecC
Confidence 57788999999999 9999999 889999999997 3 49999999999999998775
No 154
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.82 E-value=1.4e-20 Score=189.89 Aligned_cols=125 Identities=15% Similarity=0.091 Sum_probs=113.1
Q ss_pred cCCCCCCCCCCccccCCCCC--ceeecccc-cCCCEEEEEEe-cCCCcchh-hhhhhHHHHHHHcCCCCEE-EEEEeCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNT--APLQFRRD-LKGKVVVLDFW-TYCCINCM-HVLPDLEFLEKKYKDMPFT-VVGVHSAK 496 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g--~~~~l~~~-~~gk~vll~Fw-a~wC~~C~-~~~p~l~~l~~~~~~~~v~-vi~v~~~~ 496 (1089)
...+|+++|+|++.+.+.+| +++++ ++ ++||++||+|| ++||++|+ .++|.|++++++|+++++. ||+|+.
T Consensus 3 ~~~~G~~aP~f~l~~~~~~G~~~~~~l-~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~-- 79 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAYFDEQDQLQEVSV-HSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISV-- 79 (162)
T ss_dssp CCCTTCBCCCCEEEEECTTSCEEEEES-HHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEES--
T ss_pred cCCCCCCCCCeEEEeecCCCCceeEeH-HHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC--
Confidence 35689999999975446689 99999 88 89999999999 89999999 9999999999999888899 999986
Q ss_pred CCChhcHHHHHHHHHHcCC--ccceeecCChhHHHHhCCC-----------ceeEEEEECCCCcEEEEecCC
Q 001380 497 FDNEKDLEAIRNAVLRYGI--SHPVVNDGDMNLWRELGVN-----------SWPTFAVVGPNGKLLAQLAGE 555 (1089)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~--~~~v~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~G~ 555 (1089)
++++.+++|++++++ +||++.|.+++++++||+. ..|++|||| +|+|++.+.|.
T Consensus 80 ----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 80 ----NDPFVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp ----SCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred ----CCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 467889999999999 8999999999999999997 379999999 99999998876
No 155
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=99.82 E-value=2.2e-20 Score=193.61 Aligned_cols=131 Identities=21% Similarity=0.275 Sum_probs=118.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCCh---HhHHHHHHHCCCCCCCccEEEEcCCc----cCCCCCHHHHHHHHHHcCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADR---IKVDANLAAAGLPVSMFDAIVSADAF----ENLKPAPDIFLSASKILNV 237 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~---~~~~~~l~~~gl~~~~fd~i~~~~~~----~~~KP~~~~~~~~l~~lgv 237 (1089)
.++||+.++|+.|+++|++++|+||+.. ..++..++.+|+. .+|+.++++++. +..||+|++|+.+++++|+
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~ 112 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII-DYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQI 112 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG-GGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTC
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch-hheEEEEEccccccccCCCCcCHHHHHHHHHHcCC
Confidence 7899999999999999999999999876 8999999999996 999999999886 7889999999999999999
Q ss_pred CCCcEEEEcCC-hhhHHHHHHcCCeEEEEcCCCC---HHHHhhcCCcEEec--CcccCCHHHHHhcc
Q 001380 238 PTSECIVIEDA-LAGVQAAKAAQMRCIAVTTTLS---EERLKEASPSLIRK--EIGSVSLNDILTGG 298 (1089)
Q Consensus 238 ~p~~~v~VGD~-~~Di~aA~~aG~~~i~V~~g~~---~~~l~~~~~d~vi~--dl~el~i~~ll~~~ 298 (1089)
+|++|+||||+ .+|+.+|+++||++++|.++.. .+.+....|+++++ ++.+| ..+|.+.
T Consensus 113 ~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l--~~~l~l~ 177 (189)
T 3ib6_A 113 DKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV--PEALLLL 177 (189)
T ss_dssp CGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH--HHHHHHH
T ss_pred CcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhH--HHHHHHH
Confidence 99999999999 5999999999999999998752 34455558999999 99988 6776654
No 156
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.82 E-value=1.1e-19 Score=225.67 Aligned_cols=233 Identities=17% Similarity=0.173 Sum_probs=178.2
Q ss_pred CCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCC--
Q 001380 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVND-- 689 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g-- 689 (1089)
...|++++. +.|.+++.++.....+.. .+..|.||++++.++.|||+|..+++|+++++++.
T Consensus 377 ~~~ll~~~~--~~I~~id~~~~~~~~~~~--------------~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~ 440 (699)
T 1n7d_A 377 IAYLFFTNR--HEVRKMTLDRSEYTSLIP--------------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 440 (699)
T ss_dssp CCCBCCCCT--TC-CEECTTSCCEECCSC--------------CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC
T ss_pred ceeEEecCc--cceEEEeCCCCcceeeec--------------cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCC
Confidence 345666654 688899888654433221 14589999999988889999999999999998752
Q ss_pred --eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCC
Q 001380 690 --TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSS 767 (1089)
Q Consensus 690 --~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~ 767 (1089)
...++. ...+..|.+|++++.++.|||++.++++|+++++.+...+.+..
T Consensus 441 ~~~~~~~i----------------~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~------------ 492 (699)
T 1n7d_A 441 VSSYDTVI----------------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR------------ 492 (699)
T ss_dssp -CCCCCBC----------------CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC------------
T ss_pred CcceEEEE----------------eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe------------
Confidence 111111 12256899999998788999999999999999998877666642
Q ss_pred CCccccCCceEEEcCCCCEEEEEeCCC-CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc
Q 001380 768 LNTSFAQPSGISLSPDFMEIYVADSES-SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK 846 (1089)
Q Consensus 768 ~~~~~~~P~glav~~~g~~lyvad~~~-~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~ 846 (1089)
..+..|.||++++++++|||+|.+. ++|+++++++...+++.. ..+..|.||++|+
T Consensus 493 --~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~---------------------~~l~~PnGlavd~ 549 (699)
T 1n7d_A 493 --EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---------------------ENIQWPNGITLDL 549 (699)
T ss_dssp --CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC---------------------SSCSSCCCEEECT
T ss_pred --CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe---------------------CCCCCccEEEEec
Confidence 2356799999999877999999876 899999987654443321 1267899999997
Q ss_pred C-CcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCC
Q 001380 847 N-GQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 847 ~-G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
+ ++|||+|+.+++|.+++.++....++.... ..+..|.||+++.+ +|||+|+.+++|.++++.++
T Consensus 550 ~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~-----------~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 550 LSGRLYWVDSKLHSISSIDVNGGNRKTILEDE-----------KRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp TTCCEEEEETTTTEEEEECSSSSCCEEECCCS-----------SSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE
T ss_pred cCCEEEEEecCCCeEEEEccCCCceEEEEecC-----------CcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC
Confidence 5 689999999999999999877666665321 25788999999864 89999999999999998654
No 157
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.82 E-value=1.4e-20 Score=190.04 Aligned_cols=134 Identities=19% Similarity=0.288 Sum_probs=122.3
Q ss_pred cCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCc
Q 001380 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIS 516 (1089)
Q Consensus 437 ~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1089)
+.+++|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+|+|+++....+++.+.+++++++++++
T Consensus 23 l~~~~g~~~~~-~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 23 MKTADNRPASV-YLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp CEETTSSBGGG-GCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred cCCCCCCEeeH-HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 44669999999 88999999999999999999999999999999998888999999987666677888999999999998
Q ss_pred -cceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 517 -HPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 517 -~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+++..|.+.++++.|+|.++|+++|||++|+++.++.|..+.+.+.++|+.+++.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred cceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999998888888888876653
No 158
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.82 E-value=1.3e-17 Score=184.74 Aligned_cols=241 Identities=15% Similarity=0.162 Sum_probs=187.1
Q ss_pred CCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCC
Q 001380 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~ 679 (1089)
...|.++++++ +|++|+++...++|.+++.+|+.. .+... . ....|.+|+++++|+ +|+++..++
T Consensus 56 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~-~-----------~~~~~~~i~~~~~g~-l~v~~~~~~ 120 (299)
T 2z2n_A 56 DAKVMCLTISS-DGEVWFTENAANKIGRITKKGIIK-EYTLP-N-----------PDSAPYGITEGPNGD-IWFTEMNGN 120 (299)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEE-EEECS-S-----------TTCCEEEEEECTTSC-EEEEETTTT
T ss_pred cCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcEE-EEeCC-C-----------cCCCceeeEECCCCC-EEEEecCCc
Confidence 36799999997 889999999889999999987754 33321 1 135799999999888 999999899
Q ss_pred EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCcc
Q 001380 680 ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759 (1089)
Q Consensus 680 ~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~ 759 (1089)
.|.++++ ++.+..+.... ....|.+++++++| .+|+++..++.|+++++ ++.+..+...
T Consensus 121 ~i~~~d~-~g~~~~~~~~~---------------~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~--- 179 (299)
T 2z2n_A 121 RIGRITD-DGKIREYELPN---------------KGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEFKIP--- 179 (299)
T ss_dssp EEEEECT-TCCEEEEECSS---------------TTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECS---
T ss_pred eEEEECC-CCCEEEecCCC---------------CCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEeeCC---
Confidence 9999998 66665554211 13479999999987 89999998999999999 6766655321
Q ss_pred ccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCc
Q 001380 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839 (1089)
Q Consensus 760 ~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P 839 (1089)
.....|.+|+++++| .||+++...+.|.++++ ++....+... .....|
T Consensus 180 ----------~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~--------------------~~~~~~ 227 (299)
T 2z2n_A 180 ----------TPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEITEFKIP--------------------TPNARP 227 (299)
T ss_dssp ----------STTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECS--------------------STTCCE
T ss_pred ----------CCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcEEEEECC--------------------CCCCCc
Confidence 224568999999998 79999999999999998 5555433110 114579
Q ss_pred eEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEe
Q 001380 840 LGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919 (1089)
Q Consensus 840 ~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~ 919 (1089)
.+++++++|++||++..++.|.++|++ +.+..+...+ ....|.++++ ++|+|||++. ++.|.+++
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~------------~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~ 292 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQI------------KSAEPHGICF-DGETIWFAME-CDKIGKLT 292 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSS------------SSCCEEEEEE-CSSCEEEEET-TTEEEEEE
T ss_pred eeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCC------------CCCccceEEe-cCCCEEEEec-CCcEEEEE
Confidence 999999999999999999999999994 6666653211 2456999999 8999999987 68999998
Q ss_pred CCCC
Q 001380 920 LNKE 923 (1089)
Q Consensus 920 ~~~~ 923 (1089)
+.+.
T Consensus 293 ~~~~ 296 (299)
T 2z2n_A 293 LIKD 296 (299)
T ss_dssp EC--
T ss_pred cCcc
Confidence 8765
No 159
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=99.82 E-value=4.9e-21 Score=203.68 Aligned_cols=196 Identities=21% Similarity=0.234 Sum_probs=137.2
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhh----cCCCH--HHH------HHHHHhhcCCCCCCHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPF----MGTGE--ANF------LGGVASVKGVKGFDSEA 145 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~----~~~~~--~~~------~~~~~~~~~~~~~~~~~ 145 (1089)
++++|+||+||||+|+...+..++.++++++|+..+.+++... .+... ... ...+....+... .++
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~ 79 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP--SER 79 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC--CHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC--cHH
Confidence 4789999999999999988889999999999998776554321 12110 000 223333334332 223
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCH
Q 001380 146 AKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAP 225 (1089)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~ 225 (1089)
...++.+ .+.......++||+.++|+.|+++|++++|+||... .++..++++|+. .+||.++++++++..||+|
T Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~ 153 (220)
T 2zg6_A 80 LVKELKE----ADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK-KYFDALALSYEIKAVKPNP 153 (220)
T ss_dssp HHHHHHH----TTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG-GGCSEEC-----------C
T ss_pred HHHHHHH----HhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH-hHeeEEEeccccCCCCCCH
Confidence 3333333 222222346899999999999999999999999876 578899999996 9999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChh-hHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 226 DIFLSASKILNVPTSECIVIEDALA-GVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 226 ~~~~~~l~~lgv~p~~~v~VGD~~~-Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
++|..+++++|++| +||||+.+ |+.+|+++||.+++|.++....++ ++++.++.++
T Consensus 154 ~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~-----~~~i~~l~el 210 (220)
T 2zg6_A 154 KIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV-----RDRVKNLREA 210 (220)
T ss_dssp CHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC-----CSCBSSHHHH
T ss_pred HHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc-----ceEECCHHHH
Confidence 99999999999987 99999997 999999999999999875322111 4567777766
No 160
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=2.2e-18 Score=196.36 Aligned_cols=270 Identities=17% Similarity=0.164 Sum_probs=186.8
Q ss_pred CCCceEEEeecCCeEEEEeCC--C--CEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC
Q 001380 601 KFPGKLAIDILNNRLFISDSN--H--NRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT 676 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~--~--~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~ 676 (1089)
..|.+|++++ +|++||+... . .+|.+++ +|+.. .+... .. + ....+..|+||++|++|+ |||+|.
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~-~~---~---~~~~~~~p~gv~~d~~g~-L~v~D~ 85 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQ-SG---N---AIITFDTVLGIKSDGNGI-VWMLDN 85 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCC-CS---S---CCCCCSCEEEEEECSSSE-EEEEEC
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCCee-cCCCc-cc---C---cccceeEeeEEEEcCCCc-EEEEcC
Confidence 5899999997 8899999642 2 3899998 77543 33321 10 1 124578999999999987 999998
Q ss_pred C-----CCEEEEEECCCCe-EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC---CCcEEEEEECCC
Q 001380 677 E-----NHALREIDFVNDT-VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA---GQHQIWEHSTVD 747 (1089)
Q Consensus 677 ~-----n~~I~~~d~~~g~-v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~---~~~~I~~~~~~~ 747 (1089)
+ .++|.++|++++. +.++.-..... ...+.|.+|+++++++.+||++. +.+.|+++|+.+
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~-----------~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT-----------LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTS-----------CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhc-----------ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 7 5899999999887 44443211100 11347899999987779999999 889999999988
Q ss_pred CeEEEEeCC--Cccc-----cCCCCCC----CC----ccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCC---CCeEE
Q 001380 748 GVTRAFSGD--GYER-----NLNGSSS----LN----TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT---GGSRL 809 (1089)
Q Consensus 748 g~~~~~~g~--g~~~-----~~~g~~~----~~----~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~---~~~~~ 809 (1089)
+....+... .... ..+|..- .. .+...|+||+++++|+.||+++..+++|++++... +..
T Consensus 155 g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~-- 232 (343)
T 2qe8_A 155 GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL-- 232 (343)
T ss_dssp CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC--
T ss_pred CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC--
Confidence 877665422 1000 0011000 00 01235899999999999999999989999998531 100
Q ss_pred EecCCCCCCCCcc-ccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccc
Q 001380 810 LAGGDPIFPDNLF-KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALA 888 (1089)
Q Consensus 810 ~~g~~~~~~~~l~-~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~ 888 (1089)
..+ .++ .+. .......|.|+++|++|++||++..+++|.++|++++.+.++...
T Consensus 233 -~~~------~~~~~~~------~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~------------ 287 (343)
T 2qe8_A 233 -TDA------ELGSKIE------RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD------------ 287 (343)
T ss_dssp -CHH------HHHTTCE------EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC------------
T ss_pred -Chh------hhhcceE------ecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC------------
Confidence 000 000 000 000123699999999999999999999999999955667666531
Q ss_pred cccCCCceEEEccCCcEEEEECCCCEEEEEe
Q 001380 889 AQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919 (1089)
Q Consensus 889 ~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~ 919 (1089)
..+..|.+++++++|+|||++...+++..|.
T Consensus 288 ~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 288 EKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp GGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CceecCCeeEECCCCcEEEEeCccccccccc
Confidence 1467899999999999999998777765544
No 161
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.81 E-value=3.6e-20 Score=187.46 Aligned_cols=133 Identities=17% Similarity=0.124 Sum_probs=114.6
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
...+|+++|+|++. +.+|+++++ ++++||++||+|| ++||++|+.++|.|++++++| .++.+|+|+. +
T Consensus 16 ~~~~G~~~P~f~l~--~~~G~~v~l-~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~------d 84 (165)
T 1q98_A 16 FPQVGEIVENFILV--GNDLADVAL-NDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISA------D 84 (165)
T ss_dssp CCCTTCBCCCCEEE--CTTSCEEEG-GGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEES------S
T ss_pred cCCCCCCCCCeEEE--CCCCCEEeh-HHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeC------C
Confidence 35689999999964 569999999 8999999999999 899999999999999999999 6799999985 4
Q ss_pred cHHHHHHHHHHcCC-ccceeecC-ChhHHHHhCCCc---------eeEEEEECCCCcEEEEecCC--CchhhHHHHHH
Q 001380 502 DLEAIRNAVLRYGI-SHPVVNDG-DMNLWRELGVNS---------WPTFAVVGPNGKLLAQLAGE--GHRKDLDDLVE 566 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~-~~~v~~d~-~~~l~~~~~v~~---------~Pt~~lid~~G~i~~~~~G~--~~~~~l~~~l~ 566 (1089)
+.+.+++|++++++ +|+++.|. +.++++.|++.. .|++||||++|+|++.+.|. .....++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~ 162 (165)
T 1q98_A 85 LPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALA 162 (165)
T ss_dssp CHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHH
T ss_pred CHHHHHHHHHHcCCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHH
Confidence 67788999999999 79999998 899999999964 59999999999999998763 23344554443
No 162
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.81 E-value=4.3e-20 Score=192.98 Aligned_cols=137 Identities=19% Similarity=0.241 Sum_probs=121.7
Q ss_pred CCCCCCCCCccccCCC--CCc---eeeccccc-CCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCC
Q 001380 425 KTTPIVPEFPAKLDWL--NTA---PLQFRRDL-KGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKF 497 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~--~g~---~~~l~~~~-~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~ 497 (1089)
.+|+++|+|++. +. +|+ ++++ +++ +||++||+|| ++||++|+.++|.|++++++|++.++.+|+|++
T Consensus 2 ~~G~~~P~f~l~--~~~~~G~~~~~v~l-~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~--- 75 (198)
T 1zof_A 2 VVTKLAPDFKAP--AVLGNNEVDEHFEL-SKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSI--- 75 (198)
T ss_dssp CTTSBCCCCEEE--EECTTSCEEEEEET-TTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEES---
T ss_pred CCCCcCCceEee--cccCCCcccceEEH-HHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEEC---
Confidence 579999999964 45 788 9999 888 9999999999 999999999999999999999888899999986
Q ss_pred CChhcHHHHHHHHHH-------cCCccceeecCChhHHHHhCCC-----ceeEEEEECCCCcEEEEecCCC----chhhH
Q 001380 498 DNEKDLEAIRNAVLR-------YGISHPVVNDGDMNLWRELGVN-----SWPTFAVVGPNGKLLAQLAGEG----HRKDL 561 (1089)
Q Consensus 498 ~~~~~~~~~~~~~~~-------~~~~~~v~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~G~~----~~~~l 561 (1089)
++.+.+++|+++ ++++|+++.|.+.++++.|++. ++|++||||++|+|++++.|.. +.+++
T Consensus 76 ---d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l 152 (198)
T 1zof_A 76 ---DSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEM 152 (198)
T ss_dssp ---SCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHH
T ss_pred ---CCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHH
Confidence 346788889988 8999999999999999999999 9999999999999999988765 56777
Q ss_pred HHHHHHHHH
Q 001380 562 DDLVEAALL 570 (1089)
Q Consensus 562 ~~~l~~~l~ 570 (1089)
.+.|+.+..
T Consensus 153 ~~~l~~l~~ 161 (198)
T 1zof_A 153 LRMVDALLH 161 (198)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 163
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.81 E-value=6.9e-20 Score=183.30 Aligned_cols=139 Identities=24% Similarity=0.331 Sum_probs=121.7
Q ss_pred cCCCCCCCCCCccccCCCCC--------ceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeC
Q 001380 423 NRKTTPIVPEFPAKLDWLNT--------APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHS 494 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g--------~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~ 494 (1089)
...+|+++|+|++. +++| +.+++ ++++||++||+||++||++|+.++|.|++++++ .++.+++|++
T Consensus 7 ~~~~g~~~p~f~l~--~~~g~~~~~~~~~~~~l-~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~ 80 (156)
T 1kng_A 7 SALIGRPAPQTALP--PLEGLQADNVQVPGLDP-AAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINY 80 (156)
T ss_dssp -----CBCCCCCBC--CCTTCEETTEECCCBCG-GGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEE
T ss_pred hHHhCCCCCCceee--eccCcccccccCceech-HHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEEC
Confidence 45789999999964 5588 89999 899999999999999999999999999999876 3589999975
Q ss_pred CCCCChhcHHHHHHHHHHcCCccc-eeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHh
Q 001380 495 AKFDNEKDLEAIRNAVLRYGISHP-VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~-v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
+++.+.+++++++++++|+ +..|.+.++++.|++.++|++++||++|+++.++.|..+.+.+.+.|+.+++..
T Consensus 81 -----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 154 (156)
T 1kng_A 81 -----KDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKA 154 (156)
T ss_dssp -----SCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 4678899999999999998 888999999999999999999999999999999999999999999999888764
No 164
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.81 E-value=9.1e-20 Score=191.08 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=122.3
Q ss_pred cCCCCCCCCCCccccCCCCC--ceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNT--APLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g--~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
...+|+++|+|++.....+| +++++ ++++||++||+|| ++||++|+.++|.|++++++|++.++.+|+|++
T Consensus 5 ~~~~G~~aP~f~l~~~~~~g~~~~v~l-~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~----- 78 (202)
T 1uul_A 5 EAEDLHPAPDFNETALMPNGTFKKVAL-TSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSM----- 78 (202)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEG-GGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEES-----
T ss_pred cccCCCcCCCcEeeeeecCCCccEEEH-HHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC-----
Confidence 45789999999975321167 89999 9999999999999 999999999999999999999988999999986
Q ss_pred hhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCCc----hhhHH
Q 001380 500 EKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEGH----RKDLD 562 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~~----~~~l~ 562 (1089)
++.+.+++|++++ +++||++.|.+.++++.|++. ++|++||||++|+|++++.|... .+++.
T Consensus 79 -D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell 157 (202)
T 1uul_A 79 -DSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEAL 157 (202)
T ss_dssp -SCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHH
T ss_pred -CCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHH
Confidence 3567788999988 889999999999999999999 99999999999999999877543 46777
Q ss_pred HHHHHHHH
Q 001380 563 DLVEAALL 570 (1089)
Q Consensus 563 ~~l~~~l~ 570 (1089)
+.|+.+..
T Consensus 158 ~~l~~l~~ 165 (202)
T 1uul_A 158 RLVKAFQF 165 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 77776654
No 165
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.81 E-value=4.8e-20 Score=194.38 Aligned_cols=139 Identities=14% Similarity=0.176 Sum_probs=122.1
Q ss_pred cCCCCCCCCCCccccCCC--CC--ceeeccccc-CCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCC
Q 001380 423 NRKTTPIVPEFPAKLDWL--NT--APLQFRRDL-KGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAK 496 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~--~g--~~~~l~~~~-~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~ 496 (1089)
...+|+++|+|++. +. +| +++++ +++ +||++||+|| ++||++|+.++|.|++++++|++.++.||+|++
T Consensus 20 ~l~~G~~aP~f~l~--~~~~~G~~~~v~l-~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~-- 94 (213)
T 2i81_A 20 PTYVGKEAPFFKAE--AVFGDNSFGEVNL-TQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSV-- 94 (213)
T ss_dssp CCCBTSBCCCCEEE--EECTTSCEEEEEG-GGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEES--
T ss_pred cccCCCcCCCeEee--ccccCCceeEEeH-HHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC--
Confidence 45789999999964 44 78 89999 899 9999999999 999999999999999999999888899999986
Q ss_pred CCChhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC-----ceeEEEEECCCCcEEEEecCCC----chhh
Q 001380 497 FDNEKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN-----SWPTFAVVGPNGKLLAQLAGEG----HRKD 560 (1089)
Q Consensus 497 ~~~~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~G~~----~~~~ 560 (1089)
++.+.+++|++++ +++||++.|.+.++++.|++. .+|++||||++|+|++++.|.. +.++
T Consensus 95 ----D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~e 170 (213)
T 2i81_A 95 ----DSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDE 170 (213)
T ss_dssp ----SCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHH
T ss_pred ----CCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHH
Confidence 3567888899888 889999999999999999999 9999999999999999987653 3667
Q ss_pred HHHHHHHHHH
Q 001380 561 LDDLVEAALL 570 (1089)
Q Consensus 561 l~~~l~~~l~ 570 (1089)
+.+.|+.+..
T Consensus 171 ll~~l~~l~~ 180 (213)
T 2i81_A 171 ILRIIDAIQH 180 (213)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777776553
No 166
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.81 E-value=5.7e-20 Score=197.16 Aligned_cols=139 Identities=14% Similarity=0.177 Sum_probs=117.1
Q ss_pred ccCCCCCCCCCCcccc-CCCCCceeecccccCCCEEEEEEec-CCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 422 ENRKTTPIVPEFPAKL-DWLNTAPLQFRRDLKGKVVVLDFWT-YCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 422 ~~~~~g~~~P~f~~~~-~~~~g~~~~l~~~~~gk~vll~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
....+|+++|+|+++. .+.+|++++| ++++||++||+||+ +||++|+.++|.|++++++|++.++.||+|++
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~vsL-sd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~----- 119 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKELKL-SDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSV----- 119 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEEEEG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEES-----
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcEEEH-HHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEEC-----
Confidence 3567999999999652 2335679999 99999999999998 99999999999999999999988999999986
Q ss_pred hhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCCc----hhhHH
Q 001380 500 EKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEGH----RKDLD 562 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~~----~~~l~ 562 (1089)
++.+..++|++++ +++||++.|.+.++++.||+. .+|++||||++|+|++.+.+... .+++.
T Consensus 120 -D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil 198 (240)
T 3qpm_A 120 -DSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETL 198 (240)
T ss_dssp -SCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHH
T ss_pred -CCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHH
Confidence 4566777888876 899999999999999999998 78999999999999999766432 34444
Q ss_pred HHHHH
Q 001380 563 DLVEA 567 (1089)
Q Consensus 563 ~~l~~ 567 (1089)
+.|+.
T Consensus 199 ~~l~~ 203 (240)
T 3qpm_A 199 RLVQA 203 (240)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 167
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=99.81 E-value=6.4e-20 Score=196.24 Aligned_cols=179 Identities=17% Similarity=0.236 Sum_probs=138.4
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhc----------C-CCHHHHHHHHHhhcCCCCCCHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFM----------G-TGEANFLGGVASVKGVKGFDSEA 145 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~ 145 (1089)
+++++|+||+||||+++.. ..+.+.++++|+....+.+..+. + .+...+...+....+... ..+.
T Consensus 26 ~~ik~viFD~DGTL~d~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~ 101 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDR---ERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMV-SDKQ 101 (229)
T ss_dssp CCCCEEEECSBTTTBCBCH---HHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCC-CHHH
T ss_pred CCCCEEEEeCCCeEEeCCh---HHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCC-CHHH
Confidence 3589999999999999773 45667778888875444333321 1 344555555555444332 2222
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHH------HHCCCCCCCccEEEEcCCcc
Q 001380 146 AKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANL------AAAGLPVSMFDAIVSADAFE 219 (1089)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l------~~~gl~~~~fd~i~~~~~~~ 219 (1089)
.. +.+.+.+ ..++||+.++|+.|+++ ++++|+||+.....+.++ +.+|+. .+||.++++++++
T Consensus 102 ~~----~~~~~~~-----~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~-~~fd~i~~~~~~~ 170 (229)
T 4dcc_A 102 ID----AAWNSFL-----VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVE-DYFEKTYLSYEMK 170 (229)
T ss_dssp HH----HHHHTTB-----CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHH-HHCSEEEEHHHHT
T ss_pred HH----HHHHHHH-----HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHH-HhCCEEEeecccC
Confidence 22 2222221 14679999999999999 999999999998888655 667885 8899999999999
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCC
Q 001380 220 NLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLS 270 (1089)
Q Consensus 220 ~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~ 270 (1089)
..||+|++|+.+++++|++|++|+||||+.+|+++|+++|+.+++|+++..
T Consensus 171 ~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 171 MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 999999999999999999999999999999999999999999999998753
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=1.6e-17 Score=184.71 Aligned_cols=246 Identities=15% Similarity=0.203 Sum_probs=187.7
Q ss_pred CCCCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 594 RLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 594 ~~~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
+.+...+.+|.++++++.++.||+++...++|.++++++. ...+... ...|.+|+++++|+ +|+
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~--------------~~~~~~l~~~~dg~-l~v 84 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHP--------------SHHQNGHCLNKQGH-LIA 84 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESS--------------CSSEEEEEECTTCC-EEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECC--------------CCCcceeeECCCCc-EEE
Confidence 4455678899999999855569999999999999999987 5555433 13689999999998 999
Q ss_pred EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC-----------------C
Q 001380 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA-----------------G 736 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~-----------------~ 736 (1089)
++..++.|.++|+.++.++.+..... ...+..|.+++++++| .+|+++. +
T Consensus 85 ~~~~~~~i~~~d~~~g~~~~~~~~~~------------~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~ 151 (296)
T 3e5z_A 85 CSHGLRRLERQREPGGEWESIADSFE------------GKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELP 151 (296)
T ss_dssp EETTTTEEEEECSTTCCEEEEECEET------------TEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSS
T ss_pred EecCCCeEEEEcCCCCcEEEEeeccC------------CCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCC
Confidence 99988999999998888777653110 1235689999999988 7999875 2
Q ss_pred CcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcC-CCCe-EEEecCC
Q 001380 737 QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK-TGGS-RLLAGGD 814 (1089)
Q Consensus 737 ~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~-~~~~-~~~~g~~ 814 (1089)
.+.|+++++. +.+..+. ..+..|+||+++++|+.| ++++.+++|++++.+ ++.. ...
T Consensus 152 ~~~l~~~~~~-g~~~~~~---------------~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~---- 210 (296)
T 3e5z_A 152 GRWVFRLAPD-GTLSAPI---------------RDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQG---- 210 (296)
T ss_dssp SCEEEEECTT-SCEEEEE---------------CCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEE----
T ss_pred CcEEEEECCC-CCEEEee---------------cCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCC----
Confidence 4689999987 6666554 224578999999999666 999999999999986 3333 100
Q ss_pred CCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCC
Q 001380 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP 894 (1089)
Q Consensus 815 ~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P 894 (1089)
..+.. ....|.++++|++|++||++ ++.|.++|+++..+.++... -. |
T Consensus 211 -----~~~~~----------~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~--------------~~-~ 258 (296)
T 3e5z_A 211 -----VHFTV----------EPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTP--------------QT-T 258 (296)
T ss_dssp -----EEECC----------SSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECS--------------SC-C
T ss_pred -----eEeeC----------CCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECC--------------CC-c
Confidence 00000 13468899999999999999 78999999997777766531 12 8
Q ss_pred ceEEEc-cCC-cEEEEECCCCEEEEEeCCCC
Q 001380 895 AGIIEA-QNG-NLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 895 ~gi~vd-~~G-~lyVad~~n~~I~~~~~~~~ 923 (1089)
..++++ ++| .|||+.. +.|.++++++.
T Consensus 259 ~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~ 287 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVS--TEFWSIETNVR 287 (296)
T ss_dssp CEEEEESTTSCEEEEEET--TEEEEEECSCC
T ss_pred eeEEEECCCCCEEEEEcC--CeEEEEEcccc
Confidence 899995 565 5999874 68999998876
No 169
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.81 E-value=4.4e-20 Score=187.22 Aligned_cols=136 Identities=15% Similarity=0.033 Sum_probs=115.3
Q ss_pred ccCCCCCCCCCCccccCCCCCceeecccc-cCCCEEEEE-EecCCCcchh-hhhhhHHHHHHHcCCCCEEEEE-EeCCCC
Q 001380 422 ENRKTTPIVPEFPAKLDWLNTAPLQFRRD-LKGKVVVLD-FWTYCCINCM-HVLPDLEFLEKKYKDMPFTVVG-VHSAKF 497 (1089)
Q Consensus 422 ~~~~~g~~~P~f~~~~~~~~g~~~~l~~~-~~gk~vll~-Fwa~wC~~C~-~~~p~l~~l~~~~~~~~v~vi~-v~~~~~ 497 (1089)
....+|+++|+|++. .+.+|++++| ++ ++||++||+ ||++||++|+ .|+|.|++++++|+++|+.+|+ |+.
T Consensus 13 ~~~~vG~~aPdf~l~-~~~~g~~v~L-~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~--- 87 (173)
T 3mng_A 13 APIKVGDAIPAVEVF-EGEPGNKVNL-AELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSV--- 87 (173)
T ss_dssp CCCCTTCBCCCCEEE-CSSTTCEEEH-HHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEES---
T ss_pred CCCCCCCCCCCeEee-eCCCCCEEEh-HHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcC---
Confidence 456899999999965 1569999999 88 699976655 5599999999 6999999999999999999997 875
Q ss_pred CChhcHHHHHHHHHHcCCc--cceeecCChhHHHHhCCC-------------ceeEEEEECCCCcEEEEecCCC----ch
Q 001380 498 DNEKDLEAIRNAVLRYGIS--HPVVNDGDMNLWRELGVN-------------SWPTFAVVGPNGKLLAQLAGEG----HR 558 (1089)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~--~~v~~d~~~~l~~~~~v~-------------~~Pt~~lid~~G~i~~~~~G~~----~~ 558 (1089)
++.+..++|+++++++ ||++.|.+++++++||+. ..|++|||| +|+|++.+.+.. +.
T Consensus 88 ---D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~ 163 (173)
T 3mng_A 88 ---NDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTC 163 (173)
T ss_dssp ---SCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSST
T ss_pred ---CCHHHHHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcch
Confidence 5678899999999998 999999999999999986 359999999 999999988754 34
Q ss_pred hhHHHHHH
Q 001380 559 KDLDDLVE 566 (1089)
Q Consensus 559 ~~l~~~l~ 566 (1089)
.+.+++|+
T Consensus 164 ~~~~~vl~ 171 (173)
T 3mng_A 164 SLAPNIIS 171 (173)
T ss_dssp TSHHHHHH
T ss_pred HHHHHHHH
Confidence 55555554
No 170
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.81 E-value=5.4e-20 Score=186.38 Aligned_cols=121 Identities=13% Similarity=0.091 Sum_probs=109.4
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
...+|+++|+|+++ +.+|+++++ ++++||++||+|| ++||++|+.++|.|++++++ .++.+|+|+. +
T Consensus 19 ~l~~G~~aP~f~l~--~~~G~~~~l-~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~------d 86 (166)
T 3p7x_A 19 QINEGDFAPDFTVL--DNDLNQVTL-ADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISA------D 86 (166)
T ss_dssp CCCTTSBCCCCEEE--CTTSCEEEG-GGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEES------S
T ss_pred cCCCCCCCCCeEEE--cCCCCEEeH-HHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEEC------C
Confidence 45789999999964 569999999 9999999999999 78999999999999999877 5799999975 5
Q ss_pred cHHHHHHHHHHcCC-ccceeecC-ChhHHHHhCCCc------eeEEEEECCCCcEEEEecCC
Q 001380 502 DLEAIRNAVLRYGI-SHPVVNDG-DMNLWRELGVNS------WPTFAVVGPNGKLLAQLAGE 555 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~-~~~v~~d~-~~~l~~~~~v~~------~Pt~~lid~~G~i~~~~~G~ 555 (1089)
+.+.+++|++++++ +||++.|. +.++++.||+.. .|++||||++|+|++++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~ 148 (166)
T 3p7x_A 87 LPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVS 148 (166)
T ss_dssp CHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECS
T ss_pred CHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcC
Confidence 67889999999999 89999999 899999999985 89999999999999986543
No 171
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.81 E-value=9.5e-20 Score=185.58 Aligned_cols=133 Identities=14% Similarity=0.018 Sum_probs=114.0
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
...+|+++|+|++. +.+|+++++ ++++||++||+|| ++||++|+.++|.|++++++| .++.+|+|+. +
T Consensus 20 ~l~~g~~~P~f~l~--~~~G~~~~l-~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~------d 88 (171)
T 2yzh_A 20 ELKVGDRAPEAVVV--TKDLQEKIV-GGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSM------D 88 (171)
T ss_dssp CCCTTSBCCCEEEE--ETTSCEEEE-SSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEES------S
T ss_pred cCCCCCcCCceEEE--CCCCCEeeH-HHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeC------C
Confidence 35689999999965 559999999 9999999999999 899999999999999999999 6799999986 3
Q ss_pred cHHHHHHHHHHcCC-ccceeec-CChhHHHHhCCCc---------eeEEEEECCCCcEEEEecCC-----CchhhHHHHH
Q 001380 502 DLEAIRNAVLRYGI-SHPVVND-GDMNLWRELGVNS---------WPTFAVVGPNGKLLAQLAGE-----GHRKDLDDLV 565 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~-~~~v~~d-~~~~l~~~~~v~~---------~Pt~~lid~~G~i~~~~~G~-----~~~~~l~~~l 565 (1089)
+.+.+++|++++++ +|+++.| .+.++ +.|++.. +|++||||++|+|++.+.|. .+.+++.+.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l 167 (171)
T 2yzh_A 89 LPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKV 167 (171)
T ss_dssp CHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHH
Confidence 57788999999999 8999999 88899 9999862 69999999999999998753 2344454444
Q ss_pred HH
Q 001380 566 EA 567 (1089)
Q Consensus 566 ~~ 567 (1089)
++
T Consensus 168 ~~ 169 (171)
T 2yzh_A 168 KE 169 (171)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 172
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.81 E-value=1.3e-17 Score=188.83 Aligned_cols=248 Identities=13% Similarity=0.110 Sum_probs=188.6
Q ss_pred CCCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCC
Q 001380 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~ 679 (1089)
..|.+++++ ++++||+....++|.++|.. ++.+.++... ..|.+|+++++| .+||++..++
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~---------------~~p~~i~~~~~g-~lyv~~~~~~ 105 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGF---------------TSPRYIHFLSDE-KAYVTQIWDY 105 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECC---------------SSEEEEEEEETT-EEEEEEBSCS
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCC---------------CCCcEEEEeCCC-eEEEEECCCC
Confidence 457888886 78999999999999999987 7887777422 379999999888 5999998889
Q ss_pred EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEEEeCCCc
Q 001380 680 ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRAFSGDGY 758 (1089)
Q Consensus 680 ~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~~~g~g~ 758 (1089)
.|.++|+.++++......|... .....|.+|++ +++.|||++.+ .+.|.++|+.++.+......
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~-----------~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-- 170 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMD-----------MESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-- 170 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCC-----------TTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC--
T ss_pred eEEEEECCCCeEEEEEEcCCcc-----------ccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--
Confidence 9999999998876544333210 11347999999 35699999985 88999999998876543311
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCC----------CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCC
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES----------SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~----------~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~d 828 (1089)
-..|.+++++++| ++|+++.+. ++|.++++.++.+.....- + .
T Consensus 171 -------------g~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-----------~--~ 223 (328)
T 3dsm_A 171 -------------GIQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-----------K--L 223 (328)
T ss_dssp -------------SSCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC-----------C--T
T ss_pred -------------CCCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec-----------C--C
Confidence 1368999999998 899999876 8999999987765422110 0 0
Q ss_pred CccccccccCceEEEEccCC-cEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEcc-CCcEE
Q 001380 829 GMGSEVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ-NGNLF 906 (1089)
Q Consensus 829 g~~~~~~l~~P~gva~~~~G-~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~-~G~ly 906 (1089)
-.+|.+++++++| .+||++. .|.++|++++.+.... +.. .....|.||++++ +|+||
T Consensus 224 -------g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~------~~~-----~~~~~p~gi~vdp~~g~ly 282 (328)
T 3dsm_A 224 -------GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRP------FLE-----FRDTKYYGLTVNPNNGEVY 282 (328)
T ss_dssp -------TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSC------SBC-----CCSSCEEEEEECTTTCCEE
T ss_pred -------CCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeee------eec-----CCCCceEEEEEcCCCCeEE
Confidence 1369999999976 6999986 8999999887653110 000 0136799999997 77899
Q ss_pred EEE----CCCCEEEEEeCCCCCceEEEEe
Q 001380 907 IAD----TNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 907 Vad----~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
|++ ..+++|.+|+++++ .+.++.
T Consensus 283 va~~~~y~~~~~V~v~d~~g~--~~~~i~ 309 (328)
T 3dsm_A 283 VADAIDYQQQGIVYRYSPQGK--LIDEFY 309 (328)
T ss_dssp EEECTTSSSEEEEEEECTTCC--EEEEEE
T ss_pred EEcccccccCCEEEEECCCCC--EEEEEE
Confidence 999 88999999999965 666665
No 173
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.81 E-value=4.5e-20 Score=186.59 Aligned_cols=124 Identities=11% Similarity=-0.007 Sum_probs=111.2
Q ss_pred CCCCCCCCCCccccCCCCCceeeccccc-CCCEEEEEEe-cCCCcchhh-hhhhHHHHHHHcCCCCE-EEEEEeCCCCCC
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDL-KGKVVVLDFW-TYCCINCMH-VLPDLEFLEKKYKDMPF-TVVGVHSAKFDN 499 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~-~gk~vll~Fw-a~wC~~C~~-~~p~l~~l~~~~~~~~v-~vi~v~~~~~~~ 499 (1089)
..+|+++|+|++. .+.+|++++| +++ +||++||+|| ++||++|+. |+|.|++++++|+++++ .||+|+.
T Consensus 3 l~~G~~aP~f~l~-~~~~G~~v~L-~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~----- 75 (167)
T 2wfc_A 3 IKEGDKLPAVTVF-GATPNDKVNM-AELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAV----- 75 (167)
T ss_dssp CCTTCBCCCCEEE-SSSTTCEEEH-HHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEES-----
T ss_pred CCCCCcCCCcEee-cCCCCcEEeH-HHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC-----
Confidence 4689999999965 1569999999 888 9999999986 999999999 99999999999988899 9999985
Q ss_pred hhcHHHHHHHHHHcCCc--cceeecCChhHHHHhCCCce-----------eEEEEECCCCcEEEEecCCC
Q 001380 500 EKDLEAIRNAVLRYGIS--HPVVNDGDMNLWRELGVNSW-----------PTFAVVGPNGKLLAQLAGEG 556 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~~~~--~~v~~d~~~~l~~~~~v~~~-----------Pt~~lid~~G~i~~~~~G~~ 556 (1089)
++.+.+++|+++++++ ||++.|.++++++.||+... |++||| ++|+|++.+.+..
T Consensus 76 -d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~~ 143 (167)
T 2wfc_A 76 -NDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVEPD 143 (167)
T ss_dssp -SCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEECTT
T ss_pred -CCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEecCC
Confidence 4677899999999999 99999999999999999754 999999 9999999977653
No 174
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.81 E-value=8e-20 Score=189.93 Aligned_cols=137 Identities=16% Similarity=0.203 Sum_probs=119.4
Q ss_pred CCCCCCCCCccccCCC--CC--ceeeccccc-CCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC
Q 001380 425 KTTPIVPEFPAKLDWL--NT--APLQFRRDL-KGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~--~g--~~~~l~~~~-~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~ 498 (1089)
++|+++|+|++. +. +| +.+++ +++ +||++||+|| ++||++|+.++|.|++++++|++.++.+|+|++
T Consensus 1 ~~G~~aP~f~l~--~~~~~G~~~~~~l-~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~---- 73 (192)
T 2h01_A 1 AFQGQAPSFKAE--AVFGDNTFGEVSL-SDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSV---- 73 (192)
T ss_dssp CCSSBCCCCEEE--EECTTSCEEEEEG-GGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEES----
T ss_pred CCCCcCCCcEeE--eeecCCceeEEeH-HHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEe----
Confidence 378999999964 44 78 89999 888 9999999999 999999999999999999999878899999986
Q ss_pred ChhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC-----ceeEEEEECCCCcEEEEecCCC----chhhHH
Q 001380 499 NEKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN-----SWPTFAVVGPNGKLLAQLAGEG----HRKDLD 562 (1089)
Q Consensus 499 ~~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~-----~~Pt~~lid~~G~i~~~~~G~~----~~~~l~ 562 (1089)
++.+.+++|++++ +++|+++.|.+.++++.|++. .+|++||||++|+|++.+.|.. +.+++.
T Consensus 74 --d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~ 151 (192)
T 2h01_A 74 --DSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEIL 151 (192)
T ss_dssp --SCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHH
T ss_pred --CCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHH
Confidence 3567888899888 889999999999999999999 8999999999999999987743 355666
Q ss_pred HHHHHHHH
Q 001380 563 DLVEAALL 570 (1089)
Q Consensus 563 ~~l~~~l~ 570 (1089)
+.|+.+..
T Consensus 152 ~~l~~l~~ 159 (192)
T 2h01_A 152 RLIDALQH 159 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 66665543
No 175
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.81 E-value=9.1e-20 Score=190.27 Aligned_cols=134 Identities=12% Similarity=0.084 Sum_probs=116.3
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
...+|+++|+|++. +.+|++++| ++++||++||+|| ++||++|+.++|.|++++++| +++.||+|+. +
T Consensus 51 ~l~~G~~aPdf~l~--d~~G~~v~L-~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~------D 119 (200)
T 3zrd_A 51 LPQIGDKAKDFTLV--AKDLSDVAL-SSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISS------D 119 (200)
T ss_dssp CCCTTCBCCCCEEE--CTTSCEEEG-GGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEES------S
T ss_pred cCCCCCCCCCeEEE--CCCCCEEcH-HHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEEC------C
Confidence 45789999999964 569999999 9999999999999 689999999999999999999 5799999985 4
Q ss_pred cHHHHHHHHHHcCC-ccceeecC-ChhHHHHhCCC---------ceeEEEEECCCCcEEEEecCC--CchhhHHHHHHH
Q 001380 502 DLEAIRNAVLRYGI-SHPVVNDG-DMNLWRELGVN---------SWPTFAVVGPNGKLLAQLAGE--GHRKDLDDLVEA 567 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~-~~~v~~d~-~~~l~~~~~v~---------~~Pt~~lid~~G~i~~~~~G~--~~~~~l~~~l~~ 567 (1089)
+.+.+++|++++++ +|+++.|. +.++++.||+. ..|++||||++|+|++.+.+. ....++++.++.
T Consensus 120 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~ 198 (200)
T 3zrd_A 120 LPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYDAALAA 198 (200)
T ss_dssp CHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEecCCcccCCCHHHHHHh
Confidence 67889999999999 99999999 99999999996 369999999999999997654 234445555543
No 176
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.80 E-value=1.2e-19 Score=192.45 Aligned_cols=141 Identities=18% Similarity=0.182 Sum_probs=120.7
Q ss_pred cCCCCCCCCCCcccc-CCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh
Q 001380 423 NRKTTPIVPEFPAKL-DWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~-~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~ 500 (1089)
...+|+++|+|++.. .+.+|+++++ ++++||++||+|| ++||++|+.++|.|++++++|++.++.||+|++
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l-~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~------ 98 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISL-DDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSV------ 98 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEG-GGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEES------
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEH-HHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC------
Confidence 457899999999752 2346889999 9999999999999 999999999999999999999888899999986
Q ss_pred hcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCC----chhhHHH
Q 001380 501 KDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEG----HRKDLDD 563 (1089)
Q Consensus 501 ~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~----~~~~l~~ 563 (1089)
++.+..++|++++ +++||++.|.+.++++.|++. .+|++||||++|+|++++.|.. +.+++.+
T Consensus 99 D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~ 178 (220)
T 1zye_A 99 DSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLR 178 (220)
T ss_dssp SCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHH
Confidence 3456778888877 889999999999999999999 9999999999999999987753 3466666
Q ss_pred HHHHHHH
Q 001380 564 LVEAALL 570 (1089)
Q Consensus 564 ~l~~~l~ 570 (1089)
.|+.+..
T Consensus 179 ~l~~l~~ 185 (220)
T 1zye_A 179 LVKAFQF 185 (220)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 6666543
No 177
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.80 E-value=1e-19 Score=182.71 Aligned_cols=126 Identities=21% Similarity=0.386 Sum_probs=114.8
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhc
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~ 502 (1089)
...+|+++|+|++. +++|+.+++ ++++||++||+||++||++|+.++|.|++++++|++.++.+|+|+.+.
T Consensus 14 ~~~~G~~~p~f~l~--~~~g~~~~l-~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------ 84 (158)
T 3hdc_A 14 LVRTGALAPNFKLP--TLSGENKSL-AQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK------ 84 (158)
T ss_dssp CCCTTSBCCCCEEE--CTTSCEEES-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS------
T ss_pred ccCCCCcCCCceeE--cCCCCEEeh-HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH------
Confidence 46789999999964 569999999 899999999999999999999999999999999998889999997632
Q ss_pred HHHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchh
Q 001380 503 LEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRK 559 (1089)
Q Consensus 503 ~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~ 559 (1089)
.+++++++++++|+++.|.+.++++.|+|.++|++||||++|+++.++.|....+
T Consensus 85 --~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~ 139 (158)
T 3hdc_A 85 --RFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWD 139 (158)
T ss_dssp --SCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTT
T ss_pred --HHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccc
Confidence 4678889999999999999999999999999999999999999999999976543
No 178
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=99.80 E-value=1.1e-19 Score=191.50 Aligned_cols=177 Identities=19% Similarity=0.301 Sum_probs=133.2
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCC-----------CHHHHHHHHHhhcCCCCCCHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGT-----------GEANFLGGVASVKGVKGFDSEAA 146 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 146 (1089)
|+++|+||+||||+++...+. ...++++|+....+.+..+.+. ....+...+....+.. .....
T Consensus 4 m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~- 78 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNREES---IRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKE-LTYQQ- 78 (211)
T ss_dssp CCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSC-CCHHH-
T ss_pred cceEEEEeCCCeeEecchHHH---HHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCC-CCHHH-
Confidence 479999999999999886543 5667777876543333333322 2222333333322211 11111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHH------CCCCCCCccEEEEcCCccC
Q 001380 147 KKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAA------AGLPVSMFDAIVSADAFEN 220 (1089)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~------~gl~~~~fd~i~~~~~~~~ 220 (1089)
+.+.+... ...++||+.++|+.|++ |++++|+||.....++..++. +++. .+|+.++++++.+.
T Consensus 79 ---~~~~~~~~-----~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f~~~~~~~~~~~ 148 (211)
T 2i6x_A 79 ---VYDALLGF-----LEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFFDKVYASCQMGK 148 (211)
T ss_dssp ---HHHHHGGG-----EEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGSSEEEEHHHHTC
T ss_pred ---HHHHHHHh-----hcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHcCeEEeecccCC
Confidence 11111111 12578999999999999 999999999999999999988 7996 99999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC
Q 001380 221 LKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 221 ~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~ 269 (1089)
.||++++|.++++++|++|++|+||||+.+|+.+|+++|+.+++++++.
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999998875
No 179
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.80 E-value=5.8e-20 Score=188.35 Aligned_cols=134 Identities=16% Similarity=0.090 Sum_probs=113.9
Q ss_pred cCCCCCCCCCCccccCCC--CC-ceeecccc-cCCCEE-EEEEecCCCcchhh-hhhhHHHHHHHcCCCCEE-EEEEeCC
Q 001380 423 NRKTTPIVPEFPAKLDWL--NT-APLQFRRD-LKGKVV-VLDFWTYCCINCMH-VLPDLEFLEKKYKDMPFT-VVGVHSA 495 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~--~g-~~~~l~~~-~~gk~v-ll~Fwa~wC~~C~~-~~p~l~~l~~~~~~~~v~-vi~v~~~ 495 (1089)
...+|+++|+|++. ++ +| ++++| ++ ++||++ |++||++||++|+. |+|.|++++++|+++|+. ||+|+.
T Consensus 25 ~l~vG~~aPdf~l~--~~~~~G~~~v~L-~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~- 100 (184)
T 3uma_A 25 TIAVGDKLPNATFK--EKTADGPVEVTT-ELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAV- 100 (184)
T ss_dssp CCCTTCBCCCCEEE--EEETTEEEEEEH-HHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEES-
T ss_pred cCCCCCCCCCcEee--cccCCCceEEeH-HHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEEC-
Confidence 46799999999964 45 78 89999 88 899965 55567999999999 899999999999998999 999986
Q ss_pred CCCChhcHHHHHHHHHHcCCc--cceeecCChhHHHHhCCC-----------ceeEEEEECCCCcEEEEecCCC----ch
Q 001380 496 KFDNEKDLEAIRNAVLRYGIS--HPVVNDGDMNLWRELGVN-----------SWPTFAVVGPNGKLLAQLAGEG----HR 558 (1089)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~--~~v~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~G~~----~~ 558 (1089)
++++..++|+++++++ ||++.|.+++++++||+. ..|++|||| +|+|++.+.++. +.
T Consensus 101 -----d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~~ 174 (184)
T 3uma_A 101 -----NDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESPGQATA 174 (184)
T ss_dssp -----SCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSSTTCCST
T ss_pred -----CCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCCCCCcC
Confidence 4678899999999999 999999999999999996 358899996 999999987652 34
Q ss_pred hhHHHHHH
Q 001380 559 KDLDDLVE 566 (1089)
Q Consensus 559 ~~l~~~l~ 566 (1089)
...+++|+
T Consensus 175 ~~~~~vL~ 182 (184)
T 3uma_A 175 SGAAAMLE 182 (184)
T ss_dssp TSHHHHHH
T ss_pred CCHHHHHh
Confidence 55665554
No 180
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.80 E-value=1.6e-19 Score=188.42 Aligned_cols=139 Identities=18% Similarity=0.211 Sum_probs=119.3
Q ss_pred cCCCCCCCCCCccccCCC-CC--ceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWL-NT--APLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~-~g--~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~ 498 (1089)
...+|+++|+|++. ++ +| +.+++ ++++||++||+|| ++||++|+.++|.|++++++|++.++.+|+|++
T Consensus 4 ~l~~G~~aP~f~l~--~~~~g~~~~v~l-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~---- 76 (197)
T 1qmv_A 4 NARIGKPAPDFKAT--AVVDGAFKEVKL-SDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSV---- 76 (197)
T ss_dssp TBCTTSBCCCCEEE--EEETTEEEEEEG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEES----
T ss_pred cccCCCCCCCeEeE--eecCCCccEEEH-HHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC----
Confidence 35689999999964 44 67 89999 8999999999999 999999999999999999999988999999986
Q ss_pred ChhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCCc----hhhH
Q 001380 499 NEKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEGH----RKDL 561 (1089)
Q Consensus 499 ~~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~~----~~~l 561 (1089)
++.+..++|++++ +++||++.|.+.++++.|++. .+|++||||++|+|++++.|... .+++
T Consensus 77 --d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~ 154 (197)
T 1qmv_A 77 --DSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEA 154 (197)
T ss_dssp --SCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred --CCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHH
Confidence 3456677888877 899999999999999999998 89999999999999999877543 4566
Q ss_pred HHHHHHHHH
Q 001380 562 DDLVEAALL 570 (1089)
Q Consensus 562 ~~~l~~~l~ 570 (1089)
.+.|+.+..
T Consensus 155 l~~l~~l~~ 163 (197)
T 1qmv_A 155 LRLVQAFQY 163 (197)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhcch
Confidence 666665543
No 181
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.80 E-value=8.8e-20 Score=196.77 Aligned_cols=140 Identities=15% Similarity=0.150 Sum_probs=117.8
Q ss_pred hccCCCCCCCCCCcccc-CCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC
Q 001380 421 VENRKTTPIVPEFPAKL-DWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD 498 (1089)
Q Consensus 421 ~~~~~~g~~~P~f~~~~-~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~ 498 (1089)
.....+|+++|+|++.. .+.+|++++| ++++||++||+|| ++||++|+.++|.|++++++|+++++.||+|++
T Consensus 59 ~~~l~vG~~aPdF~l~~l~d~~G~~vsL-sd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~---- 133 (254)
T 3tjj_A 59 LSKAKISKPAPYWEGTAVIDGEFKELKL-TDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSV---- 133 (254)
T ss_dssp CCCCCTTSBCCCCEEEEEETTEEEEEEG-GGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEES----
T ss_pred ccccCCCCCCCCcEeeeecCCCCcEEeH-HHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcC----
Confidence 34567999999999752 2446789999 9999999999999 999999999999999999999988999999986
Q ss_pred ChhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCCC----chhhH
Q 001380 499 NEKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGEG----HRKDL 561 (1089)
Q Consensus 499 ~~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~~----~~~~l 561 (1089)
++.+..++|++++ +++||++.|.+.++++.||+. .+|++||||++|+|++.+.+.. +.+++
T Consensus 134 --D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~ei 211 (254)
T 3tjj_A 134 --DSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDET 211 (254)
T ss_dssp --SCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHH
T ss_pred --CCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHH
Confidence 4566777888776 789999999999999999996 5899999999999999977643 23444
Q ss_pred HHHHHH
Q 001380 562 DDLVEA 567 (1089)
Q Consensus 562 ~~~l~~ 567 (1089)
.+.|+.
T Consensus 212 l~~L~a 217 (254)
T 3tjj_A 212 LRLVQA 217 (254)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444443
No 182
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=99.80 E-value=5.4e-20 Score=197.23 Aligned_cols=201 Identities=14% Similarity=0.185 Sum_probs=144.4
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCH------HhHhhhcCCC-HHHHHHHHHhhcCCCCCCHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTV------EDFLPFMGTG-EANFLGGVASVKGVKGFDSEAAKKR 149 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (1089)
.++++|+||+||||+|+...+..++.++++++|+.... +.+....+.. .......+....... ...+.
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~ 83 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD-----TRLLL 83 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC-----TGGGG
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc-----hHHHH
Confidence 35799999999999999999999999999999876432 2222333333 122222221111111 11122
Q ss_pred HHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHH
Q 001380 150 FFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFL 229 (1089)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~ 229 (1089)
+.+.+... .. ...++||+.++|+.|+++| +++|+||+....++..++.+|+. .+|+.++.. . ++++.++.
T Consensus 84 ~~~~~~~~-~~--~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~-~~f~~~~~~---~--~~K~~~~~ 153 (231)
T 2p11_A 84 MSSFLIDY-PF--ASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW-DEVEGRVLI---Y--IHKELMLD 153 (231)
T ss_dssp GHHHHHHC-CG--GGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH-HHTTTCEEE---E--SSGGGCHH
T ss_pred HHHHHHHH-HH--hCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH-HhcCeeEEe---c--CChHHHHH
Confidence 22222222 11 2378999999999999999 99999999999999999999996 888765542 2 34466777
Q ss_pred HHHHHcCCCCCcEEEEcCChh---hHHHHHHcCCeEEEEcCCC---CHHHHhhc-CCcEEecCcccCCHHHHHh
Q 001380 230 SASKILNVPTSECIVIEDALA---GVQAAKAAQMRCIAVTTTL---SEERLKEA-SPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 230 ~~l~~lgv~p~~~v~VGD~~~---Di~aA~~aG~~~i~V~~g~---~~~~l~~~-~~d~vi~dl~el~i~~ll~ 296 (1089)
.+++ +++|++|+||||+.+ |+.+|+++||++++|.+|. ..+.+... .|++++.++.++ .++|.
T Consensus 154 ~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el--~~~l~ 223 (231)
T 2p11_A 154 QVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL--VEMDA 223 (231)
T ss_dssp HHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG--GGCGG
T ss_pred HHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHH--HHHHH
Confidence 7766 789999999999998 9999999999999999984 44566666 499999999988 44443
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=2.1e-18 Score=188.73 Aligned_cols=201 Identities=20% Similarity=0.323 Sum_probs=155.6
Q ss_pred ccC-CcceeEEeeCCCEEEE-EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEE
Q 001380 655 TFN-RPQGLAYNAKKNLLYV-ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732 (1089)
Q Consensus 655 ~f~-~P~gla~d~~g~~lyV-aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyv 732 (1089)
.|. .|.+|+++++|+ +|| +|..++.|++++..++....+.. ..+..|++|+++++| .|||
T Consensus 21 ~~~~~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~~----------------~~~~~p~~i~~~~~g-~l~v 82 (270)
T 1rwi_B 21 DFRLSPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVLPF----------------NGLYQPQGLAVDGAG-TVYV 82 (270)
T ss_dssp SSCCCEEEEEECTTCC-EEEEECSSSCEEEEECC-----EECCC----------------CSCCSCCCEEECTTC-CEEE
T ss_pred cccCCccceEECCCCC-EEEEccCCCCcEEEecCCCcccceEee----------------CCcCCcceeEECCCC-CEEE
Confidence 455 999999999998 999 99999999999986665544321 114579999999987 5999
Q ss_pred EECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEec
Q 001380 733 AMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAG 812 (1089)
Q Consensus 733 ad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g 812 (1089)
++. ++.|+++|+.++....+.. ..+..|.+|+++++| +|||++..+++|.+++..+.......
T Consensus 83 ~~~-~~~i~~~d~~~~~~~~~~~--------------~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~- 145 (270)
T 1rwi_B 83 TDF-NNRVVTLAAGSNNQTVLPF--------------DGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLP- 145 (270)
T ss_dssp EET-TTEEEEECTTCSCCEECCC--------------CSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECC-
T ss_pred EcC-CCEEEEEeCCCceEeeeec--------------CCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeec-
Confidence 998 8899999988776554421 224579999999998 79999999999999965432221110
Q ss_pred CCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccC
Q 001380 813 GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLS 892 (1089)
Q Consensus 813 ~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~ 892 (1089)
...+..|.+++++++|++||++..+++|.++|++++....... ..+.
T Consensus 146 --------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-------------~~~~ 192 (270)
T 1rwi_B 146 --------------------FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF-------------TDIT 192 (270)
T ss_dssp --------------------CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC-------------SSCC
T ss_pred --------------------cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc-------------cCCC
Confidence 0124579999999999999999999999999998776554321 1357
Q ss_pred CCceEEEccCCcEEEEECCCCEEEEEeCCCC
Q 001380 893 EPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 893 ~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
.|.+|+++++|+|||++..+++|.++++++.
T Consensus 193 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 193 APWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp SEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 7999999999999999999999999999876
No 184
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.80 E-value=1.2e-19 Score=185.58 Aligned_cols=137 Identities=13% Similarity=0.072 Sum_probs=114.9
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCC-CcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYC-CINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~w-C~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
...+|+++|+|++. +.+|+.+++ ++++||++||+||++| |++|+.++|.|++++++ .++.+|+|++ +
T Consensus 17 ~l~~G~~~P~f~l~--~~~G~~v~l-~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~------D 84 (175)
T 1xvq_A 17 LPAVGSPAPAFTLT--GGDLGVISS-DQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSK------D 84 (175)
T ss_dssp CCCTTSBCCCCEEE--CTTSCEEEG-GGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEES------S
T ss_pred CCCcCCcCCCeEEE--CCCCCEEeH-HHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEEC------C
Confidence 35689999999964 569999999 8999999999999998 99999999999999998 5799999986 4
Q ss_pred cHHHHHHHHHHcCC-ccceeecCChhHHHHhCCCce---------eEEEEECCCCcEEEEecC--CCchhhHHHHHHHHH
Q 001380 502 DLEAIRNAVLRYGI-SHPVVNDGDMNLWRELGVNSW---------PTFAVVGPNGKLLAQLAG--EGHRKDLDDLVEAAL 569 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~-~~~v~~d~~~~l~~~~~v~~~---------Pt~~lid~~G~i~~~~~G--~~~~~~l~~~l~~~l 569 (1089)
+.+.+++|++++++ +|+++.|.+.++++.|++... |++||||++|+|++.+.| ......++++|+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 85 LPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp CHHHHTTCC------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 56778999999999 899999999999999999887 999999999999999874 334567888887776
Q ss_pred HH
Q 001380 570 LF 571 (1089)
Q Consensus 570 ~~ 571 (1089)
+.
T Consensus 165 ~~ 166 (175)
T 1xvq_A 165 AT 166 (175)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 185
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.80 E-value=1.6e-17 Score=185.28 Aligned_cols=240 Identities=14% Similarity=0.180 Sum_probs=179.1
Q ss_pred CCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEE
Q 001380 596 FTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675 (1089)
Q Consensus 596 ~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD 675 (1089)
....+.++.++++++.++.||++|..+++|.++++++.....+... ..|.+++++++|+ +|++.
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~---------------~~~~~i~~~~dG~-l~v~~ 71 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMD---------------APVSSVALRQSGG-YVATI 71 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECS---------------SCEEEEEEBTTSS-EEEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCC---------------CceEEEEECCCCC-EEEEE
Confidence 3567789999999988899999999999999999986655554332 2689999999999 89987
Q ss_pred CCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC-----------CCcEEEEEE
Q 001380 676 TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA-----------GQHQIWEHS 744 (1089)
Q Consensus 676 ~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~-----------~~~~I~~~~ 744 (1089)
++.|.++|++++.++.+..... ....+.|++++++++| .+|+++. ..+.|++++
T Consensus 72 --~~~l~~~d~~~g~~~~~~~~~~------------~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 72 --GTKFCALNWKEQSAVVLATVDN------------DKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp --TTEEEEEETTTTEEEEEEECCT------------TCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred --CCeEEEEECCCCcEEEEEecCC------------CCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEE
Confidence 6799999999999888764321 0124579999999988 6999874 346899998
Q ss_pred CCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEc--CCCCeEEEecCCCCCCCCcc
Q 001380 745 TVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNL--KTGGSRLLAGGDPIFPDNLF 822 (1089)
Q Consensus 745 ~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~--~~~~~~~~~g~~~~~~~~l~ 822 (1089)
+. +.+..+. ..+..|+||+++++|+.||++|+.+++|++++. .++..... ..++
T Consensus 137 ~~-g~~~~~~---------------~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~--------~~~~ 192 (297)
T 3g4e_A 137 PD-HHVKKYF---------------DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR--------RSVY 192 (297)
T ss_dssp TT-SCEEEEE---------------EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE--------EEEE
T ss_pred CC-CCEEEEe---------------eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc--------EEEE
Confidence 76 4444333 234579999999999899999999999999986 34433110 0001
Q ss_pred ccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeE-EEEeccCCCCCCCCcccccccCCCceEEEc-
Q 001380 823 KFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV-STLAGIGKAGFKDGAALAAQLSEPAGIIEA- 900 (1089)
Q Consensus 823 ~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v-~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd- 900 (1089)
.+... ...|.|+++|++|+|||++..+++|.++|++++.+ .++.. .-..|+++++.
T Consensus 193 ~~~~~--------~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~--------------p~~~~t~~~f~g 250 (297)
T 3g4e_A 193 KLEKE--------EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL--------------PVDKTTSCCFGG 250 (297)
T ss_dssp ECCGG--------GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC--------------SSSBEEEEEEES
T ss_pred ECCCC--------CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC--------------CCCCceEEEEeC
Confidence 11110 23699999999999999999999999999985554 45432 12458999997
Q ss_pred cCC-cEEEEECCC
Q 001380 901 QNG-NLFIADTNN 912 (1089)
Q Consensus 901 ~~G-~lyVad~~n 912 (1089)
+++ .|||+....
T Consensus 251 ~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 251 KNYSEMYVTCARD 263 (297)
T ss_dssp GGGCEEEEEEBCT
T ss_pred CCCCEEEEEcCCc
Confidence 555 599998654
No 186
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.80 E-value=4.4e-20 Score=188.06 Aligned_cols=137 Identities=18% Similarity=0.173 Sum_probs=118.2
Q ss_pred CCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcc-hhhhhhhHHHHHHHcCCC---CEEEEEEeCCCCCCh
Q 001380 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCIN-CMHVLPDLEFLEKKYKDM---PFTVVGVHSAKFDNE 500 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~-C~~~~p~l~~l~~~~~~~---~v~vi~v~~~~~~~~ 500 (1089)
.+|+++|+|++. +.+| .+++ ++++||++||+||++||++ |+.++|.|++++++|+++ ++.+|+|+++. ..
T Consensus 11 ~~G~~~p~f~l~--~~~g-~~~l-~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~--~~ 84 (172)
T 2k6v_A 11 LLNPKPVDFALE--GPQG-PVRL-SQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP--ER 84 (172)
T ss_dssp EEEEEECCCEEE--CSSS-EEEG-GGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT--TT
T ss_pred ccCCCCCCeEEE--cCCC-CCcH-HHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC--CC
Confidence 357889999964 5699 9999 8999999999999999998 999999999999999864 79999998742 23
Q ss_pred hcHHHHHHHHHHcCCccceeecCC---hhHHHHhCC---------------CceeEEEEECCCCcEEEEecCCC--chhh
Q 001380 501 KDLEAIRNAVLRYGISHPVVNDGD---MNLWRELGV---------------NSWPTFAVVGPNGKLLAQLAGEG--HRKD 560 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~v~~d~~---~~l~~~~~v---------------~~~Pt~~lid~~G~i~~~~~G~~--~~~~ 560 (1089)
++++.+++|+++++++|+++.|.+ .++++.|++ .++|++|||| +|++++++.|.. +.++
T Consensus 85 d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~ 163 (172)
T 2k6v_A 85 DPPEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDR 163 (172)
T ss_dssp CCHHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHH
T ss_pred CCHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHH
Confidence 578899999999999999999987 688888885 4789999999 999999998877 7777
Q ss_pred HHHHHHHH
Q 001380 561 LDDLVEAA 568 (1089)
Q Consensus 561 l~~~l~~~ 568 (1089)
+.+.|+++
T Consensus 164 l~~~l~~l 171 (172)
T 2k6v_A 164 VVADLQAL 171 (172)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 77766543
No 187
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=4.4e-21 Score=192.89 Aligned_cols=139 Identities=19% Similarity=0.334 Sum_probs=121.2
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHH-HHHHcC-CCCEEEEEEeCCCCCChh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEF-LEKKYK-DMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~-l~~~~~-~~~v~vi~v~~~~~~~~~ 501 (1089)
..+|+++|+|++. +.+|+.+++ ++++||++||+||++||++|+.++|.|++ ++++++ +.++.+|+|++ ++
T Consensus 7 l~~g~~~p~f~l~--~~~g~~~~l-~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~-----d~ 78 (159)
T 2ls5_A 7 VRIGEMAPDFTIT--LTDGKQVTL-SSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDR-----DE 78 (159)
Confidence 4689999999954 569999999 89999999999999999999999999998 999998 67899999965 45
Q ss_pred cHHHHHHHHHHcCCccceeecCChhHHHHhC--CCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 502 DLEAIRNAVLRYGISHPVVNDGDMNLWRELG--VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~--v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+.+.++++.++++++||++.|.+.++++.|+ +.++|+++|||++|++++++.|. ..+++.++|+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~-~~~~l~~~l~~l~~~ 149 (159)
T 2ls5_A 79 PLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRLY-NEEEFASLVQQINEM 149 (159)
Confidence 5678899999999999999999999999999 46699999999999999998874 556677776665543
No 188
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=99.79 E-value=2.8e-19 Score=183.46 Aligned_cols=122 Identities=24% Similarity=0.311 Sum_probs=106.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCCh---------------HhHHHHHHHCCCCCCCccEEEE-----cCCccCCCCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADR---------------IKVDANLAAAGLPVSMFDAIVS-----ADAFENLKPA 224 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~---------------~~~~~~l~~~gl~~~~fd~i~~-----~~~~~~~KP~ 224 (1089)
.++||+.++|+.|+++|++++|+||+.. +.++..++.+|. +|+.++. +++....||+
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~---~~~~~~~~~~~~~~~~~~~KP~ 103 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGG---VVDAIFMCPHGPDDGCACRKPL 103 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTC---CCCEEEEECCCTTSCCSSSTTS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCC---ceeEEEEcCCCCCCCCCCCCCC
Confidence 6899999999999999999999999876 677888888883 3556552 5777889999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHh---hcCCcEEecCcccC
Q 001380 225 PDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLK---EASPSLIRKEIGSV 289 (1089)
Q Consensus 225 ~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~---~~~~d~vi~dl~el 289 (1089)
|++|+++++++|++|++|+||||+.+|+++|+++||++++|.+|....+.. ...|++++.++.|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el 171 (179)
T 3l8h_A 104 PGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV 171 (179)
T ss_dssp SHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence 999999999999999999999999999999999999999999998444333 26799999999998
No 189
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.79 E-value=8e-20 Score=185.35 Aligned_cols=136 Identities=18% Similarity=0.118 Sum_probs=116.6
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCC-CcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYC-CINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~w-C~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
...+|+++|+|++. +.+|+++++ ++++||++||+||++| |++|+.++|.|++++++| .++.+|+|++ +
T Consensus 17 ~~~~G~~~p~f~l~--~~~G~~~~l-~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~------d 85 (167)
T 2jsy_A 17 EVKVGDQAPDFTVL--TNSLEEKSL-ADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISA------D 85 (167)
T ss_dssp CCCTTSCCCCCEEE--BTTCCEEEH-HHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEEC------S
T ss_pred ccCCCCcCCceEEE--CCCCCEeeH-HHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEEC------C
Confidence 35689999999965 569999999 8999999999999999 999999999999999999 5799999986 2
Q ss_pred cHHHHHHHHHHcCC-ccceeec-CChhHHHHhCCCc------eeEEEEECCCCcEEEEecCCC-----chhhHHHHHHHH
Q 001380 502 DLEAIRNAVLRYGI-SHPVVND-GDMNLWRELGVNS------WPTFAVVGPNGKLLAQLAGEG-----HRKDLDDLVEAA 568 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~-~~~v~~d-~~~~l~~~~~v~~------~Pt~~lid~~G~i~~~~~G~~-----~~~~l~~~l~~~ 568 (1089)
+.+.+++|++++++ +||++.| .+.++++.|++.. .|++||||++|+|++++.|.. +.+++.+.|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 86 LPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp SGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 45568889999999 8999999 8899999999987 499999999999999987642 235555555554
Q ss_pred H
Q 001380 569 L 569 (1089)
Q Consensus 569 l 569 (1089)
+
T Consensus 166 l 166 (167)
T 2jsy_A 166 V 166 (167)
T ss_dssp H
T ss_pred h
Confidence 4
No 190
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.79 E-value=1.4e-17 Score=186.44 Aligned_cols=256 Identities=15% Similarity=0.213 Sum_probs=187.1
Q ss_pred CCCCCCCCceEEEeecCCeEEEE-------eCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeC
Q 001380 596 FTSPLKFPGKLAIDILNNRLFIS-------DSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK 667 (1089)
Q Consensus 596 ~~~~l~~P~~vavd~~~g~L~vs-------d~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~ 667 (1089)
+..++..|.++++++ +|+||++ +...++|.+++++ |+.. .+...... .....|.+++++++
T Consensus 13 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~---------~~~~~~~~i~~~~~ 81 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVN---------GYGGIPAGCQCDRD 81 (314)
T ss_dssp EECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEET---------TEECCEEEEEECSS
T ss_pred hhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccC---------CCCCCCceEEEecC
Confidence 467789999999995 8899999 8888999999964 6654 33221000 11247899999998
Q ss_pred -CCEEEEEECCCCEEEEEECCCCeEEEE-ecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC--------
Q 001380 668 -KNLLYVADTENHALREIDFVNDTVRTL-AGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ-------- 737 (1089)
Q Consensus 668 -g~~lyVaD~~n~~I~~~d~~~g~v~~~-ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~-------- 737 (1089)
|+ |||++..+ .|.+++.+ +.+..+ ..... ......|++++++++| .+||++.+.
T Consensus 82 ~g~-l~v~~~~~-~l~~~d~~-g~~~~~~~~~~~------------~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 82 ANQ-LFVADMRL-GLLVVQTD-GTFEEIAKKDSE------------GRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYT 145 (314)
T ss_dssp SSE-EEEEETTT-EEEEEETT-SCEEECCSBCTT------------SCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCC
T ss_pred CCc-EEEEECCC-CEEEEeCC-CCEEEEEeccCC------------CccccCCcCEEECCCC-CEEEEecCccccccccc
Confidence 65 99999754 89999998 777766 42110 0124579999999987 899999765
Q ss_pred -------cEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEc----CCCCEEEEEeCCCCeEEEEEcC-CC
Q 001380 738 -------HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS----PDFMEIYVADSESSSIRALNLK-TG 805 (1089)
Q Consensus 738 -------~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~----~~g~~lyvad~~~~~I~~~~~~-~~ 805 (1089)
+.|+++++. +....+. ..+..|++++++ ++|+.||+++..+++|++++.+ ++
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~---------------~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g 209 (314)
T 1pjx_A 146 RSMQEKFGSIYCFTTD-GQMIQVD---------------TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA 209 (314)
T ss_dssp BTTSSSCEEEEEECTT-SCEEEEE---------------EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT
T ss_pred ccccCCCCeEEEECCC-CCEEEec---------------cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC
Confidence 689999987 6555443 123468999999 9987899999999999999875 33
Q ss_pred CeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCC-eEEEEeccCCCCCCCC
Q 001380 806 GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASN-RVSTLAGIGKAGFKDG 884 (1089)
Q Consensus 806 ~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~-~v~t~~g~g~~g~~~g 884 (1089)
....... +..+... .+..|.++++|++|++||++..++.|.++|++++ .+.++..
T Consensus 210 ~~~~~~~--------~~~~~~~-------~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~--------- 265 (314)
T 1pjx_A 210 KIENKKV--------WGHIPGT-------HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC--------- 265 (314)
T ss_dssp EEEEEEE--------EEECCCC-------SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC---------
T ss_pred ccccceE--------EEECCCC-------CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC---------
Confidence 2211000 0000000 0146899999999999999998999999999844 3444432
Q ss_pred cccccccCCCceEEEccCCc-EEEEECCCCEEEEEeCCCC
Q 001380 885 AALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 885 ~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~~~~~~~~ 923 (1089)
....|.+++++++|+ |||++..++.|.+++++..
T Consensus 266 -----~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 266 -----PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp -----SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred -----CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 225699999999998 9999999999999998754
No 191
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.79 E-value=2.6e-19 Score=189.43 Aligned_cols=188 Identities=20% Similarity=0.214 Sum_probs=130.9
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG-VKGFDSEAAKKRFFEIYL 155 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 155 (1089)
.++|+|+||+||||++++. +..+.+.++.......+..........+.+.+..... +.. ...+...+
T Consensus 2 ~~~k~vifDlDGTL~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------ 69 (217)
T 3m1y_A 2 SLQKLAVFDFDSTLVNAET-----IESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKN-MPLKLAKE------ 69 (217)
T ss_dssp CCCEEEEEECBTTTBSSCH-----HHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTTT-CBHHHHHH------
T ss_pred CCCcEEEEeCCCCCCCchh-----HHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhcC-CCHHHHHH------
Confidence 3589999999999999764 3345555555322222211111111112222211111 111 11111111
Q ss_pred HHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcC----------CccCCCCCH
Q 001380 156 DKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSAD----------AFENLKPAP 225 (1089)
Q Consensus 156 ~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~----------~~~~~KP~~ 225 (1089)
.+.. ..++||+.++|+.|+++|++++|+||+....++..++.+|+. .+|+.+++.+ +...+||++
T Consensus 70 -~~~~---~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~~~~~~~~~~~k~k~ 144 (217)
T 3m1y_A 70 -VCES---LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD-AAFSNTLIVENDALNGLVTGHMMFSHSKG 144 (217)
T ss_dssp -HHTT---CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEEESCCSTTHHH
T ss_pred -HHhc---CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc-hhccceeEEeCCEEEeeeccCCCCCCChH
Confidence 1111 378999999999999999999999999999999999999996 8999887433 355689999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCc
Q 001380 226 DIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEI 286 (1089)
Q Consensus 226 ~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl 286 (1089)
.+|+.+++++|+++++|+||||+.+|+.+|+++|+.+++ + ..++++ ..|++++++.
T Consensus 145 ~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~---~~~~l~-~~ad~v~~~~ 200 (217)
T 3m1y_A 145 EMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-N---AKEVLK-QHATHCINEP 200 (217)
T ss_dssp HHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-S---CCHHHH-TTCSEEECSS
T ss_pred HHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-C---ccHHHH-Hhcceeeccc
Confidence 999999999999999999999999999999999998766 2 344554 4699998754
No 192
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.78 E-value=3.5e-19 Score=186.16 Aligned_cols=147 Identities=16% Similarity=0.172 Sum_probs=119.0
Q ss_pred ccCCCCCCC--CCCccccCCCCCceeecccccCCCEEEEEEecCCCcc-hhhhhhhHHHHHHHcCC---CCEEEEEEeCC
Q 001380 422 ENRKTTPIV--PEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCIN-CMHVLPDLEFLEKKYKD---MPFTVVGVHSA 495 (1089)
Q Consensus 422 ~~~~~g~~~--P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~-C~~~~p~l~~l~~~~~~---~~v~vi~v~~~ 495 (1089)
....+|+++ |+|++. +.+|+++++ ++++||++||+||++||++ |+.++|.|+++++++++ .++.+|+|+++
T Consensus 11 ~~~~~g~~~~~p~f~l~--d~~G~~v~l-~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D 87 (200)
T 2b7k_A 11 ANRGYGKPSLGGPFHLE--DMYGNEFTE-KNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD 87 (200)
T ss_dssp -----CCCCCCCCCEEE--ETTSCEEEG-GGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC
T ss_pred hHhccCCCCcCCCEEEE--cCCCCEEeH-HHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC
Confidence 345678886 999964 559999999 8999999999999999998 99999999999988863 37999999874
Q ss_pred CCCChhcHHHHHHHHHHcCCccceeec---CChhHHHHhCCC-cee---------------EEEEECCCCcEEEEecCCC
Q 001380 496 KFDNEKDLEAIRNAVLRYGISHPVVND---GDMNLWRELGVN-SWP---------------TFAVVGPNGKLLAQLAGEG 556 (1089)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~v~~d---~~~~l~~~~~v~-~~P---------------t~~lid~~G~i~~~~~G~~ 556 (1089)
...++++.+++|+++++.+|+.+.+ ...++++.|||. ..| ++||||++|+|+..+.|..
T Consensus 88 --~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~ 165 (200)
T 2b7k_A 88 --PARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNY 165 (200)
T ss_dssp --TTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTC
T ss_pred --CCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCC
Confidence 1235788999999999999987764 356789999997 444 7899999999999999988
Q ss_pred chhhHHHHHHHHHHHhc
Q 001380 557 HRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 557 ~~~~l~~~l~~~l~~~~ 573 (1089)
+.+.+.+.|.++++.+.
T Consensus 166 ~~~~~~~~i~~~l~~l~ 182 (200)
T 2b7k_A 166 DEKTGVDKIVEHVKSYV 182 (200)
T ss_dssp CTTHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 88888888888887654
No 193
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=99.78 E-value=8.8e-19 Score=184.92 Aligned_cols=127 Identities=20% Similarity=0.294 Sum_probs=110.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC---------------hHhHHHHHHHCCCCCCCccEEEEc------------CC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSAD---------------RIKVDANLAAAGLPVSMFDAIVSA------------DA 217 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~---------------~~~~~~~l~~~gl~~~~fd~i~~~------------~~ 217 (1089)
.++||+.++|++|+++|++++|+||+. ...++..++++|+. |+.++.+ ++
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~~~~~~ 126 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVEEFRQV 126 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSGGGBSC
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcccccCcc
Confidence 689999999999999999999999998 47889999999995 7776642 44
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeE-EEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 218 FENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRC-IAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 218 ~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~-i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
....||++++|+.+++++|+++++|+||||+.+|+++|+++||.+ ++|.+|....+.....|++++.++.++ .+++.
T Consensus 127 ~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el--~~~l~ 204 (211)
T 2gmw_A 127 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL--PQAIK 204 (211)
T ss_dssp CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH--HHHHH
T ss_pred CcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHH--HHHHH
Confidence 667999999999999999999999999999999999999999999 999998744444456799999999988 45553
No 194
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.78 E-value=3.9e-19 Score=180.64 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=109.1
Q ss_pred CCCCCCCCCCccccCC--CCC-----ceeeccccc-CCC-EEEEEEecCCCcchhhh-hhhHHHHHHHcCCCCEE-EEEE
Q 001380 424 RKTTPIVPEFPAKLDW--LNT-----APLQFRRDL-KGK-VVVLDFWTYCCINCMHV-LPDLEFLEKKYKDMPFT-VVGV 492 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~--~~g-----~~~~l~~~~-~gk-~vll~Fwa~wC~~C~~~-~p~l~~l~~~~~~~~v~-vi~v 492 (1089)
..+|+++|+|++.... -+| ++++| +++ +|| +||++||++||++|+.| +|.|++++++|+++++. ||+|
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l-~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPV-NDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEH-HHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEH-HHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 3567899999965321 146 89999 886 996 67778999999999999 99999999999888899 9999
Q ss_pred eCCCCCChhcHHHHHHHHHHcCC--ccceeecCChhHHHHhCCCc-----------eeEEEEECCCCcEEEEecCCCc--
Q 001380 493 HSAKFDNEKDLEAIRNAVLRYGI--SHPVVNDGDMNLWRELGVNS-----------WPTFAVVGPNGKLLAQLAGEGH-- 557 (1089)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~d~~~~l~~~~~v~~-----------~Pt~~lid~~G~i~~~~~G~~~-- 557 (1089)
+. ++.+..++|++++++ +||++.|.++++++.||+.. +|++++|| +|+|++.+.|...
T Consensus 86 s~------d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~~~~ 158 (171)
T 2pwj_A 86 AI------NDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVEESPSD 158 (171)
T ss_dssp ES------SCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEECSSTTC
T ss_pred eC------CCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEeecCCCC
Confidence 85 356788999999996 79999999999999999863 56899999 9999999887643
Q ss_pred --hhhHHHHHH
Q 001380 558 --RKDLDDLVE 566 (1089)
Q Consensus 558 --~~~l~~~l~ 566 (1089)
....+++|+
T Consensus 159 ~~~~~~~~il~ 169 (171)
T 2pwj_A 159 VKVSGAETILG 169 (171)
T ss_dssp CSSSSHHHHHH
T ss_pred CcccCHHHHHh
Confidence 344444443
No 195
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.78 E-value=7.7e-19 Score=178.49 Aligned_cols=140 Identities=19% Similarity=0.183 Sum_probs=114.8
Q ss_pred CCCCCCC-CCccccCCCCCceeecccccCCCEEEEEEecCCCc-chhhhhhhHHHHHHHcCC--CCEEEEEEeCCCCCCh
Q 001380 425 KTTPIVP-EFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCI-NCMHVLPDLEFLEKKYKD--MPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 425 ~~g~~~P-~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~-~C~~~~p~l~~l~~~~~~--~~v~vi~v~~~~~~~~ 500 (1089)
.+|+++| +|++. +.+|+++++ ++++||++||+||++||+ .|..+++.|++++++|++ .++.+|+|+++ ..
T Consensus 2 ~~G~~~P~~f~l~--d~~G~~v~l-~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d---~~ 75 (170)
T 3me7_A 2 SLGTYVPGDITLV--DSYGNEFQL-KNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD---PK 75 (170)
T ss_dssp CTTCBCCTTCEEE--ETTCCEEEG-GGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC---TT
T ss_pred CCCCcCCCCeEEE--cCCcCEEch-HHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC---CC
Confidence 4799999 99965 559999999 899999999999999998 599999999999999975 56999999984 35
Q ss_pred hcHHHHHHHHHHcCCccce---ee--c--CChhHHHHhCC---------CceeEEEEECCCCcEEEEecCC-CchhhHHH
Q 001380 501 KDLEAIRNAVLRYGISHPV---VN--D--GDMNLWRELGV---------NSWPTFAVVGPNGKLLAQLAGE-GHRKDLDD 563 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~v---~~--d--~~~~l~~~~~v---------~~~Pt~~lid~~G~i~~~~~G~-~~~~~l~~ 563 (1089)
++++.+++|+++++++++. +. | ...++++.||+ ...|++||||++|+|+..+.|. ...+++.+
T Consensus 76 d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~ 155 (170)
T 3me7_A 76 DTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVN 155 (170)
T ss_dssp CCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHH
Confidence 7899999999999987653 22 2 34578888775 4568999999999999998886 45666666
Q ss_pred HHHHHHH
Q 001380 564 LVEAALL 570 (1089)
Q Consensus 564 ~l~~~l~ 570 (1089)
.|++++.
T Consensus 156 ~l~~~~~ 162 (170)
T 3me7_A 156 ALRLARG 162 (170)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 6555443
No 196
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.77 E-value=1.6e-18 Score=183.83 Aligned_cols=137 Identities=17% Similarity=0.198 Sum_probs=113.4
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCC--EEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGK--VVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk--~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
..+|+.+|+|++. +.+| ++++ ++++|| +||++||++||++|..|++.|++++++|++.++.+|+||+ +
T Consensus 5 l~~G~~aP~F~l~--~~~G-~v~l-~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~---D--- 74 (224)
T 1prx_A 5 LLLGDVAPNFEAN--TTVG-RIRF-HDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSI---D--- 74 (224)
T ss_dssp CCTTCBCCCCEEE--ETTE-EEEH-HHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEES---S---
T ss_pred CCCcCCCCCcEEe--cCCC-CEEH-HHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcC---C---
Confidence 5689999999965 4488 9999 999998 5666679999999999999999999999988999999987 2
Q ss_pred cHHHHHHHHHH----------cCCccceeecCChhHHHHhCCC------------ceeEEEEECCCCcEEEEecCCC---
Q 001380 502 DLEAIRNAVLR----------YGISHPVVNDGDMNLWRELGVN------------SWPTFAVVGPNGKLLAQLAGEG--- 556 (1089)
Q Consensus 502 ~~~~~~~~~~~----------~~~~~~v~~d~~~~l~~~~~v~------------~~Pt~~lid~~G~i~~~~~G~~--- 556 (1089)
+.+..++|+++ ++++||++.|.+.++++.||+. .+|++||||++|+|++.+.+..
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~g 154 (224)
T 1prx_A 75 SVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTG 154 (224)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBC
T ss_pred CHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCC
Confidence 33444555554 7899999999999999999984 4799999999999999987643
Q ss_pred -chhhHHHHHHHHHH
Q 001380 557 -HRKDLDDLVEAALL 570 (1089)
Q Consensus 557 -~~~~l~~~l~~~l~ 570 (1089)
+.+++.+.|+.+..
T Consensus 155 r~~~eil~~i~~l~~ 169 (224)
T 1prx_A 155 RNFDEILRVVISLQL 169 (224)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 46677777766554
No 197
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.77 E-value=9.2e-19 Score=186.07 Aligned_cols=137 Identities=18% Similarity=0.213 Sum_probs=114.6
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCC-EEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGK-VVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk-~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
..+|+++|+|++. +.+| ++++ ++++|| ++||+|| ++||++|..|++.|++++++|++.++.||+||+ +
T Consensus 3 l~iG~~aPdF~l~--~~~G-~v~l-~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~---D--- 72 (233)
T 2v2g_A 3 ITLGEVFPNFEAD--STIG-KLKF-HDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSC---D--- 72 (233)
T ss_dssp CCTTCBCCCCEEE--ETTC-CEEH-HHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEES---S---
T ss_pred CCCCCCCCCcEEe--cCCC-CEEH-HHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcC---C---
Confidence 4689999999965 4488 8999 999998 9999998 999999999999999999999988999999987 2
Q ss_pred cHHHHHHHHH------Hc--CCccceeecCChhHHHHhCCC------------ceeEEEEECCCCcEEEEecCCC----c
Q 001380 502 DLEAIRNAVL------RY--GISHPVVNDGDMNLWRELGVN------------SWPTFAVVGPNGKLLAQLAGEG----H 557 (1089)
Q Consensus 502 ~~~~~~~~~~------~~--~~~~~v~~d~~~~l~~~~~v~------------~~Pt~~lid~~G~i~~~~~G~~----~ 557 (1089)
+.+..++|++ ++ +++||++.|.+.++++.||+. .+|++||||++|+|++.+.+.. +
T Consensus 73 ~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~ 152 (233)
T 2v2g_A 73 NVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRN 152 (233)
T ss_dssp CHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCC
T ss_pred CHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCC
Confidence 3344555555 56 899999999999999999985 5799999999999999976533 4
Q ss_pred hhhHHHHHHHHHH
Q 001380 558 RKDLDDLVEAALL 570 (1089)
Q Consensus 558 ~~~l~~~l~~~l~ 570 (1089)
.+++.+.|+.+..
T Consensus 153 ~~eilr~l~~Lq~ 165 (233)
T 2v2g_A 153 FSEILRVIDSLQL 165 (233)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5666666665543
No 198
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.77 E-value=2.6e-17 Score=185.66 Aligned_cols=225 Identities=13% Similarity=0.195 Sum_probs=165.0
Q ss_pred ccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCC--CCCCC-CcccccccCCceeEEEecCCCEEE
Q 001380 655 TFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGS--DYQGG-EKGTSQLLNSPWDVCYKPINEKVY 731 (1089)
Q Consensus 655 ~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~--~~~~~-~~~~~~~l~~P~~la~~~~g~~ly 731 (1089)
.|..|.+++++++|+ +|++|..+++|++++.+++.++.+........ ...+. .......+..|.+|+++++++.||
T Consensus 17 ~~~~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 17 PSYAPNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp SSSCCCCEECCTTCS-SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred ccCCceEEEEcCCCC-EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 377999999999988 66678889999999998888887764321110 00000 011122346799999998445999
Q ss_pred EEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcC-CCCEEEEEeCC-----------------
Q 001380 732 IAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP-DFMEIYVADSE----------------- 793 (1089)
Q Consensus 732 vad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~-~g~~lyvad~~----------------- 793 (1089)
|++.+ +.|+++|+.++.++.+.... . ...+..|++|++++ +| +|||+|..
T Consensus 96 v~d~~-~~i~~~d~~~g~~~~~~~~~-----~-----~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 96 IVDCY-YHLSVVGSEGGHATQLATSV-----D-----GVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EEETT-TEEEEECTTCEECEEEESEE-----T-----TEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred EEECC-CCEEEEeCCCCEEEEecccC-----C-----CCcccccceEEEecCCC-EEEEECCcccccccccceehcccCC
Confidence 99986 45999999888777665321 0 13456799999999 88 99999976
Q ss_pred CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCCCC---e
Q 001380 794 SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASN---R 869 (1089)
Q Consensus 794 ~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~---~ 869 (1089)
.++|++++++++.+..+.. .+..|.||+++++|+ +||+|+.+++|.+++.++. .
T Consensus 164 ~g~v~~~d~~~~~~~~~~~----------------------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~ 221 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLK----------------------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT 221 (322)
T ss_dssp CEEEEEEETTTTEEEEEEE----------------------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC
T ss_pred CceEEEEeCCCCEEEEecc----------------------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc
Confidence 3679999987666554432 156899999999986 9999999999999998753 3
Q ss_pred EEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECC----------CCEEEEEeCCCCCceEEEEe
Q 001380 870 VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN----------NNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 870 v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~----------n~~I~~~~~~~~~~~~~~l~ 931 (1089)
...+.. +..|.||++|++|+|||++.. +++|.++++++. .+..+.
T Consensus 222 ~~~~~~---------------~~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~--~~~~~~ 276 (322)
T 2fp8_A 222 AEVLVK---------------IPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGN--ILEVIP 276 (322)
T ss_dssp EEEEEE---------------CSSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSC--EEEEEE
T ss_pred cceEEe---------------CCCCCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCC--EEEEEE
Confidence 333321 112999999999999999976 688999999876 555554
No 199
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=99.77 E-value=5.3e-19 Score=188.51 Aligned_cols=192 Identities=16% Similarity=0.149 Sum_probs=132.3
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCH-HhHhhhcCC--CHHHHHHHHHhhcCCCCCCHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTV-EDFLPFMGT--GEANFLGGVASVKGVKGFDSEAAKKRFFEI 153 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1089)
+++++|+||+||||+|++. +.++++.+|..... +.+....+. .............. . .. +.+.+.
T Consensus 12 ~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~----~~~~~~ 79 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ--P-SR----EQVQRL 79 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHC--C-CH----HHHHHH
T ss_pred hhCCEEEEeCccccccccc-----HHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhc--C-CH----HHHHHH
Confidence 4579999999999999874 45778888886432 233333332 22222222221111 0 11 112222
Q ss_pred HHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCC-CCccEEE--------EcCCccC----
Q 001380 154 YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPV-SMFDAIV--------SADAFEN---- 220 (1089)
Q Consensus 154 ~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~-~~fd~i~--------~~~~~~~---- 220 (1089)
+.. ....++||+.++|+.|+++|++++|+||+....++..++++|+.. .+|+.++ ++.+...
T Consensus 80 ~~~-----~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 154 (225)
T 1nnl_A 80 IAE-----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAE 154 (225)
T ss_dssp HHH-----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGS
T ss_pred HHh-----ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccC
Confidence 211 123789999999999999999999999999999999999999951 3777653 3333221
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 221 LKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 221 ~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
.||||++|+++++++|+ ++|+||||+.+|+.+|+++|+ ++++..+...+ .....+++++.++.++
T Consensus 155 ~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~-~~~~~~~~~~~~~~el 219 (225)
T 1nnl_A 155 SGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQ-QVKDNAKWYITDFVEL 219 (225)
T ss_dssp TTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCH-HHHHHCSEEESCGGGG
T ss_pred CCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccH-HHHhcCCeeecCHHHH
Confidence 46888999999999998 789999999999999999999 88886543222 2334799999999887
No 200
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.77 E-value=1.4e-18 Score=183.75 Aligned_cols=142 Identities=13% Similarity=0.203 Sum_probs=114.0
Q ss_pred CCCCCCCCCCccccCCC--CCceeecccccCCC-E-EEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 424 RKTTPIVPEFPAKLDWL--NTAPLQFRRDLKGK-V-VVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~--~g~~~~l~~~~~gk-~-vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
..+|+++|+|++. +. +| ++++ ++++|| + ||++||++||++|..|++.|++++++|+++++.+|+||+ +.
T Consensus 3 l~iG~~aP~F~l~--~~~~~G-~v~l-~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~---D~ 75 (220)
T 1xcc_A 3 YHLGATFPNFTAK--ASGIDG-DFEL-YKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSC---NS 75 (220)
T ss_dssp CCTTCBCCCCEEC--BTTCSS-CEEH-HHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEES---SC
T ss_pred CCCCCCCCCcEee--cccCCC-cEeH-HHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeC---CC
Confidence 4689999999964 45 77 8999 999998 5 555568999999999999999999999988999999997 33
Q ss_pred hhcHHHHHHHHH----HcCCccceeecCChhHHHHhCCC------------ceeEEEEECCCCcEEEEecCC----Cchh
Q 001380 500 EKDLEAIRNAVL----RYGISHPVVNDGDMNLWRELGVN------------SWPTFAVVGPNGKLLAQLAGE----GHRK 559 (1089)
Q Consensus 500 ~~~~~~~~~~~~----~~~~~~~v~~d~~~~l~~~~~v~------------~~Pt~~lid~~G~i~~~~~G~----~~~~ 559 (1089)
.+...+|.+.++ +++++||++.|.++++++.||+. .+|++||||++|+|++.+.+. .+.+
T Consensus 76 ~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ 155 (220)
T 1xcc_A 76 KESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAH 155 (220)
T ss_dssp HHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHH
Confidence 334444443332 57899999999999999999984 479999999999999997643 3567
Q ss_pred hHHHHHHHHHHHh
Q 001380 560 DLDDLVEAALLFY 572 (1089)
Q Consensus 560 ~l~~~l~~~l~~~ 572 (1089)
++.+.|+.+....
T Consensus 156 ell~~i~~lq~~~ 168 (220)
T 1xcc_A 156 EILRVLKSLQLTY 168 (220)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 7777777665433
No 201
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=99.77 E-value=2.5e-19 Score=187.95 Aligned_cols=179 Identities=13% Similarity=0.173 Sum_probs=129.5
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcC-----------CCHHHHHHHHHhhcCCCCCCHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMG-----------TGEANFLGGVASVKGVKGFDSEA 145 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 145 (1089)
+++++|+||+||||+++.. ..+...+++++.....+.+..+.+ .+...+...+....+... ...
T Consensus 5 ~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~- 79 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPL-SYE- 79 (206)
T ss_dssp -CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCC-CHH-
T ss_pred ccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCC-CHH-
Confidence 4579999999999999873 223344555555433333333222 123333333333333211 211
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHH-CCCCCCCccEEEEcCCccCCCCC
Q 001380 146 AKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAA-AGLPVSMFDAIVSADAFENLKPA 224 (1089)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~-~gl~~~~fd~i~~~~~~~~~KP~ 224 (1089)
++.+.+... ...++||+.++|+.|+++|++++|+||.....++..++. +|+. .+|+.++++++.+..||+
T Consensus 80 ---~~~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f~~~~~~~~~~~~Kp~ 150 (206)
T 2b0c_A 80 ---QFSHGWQAV-----FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADHIYLSQDLGMRKPE 150 (206)
T ss_dssp ---HHHHHHHTC-----EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSEEEEHHHHTCCTTC
T ss_pred ---HHHHHHHHH-----hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hheeeEEEecccCCCCCC
Confidence 122222111 126799999999999999999999999887776666666 6775 889999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC
Q 001380 225 PDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 225 ~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~ 269 (1089)
+++|..+++++|+++++|+||||+.+|+.+|+++|+.+++++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 151 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 999999999999999999999999999999999999999998875
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.76 E-value=1.5e-16 Score=178.04 Aligned_cols=244 Identities=17% Similarity=0.206 Sum_probs=183.1
Q ss_pred CCCCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 594 RLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 594 ~~~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
+...+.+..+.++++++.++.||++|..+++|.+++.+|+.. .+... -..|.+++++++|+ ||+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~-~~~~~--------------~~~~~gl~~d~dG~-l~v 101 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVD-VLLDA--------------TAFTNGNAVDAQQR-LVH 101 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEE-EEEES--------------CSCEEEEEECTTSC-EEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEE-EEeCC--------------CCccceeeECCCCC-EEE
Confidence 345677889999999986667999999999999999988754 33322 13689999999998 999
Q ss_pred EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC-----------------C
Q 001380 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA-----------------G 736 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~-----------------~ 736 (1089)
++..+++|.+++.+ +.++.+.... ....+++|++++++++| .+|++|. .
T Consensus 102 ~~~~~~~v~~~~~~-g~~~~~~~~~------------~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~ 167 (305)
T 3dr2_A 102 CEHGRRAITRSDAD-GQAHLLVGRY------------AGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELA 167 (305)
T ss_dssp EETTTTEEEEECTT-SCEEEEECEE------------TTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSS
T ss_pred EECCCCEEEEECCC-CCEEEEEecc------------CCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccC
Confidence 99988999999987 6677765311 01236789999999988 7999864 2
Q ss_pred CcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCC-----CeEEEEEcCCCCeEEEe
Q 001380 737 QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES-----SSIRALNLKTGGSRLLA 811 (1089)
Q Consensus 737 ~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~-----~~I~~~~~~~~~~~~~~ 811 (1089)
.+.|+++++.++.+..+. .+..|+||+++++|+.|||+++.+ ++|++++.+++......
T Consensus 168 ~~~v~~~d~~~g~~~~~~----------------~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~ 231 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA----------------DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRR 231 (305)
T ss_dssp CEEEEEECSSSCCCEEEE----------------EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEE
T ss_pred CCeEEEEcCCCCcEEEEe----------------cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCe
Confidence 368999999877766553 134689999999998899999874 79999998754421000
Q ss_pred cCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCccccccc
Q 001380 812 GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891 (1089)
Q Consensus 812 g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l 891 (1089)
.+..+ ....|.|+++|++|+|||+. .+.|.++++++..+.++...
T Consensus 232 --------~~~~~----------~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g~~~~~~~~~--------------- 276 (305)
T 3dr2_A 232 --------HFASV----------PDGLPDGFCVDRGGWLWSSS--GTGVCVFDSDGQLLGHIPTP--------------- 276 (305)
T ss_dssp --------EEECC----------SSSCCCSEEECTTSCEEECC--SSEEEEECTTSCEEEEEECS---------------
T ss_pred --------EEEEC----------CCCCCCeEEECCCCCEEEec--CCcEEEECCCCCEEEEEECC---------------
Confidence 00000 02358899999999999998 45799999988777777531
Q ss_pred CCCceEEEccCC-cEEEEECCCCEEEEEeC
Q 001380 892 SEPAGIIEAQNG-NLFIADTNNNIIRYLDL 920 (1089)
Q Consensus 892 ~~P~gi~vd~~G-~lyVad~~n~~I~~~~~ 920 (1089)
..|..+++++++ .|||+.. +.|.++++
T Consensus 277 ~~~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 277 GTASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp SCCCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred CceeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 138899998766 5999874 57777765
No 203
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.76 E-value=2.1e-15 Score=171.28 Aligned_cols=254 Identities=14% Similarity=0.154 Sum_probs=191.7
Q ss_pred CCCceEEEeecCCeEEEEeCC------CCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 601 KFPGKLAIDILNNRLFISDSN------HNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~------~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
..|.++++++.+++||+++.+ .++|.++|.+ ++.+..+... ..|.+++++++|+.+|+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~v 105 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND---------------LKPFGATINNTTQTLWF 105 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES---------------SCCCSEEEETTTTEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC---------------CCcceEEECCCCCEEEE
Confidence 357789999977899999976 6789999986 6777666543 25899999999999999
Q ss_pred EECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC-CCcEEEEEECCCCeEEE
Q 001380 674 ADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA-GQHQIWEHSTVDGVTRA 752 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~-~~~~I~~~~~~~g~~~~ 752 (1089)
++..++.|..+|++++.+......+..... ....-..|++++++|+|+.+|+++. ..+.|+.+|..++....
T Consensus 106 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 106 GNTVNSAVTAIDAKTGEVKGRLVLDDRKRT-------EEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT 178 (353)
T ss_dssp EETTTTEEEEEETTTCCEEEEEESCCCCCC-------SSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE
T ss_pred EecCCCEEEEEeCCCCeeEEEEecCCCccc-------cccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE
Confidence 999999999999988776444332211100 0011235899999999999999995 47889999999887654
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
.... .-..|.+++++++|+.||+++. ++.|..++..++........ +.. +
T Consensus 179 ~~~~--------------~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~-----------~~~-~--- 228 (353)
T 3vgz_A 179 AIQN--------------TGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKL-----------LDD-G--- 228 (353)
T ss_dssp EECC--------------CCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEEC-----------CCS-S---
T ss_pred EecC--------------CCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEc-----------CCC-C---
Confidence 4320 1124889999999999999986 68999999987765432211 000 0
Q ss_pred cccccCceEEEEccCCc-EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEEC
Q 001380 833 EVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADT 910 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~ 910 (1089)
.-..|.+++++++|+ +|+++...+.|.++|..++.+..... ...|.+++++++|+ +|+++.
T Consensus 229 --~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~---------------~~~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 229 --KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA---------------APESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp --SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE---------------CSSCCCEEEETTTTEEEEEET
T ss_pred --CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE---------------cCCCceEEECCCCCEEEEEEC
Confidence 123578999999985 99999999999999998777654432 23467899999986 999999
Q ss_pred CCCEEEEEeCCCC
Q 001380 911 NNNIIRYLDLNKE 923 (1089)
Q Consensus 911 ~n~~I~~~~~~~~ 923 (1089)
.++.|.++++.+.
T Consensus 292 ~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 292 QAGKVSVIDAKSY 304 (353)
T ss_dssp TTTEEEEEETTTT
T ss_pred CCCeEEEEECCCC
Confidence 9999999999876
No 204
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.76 E-value=3.5e-18 Score=178.20 Aligned_cols=135 Identities=6% Similarity=-0.027 Sum_probs=113.5
Q ss_pred cCCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCC-Ccchh-----hhhhhHHHHHHHcCCCCEEEEEEeCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYC-CINCM-----HVLPDLEFLEKKYKDMPFTVVGVHSAK 496 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~w-C~~C~-----~~~p~l~~l~~~~~~~~v~vi~v~~~~ 496 (1089)
...+|+++|+|++. +.+|+.++| ++++||++||+||++| |++|. .+++.|+++ | .++.||+||.
T Consensus 21 ~l~vG~~APdFtL~--d~~G~~vsL-sd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~-- 90 (224)
T 3keb_A 21 FPRKGDYLPSFMLV--DDQKHDAAL-ESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITV-- 90 (224)
T ss_dssp CCCTTCBCCCCEEE--ETTSCEEEG-GGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEES--
T ss_pred cCCCCCCCCCeEEE--CCCCCEEeH-HHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEEC--
Confidence 35789999999965 558999999 8899999999999888 99999 888888877 5 5799999985
Q ss_pred CCChhcHHHHHHHHHHcCC-ccceeecC-ChhHHHHhCCCc---------eeEEEEECCCCcEEEEecC-----CCchhh
Q 001380 497 FDNEKDLEAIRNAVLRYGI-SHPVVNDG-DMNLWRELGVNS---------WPTFAVVGPNGKLLAQLAG-----EGHRKD 560 (1089)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~-~~~v~~d~-~~~l~~~~~v~~---------~Pt~~lid~~G~i~~~~~G-----~~~~~~ 560 (1089)
++++..++|++++++ +|+++.|. +.++++.|||.. .|++||||++|+|++.+.. ..+.++
T Consensus 91 ----Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~e 166 (224)
T 3keb_A 91 ----DSPSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDA 166 (224)
T ss_dssp ----SCHHHHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHH
T ss_pred ----CCHHHHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHH
Confidence 577889999999999 69999998 699999999975 7999999999999998653 234566
Q ss_pred HHHHHHHHHHH
Q 001380 561 LDDLVEAALLF 571 (1089)
Q Consensus 561 l~~~l~~~l~~ 571 (1089)
+.+.|+.+.+.
T Consensus 167 vl~~L~~l~~~ 177 (224)
T 3keb_A 167 IEKLLQEGEQQ 177 (224)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhhc
Confidence 66666655443
No 205
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.76 E-value=8.8e-19 Score=172.85 Aligned_cols=120 Identities=19% Similarity=0.206 Sum_probs=105.7
Q ss_pred CCCCCCCC-CccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC-CCEEEEEEeCCCCCChhc
Q 001380 425 KTTPIVPE-FPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD-MPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 425 ~~g~~~P~-f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~v~vi~v~~~~~~~~~~ 502 (1089)
..++.+|+ |++. +++|+.+++ ++++||++||+||++||++|+.++|.|++++++|++ .++.+|+|++ +++
T Consensus 2 ~~~~~~P~~f~l~--~~~g~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~-----d~~ 73 (144)
T 1i5g_A 2 GLKKFFPYSTNVL--KGAAADIAL-PSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISW-----DES 73 (144)
T ss_dssp TTTTSCSSCSEEE--ETTEEEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEC-----CSS
T ss_pred chhhhCCCceEEE--cCCCCEecH-HHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeC-----CCC
Confidence 46789999 9964 559999999 899999999999999999999999999999999985 6899999976 457
Q ss_pred HHHHHHHHHHcCC-ccceee-cCChhHHHHhCCCceeEEEEEC-CCCcEEEEe
Q 001380 503 LEAIRNAVLRYGI-SHPVVN-DGDMNLWRELGVNSWPTFAVVG-PNGKLLAQL 552 (1089)
Q Consensus 503 ~~~~~~~~~~~~~-~~~v~~-d~~~~l~~~~~v~~~Pt~~lid-~~G~i~~~~ 552 (1089)
.+.+++++++++. .+++.. |....+++.|+|.++|+++||| ++|+++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 74 AEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp HHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEecc
Confidence 8899999999885 466655 5678899999999999999999 999999874
No 206
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=99.76 E-value=7e-20 Score=197.85 Aligned_cols=204 Identities=19% Similarity=0.247 Sum_probs=146.4
Q ss_pred CceEEEEecCCcccCCchHHHHH--HHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHH--HHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRA--AVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAA--KKRFFEI 153 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 153 (1089)
++|+|+||+||||+++...+..+ +.+.+++.|+... ..+...+++...+...+.. .+... ..... .......
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~--~~t~~~g~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~ 77 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLV--LLTNYPSQTGQDLANRFAT-AGVDV-PDSVFYTSAMATAD 77 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEE--EEESCCSCCHHHHHHHHHH-TTCCC-CGGGEEEHHHHHHH
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEE--EEECCCCCCHHHHHHHHHH-cCCCC-CHHHeEcHHHHHHH
Confidence 47999999999999988766555 5566677787643 2333456777777666655 34321 11110 0111122
Q ss_pred HHHHhcCCCCCCCCccHHHHHHHHHhCCCeEE---------------------------------EEcCCChHhHHHHHH
Q 001380 154 YLDKYAKPNSGIGFPGALELINQCKSKGLKVA---------------------------------VASSADRIKVDANLA 200 (1089)
Q Consensus 154 ~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~va---------------------------------IvSn~~~~~~~~~l~ 200 (1089)
+.+.+.. ...+++|+.++++.|++.|++++ ++||.. ......++
T Consensus 78 ~~~~~~~--~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~ 154 (250)
T 2c4n_A 78 FLRRQEG--KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYP 154 (250)
T ss_dssp HHHTSSC--CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCB
T ss_pred HHHhcCC--CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeee
Confidence 3333222 23678999999999999999999 888865 33333333
Q ss_pred HCC-CCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCeEEEEcCCC-CHHHHhh-
Q 001380 201 AAG-LPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDA-LAGVQAAKAAQMRCIAVTTTL-SEERLKE- 276 (1089)
Q Consensus 201 ~~g-l~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~-~~Di~aA~~aG~~~i~V~~g~-~~~~l~~- 276 (1089)
.++ +. .+|+.+.+.+....+||++.+|+.+++++|+++++|++|||+ .+|++||+.+|+.+++|.+|. ..+++..
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~ 233 (250)
T 2c4n_A 155 ACGALC-AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSM 233 (250)
T ss_dssp CHHHHH-HHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSC
T ss_pred cchHHH-HHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhc
Confidence 333 32 445666667777889999999999999999999999999999 599999999999999999987 4456653
Q ss_pred -cCCcEEecCcccC
Q 001380 277 -ASPSLIRKEIGSV 289 (1089)
Q Consensus 277 -~~~d~vi~dl~el 289 (1089)
..|+++++++.++
T Consensus 234 ~~~~~~v~~~~~el 247 (250)
T 2c4n_A 234 PFRPSWIYPSVAEI 247 (250)
T ss_dssp SSCCSEEESSGGGC
T ss_pred CCCCCEEECCHHHh
Confidence 6899999999887
No 207
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.75 E-value=1.8e-18 Score=186.60 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=115.7
Q ss_pred CCCCCCCCCCccccCCC-CCc--eeecccc-cCCCEEEEEEe-cCCCcchh-hhhhhHHHHHHHcCCCCE-EEEEEeCCC
Q 001380 424 RKTTPIVPEFPAKLDWL-NTA--PLQFRRD-LKGKVVVLDFW-TYCCINCM-HVLPDLEFLEKKYKDMPF-TVVGVHSAK 496 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~-~g~--~~~l~~~-~~gk~vll~Fw-a~wC~~C~-~~~p~l~~l~~~~~~~~v-~vi~v~~~~ 496 (1089)
..+|+++|+|++. ++ +|+ +++| ++ ++||++||+|| ++||++|+ .|+|.|++++++|+++++ .||+|+.
T Consensus 3 ~~~G~~aP~f~l~--~~~~g~~~~v~l-~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~-- 77 (241)
T 1nm3_A 3 SMEGKKVPQVTFR--TRQGDKWVDVTT-SELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSV-- 77 (241)
T ss_dssp CCTTSBCCCCEEE--EEETTEEEEEEH-HHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEES--
T ss_pred ccCCCCCCCeEEE--cccCCCceeecH-HHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEc--
Confidence 4689999999965 43 676 8999 88 89999999999 99999999 999999999999998899 9999985
Q ss_pred CCChhcHHHHHHHHHHcCCc-cceeecCChhHHHHhCCC-----------ceeEEEEECCCCcEEEEecCCCch------
Q 001380 497 FDNEKDLEAIRNAVLRYGIS-HPVVNDGDMNLWRELGVN-----------SWPTFAVVGPNGKLLAQLAGEGHR------ 558 (1089)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~-~~v~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~G~~~~------ 558 (1089)
++.+.+++|+++++++ ||++.|.+++++++||+. ..|++||| ++|+|++.+.|....
T Consensus 78 ----d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~ 152 (241)
T 1nm3_A 78 ----NDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKV 152 (241)
T ss_dssp ----SCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSS
T ss_pred ----CCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCcccee
Confidence 3577899999999997 999999999999999986 45999999 999999998886443
Q ss_pred hhHHHHHHH
Q 001380 559 KDLDDLVEA 567 (1089)
Q Consensus 559 ~~l~~~l~~ 567 (1089)
...+++++.
T Consensus 153 ~~~~~il~~ 161 (241)
T 1nm3_A 153 SDADTMLKY 161 (241)
T ss_dssp SSHHHHHHH
T ss_pred cCHHHHHHH
Confidence 345555543
No 208
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.75 E-value=4.8e-18 Score=172.47 Aligned_cols=141 Identities=18% Similarity=0.261 Sum_probs=109.7
Q ss_pred CCCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCc-chhhhhhhHHHHHHHcCC--CCEEEEEEeCCCCCCh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCI-NCMHVLPDLEFLEKKYKD--MPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~-~C~~~~p~l~~l~~~~~~--~~v~vi~v~~~~~~~~ 500 (1089)
..+|.++|+|+++ +.+|+++++ ++++||+|||+||++||+ +|..+++.|.++++++++ .++.+|+|+++ +..
T Consensus 6 ~P~~~~~PdF~L~--d~~G~~v~l-~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD--p~~ 80 (170)
T 4hde_A 6 KPLNWDLETFQFT--NQDGKPFGT-KDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD--PDL 80 (170)
T ss_dssp SCCCBCCCCCEEE--CTTSCEEEH-HHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC--TTT
T ss_pred cCCCCcCCCcEEE--CCCCCEEeH-HHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC--ccc
Confidence 4578899999965 559999999 999999999999999997 699999999999988864 36899999884 234
Q ss_pred hcHHHHHHHHHHcCCcc---ceeecCChh-HH----HHh----------CCCceeEEEEECCCCcEEEEecCCC--chhh
Q 001380 501 KDLEAIRNAVLRYGISH---PVVNDGDMN-LW----REL----------GVNSWPTFAVVGPNGKLLAQLAGEG--HRKD 560 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~~---~v~~d~~~~-l~----~~~----------~v~~~Pt~~lid~~G~i~~~~~G~~--~~~~ 560 (1089)
|+++.+++|+++++.++ ..+.+.+.+ +. ..| .+.+.|++||||++|+|+..+.|.. ..++
T Consensus 81 Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~ 160 (170)
T 4hde_A 81 DKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYED 160 (170)
T ss_dssp CCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHH
T ss_pred ccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHH
Confidence 78999999999998765 345554322 22 223 3445689999999999999987743 3456
Q ss_pred HHHHHHHHH
Q 001380 561 LDDLVEAAL 569 (1089)
Q Consensus 561 l~~~l~~~l 569 (1089)
+.+.|+.++
T Consensus 161 l~~~ik~Ll 169 (170)
T 4hde_A 161 IIRDMKRLA 169 (170)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666554
No 209
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=4.7e-16 Score=175.76 Aligned_cols=256 Identities=13% Similarity=0.128 Sum_probs=183.3
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
.....|.++++++ +|+||+++...++|.+++.++.....+... . ...|.+++++++|+ +|+++..
T Consensus 42 ~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~------------~~~~~~i~~~~dg~-l~v~~~~ 106 (333)
T 2dg1_A 42 KKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVS-H------------KANPAAIKIHKDGR-LFVCYLG 106 (333)
T ss_dssp SSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEEC-S------------SSSEEEEEECTTSC-EEEEECT
T ss_pred ccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeC-C------------CCCcceEEECCCCc-EEEEeCC
Confidence 3456788999996 788999999999999999875443333211 0 13689999999998 9999877
Q ss_pred C----CEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC------CcEEEEEECCC
Q 001380 678 N----HALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG------QHQIWEHSTVD 747 (1089)
Q Consensus 678 n----~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~------~~~I~~~~~~~ 747 (1089)
+ +.|+++|++++.+..+..... ....|++++++++| .+|+++.. .+.|+++++.+
T Consensus 107 ~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 107 DFKSTGGIFAATENGDNLQDIIEDLS--------------TAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp TSSSCCEEEEECTTSCSCEEEECSSS--------------SCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCCceEEEEeCCCCEEEEEEccCc--------------cCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCC
Confidence 6 799999999888765432110 02478999999987 89998875 57899999887
Q ss_pred CeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCC-C-CeEEEecCCCCCCCCccccC
Q 001380 748 GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT-G-GSRLLAGGDPIFPDNLFKFG 825 (1089)
Q Consensus 748 g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~-~-~~~~~~g~~~~~~~~l~~~g 825 (1089)
+.+..+.. .+..|.+++++++|+.||+++...++|++++.++ + ....+... ....+.
T Consensus 172 ~~~~~~~~---------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~------~~~~~~ 230 (333)
T 2dg1_A 172 RTVTPIIQ---------------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT------IPYYFT 230 (333)
T ss_dssp CCEEEEEE---------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE------EEEECC
T ss_pred CEEEEeec---------------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce------EEEecC
Confidence 77665531 2346889999999988999999889999999853 2 22221100 000000
Q ss_pred CCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCC-c
Q 001380 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG-N 904 (1089)
Q Consensus 826 ~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G-~ 904 (1089)
+ ...|.++++|++|++||++..+++|.++|+++..+.++..... ..+.+..|.+++++++| .
T Consensus 231 ---~------~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~--------~~g~~~~~~~~~~~~dg~~ 293 (333)
T 2dg1_A 231 ---G------HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGR--------DEGHMLRSTHPQFIPGTNQ 293 (333)
T ss_dssp ---S------SSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTG--------GGTCSCBCCEEEECTTSCE
T ss_pred ---C------CCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCC--------ccccccCcceEEECCCCCE
Confidence 0 1368999999999999999989999999998776666642210 01134579999998886 7
Q ss_pred EEEEECCC-----CEEEEEeCC
Q 001380 905 LFIADTNN-----NIIRYLDLN 921 (1089)
Q Consensus 905 lyVad~~n-----~~I~~~~~~ 921 (1089)
|||+.... +.|.++++.
T Consensus 294 L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 294 LIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEEEEECGGGTCCEEEEEEECS
T ss_pred EEEEeCccCCCCCceEEEEecc
Confidence 99987653 345555543
No 210
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.75 E-value=3.6e-18 Score=176.58 Aligned_cols=148 Identities=18% Similarity=0.166 Sum_probs=115.9
Q ss_pred cCCCCCCCCCCccc-cCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh
Q 001380 423 NRKTTPIVPEFPAK-LDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~-~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~ 500 (1089)
..++|++||||+++ +.+-++++++| ++++||++||+|| +.||+.|..|++.|++++++|++.|++|||||+
T Consensus 22 ~~~VG~~APdF~l~a~~d~~~~~vsL-sd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~------ 94 (216)
T 3sbc_A 22 VAQVQKQAPTFKKTAVVDGVFDEVSL-DKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFAST------ 94 (216)
T ss_dssp CCCTTSBCCCCCEEEEETTEEEEECG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEES------
T ss_pred hhhcCCcCCCCCCcceECCCCcEEeh-HHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeec------
Confidence 35799999999965 22335678999 9999999999999 899999999999999999999999999999987
Q ss_pred hcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCC----CchhhHHH
Q 001380 501 KDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGE----GHRKDLDD 563 (1089)
Q Consensus 501 ~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~----~~~~~l~~ 563 (1089)
++....++|.+.. +++||++.|.++++++.|||. ..+.+||||++|+|++..... .+.+++.+
T Consensus 95 Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr 174 (216)
T 3sbc_A 95 DSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALR 174 (216)
T ss_dssp SCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHH
T ss_pred CchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHH
Confidence 4555555555443 578999999999999999983 468999999999999874332 24455555
Q ss_pred HHHHHHHHhcccccc
Q 001380 564 LVEAALLFYGKKKLL 578 (1089)
Q Consensus 564 ~l~~~l~~~~~~~~l 578 (1089)
.|+. |+...+.|..
T Consensus 175 ~l~A-lQ~~~~~~~~ 188 (216)
T 3sbc_A 175 LVEA-FQWTDKNGTV 188 (216)
T ss_dssp HHHH-HHHHHHHCCB
T ss_pred HHHH-hhhHhhcCCC
Confidence 5544 3333333443
No 211
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=99.75 E-value=2.2e-18 Score=192.88 Aligned_cols=173 Identities=19% Similarity=0.191 Sum_probs=123.6
Q ss_pred CCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 001380 76 WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYL 155 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (1089)
++++++|+||+||||++++.. .++.+.+|+.....++......+...+...+............+....+ .
T Consensus 105 ~~~~kaviFDlDGTLid~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~----~ 175 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV-----DEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAV----C 175 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHH----H
T ss_pred CCCCCEEEEcCCCCccCCccH-----HHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHH----H
Confidence 467899999999999998753 5555666664333333222221111111111111111111222222222 1
Q ss_pred HHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcC----------CccCCCCCH
Q 001380 156 DKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSAD----------AFENLKPAP 225 (1089)
Q Consensus 156 ~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~----------~~~~~KP~~ 225 (1089)
+. ..++||+.++|+.|+++|++++|+||+....++.+++++|+. .+|+.++..+ +....||++
T Consensus 176 ~~------~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~-~~f~~~l~~~dg~~tg~i~~~~~~~kpkp 248 (317)
T 4eze_A 176 DR------MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD-YAFSNTVEIRDNVLTDNITLPIMNAANKK 248 (317)
T ss_dssp HT------CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS-EEEEECEEEETTEEEEEECSSCCCHHHHH
T ss_pred hC------CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC-eEEEEEEEeeCCeeeeeEecccCCCCCCH
Confidence 11 268999999999999999999999999999999999999997 8888776532 344569999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEE
Q 001380 226 DIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIA 264 (1089)
Q Consensus 226 ~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~ 264 (1089)
++|..+++++|+++++|+||||+.+|+.+|+++|+.+++
T Consensus 249 ~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 249 QTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 999999999999999999999999999999999987665
No 212
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=99.74 E-value=3.2e-19 Score=195.31 Aligned_cols=208 Identities=13% Similarity=0.154 Sum_probs=140.5
Q ss_pred CCceEEEEecCCcccCCchHHHHHHH--HHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCC-----HH-HHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAV--DVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFD-----SE-AAKK 148 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~ 148 (1089)
.++++|+||+||||+++...+..+.. +.+++.|+.+ ..++...+.+...+...+....++.... .. ....
T Consensus 3 ~~~k~v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~--~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 80 (264)
T 1yv9_A 3 LDYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPF--LFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATID 80 (264)
T ss_dssp CSCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCE--EEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHHHH
T ss_pred ccCCEEEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeE--EEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHHHH
Confidence 45899999999999998766654433 3455566553 2233334444555555444433432210 00 0000
Q ss_pred -----------------HHHHHHHHH------------hcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHh--HHH
Q 001380 149 -----------------RFFEIYLDK------------YAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIK--VDA 197 (1089)
Q Consensus 149 -----------------~~~~~~~~~------------~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~--~~~ 197 (1089)
.+.+.+.+. +.......++||+.++++.|+ +|+++ |+||..... ...
T Consensus 81 ~~~~~~~~~~~~~~g~~~l~~~l~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~ 158 (264)
T 1yv9_A 81 YMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG 158 (264)
T ss_dssp HHHHHCCCSEEEEESCHHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE
T ss_pred HHHhhCCCCEEEEEeCHHHHHHHHHcCCcccCCCCCEEEEECCCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC
Confidence 111111111 001123467899999999997 88997 999976632 111
Q ss_pred -HHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHH
Q 001380 198 -NLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERL 274 (1089)
Q Consensus 198 -~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l 274 (1089)
.++..++. .+|+.++++++...+||+|++|+.+++++|++|++|+||||++ +|+.+|+++||.+++|.+|. ..+++
T Consensus 159 ~~~~~~~l~-~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l 237 (264)
T 1yv9_A 159 LLPGAGSVV-TFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAV 237 (264)
T ss_dssp EEECHHHHH-HHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSST
T ss_pred cccCCcHHH-HHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHH
Confidence 12222343 6688888888888999999999999999999999999999995 99999999999999999987 44455
Q ss_pred hhc--CCcEEecCcccC
Q 001380 275 KEA--SPSLIRKEIGSV 289 (1089)
Q Consensus 275 ~~~--~~d~vi~dl~el 289 (1089)
.+. .|+++++++.++
T Consensus 238 ~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 238 PTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp TTCSSCCSEEESSGGGC
T ss_pred HhcCCCCCEEEecHHHH
Confidence 543 799999999888
No 213
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.73 E-value=6.9e-18 Score=180.29 Aligned_cols=141 Identities=14% Similarity=0.157 Sum_probs=114.9
Q ss_pred CCCCCCCCCCccccCCCCCceeeccccc--CCCEE-EEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCCh
Q 001380 424 RKTTPIVPEFPAKLDWLNTAPLQFRRDL--KGKVV-VLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 424 ~~~g~~~P~f~~~~~~~~g~~~~l~~~~--~gk~v-ll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~ 500 (1089)
..+|+++|+|++.. .+| .+++.+++ +||++ |++||++||++|..+++.|++++++|+++++.||+||+ +..
T Consensus 5 ~~iG~~aPdF~l~~--~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~---Ds~ 78 (249)
T 3a2v_A 5 PLIGERFPEMEVTT--DHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSV---DSV 78 (249)
T ss_dssp CCTTSBCCCEEEEE--TTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEES---SCH
T ss_pred CCCCCCCCCeEEEc--CCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEEC---CCH
Confidence 46899999999654 477 68773456 99975 55789999999999999999999999988999999997 344
Q ss_pred hcHHHHHHHHHH---cCCccceeecCChhHHHHhCCC-------ceeEEEEECCCCcEEEEecCCC----chhhHHHHHH
Q 001380 501 KDLEAIRNAVLR---YGISHPVVNDGDMNLWRELGVN-------SWPTFAVVGPNGKLLAQLAGEG----HRKDLDDLVE 566 (1089)
Q Consensus 501 ~~~~~~~~~~~~---~~~~~~v~~d~~~~l~~~~~v~-------~~Pt~~lid~~G~i~~~~~G~~----~~~~l~~~l~ 566 (1089)
.+..+|.+.+++ ++++||++.|.+.++++.||+. ++|++||||++|+|++.+.|.. +.+++.+.|+
T Consensus 79 ~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~ 158 (249)
T 3a2v_A 79 FSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVK 158 (249)
T ss_dssp HHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHH
Confidence 455555554443 5789999999999999999997 8999999999999999977654 4677777777
Q ss_pred HHHH
Q 001380 567 AALL 570 (1089)
Q Consensus 567 ~~l~ 570 (1089)
.+..
T Consensus 159 alq~ 162 (249)
T 3a2v_A 159 ALKL 162 (249)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
No 214
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.73 E-value=1.5e-16 Score=181.53 Aligned_cols=270 Identities=16% Similarity=0.228 Sum_probs=165.4
Q ss_pred CCCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeC---CCEE
Q 001380 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK---KNLL 671 (1089)
Q Consensus 595 ~~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~---g~~l 671 (1089)
.+++.|..|.++++++ +|+|||++.. ++|.+++ +|+.. .+.... -..+ ....|.||+++|+ +..|
T Consensus 25 ~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~i~-~g~~~-~~~~~~--v~~~------g~~~p~gia~~pdf~~~g~l 92 (352)
T 2ism_A 25 EVVGGLEVPWALAFLP-DGGMLIAERP-GRIRLFR-EGRLS-TYAELS--VYHR------GESGLLGLALHPRFPQEPYV 92 (352)
T ss_dssp EEECCCSCEEEEEECT-TSCEEEEETT-TEEEEEE-TTEEE-EEEECC--CCCS------TTCSEEEEEECTTTTTSCEE
T ss_pred EEECCCCCceEEEEcC-CCeEEEEeCC-CeEEEEE-CCCcc-Eeecce--Eeec------CCCCceeEEECCCCCCCCEE
Confidence 4567899999999997 8899999986 8999999 77633 332211 0111 1457999999998 6679
Q ss_pred EEEECCC-----CEEEEEECCCCeE---EEEec-CCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC------
Q 001380 672 YVADTEN-----HALREIDFVNDTV---RTLAG-NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG------ 736 (1089)
Q Consensus 672 yVaD~~n-----~~I~~~d~~~g~v---~~~ag-~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~------ 736 (1089)
||+++.+ ++|.+++.+++.+ +++.. .... ......|.+|+++|+| .|||++..
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~-----------~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~ 160 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPAR-----------PHGLHSGGRIAFGPDG-MLYVTTGEVYEREL 160 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCC-----------TTCCCCCCCEEECTTS-CEEEECCCTTCGGG
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCC-----------CCCCcCCceEEECCCC-CEEEEECCCCCCcc
Confidence 9999865 8999999876532 22221 1100 0123578999999988 89999742
Q ss_pred -------CcEEEEEECCCCeEEEEeCCCccccCCC--CCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCe
Q 001380 737 -------QHQIWEHSTVDGVTRAFSGDGYERNLNG--SSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS 807 (1089)
Q Consensus 737 -------~~~I~~~~~~~g~~~~~~g~g~~~~~~g--~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~ 807 (1089)
.++|+++++++.. ..++. .....+ ......++.+|.||+++++++.||++|.+.+.++. .....+
T Consensus 161 ~~d~~~~~g~I~ri~~dG~~---p~~np-f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~--~~~dei 234 (352)
T 2ism_A 161 AQDLASLGGKILRLTPEGEP---APGNP-FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQG--YGHDEV 234 (352)
T ss_dssp GGCTTCSSSEEEEECTTSSB---CTTCT-TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC--------CCCEE
T ss_pred ccCCCCCceEEEEEcCCCCC---CCCCc-ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCC--CCCeEE
Confidence 2578888775421 00000 000000 00112456789999999955599999998877432 111222
Q ss_pred EEEe-cCCCCCCCCccccCCC--CCc-ccc---ccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCe-------EEEE
Q 001380 808 RLLA-GGDPIFPDNLFKFGDR--DGM-GSE---VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNR-------VSTL 873 (1089)
Q Consensus 808 ~~~~-g~~~~~~~~l~~~g~~--dg~-~~~---~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~-------v~t~ 873 (1089)
..+. |+...++. ..|.. .+. ... .....|.|+++ .+|++||++..+++|.+++.+++. ...+
T Consensus 235 ~~i~~G~nyGwp~---~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 310 (352)
T 2ism_A 235 NLIVPGGNYGWPR---VVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETA 310 (352)
T ss_dssp EEECTTCBCCTTT---CCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEeccCCcCCCCc---ccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchhee
Confidence 2222 22111111 01110 000 000 11236899999 589999999999999999875332 1222
Q ss_pred eccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCC
Q 001380 874 AGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912 (1089)
Q Consensus 874 ~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n 912 (1089)
. ..+..|.+|+++++|.|||++.+.
T Consensus 311 ~--------------~~~~rp~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 311 L--------------SGFGRLREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp E--------------ESSCCEEEEEECTTSCEEEEECST
T ss_pred c--------------ccCCCeeEEEECCCCcEEEEEeCC
Confidence 1 135679999999999999999763
No 215
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.73 E-value=4.8e-16 Score=177.22 Aligned_cols=274 Identities=15% Similarity=0.186 Sum_probs=174.2
Q ss_pred CCCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeC---CCEE
Q 001380 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK---KNLL 671 (1089)
Q Consensus 595 ~~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~---g~~l 671 (1089)
.+++.|..|.+|++++ +|+|||++.. ++|.+++.+|+ ..+..... +.+ ....|.||+++|+ +..|
T Consensus 23 ~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~~d~~G~--~~~~~~~v--~~~------g~~g~~gia~~pdf~~~g~l 90 (354)
T 3a9g_A 23 EVASDLEVPWSIAPLG-GGRYLVTERP-GRLVLISPSGK--KLVASFDV--ANV------GEAGLLGLALHPEFPKKSWV 90 (354)
T ss_dssp EEECSCSCEEEEEEEE-TTEEEEEETT-TEEEEECSSCE--EEEEECCC--CCS------TTCSEEEEEECTTTTTSCEE
T ss_pred EEeCCCCCCeEEEEcC-CCeEEEEeCC-CEEEEEeCCCc--eEeeccce--eec------CCCceeeEEeCCCCCcCCEE
Confidence 4567899999999998 8999999987 99999998887 33332110 001 1347999999997 5669
Q ss_pred EEEECC---C----CEEEEEECCCC--e---EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC---
Q 001380 672 YVADTE---N----HALREIDFVND--T---VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG--- 736 (1089)
Q Consensus 672 yVaD~~---n----~~I~~~d~~~g--~---v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~--- 736 (1089)
||+++. + ++|.+++.+++ . .+++.. +.. ......|.+|+++|+| .|||+...
T Consensus 91 yv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~-~~~-----------~~~~h~~~~l~~~pDG-~Lyvt~G~~~~ 157 (354)
T 3a9g_A 91 YLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLID-GIP-----------GAYIHNGGRIRFGPDG-MLYITTGDAAD 157 (354)
T ss_dssp EEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEE-EEE-----------CCSSCCCCCEEECTTS-CEEEECCCTTC
T ss_pred EEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEE-cCC-----------CCCCcCCceEEECCCC-cEEEEECCCCC
Confidence 999874 3 78999998765 1 222221 000 0113478899999988 89999642
Q ss_pred ----------CcEEEEEECCCCeEEEEeCCCccccCC-CCCCCCccccCCceEEEcCCCCEEEEEeCCCCe---EEEEEc
Q 001380 737 ----------QHQIWEHSTVDGVTRAFSGDGYERNLN-GSSSLNTSFAQPSGISLSPDFMEIYVADSESSS---IRALNL 802 (1089)
Q Consensus 737 ----------~~~I~~~~~~~g~~~~~~g~g~~~~~~-g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~---I~~~~~ 802 (1089)
.++|+++++++.. .. .+.. .......++.+|.||+++++.+.||++|.+.+. |.++..
T Consensus 158 ~~~~~d~~~~~G~I~ri~~dG~~----p~----~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 158 PRLAQDLSSLAGKILRVDEEGRP----PA----DNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp GGGGTCTTCCSSEEEEECTTSCC----CT----TSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred CccccCCCCCCeEEEEEcCCCCC----CC----CCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 2578888765421 00 0000 001112457899999999954599999988765 443322
Q ss_pred CCCCeEEEecCCCCCCCCccccCCC--CCc-cccc----cccCceEEEE-------ccCCcEEEEeCCCCEEEEEeCCCC
Q 001380 803 KTGGSRLLAGGDPIFPDNLFKFGDR--DGM-GSEV----LLQHPLGVYC-------AKNGQIYVADSYNHKIKKLDPASN 868 (1089)
Q Consensus 803 ~~~~~~~~~g~~~~~~~~l~~~g~~--dg~-~~~~----~l~~P~gva~-------~~~G~lyVaD~~n~~I~~~d~~~~ 868 (1089)
|+...++. ..+.. .+. .... .-..|.|+++ +.+|++||++...++|.+++.++.
T Consensus 230 ---------G~nyGwp~---~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 230 ---------GGNYGWPL---ATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp ---------TCBCCTTT---CCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred ---------CCcCCCCc---ccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 11111111 00100 000 0000 1235999999 468999999999999999988642
Q ss_pred -eEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECC-CC---------EEEEEeCCCC
Q 001380 869 -RVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN-NN---------IIRYLDLNKE 923 (1089)
Q Consensus 869 -~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~-n~---------~I~~~~~~~~ 923 (1089)
.+......- ...+..|.+|+++++|.|||++.+ ++ +|.++.+.+.
T Consensus 298 g~~~~~~~~~----------~~~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g~ 353 (354)
T 3a9g_A 298 MEVRKISTFF----------KNVFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQH 353 (354)
T ss_dssp GCEEEEEEEC----------TTTSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETTC
T ss_pred Ccccceeeec----------cCCCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCCC
Confidence 332111000 013567999999999999999974 44 8888887654
No 216
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.73 E-value=2.4e-16 Score=176.53 Aligned_cols=204 Identities=13% Similarity=0.123 Sum_probs=151.7
Q ss_pred CCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC
Q 001380 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG 736 (1089)
Q Consensus 657 ~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~ 736 (1089)
..|.|++++++|+ |||+|..+++|+++|++++....+. .+ ..|.+|+++++| .|||++.+
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~~~~~~~-~~-----------------~~p~gia~~~dG-~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDGNQQIHAT-VE-----------------GKVSGLAFTSNG-DLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTCCEEEEEE-CS-----------------SEEEEEEECTTS-CEEEEEEC
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCCceEEEEe-CC-----------------CCceeEEEcCCC-cEEEEecc
Confidence 3789999999988 9999999999999999876544432 11 269999999988 59999976
Q ss_pred C--cEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEE-ecC
Q 001380 737 Q--HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLL-AGG 813 (1089)
Q Consensus 737 ~--~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~-~g~ 813 (1089)
+ .+|++++..++.+..+.... ....|.|+++.+++ .+|++|+.+++|+++++.++..++. ..+
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~-------------~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~ 157 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLP-------------DAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHP 157 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECT-------------TCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECG
T ss_pred CCcceEEEEcCCCCeEEEEEeCC-------------CccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECC
Confidence 4 36999998888887765321 12347888887665 9999999999999999875432221 110
Q ss_pred CCCCCCCccccCCCCCccccccccCceEEEEccCC-cEEEEeCCCCEEEEEeCCC-CeE---EEEeccCCCCCCCCcccc
Q 001380 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPAS-NRV---STLAGIGKAGFKDGAALA 888 (1089)
Q Consensus 814 ~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G-~lyVaD~~n~~I~~~d~~~-~~v---~t~~g~g~~g~~~g~~~~ 888 (1089)
. ..... ....+..|.|| +++| .+||+|+.+++|.+|+.++ +.+ ..+
T Consensus 158 ~-------~~~~~-----~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~--------------- 208 (306)
T 2p4o_A 158 M-------LARSN-----SESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF--------------- 208 (306)
T ss_dssp G-------GSCSS-----TTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEE---------------
T ss_pred c-------ccccc-----ccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEE---------------
Confidence 0 00000 01236689998 5555 7999999999999999864 322 111
Q ss_pred cccCCCceEEEccCCcEEEEECCCCEEEEEeCCCC
Q 001380 889 AQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 889 ~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
..+..|.||++|++|+|||++..+++|.+|++++.
T Consensus 209 ~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~ 243 (306)
T 2p4o_A 209 VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS 243 (306)
T ss_dssp EESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC
T ss_pred eccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCC
Confidence 13467999999999999999999999999998764
No 217
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.73 E-value=1.9e-18 Score=170.97 Aligned_cols=120 Identities=18% Similarity=0.257 Sum_probs=104.5
Q ss_pred CCCCCCCC-CccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC-CCEEEEEEeCCCCCChhc
Q 001380 425 KTTPIVPE-FPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD-MPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 425 ~~g~~~P~-f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~v~vi~v~~~~~~~~~~ 502 (1089)
..++.+|+ |++. +++| .+++ ++++||++||+||++||++|+.++|.|++++++|++ .++.+++|++ +++
T Consensus 3 ~~~~~~P~~f~l~--~~~g-~~~l-~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~-----d~~ 73 (146)
T 1o8x_A 3 GLDKYLPGIEKLR--RGDG-EVEV-KSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTW-----DEE 73 (146)
T ss_dssp CGGGTSTTCCEEE--ETTE-EEEG-GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEC-----CCS
T ss_pred chHhhCCCceEEE--cCCC-CCcH-HHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeC-----CCC
Confidence 35788999 8854 5699 9999 899999999999999999999999999999999984 6899999976 457
Q ss_pred HHHHHHHHHHcCC-ccceee-cCChhHHHHhCCCceeEEEEEC-CCCcEEEEec
Q 001380 503 LEAIRNAVLRYGI-SHPVVN-DGDMNLWRELGVNSWPTFAVVG-PNGKLLAQLA 553 (1089)
Q Consensus 503 ~~~~~~~~~~~~~-~~~v~~-d~~~~l~~~~~v~~~Pt~~lid-~~G~i~~~~~ 553 (1089)
.+.+++++++++. .+++.. |.+.++++.|+|.++|+++||| ++|+++.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 74 EDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp HHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecc
Confidence 7889999999874 466654 6678899999999999999999 9999998743
No 218
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.73 E-value=7.1e-19 Score=177.86 Aligned_cols=122 Identities=18% Similarity=0.202 Sum_probs=104.0
Q ss_pred cCCCCCCCCCC-ccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC-CCEEEEEEeCCCCCCh
Q 001380 423 NRKTTPIVPEF-PAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD-MPFTVVGVHSAKFDNE 500 (1089)
Q Consensus 423 ~~~~g~~~P~f-~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~v~vi~v~~~~~~~~ 500 (1089)
...+|+++|+| ++ .+.+| .+++ ++++||++||+||++||++|+.++|.|++++++|++ .++.||+|++ +
T Consensus 21 ~~~vG~~~P~f~~l--~~~~g-~v~l-~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~-----d 91 (165)
T 3s9f_A 21 MSGVAKHLGEALKL--RKQAD-TADM-DSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASW-----D 91 (165)
T ss_dssp -CHHHHHHHHTSCE--EETTE-EECS-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEC-----C
T ss_pred hhhhcccCCcceee--ecCCC-cccH-HHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEec-----C
Confidence 34578889998 74 45688 9999 899999999999999999999999999999999986 6899999976 4
Q ss_pred hcHHHHHHHHHHcCCc-cceeecCC-hhHHHHhCCCceeEEEEECCC-CcEEEEec
Q 001380 501 KDLEAIRNAVLRYGIS-HPVVNDGD-MNLWRELGVNSWPTFAVVGPN-GKLLAQLA 553 (1089)
Q Consensus 501 ~~~~~~~~~~~~~~~~-~~v~~d~~-~~l~~~~~v~~~Pt~~lid~~-G~i~~~~~ 553 (1089)
++.+.+++++++++.. +++..+.. .++++.|+|.++|+++|||++ |+|+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 92 EEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp CSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred CCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEeccc
Confidence 6778899999988753 45554433 789999999999999999998 99998743
No 219
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.73 E-value=5.1e-15 Score=168.03 Aligned_cols=240 Identities=14% Similarity=0.190 Sum_probs=181.4
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC-CCC
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT-ENH 679 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~-~n~ 679 (1089)
.|.++++++.++.+|+++...+.|.++|.+ |+.+..+....... ........|.+++++++|+.+|+++. .++
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 164 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR-----TEEVRPLQPRELVADDATNTVYISGIGKES 164 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCC-----CSSCCCCEEEEEEEETTTTEEEEEEESSSC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc-----ccccCCCCCceEEECCCCCEEEEEecCCCc
Confidence 478899998667799999999999999986 77777665531110 00112235899999999999999994 578
Q ss_pred EEEEEECCCCeEEEEec-CCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCc
Q 001380 680 ALREIDFVNDTVRTLAG-NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758 (1089)
Q Consensus 680 ~I~~~d~~~g~v~~~ag-~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~ 758 (1089)
.|+++|+.++.+..... .+ ..|.+++++|+|+.+|+++. ++.|+.+|..++........+.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~ 226 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTG-----------------KMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLD 226 (353)
T ss_dssp EEEEEETTTTEEEEEECCCC-----------------TTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCC
T ss_pred eEEEEcCCCCceEEEecCCC-----------------CccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCC
Confidence 89999998887665542 22 25889999999999999986 6899999999887654432210
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccC
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~ 838 (1089)
......|.+++++++|+.+|+++...+.|..++..++....... +..
T Consensus 227 ----------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-----------------------~~~ 273 (353)
T 3vgz_A 227 ----------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA-----------------------APE 273 (353)
T ss_dssp ----------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE-----------------------CSS
T ss_pred ----------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE-----------------------cCC
Confidence 01123578999999999999999999999999998766533221 124
Q ss_pred ceEEEEccCCc-EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECC
Q 001380 839 PLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTN 911 (1089)
Q Consensus 839 P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~ 911 (1089)
|.+++++++|+ +|+++..++.|.++|..++.+......+ ..|.+++++++|+ |||+...
T Consensus 274 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 274 SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP--------------THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC--------------SEEEEEEECTTSCEEEEEEEC
T ss_pred CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC--------------CCCCeEEEcCCCCEEEEEEcc
Confidence 56799999996 9999999999999999887765443221 2489999999997 9998765
No 220
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.73 E-value=1.8e-15 Score=171.97 Aligned_cols=279 Identities=15% Similarity=0.164 Sum_probs=186.7
Q ss_pred CCCCceEEEeecCCeEEEEeCC--CCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 600 LKFPGKLAIDILNNRLFISDSN--HNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd~~--~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
...|..+++++ +|+||+++.. ++.|.+++.++.....+..... ....|.+++++|+|+.||+++..
T Consensus 39 ~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-----------~~~~p~~~a~spdg~~l~~~~~~ 106 (347)
T 3hfq_A 39 TQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-----------PGTPPAYVAVDEARQLVYSANYH 106 (347)
T ss_dssp CSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE-----------ESCCCSEEEEETTTTEEEEEETT
T ss_pred cCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeec-----------CCCCCEEEEECCCCCEEEEEeCC
Confidence 36788999998 7779988863 6789999886544333322100 12378999999999999999988
Q ss_pred CCEEEEEECC-CCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECC-CCeEEEEeC
Q 001380 678 NHALREIDFV-NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV-DGVTRAFSG 755 (1089)
Q Consensus 678 n~~I~~~d~~-~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~-~g~~~~~~g 755 (1089)
++.|+.++.+ ++....+......+. .+...+....|++++++|+|+ +|+++.+.+.|+.|+.. ++.+.....
T Consensus 107 ~~~v~v~~~~~~g~~~~~~~~~~~~~-----~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 107 KGTAEVMKIAADGALTLTDTVQHSGH-----GPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCCC-----CSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEEeCCCCCeeecceeecCCC-----CCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeee
Confidence 8999999984 455444432111110 111223345789999999997 99999999999999987 565544321
Q ss_pred CCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCC--CCeEEEecCCCCCCCCccccCCCCCcccc
Q 001380 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT--GGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833 (1089)
Q Consensus 756 ~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~--~~~~~~~g~~~~~~~~l~~~g~~dg~~~~ 833 (1089)
... ..-..|.+++++|+|+.||+++...+.|+.++.+. +....+..... .+ .+ .
T Consensus 181 ~~~-----------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~-~~---------~~---~ 236 (347)
T 3hfq_A 181 LTM-----------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT-IP---------AD---Y 236 (347)
T ss_dssp EEC-----------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES-SC---------TT---C
T ss_pred EEc-----------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee-cC---------CC---C
Confidence 000 01125789999999988999999999998888763 43322211000 00 00 0
Q ss_pred ccccCceEEEEccCCc-EEEEeCCCCEEEEEeCC-CCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEEC
Q 001380 834 VLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPA-SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADT 910 (1089)
Q Consensus 834 ~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~-~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~ 910 (1089)
.....|.+++++++|+ |||++..++.|.+++.+ ++.+..+..... .-..|.+++++++|+ ||+++.
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-----------~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-----------EGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-----------SSSCCCEEEECTTSSEEEEEET
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-----------CCCCcCeEEECCCCCEEEEEEc
Confidence 0124589999999996 89999999999999864 334433322100 124599999999996 999999
Q ss_pred CCCEEEEEeCCCCCceEEEEe
Q 001380 911 NNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 911 ~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
.+++|.+++.+..+..+..+.
T Consensus 306 ~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 306 NTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp TTTEEEEEEECTTTCCEEEEE
T ss_pred CCCcEEEEEEeCCCCeEEecc
Confidence 999999995554322445443
No 221
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.73 E-value=1.4e-17 Score=172.52 Aligned_cols=138 Identities=20% Similarity=0.263 Sum_probs=114.1
Q ss_pred cCCCCCCCCCCccc--cCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCC
Q 001380 423 NRKTTPIVPEFPAK--LDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDN 499 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~--~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~ 499 (1089)
..++|++||+|++. +.+.+|++++| ++++||+|||+|| +.||+.|..|+..+++++++|++.+++|||||+
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsL-sd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~----- 98 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISL-SSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSI----- 98 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEG-GGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEES-----
T ss_pred ccccCCcCCCCcccccccCCCCcEEeh-HHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeC-----
Confidence 45799999999853 44557889999 9999999999999 899999999999999999999999999999996
Q ss_pred hhcHHHHHHHHHHc-------CCccceeecCChhHHHHhCCC------ceeEEEEECCCCcEEEEecCC----CchhhHH
Q 001380 500 EKDLEAIRNAVLRY-------GISHPVVNDGDMNLWRELGVN------SWPTFAVVGPNGKLLAQLAGE----GHRKDLD 562 (1089)
Q Consensus 500 ~~~~~~~~~~~~~~-------~~~~~v~~d~~~~l~~~~~v~------~~Pt~~lid~~G~i~~~~~G~----~~~~~l~ 562 (1089)
|+....++|.++. +++||++.|.+++++++|||. ....+||||++|+|++.+... .+.+++.
T Consensus 99 -Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvL 177 (219)
T 3tue_A 99 -DSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVL 177 (219)
T ss_dssp -SCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHH
T ss_pred -CchhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHH
Confidence 5666666776653 688999999999999999983 346899999999999875322 2445555
Q ss_pred HHHHH
Q 001380 563 DLVEA 567 (1089)
Q Consensus 563 ~~l~~ 567 (1089)
+.|+.
T Consensus 178 r~l~a 182 (219)
T 3tue_A 178 RLLEA 182 (219)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 222
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.72 E-value=6e-18 Score=166.74 Aligned_cols=119 Identities=19% Similarity=0.230 Sum_probs=102.8
Q ss_pred CCCCCCCCC-ccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcC-CCCEEEEEEeCCCCCChhc
Q 001380 425 KTTPIVPEF-PAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKD 502 (1089)
Q Consensus 425 ~~g~~~P~f-~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~-~~~v~vi~v~~~~~~~~~~ 502 (1089)
.+|+.+|+| ++ .+.+| .+++ ++++||++||+||++||++|+.++|.|++++++|+ +.++.+++|++ +++
T Consensus 3 ~~g~~~p~~~~l--~~~~g-~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~-----d~~ 73 (144)
T 1o73_A 3 GLAKYLPGATNL--LSKSG-EVSL-GSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISW-----DEN 73 (144)
T ss_dssp GGGGTSCTTCCB--BCTTS-CBCS-GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEC-----CSS
T ss_pred chhhhCccceEe--ecCCC-cCcH-HHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeC-----CCC
Confidence 468899997 85 45699 9999 89999999999999999999999999999999998 46899999976 456
Q ss_pred HHHHHHHHHHcCC-ccceee-cCChhHHHHhCCCceeEEEEEC-CCCcEEEEe
Q 001380 503 LEAIRNAVLRYGI-SHPVVN-DGDMNLWRELGVNSWPTFAVVG-PNGKLLAQL 552 (1089)
Q Consensus 503 ~~~~~~~~~~~~~-~~~v~~-d~~~~l~~~~~v~~~Pt~~lid-~~G~i~~~~ 552 (1089)
.+.+++++++++. .+++.. |...++++.|+|.++|++++|| ++|+++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 74 ESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEecc
Confidence 7889999999874 345543 5567899999999999999999 899999764
No 223
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=99.72 E-value=9.2e-19 Score=190.85 Aligned_cols=208 Identities=17% Similarity=0.144 Sum_probs=141.2
Q ss_pred CCCceEEEEecCCcccCCchHHHHHHH--HHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCH-----HHHHH
Q 001380 76 WGKVSAVLFDMDGVLCNSEEPSRRAAV--DVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDS-----EAAKK 148 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d~~~~~~~a~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 148 (1089)
++++|+|+||+||||+++...+..++. +.+++.|+.. ...+...+.....+...+.. .+...... .....
T Consensus 4 ~~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~--~~~t~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~ 80 (259)
T 2ho4_A 4 RRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMV--RFVTNTTKETKKDLLERLKK-LEFEISEDEIFTSLTAAR 80 (259)
T ss_dssp --CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEE--EEEECCSSCCHHHHHHHHHH-TTCCCCGGGEEEHHHHHH
T ss_pred hhhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeE--EEEeCCCCcCHHHHHHHHHH-cCCCccHHHeecHHHHHH
Confidence 346899999999999998876544443 4555667653 22333445666666655543 34432110 01111
Q ss_pred HHHHHH------------HHHhcCC-------------CCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCC
Q 001380 149 RFFEIY------------LDKYAKP-------------NSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAG 203 (1089)
Q Consensus 149 ~~~~~~------------~~~~~~~-------------~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~g 203 (1089)
.+.... .+.+... ....+++++.++++.|+ +|+++ ++||.........+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~ 158 (259)
T 2ho4_A 81 NLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEHFHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALG 158 (259)
T ss_dssp HHHHHHTCCEEEESCGGGGGGGTTCCCSSCCEEEECCCGGGCBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEEC
T ss_pred HHHHHcCCeEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCCCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccC
Confidence 111110 0000000 01136899999999999 89999 999987666555566677
Q ss_pred CCCCCcc---EEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHHh--h
Q 001380 204 LPVSMFD---AIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERLK--E 276 (1089)
Q Consensus 204 l~~~~fd---~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l~--~ 276 (1089)
+. .+|+ .++++++...+||+|.+|+.+++++|++|++|+||||+. +|+.+|+++|+++++|.+|. ...+.. .
T Consensus 159 ~~-~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ 237 (259)
T 2ho4_A 159 PG-PFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKIN 237 (259)
T ss_dssp SH-HHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSS
T ss_pred Cc-HHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccC
Confidence 75 6776 566778888899999999999999999999999999999 99999999999999999985 333322 4
Q ss_pred cCCcEEecCcccC
Q 001380 277 ASPSLIRKEIGSV 289 (1089)
Q Consensus 277 ~~~d~vi~dl~el 289 (1089)
..|+++++++.++
T Consensus 238 ~~~~~~~~~l~~l 250 (259)
T 2ho4_A 238 PPPYLTCESFPHA 250 (259)
T ss_dssp SCCSEEESCHHHH
T ss_pred CCCCEEECCHHHH
Confidence 6899999999888
No 224
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=99.71 E-value=1.4e-17 Score=174.91 Aligned_cols=185 Identities=13% Similarity=0.167 Sum_probs=133.4
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCCC------CHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHH
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEV------TVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFE 152 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (1089)
+++|+||+||||++ .++.++++++|++. ....+..+.+.. ...+.. .+. ..+ .+.+
T Consensus 2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~---~~~----~~~~ 63 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQR----LRILDE-HGL---KLG----DIQE 63 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHH----HHHHHH-TTC---CHH----HHHH
T ss_pred CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHH----HHHHHH-CCC---CHH----HHHH
Confidence 68999999999999 46788888888763 111122121111 111111 111 111 1111
Q ss_pred HHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCc-cEEEEcCCcc--C-CCCCHHHH
Q 001380 153 IYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMF-DAIVSADAFE--N-LKPAPDIF 228 (1089)
Q Consensus 153 ~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~f-d~i~~~~~~~--~-~KP~~~~~ 228 (1089)
.+ . ...++||+.++|+.|+++ ++++|+||.....++..++++|+. .+| +.++++++.. . .||+|.++
T Consensus 64 ----~~-~--~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~~~~~~p~p~~~ 134 (206)
T 1rku_A 64 ----VI-A--TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFP-TLLCHKLEIDDSDRVVGYQLRQKDPK 134 (206)
T ss_dssp ----HH-T--TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCC-CEEEEEEEECTTSCEEEEECCSSSHH
T ss_pred ----HH-H--hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCc-ceecceeEEcCCceEEeeecCCCchH
Confidence 12 1 237899999999999999 999999999999999999999997 889 5777765542 1 25888999
Q ss_pred HHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEE-ecCcccCCHHHHHh
Q 001380 229 LSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLI-RKEIGSVSLNDILT 296 (1089)
Q Consensus 229 ~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~v-i~dl~el~i~~ll~ 296 (1089)
..+++++++.+++|+||||+.+|+.+|+++|+.++ +. ..+++....++++ +.++.++ .++|.
T Consensus 135 ~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~-~~---~~~~~~~~~~~~~~~~~~~~l--~~~l~ 197 (206)
T 1rku_A 135 RQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGIL-FH---APENVIREFPQFPAVHTYEDL--KREFL 197 (206)
T ss_dssp HHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEE-ES---CCHHHHHHCTTSCEECSHHHH--HHHHH
T ss_pred HHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEE-EC---CcHHHHHHHhhhccccchHHH--HHHHH
Confidence 99999999999999999999999999999999865 32 3445666677775 8888887 44543
No 225
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=5.4e-18 Score=165.23 Aligned_cols=103 Identities=16% Similarity=0.238 Sum_probs=97.2
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 001380 166 GFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVI 245 (1089)
Q Consensus 166 ~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~V 245 (1089)
++||+.++|+.|+++|++++|+||+....++..++.+|+. .+|+.++++++....||++++|+++++++|++|++++||
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 97 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN-GVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLV 97 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT-TSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH-hhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 4678899999999999999999999999999999999996 999999999989999999999999999999999999999
Q ss_pred cCChhhHHHHHHcCCeEEEEcCCC
Q 001380 246 EDALAGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 246 GD~~~Di~aA~~aG~~~i~V~~g~ 269 (1089)
||+.+|+++|+++|+.++++.++.
T Consensus 98 gD~~~di~~a~~~G~~~i~~~~~~ 121 (137)
T 2pr7_A 98 DDSILNVRGAVEAGLVGVYYQQFD 121 (137)
T ss_dssp ESCHHHHHHHHHHTCEEEECSCHH
T ss_pred cCCHHHHHHHHHCCCEEEEeCChH
Confidence 999999999999999999998764
No 226
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=99.71 E-value=1.3e-17 Score=179.22 Aligned_cols=194 Identities=14% Similarity=0.135 Sum_probs=132.3
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhh-hc-C-CCHHHHHHHHHhhcCCCCCCHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLP-FM-G-TGEANFLGGVASVKGVKGFDSEAAKKRFFEI 153 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1089)
.++++|+||+||||+++... ..+++.++. .....+.. +. + .+.......+..... . . ..+++.+.
T Consensus 4 ~~~k~viFD~DGTL~d~ds~-----~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~-~---~~~~~~~~ 71 (236)
T 2fea_A 4 TRKPFIICDFDGTITMNDNI-----INIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLP--S-S---LKEEITSF 71 (236)
T ss_dssp CCCEEEEECCTTTTBSSCHH-----HHHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSB--G-G---GHHHHHHH
T ss_pred CCCcEEEEeCCCCCCccchH-----HHHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcC--C-C---hHHHHHHH
Confidence 35799999999999976432 122233332 11222211 21 1 234444444433221 1 1 11222222
Q ss_pred HHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccC--------CCCCH
Q 001380 154 YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFEN--------LKPAP 225 (1089)
Q Consensus 154 ~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~--------~KP~~ 225 (1089)
+... ..++||+.++|+.|+++|++++|+||+....++..++ ++. .+ +.+++++.... .||+|
T Consensus 72 ~~~~------~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~-~~-~~v~~~~~~~~~~~~~~~~~kp~p 141 (236)
T 2fea_A 72 VLED------AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIV-EK-DRIYCNHASFDNDYIHIDWPHSCK 141 (236)
T ss_dssp HHHH------CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTS-CG-GGEEEEEEECSSSBCEEECTTCCC
T ss_pred HhcC------CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCC-CC-CeEEeeeeEEcCCceEEecCCCCc
Confidence 1111 2789999999999999999999999999988888888 774 55 88998876554 78998
Q ss_pred HH-HH-------HHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcC-CcEEecCcccCCHHHHHh
Q 001380 226 DI-FL-------SASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEAS-PSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 226 ~~-~~-------~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~-~d~vi~dl~el~i~~ll~ 296 (1089)
.+ +. .+++++++++++|+||||+.+|+.+|+++|+.++. ++ ..+.+...+ +++++.++.++ .++|.
T Consensus 142 ~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~-~~~~~~~~~~~~~~~~~~~el--~~~l~ 216 (236)
T 2fea_A 142 GTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DY-LLNECREQNLNHLPYQDFYEI--RKEIE 216 (236)
T ss_dssp TTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HH-HHHHHHHTTCCEECCSSHHHH--HHHHH
T ss_pred cccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hH-HHHHHHHCCCCeeecCCHHHH--HHHHH
Confidence 84 54 89999999999999999999999999999998863 33 234455554 89999999887 45554
Q ss_pred c
Q 001380 297 G 297 (1089)
Q Consensus 297 ~ 297 (1089)
.
T Consensus 217 ~ 217 (236)
T 2fea_A 217 N 217 (236)
T ss_dssp T
T ss_pred H
Confidence 3
No 227
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.71 E-value=1.2e-17 Score=202.47 Aligned_cols=104 Identities=23% Similarity=0.254 Sum_probs=91.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC--ChHhHHHHHHHC--CCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSA--DRIKVDANLAAA--GLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTS 240 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~--~~~~~~~~l~~~--gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~ 240 (1089)
.++||+.++|+.|+++|++++|+||+ ........+... ++. .+||.++++++++..||+|++|+++++++|++|+
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~-~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~ 178 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK-MHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS 178 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH-TTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhh-hheeEEEeccccCCCCCCHHHHHHHHHHcCCChh
Confidence 78999999999999999999999998 222223333333 675 8899999999999999999999999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCeEEEEcCCC
Q 001380 241 ECIVIEDALAGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 241 ~~v~VGD~~~Di~aA~~aG~~~i~V~~g~ 269 (1089)
+|+||||+.+|+++|+++||+++++.++.
T Consensus 179 ~~~~v~D~~~di~~a~~aG~~~~~~~~~~ 207 (555)
T 3i28_A 179 EVVFLDDIGANLKPARDLGMVTILVQDTD 207 (555)
T ss_dssp GEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred HEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence 99999999999999999999999998865
No 228
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.71 E-value=2.6e-15 Score=166.87 Aligned_cols=206 Identities=12% Similarity=0.170 Sum_probs=161.0
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~ 735 (1089)
+..|.|++++++|+.||++|+.++.|++++++++ ++.+... ...|.+|+++++| .+|+++.
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~-----------------~~~~~~l~~~~dg-~l~v~~~ 87 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHP-----------------SHHQNGHCLNKQG-HLIACSH 87 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESS-----------------CSSEEEEEECTTC-CEEEEET
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECC-----------------CCCcceeeECCCC-cEEEEec
Confidence 4578999999999989999999999999999988 7766531 1368999999988 6999999
Q ss_pred CCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeC-----------------CCCeEE
Q 001380 736 GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS-----------------ESSSIR 798 (1089)
Q Consensus 736 ~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~-----------------~~~~I~ 798 (1089)
+.+.|+++|+.+|....+.... ....+..|++|+++++| ++|++|+ ..+.|+
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~~~----------~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~ 156 (296)
T 3e5z_A 88 GLRRLERQREPGGEWESIADSF----------EGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVF 156 (296)
T ss_dssp TTTEEEEECSTTCCEEEEECEE----------TTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred CCCeEEEEcCCCCcEEEEeecc----------CCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEE
Confidence 9899999999888877665311 01235578999999998 8999875 245899
Q ss_pred EEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCC-CCeE---EEEe
Q 001380 799 ALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPA-SNRV---STLA 874 (1089)
Q Consensus 799 ~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~-~~~v---~t~~ 874 (1089)
++++. +....+..+ +..|.+++++++|+++|+++.+++|.+++.+ ++.+ ..+.
T Consensus 157 ~~~~~-g~~~~~~~~----------------------~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 157 RLAPD-GTLSAPIRD----------------------RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp EECTT-SCEEEEECC----------------------CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE
T ss_pred EECCC-CCEEEeecC----------------------CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe
Confidence 99877 555444321 4578999999999877999999999999875 4555 1221
Q ss_pred ccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCceEEEEe
Q 001380 875 GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 875 g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
.. ....|.+|++|++|+|||++ ++.|.++++++. .+..+.
T Consensus 214 ~~-------------~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~--~~~~~~ 253 (296)
T 3e5z_A 214 TV-------------EPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGD--ELGRVL 253 (296)
T ss_dssp CC-------------SSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSC--EEEEEE
T ss_pred eC-------------CCCCCCeEEECCCCCEEEEc--CCeEEEECCCCC--EEEEEE
Confidence 11 23569999999999999999 789999999875 455554
No 229
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.71 E-value=1.2e-17 Score=195.19 Aligned_cols=196 Identities=15% Similarity=0.112 Sum_probs=135.1
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCH---HHHHHHHHhhcCCCCCCHHHHHHHHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGE---ANFLGGVASVKGVKGFDSEAAKKRFFEI 153 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1089)
+++++|+||+||||++.+. +..+.+.+|+......+......+. ........... .. ...+....+
T Consensus 183 ~~~k~viFD~DgTLi~~~~-----~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l--~~-~~~~~~~~~--- 251 (415)
T 3p96_A 183 RAKRLIVFDVDSTLVQGEV-----IEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATL--AG-LPATVIDEV--- 251 (415)
T ss_dssp TCCCEEEECTBTTTBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTT--TT-CBTHHHHHH---
T ss_pred cCCcEEEEcCcccCcCCch-----HHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHh--cC-CCHHHHHHH---
Confidence 5689999999999999873 4556666666543333333222222 22222222211 11 111222222
Q ss_pred HHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEE-------Ec---CCccCCCC
Q 001380 154 YLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIV-------SA---DAFENLKP 223 (1089)
Q Consensus 154 ~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~-------~~---~~~~~~KP 223 (1089)
.+. ..++||+.++|+.|+++|++++|+||+....++.+++++|+. .+|+..+ ++ +++..+||
T Consensus 252 -~~~------~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~-~~~~~~l~~~dg~~tg~~~~~v~~~kp 323 (415)
T 3p96_A 252 -AGQ------LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD-YVAANELEIVDGTLTGRVVGPIIDRAG 323 (415)
T ss_dssp -HHH------CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS-EEEEECEEEETTEEEEEECSSCCCHHH
T ss_pred -HHh------CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc-ceeeeeEEEeCCEEEeeEccCCCCCcc
Confidence 222 178999999999999999999999999999999999999996 7765432 22 24555899
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 224 APDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 224 ~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
++++|+++++++|+++++|+||||+.+|+.+|+++|+.+++ + ..+.+.+ .+++++.+..--.+..+|.
T Consensus 324 k~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~---~~~~~~~-~ad~~i~~~~l~~ll~~l~ 391 (415)
T 3p96_A 324 KATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-N---AKPALRE-VADASLSHPYLDTVLFLLG 391 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S---CCHHHHH-HCSEEECSSCTTHHHHHTT
T ss_pred hHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-C---CCHHHHH-hCCEEEccCCHHHHHHHhC
Confidence 99999999999999999999999999999999999987765 2 2333333 4788876543333344444
No 230
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=2.8e-15 Score=169.54 Aligned_cols=210 Identities=14% Similarity=0.173 Sum_probs=158.6
Q ss_pred CCCCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC-
Q 001380 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE- 677 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~- 677 (1089)
+..|.++++++ +++|||++...++|.++|+. ++....+..+.. ...+..|.+|++ +++.|||++.+
T Consensus 83 ~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~---------~~~~~~p~~i~~--~~~~lyv~~~~~ 150 (328)
T 3dsm_A 83 FTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDM---------DMESGSTEQMVQ--YGKYVYVNCWSY 150 (328)
T ss_dssp CSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC---------CTTTCBCCCEEE--ETTEEEEEECTT
T ss_pred CCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc---------cccCCCcceEEE--ECCEEEEEcCCC
Confidence 46799999987 67999999778999999987 455555554311 123568999999 35669999984
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC----------cEEEEEECCC
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ----------HQIWEHSTVD 747 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~----------~~I~~~~~~~ 747 (1089)
++.|.+||+.++.+......+ ..|.+++++++| .+|++..+. +.|+++|+.+
T Consensus 151 ~~~v~viD~~t~~~~~~i~~g-----------------~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 151 QNRILKIDTETDKVVDELTIG-----------------IQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECS-----------------SCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred CCEEEEEECCCCeEEEEEEcC-----------------CCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCC
Confidence 889999999988765544322 268999999987 799998876 8999999998
Q ss_pred CeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCC
Q 001380 748 GVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR 827 (1089)
Q Consensus 748 g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~ 827 (1089)
+.+....... . -..|++|+++++++.||+++. .|.+++++++.+... .....+
T Consensus 213 ~~v~~~~~~~------------~-g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~---------~~~~~~-- 265 (328)
T 3dsm_A 213 FTVEKQFKFK------------L-GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR---------PFLEFR-- 265 (328)
T ss_dssp TEEEEEEECC------------T-TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSS---------CSBCCC--
T ss_pred CeEEEEEecC------------C-CCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeee---------eeecCC--
Confidence 8765332110 0 136999999999999999986 899999886554100 000000
Q ss_pred CCccccccccCceEEEEcc-CCcEEEEe----CCCCEEEEEeCCCCeEEEEe
Q 001380 828 DGMGSEVLLQHPLGVYCAK-NGQIYVAD----SYNHKIKKLDPASNRVSTLA 874 (1089)
Q Consensus 828 dg~~~~~~l~~P~gva~~~-~G~lyVaD----~~n~~I~~~d~~~~~v~t~~ 874 (1089)
...|.|+++|+ +|++||++ ..+++|.+||+++..+.++.
T Consensus 266 --------~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~ 309 (328)
T 3dsm_A 266 --------DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFY 309 (328)
T ss_dssp --------SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEE
T ss_pred --------CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEE
Confidence 35799999998 78999999 88999999999977777764
No 231
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=99.70 E-value=1.1e-17 Score=177.48 Aligned_cols=128 Identities=22% Similarity=0.256 Sum_probs=109.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCCh---------------HhHHHHHHHCCCCCCCccEEE-Ec-----------CC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADR---------------IKVDANLAAAGLPVSMFDAIV-SA-----------DA 217 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~---------------~~~~~~l~~~gl~~~~fd~i~-~~-----------~~ 217 (1089)
.++||+.++|+.|+++|++++|+||+.. ..++..++++|+. |+.++ +. ++
T Consensus 56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~~~~~~~~g~~~~~~~~ 132 (218)
T 2o2x_A 56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF---VDMVLACAYHEAGVGPLAIPD 132 (218)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCCTTCCSTTCCSS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc---eeeEEEeecCCCCceeecccC
Confidence 6899999999999999999999999987 7889999999984 66644 43 56
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeE-EEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 218 FENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRC-IAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 218 ~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~-i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
...+||++.+|+.+++++|++|++|+||||+.+|+++|+++|+++ ++|.+|....+.....|++++.++.++ .+++.
T Consensus 133 ~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el--~~~l~ 210 (218)
T 2o2x_A 133 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDL--LAAIE 210 (218)
T ss_dssp CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHH--HHHHH
T ss_pred CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHH--HHHHH
Confidence 778999999999999999999999999999999999999999999 999998743333445788888888887 45554
Q ss_pred c
Q 001380 297 G 297 (1089)
Q Consensus 297 ~ 297 (1089)
.
T Consensus 211 ~ 211 (218)
T 2o2x_A 211 T 211 (218)
T ss_dssp H
T ss_pred H
Confidence 3
No 232
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.52 E-value=1.5e-18 Score=170.80 Aligned_cols=117 Identities=17% Similarity=0.260 Sum_probs=101.8
Q ss_pred CCCCCccccCCCCCceeecccc-cCCC-EEEEEEecCCCcchhhhhhhHHHHHHHcCC--CCEEEEEEeCCCCCChhcHH
Q 001380 429 IVPEFPAKLDWLNTAPLQFRRD-LKGK-VVVLDFWTYCCINCMHVLPDLEFLEKKYKD--MPFTVVGVHSAKFDNEKDLE 504 (1089)
Q Consensus 429 ~~P~f~~~~~~~~g~~~~l~~~-~~gk-~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~--~~v~vi~v~~~~~~~~~~~~ 504 (1089)
.+|+|++ .+++|+.+++ ++ ++|| ++||+||++||++|+.++|.|++++++|++ .++.+++|++ +++.+
T Consensus 3 ~~p~~~l--~~~~g~~~~l-~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~-----d~~~~ 74 (143)
T 2lus_A 3 FIQGIKL--VKKNRCEVNA-NEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSS-----DRSED 74 (143)
Confidence 5789985 4569999999 78 9999 999999999999999999999999999953 4799999965 45678
Q ss_pred HHHHHHHHcCCccce---eecCChhHHHHhCCCceeEEEEECCCCcEEEEec
Q 001380 505 AIRNAVLRYGISHPV---VNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLA 553 (1089)
Q Consensus 505 ~~~~~~~~~~~~~~v---~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~ 553 (1089)
.+++++++++++|+. ..|...++++.|+|.++|++++||++|+++.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 75 DMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNG 126 (143)
Confidence 899999999999754 4556678999999999999999999999998843
No 233
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=99.69 E-value=7.9e-18 Score=177.66 Aligned_cols=124 Identities=19% Similarity=0.191 Sum_probs=98.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCC-CCccE--EEEcCC----ccCCCCCHHHHHHHH-HHcC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPV-SMFDA--IVSADA----FENLKPAPDIFLSAS-KILN 236 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~-~~fd~--i~~~~~----~~~~KP~~~~~~~~l-~~lg 236 (1089)
.++||+.++++.|+++|++++|+||+....++..++.+|+.. .+|.. +++.+. ....||++..+..++ +.+|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 588999999999999999999999999999999999999951 34542 222332 245788776665555 5569
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC-CHHHHhhcCCcEEecCcccC
Q 001380 237 VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL-SEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 237 v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~~~d~vi~dl~el 289 (1089)
+++++|+||||+.+|+.++ ++|+.+++|..+. ...+.....|++++.++.++
T Consensus 162 ~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el 214 (219)
T 3kd3_A 162 LIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL 214 (219)
T ss_dssp GCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred CCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence 9999999999999999998 6899988887765 34444455799999999887
No 234
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.69 E-value=1.1e-16 Score=178.61 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=110.2
Q ss_pred CCCCCCccccCCCCCceeecccccCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHH
Q 001380 428 PIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAI 506 (1089)
Q Consensus 428 ~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~ 506 (1089)
.++|+|++. +.+|++++| ++++||+|||+|| +.||+.|..|++.|++ ...+++.|||||. |+.+..
T Consensus 2 ak~p~F~l~--~~~G~~~~L-sd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~------D~~~~~ 68 (322)
T 4eo3_A 2 ARVKHFELL--TDEGKTFTH-VDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISR------DSVEAL 68 (322)
T ss_dssp CBCCCCEEE--ETTSCEEEG-GGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEES------CCHHHH
T ss_pred CCCCCcEEE--CCCcCEEeH-HHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeC------CCHHHH
Confidence 468999965 569999999 9999999999999 6899999999988864 2335799999985 578888
Q ss_pred HHHHHHcCCccceeecCChhHHHHhCCC----ceeEEEEECCCCcEEEEecCC---CchhhHHHHHHHHHH
Q 001380 507 RNAVLRYGISHPVVNDGDMNLWRELGVN----SWPTFAVVGPNGKLLAQLAGE---GHRKDLDDLVEAALL 570 (1089)
Q Consensus 507 ~~~~~~~~~~~~v~~d~~~~l~~~~~v~----~~Pt~~lid~~G~i~~~~~G~---~~~~~l~~~l~~~l~ 570 (1089)
++|+++++++||++.|+++++++.|||. .+|++||||++|+|++.+.+. .|.+++.+.++++..
T Consensus 69 ~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~~ 139 (322)
T 4eo3_A 69 KRFKEKNDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLIE 139 (322)
T ss_dssp HHHHHHHTCCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhch
Confidence 9999999999999999999999999994 589999999999999887664 356666666666643
No 235
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=8.6e-15 Score=164.86 Aligned_cols=238 Identities=14% Similarity=0.173 Sum_probs=177.0
Q ss_pred EEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEE
Q 001380 607 AIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685 (1089)
Q Consensus 607 avd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d 685 (1089)
.++..++++|+++...++|.++|.+ |+.+..+..+ ...| +++++++|+.+|+++..++.|+++|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d 68 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG--------------YDFV-DTAITSDCSNVVVTSDFCQTLVQIE 68 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC--------------CCEE-EEEECSSSCEEEEEESTTCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc--------------CCcc-eEEEcCCCCEEEEEeCCCCeEEEEE
Confidence 3445578999999999999999987 7776665533 1246 9999999999999999899999999
Q ss_pred CCCCeE-EEEecCCCCCCCCCCCCcccccccCCcee-EEEecCCCEEEEEECCCc--EEEEEECCCCeEEEEeCCCcccc
Q 001380 686 FVNDTV-RTLAGNGTKGSDYQGGEKGTSQLLNSPWD-VCYKPINEKVYIAMAGQH--QIWEHSTVDGVTRAFSGDGYERN 761 (1089)
Q Consensus 686 ~~~g~v-~~~ag~g~~~~~~~~~~~~~~~~l~~P~~-la~~~~g~~lyvad~~~~--~I~~~~~~~g~~~~~~g~g~~~~ 761 (1089)
+.++.+ ......+ ..|.. ++++|+|+.+|++...++ .|+.||..++.+......
T Consensus 69 ~~~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~----- 126 (331)
T 3u4y_A 69 TQLEPPKVVAIQEG-----------------QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI----- 126 (331)
T ss_dssp CSSSSCEEEEEEEC-----------------SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-----
T ss_pred CCCCceeEEecccC-----------------CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-----
Confidence 988774 3222211 25777 999999999995554445 999999988876544321
Q ss_pred CCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCe-EEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCce
Q 001380 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSS-IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840 (1089)
Q Consensus 762 ~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~-I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~ 840 (1089)
-..|.+++++|+|+.||+++...+. |..++.+.++...-.... .. ..-..|.
T Consensus 127 ----------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~------~~-----------~~~~~~~ 179 (331)
T 3u4y_A 127 ----------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE------FI-----------SGGTRPF 179 (331)
T ss_dssp ----------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE------EE-----------CSSSSEE
T ss_pred ----------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc------cc-----------cCCCCcc
Confidence 1257899999999889999998788 888877643321110000 00 0013589
Q ss_pred EEEEccCCc-EEEEeCCCCEEEEEeCCCCe----EEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECCCCE
Q 001380 841 GVYCAKNGQ-IYVADSYNHKIKKLDPASNR----VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNI 914 (1089)
Q Consensus 841 gva~~~~G~-lyVaD~~n~~I~~~d~~~~~----v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~ 914 (1089)
+++++++|+ +|+++..+++|.++|..++. +.++.. -..|.+++++++|+ ||+++..++.
T Consensus 180 ~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~---------------~~~~~~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT---------------NNLPGTIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC---------------SSCCCCEEECTTSSEEEEECSSEEE
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC---------------CCCCceEEECCCCCEEEEEEcCCCE
Confidence 999999996 99999999999999997666 444432 14589999999997 9999988899
Q ss_pred EEEEeCCCC
Q 001380 915 IRYLDLNKE 923 (1089)
Q Consensus 915 I~~~~~~~~ 923 (1089)
|.++++.+.
T Consensus 245 i~~~d~~~~ 253 (331)
T 3u4y_A 245 VFNFNQLSG 253 (331)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 999999876
No 236
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.68 E-value=2.3e-14 Score=161.85 Aligned_cols=235 Identities=14% Similarity=0.155 Sum_probs=174.4
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
..+..+.++++++.++.||++|...++|.+++.++.....+... ..|.+++++++|+ +|++.
T Consensus 46 ~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~---------------~~v~~i~~~~dg~-l~v~~-- 107 (326)
T 2ghs_A 46 TPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALP---------------FMGSALAKISDSK-QLIAS-- 107 (326)
T ss_dssp SCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECS---------------SCEEEEEEEETTE-EEEEE--
T ss_pred cCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECC---------------CcceEEEEeCCCe-EEEEE--
Confidence 34567889999987799999999999999999987665554322 2578999999988 78887
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC------CcEEEEEECCCCeEE
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG------QHQIWEHSTVDGVTR 751 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~------~~~I~~~~~~~g~~~ 751 (1089)
.+.|+++|++++.++.+..... + ...+.+++++++++| .+|+++.+ .+.|++++ ++.+.
T Consensus 108 ~~gl~~~d~~~g~~~~~~~~~~-~-----------~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~~ 172 (326)
T 2ghs_A 108 DDGLFLRDTATGVLTLHAELES-D-----------LPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKVT 172 (326)
T ss_dssp TTEEEEEETTTCCEEEEECSST-T-----------CTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEEE
T ss_pred CCCEEEEECCCCcEEEEeeCCC-C-----------CCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcEE
Confidence 4569999999888887753211 0 113468999999988 68988753 47899999 56665
Q ss_pred EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcC--CC-Ce---EEEecCCCCCCCCccccC
Q 001380 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK--TG-GS---RLLAGGDPIFPDNLFKFG 825 (1089)
Q Consensus 752 ~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~--~~-~~---~~~~g~~~~~~~~l~~~g 825 (1089)
.+.. .+..|++++++++|+.||++++.++.|.+++.+ ++ .. +.+. .+.
T Consensus 173 ~~~~---------------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~-----------~~~ 226 (326)
T 2ghs_A 173 KLFA---------------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFI-----------DST 226 (326)
T ss_dssp EEEE---------------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEE-----------ECT
T ss_pred EeeC---------------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEE-----------ECC
Confidence 5531 233588999999998999999999999999975 33 21 1111 111
Q ss_pred CCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEc-cCC-
Q 001380 826 DRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEA-QNG- 903 (1089)
Q Consensus 826 ~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd-~~G- 903 (1089)
. ....|.++++|++|++||++..+++|.++|+++..+.++... ...|.+++++ +++
T Consensus 227 ~--------~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~--------------~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 227 G--------IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVP--------------GKQTTCPAFIGPDAS 284 (326)
T ss_dssp T--------SSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECS--------------CSBEEEEEEESTTSC
T ss_pred C--------CCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECC--------------CCCcEEEEEecCCCC
Confidence 0 013589999999999999998889999999976666666421 2348899997 665
Q ss_pred cEEEEECCCC
Q 001380 904 NLFIADTNNN 913 (1089)
Q Consensus 904 ~lyVad~~n~ 913 (1089)
.|||+....+
T Consensus 285 ~L~vt~~~~~ 294 (326)
T 2ghs_A 285 RLLVTSAREH 294 (326)
T ss_dssp EEEEEEBCTT
T ss_pred EEEEEecCCC
Confidence 5999876654
No 237
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=99.68 E-value=2.3e-17 Score=170.46 Aligned_cols=107 Identities=17% Similarity=0.168 Sum_probs=96.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCC-hHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcE
Q 001380 164 GIGFPGALELINQCKSKGLKVAVASSAD-RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSEC 242 (1089)
Q Consensus 164 ~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~-~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~ 242 (1089)
..++||+.++|+.|+++|++++|+||+. ...++..++.+|+. .+|+.++... +|+++.|..+++++|++|++|
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~-~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 140 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF-RYFVHREIYP-----GSKITHFERLQQKTGIPFSQM 140 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT-TTEEEEEESS-----SCHHHHHHHHHHHHCCCGGGE
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH-hhcceeEEEe-----CchHHHHHHHHHHcCCChHHE
Confidence 3689999999999999999999999998 69999999999997 9999886543 578899999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhh
Q 001380 243 IVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKE 276 (1089)
Q Consensus 243 v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~ 276 (1089)
+||||+.+|+.+|+++|+.+++|.+|...+.+..
T Consensus 141 ~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~ 174 (187)
T 2wm8_A 141 IFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQ 174 (187)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHH
T ss_pred EEEeCCccChHHHHHcCCEEEEECCCCChHHHHH
Confidence 9999999999999999999999999876655543
No 238
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=2e-14 Score=161.92 Aligned_cols=253 Identities=13% Similarity=0.166 Sum_probs=182.2
Q ss_pred CCCCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCE-EEEEecCCCCCCCCCCCCccccCCcce-eEEeeCCCEEEEEEC
Q 001380 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNF-IVQIGSSGEEGLRDGSFDDATFNRPQG-LAYNAKKNLLYVADT 676 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~-~~~i~~~g~~g~~dG~~~~~~f~~P~g-la~d~~g~~lyVaD~ 676 (1089)
...| ++++++.+..||+++.+.++|.++|.+ ++. ...+... ..|.. ++++|+|+.+|+++.
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------~~~~~~~~~s~dg~~l~~~~~ 103 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG---------------QSSMADVDITPDDQFAVTVTG 103 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC---------------SSCCCCEEECTTSSEEEECCC
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC---------------CCCccceEECCCCCEEEEecC
Confidence 3456 899998666799999988999999986 554 4444332 25677 999999998896554
Q ss_pred CCC--EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcE-EEEEECCC-CeEEE
Q 001380 677 ENH--ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQ-IWEHSTVD-GVTRA 752 (1089)
Q Consensus 677 ~n~--~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~-I~~~~~~~-g~~~~ 752 (1089)
.++ .|+.+|..++.+......+ ..|.+++++|+|+.+|+++...+. |+.|+... +.+..
T Consensus 104 ~~~~~~i~v~d~~~~~~~~~~~~~-----------------~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 104 LNHPFNMQSYSFLKNKFISTIPIP-----------------YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp SSSSCEEEEEETTTTEEEEEEECC-----------------TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CCCcccEEEEECCCCCeEEEEECC-----------------CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 445 9999999888765544322 267999999999889999988777 77666543 22221
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCe----EEEecCCCCCCCCccccCCCC
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS----RLLAGGDPIFPDNLFKFGDRD 828 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~----~~~~g~~~~~~~~l~~~g~~d 828 (1089)
... ... ..-..|.+++++++|+.+|+++...+.|+.++..++.. ..+..
T Consensus 167 ~~~--~~~---------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~---------------- 219 (331)
T 3u4y_A 167 TGQ--EFI---------SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT---------------- 219 (331)
T ss_dssp EEE--EEE---------CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----------------
T ss_pred cCC--ccc---------cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC----------------
Confidence 110 000 11135899999999988999999999999999986654 22211
Q ss_pred CccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EE
Q 001380 829 GMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LF 906 (1089)
Q Consensus 829 g~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-ly 906 (1089)
-..|.+++++++|+ +|++....+.|.++|..++.+..+......-..++ .......+++++++|+ ||
T Consensus 220 -------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~spdg~~l~ 288 (331)
T 3u4y_A 220 -------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDP----RPLFGANQMALNKTETKLF 288 (331)
T ss_dssp -------SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCC----GGGTTCCCEEECTTSSEEE
T ss_pred -------CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCC----CCcccccceEECCCCCEEE
Confidence 13588899999997 99999888999999999888755542211000000 1222236789999986 89
Q ss_pred EEECCCCEEEEEeCCCC
Q 001380 907 IADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 907 Vad~~n~~I~~~~~~~~ 923 (1089)
++...++.|.++++.+.
T Consensus 289 v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 289 ISANISRELKVFTISGK 305 (331)
T ss_dssp EEETTTTEEEEEETTSC
T ss_pred EecCCCCcEEEEEecCC
Confidence 99999999999999886
No 239
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=99.68 E-value=1.2e-16 Score=167.58 Aligned_cols=190 Identities=22% Similarity=0.264 Sum_probs=125.5
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASV-KGVKGFDSEAAKKRFFEIYLD 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 156 (1089)
++|+|+||+||||+|+.. +..+++.+|.+.....+......+...+...+... ......... .+.+.+
T Consensus 4 ~~k~i~fDlDGTL~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-- 72 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIE----KVEKAI-- 72 (211)
T ss_dssp CCEEEEEECCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHH----HHHHHH--
T ss_pred CCcEEEEeCCCCCCCccH-----HHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcCCCHH----HHHHHH--
Confidence 579999999999999863 34556666664322222211111101111111110 111111111 111111
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCC----------ccCCCCCHH
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADA----------FENLKPAPD 226 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~----------~~~~KP~~~ 226 (1089)
.. ..+.|++.++|+.|+++|++++|+|++....++..++.+++. .+|+.++...+ ....++++.
T Consensus 73 --~~---~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 146 (211)
T 1l7m_A 73 --KR---ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD-YAFANRLIVKDGKLTGDVEGEVLKENAKGE 146 (211)
T ss_dssp --HT---CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEECSSCSTTHHHH
T ss_pred --Hh---CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC-eEEEeeeEEECCEEcCCcccCccCCccHHH
Confidence 11 257899999999999999999999998888888889999986 66655432211 123467789
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecC--cccC
Q 001380 227 IFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKE--IGSV 289 (1089)
Q Consensus 227 ~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~d--l~el 289 (1089)
.+..+++++|+++++|++|||+.+|+.+|+.+|+. +++. ..+.+ ...+++++.+ +.++
T Consensus 147 ~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~-~~~~---~~~~~-~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 147 ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLK-IAFC---AKPIL-KEKADICIEKRDLREI 206 (211)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EEES---CCHHH-HTTCSEEECSSCGGGG
T ss_pred HHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCE-EEEC---CCHHH-HhhcceeecchhHHHH
Confidence 99999999999999999999999999999999986 3443 23344 3479999988 7776
No 240
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=99.67 E-value=1.6e-17 Score=188.83 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=148.6
Q ss_pred cCCcccCCchHHHHHHHHHHHH-cCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHH------HHHHHh
Q 001380 86 MDGVLCNSEEPSRRAAVDVFAE-MGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFE------IYLDKY 158 (1089)
Q Consensus 86 ~DGTL~d~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 158 (1089)
+|||+. ....+..++.+..++ +++. .+.+....|.........+...++. .....++.. .....+
T Consensus 137 fD~t~~-~~d~i~~~l~~~a~~~~~i~--~~~~~~~~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 208 (384)
T 1qyi_A 137 LDNVKV-GKNNIYAALEEFATTELHVS--DATLFSLKGALWTLAQEVYQEWYLG-----SKLYEDVEKKIARTTFKTGYI 208 (384)
T ss_dssp HTTCCS-SHHHHHHHHHHHHHHHTTCS--CCGGGSTTCHHHHHHHHHHHHHHHH-----HHHHHHHHCSCCSCSSCCCTT
T ss_pred hcCCCc-cHHHHHHHHHHHHHHhCCCC--HHHHHHhcCCCHHHHHHHHHHHcCC-----ccCHHHHHhHHHHHHHHHHHH
Confidence 466665 344566777777664 4654 3445556666555555555443221 000111100 000001
Q ss_pred cCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCcc--EEEEcCCcc-----------CCCCCH
Q 001380 159 AKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFD--AIVSADAFE-----------NLKPAP 225 (1089)
Q Consensus 159 ~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd--~i~~~~~~~-----------~~KP~~ 225 (1089)
.......++||+.++|+.|+++|++++|+||+.+..++..++++|+. .+|+ .+++++++. .+||+|
T Consensus 209 ~~~~~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~-~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P 287 (384)
T 1qyi_A 209 YQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL-PYFEADFIATASDVLEAENMYPQARPLGKPNP 287 (384)
T ss_dssp TTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG-GGSCGGGEECHHHHHHHHHHSTTSCCCCTTST
T ss_pred hhccCCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh-HhcCCCEEEecccccccccccccccCCCCCCH
Confidence 11123478999999999999999999999999999999999999996 9999 899988765 389999
Q ss_pred HHHHHHHHHcC--------------CCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCC----HHHHhhcCCcEEecCcc
Q 001380 226 DIFLSASKILN--------------VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLS----EERLKEASPSLIRKEIG 287 (1089)
Q Consensus 226 ~~~~~~l~~lg--------------v~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~----~~~l~~~~~d~vi~dl~ 287 (1089)
++|..+++++| ++|++|+||||+.+|+.+|+++||.+|+|.+|.. .+++...+|+++++++.
T Consensus 288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~ 367 (384)
T 1qyi_A 288 FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLG 367 (384)
T ss_dssp HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGG
T ss_pred HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHH
Confidence 99999999999 8999999999999999999999999999999863 45666678999999999
Q ss_pred cCCHHHHHhcc
Q 001380 288 SVSLNDILTGG 298 (1089)
Q Consensus 288 el~i~~ll~~~ 298 (1089)
++ ..+|...
T Consensus 368 eL--~~~l~~~ 376 (384)
T 1qyi_A 368 EL--RGVLDNL 376 (384)
T ss_dssp GH--HHHHSCT
T ss_pred HH--HHHHHHH
Confidence 98 6666544
No 241
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.66 E-value=1.4e-14 Score=161.26 Aligned_cols=209 Identities=12% Similarity=0.134 Sum_probs=157.7
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~ 735 (1089)
+..+.|.+++++++.||++|..+++|+++|++++.+..+... ..|.+++++++|+ +|++.
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~------------------~~~~~i~~~~dG~-l~v~~- 71 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMD------------------APVSSVALRQSGG-YVATI- 71 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECS------------------SCEEEEEEBTTSS-EEEEE-
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCC------------------CceEEEEECCCCC-EEEEE-
Confidence 446799999997777999999999999999998887665421 2688999999985 88887
Q ss_pred CCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeC-----------CCCeEEEEEcCC
Q 001380 736 GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS-----------ESSSIRALNLKT 804 (1089)
Q Consensus 736 ~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~-----------~~~~I~~~~~~~ 804 (1089)
.+.|+++|+.++.++.+..... ...+..|++++++++| ++|+++. ..+.|++++++
T Consensus 72 -~~~l~~~d~~~g~~~~~~~~~~----------~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~- 138 (297)
T 3g4e_A 72 -GTKFCALNWKEQSAVVLATVDN----------DKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPD- 138 (297)
T ss_dssp -TTEEEEEETTTTEEEEEEECCT----------TCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTT-
T ss_pred -CCeEEEEECCCCcEEEEEecCC----------CCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECC-
Confidence 4789999999998877753210 1224568999999998 7999874 34578888876
Q ss_pred CCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeC--CCCeEE---EEeccCC
Q 001380 805 GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDP--ASNRVS---TLAGIGK 878 (1089)
Q Consensus 805 ~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~--~~~~v~---t~~g~g~ 878 (1089)
+....+.. .+..|.|++++++|+ +||+|+.+++|.+++. .++.+. .+.....
T Consensus 139 g~~~~~~~----------------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~ 196 (297)
T 3g4e_A 139 HHVKKYFD----------------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK 196 (297)
T ss_dssp SCEEEEEE----------------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG
T ss_pred CCEEEEee----------------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC
Confidence 33333322 145799999999995 9999999999999974 566553 2221110
Q ss_pred CCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCceEEEEe
Q 001380 879 AGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 879 ~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
....|.||++|++|+|||++..+++|.++++++. ..+.++.
T Consensus 197 -----------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG-~~~~~i~ 237 (297)
T 3g4e_A 197 -----------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG-KRLQTVK 237 (297)
T ss_dssp -----------GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC-CEEEEEE
T ss_pred -----------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc-eEEEEEE
Confidence 1245999999999999999999999999999843 1445554
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=5.1e-15 Score=168.50 Aligned_cols=275 Identities=17% Similarity=0.137 Sum_probs=177.1
Q ss_pred ceeEEEEECCCCcEEEEecCCC-chhhHHHHHHHHHHHhcccccccCCCCCcccccCCCCCCCCCCCCCCceEEEeecCC
Q 001380 535 SWPTFAVVGPNGKLLAQLAGEG-HRKDLDDLVEAALLFYGKKKLLDNTPLPLSLEKDNDPRLFTSPLKFPGKLAIDILNN 613 (1089)
Q Consensus 535 ~~Pt~~lid~~G~i~~~~~G~~-~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~P~~vavd~~~g 613 (1089)
.+|+-+.++++|++........ ....+ .... .|.+... |- ... .....+..|.+|++|+ +|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l--------~~~~-~g~~~~~--p~-~~~-----~~~~~~~~p~gv~~d~-~g 78 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQV--------AELT-QDGLIPF--PP-QSG-----NAIITFDTVLGIKSDG-NG 78 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSE--------EEEE-TTEEEES--CC-CCS-----SCCCCCSCEEEEEECS-SS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEE--------EEEC-CCCeecC--CC-ccc-----CcccceeEeeEEEEcC-CC
Confidence 6899999999999865532110 00000 0111 2222211 10 000 1236789999999997 79
Q ss_pred eEEEEeCC-----CCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC---CCCEEEEE
Q 001380 614 RLFISDSN-----HNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT---ENHALREI 684 (1089)
Q Consensus 614 ~L~vsd~~-----~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~---~n~~I~~~ 684 (1089)
+|||+|++ .++|+++|++ |+.+.++......+ .....|++|+++++++.+||+|. .++.|.++
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~--------~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT--------LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS--------CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc--------ccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 99999987 5899999986 77677765431111 12357899999987667999999 88999999
Q ss_pred ECCCCeEEEEecC--CCCC--CCCC-CCC-------ccccc-ccCCceeEEEecCCCEEEEEECCCcEEEEEECC---CC
Q 001380 685 DFVNDTVRTLAGN--GTKG--SDYQ-GGE-------KGTSQ-LLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV---DG 748 (1089)
Q Consensus 685 d~~~g~v~~~ag~--g~~~--~~~~-~~~-------~~~~~-~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~---~g 748 (1089)
|+.++.+..+... +... .... .+. .+... ....|.+|+++|+|+.||+++...++|++++.. .+
T Consensus 151 d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 151 DLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp ETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred ECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 9988877665432 1100 0000 000 00000 113589999999999999999999999999842 11
Q ss_pred eEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCC
Q 001380 749 VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRD 828 (1089)
Q Consensus 749 ~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~d 828 (1089)
.+ +.+... ...........|.||++|++| +||+++.++++|.++++.++...++...
T Consensus 231 ~~----~~~~~~---~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~~~~~~~--------------- 287 (343)
T 2qe8_A 231 QL----TDAELG---SKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAYKLLVTD--------------- 287 (343)
T ss_dssp TC----CHHHHH---TTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEEEEEEEC---------------
T ss_pred CC----Chhhhh---cceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCEEEEEEC---------------
Confidence 10 000000 000000112379999999998 9999999999999999844555444321
Q ss_pred CccccccccCceEEEEccCCcEEEEeCCCCEEEEE
Q 001380 829 GMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKL 863 (1089)
Q Consensus 829 g~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~ 863 (1089)
..+.+|.+++++++|++||++...+++..|
T Consensus 288 -----~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 288 -----EKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp -----GGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred -----CceecCCeeEECCCCcEEEEeCcccccccc
Confidence 136789999999999999999876665444
No 243
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.66 E-value=5e-15 Score=168.90 Aligned_cols=283 Identities=11% Similarity=0.139 Sum_probs=172.4
Q ss_pred CCCCCCCCCceEEEeecCCe-EEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeC---CCE
Q 001380 595 LFTSPLKFPGKLAIDILNNR-LFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK---KNL 670 (1089)
Q Consensus 595 ~~~~~l~~P~~vavd~~~g~-L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~---g~~ 670 (1089)
.+++.|..|.+|++++ +|+ |||++.. ++|.+++.+|+....+..... -.. .....|.||+++|+ +..
T Consensus 12 ~va~~l~~P~~i~~~p-dG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~-v~~------~g~~g~~gia~~pdf~~~g~ 82 (353)
T 2g8s_A 12 VLQDKLDHPWALAFLP-DNHGMLITLRG-GELRHWQAGKGLSAPLSGVPD-VWA------HGQGGLLDVVLAPDFAQSRR 82 (353)
T ss_dssp EEEEEESSEEEEEECS-TTCCEEEEETT-TEEEEEETTTEECCCCBSCCC-CCC------STTCSEEEEEECTTHHHHCE
T ss_pred EEECCCCCcEEEEEcC-CCCEEEEEeCC-ceEEEEeCCCceeeEecCCcc-ccc------CCCCCceeEEECCCCCCCCE
Confidence 4456799999999998 788 9999984 899999988765433322110 000 01235799999995 556
Q ss_pred EEEEECC-------CCEEEEEECCCC-----eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC--
Q 001380 671 LYVADTE-------NHALREIDFVND-----TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-- 736 (1089)
Q Consensus 671 lyVaD~~-------n~~I~~~d~~~g-----~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-- 736 (1089)
|||+++. .++|.+++.+++ ..+++.. +... ......++.+|+++|+| .|||+...
T Consensus 83 lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~-~~p~---------~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~ 151 (353)
T 2g8s_A 83 IWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFR-QMPK---------LSTGNHFGGRLVFDGKG-YLFIALGENN 151 (353)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEE-CSSC---------CBSSSCCCCCEEECSSS-EEEEEECCTT
T ss_pred EEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEE-ECCC---------CCCCcccCccEEECCCC-cEEEEECCCC
Confidence 9999865 468998887643 2233321 1100 00113468899999988 99999743
Q ss_pred -----------CcEEEEEECCCCeEEEEeCCCccccCCC--CCCCCccccCCceEEEcCCCCEEEEEeCCCC---eEEEE
Q 001380 737 -----------QHQIWEHSTVDGVTRAFSGDGYERNLNG--SSSLNTSFAQPSGISLSPDFMEIYVADSESS---SIRAL 800 (1089)
Q Consensus 737 -----------~~~I~~~~~~~g~~~~~~g~g~~~~~~g--~~~~~~~~~~P~glav~~~g~~lyvad~~~~---~I~~~ 800 (1089)
.++|+++++++... .++. .....+ ......++.+|.||+++++.+.||++|.+.+ .|.++
T Consensus 152 ~~~~~q~~~~~~g~I~ri~~dG~~p---~~np-f~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i 227 (353)
T 2g8s_A 152 QRPTAQDLDKLQGKLVRLTDQGEIP---DDNP-FIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIP 227 (353)
T ss_dssp CGGGGGCTTSCTTEEEEEETTSCCC---TTCT-TTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECC
T ss_pred CCCccCCCCCCCeEEEEECCCCCCC---CCCC-CcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEe
Confidence 24788888764210 0110 000000 0112245788999999994449999998754 34433
Q ss_pred EcCCCCeEEEecCCCCCCCCcc-------ccCC-----CCCccc-c---ccccCceEEEEcc-------CCcEEEEeCCC
Q 001380 801 NLKTGGSRLLAGGDPIFPDNLF-------KFGD-----RDGMGS-E---VLLQHPLGVYCAK-------NGQIYVADSYN 857 (1089)
Q Consensus 801 ~~~~~~~~~~~g~~~~~~~~l~-------~~g~-----~dg~~~-~---~~l~~P~gva~~~-------~G~lyVaD~~n 857 (1089)
.. |+...++.... .++. ..+... . ..-..|.|+++.. +|++||++...
T Consensus 228 ~~---------G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~ 298 (353)
T 2g8s_A 228 QK---------GKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKD 298 (353)
T ss_dssp CT---------TCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTT
T ss_pred cc---------CCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccC
Confidence 22 11111111000 0000 000000 0 0013689999963 58999999999
Q ss_pred CEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEE-ECCCCEEEEEeC
Q 001380 858 HKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIA-DTNNNIIRYLDL 920 (1089)
Q Consensus 858 ~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVa-d~~n~~I~~~~~ 920 (1089)
++|.+++.+++.+...... ....+..|.+|+++++|.|||+ |..+++|.++.+
T Consensus 299 ~~v~~~~~~~~~~~~~~~~----------~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 299 KDVIVMSVNGDKVTEDGRI----------LTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp TEEEEEEEETTEEEEEEEE----------SGGGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred CEEEEEEeCCCeEeeeEEc----------ccCCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 9999998876543221110 0113468999999999999997 667899998875
No 244
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=99.65 E-value=6.3e-18 Score=187.21 Aligned_cols=119 Identities=16% Similarity=0.252 Sum_probs=102.0
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHhH--H--HHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHc----CCCCC
Q 001380 169 GALELINQCKSKGLKVAVASSADRIKV--D--ANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKIL----NVPTS 240 (1089)
Q Consensus 169 G~~~lL~~Lk~~Gi~vaIvSn~~~~~~--~--~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~l----gv~p~ 240 (1089)
...++++.|+++|++ +|+||...... . ..++..++. .+|+.+++++++..+||+|++|+.+++++ |++|+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~-~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVA-TMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHH-HHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHH-HHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 677788899999999 99999876654 2 123455674 78999999998999999999999999999 99999
Q ss_pred cEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHHh----h--cCCcEEecCcccC
Q 001380 241 ECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERLK----E--ASPSLIRKEIGSV 289 (1089)
Q Consensus 241 ~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l~----~--~~~d~vi~dl~el 289 (1089)
+|+||||++ +||.+|+++||++++|.+|. ..+++. . ..|+++++++.+|
T Consensus 227 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 227 EILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 999999996 99999999999999999987 455554 3 6899999999887
No 245
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=99.65 E-value=1.5e-15 Score=162.29 Aligned_cols=179 Identities=12% Similarity=-0.006 Sum_probs=119.9
Q ss_pred CCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHh--------h--hcCCCHHHHHHHHHhhcCCCCCCHHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFL--------P--FMGTGEANFLGGVASVKGVKGFDSEAA 146 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (1089)
+++++|+||+||||+|++... .+...+...++......+. . .-..+...+...+..... ....++.
T Consensus 2 ~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~ 77 (232)
T 3fvv_A 2 TTRRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLA--AHSPVEL 77 (232)
T ss_dssp CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH--TSCHHHH
T ss_pred CCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc--CCCHHHH
Confidence 346999999999999998653 4555555555430111110 0 011122333322222111 2233333
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcC----------
Q 001380 147 KKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSAD---------- 216 (1089)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~---------- 216 (1089)
.+.+.+.+.+.+ .. .++||+.++|+.|+++|++++|+||+....++.+++.+|+. .++...+..+
T Consensus 78 ~~~~~~~~~~~~-~~---~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~ 152 (232)
T 3fvv_A 78 AAWHEEFMRDVI-RP---SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ-HLIATDPEYRDGRYTGRIEG 152 (232)
T ss_dssp HHHHHHHHHHTT-GG---GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC-EEEECEEEEETTEEEEEEES
T ss_pred HHHHHHHHHHhh-hh---hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-EEEEcceEEECCEEeeeecC
Confidence 333333333222 21 57999999999999999999999999999999999999996 6654332211
Q ss_pred CccCCCCCHHHHHHHHHHcC---CCCCcEEEEcCChhhHHHHHHcCCeEEE
Q 001380 217 AFENLKPAPDIFLSASKILN---VPTSECIVIEDALAGVQAAKAAQMRCIA 264 (1089)
Q Consensus 217 ~~~~~KP~~~~~~~~l~~lg---v~p~~~v~VGD~~~Di~aA~~aG~~~i~ 264 (1089)
....+++++..++.+++++| +++++|+||||+.+|+.+++.+|+.++.
T Consensus 153 ~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 153 TPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAA 203 (232)
T ss_dssp SCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence 22335778899999999999 9999999999999999999999977654
No 246
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=99.64 E-value=3.1e-17 Score=179.45 Aligned_cols=121 Identities=16% Similarity=0.243 Sum_probs=101.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHhH--HHHHHH-CCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCC
Q 001380 164 GIGFPGALELINQCKSKGLKVAVASSADRIKV--DANLAA-AGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTS 240 (1089)
Q Consensus 164 ~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~--~~~l~~-~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~ 240 (1089)
..++|++.++++.|+ +|+++ |+||.+.... ...+.. .++. .+|+.++++++...+||+|.+|+.++++ ++|+
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~-~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~ 203 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSII-AALKVATNVEPIIIGKPNEPMYEVVREM--FPGE 203 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHH-HHHHHHHCCCCEECSTTSHHHHHHHHHH--STTC
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHH-HHHHHHhCCCccEecCCCHHHHHHHHHh--CCcc
Confidence 367899999999999 89998 9999876443 222222 3453 6688888888888999999999999999 9999
Q ss_pred cEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHHhhc--CCcEEecCcccC
Q 001380 241 ECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERLKEA--SPSLIRKEIGSV 289 (1089)
Q Consensus 241 ~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l~~~--~~d~vi~dl~el 289 (1089)
+++||||++ +||.+|+++||++++|.+|. ..+++... .|+++++++.++
T Consensus 204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el 256 (263)
T 1zjj_A 204 ELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL 256 (263)
T ss_dssp EEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred cEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 999999997 99999999999999999987 45666543 799999999988
No 247
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=99.64 E-value=2.5e-16 Score=160.89 Aligned_cols=102 Identities=15% Similarity=0.196 Sum_probs=90.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC---------------ChHhHHHHHHHCCCCCCCccEEEEc-----CCccCCCCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSA---------------DRIKVDANLAAAGLPVSMFDAIVSA-----DAFENLKPA 224 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~---------------~~~~~~~~l~~~gl~~~~fd~i~~~-----~~~~~~KP~ 224 (1089)
.++||+.++|+.|+++|++++|+||. ....++..++.+|+. |+.++.+ ++....||+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP~ 118 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKPK 118 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTTS
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCCC
Confidence 68999999999999999999999998 577889999999995 8988754 778889999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCC
Q 001380 225 PDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 225 ~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~ 269 (1089)
|++|+.+++++|++|++|+||||+.+|+++|+++||++++|.++.
T Consensus 119 p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 119 VKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp CGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 999999999999999999999999999999999999999998874
No 248
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.64 E-value=2.5e-14 Score=159.81 Aligned_cols=208 Identities=15% Similarity=0.168 Sum_probs=156.2
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~ 735 (1089)
+..+.|.+++++|+.||++|..+++|.+++.+ +.++.+.... ..|.+++++++| .||+++.
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~-----------------~~~~gl~~d~dG-~l~v~~~ 104 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDVLLDAT-----------------AFTNGNAVDAQQ-RLVHCEH 104 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEEEEESC-----------------SCEEEEEECTTS-CEEEEET
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEEEeCCC-----------------CccceeeECCCC-CEEEEEC
Confidence 44789999999999999999999999999984 5566664211 368999999988 6999999
Q ss_pred CCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeC-----------------CCCeEE
Q 001380 736 GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS-----------------ESSSIR 798 (1089)
Q Consensus 736 ~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~-----------------~~~~I~ 798 (1089)
+.++|.+++++ |..+.+..... ...+..|++|+++++| .+|++|. ..+.|+
T Consensus 105 ~~~~v~~~~~~-g~~~~~~~~~~----------~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~ 172 (305)
T 3dr2_A 105 GRRAITRSDAD-GQAHLLVGRYA----------GKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVY 172 (305)
T ss_dssp TTTEEEEECTT-SCEEEEECEET----------TEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEE
T ss_pred CCCEEEEECCC-CCEEEEEeccC----------CCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEE
Confidence 98999999987 66666653210 1335679999999998 8999874 136799
Q ss_pred EEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCC-----CEEEEEeCCCCeEEE
Q 001380 799 ALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYN-----HKIKKLDPASNRVST 872 (1089)
Q Consensus 799 ~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n-----~~I~~~d~~~~~v~t 872 (1089)
+++++++....+. + +..|.|++++++|+ |||+|+.+ ++|.+++.+++.+..
T Consensus 173 ~~d~~~g~~~~~~-~----------------------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~ 229 (305)
T 3dr2_A 173 RLPPDGSPLQRMA-D----------------------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHD 229 (305)
T ss_dssp EECSSSCCCEEEE-E----------------------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEE
T ss_pred EEcCCCCcEEEEe-c----------------------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccC
Confidence 9998766655442 1 45799999999996 99999874 899999876554321
Q ss_pred EeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCceEEEEe
Q 001380 873 LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 873 ~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
..... ......|.||++|++|+|||+. .+.|.++++++. .+.++.
T Consensus 230 ~~~~~----------~~~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g~--~~~~~~ 274 (305)
T 3dr2_A 230 RRHFA----------SVPDGLPDGFCVDRGGWLWSSS--GTGVCVFDSDGQ--LLGHIP 274 (305)
T ss_dssp EEEEE----------CCSSSCCCSEEECTTSCEEECC--SSEEEEECTTSC--EEEEEE
T ss_pred CeEEE----------ECCCCCCCeEEECCCCCEEEec--CCcEEEECCCCC--EEEEEE
Confidence 11000 0012459999999999999998 457999999776 555554
No 249
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.64 E-value=3.2e-13 Score=155.80 Aligned_cols=246 Identities=23% Similarity=0.388 Sum_probs=191.4
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
.|..+++++.+..||++....+.|.++|.. |+.+..+... ..+.+++++++|+.||++...++.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~---------------~~v~~~~~spdg~~l~~~~~~~~~ 97 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG---------------SSPQGVAVSPDGKQVYVTNMASST 97 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS---------------SSEEEEEECTTSSEEEEEETTTTE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC---------------CCccceEECCCCCEEEEEECCCCE
Confidence 367899998666788999888999999985 6666666543 167999999999999999988899
Q ss_pred EEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccc
Q 001380 681 LREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYER 760 (1089)
Q Consensus 681 I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~ 760 (1089)
|+.+|..++........+ ..+.+++++++++.||++....+.|+.||..++........+
T Consensus 98 v~v~d~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--- 157 (391)
T 1l0q_A 98 LSVIDTTSNTVAGTVKTG-----------------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--- 157 (391)
T ss_dssp EEEEETTTTEEEEEEECS-----------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC---
T ss_pred EEEEECCCCeEEEEEeCC-----------------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC---
Confidence 999999988766554322 257899999999999999999999999999888765443211
Q ss_pred cCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCce
Q 001380 761 NLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840 (1089)
Q Consensus 761 ~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~ 840 (1089)
..|.+++++++|+.||++....+.|+.+++.++........ -..+.
T Consensus 158 ------------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----------------------~~~~~ 203 (391)
T 1l0q_A 158 ------------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV----------------------EAAPS 203 (391)
T ss_dssp ------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----------------------SSEEE
T ss_pred ------------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec----------------------CCCcc
Confidence 24789999999999999999999999999987654433211 12478
Q ss_pred EEEEccCCc-EEEEeC--CCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECCCCEEE
Q 001380 841 GVYCAKNGQ-IYVADS--YNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIR 916 (1089)
Q Consensus 841 gva~~~~G~-lyVaD~--~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~ 916 (1089)
+++++++|+ +|++.. .++.|+.+|..++.+...... -..|.+++++++|+ ||++...+++|+
T Consensus 204 ~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~--------------~~~~~~~~~s~dg~~l~~s~~~d~~v~ 269 (391)
T 1l0q_A 204 GIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV--------------GPDPAGIAVTPDGKKVYVALSFXNTVS 269 (391)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC--------------CSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec--------------CCCccEEEEccCCCEEEEEcCCCCEEE
Confidence 899999984 788876 789999999987765443321 12478899999885 889999999999
Q ss_pred EEeCCCCCceEEEEe
Q 001380 917 YLDLNKEEPELQTLE 931 (1089)
Q Consensus 917 ~~~~~~~~~~~~~l~ 931 (1089)
++++... ..+.++.
T Consensus 270 v~d~~~~-~~~~~~~ 283 (391)
T 1l0q_A 270 VIDTATN-TITATMA 283 (391)
T ss_dssp EEETTTT-EEEEEEE
T ss_pred EEECCCC-cEEEEEE
Confidence 9999876 2344444
No 250
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.63 E-value=4.1e-16 Score=156.26 Aligned_cols=125 Identities=14% Similarity=0.086 Sum_probs=105.9
Q ss_pred cCCCCCCCCCCccccCCCC------C--ceeeccccc-CCCEE-EEEEecCCCcchhh-hhhhHHHHHHHcCCCCE-EEE
Q 001380 423 NRKTTPIVPEFPAKLDWLN------T--APLQFRRDL-KGKVV-VLDFWTYCCINCMH-VLPDLEFLEKKYKDMPF-TVV 490 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~------g--~~~~l~~~~-~gk~v-ll~Fwa~wC~~C~~-~~p~l~~l~~~~~~~~v-~vi 490 (1089)
..++|+++|+.++..-.-+ + ++++| +++ +||++ |++||+.|||.|.. |+|.|++++++|+++|+ .||
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsL-sd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~Vi 87 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSV-RDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIW 87 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEH-HHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeH-HHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 3579999999886532111 1 47889 786 99965 55677999999999 99999999999999999 999
Q ss_pred EEeCCCCCChhcHHHHHHHHHHcCCc--cceeecCChhHHHHhCCC-----------ceeEEEEECCCCcEEEEecCC
Q 001380 491 GVHSAKFDNEKDLEAIRNAVLRYGIS--HPVVNDGDMNLWRELGVN-----------SWPTFAVVGPNGKLLAQLAGE 555 (1089)
Q Consensus 491 ~v~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~G~ 555 (1089)
+||. +++...++|.++++++ ||++.|.+.+++++||+. ..|++||| ++|+|++.+.++
T Consensus 88 gIS~------D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~~~ 158 (176)
T 4f82_A 88 CVSV------NDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAVEA 158 (176)
T ss_dssp EEES------SCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEECC
T ss_pred EEeC------CCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEEcC
Confidence 9986 5788899999999999 999999999999999984 25899999 999999997754
No 251
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.63 E-value=1.5e-13 Score=157.15 Aligned_cols=268 Identities=12% Similarity=0.108 Sum_probs=175.6
Q ss_pred CCCCCceEEEeecCCeEEEEeC---CCCEEEEE--eCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEE
Q 001380 599 PLKFPGKLAIDILNNRLFISDS---NHNRIVVT--DLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYV 673 (1089)
Q Consensus 599 ~l~~P~~vavd~~~g~L~vsd~---~~~~I~~~--~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyV 673 (1089)
....|..+++++.+..||+++. .+++|.++ +.++..+..+...... -..|.++++ +|+.||+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~-----------~~~p~~~~~--dg~~l~~ 114 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM-----------GADPCYLTT--NGKNIVT 114 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS-----------SSCEEEEEE--CSSEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC-----------CCCcEEEEE--CCCEEEE
Confidence 3467889999996667999987 35677655 4442333333221011 137889998 7888999
Q ss_pred EECCCCEEEEEECCC-CeEEEEe----cCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCC-
Q 001380 674 ADTENHALREIDFVN-DTVRTLA----GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD- 747 (1089)
Q Consensus 674 aD~~n~~I~~~d~~~-g~v~~~a----g~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~- 747 (1089)
++..++.|..+++.. +.+..+. -.|. +.....+....|++++++|+|+.||+++.+.+.|+.|+...
T Consensus 115 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 115 ANYSGGSITVFPIGQDGALLPASDVIEFKGS-------GPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp EETTTTEEEEEEBCTTSCBCSCSEEEECCCC-------CSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EECCCCEEEEEEeCCCCcCcccceeEEccCC-------CCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 999899999999863 3332221 1111 11112233457899999999999999999999888876543
Q ss_pred -C----e-EEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCc
Q 001380 748 -G----V-TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNL 821 (1089)
Q Consensus 748 -g----~-~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l 821 (1089)
+ . +.......... ......|.+++++|+|+.||+++..+++|+.++.+++....+....
T Consensus 188 ~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~------- 252 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFK--------VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA------- 252 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEE--------CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE-------
T ss_pred CCcccccceeeccccccee--------cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe-------
Confidence 2 1 21110000000 0112358899999999999999998999999998866543332100
Q ss_pred cccCCCCCccccccccCceEEEEccCCc-EEEEeCC-CCEEEEEeC--CCCeEEEEeccCCCCCCCCcccccccCCCceE
Q 001380 822 FKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSY-NHKIKKLDP--ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI 897 (1089)
Q Consensus 822 ~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~-n~~I~~~d~--~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi 897 (1089)
. .......|.++++++||+ ||+++.. .+.|..++. .++.+..+..... -..|.++
T Consensus 253 ----~-----~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~------------g~~~~~~ 311 (361)
T 3scy_A 253 ----A-----DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT------------GIHPRNF 311 (361)
T ss_dssp ----S-----CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC------------SSCCCEE
T ss_pred ----c-----CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC------------CCCCceE
Confidence 0 001134678999999996 8999988 788888654 4666554432110 1359999
Q ss_pred EEccCCc-EEEEECCCCEEEEEeCCC
Q 001380 898 IEAQNGN-LFIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 898 ~vd~~G~-lyVad~~n~~I~~~~~~~ 922 (1089)
+++++|+ ||+++..+++|.++..+.
T Consensus 312 ~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 312 IITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEECCCCCEEEEEEEC
Confidence 9999996 999998899999965553
No 252
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=99.63 E-value=1.9e-17 Score=172.70 Aligned_cols=182 Identities=18% Similarity=0.171 Sum_probs=132.7
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDK 157 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1089)
++++|+|||||||+|+...+..++.++++++ ...+.+++. +.+....+.. . .. . ...++.+.|.+.
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~----~--~~-~---~~~~~~~~~~~~ 68 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQ-PFIALEDRR---GFWVSEQYGR----L--RP-G---LSEKAISIWESK 68 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTS-CCCCGGGCC---SSCHHHHHHH----H--ST-T---HHHHHHHHHTST
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcC-CCCCHHHhc---CCcHHHHHHh----c--CH-H---HHHHHHHHHHhh
Confidence 4689999999999999999999999998877 334444432 2233332222 1 11 1 122333333332
Q ss_pred hcCCCCCCCCccHHHHHHHHHhC-CCeEEEEcCCChHhHHHHHHHCCCCCC-CccEEEEcCCccCCCCCHHHHHHHHHHc
Q 001380 158 YAKPNSGIGFPGALELINQCKSK-GLKVAVASSADRIKVDANLAAAGLPVS-MFDAIVSADAFENLKPAPDIFLSASKIL 235 (1089)
Q Consensus 158 ~~~~~~~~~~pG~~~lL~~Lk~~-Gi~vaIvSn~~~~~~~~~l~~~gl~~~-~fd~i~~~~~~~~~KP~~~~~~~~l~~l 235 (1089)
.. .....++||+.++|+.|+++ |++++|+||+.+..++..++++|+. . +|+ ..+++++
T Consensus 69 ~~-~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~-~~~f~------------------~~~~~~l 128 (197)
T 1q92_A 69 NF-FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV-EKYFG------------------PDFLEQI 128 (197)
T ss_dssp TT-TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH-HHHHC------------------GGGGGGE
T ss_pred hh-hhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH-HHhch------------------HHHHHHh
Confidence 11 11347899999999999999 9999999999988888899999985 6 775 5688999
Q ss_pred CCCCCcEEEEcCChhh----HHHHH-HcCCeEEEEcCCCCHHHHhhcCCcE-EecCcc-cCCHHHHHhc
Q 001380 236 NVPTSECIVIEDALAG----VQAAK-AAQMRCIAVTTTLSEERLKEASPSL-IRKEIG-SVSLNDILTG 297 (1089)
Q Consensus 236 gv~p~~~v~VGD~~~D----i~aA~-~aG~~~i~V~~g~~~~~l~~~~~d~-vi~dl~-el~i~~ll~~ 297 (1089)
|+.|++|+||||+..| +.+|+ ++||.+|++.++.... ....+++ .+.++. ++ ..+|+.
T Consensus 129 ~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~--~~~~~~~~~v~~~~~~l--~~~l~~ 193 (197)
T 1q92_A 129 VLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQH--LQLQPPRRRLHSWADDW--KAILDS 193 (197)
T ss_dssp EECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTT--CCCCTTCEEECCTTSCH--HHHHHT
T ss_pred ccCCccEEEECcccccCCchhhhcccCCCceEEEecCccccc--ccccccchhhhhHHHHH--HHHhcc
Confidence 9999999999999988 99999 9999999998875432 1223444 688884 55 666653
No 253
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=99.62 E-value=1.3e-17 Score=173.23 Aligned_cols=180 Identities=17% Similarity=0.132 Sum_probs=129.1
Q ss_pred ceEEEEecCCcccCCchHHHHHHHHHHHHcCCC-CCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 001380 79 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVE-VTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLDK 157 (1089)
Q Consensus 79 ~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1089)
.++|+||+||||+|+...+..++.++++ |++ .+.+++..+. ....+..+ .. +..+++.+.|.+.
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~~---~~~~~~~~-----~~-----~~~~~~~~~~~~~ 66 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGFL---AREQYRAL-----RP-----DLADKVASVYEAP 66 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSSC---HHHHHHHH-----CT-----THHHHHHHHHTST
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHhh---HHHHHHHH-----hH-----HHHHHHHHHHHhc
Confidence 4799999999999999999999998887 775 5555554332 12222221 11 1233444444332
Q ss_pred hcCCCCCCCCccHHHHHHHHHhC-CCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcC
Q 001380 158 YAKPNSGIGFPGALELINQCKSK-GLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILN 236 (1089)
Q Consensus 158 ~~~~~~~~~~pG~~~lL~~Lk~~-Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lg 236 (1089)
.. .....++||+.++|+.|+++ |++++|+||+....++..++++|+ ||.+++++ +++++|
T Consensus 67 ~~-~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl----f~~i~~~~--------------~~~~~~ 127 (193)
T 2i7d_A 67 GF-FLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW----VEQHLGPQ--------------FVERII 127 (193)
T ss_dssp TT-TTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH----HHHHHCHH--------------HHTTEE
T ss_pred Cc-cccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc----hhhhcCHH--------------HHHHcC
Confidence 11 11347899999999999999 999999999998888899998887 67666542 789999
Q ss_pred CCCCcEEEEcCChhh----HHHHH-HcCCeEEEEcCCCCHHHHhhcCCcE-EecCcccCCHHHHH
Q 001380 237 VPTSECIVIEDALAG----VQAAK-AAQMRCIAVTTTLSEERLKEASPSL-IRKEIGSVSLNDIL 295 (1089)
Q Consensus 237 v~p~~~v~VGD~~~D----i~aA~-~aG~~~i~V~~g~~~~~l~~~~~d~-vi~dl~el~i~~ll 295 (1089)
++|++|+||||+..| +.+|+ ++||+++++.++.... ....+++ .+.++.+. +..+|
T Consensus 128 ~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~--~~~~~~~~~v~~~~~~-~~~~~ 189 (193)
T 2i7d_A 128 LTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRH--LVLPPTRRRLLSWSDN-WREIL 189 (193)
T ss_dssp ECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTT--CCCCTTSCEECSTTSC-HHHHH
T ss_pred CCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcc--cccccchHHHhhHHHH-HHHHh
Confidence 999999999999988 99999 9999999998754221 1123444 57888443 24444
No 254
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=1.5e-13 Score=151.14 Aligned_cols=238 Identities=15% Similarity=0.099 Sum_probs=177.4
Q ss_pred CCeEEEEeCCCCEEEEEeC-CCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCe
Q 001380 612 NNRLFISDSNHNRIVVTDL-DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDT 690 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~-~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~ 690 (1089)
.++++++++++++|..+|. +|+.+.++...+. ..++.++++|+|+ +|++ .++.|+.+|+++..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~-------------~~~~~~~~~pdG~-ilvs--~~~~V~~~d~~G~~ 67 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG-------------WECNSVAATKAGE-ILFS--YSKGAKMITRDGRE 67 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTT-------------CCCCEEEECTTSC-EEEE--CBSEEEEECTTSCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc-------------CCCcCeEECCCCC-EEEe--CCCCEEEECCCCCE
Confidence 4689999999999999999 7999988876421 2578999999999 6774 47899999997667
Q ss_pred EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEEEeCCCccccCCCCCCCC
Q 001380 691 VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLN 769 (1089)
Q Consensus 691 v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~ 769 (1089)
+..+.. +.. ...+++.+.++| .++|++.+ +++|+.+++++..+..+...+.. .
T Consensus 68 ~W~~~~-~~~---------------~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~---------~ 121 (276)
T 3no2_A 68 LWNIAA-PAG---------------CEMQTARILPDG-NALVAWCGHPSTILEVNMKGEVLSKTEFETGI---------E 121 (276)
T ss_dssp EEEEEC-CTT---------------CEEEEEEECTTS-CEEEEEESTTEEEEEECTTSCEEEEEEECCSC---------S
T ss_pred EEEEcC-CCC---------------ccccccEECCCC-CEEEEecCCCCEEEEEeCCCCEEEEEeccCCC---------C
Confidence 777653 100 134677888888 67777777 89999999977766666532110 1
Q ss_pred ccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc
Q 001380 770 TSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ 849 (1089)
Q Consensus 770 ~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~ 849 (1089)
..+..|.+++++++| .+++++..+++|..+++++..+..+..+ ..|.++.+.++|+
T Consensus 122 ~~~~~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~G~~~w~~~~~-----------------------~~~~~~~~~~~g~ 177 (276)
T 3no2_A 122 RPHAQFRQINKNKKG-NYLVPLFATSEVREIAPNGQLLNSVKLS-----------------------GTPFSSAFLDNGD 177 (276)
T ss_dssp SGGGSCSCCEECTTS-CEEEEETTTTEEEEECTTSCEEEEEECS-----------------------SCCCEEEECTTSC
T ss_pred cccccccCceECCCC-CEEEEecCCCEEEEECCCCCEEEEEECC-----------------------CCccceeEcCCCC
Confidence 234568899999998 7888999999999999984333233110 2578889999999
Q ss_pred EEEEeCCCCEEEEEeCC-CCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECC----------CCEEEEE
Q 001380 850 IYVADSYNHKIKKLDPA-SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN----------NNIIRYL 918 (1089)
Q Consensus 850 lyVaD~~n~~I~~~d~~-~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~----------n~~I~~~ 918 (1089)
++|++..+++|..+|++ +..+-++...... ...+..|.++++.++|++||+++. +.++..+
T Consensus 178 ~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~--------~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~ 249 (276)
T 3no2_A 178 CLVACGDAHCFVQLNLESNRIVRRVNANDIE--------GVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEI 249 (276)
T ss_dssp EEEECBTTSEEEEECTTTCCEEEEEEGGGSB--------SCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEE
T ss_pred EEEEeCCCCeEEEEeCcCCcEEEEecCCCCC--------CccccccccceEcCCCCEEEEeccCccccccccCCceEEEE
Confidence 99999999999999999 5555666532111 115778999999999999999963 3467778
Q ss_pred eCCCC
Q 001380 919 DLNKE 923 (1089)
Q Consensus 919 ~~~~~ 923 (1089)
+.+++
T Consensus 250 ~~~g~ 254 (276)
T 3no2_A 250 DSEGK 254 (276)
T ss_dssp CTTSB
T ss_pred CCCCC
Confidence 87775
No 255
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=99.62 E-value=3.4e-17 Score=183.33 Aligned_cols=130 Identities=16% Similarity=0.242 Sum_probs=105.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHhH--H-HHHHHCC-CCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCC
Q 001380 164 GIGFPGALELINQCKSKGLKVAVASSADRIKV--D-ANLAAAG-LPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPT 239 (1089)
Q Consensus 164 ~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~--~-~~l~~~g-l~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p 239 (1089)
..++|++.++++.|++.|+ ++|+||...... . ..++.+| +. .+|+.+++.++...+||++.+|+.+++++|++|
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~-~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~ 232 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLA-AAVETASGRQALVVGKPSPYMFECITENFSIDP 232 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHH-HHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCG
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHH-HHHHHHhCCCceeeCCCCHHHHHHHHHHcCCCh
Confidence 3568999999999999999 999999865443 1 2223333 43 567777888888899999999999999999999
Q ss_pred CcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHHhh--------cCCcEEecCcccCCHHHHHhc
Q 001380 240 SECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERLKE--------ASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 240 ~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l~~--------~~~d~vi~dl~el~i~~ll~~ 297 (1089)
++|+||||++ +|+++|+++|+.+++|.+|. ..+++.+ ..|+++++++.++ .+++..
T Consensus 233 ~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el--~~~l~~ 298 (306)
T 2oyc_A 233 ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL--TEGLED 298 (306)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGG--GGGC--
T ss_pred HHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHH--HHHHHh
Confidence 9999999997 99999999999999999987 4455543 5899999999988 444443
No 256
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.62 E-value=7.7e-17 Score=177.04 Aligned_cols=122 Identities=20% Similarity=0.236 Sum_probs=98.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHH---HHHHCCCCCCCccEEEEcCC-ccCCCCCHHHHHHHHHHcCCCCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDA---NLAAAGLPVSMFDAIVSADA-FENLKPAPDIFLSASKILNVPTS 240 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~---~l~~~gl~~~~fd~i~~~~~-~~~~KP~~~~~~~~l~~lgv~p~ 240 (1089)
.+++++.++++.| +.|+++ ++||........ .++..++. .+|+.+++.+. ...+||++.+|+.+++++|++++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~ 213 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIM-AAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE 213 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHH-HHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHH-HHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence 5688999999999 788998 999975432211 12222343 55677777777 88999999999999999999999
Q ss_pred cEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHHhh--cCCcEEecCcccC
Q 001380 241 ECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERLKE--ASPSLIRKEIGSV 289 (1089)
Q Consensus 241 ~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l~~--~~~d~vi~dl~el 289 (1089)
+|+||||++ +|+++|+.+|+.+++|.+|. ..+++.. ..|+++++++.++
T Consensus 214 e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el 266 (271)
T 1vjr_A 214 RMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL 266 (271)
T ss_dssp GEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence 999999995 99999999999999999987 4555654 3899999999887
No 257
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.61 E-value=6.7e-16 Score=175.12 Aligned_cols=191 Identities=16% Similarity=0.142 Sum_probs=129.4
Q ss_pred CCCceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHH
Q 001380 76 WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKG-VKGFDSEAAKKRFFEIY 154 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 154 (1089)
+...++|+||+||||++. ..+.++++.+|.......+..........+...+..... +.. ...... +.+
T Consensus 104 i~~~~~viFD~DgTLi~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~----~~~ 173 (335)
T 3n28_A 104 LTKPGLIVLDMDSTAIQI-----ECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKD-APEQIL----SQV 173 (335)
T ss_dssp TTSCCEEEECSSCHHHHH-----HHHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTT-CBTTHH----HHH
T ss_pred ccCCCEEEEcCCCCCcCh-----HHHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCHHHH----HHH
Confidence 345699999999999983 355566666665433333322211111111111111111 111 111111 111
Q ss_pred HHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEE----------cCCccCCCCC
Q 001380 155 LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVS----------ADAFENLKPA 224 (1089)
Q Consensus 155 ~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~----------~~~~~~~KP~ 224 (1089)
. .. .+++||+.++|+.|+++|++++|+||+....++.+++++|+. .+|+..+. .+++...||+
T Consensus 174 ~----~~--~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~-~~~~~~l~~~d~~~tg~~~~~~~~~kpk 246 (335)
T 3n28_A 174 R----ET--LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD-YAQSNTLEIVSGKLTGQVLGEVVSAQTK 246 (335)
T ss_dssp H----TT--CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEESCCCCHHHH
T ss_pred H----Hh--CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC-eEEeeeeEeeCCeeeeeecccccChhhh
Confidence 1 11 268999999999999999999999999999999999999996 77765432 2345667999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 225 PDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 225 ~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
+++|+.+++++|+++++|+||||+.+|+.||+++|+.+++ . ..+.++ ..+++++ +..++
T Consensus 247 ~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~--~~~~~~-~~a~~v~-~~~~l 305 (335)
T 3n28_A 247 ADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--H--AKPKVE-AKAQTAV-RFAGL 305 (335)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--S--CCHHHH-TTSSEEE-SSSCT
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--C--CCHHHH-hhCCEEE-ecCCH
Confidence 9999999999999999999999999999999999987665 2 233333 3577777 44454
No 258
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.60 E-value=1.2e-13 Score=154.79 Aligned_cols=265 Identities=15% Similarity=0.230 Sum_probs=163.8
Q ss_pred CCCCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeC---CC
Q 001380 594 RLFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK---KN 669 (1089)
Q Consensus 594 ~~~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~---g~ 669 (1089)
+.+++.|..|++|++.+ +|+|||++...++|.+++.+ |+. ..+..... -+ ......|.||+++|+ +.
T Consensus 25 ~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~-~~v~~~~~-v~------~~g~~GllGia~~Pdf~~~g 95 (347)
T 3das_A 25 RTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRK-TELGEVPG-VS------PSGEGGLLGIALSPDYASDH 95 (347)
T ss_dssp EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCE-EEEEECTT-CC------CBTTBSEEEEEECTTHHHHC
T ss_pred EEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcE-eeecccCc-ee------ecCCCCceeeEeccccccCC
Confidence 35678999999999997 88999999988999999876 543 33322100 00 011347899999984 45
Q ss_pred EEEEEEC--CCCEEEEEECCCC--------eEEEEe-cCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC---
Q 001380 670 LLYVADT--ENHALREIDFVND--------TVRTLA-GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA--- 735 (1089)
Q Consensus 670 ~lyVaD~--~n~~I~~~d~~~g--------~v~~~a-g~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~--- 735 (1089)
.|||+.+ ..++|.++.++++ ..+++. +... ....+...|+|+|+| .|||+..
T Consensus 96 ~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~-------------~~~H~g~~l~fgpDG-~Lyvt~Gd~~ 161 (347)
T 3das_A 96 MVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK-------------GVIHNGGRIAFGPDK-MLYAGTGESG 161 (347)
T ss_dssp EEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC-------------CSSCCCCCEEECTTS-CEEEECBCTT
T ss_pred EEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC-------------CCCccCccccCCCCC-CEEEEECCCC
Confidence 5999764 4578999987652 122221 1110 112366789999988 8999953
Q ss_pred ----------CCcEEEEEECCCCeEEEEeCCCccccCC-CCCCCCccccCCceEEEcCCCCEEEEEeCCCCe---EEEEE
Q 001380 736 ----------GQHQIWEHSTVDGVTRAFSGDGYERNLN-GSSSLNTSFAQPSGISLSPDFMEIYVADSESSS---IRALN 801 (1089)
Q Consensus 736 ----------~~~~I~~~~~~~g~~~~~~g~g~~~~~~-g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~---I~~~~ 801 (1089)
..++|+++++++.. . ..+.. +......++.+|.||+++++| .||++|.+... |.++.
T Consensus 162 ~~~~~qd~~~~~G~IlRi~~dG~i----p----~~nPf~~~~i~a~G~RNp~Gla~dp~G-~L~~~d~g~~~~deln~i~ 232 (347)
T 3das_A 162 DTGLSQDRKSLGGKILRMTPDGEP----A----PGNPFPGSPVYSYGHRNVQGLAWDDKQ-RLFASEFGQDTWDELNAIK 232 (347)
T ss_dssp CGGGTTCTTCSTTCEEEECTTSSB----C----TTCSSTTCCEEEBCCSBCCEEEECTTC-CEEEEECCSSSCEEEEEEC
T ss_pred CCccccCCCCCCCEEEEEeCCCCc----c----CCCCCCCCeEEeeCCCCcceEEECCCC-CEEEEecCCCCCceeeEEc
Confidence 24678888765431 0 00000 111123567899999999986 99999987643 33332
Q ss_pred cCCCCeEEEecCCCCCCCCccccCCCCCccc---ccc----ccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEe
Q 001380 802 LKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS---EVL----LQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLA 874 (1089)
Q Consensus 802 ~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~---~~~----l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~ 874 (1089)
.|+...++. ..|..+.... ... ...|.|+++. +|.+|+++..+++|.++..+++.. +
T Consensus 233 ---------~G~nyGwP~---~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~--~- 296 (347)
T 3das_A 233 ---------PGDNYGWPE---AEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAA--A- 296 (347)
T ss_dssp ---------TTCBCCTTT---CCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEE--S-
T ss_pred ---------CCCEecCCc---ccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCce--e-
Confidence 222222221 1111111000 001 1358899997 689999999999999987654421 0
Q ss_pred ccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCC
Q 001380 875 GIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912 (1089)
Q Consensus 875 g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n 912 (1089)
+. ...+ ....+.+|.+|+++++|.|||++.+.
T Consensus 297 ~~-~e~~-----l~~~~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 297 AD-PQAF-----LEGEYGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp SC-CEEE-----STTTSSCEEEEEEEETTEEEEEECTT
T ss_pred cc-eEEe-----ecCCCCCccEEEECCCCcEEEEEcCC
Confidence 00 0000 11145689999999999999997643
No 259
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.60 E-value=8e-14 Score=157.36 Aligned_cols=213 Identities=8% Similarity=0.131 Sum_probs=158.6
Q ss_pred CCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC
Q 001380 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG 736 (1089)
Q Consensus 657 ~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~ 736 (1089)
..|.+++++++|+ ||++++.++.|+++|++++.+..+.... -..|.+++++++| .+|++..+
T Consensus 45 ~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~~~~----------------~~~~~~i~~~~dg-~l~v~~~~ 106 (333)
T 2dg1_A 45 LQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPFVSH----------------KANPAAIKIHKDG-RLFVCYLG 106 (333)
T ss_dssp CCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECS----------------SSSEEEEEECTTS-CEEEEECT
T ss_pred ccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEeeCC----------------CCCcceEEECCCC-cEEEEeCC
Confidence 4689999999998 9999999999999999988877764211 1378999999987 79999877
Q ss_pred C----cEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC------CCeEEEEEcCCCC
Q 001380 737 Q----HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE------SSSIRALNLKTGG 806 (1089)
Q Consensus 737 ~----~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~------~~~I~~~~~~~~~ 806 (1089)
. +.|+++|+.++....+.... .....|.+|+++++| ++|+++.. .+.|++++++++.
T Consensus 107 ~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 107 DFKSTGGIFAATENGDNLQDIIEDL------------STAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp TSSSCCEEEEECTTSCSCEEEECSS------------SSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CCCCCceEEEEeCCCCEEEEEEccC------------ccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCE
Confidence 6 79999999888766443211 012368899999998 89999875 4689999887655
Q ss_pred eEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCC--CCeEEEEeccCCCCCCC
Q 001380 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPA--SNRVSTLAGIGKAGFKD 883 (1089)
Q Consensus 807 ~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~--~~~v~t~~g~g~~g~~~ 883 (1089)
...+.. .+..|.+++++++|+ +||+++.+++|.++|.+ ++.+..+.......+
T Consensus 174 ~~~~~~----------------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~-- 229 (333)
T 2dg1_A 174 VTPIIQ----------------------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF-- 229 (333)
T ss_dssp EEEEEE----------------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC--
T ss_pred EEEeec----------------------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEec--
Confidence 544321 134689999999996 99999999999999984 334443321000000
Q ss_pred CcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCceEEEEe
Q 001380 884 GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 884 g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
.....|.+|++|++|+|||++..+++|.++++++. .+.++.
T Consensus 230 -----~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~--~~~~~~ 270 (333)
T 2dg1_A 230 -----TGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY--PIGQIL 270 (333)
T ss_dssp -----CSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSC--EEEEEE
T ss_pred -----CCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCC--EEEEEE
Confidence 01246899999999999999998999999999765 455554
No 260
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.59 E-value=8.3e-13 Score=148.72 Aligned_cols=258 Identities=13% Similarity=0.140 Sum_probs=176.1
Q ss_pred CCCceEEEeecCCeEEEEeCCCCEEEEEeCC---CCEE--EEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEE
Q 001380 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLD---GNFI--VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~---g~~~--~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD 675 (1089)
..|..+++++.+..||+++...++|.+++.+ |+.. ..+... ..|.+++++++|+.||+++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~~~~ 102 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP---------------GSLTHISTDHQGQFVFVGS 102 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS---------------SCCSEEEECTTSSEEEEEE
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC---------------CCCcEEEEcCCCCEEEEEe
Confidence 3577899998666799999887899988765 3432 222221 1689999999999999999
Q ss_pred CCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCC-CeEEEEe
Q 001380 676 TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVD-GVTRAFS 754 (1089)
Q Consensus 676 ~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~-g~~~~~~ 754 (1089)
..++.|..+++.++........-. ....|.+++++|+|+.+|+++.+.+.|+.|+..+ +.+....
T Consensus 103 ~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 103 YNAGNVSVTRLEDGLPVGVVDVVE--------------GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp TTTTEEEEEEEETTEEEEEEEEEC--------------CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred cCCCeEEEEECCCCcccccccccc--------------CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 888999999984332211111000 0125889999999999999998889999999876 6554322
Q ss_pred CCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCC--CCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 755 GDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT--GGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 755 g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~--~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
.... . ...-..|.+++++++|+.||+++...+.|..++.+. +.......... ...+
T Consensus 169 ~~~~-~--------~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~------~~~~------- 226 (343)
T 1ri6_A 169 PAEV-T--------TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM------MPEN------- 226 (343)
T ss_dssp EEEE-E--------CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEEC------SCTT-------
T ss_pred cccc-c--------cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccc------cCcc-------
Confidence 0000 0 001135789999999988999999999999999853 33321110000 0000
Q ss_pred cccccCceEEEEccCC-cEEEEeCCCCEEEEEeCC--CCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEE
Q 001380 833 EVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPA--SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIA 908 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G-~lyVaD~~n~~I~~~d~~--~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVa 908 (1089)
......|.+++++++| .+|+++..++.|.++|.. ++....+.... .-..|.+++++++|+ ||++
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~------------~~~~~~~~~~s~dg~~l~~~ 294 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP------------TETQPRGFNVDHSGKYLIAA 294 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE------------CSSSCCCEEECTTSSEEEEE
T ss_pred ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec------------CCCccceEEECCCCCEEEEe
Confidence 0012367889999999 588899889999999876 55444443211 012389999999986 8999
Q ss_pred ECCCCEEEEEeCC
Q 001380 909 DTNNNIIRYLDLN 921 (1089)
Q Consensus 909 d~~n~~I~~~~~~ 921 (1089)
+..++.|.+++++
T Consensus 295 ~~~~~~v~v~~~d 307 (343)
T 1ri6_A 295 GQKSHHISVYEIV 307 (343)
T ss_dssp CTTTCEEEEEEEE
T ss_pred cCCCCeEEEEEEc
Confidence 8888999988554
No 261
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=99.58 E-value=3.1e-16 Score=164.91 Aligned_cols=98 Identities=18% Similarity=0.157 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEc-C--CccCCCCCHHHHHHHHHHcCCCCCc
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSA-D--AFENLKPAPDIFLSASKILNVPTSE 241 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~-~--~~~~~KP~~~~~~~~l~~lgv~p~~ 241 (1089)
.+.||+.++|+.|+++|++++|+||+.....+..++. +. .+|+.++.+ + .....||+|++|.++++++|+
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~-~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~---- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LA-DNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI---- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HH-HHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HH-HhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence 3578999999999999999999999876665555555 32 455554322 1 245589999999999999998
Q ss_pred EEEEcCChhhHHHHHHcCCeEEEEcCCC
Q 001380 242 CIVIEDALAGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 242 ~v~VGD~~~Di~aA~~aG~~~i~V~~g~ 269 (1089)
|+||||+.+|+++|+++||++++|.++.
T Consensus 161 ~l~VGDs~~Di~aA~~aG~~~i~v~~g~ 188 (211)
T 2b82_A 161 RIFYGDSDNDITAARDVGARGIRILRAS 188 (211)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence 9999999999999999999999999875
No 262
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=1.1e-13 Score=154.62 Aligned_cols=208 Identities=13% Similarity=0.179 Sum_probs=154.6
Q ss_pred cCCcceeEEeeCCCEEEEE-------ECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCC
Q 001380 656 FNRPQGLAYNAKKNLLYVA-------DTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINE 728 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVa-------D~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~ 728 (1089)
+..|.+++++++|+ +|++ |+.++.|+++++.++.+..+...... .....|.+++++++++
T Consensus 17 ~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~------------~~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 17 IPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVN------------GYGGIPAGCQCDRDAN 83 (314)
T ss_dssp CTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEET------------TEECCEEEEEECSSSS
T ss_pred CCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccC------------CCCCCCceEEEecCCC
Confidence 66899999999887 9999 88889999999888888776531000 0124799999999844
Q ss_pred EEEEEECCCcEEEEEECCCCeEEEE-eCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCC-------------
Q 001380 729 KVYIAMAGQHQIWEHSTVDGVTRAF-SGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES------------- 794 (1089)
Q Consensus 729 ~lyvad~~~~~I~~~~~~~g~~~~~-~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~------------- 794 (1089)
.|||++.++ .|+++|.. +.+..+ .... .......|++|+++++| ++|+++...
T Consensus 84 ~l~v~~~~~-~l~~~d~~-g~~~~~~~~~~----------~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~ 150 (314)
T 1pjx_A 84 QLFVADMRL-GLLVVQTD-GTFEEIAKKDS----------EGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp EEEEEETTT-EEEEEETT-SCEEECCSBCT----------TSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSS
T ss_pred cEEEEECCC-CEEEEeCC-CCEEEEEeccC----------CCccccCCcCEEECCCC-CEEEEecCcccccccccccccC
Confidence 999999754 89999998 776655 3211 01234579999999998 899999865
Q ss_pred --CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEc----cCC-cEEEEeCCCCEEEEEeCC-
Q 001380 795 --SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA----KNG-QIYVADSYNHKIKKLDPA- 866 (1089)
Q Consensus 795 --~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~----~~G-~lyVaD~~n~~I~~~d~~- 866 (1089)
+.|.+++++ +....+.. .+..|.+++++ ++| .+||+++.+++|.++|.+
T Consensus 151 ~~~~l~~~~~~-g~~~~~~~----------------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~ 207 (314)
T 1pjx_A 151 KFGSIYCFTTD-GQMIQVDT----------------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG 207 (314)
T ss_dssp SCEEEEEECTT-SCEEEEEE----------------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCeEEEECCC-CCEEEecc----------------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCC
Confidence 689999876 44433321 14468999999 999 699999999999999875
Q ss_pred CCeEE---EEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCC
Q 001380 867 SNRVS---TLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 867 ~~~v~---t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~ 922 (1089)
++.+. .+..... ..+..|.+|++|++|+|||++..++.|.++++++
T Consensus 208 ~g~~~~~~~~~~~~~----------~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 208 PAKIENKKVWGHIPG----------THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp TTEEEEEEEEEECCC----------CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred CCccccceEEEECCC----------CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 45432 2221100 0114589999999999999998899999999983
No 263
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.58 E-value=3.9e-13 Score=144.83 Aligned_cols=210 Identities=13% Similarity=0.082 Sum_probs=150.5
Q ss_pred CcceeEEeeCCCEEEEEEC--CCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC
Q 001380 658 RPQGLAYNAKKNLLYVADT--ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735 (1089)
Q Consensus 658 ~P~gla~d~~g~~lyVaD~--~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~ 735 (1089)
.|+||+++++| .||++.. +.+.|+++|+.++++..-...+. -..+.|++++ ++.||++.+
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~---------------~~fgeGi~~~--g~~lyv~t~ 83 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDD---------------SYFGEGLTLL--NEKLYQVVW 83 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCT---------------TCCEEEEEEE--TTEEEEEET
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCC---------------CcceEEEEEe--CCEEEEEEe
Confidence 68999999886 5999975 47899999999887666543221 1244577776 579999999
Q ss_pred CCcEEEEEECCCCeEE-EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE-EEecC
Q 001380 736 GQHQIWEHSTVDGVTR-AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR-LLAGG 813 (1089)
Q Consensus 736 ~~~~I~~~~~~~g~~~-~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~-~~~g~ 813 (1089)
..+.++++|..+.++. .+. . . .|.|..+++||+++|+++ ++++|..+++.+..+. .+.-+
T Consensus 84 ~~~~v~viD~~t~~v~~~i~-~--------------g--~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFT-H--------------Q--MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEE-C--------------C--SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred cCCEEEEEECCCCcEEEEEE-C--------------C--CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEEC
Confidence 9999999999887654 343 1 1 244555667788999999 7899999999876643 22211
Q ss_pred CCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCC--ccccccc
Q 001380 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDG--AALAAQL 891 (1089)
Q Consensus 814 ~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g--~~~~~~l 891 (1089)
.. ...+..|.++.+. +|.+|++....+.|.+||++++.+......+. .... .......
T Consensus 146 ------------~~-----~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g--~~~~~~~~~~~~~ 205 (266)
T 2iwa_A 146 ------------YN-----GHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPN--LRKKLIDEGFRDI 205 (266)
T ss_dssp ------------ET-----TEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHH--HHHHHHHTTCTTC
T ss_pred ------------CC-----CcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCC--ccccccccccccc
Confidence 00 0124468888887 88999999999999999999887755443210 0000 0001123
Q ss_pred CCCceEEEccCC-cEEEEECCCCEEEEEeCCCC
Q 001380 892 SEPAGIIEAQNG-NLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 892 ~~P~gi~vd~~G-~lyVad~~n~~I~~~~~~~~ 923 (1089)
..|+||+++++| ++||+....++|..+++...
T Consensus 206 ~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 206 DVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 578999999877 69999999999999987554
No 264
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=99.57 E-value=5.5e-16 Score=161.29 Aligned_cols=119 Identities=19% Similarity=0.183 Sum_probs=96.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCc-cCCCCCHHHHHHHHHHcCCCCCcEE
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAF-ENLKPAPDIFLSASKILNVPTSECI 243 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~-~~~KP~~~~~~~~l~~lgv~p~~~v 243 (1089)
.++||+.++|+.|+++|++++|+||+....++.. +.+|+. .+++.+...+.. ...+|.+.....+++++ ++++|+
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i 154 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDE-FMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFIL 154 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSE-EEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCch-hheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEE
Confidence 7899999999999999999999999988888888 999996 666666655432 22456665667788888 889999
Q ss_pred EEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 244 VIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 244 ~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
+|||+.+|+.+|+.+|+. +++..+.. .+++++.++.++ .++|..
T Consensus 155 ~iGD~~~Di~~~~~ag~~-v~~~~~~~-------~ad~v~~~~~el--~~~l~~ 198 (201)
T 4ap9_A 155 AMGDGYADAKMFERADMG-IAVGREIP-------GADLLVKDLKEL--VDFIKN 198 (201)
T ss_dssp EEECTTCCHHHHHHCSEE-EEESSCCT-------TCSEEESSHHHH--HHHHHT
T ss_pred EEeCCHHHHHHHHhCCce-EEECCCCc-------cccEEEccHHHH--HHHHHH
Confidence 999999999999999996 55655422 789999999886 666654
No 265
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.57 E-value=2.4e-12 Score=148.35 Aligned_cols=235 Identities=21% Similarity=0.344 Sum_probs=182.5
Q ss_pred CeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeE
Q 001380 613 NRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTV 691 (1089)
Q Consensus 613 g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v 691 (1089)
+.+|++....+.|.+++.+ |+.+..+... ..|.+++++++|+.||++...++.|+.+|+.++.+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~ 66 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG---------------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV 66 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS---------------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC---------------CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE
Confidence 5789999999999999987 6666665443 14789999999998999988889999999988776
Q ss_pred EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCcc
Q 001380 692 RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTS 771 (1089)
Q Consensus 692 ~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~ 771 (1089)
......+ ..+.+++++|+++.||++....+.|+.||..++........+
T Consensus 67 ~~~~~~~-----------------~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-------------- 115 (391)
T 1l0q_A 67 IATVPAG-----------------SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-------------- 115 (391)
T ss_dssp EEEEECS-----------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--------------
T ss_pred EEEEECC-----------------CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC--------------
Confidence 5554222 167899999999999999988899999999988765443211
Q ss_pred ccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCC-cE
Q 001380 772 FAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QI 850 (1089)
Q Consensus 772 ~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G-~l 850 (1089)
..+.+++++++|+.||++....+.|+.++..++........ -..|.+++++++| .+
T Consensus 116 -~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----------------------~~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 116 -KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV----------------------GRSPKGIAVTPDGTKV 172 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----------------------CSSEEEEEECTTSSEE
T ss_pred -CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec----------------------CCCcceEEECCCCCEE
Confidence 24789999999989999999999999999887654332211 1247889999998 47
Q ss_pred EEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEEC--CCCEEEEEeCCCCCceE
Q 001380 851 YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADT--NNNIIRYLDLNKEEPEL 927 (1089)
Q Consensus 851 yVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~--~n~~I~~~~~~~~~~~~ 927 (1089)
|++...++.|+.+|..++.+...... -..|.+++++++|+ ||++.. .++.|.++++.+. ..+
T Consensus 173 ~~~~~~~~~v~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~-~~~ 237 (391)
T 1l0q_A 173 YVANFDSMSISVIDTVTNSVIDTVKV--------------EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN-KIT 237 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEEC--------------SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-EEE
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEec--------------CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC-eEE
Confidence 89999999999999988876554432 13478899999885 787776 7899999999876 234
Q ss_pred EEEe
Q 001380 928 QTLE 931 (1089)
Q Consensus 928 ~~l~ 931 (1089)
..+.
T Consensus 238 ~~~~ 241 (391)
T 1l0q_A 238 ARIP 241 (391)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 266
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.57 E-value=4.7e-13 Score=154.73 Aligned_cols=265 Identities=14% Similarity=0.102 Sum_probs=165.5
Q ss_pred CCeEEEEeCCC----CEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC---------C
Q 001380 612 NNRLFISDSNH----NRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT---------E 677 (1089)
Q Consensus 612 ~g~L~vsd~~~----~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~---------~ 677 (1089)
..++||++.+. ++|.++|.+ ++++.+|..+ ..| ||+++|+|+++||+++ .
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG---------------~~P-gia~SpDgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG---------------FLP-HPVAAEDGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC---------------SSC-EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC---------------CCC-ceEECCCCCEEEEEeccccccccCCC
Confidence 57899999865 899999987 6677777654 268 9999999999999986 3
Q ss_pred CCEEEEEECCCCeEE-EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEE-EEe
Q 001380 678 NHALREIDFVNDTVR-TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTR-AFS 754 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~-~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~-~~~ 754 (1089)
.+.|.+||..++++. ++.-.+... ......|++++++|+|+++||++.. .+.|..+|..++++. .+.
T Consensus 148 ~~~VsviD~~t~~vv~~I~v~g~~r----------~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 148 TDYVEVFDPVTFLPIADIELPDAPR----------FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCC----------CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCccc----------cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 568999999887654 443111100 0012479999999999999999975 789999999987654 332
Q ss_pred CCCcc------------ccCCCCC-------CCC-----ccc---cCCc--eEEEcCCCCEEEEEeCCCCeEEEEEcCCC
Q 001380 755 GDGYE------------RNLNGSS-------SLN-----TSF---AQPS--GISLSPDFMEIYVADSESSSIRALNLKTG 805 (1089)
Q Consensus 755 g~g~~------------~~~~g~~-------~~~-----~~~---~~P~--glav~~~g~~lyvad~~~~~I~~~~~~~~ 805 (1089)
-.+.. ...+|.. ... ..+ ..|. .++++++++.+|+... .++|.+++..++
T Consensus 218 v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~ 296 (426)
T 3c75_H 218 VPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAE 296 (426)
T ss_dssp CCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSS
T ss_pred cCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCC
Confidence 11100 0000000 000 000 1121 2234555555555543 356666665544
Q ss_pred CeEEEecCCCCCCCCccccCCCCCccccccccCceE---EEEccCC-cEEEEeC---------CCCEEEEEeCCCCeEEE
Q 001380 806 GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG---VYCAKNG-QIYVADS---------YNHKIKKLDPASNRVST 872 (1089)
Q Consensus 806 ~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~g---va~~~~G-~lyVaD~---------~n~~I~~~d~~~~~v~t 872 (1089)
.+..+.. +........ ..-..|.| ++++++| ++||++. ..+.|.+||.+++++..
T Consensus 297 ~~~v~~~---------~~~~~~~~i---~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~ 364 (426)
T 3c75_H 297 GATFRAP---------IEALTEAER---ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERIN 364 (426)
T ss_dssp CEEECCC---------EESSCTTTG---GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred ceEEeee---------eeecccccc---ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEE
Confidence 3322110 000000000 00112444 7889886 6999974 23579999998876644
Q ss_pred EeccCCCCCCCCcccccccCCCceEEEccCCc--EEEEECCCCEEEEEeCCCCCceEEEE
Q 001380 873 LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN--LFIADTNNNIIRYLDLNKEEPELQTL 930 (1089)
Q Consensus 873 ~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~--lyVad~~n~~I~~~~~~~~~~~~~~l 930 (1089)
-...+ ..|.+|+++++|+ +|+++..++.|.+||..+. ..+.++
T Consensus 365 ~I~vg--------------~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~-kvv~tI 409 (426)
T 3c75_H 365 KIELG--------------HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG-EELRSV 409 (426)
T ss_dssp EEEEE--------------EEECEEEECCSSSCEEEEEETTTTEEEEEETTTC-CEEEEE
T ss_pred EEECC--------------CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC-CEEEEe
Confidence 32221 2499999999986 8999989999999999987 345565
No 267
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.57 E-value=7.8e-15 Score=146.96 Aligned_cols=123 Identities=14% Similarity=0.147 Sum_probs=107.9
Q ss_pred cCCCCCCCCCCccccCCCCC--ceeecccc-cCCCEEEEEEe-cCCCcchhhhhhhHHHHHHHcCCCCEE-EEEEeCCCC
Q 001380 423 NRKTTPIVPEFPAKLDWLNT--APLQFRRD-LKGKVVVLDFW-TYCCINCMHVLPDLEFLEKKYKDMPFT-VVGVHSAKF 497 (1089)
Q Consensus 423 ~~~~g~~~P~f~~~~~~~~g--~~~~l~~~-~~gk~vll~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~v~-vi~v~~~~~ 497 (1089)
..++|+++|+|++. . +| ++++| ++ ++||++||+|| ..|||.|..|++.+++.+++|++.|+. |++||.
T Consensus 13 ~~~vGd~aPdf~l~-~--~g~~~~v~L-~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~--- 85 (171)
T 2xhf_A 13 PIKVGDIIPDVLVY-E--DVPSKSFPI-HDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAV--- 85 (171)
T ss_dssp CCCTTCBCCCCEEE-C--SSTTCEEET-HHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEES---
T ss_pred cccCcCCCCCeEEe-c--CCCCcEEEh-HHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeC---
Confidence 45799999999976 2 44 79999 77 59999999998 789999999999999999999988995 999986
Q ss_pred CChhcHHHHHHHHHHcCC--ccceeecCChhHHHHhCCC-----------ceeEEEEECCCCcEEEEecCCC
Q 001380 498 DNEKDLEAIRNAVLRYGI--SHPVVNDGDMNLWRELGVN-----------SWPTFAVVGPNGKLLAQLAGEG 556 (1089)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~--~~~v~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~G~~ 556 (1089)
+++...++|.+++++ +|+++.|.+.+++++||+. ....+|||| +|+|++.+....
T Consensus 86 ---D~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v~~~ 153 (171)
T 2xhf_A 86 ---NDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTEPD 153 (171)
T ss_dssp ---SCHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEETTS
T ss_pred ---CCHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEEeCC
Confidence 788888999999999 8999999999999999983 357899998 999999977543
No 268
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.57 E-value=1e-15 Score=154.10 Aligned_cols=117 Identities=14% Similarity=0.129 Sum_probs=95.5
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 001380 166 GFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVI 245 (1089)
Q Consensus 166 ~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~V 245 (1089)
+.|+..++|+.|+++|++++|+||+....++..++++|+. .+|+. .||++++|+.+++++++++++++||
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~v 106 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE-EIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFI 106 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC-EEEEC---------C--CHHHHHHHHHHTTCCGGGEEEE
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH-hhccC---------CCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 3466789999999999999999999999999999999996 65542 7999999999999999999999999
Q ss_pred cCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHH-HHHh
Q 001380 246 EDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLN-DILT 296 (1089)
Q Consensus 246 GD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~-~ll~ 296 (1089)
||+.+|+.+|+++|+.+++. .+ .+.+.. .+++++.++.+-.+. .++.
T Consensus 107 GD~~~Di~~a~~ag~~~~~~-~~--~~~~~~-~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 107 GDDVVDIEVMKKVGFPVAVR-NA--VEEVRK-VAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp ECSGGGHHHHHHSSEEEECT-TS--CHHHHH-HCSEECSSCSSSSHHHHHHH
T ss_pred CCCHHHHHHHHHCCCeEEec-Cc--cHHHHh-hCCEEecCCCCCcHHHHHHH
Confidence 99999999999999986643 32 233333 589999999886543 4443
No 269
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=99.56 E-value=1.5e-15 Score=166.11 Aligned_cols=81 Identities=22% Similarity=0.335 Sum_probs=71.1
Q ss_pred ccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCeEEEEcCCC-CHHHHhhc--CCcEEec
Q 001380 209 FDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDA-LAGVQAAKAAQMRCIAVTTTL-SEERLKEA--SPSLIRK 284 (1089)
Q Consensus 209 fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~-~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~--~~d~vi~ 284 (1089)
|+.+++.+....+||++.+|+.+++++|+++++++||||+ .+|+.+|+++|+++++|.+|. ..+++... .||++++
T Consensus 169 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~ 248 (264)
T 3epr_A 169 LEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLA 248 (264)
T ss_dssp HHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEES
T ss_pred HHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEEC
Confidence 3444556677789999999999999999999999999999 599999999999999999997 55666654 8999999
Q ss_pred CcccC
Q 001380 285 EIGSV 289 (1089)
Q Consensus 285 dl~el 289 (1089)
++.+|
T Consensus 249 ~l~~l 253 (264)
T 3epr_A 249 SLDEW 253 (264)
T ss_dssp CGGGC
T ss_pred CHHHH
Confidence 99998
No 270
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.56 E-value=4.1e-16 Score=170.64 Aligned_cols=210 Identities=18% Similarity=0.181 Sum_probs=123.1
Q ss_pred CCCceEEEEecCCcccCCc-------hHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHH---H
Q 001380 76 WGKVSAVLFDMDGVLCNSE-------EPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSE---A 145 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d~~-------~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 145 (1089)
++++|+|+||+||||++++ .....+ .+.+++.|+.+. ..+...++....+...+.. .++.. ... .
T Consensus 9 m~~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a-~~~l~~~G~~~~--~~t~~~gr~~~~~~~~l~~-~g~~~-~~~~~~~ 83 (271)
T 2x4d_A 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEA-VARLKRSRLKVR--FCTNESAASRAELVGQLQR-LGFDI-SEQEVTA 83 (271)
T ss_dssp TTTCCEEEECCBTTTEECCTTTCEECTTHHHH-HHHHHHSSSEEE--EECCCCSSCHHHHHHHHHH-TTCCC-CGGGEEC
T ss_pred HhcCCEEEEeCCCeEEecCCCCCccCcCHHHH-HHHHHHCCCcEE--EEECCCCCCHHHHHHHHHH-CCCCC-CHHHeec
Confidence 3458999999999999963 222222 455677787643 3344556776666665554 34322 111 0
Q ss_pred HHHHHHHHHHHHhcCCCCCCC-----------------------------CccHHHHHHHHHhC-CCeEEEEcCCChHhH
Q 001380 146 AKKRFFEIYLDKYAKPNSGIG-----------------------------FPGALELINQCKSK-GLKVAVASSADRIKV 195 (1089)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~-----------------------------~pG~~~lL~~Lk~~-Gi~vaIvSn~~~~~~ 195 (1089)
........+...... ..... ++++.++++.|++. |+++ ++++......
T Consensus 84 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~ 161 (271)
T 2x4d_A 84 PAPAACQILKERGLR-PYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVL-ISLGKGRYYA 161 (271)
T ss_dssp HHHHHHHHHHHHTCC-EEEECCGGGGGGGTTSCCSSCSEEEECCCGGGCCHHHHHHHHHHHHHCSSCCE-EEECCCSEEE
T ss_pred HHHHHHHHHHHcCCE-EEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCcCHHHHHHHHHHHHhcCCCeE-EEEcCCcccc
Confidence 011111111111100 00122 33455555555554 5555 4444322111
Q ss_pred HHHHHHCCCCCCCcc---EEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-C
Q 001380 196 DANLAAAGLPVSMFD---AIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-S 270 (1089)
Q Consensus 196 ~~~l~~~gl~~~~fd---~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~ 270 (1089)
...+...++. .+++ .+.+.+....+||++.+|+.+++++|+++++|++|||+. +|+.+|+.+|+.+++|.+|. .
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~ 240 (271)
T 2x4d_A 162 ATSGLMLDVG-PYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFR 240 (271)
T ss_dssp ETTEEEECHH-HHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCC
T ss_pred cCCCcccChh-HHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCC
Confidence 1111111111 1111 122334466789999999999999999999999999999 99999999999999999985 3
Q ss_pred HHHHh--hcCCcEEecCcccCCHHHHH
Q 001380 271 EERLK--EASPSLIRKEIGSVSLNDIL 295 (1089)
Q Consensus 271 ~~~l~--~~~~d~vi~dl~el~i~~ll 295 (1089)
..+.. ...|++++.++.++ .++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~el--~~~l 265 (271)
T 2x4d_A 241 PSDEHHPEVKADGYVDNLAEA--VDLL 265 (271)
T ss_dssp GGGGGCSSCCCSEEESSHHHH--HHHH
T ss_pred chhhcccCCCCCEEeCCHHHH--HHHH
Confidence 33322 35799999999888 4454
No 271
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.55 E-value=3.2e-12 Score=149.63 Aligned_cols=238 Identities=19% Similarity=0.205 Sum_probs=182.6
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
....+++++ ++++|++....++|.+++.+ ++.+..+... -..|.+++++++|+.+|+++..++.
T Consensus 171 ~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (433)
T 3bws_A 171 FVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLT--------------GKWSKILLYDPIRDLVYCSNWISED 235 (433)
T ss_dssp EEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECS--------------SSSEEEEEEETTTTEEEEEETTTTE
T ss_pred ceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCC--------------CCCeeEEEEcCCCCEEEEEecCCCc
Confidence 345678865 88999999999999999986 5666666532 1267999999999999999988999
Q ss_pred EEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC-------CCcEEEEEECCCCeEEEE
Q 001380 681 LREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA-------GQHQIWEHSTVDGVTRAF 753 (1089)
Q Consensus 681 I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~-------~~~~I~~~~~~~g~~~~~ 753 (1089)
|+.+|+.++........+ ..|.+++++|+++.||++.. .++.|+.||..++.....
T Consensus 236 i~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKI-----------------GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp EEEEETTTTEEEEECCCC-----------------SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEEecCC-----------------CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee
Confidence 999999887765443211 24899999999999999886 456899999988866544
Q ss_pred eCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcccc
Q 001380 754 SGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833 (1089)
Q Consensus 754 ~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~ 833 (1089)
... -..|.+++++++++.+|++....++|+.++..++........
T Consensus 299 ~~~---------------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-------------------- 343 (433)
T 3bws_A 299 IGP---------------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-------------------- 343 (433)
T ss_dssp EEE---------------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC--------------------
T ss_pred ccC---------------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC--------------------
Confidence 311 125779999999989999999999999999986654322111
Q ss_pred ccccCceEEEEccCCc-EEEEeCCC--------------CEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEE
Q 001380 834 VLLQHPLGVYCAKNGQ-IYVADSYN--------------HKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGII 898 (1089)
Q Consensus 834 ~~l~~P~gva~~~~G~-lyVaD~~n--------------~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~ 898 (1089)
...|.+++++++|+ +|++...+ +.|+.+|..++.+...... -..|.+++
T Consensus 344 --~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--------------~~~~~~~~ 407 (433)
T 3bws_A 344 --FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--------------GNQPTGLD 407 (433)
T ss_dssp --SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--------------SSSEEEEE
T ss_pred --CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC--------------CCCCceEE
Confidence 13478999999995 88888764 4999999987776554321 13488999
Q ss_pred EccCCc-EEEEECCCCEEEEEeCCC
Q 001380 899 EAQNGN-LFIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 899 vd~~G~-lyVad~~n~~I~~~~~~~ 922 (1089)
++++|+ ||+++..++.|+++++++
T Consensus 408 ~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 408 VSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EcCCCCEEEEEECCCCeEEEEEecC
Confidence 999886 777888899999998764
No 272
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.55 E-value=8.3e-15 Score=140.61 Aligned_cols=113 Identities=13% Similarity=0.220 Sum_probs=91.8
Q ss_pred CCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHH
Q 001380 429 IVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRN 508 (1089)
Q Consensus 429 ~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~ 508 (1089)
.+++++. .+++|..... ...+||++||+||++||++|+.+.|.|.+++++|+ .++.++.|+.+
T Consensus 5 ~~~~l~~--~~~~~~~~~~-~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~------------- 67 (126)
T 2l57_A 5 GIKQINF--QSINVVENLE-EAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE------------- 67 (126)
T ss_dssp CSSCTTT--TCCSEESSTT-TCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT-------------
T ss_pred ccCCCCc--cccchhHHHH-HHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC-------------
Confidence 4555553 3445554434 56689999999999999999999999999999997 46999999631
Q ss_pred HHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 509 AVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 509 ~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
.|.+.++++.|+|.++|+++++|++|+++.++.|..+.+.+.++|+..+.
T Consensus 68 ------------~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 68 ------------EEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGV 117 (126)
T ss_dssp ------------SSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCC
T ss_pred ------------CCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 14456899999999999999999999999999999888888888876654
No 273
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.55 E-value=1.6e-15 Score=168.04 Aligned_cols=199 Identities=20% Similarity=0.199 Sum_probs=135.8
Q ss_pred CCceEEEEecCCcccCCchHHH----------------------------HHHHHHHHHcCCCC-CHHhHhhhcCCCHHH
Q 001380 77 GKVSAVLFDMDGVLCNSEEPSR----------------------------RAAVDVFAEMGVEV-TVEDFLPFMGTGEAN 127 (1089)
Q Consensus 77 ~~~k~ViFD~DGTL~d~~~~~~----------------------------~a~~~~~~~~g~~~-~~~~~~~~~~~~~~~ 127 (1089)
.++++|+||+||||+|+...+. .++.+.++++|+.. +.+++....+.+...
T Consensus 30 ~~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~e~~s~hp~~~a~~~~~~~~g~~~~~~~~~~~~~G~~~~~ 109 (287)
T 3a1c_A 30 EKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVA 109 (287)
T ss_dssp HHCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHTTCCCCCCSCEEEETTTEEEE
T ss_pred hcCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCccccccceeecCCCeEE
Confidence 3479999999999999987664 89999999999873 445555555544322
Q ss_pred --HH---HHHHhhcCCCCCCHHHHHHHHHHHHHHH------------hcC--CCCCCCCccHHHHHHHHHhCCCeEEEEc
Q 001380 128 --FL---GGVASVKGVKGFDSEAAKKRFFEIYLDK------------YAK--PNSGIGFPGALELINQCKSKGLKVAVAS 188 (1089)
Q Consensus 128 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~--~~~~~~~pG~~~lL~~Lk~~Gi~vaIvS 188 (1089)
+. ..+....+... . .....+.+.+.+. +.. .....++||+.++|+.|+++|++++|+|
T Consensus 110 ~~~~~g~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 110 DGILVGNKRLMEDFGVAV-S--NEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp TTEEEECHHHHHHTTCCC-C--HHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCHHHHHhcCCCc-c--HHHHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 00 00001111110 0 1122233333221 100 0123789999999999999999999999
Q ss_pred CCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCC
Q 001380 189 SADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTT 268 (1089)
Q Consensus 189 n~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g 268 (1089)
|.....++..++.+|+. .+|+.++ |. ....++++++.. ++|+||||+.+|+.+|+++|+. +.+..+
T Consensus 187 ~~~~~~~~~~l~~~gl~-~~f~~i~---------~~--~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~~~~~ 252 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLD-LVIAEVL---------PH--QKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSG 252 (287)
T ss_dssp SSCHHHHHHHHHHHTCS-EEECSCC---------TT--CHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EEECCC
T ss_pred CCCHHHHHHHHHHhCCc-eeeeecC---------hH--HHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EEeCCC
Confidence 99999999999999996 7776553 11 226788999999 9999999999999999999997 444332
Q ss_pred CCHHHHhhcCCcEEe--cCcccCCHHHHHhc
Q 001380 269 LSEERLKEASPSLIR--KEIGSVSLNDILTG 297 (1089)
Q Consensus 269 ~~~~~l~~~~~d~vi--~dl~el~i~~ll~~ 297 (1089)
. +.....+++++ .++.++ .+++..
T Consensus 253 --~-~~~~~~ad~v~~~~~~~~l--~~~l~~ 278 (287)
T 3a1c_A 253 --S-DVAVESGDIVLIRDDLRDV--VAAIQL 278 (287)
T ss_dssp --S-CCSSCCSSEEESSSCTHHH--HHHHHT
T ss_pred --C-HHHHhhCCEEEeCCCHHHH--HHHHHH
Confidence 1 12234789999 888877 555543
No 274
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.31 E-value=4.4e-16 Score=169.93 Aligned_cols=202 Identities=16% Similarity=0.237 Sum_probs=133.9
Q ss_pred CCCCceEEEEecCCcccCCchHHHH------------------------HHHHHHHHcCCC-CCHHhHhhhcCCCHHHHH
Q 001380 75 KWGKVSAVLFDMDGVLCNSEEPSRR------------------------AAVDVFAEMGVE-VTVEDFLPFMGTGEANFL 129 (1089)
Q Consensus 75 ~~~~~k~ViFD~DGTL~d~~~~~~~------------------------a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~ 129 (1089)
.+.++++|+||.||||++....+.. ++.+.++++|+. .+.+++....+.+.....
T Consensus 24 ~l~~i~~v~fDktGTLT~g~~~v~~~~~~~~~l~~~~~~e~~s~hp~a~ai~~~~~~~g~~~~~~~~~~~~~G~g~~~~~ 103 (263)
T 2yj3_A 24 KIKEIDTIIFEKTGTLTYGTPIVTQFIGDSLSLAYAASVEALSSHPIAKAIVKYAKEQGVKILEVKDFKEISGIGVRGKI 103 (263)
Confidence 3557899999999999986543322 222333333332 223344444444433333
Q ss_pred HHHHhhcCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCc
Q 001380 130 GGVASVKGVKGFDSEAAKKRFFEIYLDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMF 209 (1089)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~f 209 (1089)
.......+... ........+...|...+... ..++||+.++|+.|+++|++++++||.....++.+++++|+. .+|
T Consensus 104 ~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-~~f 179 (263)
T 2yj3_A 104 SDKIIEVKKAE-NNNDIAVYINGEPIASFNIS--DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-EYY 179 (263)
Confidence 22211112111 00112222233333333222 378999999999999999999999999999999999999996 888
Q ss_pred cEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEe--cCcc
Q 001380 210 DAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIR--KEIG 287 (1089)
Q Consensus 210 d~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi--~dl~ 287 (1089)
+.++ |+.+..++++++..+++|+||||+.+|+.+++++|+. |.+|. ........+|+++ +++.
T Consensus 180 ~~~~-----------p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~---va~g~-~~~~~~~~ad~v~~~~~l~ 244 (263)
T 2yj3_A 180 SNLS-----------PEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVS---VAMGN-GVDISKNVADIILVSNDIG 244 (263)
Confidence 8776 3456789999999999999999999999999999954 44443 2333345789999 8998
Q ss_pred cCCHHHHHhc
Q 001380 288 SVSLNDILTG 297 (1089)
Q Consensus 288 el~i~~ll~~ 297 (1089)
++ .+++..
T Consensus 245 ~l--~~~l~~ 252 (263)
T 2yj3_A 245 TL--LGLIKN 252 (263)
Confidence 87 455544
No 275
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.54 E-value=2.6e-12 Score=144.67 Aligned_cols=246 Identities=13% Similarity=0.166 Sum_probs=170.1
Q ss_pred CCeEEEEeCCCCEEEEEeCC--CCE--EEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECC
Q 001380 612 NNRLFISDSNHNRIVVTDLD--GNF--IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFV 687 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~--g~~--~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~ 687 (1089)
++.+|+++...++|.+++.+ |+. +..+... ..|.+++++|+|+.||+++..++.|+.++.+
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~ 68 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVP---------------GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 68 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECS---------------SCCCCEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecC---------------CCCceEEECCCCCEEEEeecCCCeEEEEEec
Confidence 56799998888999999875 543 2233221 2689999999999999999887899988876
Q ss_pred --CCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCC
Q 001380 688 --NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGS 765 (1089)
Q Consensus 688 --~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~ 765 (1089)
++..+.+..... -..|.+++++|+|+.||++....+.|..|+..++........-
T Consensus 69 ~~~~~~~~~~~~~~---------------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-------- 125 (343)
T 1ri6_A 69 PDDGALTFAAESAL---------------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-------- 125 (343)
T ss_dssp TTTCCEEEEEEEEC---------------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE--------
T ss_pred CCCCceeecccccc---------------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc--------
Confidence 666554432110 0168899999999999999988888988887433221111000
Q ss_pred CCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCC-CCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEE
Q 001380 766 SSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKT-GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYC 844 (1089)
Q Consensus 766 ~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~-~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~ 844 (1089)
.....|.+++++++|+.||+++...++|+.++..+ +........ .... . .-..|.++++
T Consensus 126 ----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~--~-------~~~~~~~~~~ 185 (343)
T 1ri6_A 126 ----EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA-------EVTT--V-------EGAGPRHMVF 185 (343)
T ss_dssp ----CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-------EEEC--S-------TTCCEEEEEE
T ss_pred ----cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccc-------cccc--C-------CCCCcceEEE
Confidence 11235889999999999999998889999999876 444322100 0000 0 0125889999
Q ss_pred ccCCc-EEEEeCCCCEEEEEeCC--CCeEEEEecc--CCCCCCCCcccccccCCCceEEEccCCc-EEEEECCCCEEEEE
Q 001380 845 AKNGQ-IYVADSYNHKIKKLDPA--SNRVSTLAGI--GKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYL 918 (1089)
Q Consensus 845 ~~~G~-lyVaD~~n~~I~~~d~~--~~~v~t~~g~--g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~~~ 918 (1089)
+++|+ +|+++..+++|..++.+ ++.+...... ...+ ......|.+++++++|+ ||+++..++.|.++
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~ 258 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN-------FSDTRWAADIHITPDGRHLYACDRTASLITVF 258 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT-------CCSCCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc-------ccccCCccceEECCCCCEEEEEecCCCEEEEE
Confidence 99996 99999889999999874 3443322111 0100 01234577899999985 88899999999999
Q ss_pred eCCC
Q 001380 919 DLNK 922 (1089)
Q Consensus 919 ~~~~ 922 (1089)
++..
T Consensus 259 d~~~ 262 (343)
T 1ri6_A 259 SVSE 262 (343)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9983
No 276
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.54 E-value=1.3e-12 Score=148.41 Aligned_cols=232 Identities=13% Similarity=0.100 Sum_probs=159.4
Q ss_pred CCCCceEEEeecCCeEEEEeCCCCEEEEEeCC--CCEE--EEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEE
Q 001380 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDLD--GNFI--VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~--g~~~--~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD 675 (1089)
...|..+++++.+..||+++...+.|.+++.+ |... ..+...+. |+........|.+++++|+|+ +|+++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-----~p~~~~~~~~~~~~~~spdg~-l~v~~ 158 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH-----GPRPEQDGSHIHYTDLTPDNR-LAVID 158 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC-----CSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC-----CCCccccCCCceEEEECCCCc-EEEEe
Confidence 46789999999667799999888898888764 4432 23322211 111112345789999999999 99999
Q ss_pred CCCCEEEEEECC-CCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECC--CCeEEE
Q 001380 676 TENHALREIDFV-NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTV--DGVTRA 752 (1089)
Q Consensus 676 ~~n~~I~~~d~~-~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~--~g~~~~ 752 (1089)
..++.|+.++.+ ++.+..+...... .-..|.+++++|+|+.+|+++...+.|..|+.. ++....
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~-------------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTME-------------AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECC-------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcC-------------CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 999999999987 5665544311100 012688999999998999999988887777654 465543
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCC-CeEEEecCCCCCCCCccccCCCCCcc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTG-GSRLLAGGDPIFPDNLFKFGDRDGMG 831 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~-~~~~~~g~~~~~~~~l~~~g~~dg~~ 831 (1089)
........ .+ ......|.+++++|+|+.||+++...++|..++.+.+ ....+..- ..
T Consensus 226 ~~~~~~~~--~~----~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~---------~~------- 283 (347)
T 3hfq_A 226 LGIVKTIP--AD----YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI---------ST------- 283 (347)
T ss_dssp EEEEESSC--TT----CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE---------EC-------
T ss_pred eeeeeecC--CC----CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE---------ec-------
Confidence 32111000 00 1122468899999999899999999999999987632 22222110 00
Q ss_pred ccccccCceEEEEccCCc-EEEEeCCCCEEEEE--eCCCCeEEEEec
Q 001380 832 SEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKL--DPASNRVSTLAG 875 (1089)
Q Consensus 832 ~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~--d~~~~~v~t~~g 875 (1089)
.-..|.+++++++|+ ||+++..++.|..+ |++++.+..+..
T Consensus 284 ---~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 284 ---EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp ---SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred ---CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 013589999999995 99999988888877 888888887753
No 277
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.53 E-value=2.4e-14 Score=145.41 Aligned_cols=123 Identities=15% Similarity=0.283 Sum_probs=104.1
Q ss_pred CCCCCCCCCcccc--C-------CCCC----ceeecccc-cCCCEEEEEEe-cCCCcchh-hhhhhHHHHHHHc-CCCCE
Q 001380 425 KTTPIVPEFPAKL--D-------WLNT----APLQFRRD-LKGKVVVLDFW-TYCCINCM-HVLPDLEFLEKKY-KDMPF 487 (1089)
Q Consensus 425 ~~g~~~P~f~~~~--~-------~~~g----~~~~l~~~-~~gk~vll~Fw-a~wC~~C~-~~~p~l~~l~~~~-~~~~v 487 (1089)
++|+++|+|++.. . ..+| +.+++ ++ ++||++||+|| +.|||.|. .|++.+++.+++| ++.|+
T Consensus 2 ~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l-~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~ 80 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDT-HELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNF 80 (182)
T ss_dssp CTTCBCCCCEEEEEHHHHTC--------CCEEEEEH-HHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCC
T ss_pred CCCCCCCCeEEEcccccccccccccCCCccceeEeH-HHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 5799999999753 1 1156 68999 76 79999999887 78999999 9999999999999 99999
Q ss_pred E-EEEEeCCCCCChhcHHHHHHHHHHcCC-ccceeecCChhHHHHhCCC-----------ceeEEEEECCCCcEEEEecC
Q 001380 488 T-VVGVHSAKFDNEKDLEAIRNAVLRYGI-SHPVVNDGDMNLWRELGVN-----------SWPTFAVVGPNGKLLAQLAG 554 (1089)
Q Consensus 488 ~-vi~v~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~d~~~~l~~~~~v~-----------~~Pt~~lid~~G~i~~~~~G 554 (1089)
. |++||. +++...++|.+++++ +|+++.|.+++++++||+. ..+.+|||| +|+|++.+..
T Consensus 81 ~~V~gvS~------D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~v~ 153 (182)
T 1xiy_A 81 DDIYCITN------NDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMFQE 153 (182)
T ss_dssp SEEEEEES------SCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEEEC
T ss_pred cEEEEEeC------CCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEEEe
Confidence 4 999985 678888999999999 6999999999999999973 367899998 9999998754
Q ss_pred C
Q 001380 555 E 555 (1089)
Q Consensus 555 ~ 555 (1089)
.
T Consensus 154 ~ 154 (182)
T 1xiy_A 154 K 154 (182)
T ss_dssp S
T ss_pred C
Confidence 3
No 278
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.53 E-value=4.7e-15 Score=149.54 Aligned_cols=111 Identities=11% Similarity=0.125 Sum_probs=90.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 173 LINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 173 lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
+|+.|+++|++++|+||.....++..++++|+. .+|+. .||++++|+.+++++|+++++|+||||+.+|+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~-~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 108 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD-YLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDA 108 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS-EEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC-Eeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 789999999999999999999999999999996 55543 39999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCC-HHHHHhc
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVS-LNDILTG 297 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~-i~~ll~~ 297 (1089)
.+|+++|+.++.. ...+.+. ..+++++.+-.... +.++++.
T Consensus 109 ~~~~~ag~~~~~~---~~~~~~~-~~ad~v~~~~~~~g~~~e~~~~ 150 (164)
T 3e8m_A 109 KLLKRVGIAGVPA---SAPFYIR-RLSTIFLEKRGGEGVFREFVEK 150 (164)
T ss_dssp HHHTTSSEEECCT---TSCHHHH-TTCSSCCCCCTTTTHHHHHHHH
T ss_pred HHHHHCCCeEEcC---ChHHHHH-HhCcEEeccCCCCcHHHHHHHH
Confidence 9999999865543 2233333 35888888855443 4444443
No 279
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.53 E-value=1.8e-12 Score=148.59 Aligned_cols=267 Identities=9% Similarity=0.072 Sum_probs=171.0
Q ss_pred CCCCceEEEeecCCeEEEEeCCCCEEEEEeC--CCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCE--EEEEE
Q 001380 600 LKFPGKLAIDILNNRLFISDSNHNRIVVTDL--DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL--LYVAD 675 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~--~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~--lyVaD 675 (1089)
...|..+++++.+..||+++.. .|.+++. +|+........ .. ..|.+++++|+|+. +|+++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~~~~~~~~~-~~------------g~~~~~~~spdg~~l~~~~~~ 103 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTEIVHEASHP-IG------------GHPRANDADTNTRAIFLLAAK 103 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTEEEEEEEEE-CC------------SSGGGGCTTSCCEEEEEEECS
T ss_pred CCCCcEEEECCCCCEEEEEccc--eEEEEEECCCCCEEEeeEee-cC------------CCCccEEECCCCCEEEEEEec
Confidence 3468899999866679999876 7888876 56654332211 00 13778999999984 45554
Q ss_pred -------C-----CCCEEEEEECC-CCeEE-EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEE
Q 001380 676 -------T-----ENHALREIDFV-NDTVR-TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIW 741 (1089)
Q Consensus 676 -------~-----~n~~I~~~d~~-~g~v~-~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~ 741 (1089)
. .++.+..++.+ +|.+. ++..... +....|++++++|+|+.||+++.+.++|+
T Consensus 104 ~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~-------------~~~~~~~~~~~spdG~~l~~~~~~~~~v~ 170 (365)
T 1jof_A 104 QPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY-------------QENTGIHGMVFDPTETYLYSADLTANKLW 170 (365)
T ss_dssp STTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC-------------CTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe-------------CCCCcceEEEECCCCCEEEEEcCCCCEEE
Confidence 1 45677777765 34332 2221100 01237999999999999999999999999
Q ss_pred EEECC-CCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcC--CCCeEE----EecCC
Q 001380 742 EHSTV-DGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK--TGGSRL----LAGGD 814 (1089)
Q Consensus 742 ~~~~~-~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~--~~~~~~----~~g~~ 814 (1089)
.|+.. +|......... . ...-..|.+++++|+|++||+++..+++|..++.+ ++.... +..-
T Consensus 171 ~~~~~~~g~~~~~~~~~------~----~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~- 239 (365)
T 1jof_A 171 THRKLASGEVELVGSVD------A----PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI- 239 (365)
T ss_dssp EEEECTTSCEEEEEEEE------C----SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS-
T ss_pred EEEECCCCCEEEeeeEe------c----CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC-
Confidence 99987 67654332100 0 00023589999999999999999888898887654 344321 1110
Q ss_pred CCCCCCccccCCCCCccccccccCceEEE-EccCCc-EEEEeCCCC-----EEEEEeCC-CCeEEEEeccCCCCCCCCcc
Q 001380 815 PIFPDNLFKFGDRDGMGSEVLLQHPLGVY-CAKNGQ-IYVADSYNH-----KIKKLDPA-SNRVSTLAGIGKAGFKDGAA 886 (1089)
Q Consensus 815 ~~~~~~l~~~g~~dg~~~~~~l~~P~gva-~~~~G~-lyVaD~~n~-----~I~~~d~~-~~~v~t~~g~g~~g~~~g~~ 886 (1089)
+ .. + .|.. +... ....|.+++ +++||+ ||+++...+ +|.+++.+ ++.+..+......
T Consensus 240 ~---~~-~-~g~~-~~~~--~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~------- 304 (365)
T 1jof_A 240 P---PG-I-PDRD-PETG--KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT------- 304 (365)
T ss_dssp C---TT-C-CCBC-TTTS--SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-------
T ss_pred C---CC-c-CCcc-cccc--cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-------
Confidence 0 00 0 0000 0000 112588999 999995 899987655 88888764 5666543210000
Q ss_pred cccccCCCceEEEcc---CC-cEEEEECCCCEEEEEeCCCC
Q 001380 887 LAAQLSEPAGIIEAQ---NG-NLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 887 ~~~~l~~P~gi~vd~---~G-~lyVad~~n~~I~~~~~~~~ 923 (1089)
.-..|.++++++ +| .||+++..+++|.+++.+..
T Consensus 305 ---~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 305 ---PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 113488999998 67 49999988899999998776
No 280
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.52 E-value=1.5e-14 Score=141.71 Aligned_cols=104 Identities=26% Similarity=0.396 Sum_probs=90.8
Q ss_pred cCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCc
Q 001380 437 LDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIS 516 (1089)
Q Consensus 437 ~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1089)
+.+.+|...++ ++++||++||+||++||++|+.+.|.|.+++++|++. +.++.|.+
T Consensus 36 l~~~~~~~~~l-~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~---------------------- 91 (141)
T 3hxs_A 36 IADYENHSKEW-KYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNV---------------------- 91 (141)
T ss_dssp TCCCSSCCCCC-CCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEET----------------------
T ss_pred hhccccchhHH-HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEEC----------------------
Confidence 34557777888 7889999999999999999999999999999999864 88888865
Q ss_pred cceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 517 HPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 517 ~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
|.+.++++.|+|.++|+++++|++|+++ ++.|..+.+.+.++|+.+++
T Consensus 92 -----~~~~~~~~~~~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 92 -----DKEPELARDFGIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp -----TTCHHHHHHTTCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHcCCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHc
Confidence 4566899999999999999999999987 78899899999998887653
No 281
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.52 E-value=4.6e-14 Score=154.51 Aligned_cols=76 Identities=24% Similarity=0.313 Sum_probs=65.2
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC-CHHHHh------hcCCcEEecCcccC
Q 001380 218 FENLKPAPDIFLSASKILNVPTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL-SEERLK------EASPSLIRKEIGSV 289 (1089)
Q Consensus 218 ~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~-~~~~l~------~~~~d~vi~dl~el 289 (1089)
...+||++.+|+.+++++|+++++++||||++ +|+.+|+++|+++++|.+|. ..+.+. ...|+++++++.+|
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 44689999999999999999999999999995 99999999999999999987 444443 23799999999887
Q ss_pred CHHHHH
Q 001380 290 SLNDIL 295 (1089)
Q Consensus 290 ~i~~ll 295 (1089)
.++|
T Consensus 263 --~~~l 266 (268)
T 3qgm_A 263 --VEAL 266 (268)
T ss_dssp --HHTC
T ss_pred --HHHH
Confidence 4443
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.52 E-value=2.6e-12 Score=140.68 Aligned_cols=267 Identities=12% Similarity=0.081 Sum_probs=172.3
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEE---eeCCCEEEE
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY---NAKKNLLYV 673 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~---d~~g~~lyV 673 (1089)
.++-.+|.++++|..++++|+++..+++|.++++++.....+-..+.. .+| .....|.||.+ |++|. |||
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s--~~g----~~~~~~sGl~~~~~D~~gr-L~v 81 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGAS--SNG----DGEQQMSGLSLLTHDNSKR-LFA 81 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTC--CSS----CCSEEEEEEEESSSSSCCE-EEE
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCcc--ccC----CCcceeeEEEEeccCCCCc-EEE
Confidence 355579999999988999999999999999999985433333221111 001 01235789999 78865 776
Q ss_pred -EEC------------CCCEEEEEECC---CCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC
Q 001380 674 -ADT------------ENHALREIDFV---NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ 737 (1089)
Q Consensus 674 -aD~------------~n~~I~~~d~~---~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~ 737 (1089)
+|. +.+.|.++|+. ++.....+........ -..........+.||++|++| +.||++...
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~---~~~~~g~~~~~~nDvavD~~G-naYVt~s~~ 157 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE---FEKKAGKRPFGVVQSAQDRDG-NSYVAFALG 157 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH---HHHHHSSCCEEEEEEEECTTS-CEEEEEEES
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccc---ccccccccccCCceeEECCCC-CEEEeCCCC
Confidence 663 36889999998 5554444321100000 000000123468999999988 999999999
Q ss_pred -cEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCC
Q 001380 738 -HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPI 816 (1089)
Q Consensus 738 -~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~ 816 (1089)
+.|+++++++..+..+.-... .......++||+++|+|+.|+++++ .++|.+|++.. .+..
T Consensus 158 ~~~I~rV~pdG~~~~~~~~~~~---------~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~-pv~~------- 219 (334)
T 2p9w_A 158 MPAIARVSADGKTVSTFAWESG---------NGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK-PYAW------- 219 (334)
T ss_dssp SCEEEEECTTSCCEEEEEECCC---------CSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS-SSCC-------
T ss_pred CCeEEEEeCCCCEEeeeeecCC---------CcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC-Ccce-------
Confidence 999999998876665542110 0122456899999999999999999 99999999872 2110
Q ss_pred CCCCccccCCC-CCccccccccCceEE-EEccCCcE-EEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCC
Q 001380 817 FPDNLFKFGDR-DGMGSEVLLQHPLGV-YCAKNGQI-YVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSE 893 (1089)
Q Consensus 817 ~~~~l~~~g~~-dg~~~~~~l~~P~gv-a~~~~G~l-yVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~ 893 (1089)
.++-. .| ....+..|.+| +...+|++ +|++..++++...+.++=.-..+.+.. ...+.
T Consensus 220 ------~v~~~~~G--~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa~~~g~~----------~~~~~- 280 (334)
T 2p9w_A 220 ------PEPVKING--DFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSANIKKTK----------RSELQ- 280 (334)
T ss_dssp ------CEECEESS--CCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEEEEEEEE----------CGGGG-
T ss_pred ------eecccccC--CcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCcceeEEeeee----------cCccc-
Confidence 00000 01 11246788995 66678876 999988888777776652222222221 12444
Q ss_pred CceEEEc------cCCcEEEEECC
Q 001380 894 PAGIIEA------QNGNLFIADTN 911 (1089)
Q Consensus 894 P~gi~vd------~~G~lyVad~~ 911 (1089)
+.|++++ .+++||+.+..
T Consensus 281 ~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 281 NSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp SSCEEEEEEEEETTEEEEEEEECC
T ss_pred cCceeEEEEeccccCCeEEEEeee
Confidence 7788776 45679999854
No 283
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.52 E-value=7e-13 Score=151.09 Aligned_cols=230 Identities=17% Similarity=0.174 Sum_probs=145.2
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecC---CCEEEE
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI---NEKVYI 732 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~---g~~lyv 732 (1089)
+..|.+|+++++|+ |||++.. ++|++++ ++..+.++..... ...+..|.+|+++|+ ++.|||
T Consensus 30 l~~P~~ia~~pdG~-l~V~e~~-g~I~~i~--~g~~~~~~~~~v~-----------~~g~~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIAERP-GRIRLFR--EGRLSTYAELSVY-----------HRGESGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp CSCEEEEEECTTSC-EEEEETT-TEEEEEE--TTEEEEEEECCCC-----------CSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCceEEEEcCCCe-EEEEeCC-CeEEEEE--CCCccEeecceEe-----------ecCCCCceeEEECCCCCCCCEEEE
Confidence 67899999999998 9999986 8999999 5666666532210 011458999999998 679999
Q ss_pred EECCC-----cEEEEEECCCCeEE---EE-eCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC----------
Q 001380 733 AMAGQ-----HQIWEHSTVDGVTR---AF-SGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE---------- 793 (1089)
Q Consensus 733 ad~~~-----~~I~~~~~~~g~~~---~~-~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~---------- 793 (1089)
++... ++|++++..++.+. .+ .+.. ........|.+|++++|| +|||++..
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p---------~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~ 164 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIP---------ARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDL 164 (352)
T ss_dssp EEEECTTSSEEEEEEEEECSSCEEEEEEEEEEEC---------CCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCT
T ss_pred EEecCCCCCccEEEEEEeCCCCcCceEEEEEeCC---------CCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCC
Confidence 99865 88999998765321 11 1100 001234568999999999 99999742
Q ss_pred ---CCeEEEEEcCCCCeEEEecCCCCCCCCccccCC-CCCccccccccCceEEEEcc-CCcEEEEeCCCCEEEEEeCCCC
Q 001380 794 ---SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGD-RDGMGSEVLLQHPLGVYCAK-NGQIYVADSYNHKIKKLDPASN 868 (1089)
Q Consensus 794 ---~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~-~dg~~~~~~l~~P~gva~~~-~G~lyVaD~~n~~I~~~d~~~~ 868 (1089)
.++|.++++++. +..+ +.|.-+. ........-+.+|.|+++|+ +|+||++|.+++.+.. ....
T Consensus 165 ~~~~g~I~ri~~dG~----~p~~------npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~--~~~d 232 (352)
T 2ism_A 165 ASLGGKILRLTPEGE----PAPG------NPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQG--YGHD 232 (352)
T ss_dssp TCSSSEEEEECTTSS----BCTT------CTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC--------CCC
T ss_pred CCCceEEEEEcCCCC----CCCC------CcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCC--CCCe
Confidence 368999988742 1111 2221000 00000011256799999999 7899999998877322 1112
Q ss_pred eEEEEeccCCCCCC--------CC---c-ccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCC
Q 001380 869 RVSTLAGIGKAGFK--------DG---A-ALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 869 ~v~t~~g~g~~g~~--------~g---~-~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
++..+...+..|+. .+ + ........|.|+++ .+|++||++..+++|.++++++.
T Consensus 233 ei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 233 EVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp EEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEE
T ss_pred EEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCC
Confidence 33333222222211 00 0 01112357899999 57899999999999999998765
No 284
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.51 E-value=5.2e-12 Score=152.63 Aligned_cols=253 Identities=15% Similarity=0.132 Sum_probs=183.5
Q ss_pred EEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEE
Q 001380 607 AIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREID 685 (1089)
Q Consensus 607 avd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d 685 (1089)
++++ ++++||+....+.|.++|.+ |+.+.++..+ ..|++++++|+|++||+++.. +.|+.||
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g---------------~~~~~v~~spdg~~l~v~~~d-~~V~v~D 206 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTG---------------YAVHISRMSASGRYLLVIGRD-ARIDMID 206 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECS---------------TTEEEEEECTTSCEEEEEETT-SEEEEEE
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecC---------------cccceEEECCCCCEEEEECCC-CeEEEEE
Confidence 3676 78999999999999999986 7777777543 137999999999999999976 8999999
Q ss_pred C--CCCeE-EEEecCCCCCCCCCCCCcccccccCCceeEEEec----CCCEEEEEECCCcEEEEEECCCCeEEE-EeCCC
Q 001380 686 F--VNDTV-RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKP----INEKVYIAMAGQHQIWEHSTVDGVTRA-FSGDG 757 (1089)
Q Consensus 686 ~--~~g~v-~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~----~g~~lyvad~~~~~I~~~~~~~g~~~~-~~g~g 757 (1089)
+ .++.+ .++. .| ..|++++++| +|+.+|+++...++|..+|..++++.. +...+
T Consensus 207 ~~~~t~~~~~~i~-~g-----------------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 207 LWAKEPTKVAEIK-IG-----------------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp TTSSSCEEEEEEE-CC-----------------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE
T ss_pred CcCCCCcEEEEEe-cC-----------------CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccC
Confidence 9 66554 3343 22 2699999999 999999999888999999988876543 43222
Q ss_pred ccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE---EEecCCCCCCCCccccCCCCCccccc
Q 001380 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR---LLAGGDPIFPDNLFKFGDRDGMGSEV 834 (1089)
Q Consensus 758 ~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~---~~~g~~~~~~~~l~~~g~~dg~~~~~ 834 (1089)
... ++.. . ..-..+.+|+++++++.+|++..++++|..++..+.... .+..
T Consensus 269 ~~~--~~~~-~-~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~---------------------- 322 (543)
T 1nir_A 269 MTV--DTQT-Y-HPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA---------------------- 322 (543)
T ss_dssp ECS--SSCC-E-ESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC----------------------
T ss_pred ccc--Cccc-c-ccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc----------------------
Confidence 100 0000 0 001246789999998899999999999999998754321 1110
Q ss_pred cccCceEEEEccCCc-EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCC-ceEEE-ccC-CcEEEEEC
Q 001380 835 LLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEP-AGIIE-AQN-GNLFIADT 910 (1089)
Q Consensus 835 ~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P-~gi~v-d~~-G~lyVad~ 910 (1089)
-.+|.+++++++|+ +|++....++|.++|..++.+......+. ..+| .|..+ +++ |.+|++..
T Consensus 323 -~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~------------~ph~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 323 -APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK------------TPHPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp -CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS------------SBCCTTCEEEEETTTEEEEEEEB
T ss_pred -CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC------------CCCCCCCcccCCCCCccEEEecc
Confidence 13588999999996 88999889999999999887765433221 1122 24443 555 67999875
Q ss_pred -CCCEEEEEeCCCC------CceEEEEeec
Q 001380 911 -NNNIIRYLDLNKE------EPELQTLELK 933 (1089)
Q Consensus 911 -~n~~I~~~~~~~~------~~~~~~l~~~ 933 (1089)
+++.|.+++.+.. ...+.++.+.
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcC
Confidence 6799999999862 2356777643
No 285
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.51 E-value=6.7e-12 Score=140.84 Aligned_cols=248 Identities=11% Similarity=0.064 Sum_probs=173.2
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC----
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT---- 676 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~---- 676 (1089)
.|..+++++.++.+|+++...++|.++|.. ++.+..+.... .+ ..-..|.+++++++|+.||+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~ 105 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST-PE--------ERVKSLFGAALSPDGKTLAIYESPVRL 105 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB-TT--------EEEECTTCEEECTTSSEEEEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC-cc--------cccccccceEECCCCCEEEEEeccccc
Confidence 378899998666899999989999999985 67766655431 10 01126899999999998999962
Q ss_pred -------CCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCe
Q 001380 677 -------ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGV 749 (1089)
Q Consensus 677 -------~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~ 749 (1089)
.++.|+.+|..++.+......+ ..|.+++++|+|+.||++ ++.|+.+|..++.
T Consensus 106 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~ 165 (337)
T 1pby_B 106 ELTHFEVQPTRVALYDAETLSRRKAFEAP-----------------RQITMLAWARDGSKLYGL---GRDLHVMDPEAGT 165 (337)
T ss_dssp CSSCEEECCCEEEEEETTTTEEEEEEECC-----------------SSCCCEEECTTSSCEEEE---SSSEEEEETTTTE
T ss_pred ccccccccCceEEEEECCCCcEEEEEeCC-----------------CCcceeEECCCCCEEEEe---CCeEEEEECCCCc
Confidence 3589999999887765443222 257899999999889999 4789999999887
Q ss_pred EEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCC-----------------------eEEEEEcCCCC
Q 001380 750 TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESS-----------------------SIRALNLKTGG 806 (1089)
Q Consensus 750 ~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~-----------------------~I~~~~~~~~~ 806 (1089)
+......+. .+..++++++|+.||++....+ .|..+++.++.
T Consensus 166 ~~~~~~~~~---------------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 166 LVEDKPIQS---------------WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp EEEEECSTT---------------TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred Eeeeeeccc---------------cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 654332110 1122355677766766655444 45777777665
Q ss_pred eEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCc
Q 001380 807 SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGA 885 (1089)
Q Consensus 807 ~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~ 885 (1089)
...+.- +. .-..|.+++++++|+ +|++ ++.|.++|.+++.+......+
T Consensus 231 ~~~~~~------------~~--------~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~-------- 279 (337)
T 1pby_B 231 MAMREV------------RI--------MDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPLP-------- 279 (337)
T ss_dssp EEEEEE------------EE--------CSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEECS--------
T ss_pred ceEeec------------CC--------CCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecCC--------
Confidence 542210 00 013588999999985 8888 489999999887665443221
Q ss_pred ccccccCCCceEEEccCCc-EEEEECCCCEEEEEeCCCCCceEEEEee
Q 001380 886 ALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLEL 932 (1089)
Q Consensus 886 ~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~~~~~~~~~~~~~~l~~ 932 (1089)
..|.+++++++|+ ||++ ..++.|.++++.+. ..+..+..
T Consensus 280 ------~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~-~~~~~~~~ 319 (337)
T 1pby_B 280 ------HSYYSVNVSTDGSTVWLG-GALGDLAAYDAETL-EKKGQVDL 319 (337)
T ss_dssp ------SCCCEEEECTTSCEEEEE-SBSSEEEEEETTTC-CEEEEEEC
T ss_pred ------CceeeEEECCCCCEEEEE-cCCCcEEEEECcCC-cEEEEEEc
Confidence 3489999999986 7776 56899999999876 24555553
No 286
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=5e-12 Score=143.52 Aligned_cols=261 Identities=15% Similarity=0.136 Sum_probs=163.0
Q ss_pred eecCCeEEEEeCC----CCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC-------
Q 001380 609 DILNNRLFISDSN----HNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT------- 676 (1089)
Q Consensus 609 d~~~g~L~vsd~~----~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~------- 676 (1089)
.|..+++||+|.. .++|.++|.+ ++++.+|..+ ..|+ ++++|+|+++||+++
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG---------------~~P~-va~spDG~~lyVan~~~~r~~~ 104 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG---------------FLPN-PVVADDGSFIAHASTVFSRIAR 104 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC---------------SSCE-EEECTTSSCEEEEEEEEEETTE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC---------------CCCc-EEECCCCCEEEEEccccccccc
Confidence 3557899999986 6899999987 6677777654 1575 999999999999985
Q ss_pred --CCCEEEEEECCCCeEEE-Ee-cCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEE
Q 001380 677 --ENHALREIDFVNDTVRT-LA-GNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTR 751 (1089)
Q Consensus 677 --~n~~I~~~d~~~g~v~~-~a-g~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~ 751 (1089)
..+.|.+||..++++.. +. +.|.. .+.-..|++++++|+|+++||++.. .+.|..+|..++++.
T Consensus 105 G~~~~~VsviD~~t~~v~~~I~v~~g~r-----------~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 105 GERTDYVEVFDPVTLLPTADIELPDAPR-----------FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCC-----------CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEECCCccc-----------cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE
Confidence 24679999999876543 42 21111 0112489999999999999999975 789999999988654
Q ss_pred -EEeCCCccccCCCCCCCCccccCCce----EEEcCCCCEEEEEeCC---------------------------------
Q 001380 752 -AFSGDGYERNLNGSSSLNTSFAQPSG----ISLSPDFMEIYVADSE--------------------------------- 793 (1089)
Q Consensus 752 -~~~g~g~~~~~~g~~~~~~~~~~P~g----lav~~~g~~lyvad~~--------------------------------- 793 (1089)
.+.-.|. ....|.| +++.+||+.+||+-..
T Consensus 174 ~tI~v~g~------------~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~ 241 (386)
T 3sjl_D 174 RMLDVPDC------------YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLV 241 (386)
T ss_dssp EEEECCSE------------EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEE
T ss_pred EEEECCCc------------ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEE
Confidence 3321110 0111222 1333333222222211
Q ss_pred ----CCeEEEEEcCCCCeEEEecCCCCCCCCcccc-CCCCCccccccccCceEEEEccCC-cEEEEeC---------CCC
Q 001380 794 ----SSSIRALNLKTGGSRLLAGGDPIFPDNLFKF-GDRDGMGSEVLLQHPLGVYCAKNG-QIYVADS---------YNH 858 (1089)
Q Consensus 794 ----~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~-g~~dg~~~~~~l~~P~gva~~~~G-~lyVaD~---------~n~ 858 (1089)
+++|+.++..++..+.+..- .+|.- +-..| .+-.....+++++++ ++||+.. ..+
T Consensus 242 ~vs~~g~V~v~d~~~~~~~v~~~~------~~~~~~~~~~g----~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 242 WPTYTGKIHQIDLSSGDAKFLPAV------EALTEAERADG----WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp EEBTTSEEEEEECTTSSCEECCCE------ESSCHHHHHTT----EEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred EEeCCCEEEEEECCCCcceeecce------ecccccccccc----ccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 34455555443332211000 00000 00000 000011126667765 7999864 136
Q ss_pred EEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc--EEEEECCCCEEEEEeCCCCCceEEEEeec
Q 001380 859 KIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN--LFIADTNNNIIRYLDLNKEEPELQTLELK 933 (1089)
Q Consensus 859 ~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~--lyVad~~n~~I~~~~~~~~~~~~~~l~~~ 933 (1089)
+|.+||.+++++..-...| ..|.+|+++++|+ ||+++..++.|.++|..+. ..+.++...
T Consensus 312 ~V~viD~~t~kv~~~i~vg--------------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~-k~~~~i~~~ 373 (386)
T 3sjl_D 312 FVVVLDAKTGERLAKFEMG--------------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG-EELRSVNQL 373 (386)
T ss_dssp EEEEEETTTCCEEEEEEEE--------------EEECEEEECSSSSCEEEEEETTTTEEEEEETTTC-CEEEEECCC
T ss_pred EEEEEECCCCeEEEEEECC--------------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC-cEEEEecCC
Confidence 8999999888775543222 2488999999985 8999999999999999887 456677643
No 287
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.50 E-value=8.5e-12 Score=133.65 Aligned_cols=224 Identities=15% Similarity=0.182 Sum_probs=152.9
Q ss_pred CCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 598 SPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 598 ~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
+-...+.|+++++.+++||++...+++|+++|.+|+++.++...| +..+.||+++++|. +||++..
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g-------------~~D~EGIa~~~~g~-~~vs~E~ 89 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDF-------------VKDLETIEYIGDNQ-FVISDER 89 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSS-------------CSSEEEEEECSTTE-EEEEETT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCC-------------CCChHHeEEeCCCE-EEEEECC
Confidence 334679999999988999975555899999999999998885532 34789999997765 8899999
Q ss_pred CCEEEEEECCC-CeEEEE--ecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCc-EEEEEEC--CCCeEE
Q 001380 678 NHALREIDFVN-DTVRTL--AGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH-QIWEHST--VDGVTR 751 (1089)
Q Consensus 678 n~~I~~~d~~~-g~v~~~--ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~-~I~~~~~--~~g~~~ 751 (1089)
+++|..++... +.+..+ ...+..... .=...-|||+++.+++||++..... .|+.++. .+..++
T Consensus 90 ~~~l~~~~v~~~~~i~~~~~~~~~~~~~~----------~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 90 DYAIYVISLTPNSEVKILKKIKIPLQESP----------TNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp TTEEEEEEECTTCCEEEEEEEECCCSSCC----------CSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred CCcEEEEEcCCCCeeeeeeeecccccccc----------ccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 99999887654 322222 111100000 0123589999999999999987655 8888872 111122
Q ss_pred EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcc
Q 001380 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831 (1089)
Q Consensus 752 ~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~ 831 (1089)
.+...- .. ....+..+++|+++|..+++|+...++..|..++.++..+..+.=.. | . .+
T Consensus 160 i~~~~~----~~----~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~----------g-~--~~ 218 (255)
T 3qqz_A 160 ISKDKA----LQ----RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTK----------G-S--RG 218 (255)
T ss_dssp EEECHH----HH----HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECST----------T-G--GG
T ss_pred eecchh----hc----cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCC----------c-c--CC
Confidence 221100 00 01224578999999998899999999999999999865443331100 0 0 01
Q ss_pred ccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCC
Q 001380 832 SEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPAS 867 (1089)
Q Consensus 832 ~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~ 867 (1089)
-...+..|.|||+|++|++||+...| .+++|.+..
T Consensus 219 l~~~~~qpEGia~d~~G~lyIvsE~n-~~y~f~~~~ 253 (255)
T 3qqz_A 219 LSHNIKQAEGVAMDASGNIYIVSEPN-RFYRFTPQS 253 (255)
T ss_dssp CSSCCCSEEEEEECTTCCEEEEETTT-EEEEEEC--
T ss_pred cccccCCCCeeEECCCCCEEEEcCCc-eEEEEEecC
Confidence 12236789999999999999997664 999998753
No 288
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=9.3e-12 Score=136.72 Aligned_cols=224 Identities=12% Similarity=0.095 Sum_probs=164.3
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC-CCEE
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE-NHAL 681 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~-n~~I 681 (1089)
+..+++++ +|++|++ ..++|..+|++|+.+..+..... ....++.+.++|+ ++|++.. +++|
T Consensus 39 ~~~~~~~p-dG~ilvs--~~~~V~~~d~~G~~~W~~~~~~~-------------~~~~~~~~~~dG~-~lv~~~~~~~~v 101 (276)
T 3no2_A 39 CNSVAATK-AGEILFS--YSKGAKMITRDGRELWNIAAPAG-------------CEMQTARILPDGN-ALVAWCGHPSTI 101 (276)
T ss_dssp CCEEEECT-TSCEEEE--CBSEEEEECTTSCEEEEEECCTT-------------CEEEEEEECTTSC-EEEEEESTTEEE
T ss_pred CcCeEECC-CCCEEEe--CCCCEEEECCCCCEEEEEcCCCC-------------ccccccEECCCCC-EEEEecCCCCEE
Confidence 45678887 8889984 46889999999999988775310 1346788889999 7888877 8999
Q ss_pred EEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCcccc
Q 001380 682 REIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERN 761 (1089)
Q Consensus 682 ~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~ 761 (1089)
..++.++..+.++...+.. ......|+++++.++| .+++++..+++|..||+++..+..+...
T Consensus 102 ~~vd~~Gk~l~~~~~~~~~-----------~~~~~~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~G~~~w~~~~~----- 164 (276)
T 3no2_A 102 LEVNMKGEVLSKTEFETGI-----------ERPHAQFRQINKNKKG-NYLVPLFATSEVREIAPNGQLLNSVKLS----- 164 (276)
T ss_dssp EEECTTSCEEEEEEECCSC-----------SSGGGSCSCCEECTTS-CEEEEETTTTEEEEECTTSCEEEEEECS-----
T ss_pred EEEeCCCCEEEEEeccCCC-----------CcccccccCceECCCC-CEEEEecCCCEEEEECCCCCEEEEEECC-----
Confidence 9999988777776432110 1123468889999988 6778899999999999995555566532
Q ss_pred CCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceE
Q 001380 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841 (1089)
Q Consensus 762 ~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~g 841 (1089)
..|.++++.++| .++|++..+++|..+++++|....-.+. .+. ...++..|.+
T Consensus 165 -----------~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG~~~w~~~~-------------~~~--~~~~l~~~~~ 217 (276)
T 3no2_A 165 -----------GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESNRIVRRVNA-------------NDI--EGVQLFFVAQ 217 (276)
T ss_dssp -----------SCCCEEEECTTS-CEEEECBTTSEEEEECTTTCCEEEEEEG-------------GGS--BSCCCSEEEE
T ss_pred -----------CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCCcEEEEecC-------------CCC--CCcccccccc
Confidence 257788998888 8889999999999999996665432211 100 1124778999
Q ss_pred EEEccCCcEEEEeCC----------CCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEE
Q 001380 842 VYCAKNGQIYVADSY----------NHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIE 899 (1089)
Q Consensus 842 va~~~~G~lyVaD~~----------n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~v 899 (1089)
+++.++|++||+++. +.++..+|++++.+-++... ..+..++++|.
T Consensus 218 ~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~------------~~~~~~~~~~~ 273 (276)
T 3no2_A 218 LFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDK------------VKFGMISTICP 273 (276)
T ss_dssp EEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCT------------TTSCCCCEEEE
T ss_pred ceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCc------------ccccceeeeee
Confidence 999999999999963 34699999988777776543 25667777764
No 289
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.50 E-value=1e-14 Score=149.47 Aligned_cols=116 Identities=15% Similarity=0.055 Sum_probs=95.5
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEc
Q 001380 167 FPGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIE 246 (1089)
Q Consensus 167 ~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VG 246 (1089)
.+...++|+.|+++|++++|+||.....++..++++|+. .+|+ ..||++..++++++++|+++++++|||
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~-~~~~---------~~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK-LFFL---------GKLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC-EEEE---------SCSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc-eeec---------CCCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 344568999999999999999999999999999999996 5542 259999999999999999999999999
Q ss_pred CChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHH-HHHh
Q 001380 247 DALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLN-DILT 296 (1089)
Q Consensus 247 D~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~-~ll~ 296 (1089)
|+.+|+.+++.+|+.++.. ...+.+. ..+++++.+..+..+. .+++
T Consensus 107 D~~~Di~~~~~ag~~~~~~---~~~~~~~-~~ad~v~~~~~~~g~~~~~~~ 153 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVA---DAPIYVK-NAVDHVLSTHGGKGAFREMSD 153 (180)
T ss_dssp CSGGGHHHHHHSSEEEECT---TSCHHHH-TTSSEECSSCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeC---CccHHHH-hhCCEEecCCCCCcHHHHHHH
Confidence 9999999999999886643 2233333 4699999998777554 4443
No 290
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.50 E-value=4.9e-14 Score=135.63 Aligned_cols=106 Identities=25% Similarity=0.349 Sum_probs=86.9
Q ss_pred CCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHH
Q 001380 427 TPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAI 506 (1089)
Q Consensus 427 g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~ 506 (1089)
..++|++. ..++..++. ...+||++||+||++||++|+.+.|.|.++++++++ ++.++.|++
T Consensus 21 ~~~~~~~~----~~~~~~~~~-~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~------------ 82 (128)
T 3ul3_B 21 FKKVPRLQ----QNGSNIING-VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDL------------ 82 (128)
T ss_dssp -----CCC----CCCCSSSSB-TTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEG------------
T ss_pred hccCCccc----cCCccHHHH-HHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEEC------------
Confidence 44577776 225556666 677899999999999999999999999999999985 599999964
Q ss_pred HHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 507 RNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 507 ~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
|.+.+++++|+|.++|+++++ ++|+++.++.|..+.+++.++|+
T Consensus 83 ---------------d~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 126 (128)
T 3ul3_B 83 ---------------DKNESLARKFSVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIK 126 (128)
T ss_dssp ---------------GGCHHHHHHTTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHT
T ss_pred ---------------CCCHHHHHHcCCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHH
Confidence 445689999999999999999 89999999999999888887764
No 291
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=99.50 E-value=3.9e-14 Score=164.52 Aligned_cols=96 Identities=21% Similarity=0.307 Sum_probs=88.1
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCC------------hHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHH
Q 001380 166 GFPGALELINQCKSKGLKVAVASSAD------------RIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASK 233 (1089)
Q Consensus 166 ~~pG~~~lL~~Lk~~Gi~vaIvSn~~------------~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~ 233 (1089)
++||+.++|+.|+++|++++|+||.. ...+...++.+|+. |+.+++++++...||+|++|.++++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~---fd~i~~~~~~~~~KP~p~~~~~a~~ 164 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP---FQVLVATHAGLNRKPVSGMWDHLQE 164 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC---CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC---EEEEEECCCCCCCCCCHHHHHHHHH
Confidence 78999999999999999999999965 23378889999995 8999999999999999999999999
Q ss_pred HcC----CCCCcEEEEcCCh-----------------hhHHHHHHcCCeEEE
Q 001380 234 ILN----VPTSECIVIEDAL-----------------AGVQAAKAAQMRCIA 264 (1089)
Q Consensus 234 ~lg----v~p~~~v~VGD~~-----------------~Di~aA~~aG~~~i~ 264 (1089)
++| +++++|+||||+. +|+.+|+++|++++.
T Consensus 165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 998 9999999999997 899999999998654
No 292
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.50 E-value=2.1e-15 Score=153.95 Aligned_cols=100 Identities=8% Similarity=0.125 Sum_probs=83.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 173 LINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 173 lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
+|+.|+++|++++|+||.....++.+++++|+. + +.. .||+++.++.+++++|+++++++||||+.+|+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~----~~~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~ 115 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--V----LHG-----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDL 115 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--E----EES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--e----EeC-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 899999999999999999999999999999984 2 222 39999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcc
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIG 287 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~ 287 (1089)
.+++++|+.++ .+...+.+. ..+++++.+-.
T Consensus 116 ~~~~~ag~~v~---~~~~~~~~~-~~ad~v~~~~~ 146 (176)
T 3mmz_A 116 PCFALVGWPVA---VASAHDVVR-GAARAVTTVPG 146 (176)
T ss_dssp HHHHHSSEEEE---CTTCCHHHH-HHSSEECSSCT
T ss_pred HHHHHCCCeEE---CCChhHHHH-HhCCEEecCCC
Confidence 99999996533 333333333 35799998843
No 293
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.50 E-value=5.5e-12 Score=135.83 Aligned_cols=209 Identities=12% Similarity=0.048 Sum_probs=149.1
Q ss_pred CCCceEEEeecCCeEEEEeC--CCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 601 KFPGKLAIDILNNRLFISDS--NHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~--~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
.||.|+++++ +++||++.. +.++|.++|+. |+++..+..+. ...+.|++++ |+.||+++..
T Consensus 21 ~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-------------~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 21 AFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-------------SYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp CCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-------------TCCEEEEEEE--TTEEEEEETT
T ss_pred CCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-------------CcceEEEEEe--CCEEEEEEec
Confidence 4789999997 589999974 57899999987 88888776431 1244677775 6679999999
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCC
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDG 757 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g 757 (1089)
++.+.++|.++.++..-...| . ..+|+++ ++|+++|+++ ++++|+.+|+++..+..-...+
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g-~---------------~~g~glt--~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQ-M---------------KDGWGLA--TDGKILYGSD-GTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECC-S---------------SSCCEEE--ECSSSEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred CCEEEEEECCCCcEEEEEECC-C---------------CCeEEEE--ECCCEEEEEC-CCCeEEEEECCCCcEEEEEEEC
Confidence 999999999887654433222 1 1346655 4578999999 7899999999987654333222
Q ss_pred ccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCC-CC--ccccc
Q 001380 758 YERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR-DG--MGSEV 834 (1089)
Q Consensus 758 ~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~-dg--~~~~~ 834 (1089)
.. ...+..|+++.+. +| .||++...++.|.++|+.++.+..... ++.. .. .....
T Consensus 146 ~~---------~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~-----------~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 146 YN---------GHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWIL-----------LPNLRKKLIDEGFR 203 (266)
T ss_dssp ET---------TEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEE-----------CHHHHHHHHHTTCT
T ss_pred CC---------CcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEE-----------CCCccccccccccc
Confidence 10 0234568899988 66 999999999999999999887643221 1100 00 00011
Q ss_pred cccCceEEEEccCC-cEEEEeCCCCEEEEEeCC
Q 001380 835 LLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPA 866 (1089)
Q Consensus 835 ~l~~P~gva~~~~G-~lyVaD~~n~~I~~~d~~ 866 (1089)
....|.||+++++| .+||+.-+.+++.+++..
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 23578999999987 699999999999999753
No 294
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.49 E-value=3.6e-15 Score=164.21 Aligned_cols=200 Identities=20% Similarity=0.258 Sum_probs=130.1
Q ss_pred CCCceEEEEecCCcccC----------------------------CchHHHHHHHHHHHHcCCCCC-HHhHhhhcCCCHH
Q 001380 76 WGKVSAVLFDMDGVLCN----------------------------SEEPSRRAAVDVFAEMGVEVT-VEDFLPFMGTGEA 126 (1089)
Q Consensus 76 ~~~~k~ViFD~DGTL~d----------------------------~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~~~~~~ 126 (1089)
++++++|+||+||||++ +.+.+..++.+.++++|+... .+.+....+.+..
T Consensus 10 ~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~ 89 (280)
T 3skx_A 10 AKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVE 89 (280)
T ss_dssp GGGCCEEEEECCCCCEEEEEEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCCCEEEEEETTTEEE
T ss_pred hcCCCEEEEeCCCcCCCCcEEEEEEEecCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCCCCCCccceeecCCCEEE
Confidence 34689999999999999 999999999999999988643 2333333333211
Q ss_pred HHH---------HHHHhhcCCCCCCHHHHHHHHHHHHHHHhc-C-CC--------CCCCCccHHHHHHHHHhCCCeEEEE
Q 001380 127 NFL---------GGVASVKGVKGFDSEAAKKRFFEIYLDKYA-K-PN--------SGIGFPGALELINQCKSKGLKVAVA 187 (1089)
Q Consensus 127 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~--------~~~~~pG~~~lL~~Lk~~Gi~vaIv 187 (1089)
... ..+....+... . .....+.+.....+. . .. ...++||+.++|+.|+++|++++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~ 166 (280)
T 3skx_A 90 GIVNGRRYMVVSPGYIRELGIKT-D--ESVEKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMML 166 (280)
T ss_dssp EEETTEEEEEECHHHHHHTTCCC-C--TTHHHHHTTTCEEEEEEETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEE
T ss_pred EEECCEEEEEecHHHHHHcCCCc-h--HHHHHHHhCCCeEEEEEECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEE
Confidence 110 11111122211 0 111111111000000 0 00 0057899999999999999999999
Q ss_pred cCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcC
Q 001380 188 SSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTT 267 (1089)
Q Consensus 188 Sn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~ 267 (1089)
||.....++..++.+|+. .+|+.+++.+.....||.++ .+ +|+||||+.+|+.+++.+|+ +|.+
T Consensus 167 T~~~~~~~~~~~~~~gl~-~~f~~~~~~~k~~~~k~~~~-------~~-----~~~~vGD~~nDi~~~~~Ag~---~va~ 230 (280)
T 3skx_A 167 TGDNRFVAKWVAEELGLD-DYFAEVLPHEKAEKVKEVQQ-------KY-----VTAMVGDGVNDAPALAQADV---GIAI 230 (280)
T ss_dssp CSSCHHHHHHHHHHHTCS-EEECSCCGGGHHHHHHHHHT-------TS-----CEEEEECTTTTHHHHHHSSE---EEEC
T ss_pred eCCCHHHHHHHHHHcCCh-hHhHhcCHHHHHHHHHHHHh-------cC-----CEEEEeCCchhHHHHHhCCc---eEEe
Confidence 999999999999999996 88888877764444444333 22 78999999999999999994 5656
Q ss_pred CCCHHHHhhcCCcEEe--cCcccCCHHHHHhc
Q 001380 268 TLSEERLKEASPSLIR--KEIGSVSLNDILTG 297 (1089)
Q Consensus 268 g~~~~~l~~~~~d~vi--~dl~el~i~~ll~~ 297 (1089)
+...+... ..+++++ .++.++ .+++..
T Consensus 231 ~~~~~~~~-~~a~~~~~~~~~~~l--~~~l~~ 259 (280)
T 3skx_A 231 GAGTDVAV-ETADIVLVRNDPRDV--AAIVEL 259 (280)
T ss_dssp SCCSSSCC-CSSSEECSSCCTHHH--HHHHHH
T ss_pred cCCcHHHH-hhCCEEEeCCCHHHH--HHHHHH
Confidence 65333322 2467776 777766 566543
No 295
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.49 E-value=4.1e-12 Score=143.35 Aligned_cols=206 Identities=12% Similarity=0.134 Sum_probs=152.1
Q ss_pred CCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC
Q 001380 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG 736 (1089)
Q Consensus 657 ~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~ 736 (1089)
..+.|++++++++.+|++|..++.|++++++++.+..+.. . ..|.+++++++| .+|++.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~-----------------~~v~~i~~~~dg-~l~v~~-- 107 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL-P-----------------FMGSALAKISDS-KQLIAS-- 107 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC-S-----------------SCEEEEEEEETT-EEEEEE--
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC-C-----------------CcceEEEEeCCC-eEEEEE--
Confidence 3578999999877899999999999999999988776642 1 257899999987 788887
Q ss_pred CcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC------CCeEEEEEcCCCCeEEE
Q 001380 737 QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE------SSSIRALNLKTGGSRLL 810 (1089)
Q Consensus 737 ~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~------~~~I~~~~~~~~~~~~~ 810 (1089)
.+.|+.+|+.++.+..+..... ......+++++++++| ++|+++.. .+.|++++ + +....+
T Consensus 108 ~~gl~~~d~~~g~~~~~~~~~~----------~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~-~-g~~~~~ 174 (326)
T 2ghs_A 108 DDGLFLRDTATGVLTLHAELES----------DLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA-K-GKVTKL 174 (326)
T ss_dssp TTEEEEEETTTCCEEEEECSST----------TCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE-T-TEEEEE
T ss_pred CCCEEEEECCCCcEEEEeeCCC----------CCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe-C-CcEEEe
Confidence 3569999999888776653210 0123468899999998 79998763 46888888 4 444433
Q ss_pred ecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCC--CC-eE---EEEeccCCCCCCC
Q 001380 811 AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPA--SN-RV---STLAGIGKAGFKD 883 (1089)
Q Consensus 811 ~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~--~~-~v---~t~~g~g~~g~~~ 883 (1089)
.. .+..|.+++++++|+ +|++++.+++|.++|.+ ++ .+ ..+....
T Consensus 175 ~~----------------------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~------ 226 (326)
T 2ghs_A 175 FA----------------------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST------ 226 (326)
T ss_dssp EE----------------------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT------
T ss_pred eC----------------------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECC------
Confidence 21 134588999999995 99999999999999975 55 32 1221110
Q ss_pred CcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCCCceEEEEe
Q 001380 884 GAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 884 g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
.....|.|+++|++|+|||+...+++|.+++++++ .+..+.
T Consensus 227 -----~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~--~~~~i~ 267 (326)
T 2ghs_A 227 -----GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN--HIARYE 267 (326)
T ss_dssp -----TSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC--EEEEEE
T ss_pred -----CCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC--EEEEEE
Confidence 01235889999999999999988899999999665 445444
No 296
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.49 E-value=1.4e-14 Score=158.51 Aligned_cols=81 Identities=19% Similarity=0.238 Sum_probs=67.6
Q ss_pred ccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCeEEEEcCCC-CHHHHhhc--CCcEEec
Q 001380 209 FDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDA-LAGVQAAKAAQMRCIAVTTTL-SEERLKEA--SPSLIRK 284 (1089)
Q Consensus 209 fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~-~~Di~aA~~aG~~~i~V~~g~-~~~~l~~~--~~d~vi~ 284 (1089)
|+.+++.+....+||++.+|+.+++++|+++++++||||+ .+|+.+|+.+|+.+++|++|. ..+++++. .||++++
T Consensus 170 ~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~ 249 (266)
T 3pdw_A 170 LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID 249 (266)
T ss_dssp HHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES
T ss_pred HHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC
Confidence 4444555667789999999999999999999999999999 699999999999999999998 44555554 7999999
Q ss_pred CcccC
Q 001380 285 EIGSV 289 (1089)
Q Consensus 285 dl~el 289 (1089)
++.+|
T Consensus 250 ~~~el 254 (266)
T 3pdw_A 250 SLTEW 254 (266)
T ss_dssp SGGGG
T ss_pred CHHHH
Confidence 99998
No 297
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.49 E-value=1.2e-14 Score=152.45 Aligned_cols=103 Identities=9% Similarity=0.090 Sum_probs=87.0
Q ss_pred HHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 173 LINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 173 lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
+|+.|+++|++++|+|+.....++..++++|+. .+|+.+ ||++++++.+++++|+++++|+||||+.+|+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~-~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi 153 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT-HLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDW 153 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC-EEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-hhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence 899999999999999999999999999999996 665533 8999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
.+++++|+.++.. . ..+. ....+++++.+..+-
T Consensus 154 ~~~~~ag~~~a~~-~--~~~~-~~~~Ad~v~~~~~~~ 186 (211)
T 3ij5_A 154 PVMAQVGLSVAVA-D--AHPL-LLPKAHYVTRIKGGR 186 (211)
T ss_dssp HHHTTSSEEEECT-T--SCTT-TGGGSSEECSSCTTT
T ss_pred HHHHHCCCEEEeC-C--ccHH-HHhhCCEEEeCCCCC
Confidence 9999999764432 2 2222 234689999887554
No 298
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.49 E-value=3.4e-11 Score=138.17 Aligned_cols=253 Identities=14% Similarity=0.184 Sum_probs=159.0
Q ss_pred ecCCeEEEEeC-CCC---EEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC--------
Q 001380 610 ILNNRLFISDS-NHN---RIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT-------- 676 (1089)
Q Consensus 610 ~~~g~L~vsd~-~~~---~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~-------- 676 (1089)
+...++||+|. +.+ .|.++|.+ ++.+.++..+ ..| +++++|+|+++||++.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g---------------~~p-~i~~spDg~~lyv~n~~~~~~~rg 93 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG---------------FLP-NPVAAHSGSEFALASTSFSRIAKG 93 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC---------------CCC-CeEECCCCCEEEEEeccccccccC
Confidence 34578999997 555 88999986 6666555432 157 9999999999999985
Q ss_pred -CCCEEEEEECCCCeEE-EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEEE
Q 001380 677 -ENHALREIDFVNDTVR-TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRAF 753 (1089)
Q Consensus 677 -~n~~I~~~d~~~g~v~-~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~~ 753 (1089)
..+.|.+||..+.++. ++. .+.... ......|.+++++|+|++||+++.. .++|..+| .++++..-
T Consensus 94 ~~~~~v~viD~~t~~~~~~i~-~~~~~~---------~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 94 KRTDYVEVFDPVTFLPIADIE-LPDAPR---------FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CCCCeEEEEECCCCcEEEEEE-CCCccc---------cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 2567999999765543 332 220000 0011479999999999999999875 68999999 88865433
Q ss_pred -eCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE-EE------ecCCCCCCC------
Q 001380 754 -SGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR-LL------AGGDPIFPD------ 819 (1089)
Q Consensus 754 -~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~-~~------~g~~~~~~~------ 819 (1089)
.. -|.++.+.+++++.|++.+.++++..++. ++... .. .+..+....
T Consensus 163 ~i~------------------~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 163 LLS------------------SPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EcC------------------CCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 21 12234445555566666666666666665 33322 10 111110000
Q ss_pred --C-cc-cc-C-----CC-CCc-c--c---------cccccCceE---EEEccCC-cEEEEeC---------CCCEEEEE
Q 001380 820 --N-LF-KF-G-----DR-DGM-G--S---------EVLLQHPLG---VYCAKNG-QIYVADS---------YNHKIKKL 863 (1089)
Q Consensus 820 --~-l~-~~-g-----~~-dg~-~--~---------~~~l~~P~g---va~~~~G-~lyVaD~---------~n~~I~~~ 863 (1089)
. +| .+ | +. .+. . . ...-..|.| ++++++| ++||+.. ..+.|.+|
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 0 00 00 0 00 000 0 0 000112544 7888886 6999864 34689999
Q ss_pred eCCCCeE-EEEeccCCCCCCCCcccccccCCCceEEEccCCc--EEEEECCCCEEEEEeCCCC
Q 001380 864 DPASNRV-STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN--LFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 864 d~~~~~v-~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~--lyVad~~n~~I~~~~~~~~ 923 (1089)
|.+++++ .++. .+ ..|.+|+++++|+ +|+++..++.|.++|..+.
T Consensus 304 D~~t~~vv~~i~-~g--------------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 304 TGLVGQTSSQIS-LG--------------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred ECCCCEEEEEEE-CC--------------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 9998877 5553 22 2499999999997 7777778899999999887
No 299
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.49 E-value=6.5e-12 Score=141.84 Aligned_cols=265 Identities=16% Similarity=0.166 Sum_probs=174.0
Q ss_pred ceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEE
Q 001380 604 GKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALR 682 (1089)
Q Consensus 604 ~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~ 682 (1089)
.|+++.+ ++++|++....++|.++|.+ |+.+..+.... ...|.+++++++|+.+|+++..++.|+
T Consensus 3 ~g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-------------~~~~~~~~~s~dg~~~~v~~~~~~~i~ 68 (349)
T 1jmx_B 3 TGPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-------------KFGPGTAMMAPDNRTAYVLNNHYGDIY 68 (349)
T ss_dssp -CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSS-------------CCSSCEEEECTTSSEEEEEETTTTEEE
T ss_pred ccccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCC-------------CCCCceeEECCCCCEEEEEeCCCCcEE
Confidence 3566665 88999999999999999986 56666665431 125889999999998999999899999
Q ss_pred EEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-----------CcEEEEEECCCCeEE
Q 001380 683 EIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-----------QHQIWEHSTVDGVTR 751 (1089)
Q Consensus 683 ~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-----------~~~I~~~~~~~g~~~ 751 (1089)
++|+.++.+......+... ...-..|++++++|+|+.||++... .+.|+.+|..++...
T Consensus 69 ~~d~~t~~~~~~~~~~~~~----------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 69 GIDLDTCKNTFHANLSSVP----------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp EEETTTTEEEEEEESCCST----------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred EEeCCCCcEEEEEEccccc----------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc
Confidence 9999888765443222100 0001358999999999999999854 578999987764321
Q ss_pred ----EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEE-EecCCCCCC-----CCc
Q 001380 752 ----AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL-LAGGDPIFP-----DNL 821 (1089)
Q Consensus 752 ----~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~-~~g~~~~~~-----~~l 821 (1089)
.+.. -..+.+++++++|+ +|+++ +.|+.++..++.... +..+....+ +.+
T Consensus 139 ~~~~~~~~----------------~~~~~~~~~s~dg~-l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
T 1jmx_B 139 KPVRTFPM----------------PRQVYLMRAADDGS-LYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVL 198 (349)
T ss_dssp CCSEEEEC----------------CSSCCCEEECTTSC-EEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCC
T ss_pred ceeeeccC----------------CCcccceeECCCCc-EEEcc---CcEEEEeCCCCceeccccccccCCccccCccce
Confidence 1110 11477899999996 98864 349999988776543 222210000 000
Q ss_pred ccc--CCC--------------C---------------------Cccc----cccccCceEEEEcc-CCc-EEEEeCCCC
Q 001380 822 FKF--GDR--------------D---------------------GMGS----EVLLQHPLGVYCAK-NGQ-IYVADSYNH 858 (1089)
Q Consensus 822 ~~~--g~~--------------d---------------------g~~~----~~~l~~P~gva~~~-~G~-lyVaD~~n~ 858 (1089)
..+ +.. | +... ...-..|.++++++ +|+ +|++ .+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~ 275 (349)
T 1jmx_B 199 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LN 275 (349)
T ss_dssp CCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ES
T ss_pred eeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cC
Confidence 000 000 0 0000 00012577888889 884 7777 67
Q ss_pred EEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECCCCEEEEEeCCCCCceEEEEe
Q 001380 859 KIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 859 ~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
+|.++|..++.+......+ ..|.+++++++|+ ||++ ..++.|.++++.+. ..+..+.
T Consensus 276 ~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~-~~~~~~~ 333 (349)
T 1jmx_B 276 RLAKYDLKQRKLIKAANLD--------------HTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTL-EKVKNIK 333 (349)
T ss_dssp EEEEEETTTTEEEEEEECS--------------SCCCEEEECSSSSCEEEE-SBSSEEEEEETTTT-EEEEEEE
T ss_pred eEEEEECccCeEEEEEcCC--------------CCccceEECCCCCEEEEe-cCCCeEEEEecccc-ceeeeee
Confidence 9999999888764433221 2488999999885 7775 55699999999876 2445554
No 300
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.48 E-value=7.8e-14 Score=134.62 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=82.0
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|+|||+|||+||+||+.+.|.|.+++++|+++ +.|+-|.+ |...+++..|
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDV---------------------------De~~e~a~~y 91 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDI---------------------------TEVPDFNTMY 91 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEET---------------------------TTCCTTTTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEEC---------------------------CCCHHHHHHc
Confidence 4689999999999999999999999999999764 78888865 6677899999
Q ss_pred CCCceeEEEEECCCCcEE--E-------EecCCCc-hhhHHHHHHHHHHHhcc
Q 001380 532 GVNSWPTFAVVGPNGKLL--A-------QLAGEGH-RKDLDDLVEAALLFYGK 574 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~--~-------~~~G~~~-~~~l~~~l~~~l~~~~~ 574 (1089)
+|+++||++++ ++|+.+ . +..|... .+++.+.|+..++...+
T Consensus 92 ~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~~ 143 (160)
T 2av4_A 92 ELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGARK 143 (160)
T ss_dssp TCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhhc
Confidence 99999999988 788887 4 7888776 88999999998876654
No 301
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.48 E-value=2.4e-12 Score=146.52 Aligned_cols=227 Identities=13% Similarity=0.180 Sum_probs=145.0
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecC---CCEEEE
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI---NEKVYI 732 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~---g~~lyv 732 (1089)
+..|.+|+++++|+ |||++.. ++|++++. +|. +.+...... ......|.||+++|+ ++.|||
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~-g~I~~~d~-~G~-~~~~~~~v~-----------~~g~~g~~gia~~pdf~~~g~lyv 92 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERP-GRLVLISP-SGK-KLVASFDVA-----------NVGEAGLLGLALHPEFPKKSWVYL 92 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETT-TEEEEECS-SCE-EEEEECCCC-----------CSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCC-CEEEEEeC-CCc-eEeecccee-----------ecCCCceeeEEeCCCCCcCCEEEE
Confidence 67899999999997 9999986 89999985 555 555432210 011347999999998 679999
Q ss_pred EECC---C----cEEEEEECCCC--eE---EE-EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC------
Q 001380 733 AMAG---Q----HQIWEHSTVDG--VT---RA-FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE------ 793 (1089)
Q Consensus 733 ad~~---~----~~I~~~~~~~g--~~---~~-~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~------ 793 (1089)
++.. . ++|++++..++ .+ +. +.+-. ......|++|++++|| +|||++..
T Consensus 93 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~-----------~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~ 160 (354)
T 3a9g_A 93 YASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP-----------GAYIHNGGRIRFGPDG-MLYITTGDAADPRL 160 (354)
T ss_dssp EEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE-----------CCSSCCCCCEEECTTS-CEEEECCCTTCGGG
T ss_pred EEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC-----------CCCCcCCceEEECCCC-cEEEEECCCCCCcc
Confidence 9864 4 78999987765 11 11 11100 1224468999999999 89999632
Q ss_pred -------CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc-CCcEEEEeCCCCE---EEE
Q 001380 794 -------SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK-NGQIYVADSYNHK---IKK 862 (1089)
Q Consensus 794 -------~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~-~G~lyVaD~~n~~---I~~ 862 (1089)
.++|.++++++. +..+.+.....++..| +.+|.|+++|+ +|+||++|...++ |.+
T Consensus 161 ~~d~~~~~G~I~ri~~dG~----~p~~npf~~~~i~a~G----------~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~ 226 (354)
T 3a9g_A 161 AQDLSSLAGKILRVDEEGR----PPADNPFPNSPIWSYG----------HRNPQGIDWHRASGVMVATEHGPVGHDEVNI 226 (354)
T ss_dssp GTCTTCCSSEEEEECTTSC----CCTTSSSTTCCEEEEC----------CSCCCEEEECTTTCCEEEEECCSSSCCEEEE
T ss_pred ccCCCCCCeEEEEEcCCCC----CCCCCCCCCCcEEEEc----------cCCcceEEEeCCCCCEEEEecCCCCCcEEEE
Confidence 368999988742 1111111111223333 56899999999 7999999998764 555
Q ss_pred EeCCCCeEE--EEeccCCCCCCCCcccc-cccCCCceEEE-------ccCCcEEEEECCCCEEEEEeCCCC
Q 001380 863 LDPASNRVS--TLAGIGKAGFKDGAALA-AQLSEPAGIIE-------AQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 863 ~d~~~~~v~--t~~g~g~~g~~~g~~~~-~~l~~P~gi~v-------d~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
+.+.++.-- ........++..-.... ..-..|.|+++ +.+|++||++...++|.++++++.
T Consensus 227 i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 227 ILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp ECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred ecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 543211000 00000000010000000 12346999999 467899999999999999999864
No 302
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.48 E-value=1.2e-14 Score=141.07 Aligned_cols=117 Identities=17% Similarity=0.273 Sum_probs=89.8
Q ss_pred CCCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhH---HHHHHHcCCCCEEEEEEeCCCCCChh
Q 001380 425 KTTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL---EFLEKKYKDMPFTVVGVHSAKFDNEK 501 (1089)
Q Consensus 425 ~~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~v~vi~v~~~~~~~~~ 501 (1089)
..+..+|+|.. +.+.++....+ ++.+||++||+||++||++|+.+.|.+ .+++++++ ++.++.|+++.
T Consensus 5 ~~~~~~~~f~~-~~~~~~~~~~l-~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~----- 75 (134)
T 2fwh_A 5 AQTQTHLNFTQ-IKTVDELNQAL-VEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA----- 75 (134)
T ss_dssp -----CCCCEE-CCSHHHHHHHH-HHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT-----
T ss_pred cccccCCCcEE-ecCHHHHHHHH-HHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC-----
Confidence 45677888873 22334445556 667899999999999999999999999 89999886 48899996521
Q ss_pred cHHHHHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEE--EEecCCCchhhHHHHHHHH
Q 001380 502 DLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLL--AQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 502 ~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~--~~~~G~~~~~~l~~~l~~~ 568 (1089)
. .|...++++.|+|.++|+++++|++|+++ .++.|..+.+++.++|+.+
T Consensus 76 ~------------------~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 76 N------------------DAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp C------------------CHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred C------------------cchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 1 13356789999999999999999999998 7899999988888877654
No 303
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.47 E-value=1.4e-13 Score=126.99 Aligned_cols=87 Identities=29% Similarity=0.478 Sum_probs=74.2
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.++|+|||+|||+||++|+.+.|.+.+++++++ ++.++.|.+ |...++++
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~---------------------------d~~~~l~~ 67 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDV---------------------------DECEDIAQ 67 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEET---------------------------TTCHHHHH
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEec---------------------------ccCHHHHH
Confidence 3467999999999999999999999999999987 477888854 55678999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~ 567 (1089)
.|+|.++||++++ ++|+++.++.|. +.+++.++|++
T Consensus 68 ~~~V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 68 DNQIACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp HTTCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred HcCCCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 9999999998888 899999999995 66666666653
No 304
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.47 E-value=1.1e-11 Score=141.43 Aligned_cols=221 Identities=14% Similarity=0.180 Sum_probs=148.7
Q ss_pred CCcceeEEeeCCCEEEEEECC---CCEEEEE--ECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEE
Q 001380 657 NRPQGLAYNAKKNLLYVADTE---NHALREI--DFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVY 731 (1089)
Q Consensus 657 ~~P~gla~d~~g~~lyVaD~~---n~~I~~~--d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~ly 731 (1089)
..|.+++++|+|+.||+++.. ++.|..+ +.++|.++.+...... -..|..+++ +++.||
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~--------------~~~p~~~~~--dg~~l~ 113 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM--------------GADPCYLTT--NGKNIV 113 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS--------------SSCEEEEEE--CSSEEE
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC--------------CCCcEEEEE--CCCEEE
Confidence 479999999999999999873 4677554 5555776665421110 136888998 677999
Q ss_pred EEECCCcEEEEEECCC-CeEEE----EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCC
Q 001380 732 IAMAGQHQIWEHSTVD-GVTRA----FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG 806 (1089)
Q Consensus 732 vad~~~~~I~~~~~~~-g~~~~----~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~ 806 (1089)
+++...+.|..|+... +.+.. +.-.+ .+..+.......|++++++|+|+.||+++.+.++|+.++.+...
T Consensus 114 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 114 TANYSGGSITVFPIGQDGALLPASDVIEFKG-----SGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp EEETTTTEEEEEEBCTTSCBCSCSEEEECCC-----CCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTC
T ss_pred EEECCCCEEEEEEeCCCCcCcccceeEEccC-----CCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC
Confidence 9999889999888753 32211 11111 01111112234678999999998899999999999988766432
Q ss_pred -------eEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCCCCeEEEEeccCC
Q 001380 807 -------SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGIGK 878 (1089)
Q Consensus 807 -------~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~v~t~~g~g~ 878 (1089)
.... +.. ..... ..-..|.+++++++|+ +|+++..+++|.+++.+++.+..+.....
T Consensus 189 ~~~~~~~l~~~-~~~-----~~~~~---------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~ 253 (361)
T 3scy_A 189 NADNKEKFLTK-GTP-----EAFKV---------APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA 253 (361)
T ss_dssp CTTTCCCCEEE-EEE-----EEEEC---------CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES
T ss_pred Ccccccceeec-ccc-----cceec---------CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec
Confidence 1110 000 00000 0023588999999995 99999889999999987777655432110
Q ss_pred CCCCCCcccccccCCCceEEEccCCc-EEEEECC-CCEEEEEeCC
Q 001380 879 AGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTN-NNIIRYLDLN 921 (1089)
Q Consensus 879 ~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~-n~~I~~~~~~ 921 (1089)
. ......|.+++++++|+ ||+++.. +++|.+++++
T Consensus 254 ~--------~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 254 D--------TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp C--------SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred C--------CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 0 11345688999999996 8999998 8999998886
No 305
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.47 E-value=2.2e-11 Score=147.17 Aligned_cols=256 Identities=12% Similarity=0.108 Sum_probs=181.7
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeC---CCCEEEEEecCCCCCCCCCCCCccccCCcceeEEee----CCCEEEEEE
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDL---DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA----KKNLLYVAD 675 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~---~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~----~g~~lyVaD 675 (1089)
|.++++++.+..||+++.. +.|.++|. .++.+.++..+ ..|.+++++| +|+++|+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~~g---------------~~p~~va~sp~~~~dg~~l~v~~ 244 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIKIG---------------IEARSVESSKFKGYEDRYTIAGA 244 (543)
T ss_dssp EEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEECC---------------SEEEEEEECCSTTCTTTEEEEEE
T ss_pred cceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEecC---------------CCcceEEeCCCcCCCCCEEEEEE
Confidence 7789999988889999987 99999998 36666666532 2689999999 999999999
Q ss_pred CCCCEEEEEECCCCeEE-EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeE---E
Q 001380 676 TENHALREIDFVNDTVR-TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT---R 751 (1089)
Q Consensus 676 ~~n~~I~~~d~~~g~v~-~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~---~ 751 (1089)
...+.|..+|..++++. ++...+..... ....+-..+.+++++++++.+|++....++|+.+|..++.. .
T Consensus 245 ~~~~~v~v~D~~t~~~~~~i~~~g~~~~~------~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~ 318 (543)
T 1nir_A 245 YWPPQFAIMDGETLEPKQIVSTRGMTVDT------QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 318 (543)
T ss_dssp EESSEEEEEETTTCCEEEEEECCEECSSS------CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEE
T ss_pred ccCCeEEEEeccccccceeecccCcccCc------cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeE
Confidence 88899999998876644 44322211000 00011126789999999999999999999999999876432 2
Q ss_pred EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEE-EecCCCCCCCCccccCCCCCc
Q 001380 752 AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL-LAGGDPIFPDNLFKFGDRDGM 830 (1089)
Q Consensus 752 ~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~-~~g~~~~~~~~l~~~g~~dg~ 830 (1089)
.+. . -..|.+++++|+|+++|++...+++|..++..++.... +..+.
T Consensus 319 ~i~-~---------------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~---------------- 366 (543)
T 1nir_A 319 SIG-A---------------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK---------------- 366 (543)
T ss_dssp EEE-C---------------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS----------------
T ss_pred Eec-c---------------CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC----------------
Confidence 222 1 13588999999998899999999999999998876543 22110
Q ss_pred cccccccCc-eEEE-EccC-CcEEEEeC-CCCEEEEEeCCC--------CeEEEEeccCCCCCCCCcccccccCCCceEE
Q 001380 831 GSEVLLQHP-LGVY-CAKN-GQIYVADS-YNHKIKKLDPAS--------NRVSTLAGIGKAGFKDGAALAAQLSEPAGII 898 (1089)
Q Consensus 831 ~~~~~l~~P-~gva-~~~~-G~lyVaD~-~n~~I~~~d~~~--------~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~ 898 (1089)
..|| .++. ++++ |.+|++.. +.+.|.++|.++ ..+.++.+.+ ..+..|+
T Consensus 367 -----~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g--------------~~~~~v~ 427 (543)
T 1nir_A 367 -----TPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG--------------GGSLFIK 427 (543)
T ss_dssp -----SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC--------------SCCCCEE
T ss_pred -----CCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC--------------CCceEEE
Confidence 1133 2333 3566 78999886 678999999865 4556665432 2267799
Q ss_pred EccCCc-EEEEECC------CCEEEEEeCCCCCceEEEEe
Q 001380 899 EAQNGN-LFIADTN------NNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 899 vd~~G~-lyVad~~------n~~I~~~~~~~~~~~~~~l~ 931 (1089)
+.++|+ |||.... ++.|.+|+.++.....+++.
T Consensus 428 ~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~ 467 (543)
T 1nir_A 428 THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP 467 (543)
T ss_dssp CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC
T ss_pred cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEee
Confidence 999986 6665432 45999999987743224443
No 306
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.47 E-value=4.5e-14 Score=145.83 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=85.8
Q ss_pred HHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 173 LINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 173 lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
+|+.|+++|++++|+||.....++..++++|+. .+|+.+ ++|++.++.+++++|+++++|+||||+.+|+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~-~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi 123 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE-HLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL 123 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS-EEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH-HHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence 889999999999999999999999999999996 666543 7778999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCccc
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGS 288 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~e 288 (1089)
.+++++|+.++ .+...+... ..+++++.+..+
T Consensus 124 ~~~~~ag~~~~---~~~~~~~~~-~~ad~v~~~~~~ 155 (189)
T 3mn1_A 124 PVIRRVGLGMA---VANAASFVR-EHAHGITRAQGG 155 (189)
T ss_dssp HHHHHSSEEEE---CTTSCHHHH-HTSSEECSSCTT
T ss_pred HHHHHCCCeEE---eCCccHHHH-HhCCEEecCCCC
Confidence 99999997643 232333333 368999988543
No 307
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=99.46 E-value=2.5e-13 Score=139.11 Aligned_cols=166 Identities=13% Similarity=0.124 Sum_probs=111.7
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHcCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIYLD- 156 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (1089)
+.++|+||+||||+|++..+..++.+ .+|...+.+++. +.+..... +. .. +++.+.+..
T Consensus 3 m~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~~~---g~~~~~~~-------~~---~~----~~~~~~~~~~ 62 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMESLN---GKKLKHMI-------PE---HE----GLVMDILKEP 62 (180)
T ss_dssp CCCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGGCT---TCCC----------------------CHHHHHHHST
T ss_pred cccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHHHc---CccHHHHC-------Cc---hH----HHHHHHHhCc
Confidence 35899999999999999988888776 678776655542 22222111 10 01 122222211
Q ss_pred HhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCC---Ch--HhHHHHHHH-CCCCCCCccEEEEcCCccCCCCCHHHHHH
Q 001380 157 KYAKPNSGIGFPGALELINQCKSKGLKVAVASSA---DR--IKVDANLAA-AGLPVSMFDAIVSADAFENLKPAPDIFLS 230 (1089)
Q Consensus 157 ~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~---~~--~~~~~~l~~-~gl~~~~fd~i~~~~~~~~~KP~~~~~~~ 230 (1089)
.+.. ...++||+.++|+.|+++ ++++|+||. .. ......+++ ++.. .+++.++++++.
T Consensus 63 ~~~~--~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~-~~~~~i~~~~~~------------ 126 (180)
T 3bwv_A 63 GFFR--NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFL-DPQHFVFCGRKN------------ 126 (180)
T ss_dssp TGGG--SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTS-CGGGEEECSCGG------------
T ss_pred chhc--cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCC-CcccEEEeCCcC------------
Confidence 1211 237899999999999995 999999997 32 222444555 6774 778899988762
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHH
Q 001380 231 ASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDIL 295 (1089)
Q Consensus 231 ~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll 295 (1089)
++ ++|+||||+.+|+. .++| ++++|.++.... ..+++++.++.++ ..++
T Consensus 127 ---~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~----~~~~~~i~~~~el--~~~l 175 (180)
T 3bwv_A 127 ---II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY----EHRFERVSGWRDV--KNYF 175 (180)
T ss_dssp ---GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT----CCSSEEECSHHHH--HHHH
T ss_pred ---ee----cccEEecCCcchHH--HhCC-CeEEeCCCcccC----CCCceecCCHHHH--HHHH
Confidence 12 77999999999985 5689 999998764321 4688999999887 4554
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.46 E-value=1.4e-11 Score=138.47 Aligned_cols=208 Identities=18% Similarity=0.203 Sum_probs=141.5
Q ss_pred CCCCceEEEeecCCeEEEEe------------CCCCEEEEEeCCC--CEEEEEecCCCCCCCCCCCCccccCCcceeEEe
Q 001380 600 LKFPGKLAIDILNNRLFISD------------SNHNRIVVTDLDG--NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd------------~~~~~I~~~~~~g--~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d 665 (1089)
...|..|++++ +|.+|++- ...++|+++|++. .....+...+. .+.+.. -+|+||.+.
T Consensus 49 ~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~------~~~~~~-f~PhGi~~~ 120 (355)
T 3sre_A 49 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGN------TLDISS-FNPHGISTF 120 (355)
T ss_dssp CSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECS------SCCGGG-CCEEEEEEE
T ss_pred CCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCC------CCCcCc-eeeeeeEEE
Confidence 35799999997 89999996 2578999999872 12223222110 011222 389999997
Q ss_pred e--CCC-EEEEEECC--CCE--EEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC---
Q 001380 666 A--KKN-LLYVADTE--NHA--LREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA--- 735 (1089)
Q Consensus 666 ~--~g~-~lyVaD~~--n~~--I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~--- 735 (1089)
+ +|. +|||++.. ++. |.+++.+++....+.... ...+++|+|++++++| .+|+++.
T Consensus 121 ~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~-------------g~~~~~pND~~v~~~G-~fyvt~~~~f 186 (355)
T 3sre_A 121 IDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR-------------HKLLPSVNDIVAVGPE-HFYATNDHYF 186 (355)
T ss_dssp ECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC-------------CTTCSSEEEEEEEETT-EEEEEESCSC
T ss_pred ECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc-------------cCCCCCCceEEEeCCC-CEEecCCcEe
Confidence 7 343 69999876 344 556776666554443211 1347899999999988 8999875
Q ss_pred --------------CCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEE
Q 001380 736 --------------GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALN 801 (1089)
Q Consensus 736 --------------~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~ 801 (1089)
..++|+++++. .++.+. ..+..|+||+++||++.|||+|+..++|++++
T Consensus 187 td~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~---------------~~l~~pNGia~spDg~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 187 IDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA---------------EGFDFANGINISPDGKYVYIAELLAHKIHVYE 249 (355)
T ss_dssp SSHHHHHHHHHTTCCCEEEEEECTT--CCEEEE---------------EEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CCcccccchhhccCCccEEEEEECC--eEEEee---------------cCCcccCcceECCCCCEEEEEeCCCCeEEEEE
Confidence 24678888873 444443 44678999999999999999999999999999
Q ss_pred cCCCC-eEEEecCCCCCCCCccccCCCCCccccccccCceEEEEcc-CCcEEEEeC-CCCEEEEEeCC
Q 001380 802 LKTGG-SRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK-NGQIYVADS-YNHKIKKLDPA 866 (1089)
Q Consensus 802 ~~~~~-~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~-~G~lyVaD~-~n~~I~~~d~~ 866 (1089)
.+..+ .... ..|.+ -..|.|+++|+ +|++|||.. ...+|.+++|+
T Consensus 250 ~~~~g~l~~~---------~~~~~-----------~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 250 KHANWTLTPL---------RVLSF-----------DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp ECTTSCEEEE---------EEEEC-----------SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred ECCCCcEecC---------EEEeC-----------CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 86422 2111 01111 13699999999 599999764 54567777765
No 309
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.44 E-value=4.3e-11 Score=139.89 Aligned_cols=243 Identities=17% Similarity=0.215 Sum_probs=181.2
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
.|..+++++ ++++|++....+.|.++|.+ |+.+..+..... ........+++++++|+ +|++...++.
T Consensus 124 ~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~-~~~s~~~d~~ 192 (433)
T 3bws_A 124 QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKY---------KKKLGFVETISIPEHNE-LWVSQMQANA 192 (433)
T ss_dssp CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHH---------HTTCCEEEEEEEGGGTE-EEEEEGGGTE
T ss_pred CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccc---------cccCCceeEEEEcCCCE-EEEEECCCCE
Confidence 466789998 99999999888899999987 666543322100 01123457789988776 8899888899
Q ss_pred EEEEECCCCeE-EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCcc
Q 001380 681 LREIDFVNDTV-RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759 (1089)
Q Consensus 681 I~~~d~~~g~v-~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~ 759 (1089)
|+.+|.+++.. .++...+ ..+.+++++++++.+|++....+.|+.||..++........
T Consensus 193 v~~~d~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--- 252 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTG-----------------KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--- 252 (433)
T ss_dssp EEEEETTTCCEEEEEECSS-----------------SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---
T ss_pred EEEEECCCceEEEEEcCCC-----------------CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---
Confidence 99999987554 4443211 36889999999999999998889999999988766443211
Q ss_pred ccCCCCCCCCccccCCceEEEcCCCCEEEEEeC-------CCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccc
Q 001380 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS-------ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 760 ~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~-------~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
-..|.+++++++|+.||++.. ..+.|+.+++.++........
T Consensus 253 ------------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~------------------- 301 (433)
T 3bws_A 253 ------------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP------------------- 301 (433)
T ss_dssp ------------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-------------------
T ss_pred ------------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-------------------
Confidence 123789999999989999885 456899999886654332210
Q ss_pred cccccCceEEEEccCC-cEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEEC
Q 001380 833 EVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADT 910 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G-~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~ 910 (1089)
-..|.+++++++| .+|++....++|+.+|..++.+...... ...|.+++++++|+ ||++..
T Consensus 302 ---~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--------------~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 302 ---PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV--------------FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp ---EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC--------------SSSEEEEEECTTSSEEEEEEC
T ss_pred ---CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC--------------CCCCCeEEEcCCCCEEEEEec
Confidence 1257889999999 5999999999999999988766544322 23488999999986 888887
Q ss_pred CC--------------CEEEEEeCCCC
Q 001380 911 NN--------------NIIRYLDLNKE 923 (1089)
Q Consensus 911 ~n--------------~~I~~~~~~~~ 923 (1089)
.+ +.|.++++.+.
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred CCCccccccccccccceEEEEEECCCC
Confidence 64 49999999776
No 310
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.44 E-value=5.6e-14 Score=142.81 Aligned_cols=124 Identities=18% Similarity=0.290 Sum_probs=81.7
Q ss_pred eecccccCCCEEEEEEecCCCcchhhhhhhH---HHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcC--Cccce
Q 001380 445 LQFRRDLKGKVVVLDFWTYCCINCMHVLPDL---EFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYG--ISHPV 519 (1089)
Q Consensus 445 ~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~--~~~~v 519 (1089)
+.+ +..+||+|||+|||+||++|+.+.+.+ .++.+.+++ ++.++.|++++.. .......+ ...+ ..+..
T Consensus 40 ~~~-a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~---~~~~~~~~-~~~~~~~~~~~ 113 (172)
T 3f9u_A 40 MEY-ARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKT---PLTEPVKI-MENGTERTLRT 113 (172)
T ss_dssp HHH-HHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCC---EEEEEEEE-EETTEEEEEEE
T ss_pred HHH-HHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCccc---ccchhhhh-hhcchhhhhhh
Confidence 444 556899999999999999999863222 344444432 5899999763211 00000000 0000 00111
Q ss_pred eecCChhH-HHHhCCCceeEEEEECCCCcEEEEecCCCc-hhhHHHHHHHHHHHhcc
Q 001380 520 VNDGDMNL-WRELGVNSWPTFAVVGPNGKLLAQLAGEGH-RKDLDDLVEAALLFYGK 574 (1089)
Q Consensus 520 ~~d~~~~l-~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~-~~~l~~~l~~~l~~~~~ 574 (1089)
+.+....+ ++.|+|.++|++++||++|+++.++.|... .+.+.++|+++++.+++
T Consensus 114 ~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~~~~ 170 (172)
T 3f9u_A 114 VGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENYRK 170 (172)
T ss_dssp HHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHHhhc
Confidence 11222222 688999999999999999999999999988 99999999999988764
No 311
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.43 E-value=4.6e-14 Score=140.58 Aligned_cols=110 Identities=17% Similarity=0.242 Sum_probs=87.5
Q ss_pred CceeecccccCCCEEEEEEe-cCCCcchhhhhhhH---HHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCcc
Q 001380 442 TAPLQFRRDLKGKVVVLDFW-TYCCINCMHVLPDL---EFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISH 517 (1089)
Q Consensus 442 g~~~~l~~~~~gk~vll~Fw-a~wC~~C~~~~p~l---~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (1089)
++.+++ ++.+||++||+|| ++||++|+.++|.| .++.+.+. .++.++.|+.++.. ++++
T Consensus 37 ~~~~~~-a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~---------------~~~~ 99 (154)
T 2ju5_A 37 AEALEH-SKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKN---------------HQPE 99 (154)
T ss_dssp HHHHHH-HHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSC---------------CCCH
T ss_pred HHHHHH-HHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcccc---------------CCCh
Confidence 456666 6778999999999 99999999999999 77766553 35889999763211 2334
Q ss_pred ceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCC--chhhHHHHHHHHHH
Q 001380 518 PVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEG--HRKDLDDLVEAALL 570 (1089)
Q Consensus 518 ~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~--~~~~l~~~l~~~l~ 570 (1089)
++ .|.+.++++.|+|.++|+++++|++|+++.++ |.. +.+.+.+.|+.+++
T Consensus 100 ~~-~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 100 EQ-RQKNQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HH-HHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred hh-HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 32 35667899999999999999999999999999 988 78888888877664
No 312
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.43 E-value=1.7e-13 Score=141.75 Aligned_cols=104 Identities=12% Similarity=0.183 Sum_probs=86.4
Q ss_pred HHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 001380 172 ELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251 (1089)
Q Consensus 172 ~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~D 251 (1089)
..|+.|+++|++++|+||.....++..++++|+. .+|+. .||++..++.+++++|+++++|+||||+.+|
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~-~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nD 128 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGIS-LIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLID 128 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC-EEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGG
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc-EEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHH
Confidence 3588999999999999999999999999999996 55432 3999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 252 VQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 252 i~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
+.+++++|+.++ .+...+.++ ..+++++.+..+-
T Consensus 129 i~~~~~ag~~va---~~na~~~~~-~~ad~v~~~~~~~ 162 (195)
T 3n07_A 129 WPVMEKVALRVC---VADGHPLLA-QRANYVTHIKGGH 162 (195)
T ss_dssp HHHHTTSSEEEE---CTTSCHHHH-HHCSEECSSCTTT
T ss_pred HHHHHHCCCEEE---ECChHHHHH-HhCCEEEcCCCCC
Confidence 999999996543 333333433 3689998876554
No 313
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.43 E-value=6.2e-14 Score=144.97 Aligned_cols=103 Identities=15% Similarity=0.220 Sum_probs=86.5
Q ss_pred HHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 173 LINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 173 lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
.|+.|+++|++++|+||.....++..++.+|+. .+|+.+ ||++++++.+++++|+++++++||||+.+|+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~-~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 123 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT-HYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDL 123 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC-EEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc-cceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 588899999999999999999999999999996 655433 9999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
.+++++|+.++ +.. ..+.+. ..+++++.+..+-
T Consensus 124 ~~~~~ag~~~~-~~~--~~~~~~-~~ad~v~~~~~~~ 156 (191)
T 3n1u_A 124 PLIQQVGLGVA-VSN--AVPQVL-EFADWRTERTGGR 156 (191)
T ss_dssp HHHHHSSEEEE-CTT--CCHHHH-HHSSEECSSCTTT
T ss_pred HHHHHCCCEEE-eCC--ccHHHH-HhCCEEecCCCCC
Confidence 99999998763 322 223333 3689999886544
No 314
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.43 E-value=2.7e-13 Score=127.93 Aligned_cols=88 Identities=24% Similarity=0.397 Sum_probs=78.2
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.++|++||+||++||++|+.+.|.|.+++++|++ +.++.|++ |.+.++++
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~---------------------------d~~~~l~~ 78 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDV---------------------------DDCQDVAS 78 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEET---------------------------TTTHHHHH
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEEC---------------------------CCCHHHHH
Confidence 34789999999999999999999999999999875 88888865 45678999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
.|+|.++|+++++ ++|+++.++.|. +.+.+.++|+++
T Consensus 79 ~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 79 ECEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp HTTCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred HcCCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 9999999999999 899999999998 888888888765
No 315
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.42 E-value=2.9e-13 Score=133.80 Aligned_cols=93 Identities=19% Similarity=0.144 Sum_probs=82.2
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|+|||+|||+||++|+.+.|.|.+++++|+++ +.++.|++ |...++++.|
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~---------------------------d~~~~l~~~~ 73 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDV---------------------------DQTAVYTQYF 73 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEET---------------------------TTCCHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEEC---------------------------CcCHHHHHHc
Confidence 5899999999999999999999999999999765 88898864 5567899999
Q ss_pred CCCceeEEEEECCCCcEE---------EEecC-CCchhhHHHHHHHHHHHhc
Q 001380 532 GVNSWPTFAVVGPNGKLL---------AQLAG-EGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~---------~~~~G-~~~~~~l~~~l~~~l~~~~ 573 (1089)
+|.++|+++ ++++|+++ .++.| ..+.+++.++|+.+++..+
T Consensus 74 ~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~~ 124 (149)
T 3gix_A 74 DISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAM 124 (149)
T ss_dssp TCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHhh
Confidence 999999999 55899999 78888 7888999999999887654
No 316
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.41 E-value=7.2e-13 Score=130.95 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=94.4
Q ss_pred CCCCCCCCccccCCCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHH
Q 001380 426 TTPIVPEFPAKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEA 505 (1089)
Q Consensus 426 ~g~~~P~f~~~~~~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~ 505 (1089)
.+.++++.. ..++++..+.. ...++|++||+||++||++|+.+.|.|++++++++++ +.++.|++
T Consensus 31 ~~~~~~~~~--v~~l~~~~~~~-~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~----------- 95 (148)
T 3p2a_A 31 CGHSLFDGE--VINATAETLDK-LLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNT----------- 95 (148)
T ss_dssp TCCBTTCCC--CEECCTTTHHH-HTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEET-----------
T ss_pred cCCccccCC--ceecCHHHHHH-HHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEEC-----------
Confidence 344555544 44556666654 3457899999999999999999999999999999764 88888865
Q ss_pred HHHHHHHcCCccceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 506 IRNAVLRYGISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 506 ~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
|.+.++++.|+|.++|+++++ ++|+++.++.|..+.+.+.++|+++++.
T Consensus 96 ----------------~~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 96 ----------------EAEPALSTRFRIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp ----------------TTCHHHHHHTTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred ----------------cCCHHHHHHCCCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 456689999999999999999 7999999999999999999999988763
No 317
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.41 E-value=7.9e-12 Score=142.18 Aligned_cols=261 Identities=13% Similarity=0.028 Sum_probs=161.7
Q ss_pred CCeEEEEeCCCC----EEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC---------C
Q 001380 612 NNRLFISDSNHN----RIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT---------E 677 (1089)
Q Consensus 612 ~g~L~vsd~~~~----~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~---------~ 677 (1089)
..++||++.+.+ +|.++|.+ ++++.++..+ ..| |++++|+|+.+||+++ .
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG---------------~~P-~i~~spDg~~lyVan~~~~r~~~G~~ 94 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA---------------FLS-LAVAGHSGSDFALASTSFARSAKGKR 94 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC---------------TTC-EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeCC---------------CCC-ceEECCCCCEEEEEcccccccccCCC
Confidence 478999999888 89999987 6777777655 158 9999999999999984 3
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEE--EECCCCeEEEEe
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWE--HSTVDGVTRAFS 754 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~--~~~~~g~~~~~~ 754 (1089)
.+.|.+||+.++++..-...+..+ ..+....|++++++|+|+++||++.+ .+.|.. +|..+ +..+.
T Consensus 95 ~~~VsviD~~T~~vv~~I~v~~~~---------~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~ 163 (368)
T 1mda_H 95 TDYVEVFDPVTFLPIADIELPDAP---------RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTK 163 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSC---------SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCcc---------ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEE
Confidence 688999999986654332222000 01122479999999999999999976 577888 88765 33332
Q ss_pred CCCc--------c----ccCCCCCC---CCc-----------------cccCCceEEEcCCCCEEEEEeCCCCeEEEEEc
Q 001380 755 GDGY--------E----RNLNGSSS---LNT-----------------SFAQPSGISLSPDFMEIYVADSESSSIRALNL 802 (1089)
Q Consensus 755 g~g~--------~----~~~~g~~~---~~~-----------------~~~~P~glav~~~g~~lyvad~~~~~I~~~~~ 802 (1089)
-.+. . ...+|... ... --..|. + .++++.+|++.. +.|..++.
T Consensus 164 v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~ 238 (368)
T 1mda_H 164 SASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDI 238 (368)
T ss_dssp CSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEEC
T ss_pred CCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEEC
Confidence 1100 0 00000000 000 001233 2 344445555554 66777776
Q ss_pred CCCCeEEEecCCCCCCCCccccCCCCCccccccccCceE---EEEccCC-cEEEEeC-C-------CCEEEEEeCCCCeE
Q 001380 803 KTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG---VYCAKNG-QIYVADS-Y-------NHKIKKLDPASNRV 870 (1089)
Q Consensus 803 ~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~g---va~~~~G-~lyVaD~-~-------n~~I~~~d~~~~~v 870 (1089)
.++..+.+.. +.++.. .....-..|.| ++++++| ++||+.. . .+.+.+||.+++++
T Consensus 239 ~~~~~~v~~~---------~~~~~~---~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v 306 (368)
T 1mda_H 239 PAAGATMKAA---------IDGNES---GRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT 306 (368)
T ss_dssp CSSCCEEECC---------CCSSCT---HHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE
T ss_pred CCCcceEEEE---------EEeccc---cccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE
Confidence 5433222210 001000 00001123555 7899887 6999865 3 24567999988765
Q ss_pred EEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEEC-CCCEEEEEeCCCCCceEEEEe
Q 001380 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADT-NNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 871 ~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~-~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
..-...| ..|.||+++++|+ +|++.. .++.|.++|+.+. ..+.++.
T Consensus 307 v~~i~vg--------------~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~-kvv~~I~ 354 (368)
T 1mda_H 307 SGPISNG--------------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD-QDQSSVE 354 (368)
T ss_dssp EECCEEE--------------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC-EEEEECC
T ss_pred EEEEECC--------------CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC-cEEEEEE
Confidence 4322121 1499999999996 999998 6999999999987 2445554
No 318
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.41 E-value=4.2e-13 Score=138.42 Aligned_cols=110 Identities=11% Similarity=0.144 Sum_probs=90.6
Q ss_pred HHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 173 LINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 173 lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
+|+.|+++|++++|+||.....++..++++|+. .+|+ ..||++++|+++++++|+++++++||||+.+|+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~-~~~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGIT-HLYQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC-EEEC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc-eeec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 788999999999999999999999999999996 5543 369999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHH-HHHh
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLN-DILT 296 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~-~ll~ 296 (1089)
.+|+++|+.+++. .+ .+.+.. .+++++.+..+..+. ++++
T Consensus 131 ~~a~~ag~~~~~~-~~--~~~~~~-~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 131 PVMEKVGLSVAVA-DA--HPLLIP-RADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTTSSEEEECT-TS--CTTTGG-GSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHCCCEEEec-Cc--CHHHHh-cCCEEEeCCCCCcHHHHHHH
Confidence 9999999887543 22 223333 589999998666444 4443
No 319
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.40 E-value=7.4e-13 Score=128.80 Aligned_cols=91 Identities=23% Similarity=0.392 Sum_probs=80.4
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|.++++++++. +.++.|++ |.+.++++.|
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~---------------------------~~~~~l~~~~ 88 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDT---------------------------EKEQELAGAF 88 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeC---------------------------CCCHHHHHHc
Confidence 4689999999999999999999999999999864 88898865 4456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+|.++|+++++|++|+++ .+.|..+.+.+.++|++.+..
T Consensus 89 ~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 89 GIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp TCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred CCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 999999999999999998 778888999999998877754
No 320
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.40 E-value=8.7e-13 Score=125.60 Aligned_cols=89 Identities=21% Similarity=0.208 Sum_probs=81.2
Q ss_pred CEEEEEEecCCC--cchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 454 KVVVLDFWTYCC--INCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 454 k~vll~Fwa~wC--~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|||+|||+|| ++|+.+.|.|.++.++|.++ +.++-|.+ |.+.+++.+|
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdv---------------------------De~~~la~~y 85 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAA---------------------------EAERGLMARF 85 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECG---------------------------GGHHHHHHHH
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEEC---------------------------CCCHHHHHHc
Confidence 499999999999 99999999999999999864 88888854 6778999999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+|+++||++++ ++|+++.+..|....+++.++|+.++..
T Consensus 86 gV~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l~~ 124 (137)
T 2qsi_A 86 GVAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp TCCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred CCccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999999999 9999999999999999999999887743
No 321
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.40 E-value=6.4e-13 Score=124.50 Aligned_cols=88 Identities=27% Similarity=0.453 Sum_probs=78.6
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.++++++++ ++.++.|++ |.+.++++.|
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~---------------------------~~~~~l~~~~ 67 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDV---------------------------DENQETAGKY 67 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEET---------------------------TTCCSHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEEC---------------------------CCCHHHHHHc
Confidence 789999999999999999999999999999986 489999965 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++++..
T Consensus 68 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 68 GVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 99999999999 9999999999999888888777643
No 322
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.39 E-value=1.3e-12 Score=125.79 Aligned_cols=94 Identities=21% Similarity=0.341 Sum_probs=82.7
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|.++++++++. +.++.|++ |.+.++++.|
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~---------------------------~~~~~l~~~~ 85 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNA---------------------------DKHQSLGGQY 85 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEET---------------------------TTCHHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeC---------------------------CCCHHHHHHc
Confidence 5789999999999999999999999999999864 88888854 4567899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
+|.++|++++++++|+++.++.|..+.+.+.++|.+.+....
T Consensus 86 ~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 86 GVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp TCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred CCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHhcCC
Confidence 999999999999999877888999899999999988887644
No 323
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.39 E-value=1.8e-10 Score=123.33 Aligned_cols=222 Identities=13% Similarity=0.158 Sum_probs=148.4
Q ss_pred CCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC
Q 001380 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG 736 (1089)
Q Consensus 657 ~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~ 736 (1089)
..+.||+++++++.||++...+.+|.++|+++..++++.-.| ...+.||++.+++ .+||++.+
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g----------------~~D~EGIa~~~~g-~~~vs~E~ 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDF----------------VKDLETIEYIGDN-QFVISDER 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSS----------------CSSEEEEEECSTT-EEEEEETT
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCC----------------CCChHHeEEeCCC-EEEEEECC
Confidence 468999999998889987667899999999966666664222 2478999999766 89999999
Q ss_pred CcEEEEEECCCC-eEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCC-eEEEEEc--CCCCeEEEec
Q 001380 737 QHQIWEHSTVDG-VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESS-SIRALNL--KTGGSRLLAG 812 (1089)
Q Consensus 737 ~~~I~~~~~~~g-~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~-~I~~~~~--~~~~~~~~~g 812 (1089)
+++++.++.... .+........ . .+..+.+. ...|||+++++++||++..... .|+.++- .+...+.+..
T Consensus 90 ~~~l~~~~v~~~~~i~~~~~~~~-~--~~~~~~N~---g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~ 163 (255)
T 3qqz_A 90 DYAIYVISLTPNSEVKILKKIKI-P--LQESPTNC---GFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKD 163 (255)
T ss_dssp TTEEEEEEECTTCCEEEEEEEEC-C--CSSCCCSS---CCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEEC
T ss_pred CCcEEEEEcCCCCeeeeeeeecc-c--cccccccC---CcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecc
Confidence 999998875432 2222111100 0 00001111 2479999999999999876554 7777761 1111111100
Q ss_pred CCCCCCCCccccCCCCCccccccccCceEEEEcc-CCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCccccccc
Q 001380 813 GDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK-NGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQL 891 (1089)
Q Consensus 813 ~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~-~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l 891 (1089)
+ .+ .....+..+.++++|+ .|++||....+++|..+|.++..+..+.-.... ......+
T Consensus 164 --~-------~~------~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~-----~~l~~~~ 223 (255)
T 3qqz_A 164 --K-------AL------QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGS-----RGLSHNI 223 (255)
T ss_dssp --H-------HH------HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTG-----GGCSSCC
T ss_pred --h-------hh------ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCcc-----CCccccc
Confidence 0 00 0011234689999997 578999999999999999998877766533110 0122357
Q ss_pred CCCceEEEccCCcEEEEECCCCEEEEEeCCC
Q 001380 892 SEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 892 ~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~ 922 (1089)
..|.||++|++|+|||+.-. |.+.+|+...
T Consensus 224 ~qpEGia~d~~G~lyIvsE~-n~~y~f~~~~ 253 (255)
T 3qqz_A 224 KQAEGVAMDASGNIYIVSEP-NRFYRFTPQS 253 (255)
T ss_dssp CSEEEEEECTTCCEEEEETT-TEEEEEEC--
T ss_pred CCCCeeEECCCCCEEEEcCC-ceEEEEEecC
Confidence 78999999999999999765 5999997654
No 324
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.39 E-value=7.2e-13 Score=123.50 Aligned_cols=86 Identities=23% Similarity=0.418 Sum_probs=75.2
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.++++++++ +.++.|.+ |.+.++++.|
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~---------------------------~~~~~l~~~~ 73 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDV---------------------------DELGDVAQKN 73 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEET---------------------------TTCHHHHHHT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEEC---------------------------CCCHHHHHHc
Confidence 589999999999999999999999999999974 77777754 4567899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+|.++|++++++ +|+++.++.|. ..+.+.++|+++
T Consensus 74 ~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 74 EVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred CCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhh
Confidence 999999999996 99999999998 567888777654
No 325
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.39 E-value=5.2e-13 Score=132.97 Aligned_cols=90 Identities=18% Similarity=0.357 Sum_probs=81.3
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.++++||+||++||++|+.+.|.|++++++|+++ +.++.|++ |.+.++++.|
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~---------------------------~~~~~l~~~~ 114 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDT---------------------------QAHPAVAGRH 114 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEET---------------------------TTSTHHHHHT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeC---------------------------CccHHHHHHc
Confidence 6899999999999999999999999999999864 89999965 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++.
T Consensus 115 ~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 115 RIQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 99999999999 899999999999999999999988764
No 326
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.39 E-value=1.3e-12 Score=121.27 Aligned_cols=89 Identities=24% Similarity=0.485 Sum_probs=79.7
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|+++++++++. +.++.|++ |.+.++++.|
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~---------------------------~~~~~~~~~~ 70 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNI---------------------------DQNPGTAPKY 70 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEET---------------------------TTCTTHHHHT
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEEC---------------------------CCCHHHHHHc
Confidence 5799999999999999999999999999999864 99999865 3455789999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++
T Consensus 71 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 71 GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 99999999999 89999999999999999999888765
No 327
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.39 E-value=1.1e-11 Score=146.01 Aligned_cols=259 Identities=13% Similarity=0.120 Sum_probs=172.4
Q ss_pred cCCeEEEEeCCCCEEEEEeCCC-CEEEEEecCCCCCCCCCCCCccccCCcceeEE-e-eCCCEEEEEE------------
Q 001380 611 LNNRLFISDSNHNRIVVTDLDG-NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAY-N-AKKNLLYVAD------------ 675 (1089)
Q Consensus 611 ~~g~L~vsd~~~~~I~~~~~~g-~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~-d-~~g~~lyVaD------------ 675 (1089)
++.+|||+|..++||.++|.+. +....+.-+ .. ..|+|+++ . |+++++|++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip-~g------------~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~ 166 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NA------------KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTN 166 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SC------------CSEEEEEECCSSBCSEEEEEECSCEESSCSSSS
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC-CC------------CCCcceeeeecCCCcEEEEecccccccCCCCcc
Confidence 4678999999999999999985 444444322 11 26899998 4 8999999995
Q ss_pred -----CCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC-------------
Q 001380 676 -----TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ------------- 737 (1089)
Q Consensus 676 -----~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~------------- 737 (1089)
...+.+..||.++..+..-...| .+|.+++++++|+++|++...+
T Consensus 167 l~~~~~~~~~vtvID~~t~~v~~qI~Vg-----------------g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~ 229 (595)
T 1fwx_A 167 MEDVANYVNVFTAVDADKWEVAWQVLVS-----------------GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAE 229 (595)
T ss_dssp TTCGGGEEEEEEEEETTTTEEEEEEEES-----------------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCS
T ss_pred cccccccCceEEEEECCCCeEEEEEEeC-----------------CCccceEECCCCCEEEEEecCcccCcchhhccccc
Confidence 33458889999887655544322 1689999999999999999776
Q ss_pred -cEEEEEECCC-------------CeEEEEeCCCccccCCCCC-C-CCccccCCceEEEcCCCCEEEEEeCCCCeEEEEE
Q 001380 738 -HQIWEHSTVD-------------GVTRAFSGDGYERNLNGSS-S-LNTSFAQPSGISLSPDFMEIYVADSESSSIRALN 801 (1089)
Q Consensus 738 -~~I~~~~~~~-------------g~~~~~~g~g~~~~~~g~~-~-~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~ 801 (1089)
..|..+|... +.+..+.+.... +.. . .-.--.+|+|+.++|||+++||++..+++|.+++
T Consensus 230 ~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~----~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid 305 (595)
T 1fwx_A 230 MDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEA----SSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLD 305 (595)
T ss_dssp EEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGG----CCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEE
T ss_pred cceEEEeeccceeEeccCCCeeEECcEEEEeCcccC----CceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEE
Confidence 3355554221 123334332200 000 0 0011147999999999999999999999999999
Q ss_pred cCCCCeEEEecCCCCCCCCccccCCCCCc-cccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCC-----------Ce
Q 001380 802 LKTGGSRLLAGGDPIFPDNLFKFGDRDGM-GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPAS-----------NR 869 (1089)
Q Consensus 802 ~~~~~~~~~~g~~~~~~~~l~~~g~~dg~-~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~-----------~~ 869 (1089)
.++.... ..+. .... +-. +.-..-..|++++++++|++|++..-.+.|.++|.++ ..
T Consensus 306 ~~~~~~~-~~~~--------l~~~--~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~v 374 (595)
T 1fwx_A 306 VTRFDAV-FYEN--------ADPR--SAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPI 374 (595)
T ss_dssp GGGHHHH-HHSC--------CCGG--GGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCE
T ss_pred Ccccccc-cccc--------cCcc--cceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhccccccee
Confidence 8743100 0000 0000 000 0000113699999999999999999999999998754 23
Q ss_pred EEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECCC-CEE-----------EEEeCCCC
Q 001380 870 VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNN-NII-----------RYLDLNKE 923 (1089)
Q Consensus 870 v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n-~~I-----------~~~~~~~~ 923 (1089)
+.++.- +|..| ......|+++.+||+ ||+++... +|+ +.|+..+.
T Consensus 375 i~kidV----~yqpG-----h~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 375 KDKLDV----HYQPG-----HLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp EEEEEC----SSCEE-----EEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred EEEeec----ccccc-----cceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 444432 12211 345567888889996 99999887 777 88888765
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.38 E-value=1.7e-11 Score=144.01 Aligned_cols=175 Identities=14% Similarity=0.231 Sum_probs=109.3
Q ss_pred CCCCCCCCCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeC---CCE
Q 001380 595 LFTSPLKFPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK---KNL 670 (1089)
Q Consensus 595 ~~~~~l~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~---g~~ 670 (1089)
.+++.|..|++|++++ +|+|||++...++|++++.+ |+........ . .+. .......+.||+++|+ ++.
T Consensus 21 ~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~-~-~~~----~~~g~~Gllgia~~Pdf~~~g~ 93 (454)
T 1cru_A 21 VILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVP-E-IVN----DADGQNGLLGFAFHPDFKNNPY 93 (454)
T ss_dssp EEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECT-T-CCC----CTTSSCSEEEEEECTTTTTSCE
T ss_pred EEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCC-c-ccc----ccCCCCceeEEEECCCcCcCCE
Confidence 4567899999999998 89999999987899999874 6543322211 1 000 0001235679999996 667
Q ss_pred EEEEECC------------CCEEEEEECCCC--e---EEEEec-CCCCCCCCCCCCcccccccCCceeEEEecCCCEEEE
Q 001380 671 LYVADTE------------NHALREIDFVND--T---VRTLAG-NGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYI 732 (1089)
Q Consensus 671 lyVaD~~------------n~~I~~~d~~~g--~---v~~~ag-~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyv 732 (1089)
|||+++. .++|.+++.+.+ . .+++.. ... .....+.+|+++++| .|||
T Consensus 94 lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-------------~~~H~~~~l~f~pDG-~Lyv 159 (454)
T 1cru_A 94 IYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-------------SKDHQSGRLVIGPDQ-KIYY 159 (454)
T ss_dssp EEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-------------CSSCCEEEEEECTTS-CEEE
T ss_pred EEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-------------CCCCCCCeEeECCCC-eEEE
Confidence 9999864 468988886532 2 223321 110 013478999999988 8999
Q ss_pred EECC--------------------------------CcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEE
Q 001380 733 AMAG--------------------------------QHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL 780 (1089)
Q Consensus 733 ad~~--------------------------------~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav 780 (1089)
+... .++|+++++++..- .++..... ....-...++.+|.||++
T Consensus 160 ~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip---~~Npf~~~-~~~ei~a~G~RNp~gla~ 235 (454)
T 1cru_A 160 TIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP---KDNPSFNG-VVSHIYTLGHRNPQGLAF 235 (454)
T ss_dssp EECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC---TTCCEETT-EECSEEEBCCSEEEEEEE
T ss_pred EECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC---CCCCCCCC-CcceEEEECCCCcceEEE
Confidence 8542 24677776654200 00000000 000012256789999999
Q ss_pred cCCCCEEEEEeCCCC
Q 001380 781 SPDFMEIYVADSESS 795 (1089)
Q Consensus 781 ~~~g~~lyvad~~~~ 795 (1089)
+++| .||++|.+..
T Consensus 236 dp~G-~L~~~d~g~~ 249 (454)
T 1cru_A 236 TPNG-KLLQSEQGPN 249 (454)
T ss_dssp CTTS-CEEEEEECSS
T ss_pred CCCC-CEEEEecCCC
Confidence 9976 9999997654
No 329
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.38 E-value=4.7e-11 Score=126.74 Aligned_cols=205 Identities=13% Similarity=0.094 Sum_probs=139.8
Q ss_pred cceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCc
Q 001380 659 PQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH 738 (1089)
Q Consensus 659 P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~ 738 (1089)
-+||.++ ++.||++...+++|+++|++++++..-. .+.. ...-|+++ .++.||++.+.++
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~---------------~FgeGit~--~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN---------------IFAEGLAS--DGERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT---------------CCEEEEEE--CSSCEEEEESSSC
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC---------------cceeEEEE--eCCEEEEEEccCC
Confidence 3899997 4679999999999999999987754433 2210 12244555 4679999999999
Q ss_pred EEEEEECCCCeEE-EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCC
Q 001380 739 QIWEHSTVDGVTR-AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIF 817 (1089)
Q Consensus 739 ~I~~~~~~~g~~~-~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~ 817 (1089)
.+++||+.+..+. .+.-. ..+.||+. +|++||++| ++++|+.+|+.+..+..-..
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~----------------~eGwGLt~--Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~----- 172 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYS----------------GEGWGLCY--WNGKLVRSD-GGTMLTFHEPDGFALVGAVQ----- 172 (268)
T ss_dssp EEEEEETTTTEEEEEEECS----------------SCCCCEEE--ETTEEEEEC-SSSEEEEECTTTCCEEEEEE-----
T ss_pred EEEEEECCcCcEEEEEeCC----------------CceeEEec--CCCEEEEEC-CCCEEEEEcCCCCeEEEEEE-----
Confidence 9999999887654 44311 13456764 466999999 69999999999866542111
Q ss_pred CCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCC-CCCCCcccccccCCCce
Q 001380 818 PDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKA-GFKDGAALAAQLSEPAG 896 (1089)
Q Consensus 818 ~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~-g~~~g~~~~~~l~~P~g 896 (1089)
.+.. + ..+..+..+.+. +|.||++.+..+.|.+||++++.+......+.- .... .......+-|+|
T Consensus 173 ------V~~~-g----~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~-~~~~~~~~vlNG 239 (268)
T 3nok_A 173 ------VKLR-G----QPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVA-GQVTNPEAVLNG 239 (268)
T ss_dssp ------CEET-T----EECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHT-TTCCCTTCCEEE
T ss_pred ------eCCC-C----cccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCccccc-ccccCcCCceEE
Confidence 0000 0 113455667776 889999999999999999999988665543210 0000 000113457999
Q ss_pred EEEccCC-cEEEEECCCCEEEEEeC
Q 001380 897 IIEAQNG-NLFIADTNNNIIRYLDL 920 (1089)
Q Consensus 897 i~vd~~G-~lyVad~~n~~I~~~~~ 920 (1089)
||+|+++ +|||+.-.=.++..+.+
T Consensus 240 IA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 240 IAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEEcCCCCEEEEeCCCCCceEEEEE
Confidence 9999865 69999876667766654
No 330
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.38 E-value=1.1e-12 Score=126.12 Aligned_cols=89 Identities=22% Similarity=0.444 Sum_probs=80.0
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|++++++++++ +.++.|++ |.+.++++.|
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~---------------------------~~~~~l~~~~ 90 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNI---------------------------DQNPGTAPKY 90 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEET---------------------------TTCCTTSGGG
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEEC---------------------------CCCHHHHHHc
Confidence 6899999999999999999999999999999864 99999965 3345788999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++
T Consensus 91 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 91 GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 99999999999 99999999999999999999988765
No 331
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.38 E-value=8.2e-13 Score=122.66 Aligned_cols=89 Identities=25% Similarity=0.403 Sum_probs=80.3
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.++++++++. +.++.|++ |.+.++++.|
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~---------------------------~~~~~~~~~~ 71 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNV---------------------------DENQKIADKY 71 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEET---------------------------TTCHHHHHHT
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEcc---------------------------ccCHHHHHhc
Confidence 5899999999999999999999999999999864 88888854 4567899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++
T Consensus 72 ~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 72 SVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99999999999 99999999999999999999888765
No 332
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.37 E-value=6.3e-13 Score=122.92 Aligned_cols=87 Identities=16% Similarity=0.182 Sum_probs=69.2
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.+.+++++|+ ++.++.|++ |.+.+++++|
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~---------------------------~~~~~l~~~~ 67 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILL---------------------------QDMQEIAGRY 67 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEE---------------------------CCC-------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEEC---------------------------CCCHHHHHhc
Confidence 67999999999999999999999999999985 588888854 4556889999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+++
T Consensus 68 ~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 68 AVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLF 103 (105)
T ss_dssp --CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTT
T ss_pred CCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHh
Confidence 99999999999 6999999999999999888887754
No 333
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.37 E-value=4.1e-10 Score=135.90 Aligned_cols=256 Identities=11% Similarity=0.054 Sum_probs=180.0
Q ss_pred EeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEEC
Q 001380 608 IDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDF 686 (1089)
Q Consensus 608 vd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~ 686 (1089)
.|+ ++.+||+....++|.++|.+ ++++.++..+ ..|++++++|+|+++||++. .+.|.+||+
T Consensus 163 ~d~-~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g---------------~~p~~v~~SpDGr~lyv~~~-dg~V~viD~ 225 (567)
T 1qks_A 163 WDL-ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG---------------YAVHISRLSASGRYLFVIGR-DGKVNMIDL 225 (567)
T ss_dssp CCG-GGEEEEEETTTTEEEEEETTTCCEEEEEECS---------------SCEEEEEECTTSCEEEEEET-TSEEEEEET
T ss_pred cCC-CceEEEEeCCCCeEEEEECCCCeEEEEEeCC---------------CCccceEECCCCCEEEEEcC-CCeEEEEEC
Confidence 454 67899999999999999987 6777777654 26899999999999999984 678999999
Q ss_pred C--CC-eEEEEecCCCCCCCCCCCCcccccccCCceeEEEe----cCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCcc
Q 001380 687 V--ND-TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYK----PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759 (1089)
Q Consensus 687 ~--~g-~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~----~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~ 759 (1089)
. ++ .+.++. .| ..|.+++++ |+|+++|+++...++|..+|..+.++......+..
T Consensus 226 ~~~t~~~v~~i~-~G-----------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~ 287 (567)
T 1qks_A 226 WMKEPTTVAEIK-IG-----------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM 287 (567)
T ss_dssp TSSSCCEEEEEE-CC-----------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEE
T ss_pred CCCCCcEeEEEe-cC-----------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccc
Confidence 4 43 444443 22 268999999 69999999999999999999887765443221110
Q ss_pred ccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCc
Q 001380 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHP 839 (1089)
Q Consensus 760 ~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P 839 (1089)
. .++... ..-..+.+|..++++..++++..+++.|..++..+.....+..- . .-.+|
T Consensus 288 ~-~~~~~~--~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-----------~---------~~~~~ 344 (567)
T 1qks_A 288 T-YDEQEY--HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-----------S---------AERFL 344 (567)
T ss_dssp C-TTTCCE--ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-----------E---------CCSSE
T ss_pred c-cccccc--cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-----------e---------ccccc
Confidence 0 000000 00113468888888878889989999999999875432211110 0 01368
Q ss_pred eEEEEccCCc-EEEEeCCCCEEEEEeCCCCeEEEEecc-CCCCCCCCcccccccCCC-ceEE-EccC-CcEEEEE-CCCC
Q 001380 840 LGVYCAKNGQ-IYVADSYNHKIKKLDPASNRVSTLAGI-GKAGFKDGAALAAQLSEP-AGII-EAQN-GNLFIAD-TNNN 913 (1089)
Q Consensus 840 ~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~v~t~~g~-g~~g~~~g~~~~~~l~~P-~gi~-vd~~-G~lyVad-~~n~ 913 (1089)
.++.++++|+ +||++...++|.++|.+++.+...... + ...+| .|.. ++++ |.+|++. .+++
T Consensus 345 ~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg------------~~Phpg~g~~~~~p~~g~v~~t~~~g~~ 412 (567)
T 1qks_A 345 HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGG------------QTPHPGRGANFVHPTFGPVWATSHMGDD 412 (567)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS------------SSBCCTTCEEEEETTTEEEEEEEBSSSS
T ss_pred cCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccC------------cCCCCccceeeECCCCCcEEEeCCCCCC
Confidence 8999999995 889999999999999999887655433 2 22334 3655 4665 5788865 4678
Q ss_pred EEEEEeCCCC------CceEEEEeec
Q 001380 914 IIRYLDLNKE------EPELQTLELK 933 (1089)
Q Consensus 914 ~I~~~~~~~~------~~~~~~l~~~ 933 (1089)
.|.+|+.... -..+.++...
T Consensus 413 ~Vsvid~~~~~~~~~~~kvv~~i~~~ 438 (567)
T 1qks_A 413 SVALIGTDPEGHPDNAWKILDSFPAL 438 (567)
T ss_dssp EEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred eEEEecCCCCCCccccCEEEEEEecC
Confidence 9999998762 1246677643
No 334
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.37 E-value=6.6e-13 Score=128.56 Aligned_cols=94 Identities=20% Similarity=0.280 Sum_probs=80.1
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHH--HHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLE--FLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~--~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
.+||++||+||++||++|+.+.|.|. ++.+++++ ++.++.|+++. .|...+++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~------------------------~~~~~~l~ 81 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN------------------------FDRNLELS 81 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT------------------------TTSSHHHH
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc------------------------ccchHHHH
Confidence 46899999999999999999999999 99988864 48899996521 25677899
Q ss_pred HHhCC---CceeEEEEECCCCcEEEEecC-------CCchhhHHHHHHHHH
Q 001380 529 RELGV---NSWPTFAVVGPNGKLLAQLAG-------EGHRKDLDDLVEAAL 569 (1089)
Q Consensus 529 ~~~~v---~~~Pt~~lid~~G~i~~~~~G-------~~~~~~l~~~l~~~l 569 (1089)
+.|+| .++|+++++|++|+++.++.| ....+.+.++|+.+.
T Consensus 82 ~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 82 QAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 99999 999999999999999999888 567778888877653
No 335
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.37 E-value=7.7e-11 Score=125.21 Aligned_cols=203 Identities=15% Similarity=0.174 Sum_probs=138.0
Q ss_pred ceeEEeeCCCEEEEEECCC--CEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCC
Q 001380 660 QGLAYNAKKNLLYVADTEN--HALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQ 737 (1089)
Q Consensus 660 ~gla~d~~g~~lyVaD~~n--~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~ 737 (1089)
|||.++ ++ .||++.... +.|+++|+++|++..-...+.. ...-|++++ ++.||++.+.+
T Consensus 46 qGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~---------------~FgeGit~~--g~~ly~ltw~~ 106 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGKR---------------YFGEGISDW--KDKIVGLTWKN 106 (262)
T ss_dssp EEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCTT---------------CCEEEEEEE--TTEEEEEESSS
T ss_pred ceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCCc---------------cceeEEEEe--CCEEEEEEeeC
Confidence 999998 55 699997654 5999999999887655432210 122445554 67999999999
Q ss_pred cEEEEEECCCCeEE-EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE-EEecCCC
Q 001380 738 HQIWEHSTVDGVTR-AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR-LLAGGDP 815 (1089)
Q Consensus 738 ~~I~~~~~~~g~~~-~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~-~~~g~~~ 815 (1089)
+.+++||+.+..+. .+.-. ..+.|++ ++|+.||++| ++++|+.+|+.+..+. .+.-+
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~----------------~eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~-- 165 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYD----------------GEGWGLT--HNDQYLIMSD-GTPVLRFLDPESLTPVRTITVT-- 165 (262)
T ss_dssp SEEEEEETTTCCEEEEEECS----------------SCCCCEE--ECSSCEEECC-SSSEEEEECTTTCSEEEEEECE--
T ss_pred CEEEEEECccCcEEEEEECC----------------CCceEEe--cCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEec--
Confidence 99999999877544 44411 1345666 4566999999 5899999999976653 22110
Q ss_pred CCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcc-cccccCCC
Q 001380 816 IFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAA-LAAQLSEP 894 (1089)
Q Consensus 816 ~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~-~~~~l~~P 894 (1089)
.. | ..+.++..+.+. +|.||++.+..+.|.+||++++.+........ ...... .....+-|
T Consensus 166 ----------~~-g----~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~--L~~~~~~~~~~~~vl 227 (262)
T 3nol_A 166 ----------AH-G----EELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNG--ILAEAGPLPSPIDVL 227 (262)
T ss_dssp ----------ET-T----EECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTT--GGGGSCSCCSSCCCE
T ss_pred ----------cC-C----ccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCc--CccccccccCcCCce
Confidence 00 0 013345566665 89999999999999999999998876554321 000000 11234679
Q ss_pred ceEEEccCC-cEEEEECCCCEEEEEeC
Q 001380 895 AGIIEAQNG-NLFIADTNNNIIRYLDL 920 (1089)
Q Consensus 895 ~gi~vd~~G-~lyVad~~n~~I~~~~~ 920 (1089)
+|||+|+++ +|||+.-+=.++..+.+
T Consensus 228 NGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 999999865 69999876666666554
No 336
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.37 E-value=5.7e-13 Score=123.03 Aligned_cols=88 Identities=25% Similarity=0.425 Sum_probs=77.6
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|+++.+++++. +.++.|++ |.+.++++.|
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~---------------------------~~~~~~~~~~ 67 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNV---------------------------DENPETTSQF 67 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEEC---------------------------cCCHHHHHHc
Confidence 6789999999999999999999999999999864 88898865 4456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+++
T Consensus 68 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 68 GIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTT
T ss_pred CCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHH
Confidence 99999999999 8999999999998888887777543
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.36 E-value=5.8e-11 Score=133.00 Aligned_cols=220 Identities=16% Similarity=0.268 Sum_probs=146.9
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecC---CCEEEE
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI---NEKVYI 732 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~---g~~lyv 732 (1089)
+..|.+|+++|+|. |||++...++|++++.+++..+.+.....- .......|.||+++|+ ++.||+
T Consensus 31 L~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v----------~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 31 LNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGV----------SPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTC----------CCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred CCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCce----------eecCCCCceeeEeccccccCCEEEE
Confidence 67999999999998 999998889999999877777666432110 0111347899999995 569999
Q ss_pred EEC--CCcEEEEEECCCC---------eEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeC---------
Q 001380 733 AMA--GQHQIWEHSTVDG---------VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS--------- 792 (1089)
Q Consensus 733 ad~--~~~~I~~~~~~~g---------~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~--------- 792 (1089)
+.. ..++|.++...++ ....+.+.. .........|++++|| .|||+..
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p-----------~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~q 167 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIP-----------KGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQ 167 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEEC-----------CCSSCCCCCEEECTTS-CEEEECBCTTCGGGTT
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCC-----------CCCCccCccccCCCCC-CEEEEECCCCCCcccc
Confidence 753 5678998877652 111222110 0123457789999998 9999942
Q ss_pred ----CCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCC---EEEEEeC
Q 001380 793 ----ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNH---KIKKLDP 865 (1089)
Q Consensus 793 ----~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~---~I~~~d~ 865 (1089)
..++|.++++++. +..+++.....++..| +.+|.|++++++|.||++|.+.. +|.++.+
T Consensus 168 d~~~~~G~IlRi~~dG~----ip~~nPf~~~~i~a~G----------~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~ 233 (347)
T 3das_A 168 DRKSLGGKILRMTPDGE----PAPGNPFPGSPVYSYG----------HRNVQGLAWDDKQRLFASEFGQDTWDELNAIKP 233 (347)
T ss_dssp CTTCSTTCEEEECTTSS----BCTTCSSTTCCEEEBC----------CSBCCEEEECTTCCEEEEECCSSSCEEEEEECT
T ss_pred CCCCCCCEEEEEeCCCC----ccCCCCCCCCeEEeeC----------CCCcceEEECCCCCEEEEecCCCCCceeeEEcC
Confidence 3578999998743 1222232222344555 45799999999999999998753 4444432
Q ss_pred CCCeEEEEeccCCCCCCC--C------cc----c-ccccCCCceEEEccCCcEEEEECCCCEEEEEeCCCC
Q 001380 866 ASNRVSTLAGIGKAGFKD--G------AA----L-AAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 866 ~~~~v~t~~g~g~~g~~~--g------~~----~-~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~~ 923 (1089)
.+..|+.. | .. . ......|.||++. +|.+|+++..+.+|.++.+++.
T Consensus 234 ----------G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~ 293 (347)
T 3das_A 234 ----------GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGT 293 (347)
T ss_dssp ----------TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETT
T ss_pred ----------CCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCC
Confidence 12222211 1 00 0 0011478999998 5899999999999999988765
No 338
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.36 E-value=3.9e-10 Score=118.89 Aligned_cols=206 Identities=17% Similarity=0.184 Sum_probs=140.4
Q ss_pred CcceeEEeeCCCEEEEEECC--CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC
Q 001380 658 RPQGLAYNAKKNLLYVADTE--NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA 735 (1089)
Q Consensus 658 ~P~gla~d~~g~~lyVaD~~--n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~ 735 (1089)
.-|||.++. +.||++... .+.|+++|+++|++..-...+.. ...-|++++ ++.||++.+
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~---------------~fgeGi~~~--~~~ly~ltw 82 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP---------------YFGAGIVAW--RDRLIQLTW 82 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT---------------CCEEEEEEE--TTEEEEEES
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC---------------cceeEEEEe--CCEEEEEEe
Confidence 459999984 569999765 46999999999887665432210 123455554 689999999
Q ss_pred CCcEEEEEECCCCeEE-EEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE-EEecC
Q 001380 736 GQHQIWEHSTVDGVTR-AFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR-LLAGG 813 (1089)
Q Consensus 736 ~~~~I~~~~~~~g~~~-~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~-~~~g~ 813 (1089)
.++.+++||..+..+. ++.-. ..+.||+ .++++||++| ++++|..+|+.+..+. .+.-+
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~----------------~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYP----------------GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECS----------------SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred eCCEEEEEECCcCcEEEEEeCC----------------CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEc
Confidence 9999999999887654 44411 1345666 4566999999 5899999999876653 22111
Q ss_pred CCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCccc--cccc
Q 001380 814 DPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAAL--AAQL 891 (1089)
Q Consensus 814 ~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~--~~~l 891 (1089)
.. + ..+.++..+.+. +|.||++.+..+.|.+||++++.+......+. ....... ....
T Consensus 144 ------------~~-g----~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~--l~~~~~~~~~~~~ 203 (243)
T 3mbr_X 144 ------------AG-G----RPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQA--LVPDADALTDSTN 203 (243)
T ss_dssp ------------ET-T----EECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGG--GSTTTTSCCCTTS
T ss_pred ------------cC-C----cccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCc--CccccccccCCcC
Confidence 00 0 013345566665 88999999999999999999998866554321 1000000 1234
Q ss_pred CCCceEEEccCC-cEEEEECCCCEEEEEeCC
Q 001380 892 SEPAGIIEAQNG-NLFIADTNNNIIRYLDLN 921 (1089)
Q Consensus 892 ~~P~gi~vd~~G-~lyVad~~n~~I~~~~~~ 921 (1089)
+-|+|||.|+++ +|||+.-.=.++..+.+.
T Consensus 204 ~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 204 DVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp SCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 679999999854 699998776777766654
No 339
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.36 E-value=1.2e-10 Score=130.51 Aligned_cols=232 Identities=12% Similarity=0.057 Sum_probs=156.6
Q ss_pred eEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEE
Q 001380 614 RLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR 692 (1089)
Q Consensus 614 ~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~ 692 (1089)
.++++....++|.++|.. ++.+..+...+. ...|.+++++++|+.+|+++..++.|+.+|+.++.+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADA------------GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL 69 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTC------------TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCC------------CCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeE
Confidence 467788888999999986 566666654311 1148999999999889999998999999999887655
Q ss_pred EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC-----------CCcEEEEEECCCCeEEEEeCCCcccc
Q 001380 693 TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA-----------GQHQIWEHSTVDGVTRAFSGDGYERN 761 (1089)
Q Consensus 693 ~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~-----------~~~~I~~~~~~~g~~~~~~g~g~~~~ 761 (1089)
.....+..+. .-..|.+++++|+|+.||+++. ..+.|+.+|..++........+
T Consensus 70 ~~~~~~~~~~-----------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---- 134 (337)
T 1pby_B 70 GRIDLSTPEE-----------RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP---- 134 (337)
T ss_dssp EEEECCBTTE-----------EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC----
T ss_pred eeEEcCCccc-----------ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC----
Confidence 4332221000 0125889999999999999963 3589999999887665433111
Q ss_pred CCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceE
Q 001380 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG 841 (1089)
Q Consensus 762 ~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~g 841 (1089)
..|.+++++++|+.||++ ++.|+.++..++.......... . ..|
T Consensus 135 -----------~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~-----------~---------~~~-- 178 (337)
T 1pby_B 135 -----------RQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQS-----------W---------EAE-- 178 (337)
T ss_dssp -----------SSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTT-----------T---------TTT--
T ss_pred -----------CCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccc-----------c---------CCC--
Confidence 247899999999889999 4789999998776543221100 0 001
Q ss_pred EEEccCCc-EEEEeCCCC-----------------------EEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceE
Q 001380 842 VYCAKNGQ-IYVADSYNH-----------------------KIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGI 897 (1089)
Q Consensus 842 va~~~~G~-lyVaD~~n~-----------------------~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi 897 (1089)
++++++|. +|++....+ .|..+|..++.+.++.-.. .-..|.++
T Consensus 179 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~------------~~~~~~~~ 246 (337)
T 1pby_B 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI------------MDVFYFST 246 (337)
T ss_dssp TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE------------CSSCEEEE
T ss_pred ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC------------CCCceeeE
Confidence 12233332 333332222 6788999888776432110 12458899
Q ss_pred EEccCCc-EEEEECCCCEEEEEeCCCC
Q 001380 898 IEAQNGN-LFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 898 ~vd~~G~-lyVad~~n~~I~~~~~~~~ 923 (1089)
+++++|+ ||++ ++.|.++++.+.
T Consensus 247 ~~s~dg~~l~~~---~~~v~~~d~~~~ 270 (337)
T 1pby_B 247 AVNPAKTRAFGA---YNVLESFDLEKN 270 (337)
T ss_dssp EECTTSSEEEEE---ESEEEEEETTTT
T ss_pred EECCCCCEEEEe---CCeEEEEECCCC
Confidence 9999986 7877 589999999876
No 340
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.36 E-value=1.8e-12 Score=120.00 Aligned_cols=89 Identities=28% Similarity=0.471 Sum_probs=78.8
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|+++++++++. +.++.|++ |.+.++++.|
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~---------------------------~~~~~~~~~~ 69 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNT---------------------------DESPNVASEY 69 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEET---------------------------TTCHHHHHHH
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEEC---------------------------CCCHHHHHHC
Confidence 5799999999999999999999999999999864 88899864 4456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++
T Consensus 70 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 70 GIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp TCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999998888 79999999999998888888887654
No 341
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.36 E-value=1.7e-12 Score=121.48 Aligned_cols=90 Identities=26% Similarity=0.466 Sum_probs=79.7
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|.++++++++. +.++.|++ |.+.++++.|
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~---------------------------~~~~~~~~~~ 73 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNI---------------------------DENPGTAAKY 73 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEc---------------------------CCCHHHHHhC
Confidence 5799999999999999999999999999999764 88999965 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+++++
T Consensus 74 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 74 GVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999998888 899999999999989999998887663
No 342
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.36 E-value=1.9e-12 Score=120.91 Aligned_cols=90 Identities=23% Similarity=0.341 Sum_probs=75.3
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.++|++||+||++||++|+.+.|.|.+++++++ ++.++.|+++ +.+.++++
T Consensus 21 ~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~--------------------------~~~~~~~~ 72 (111)
T 2pu9_C 21 AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCN--------------------------QENKTLAK 72 (111)
T ss_dssp TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS--------------------------STTHHHHH
T ss_pred hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecC--------------------------cchHHHHH
Confidence 3468999999999999999999999999999987 3888888641 24578999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
.|+|.++|+ ++++++|+++.++.|.. .+.+.++|+.++
T Consensus 73 ~~~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 73 ELGIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp HHCCSBSSE-EEEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred HcCCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 999999999 55669999999999874 777877777654
No 343
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.36 E-value=2.1e-12 Score=122.41 Aligned_cols=89 Identities=24% Similarity=0.371 Sum_probs=79.6
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|+++++++++ ++.++.|++ |.+.++++.|
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~---------------------------d~~~~l~~~~ 81 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDI---------------------------DDHTDLAIEY 81 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEET---------------------------TTTHHHHHHT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeC---------------------------CCCHHHHHHc
Confidence 578999999999999999999999999999876 488999965 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++
T Consensus 82 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 82 EVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 99999999999 89999999999988999998888765
No 344
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.36 E-value=2.1e-12 Score=120.78 Aligned_cols=91 Identities=19% Similarity=0.328 Sum_probs=75.7
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.+++++++..++.++.|++ |.+.++++.|
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~---------------------------~~~~~~~~~~ 72 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDA---------------------------DENSEISELF 72 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEec---------------------------ccCHHHHHHc
Confidence 4899999999999999999999999999997545689999965 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+|.++|+++++ ++|+++.++.|.. .+++.++|++++..
T Consensus 73 ~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~~~~ 110 (112)
T 3d6i_A 73 EISAVPYFIII-HKGTILKELSGAD-PKEYVSLLEDCKNS 110 (112)
T ss_dssp TCCSSSEEEEE-ETTEEEEEECSCC-HHHHHHHHHHHHHH
T ss_pred CCCcccEEEEE-ECCEEEEEecCCC-HHHHHHHHHHHHhh
Confidence 99999999988 7999999999974 45688888877653
No 345
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.36 E-value=2.1e-12 Score=123.40 Aligned_cols=87 Identities=24% Similarity=0.433 Sum_probs=76.0
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|++++++|+ ++.++.|++ |.+.+++++|
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~---------------------------d~~~~l~~~~ 87 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDT---------------------------DELKSVASDW 87 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEET---------------------------TTSHHHHHHT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEEC---------------------------ccCHHHHHHc
Confidence 68999999999999999999999999999987 599999964 4566899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|. +.+.+.++|++++
T Consensus 88 ~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 123 (124)
T 1xfl_A 88 AIQAMPTFMFL-KEGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred CCCccCEEEEE-ECCEEEEEEeCC-CHHHHHHHHHHhc
Confidence 99999998887 899999999984 7777877776653
No 346
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.35 E-value=1.9e-12 Score=126.77 Aligned_cols=95 Identities=16% Similarity=0.094 Sum_probs=78.4
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|+|||+|||+||++|+.+.|.|+++++++++. +.++.|++ |.+.++++.|
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~---------------------------d~~~~~~~~~ 73 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDI---------------------------TEVPDFNKMY 73 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEET---------------------------TTCCTTTTSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEcc---------------------------ccCHHHHHHc
Confidence 4899999999999999999999999999999754 99999965 3445688999
Q ss_pred CCCceeEEEEECCCCcEEEE---------ecCCCc-hhhHHHHHHHHHHHhccc
Q 001380 532 GVNSWPTFAVVGPNGKLLAQ---------LAGEGH-RKDLDDLVEAALLFYGKK 575 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~---------~~G~~~-~~~l~~~l~~~l~~~~~~ 575 (1089)
+|.++|+++++ .+|+++.. +.|... .+++.+.|+.+++.....
T Consensus 74 ~i~~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~~~~ 126 (142)
T 1qgv_A 74 ELYDPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKG 126 (142)
T ss_dssp CSCSSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHHHTTT
T ss_pred CCCCCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHHhcC
Confidence 99999999999 68988874 344443 788889998888765433
No 347
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.35 E-value=8e-11 Score=136.06 Aligned_cols=222 Identities=12% Similarity=0.028 Sum_probs=141.9
Q ss_pred CCCceEEEeecCCeEEEEeC---------CCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCE
Q 001380 601 KFPGKLAIDILNNRLFISDS---------NHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~---------~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~ 670 (1089)
..| ++++++++.+|||+++ ..+.|.++|.. ++.+..|..++...+. .-..|.+++++++|++
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~-------~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL-------VGTYQWMNALTPDNKN 190 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC-------BSCCGGGSEECTTSSE
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc-------cCCCcceEEEcCCCCE
Confidence 358 9999998889999996 35689999986 6777766543111100 1247999999999999
Q ss_pred EEEEECC-CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCcee----EEE----------------------
Q 001380 671 LYVADTE-NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWD----VCY---------------------- 723 (1089)
Q Consensus 671 lyVaD~~-n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~----la~---------------------- 723 (1089)
+||++.. .+.|.+||+.++++..-...+.. ....|.+ +++
T Consensus 191 lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-------------~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~ 257 (426)
T 3c75_H 191 LLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-------------YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTE 257 (426)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEEECCSE-------------EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECC
T ss_pred EEEEecCCCCeEEEEECCCCeEEEEEEcCCc-------------eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeee
Confidence 9999975 78999999998776433222110 0011222 333
Q ss_pred ---------------ecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCce---EEEcCCCC
Q 001380 724 ---------------KPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG---ISLSPDFM 785 (1089)
Q Consensus 724 ---------------~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~g---lav~~~g~ 785 (1089)
+++++.+|+... .+.|+.+|..++.+.....- . ...... ......|.| ++++++++
T Consensus 258 ~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~--~--~~~~~~-i~~g~~p~g~~~va~s~dg~ 331 (426)
T 3c75_H 258 VFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPI--E--ALTEAE-RADDWRPGGWQQTAYHRQSD 331 (426)
T ss_dssp CCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCE--E--SSCTTT-GGGTEEECSSSCEEEEGGGT
T ss_pred eeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeee--e--eccccc-cccccccCCceeeEEcCCCC
Confidence 444444444432 24455555444333221100 0 000000 001113555 89999999
Q ss_pred EEEEEeC---------CCCeEEEEEcCCCCeE-EEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc--EEEE
Q 001380 786 EIYVADS---------ESSSIRALNLKTGGSR-LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ--IYVA 853 (1089)
Q Consensus 786 ~lyvad~---------~~~~I~~~~~~~~~~~-~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~--lyVa 853 (1089)
++||++. .++.|.+||..+..+. .+..+ ..|.+|++++||+ +|++
T Consensus 332 rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-----------------------~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 332 RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-----------------------HEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-----------------------EEECEEEECCSSSCEEEEE
T ss_pred EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-----------------------CCcCeEEEccCCCEEEEEE
Confidence 9999974 2458999999887654 22211 2599999999986 8999
Q ss_pred eCCCCEEEEEeCCCCeEEE
Q 001380 854 DSYNHKIKKLDPASNRVST 872 (1089)
Q Consensus 854 D~~n~~I~~~d~~~~~v~t 872 (1089)
+..++.|.+||.+++++..
T Consensus 389 n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 389 SAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp ETTTTEEEEEETTTCCEEE
T ss_pred cCCCCeEEEEECCCCCEEE
Confidence 9889999999998887653
No 348
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.35 E-value=1.7e-12 Score=119.88 Aligned_cols=89 Identities=22% Similarity=0.447 Sum_probs=79.1
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
+++|++||+||++||++|+.+.|.+++++++++++ +.++.|++ |.+.++++.
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~---------------------------~~~~~~~~~ 68 (106)
T 3die_A 17 VESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDV---------------------------DENPSTAAK 68 (106)
T ss_dssp SCSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEET---------------------------TTCHHHHHH
T ss_pred hcCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEC---------------------------CcCHHHHHh
Confidence 38899999999999999999999999999999865 88888865 456689999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
|+|.++|+++++ ++|+++.++.|..+.+.+.++|+++
T Consensus 69 ~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 69 YEVMSIPTLIVF-KDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp TTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred CCCcccCEEEEE-eCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 999999999999 5999999999998988888887653
No 349
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=99.35 E-value=4.4e-13 Score=148.49 Aligned_cols=128 Identities=12% Similarity=0.082 Sum_probs=101.7
Q ss_pred CCCccHHHHHHHHHhC-CCeEEEEcCC---------------------ChHhHHHHHHHCCCCCCCccEE----------
Q 001380 165 IGFPGALELINQCKSK-GLKVAVASSA---------------------DRIKVDANLAAAGLPVSMFDAI---------- 212 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~-Gi~vaIvSn~---------------------~~~~~~~~l~~~gl~~~~fd~i---------- 212 (1089)
...+++.++++.|+++ |+++++.|+. ....+...++..|+. .+|+.+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVS-VNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEE-EEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCC-EEEEEccccccCCCCc
Confidence 4578999999999998 9999999976 456777888888885 666554
Q ss_pred EEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHH
Q 001380 213 VSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLN 292 (1089)
Q Consensus 213 ~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~ 292 (1089)
++.+.....++++..++.+++++|+++++|++|||+.+|+.+++.+|+ .|..+...+++++ .+++++.+..+-.+.
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~---~~~~~~~~~~~~~-~a~~v~~~~~~~gv~ 276 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGN---GYLLKNATQEAKN-LHNLITDSEYSKGIT 276 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSE---EEECTTCCHHHHH-HCCCBCSSCHHHHHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCc---EEEECCccHHHHH-hCCEEcCCCCcCHHH
Confidence 556667788999999999999999999999999999999999999994 3444444445544 478888887775555
Q ss_pred HHHhc
Q 001380 293 DILTG 297 (1089)
Q Consensus 293 ~ll~~ 297 (1089)
+++..
T Consensus 277 ~~~~~ 281 (289)
T 3gyg_A 277 NTLKK 281 (289)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 350
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.34 E-value=6.1e-11 Score=135.02 Aligned_cols=236 Identities=14% Similarity=0.149 Sum_probs=141.9
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEE-EEecCCCCCCCCCCCCcccccccCCceeEEEecC---CCEEE
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVR-TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI---NEKVY 731 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~-~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~---g~~ly 731 (1089)
+..|.+|+++++|+.|||++. .++|++++.+ +... .+++...-. ......|.+|+++|+ ++.||
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~-g~~~~~~~~~~~v~----------~~g~~g~~gia~~pdf~~~g~lY 84 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLR-GGELRHWQAG-KGLSAPLSGVPDVW----------AHGQGGLLDVVLAPDFAQSRRIW 84 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEET-TTEEEEEETT-TEECCCCBSCCCCC----------CSTTCSEEEEEECTTHHHHCEEE
T ss_pred CCCcEEEEEcCCCCEEEEEeC-CceEEEEeCC-CceeeEecCCcccc----------cCCCCCceeEEECCCCCCCCEEE
Confidence 678999999999876899997 4799999964 4433 333221100 011236799999996 66999
Q ss_pred EEECC-------CcEEEEEECCCC--eE---EE-EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC-----
Q 001380 732 IAMAG-------QHQIWEHSTVDG--VT---RA-FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE----- 793 (1089)
Q Consensus 732 vad~~-------~~~I~~~~~~~g--~~---~~-~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~----- 793 (1089)
|++.. .++|++++..++ .+ +. +.+.. ........+.+|++++|| +|||+...
T Consensus 85 v~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p---------~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~ 154 (353)
T 2g8s_A 85 LSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMP---------KLSTGNHFGGRLVFDGKG-YLFIALGENNQRP 154 (353)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSS---------CCBSSSCCCCCEEECSSS-EEEEEECCTTCGG
T ss_pred EEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECC---------CCCCCcccCccEEECCCC-cEEEEECCCCCCC
Confidence 99865 468888876543 22 11 11110 001234568899999999 99999633
Q ss_pred --------CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCC-CCccccccccCceEEEEcc-CCcEEEEeCCCC---EE
Q 001380 794 --------SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDR-DGMGSEVLLQHPLGVYCAK-NGQIYVADSYNH---KI 860 (1089)
Q Consensus 794 --------~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~-dg~~~~~~l~~P~gva~~~-~G~lyVaD~~n~---~I 860 (1089)
.++|.++++++. +..+ +.|..... .......-+.+|.|+++|+ +|+||++|.+.+ +|
T Consensus 155 ~~q~~~~~~g~I~ri~~dG~----~p~~------npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei 224 (353)
T 2g8s_A 155 TAQDLDKLQGKLVRLTDQGE----IPDD------NPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEI 224 (353)
T ss_dssp GGGCTTSCTTEEEEEETTSC----CCTT------CTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEE
T ss_pred ccCCCCCCCeEEEEECCCCC----CCCC------CCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEE
Confidence 358999998742 1112 22211000 0000112256899999999 899999998754 55
Q ss_pred EEEeCCCCe----EE---EEecc--------CCCCCCCCcccccccCCCceEEEcc-------CCcEEEEECCCCEEEEE
Q 001380 861 KKLDPASNR----VS---TLAGI--------GKAGFKDGAALAAQLSEPAGIIEAQ-------NGNLFIADTNNNIIRYL 918 (1089)
Q Consensus 861 ~~~d~~~~~----v~---t~~g~--------g~~g~~~g~~~~~~l~~P~gi~vd~-------~G~lyVad~~n~~I~~~ 918 (1089)
.++.+.++. +. .+.+. ...++..-......-..|.|+++.. +|++||++...++|.++
T Consensus 225 ~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~ 304 (353)
T 2g8s_A 225 NIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVM 304 (353)
T ss_dssp ECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEE
T ss_pred eEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEE
Confidence 555432211 00 00000 0000000000001124689999963 57899999999999999
Q ss_pred eCCCC
Q 001380 919 DLNKE 923 (1089)
Q Consensus 919 ~~~~~ 923 (1089)
++++.
T Consensus 305 ~~~~~ 309 (353)
T 2g8s_A 305 SVNGD 309 (353)
T ss_dssp EEETT
T ss_pred EeCCC
Confidence 99864
No 351
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.34 E-value=3.5e-12 Score=118.94 Aligned_cols=90 Identities=21% Similarity=0.436 Sum_probs=80.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.+.++++++++ .+.++.|++ |.+.+++++|
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~---------------------------~~~~~l~~~~ 72 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDV---------------------------EEEKTLFQRF 72 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEET---------------------------TTCHHHHHHT
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEEC---------------------------CcChhHHHhc
Confidence 579999999999999999999999999999986 488888865 4566899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++.
T Consensus 73 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 73 SLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp TCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 99999999999 899999999999999999999988764
No 352
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.34 E-value=2.8e-10 Score=137.35 Aligned_cols=265 Identities=12% Similarity=0.113 Sum_probs=177.2
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeC---CCCEEEEEecCCCCCCCCCCCCccccCCcceeEEe----eCCCEEEEE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDL---DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN----AKKNLLYVA 674 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~---~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d----~~g~~lyVa 674 (1089)
.|.++++++++.+|||++. .+.|.++|. .++.+.++..+ ..|.+++++ |+|+++||+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~~G---------------~~P~~ia~s~~~~pDGk~l~v~ 261 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIG---------------SEARSIETSKMEGWEDKYAIAG 261 (567)
T ss_dssp CEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEECC---------------SEEEEEEECCSTTCTTTEEEEE
T ss_pred CccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEecC---------------CCCceeEEccccCCCCCEEEEE
Confidence 5778999997788999875 679999998 56777776543 268999999 699999999
Q ss_pred ECCCCEEEEEECCCCeEEEEecCCCCCCCC-----C---------------------CCCc-------------cccccc
Q 001380 675 DTENHALREIDFVNDTVRTLAGNGTKGSDY-----Q---------------------GGEK-------------GTSQLL 715 (1089)
Q Consensus 675 D~~n~~I~~~d~~~g~v~~~ag~g~~~~~~-----~---------------------~~~~-------------~~~~~l 715 (1089)
+...+.|..+|..+.++......+....+. . .+.. ..-..-
T Consensus 262 n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~ 341 (567)
T 1qks_A 262 AYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE 341 (567)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC
T ss_pred EccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc
Confidence 999999999998776544333222110000 0 0000 000011
Q ss_pred CCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCC-ceEE-EcCCCCEEEEEeC-
Q 001380 716 NSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQP-SGIS-LSPDFMEIYVADS- 792 (1089)
Q Consensus 716 ~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P-~gla-v~~~g~~lyvad~- 792 (1089)
..|+++.|+++|.++|+++.+.++|..+|..++++......| ....+| .|+. ++|+++.+|++..
T Consensus 342 ~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg------------g~~Phpg~g~~~~~p~~g~v~~t~~~ 409 (567)
T 1qks_A 342 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG------------GQTPHPGRGANFVHPTFGPVWATSHM 409 (567)
T ss_dssp SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS------------SSSBCCTTCEEEEETTTEEEEEEEBS
T ss_pred ccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc------------CcCCCCccceeeECCCCCcEEEeCCC
Confidence 367899999999999999999999999999999876544320 011234 3665 4788668998764
Q ss_pred CCCeEEEEEcCCC--------CeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCC-cEEEEeCC------C
Q 001380 793 ESSSIRALNLKTG--------GSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADSY------N 857 (1089)
Q Consensus 793 ~~~~I~~~~~~~~--------~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G-~lyVaD~~------n 857 (1089)
+++.|..|+.+++ .+..+.+. | ..+..|...++| ++||+... .
T Consensus 410 g~~~Vsvid~~~~~~~~~~~kvv~~i~~~---------------g-------~g~~~i~~~p~~~~l~v~~~~~~~~~~~ 467 (567)
T 1qks_A 410 GDDSVALIGTDPEGHPDNAWKILDSFPAL---------------G-------GGSLFIKTHPNSQYLYVDATLNPEAEIS 467 (567)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEECS---------------C-------SCCCCEECCTTCSEEEEECTTCSSHHHH
T ss_pred CCCeEEEecCCCCCCccccCEEEEEEecC---------------C-------CCCEEEEeCCCCCeEEEecCCCCCcccC
Confidence 6689999998752 12333221 0 245668888888 68887754 3
Q ss_pred CEEEEEeCCCCeE-------EEEeccCC-CCCCCCcccccccCCCceEEEccCCc-EEEEECC----CCEEEEEeCCCC
Q 001380 858 HKIKKLDPASNRV-------STLAGIGK-AGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTN----NNIIRYLDLNKE 923 (1089)
Q Consensus 858 ~~I~~~d~~~~~v-------~t~~g~g~-~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~----n~~I~~~~~~~~ 923 (1089)
+.|.+||.++..+ ..+. .+. .+... .-..|..+.++++|+ |||+.++ .+.|.++|..+.
T Consensus 468 ~~v~v~d~~~~~~~g~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 468 GSVAVFDIKAMTGDGSDPEFKTLP-IAEWAGITE------GQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp TCEEEEEGGGCCCSSSCCCEEEEC-HHHHHTCCS------SCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred ceEEEEECCcccccccCCCcEEec-cccccccCC------CCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 5899999765511 2331 000 00000 013578899999995 9999764 699999998887
No 353
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.34 E-value=3.4e-12 Score=119.80 Aligned_cols=90 Identities=20% Similarity=0.373 Sum_probs=80.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||.||++||++|+.+.|.|.++.++++++ +.++.|++ |.+.++++.|
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~---------------------------~~~~~~~~~~ 75 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEI---------------------------DPNPTTVKKY 75 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEES---------------------------TTCHHHHHHT
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEc---------------------------CCCHHHHHHc
Confidence 6899999999999999999999999999999865 89999965 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++++.
T Consensus 76 ~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 76 KVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 99999999999 999999999999899999999887764
No 354
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=4.2e-12 Score=122.69 Aligned_cols=93 Identities=16% Similarity=0.278 Sum_probs=81.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC---CCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD---MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~---~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
.+|++||+||++||++|+.+.|.+.++++++++ .++.++.|++ |.+.+++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~---------------------------~~~~~l~ 76 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDA---------------------------TVNQVLA 76 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEET---------------------------TTCCHHH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEEC---------------------------CCCHHHH
Confidence 579999999999999999999999999999872 3599999865 3456899
Q ss_pred HHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHh
Q 001380 529 RELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 529 ~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
+.|+|.++|+++++++ |+++.++.|..+.+.+.++|.+++...
T Consensus 77 ~~~~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 77 SRYGIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp HHHTCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 9999999999999976 888899999999999999999988764
No 355
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.34 E-value=2.9e-12 Score=119.74 Aligned_cols=87 Identities=26% Similarity=0.411 Sum_probs=77.4
Q ss_pred CCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHhC
Q 001380 453 GKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELG 532 (1089)
Q Consensus 453 gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~ 532 (1089)
+|++||+||++||++|+.+.|.|+++.+++++ ++.++.|++ |.+.++++.|+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~---------------------------~~~~~~~~~~~ 75 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDV---------------------------DAVAAVAEAAG 75 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEET---------------------------TTTHHHHHHHT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEEC---------------------------CchHHHHHHcC
Confidence 89999999999999999999999999999986 589999965 44678999999
Q ss_pred CCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 533 VNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 533 v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
|.++|+++++ ++|+++.++.|. +.+.+.++|++++
T Consensus 76 v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 76 ITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp CCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred CCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 9999997777 899999999998 8888888888765
No 356
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.33 E-value=2.3e-12 Score=118.34 Aligned_cols=89 Identities=24% Similarity=0.459 Sum_probs=79.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||.||++||++|+.+.|.+.++.+++++ +.++.|++ |.+.++++.|
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~---------------------------~~~~~~~~~~ 65 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNS---------------------------DENPDIAARY 65 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEET---------------------------TTCHHHHHHT
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEEC---------------------------CCCHHHHHhC
Confidence 579999999999999999999999999999975 88888865 4456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
++.++|+++++ ++|+++.++.|..+.+.+.++|+.++.
T Consensus 66 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 66 GVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred CccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 99999999999 899999999999899999999887764
No 357
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.33 E-value=1.8e-12 Score=126.46 Aligned_cols=90 Identities=20% Similarity=0.330 Sum_probs=79.7
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
.+||++||+||++||++|+.+.|.|++++++++ ++.++.|++ |.+.++++.
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~---------------------------~~~~~~~~~ 94 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDV---------------------------DELSDFSAS 94 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEET---------------------------TTSHHHHHH
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeC---------------------------cccHHHHHH
Confidence 468999999999999999999999999999985 588888865 445689999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
|+|.++|+++++ ++|+++.++.|. ..+.+.++|+.+++.
T Consensus 95 ~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 95 WEIKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp TTCCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred cCCCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 999999999888 999999999998 788898888887764
No 358
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.33 E-value=3.1e-12 Score=117.95 Aligned_cols=88 Identities=25% Similarity=0.438 Sum_probs=77.9
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.++|++||+||++||++|+.+.|.+.++++++++ +.++.|+. |...++++
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~---------------------------~~~~~~~~ 67 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDV---------------------------DDCQDVAS 67 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEET---------------------------TTCHHHHH
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEh---------------------------hhhHHHHH
Confidence 34689999999999999999999999999999975 88888854 45568999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
.|+|.++|+++++ ++|+++.++.|. +.+.+.++|+++
T Consensus 68 ~~~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 68 ESEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp HTTCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HcCCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHh
Confidence 9999999999999 899999999998 888888888765
No 359
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.33 E-value=1.4e-12 Score=130.81 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=69.0
Q ss_pred cccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 449 ~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
++++||++||+|||+||++|+.++|.|++++++++ ++.++.|+. ++ +.+++
T Consensus 50 ~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~-----d~----------------------~~~~~ 100 (167)
T 1z6n_A 50 QRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISK-----GR----------------------AEDDL 100 (167)
T ss_dssp HTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECH-----HH----------------------HHHHT
T ss_pred HHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEEC-----CC----------------------CHHHH
Confidence 56789999999999999999999999999999886 488888843 22 22344
Q ss_pred HHh---CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 529 REL---GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 529 ~~~---~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+.| ++.++||++++|.+|+++.++. . .+..+.+.+.+..
T Consensus 101 ~~~~~~~v~~iPt~i~~~~~G~~~~~~g-~-~p~~~~~~i~~~~ 142 (167)
T 1z6n_A 101 RQRLALERIAIPLVLVLDEEFNLLGRFV-E-RPQAVLDGGPQAL 142 (167)
T ss_dssp TTTTTCSSCCSSEEEEECTTCCEEEEEE-S-SCHHHHHHCHHHH
T ss_pred HHHHHcCCCCcCeEEEECCCCCEEEEEc-C-CCHHHHHhHHHHH
Confidence 444 4999999999999999988773 3 3344555555543
No 360
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.33 E-value=4e-12 Score=117.61 Aligned_cols=87 Identities=28% Similarity=0.459 Sum_probs=78.0
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||.||++||++|+.+.|.|.++.+++++ ++.++.|++ |.+.++++.|
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~---------------------------~~~~~~~~~~ 70 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNI---------------------------DDNPETPNAY 70 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEET---------------------------TTCCHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEEC---------------------------CCCHHHHHhc
Confidence 679999999999999999999999999999986 599999965 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~ 567 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|++
T Consensus 71 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 105 (107)
T 2i4a_A 71 QVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVES 105 (107)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred CCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHh
Confidence 99999999999 999999999999888888888765
No 361
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.33 E-value=1.5e-12 Score=126.09 Aligned_cols=91 Identities=19% Similarity=0.324 Sum_probs=75.0
Q ss_pred cccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 449 ~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
++.+||++||+||++||++|+.+.|.|+++.+++ ++.++.|.+ |.+.+++
T Consensus 36 ~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~---------------------------~~~~~l~ 85 (133)
T 3cxg_A 36 SSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDV---------------------------DIHPKLN 85 (133)
T ss_dssp TC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEET---------------------------TTCHHHH
T ss_pred HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEec---------------------------cchHHHH
Confidence 4567899999999999999999999999988877 478888854 3466899
Q ss_pred HHhCCCceeEEEEE-CCCCc--EEEEecCCCchhhHHHHHHHHHH
Q 001380 529 RELGVNSWPTFAVV-GPNGK--LLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 529 ~~~~v~~~Pt~~li-d~~G~--i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+.|+|.++|+++++ |++|+ ++.++.|. ..+++.++|++++.
T Consensus 86 ~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 86 DQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp HHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred HhcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 99999999999999 44555 88899988 77888888776653
No 362
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.32 E-value=7.6e-11 Score=129.18 Aligned_cols=222 Identities=9% Similarity=0.069 Sum_probs=149.1
Q ss_pred CCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCC--CCCCCCCCcccccccCCceeEEE---ecCCCEEE
Q 001380 657 NRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTK--GSDYQGGEKGTSQLLNSPWDVCY---KPINEKVY 731 (1089)
Q Consensus 657 ~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~--~~~~~~~~~~~~~~l~~P~~la~---~~~g~~ly 731 (1089)
-.|.++++|+.+..+|+++..++.|.++++.++.+..+.-.+.. +. ....|.||.+ |+. ++||
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~-----------~~~~~sGl~~~~~D~~-grL~ 80 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGD-----------GEQQMSGLSLLTHDNS-KRLF 80 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSC-----------CSEEEEEEEESSSSSC-CEEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCC-----------CcceeeEEEEeccCCC-CcEE
Confidence 47999999987788999999999999999987665554211111 11 1235789999 788 4888
Q ss_pred EE-EC------------CCcEEEEEECC---CCeEEEEeC-CCccc---cCCCCCCCCccccCCceEEEcCCCCEEEEEe
Q 001380 732 IA-MA------------GQHQIWEHSTV---DGVTRAFSG-DGYER---NLNGSSSLNTSFAQPSGISLSPDFMEIYVAD 791 (1089)
Q Consensus 732 va-d~------------~~~~I~~~~~~---~g~~~~~~g-~g~~~---~~~g~~~~~~~~~~P~glav~~~g~~lyvad 791 (1089)
|+ +. +.+.|.+||+. ++....... ++... ..+| ..+..+.++++|++| ++||++
T Consensus 81 vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g-----~~~~~~nDvavD~~G-naYVt~ 154 (334)
T 2p9w_A 81 AVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAG-----KRPFGVVQSAQDRDG-NSYVAF 154 (334)
T ss_dssp EEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHS-----SCCEEEEEEEECTTS-CEEEEE
T ss_pred EEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccccccc-----ccccCCceeEECCCC-CEEEeC
Confidence 84 42 46889999988 555443332 11000 0000 123458899999998 999999
Q ss_pred CCC-CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeCCCCEEEEEeCCCCe
Q 001380 792 SES-SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADSYNHKIKKLDPASNR 869 (1089)
Q Consensus 792 ~~~-~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~~n~~I~~~d~~~~~ 869 (1089)
+.. +.|.++++++..+....-.. . .......+.||++.|+|+ |+|+++ .++|.+||.....
T Consensus 155 s~~~~~I~rV~pdG~~~~~~~~~~----------~------~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv 217 (334)
T 2p9w_A 155 ALGMPAIARVSADGKTVSTFAWES----------G------NGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPY 217 (334)
T ss_dssp EESSCEEEEECTTSCCEEEEEECC----------C------CSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSS
T ss_pred CCCCCeEEEEeCCCCEEeeeeecC----------C------CcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCc
Confidence 999 99999999876444332110 0 001235688999999995 777777 9999999987322
Q ss_pred EEEEecc--CCCCCCCCcccccccCCCceE-EEccCCcE-EEEECCCCEEEEEeCCC
Q 001380 870 VSTLAGI--GKAGFKDGAALAAQLSEPAGI-IEAQNGNL-FIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 870 v~t~~g~--g~~g~~~g~~~~~~l~~P~gi-~vd~~G~l-yVad~~n~~I~~~~~~~ 922 (1089)
...+.-. |.. ..+..|.+| .+..+|++ +|++..++++...+.++
T Consensus 218 ~~~v~~~~~G~~---------~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 218 AWPEPVKINGDF---------GTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCCEECEESSCC---------CCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ceeecccccCCc---------ccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 1012111 111 256779996 66668875 99998888877777766
No 363
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.32 E-value=1.3e-12 Score=124.80 Aligned_cols=91 Identities=13% Similarity=0.085 Sum_probs=80.7
Q ss_pred CCCEEEEEEecCC--CcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 452 KGKVVVLDFWTYC--CINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 452 ~gk~vll~Fwa~w--C~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
.+++|||+|||.| |++|+.+.|.|.++.++|.++.+.++-|.+ |.+.+++.
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdv---------------------------De~~~lA~ 85 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADL---------------------------EQSEAIGD 85 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCH---------------------------HHHHHHHH
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEEC---------------------------CCCHHHHH
Confidence 5678999999999 999999999999999999764377777743 56779999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|||+++||++++ ++|+++.+..|....+++.++|+..++
T Consensus 86 ~ygV~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 86 RFGAFRFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp HHTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HcCCccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 9999999999999 999999999999999999999988774
No 364
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=99.32 E-value=1.7e-12 Score=145.76 Aligned_cols=95 Identities=15% Similarity=0.200 Sum_probs=84.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHH-----CCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRIKVDANLAA-----AGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPT 239 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~-----~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p 239 (1089)
.++||+.++|+.|+++|++++|+||+..+.++..+++ +++. .+++.+. ..||+++.|.++++++|+.+
T Consensus 256 ~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~-~~~~v~~------~~KPKp~~l~~al~~Lgl~p 328 (387)
T 3nvb_A 256 KAFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLD-DIAVFVA------NWENKADNIRTIQRTLNIGF 328 (387)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGG-GCSEEEE------ESSCHHHHHHHHHHHHTCCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCcc-CccEEEe------CCCCcHHHHHHHHHHhCcCc
Confidence 4689999999999999999999999999999999998 5664 6665432 57999999999999999999
Q ss_pred CcEEEEcCChhhHHHHHHc--CCeEEEEc
Q 001380 240 SECIVIEDALAGVQAAKAA--QMRCIAVT 266 (1089)
Q Consensus 240 ~~~v~VGD~~~Di~aA~~a--G~~~i~V~ 266 (1089)
++|+||||+..|+.+++++ |+.++.+.
T Consensus 329 ee~v~VGDs~~Di~aaraalpgV~vi~~p 357 (387)
T 3nvb_A 329 DSMVFLDDNPFERNMVREHVPGVTVPELP 357 (387)
T ss_dssp GGEEEECSCHHHHHHHHHHSTTCBCCCCC
T ss_pred ccEEEECCCHHHHHHHHhcCCCeEEEEcC
Confidence 9999999999999999999 88776663
No 365
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=5.1e-10 Score=128.38 Aligned_cols=234 Identities=10% Similarity=0.038 Sum_probs=137.0
Q ss_pred CCceEEEeecCCeEEEEeC---------CCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEE
Q 001380 602 FPGKLAIDILNNRLFISDS---------NHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~---------~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~l 671 (1089)
.| +++++|++..|||++. ..+.|.++|.. ++.+.++..++...+. .-..|.+++++|+|++|
T Consensus 68 ~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~-------~g~~p~~~~~spDG~~l 139 (373)
T 2mad_H 68 LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD-------VGPYSWMNANTPNNADL 139 (373)
T ss_pred CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccc-------cCCCccceEECCCCCEE
Confidence 47 9999998889999985 25679999986 6666666443111000 01479999999999999
Q ss_pred EEEECC-CCEEEEEECCCCeEEEE-ecCCCCCC--CC---------CCCC------ccccc---------ccCCc--eeE
Q 001380 672 YVADTE-NHALREIDFVNDTVRTL-AGNGTKGS--DY---------QGGE------KGTSQ---------LLNSP--WDV 721 (1089)
Q Consensus 672 yVaD~~-n~~I~~~d~~~g~v~~~-ag~g~~~~--~~---------~~~~------~~~~~---------~l~~P--~~l 721 (1089)
||+... .+.|..|| +++++... ...+.... .. .++. .+... .-..| ...
T Consensus 140 ~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~ 218 (373)
T 2mad_H 140 LFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQP 218 (373)
T ss_pred EEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecc
Confidence 999865 68999999 88776543 32221000 00 0000 00000 00000 011
Q ss_pred EEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCce---EEEcCCCCEEEEEeC------
Q 001380 722 CYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG---ISLSPDFMEIYVADS------ 792 (1089)
Q Consensus 722 a~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~g---lav~~~g~~lyvad~------ 792 (1089)
.+.++++.+|+.. ..++++.+|..++....... .. . ...........|.| +++++++++|||+..
T Consensus 219 ~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~--~~--~-~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~ 292 (373)
T 2mad_H 219 AQANKSGRIVWPV-YSGKILQADISAAGATNKAP--ID--A-LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWK 292 (373)
T ss_pred eeEecCCEEEEEc-CCceEEEEeccCCcceEeee--ee--e-cCCcccccceecCceEeEEECCCCCEEEEEeccCCccc
Confidence 2223333333333 23455555554432221110 00 0 00000011123555 899999999999864
Q ss_pred ---CCCeEEEEEcCCCCe-EEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc--EEEEeCCCCEEEEEeCC
Q 001380 793 ---ESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ--IYVADSYNHKIKKLDPA 866 (1089)
Q Consensus 793 ---~~~~I~~~~~~~~~~-~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~--lyVaD~~n~~I~~~d~~ 866 (1089)
.++.|.++|..++.+ ..+..+ ..|.++++++||+ +|+++...+.|.+||.+
T Consensus 293 ~~~~~~~V~VID~~t~~vv~~i~~g-----------------------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 293 LHAAAKEVTSVTGLVGQTSSQISLG-----------------------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred ccCCCCeEEEEECCCCEEEEEEECC-----------------------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 246899999987765 333221 1599999999996 77888788999999998
Q ss_pred CCeEEEE
Q 001380 867 SNRVSTL 873 (1089)
Q Consensus 867 ~~~v~t~ 873 (1089)
++++...
T Consensus 350 t~~vv~~ 356 (373)
T 2mad_H 350 AGDQDQS 356 (373)
T ss_pred CCCEEee
Confidence 8776544
No 366
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.32 E-value=1.2e-12 Score=126.04 Aligned_cols=100 Identities=18% Similarity=0.387 Sum_probs=81.2
Q ss_pred eecccccCCCEEEEEEecCCCcchhhhhhhH---HHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceee
Q 001380 445 LQFRRDLKGKVVVLDFWTYCCINCMHVLPDL---EFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVN 521 (1089)
Q Consensus 445 ~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 521 (1089)
+.+ ++.+||++||+||++||++|+.+.|.+ .++.+.++. ++.++.|.++ .
T Consensus 20 ~~~-~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~-----~-------------------- 72 (130)
T 2kuc_A 20 LKR-AEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDME-----K-------------------- 72 (130)
T ss_dssp HHH-HHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSS-----S--------------------
T ss_pred HHH-HHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecC-----C--------------------
Confidence 444 446799999999999999999999998 666655543 4777778541 1
Q ss_pred cCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 522 DGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 522 d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+....+++.|+|.++|+++++|++|+++.++.|....+.+.++|+..+..
T Consensus 73 ~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 73 GEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp TTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred cchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 34568999999999999999999999999999998888898888877653
No 367
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.31 E-value=4.7e-10 Score=128.31 Aligned_cols=256 Identities=14% Similarity=0.101 Sum_probs=150.5
Q ss_pred CCeEEEEeCC-----CCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC---------
Q 001380 612 NNRLFISDSN-----HNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT--------- 676 (1089)
Q Consensus 612 ~g~L~vsd~~-----~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~--------- 676 (1089)
..++||+|.+ .+.|.++|.+ |+.+.++..+ ..| +++++|+|+++|+++.
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g---------------~~p-~i~~spdg~~lyv~~~~~~~~~~g~ 78 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA---------------FNG-HVQVSNDGKKIYTMTTYHERITRGK 78 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC---------------EEE-EEEECTTSSEEEEEEEEETTSSSSC
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC---------------CCC-ceEECCCCCEEEEEEecccccccCC
Confidence 4689999965 4589999975 7777666543 157 9999999999999974
Q ss_pred CCCEEEEEECCCCe-EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC-CcEEEEEECCCCeEEEE-
Q 001380 677 ENHALREIDFVNDT-VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG-QHQIWEHSTVDGVTRAF- 753 (1089)
Q Consensus 677 ~n~~I~~~d~~~g~-v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~-~~~I~~~~~~~g~~~~~- 753 (1089)
..+.|..||..+++ +.++...... ...-..|.+++++|+|++||+++.+ .+.|..||..++.+..-
T Consensus 79 ~~~~v~v~d~~t~~~~~~i~~~~~~-----------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~ 147 (361)
T 2oiz_A 79 RSDVVEVWDADKLTFEKEISLPPKR-----------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDV 147 (361)
T ss_dssp EEEEEEEEETTTCCEEEEEEECTTB-----------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECcCCcEEEEEEcCccc-----------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEE
Confidence 24579999998754 4444321110 0012479999999999999999986 78999999998866443
Q ss_pred eCCCccccCCCCCCCCccccCCc----eEEEcCCCCEEEEEeCCCCeEE-EE------EcCCC----------CeEEEec
Q 001380 754 SGDGYERNLNGSSSLNTSFAQPS----GISLSPDFMEIYVADSESSSIR-AL------NLKTG----------GSRLLAG 812 (1089)
Q Consensus 754 ~g~g~~~~~~g~~~~~~~~~~P~----glav~~~g~~lyvad~~~~~I~-~~------~~~~~----------~~~~~~g 812 (1089)
...+... .....|. -++++++|..+|+....++++. .. +...+ ....+..
T Consensus 148 i~~~~~~---------~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 218 (361)
T 2oiz_A 148 TAAAGCW---------SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS 218 (361)
T ss_dssp GGGTTEE---------EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB
T ss_pred ecCCCcc---------eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe
Confidence 2111000 0001222 2555666655555443333332 11 00000 0000000
Q ss_pred CCCCCCCCccccCCCCCcc-----------ccccccCceE---EEEccCC-cEEEEeC----------CCCEEEEEeCCC
Q 001380 813 GDPIFPDNLFKFGDRDGMG-----------SEVLLQHPLG---VYCAKNG-QIYVADS----------YNHKIKKLDPAS 867 (1089)
Q Consensus 813 ~~~~~~~~l~~~g~~dg~~-----------~~~~l~~P~g---va~~~~G-~lyVaD~----------~n~~I~~~d~~~ 867 (1089)
.+. .-..+++.. +... ....-..|.| ++++++| .+||+.. ..+.|.++|.++
T Consensus 219 ~~~--~v~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t 295 (361)
T 2oiz_A 219 YYG--NVYSADFSG-DEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT 295 (361)
T ss_dssp TTS--EEEEEECSS-SSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT
T ss_pred CCC--eEEEEEecC-CCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC
Confidence 000 000000000 0000 0000012444 8899885 7999865 245899999988
Q ss_pred CeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECCCCEEEEEeCCCC
Q 001380 868 NRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 868 ~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~~~~~~~~ 923 (1089)
+++..-... . . |.+|+++++|+ ||+++. +.|.+++..+.
T Consensus 296 ~~~v~~i~~-------------~-~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 296 KQRVARIPG-------------R-D-ALSMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp TEEEEEEEC-------------T-T-CCEEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred CcEEEEEec-------------C-C-eeEEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 765433211 1 2 99999999986 888874 99999998775
No 368
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.31 E-value=3.6e-12 Score=124.43 Aligned_cols=101 Identities=20% Similarity=0.377 Sum_probs=83.3
Q ss_pred CCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCC--CEEEEEEeCCCCCChhcHHHHHHHHHHcCCcc
Q 001380 440 LNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM--PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISH 517 (1089)
Q Consensus 440 ~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~--~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (1089)
+++..+.. ...++|++||+||++||++|+.+.|.|.++++++++. ++.++.|.+
T Consensus 22 l~~~~~~~-~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----------------------- 77 (140)
T 2dj1_A 22 LNDGNFDN-FVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDA----------------------- 77 (140)
T ss_dssp CCTTTHHH-HHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECT-----------------------
T ss_pred cChHhHHH-HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeC-----------------------
Confidence 34444433 2336899999999999999999999999999999764 488888843
Q ss_pred ceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 518 PVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 518 ~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+.+.++++.|+|.++|+++++ ++|+ +.++.|..+.+.+.++|++++.
T Consensus 78 ----~~~~~~~~~~~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~ 124 (140)
T 2dj1_A 78 ----TSASMLASKFDVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQ 124 (140)
T ss_dssp ----TTCHHHHHHTTCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHS
T ss_pred ----cccHHHHHHCCCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcC
Confidence 345689999999999999999 8899 6788899999999999988774
No 369
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.31 E-value=5.3e-12 Score=117.03 Aligned_cols=87 Identities=18% Similarity=0.315 Sum_probs=74.0
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.+++++++ ++.++.|++ |.+.++++.|
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~---------------------------~~~~~~~~~~ 70 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDV---------------------------HQCQGTAATN 70 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEET---------------------------TTSHHHHHHT
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEEC---------------------------ccCHHHHHhc
Confidence 68999999999999999999999999999994 588888864 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|... +++.++|++.+
T Consensus 71 ~v~~~Pt~~~~-~~G~~~~~~~G~~~-~~l~~~l~~~l 106 (107)
T 1gh2_A 71 NISATPTFQFF-RNKVRIDQYQGADA-VGLEEKIKQHL 106 (107)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESSCH-HHHHHHHHHHH
T ss_pred CCCcccEEEEE-ECCeEEEEEeCCCH-HHHHHHHHHhc
Confidence 99999999999 89999999998654 44777776654
No 370
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.31 E-value=5e-12 Score=120.25 Aligned_cols=87 Identities=24% Similarity=0.373 Sum_probs=77.1
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|+++.++|++ +.++.|++ |.+.++++.|
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~---------------------------~~~~~~~~~~ 83 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDV---------------------------DELKPIAEQF 83 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEET---------------------------TTCHHHHHHT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEEC---------------------------CCCHHHHHHc
Confidence 589999999999999999999999999999875 88888865 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|.. .+.+.++|++++
T Consensus 84 ~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 84 SVEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred CCCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 99999998877 8999999999988 888888888765
No 371
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.31 E-value=5.7e-12 Score=123.18 Aligned_cols=93 Identities=22% Similarity=0.240 Sum_probs=83.3
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|.+++++++++ +.++.|.+ |.+.++++.|
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~---------------------------~~~~~l~~~~ 74 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINI---------------------------ATNPWTAEKY 74 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEET---------------------------TTCHHHHHHH
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEEC---------------------------CcCHhHHHHC
Confidence 4799999999999999999999999999999874 88888854 4566899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+++++...
T Consensus 75 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 115 (140)
T 3hz4_A 75 GVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQHGE 115 (140)
T ss_dssp TCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhcccc
Confidence 99999999888 899999999999999999999999887644
No 372
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.30 E-value=6e-12 Score=118.26 Aligned_cols=84 Identities=25% Similarity=0.486 Sum_probs=73.5
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
+||++||+||++||++|+.+.|.|+++++++++ +.++.|++ |.+.+++++|
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~---------------------------~~~~~l~~~~ 79 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDV---------------------------DESPDIAKEC 79 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEEC---------------------------CCCHHHHHHC
Confidence 589999999999999999999999999999875 88888854 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
+|.++|+++++ ++|+++.++.|.. .+.+.++|+
T Consensus 80 ~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~ 112 (114)
T 2oe3_A 80 EVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIK 112 (114)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHH
T ss_pred CCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHH
Confidence 99999998887 8999999999987 777777664
No 373
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.30 E-value=6.4e-12 Score=120.15 Aligned_cols=88 Identities=18% Similarity=0.305 Sum_probs=77.1
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.+++++++ ++.++.|++ |.+.++++.|
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~---------------------------d~~~~l~~~~ 86 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDA---------------------------DNNSEIVSKC 86 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEET---------------------------TTCHHHHHHT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEEC---------------------------CCCHHHHHHc
Confidence 68999999999999999999999999999985 488888865 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|.++|+++++ ++|+++.++.| .+.+.+.++|+++++
T Consensus 87 ~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 87 RVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred CCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99999998877 89999999999 577888888887764
No 374
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.30 E-value=2.1e-10 Score=131.16 Aligned_cols=239 Identities=10% Similarity=0.105 Sum_probs=144.6
Q ss_pred CCCceEEEeecCCeEEEEeC---------CCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCE
Q 001380 601 KFPGKLAIDILNNRLFISDS---------NHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~---------~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~ 670 (1089)
..| ++++++++.+||+++. ..+.|.++|.. ++.+.++...... +. .-..|.+++++|+|++
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~-~~-------~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR-VQ-------GLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB-CC-------BCCCGGGEEECTTSSE
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc-cc-------cCCCcceEEECCCCCE
Confidence 357 8999998889999984 24579999986 6777666543110 00 1147999999999999
Q ss_pred EEEEECC-CCEEEEEECCCCeEEEE-ecCCCCCCCCCCCCcccccccCCc----eeEEEecCCCEEEEEECCC-------
Q 001380 671 LYVADTE-NHALREIDFVNDTVRTL-AGNGTKGSDYQGGEKGTSQLLNSP----WDVCYKPINEKVYIAMAGQ------- 737 (1089)
Q Consensus 671 lyVaD~~-n~~I~~~d~~~g~v~~~-ag~g~~~~~~~~~~~~~~~~l~~P----~~la~~~~g~~lyvad~~~------- 737 (1089)
|||++.. .+.|.+||.+++.+... ...+... ..+..| .-++++++|..+|+.....
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~-----------~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~ 190 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAAAGCW-----------SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQS 190 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGGTTEE-----------EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecCCCcc-----------eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeec
Confidence 9999875 68999999998766543 3222100 000011 2244444444444443222
Q ss_pred ------------------------------cEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCce---EEEcCCC
Q 001380 738 ------------------------------HQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG---ISLSPDF 784 (1089)
Q Consensus 738 ------------------------------~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~g---lav~~~g 784 (1089)
+.|+.+|...+.+..+..-. ... ......-..|.| +++++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~----~~~-~~~~~~~~~p~g~~~~a~~~dg 265 (361)
T 2oiz_A 191 RSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWS----LLN-DEDKAKNWVPGGYNLVGLHRAS 265 (361)
T ss_dssp ECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEE----SCC-HHHHHTTCEECCSSCEEEETTT
T ss_pred cccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceeccccc----ccC-ccccccccccCCeeEEEEecCC
Confidence 22333333222111110000 000 000000012444 9999999
Q ss_pred CEEEEEeC----------CCCeEEEEEcCCCCeE-EEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEE
Q 001380 785 MEIYVADS----------ESSSIRALNLKTGGSR-LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYV 852 (1089)
Q Consensus 785 ~~lyvad~----------~~~~I~~~~~~~~~~~-~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyV 852 (1089)
+++||+.. .+++|..+|..++.+. .+..+ . |.+|+++++|+ +|+
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~-----------------------~-p~~ia~spdg~~l~v 321 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR-----------------------D-ALSMTIDQQRNLMLT 321 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT-----------------------T-CCEEEEETTTTEEEE
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC-----------------------C-eeEEEECCCCCEEEE
Confidence 99999965 2458999999876543 22110 2 99999999995 888
Q ss_pred EeCCCCEEEEEeCCCC--eEE-EEeccCCCCCCCCcccccccCCCceEEEccCCc
Q 001380 853 ADSYNHKIKKLDPASN--RVS-TLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN 904 (1089)
Q Consensus 853 aD~~n~~I~~~d~~~~--~v~-t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~ 904 (1089)
++. +.|.++|.+++ ++. ++...| ..|.+++++++|+
T Consensus 322 ~n~--~~v~v~D~~t~~l~~~~~i~~~G--------------~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 322 LDG--GNVNVYDISQPEPKLLRTIEGAA--------------EASLQVQFHPVGG 360 (361)
T ss_dssp ECS--SCEEEEECSSSSCEEEEEETTSC--------------SSEEEEEECCCSC
T ss_pred eCC--CeEEEEECCCCcceeeEEeccCC--------------CCcEEEEecCCCC
Confidence 874 89999999988 543 332333 3499999999884
No 375
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.30 E-value=1.1e-09 Score=115.54 Aligned_cols=207 Identities=13% Similarity=0.090 Sum_probs=141.9
Q ss_pred CCCceEEEeecCCeEEEEeCC--CCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 601 KFPGKLAIDILNNRLFISDSN--HNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~--~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
.|-.|++++ +++||++... .++|.++|+. |+++..+..+.. ....|+++ .++.||++++.
T Consensus 21 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-------------~fgeGi~~--~~~~ly~ltw~ 83 (243)
T 3mbr_X 21 AFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-------------YFGAGIVA--WRDRLIQLTWR 83 (243)
T ss_dssp CCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-------------CCEEEEEE--ETTEEEEEESS
T ss_pred cccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-------------cceeEEEE--eCCEEEEEEee
Confidence 566799998 4899999665 4699999996 888887765421 12355666 46789999999
Q ss_pred CCEEEEEECCCCeEE-EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCC
Q 001380 678 NHALREIDFVNDTVR-TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD 756 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~-~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~ 756 (1089)
++.+.++|.++..+. ++.- + ..+|+++.+ ++.||+++ ++++|+.+|+.+..+..-...
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~-~-----------------~~Gwglt~d--g~~L~vSd-gs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRY-P-----------------GEGWALTSD--DSHLYMSD-GTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp SSEEEEEETTTTEEEEEEEC-S-----------------SCCCEEEEC--SSCEEEEC-SSSEEEEECTTTCCEEEEEEC
T ss_pred CCEEEEEECCcCcEEEEEeC-C-----------------CCceEEeeC--CCEEEEEC-CCCeEEEEeCCCCeEEEEEEE
Confidence 999999999886644 4442 2 146888754 67999999 589999999998765433221
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l 836 (1089)
+. + ...+..++.|... +| +||+....++.|.++|+.+|.+.-...-.. +..-... ......
T Consensus 143 ~~----~-----g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~V~~~idl~~-----l~~~~~~---~~~~~~ 203 (243)
T 3mbr_X 143 TA----G-----GRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGKVVAWIDLQA-----LVPDADA---LTDSTN 203 (243)
T ss_dssp EE----T-----TEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCBEEEEEECGG-----GSTTTTS---CCCTTS
T ss_pred cc----C-----CcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCCEEEEEECCc-----Ccccccc---ccCCcC
Confidence 11 0 1223456667765 45 999999999999999999998764332110 1100000 001124
Q ss_pred cCceEEEEccCC-cEEEEeCCCCEEEEEe
Q 001380 837 QHPLGVYCAKNG-QIYVADSYNHKIKKLD 864 (1089)
Q Consensus 837 ~~P~gva~~~~G-~lyVaD~~n~~I~~~d 864 (1089)
..|.|||+|+++ ++||+.-.=-+++.+.
T Consensus 204 ~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 204 DVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp SCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 579999999865 7999987666776654
No 376
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.29 E-value=4.9e-10 Score=118.95 Aligned_cols=205 Identities=14% Similarity=0.105 Sum_probs=141.9
Q ss_pred CCCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCC
Q 001380 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~ 679 (1089)
.|-.|+.++ +++||++....++|.++|+. |+++..+ .... ....|++++ |+.||++++.++
T Consensus 55 ~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-------------~FgeGit~~--g~~Ly~ltw~~~ 116 (268)
T 3nok_A 55 AFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-------------IFAEGLASD--GERLYQLTWTEG 116 (268)
T ss_dssp CCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-------------CCEEEEEEC--SSCEEEEESSSC
T ss_pred cccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-------------cceeEEEEe--CCEEEEEEccCC
Confidence 345688887 68999999999999999986 8877776 3311 123566664 666999999999
Q ss_pred EEEEEECCCCeEE-EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCc
Q 001380 680 ALREIDFVNDTVR-TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758 (1089)
Q Consensus 680 ~I~~~d~~~g~v~-~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~ 758 (1089)
.+.++|.++.++. ++. .+ ..+|+++.+ ++.||+++ ++++|+.+|+++..+..-...+.
T Consensus 117 ~v~V~D~~Tl~~~~ti~-~~-----------------~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTR-YS-----------------GEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp EEEEEETTTTEEEEEEE-CS-----------------SCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEE
T ss_pred EEEEEECCcCcEEEEEe-CC-----------------CceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC
Confidence 9999999886654 443 21 146888865 67999999 69999999999876543321111
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccC
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~ 838 (1089)
+ ...+..++.|.+. +| .||+....++.|.+||+.++.+.....-. ++...... ........
T Consensus 176 ----~-----g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~V~~~Idl~-----~L~~~~~~---~~~~~~~v 236 (268)
T 3nok_A 176 ----R-----GQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGTVVGVIDAS-----ALTRAVAG---QVTNPEAV 236 (268)
T ss_dssp ----T-----TEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCBEEEEEECH-----HHHHHHTT---TCCCTTCC
T ss_pred ----C-----CcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCcEEEEEECC-----CCcccccc---cccCcCCc
Confidence 0 1234466788877 66 99999999999999999998875433210 01000000 00112347
Q ss_pred ceEEEEccCC-cEEEEeCCCCEEEEE
Q 001380 839 PLGVYCAKNG-QIYVADSYNHKIKKL 863 (1089)
Q Consensus 839 P~gva~~~~G-~lyVaD~~n~~I~~~ 863 (1089)
|.|||+++++ ++||+.-.=-+++.+
T Consensus 237 lNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 237 LNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp EEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred eEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 9999999865 799998665566655
No 377
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.29 E-value=5.3e-12 Score=116.29 Aligned_cols=88 Identities=24% Similarity=0.418 Sum_probs=77.6
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||.||++||++|+.+.|.++++++++++. +.++.|+. |.+.++++.|
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~---------------------------~~~~~~~~~~ 68 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNT---------------------------DEAPGIATQY 68 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcC---------------------------cchHHHHHhC
Confidence 5789999999999999999999999999999864 88888864 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+++
T Consensus 69 ~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 69 NIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred CCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhh
Confidence 99999998888 7999999999998888888888764
No 378
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.28 E-value=6e-12 Score=120.06 Aligned_cols=89 Identities=26% Similarity=0.459 Sum_probs=74.1
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.++|++||+||++||++|+.+.|.+++++++++ ++.++.|+++ +.+.++++
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~--------------------------~~~~~~~~ 85 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCN--------------------------QENKTLAK 85 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS--------------------------STTHHHHH
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecC--------------------------cchHHHHH
Confidence 3478999999999999999999999999999987 4788888541 23568999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
.|+|.++|+++++ ++|+++.++.|.. .+++.++|+++
T Consensus 86 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 86 ELGIRVVPTFKIL-KENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp HHCCSSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred HcCCCeeeEEEEE-eCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 9999999995555 8999999999875 77777777654
No 379
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.28 E-value=8.3e-10 Score=125.87 Aligned_cols=268 Identities=12% Similarity=0.065 Sum_probs=168.6
Q ss_pred cCCeEEEEeCCCCEEEEEeCCC-----CEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCC------C
Q 001380 611 LNNRLFISDSNHNRIVVTDLDG-----NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTEN------H 679 (1089)
Q Consensus 611 ~~g~L~vsd~~~~~I~~~~~~g-----~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n------~ 679 (1089)
...+|||+..+.++|.++|... +.+.+|... +- ..+.-...|+++.+.|+| |||+..++ +
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~-~~------~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g 164 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPE-EV------KKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPG 164 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHH-HH------HHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCC
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechh-hc------ccccCCCcccceeECCCe--EEEEcCCCcCCCCCC
Confidence 4788999999999999999752 345555210 00 000013479999999998 89987666 7
Q ss_pred EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC------------------CcEEE
Q 001380 680 ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG------------------QHQIW 741 (1089)
Q Consensus 680 ~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~------------------~~~I~ 741 (1089)
.|..+|.+++++..--..+... -..++++.++|+++.+|+++++ .++|.
T Consensus 165 ~v~vlD~~T~~v~~~~~~~~~~-------------~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~ 231 (462)
T 2ece_A 165 GILMLDHYSFEPLGKWEIDRGD-------------QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIH 231 (462)
T ss_dssp EEEEECTTTCCEEEECCSBCTT-------------CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEE
T ss_pred eEEEEECCCCeEEEEEccCCCC-------------ccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEE
Confidence 9999999876655443222110 1256789999999999999854 79999
Q ss_pred EEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEE--cCCCCEEEEEeC-----CCCeEEEEEcCCCCeEEEec--
Q 001380 742 EHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISL--SPDFMEIYVADS-----ESSSIRALNLKTGGSRLLAG-- 812 (1089)
Q Consensus 742 ~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav--~~~g~~lyvad~-----~~~~I~~~~~~~~~~~~~~g-- 812 (1089)
.||..++++..-...|. .-..|.+|.+ +|+|+.+||+.. .+++|.++..+++......-
T Consensus 232 v~D~~~~k~~~tI~vg~------------~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 232 FWDLRKRKRIHSLTLGE------------ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp EEETTTTEEEEEEESCT------------TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEeeEEecCC------------CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence 99998875443221110 1124788877 999999999999 89999887776543321110
Q ss_pred --CCCCCC---CCccccCCCCCccccccccCceEEEEccCC-cEEEEeCCCCEEEEEeCC-CC--eE-EEEeccCCCC--
Q 001380 813 --GDPIFP---DNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPA-SN--RV-STLAGIGKAG-- 880 (1089)
Q Consensus 813 --~~~~~~---~~l~~~g~~dg~~~~~~l~~P~gva~~~~G-~lyVaD~~n~~I~~~d~~-~~--~v-~t~~g~g~~g-- 880 (1089)
..+... .-.-.|+. .-..|.+|.+++|| .|||++.+.+.|.+||.. .+ ++ .++.-.|...
T Consensus 300 i~~~~v~~~lp~~~~~f~~--------~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~ 371 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKA--------VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRA 371 (462)
T ss_dssp ECCEECCSSCCGGGGGGTE--------ECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCB
T ss_pred CCCcccccccccccccccc--------CCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccc
Confidence 000000 00000110 01368999999999 599999999999999864 22 22 2222111100
Q ss_pred -CCCCcccccccCCCceEEEccCCc-EEEEE--------C-----CCCEEEEEeCCCC
Q 001380 881 -FKDGAALAAQLSEPAGIIEAQNGN-LFIAD--------T-----NNNIIRYLDLNKE 923 (1089)
Q Consensus 881 -~~~g~~~~~~l~~P~gi~vd~~G~-lyVad--------~-----~n~~I~~~~~~~~ 923 (1089)
...|. .--..|.+++++++|+ |||++ . ++..+.+++.+.+
T Consensus 372 ~~~~G~---~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~ 426 (462)
T 2ece_A 372 DHPAGH---KLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPS 426 (462)
T ss_dssp CCTTSC---CCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTT
T ss_pred cccccc---cCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCC
Confidence 00000 0113599999999995 99998 2 4556665555544
No 380
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.28 E-value=5.9e-12 Score=118.80 Aligned_cols=88 Identities=26% Similarity=0.471 Sum_probs=74.9
Q ss_pred cccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 449 ~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
++.++|++||+||++||++|+.+.|.++++++++ ++.++.|++ |.+.+++
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~---------------------------~~~~~~~ 78 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDV---------------------------DKLEETA 78 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEET---------------------------TTSHHHH
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEEC---------------------------CccHHHH
Confidence 3447899999999999999999999999999888 588888864 3456899
Q ss_pred HHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 529 RELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 529 ~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+.|+|.++|+++++ ++|+++.++.| .+.+.+.++|+++
T Consensus 79 ~~~~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 79 RKYNISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp HHTTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHcCCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHh
Confidence 99999999998877 89999999999 5777777777654
No 381
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.28 E-value=4.9e-12 Score=118.00 Aligned_cols=89 Identities=19% Similarity=0.310 Sum_probs=75.7
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
.++|++||+||++||++|+.+.|.|.++.++++ ++.++.|++ |.+.++++.
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~---------------------------~~~~~l~~~ 67 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDS---------------------------EARPELMKE 67 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEG---------------------------GGCHHHHHH
T ss_pred HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcC---------------------------cCCHHHHHH
Confidence 457999999999999999999999999998886 467777743 345679999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
|+|.++|+++++ ++|+++.++.|..+.+++.+.++...
T Consensus 68 ~~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 68 LGFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp TTCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC-
T ss_pred cCCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 999999999999 99999999999888888877776543
No 382
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.28 E-value=8.1e-12 Score=115.80 Aligned_cols=89 Identities=25% Similarity=0.454 Sum_probs=78.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||.||++||++|+.+.|.|.++.+++++ ++.++.|++ |.+.++++.|
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~---------------------------~~~~~~~~~~ 68 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDV---------------------------DENPKTAMRY 68 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEEC---------------------------CCCHhHHHhC
Confidence 579999999999999999999999999999986 489999965 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+.++
T Consensus 69 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 69 RVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred CCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 99999999999 89999999999988888888887654
No 383
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.28 E-value=1.3e-11 Score=115.00 Aligned_cols=89 Identities=20% Similarity=0.366 Sum_probs=77.9
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCC--CEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM--PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~--~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
+++|++||+||++||++|+.+.|.+.++.+++.+. ++.++.|.+ +.+.+++
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~---------------------------~~~~~l~ 71 (111)
T 3uvt_A 19 IAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDC---------------------------TAERNIC 71 (111)
T ss_dssp HHSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEET---------------------------TTCHHHH
T ss_pred hcCCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEec---------------------------cccHhHH
Confidence 34889999999999999999999999999988643 688888864 4556799
Q ss_pred HHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHH
Q 001380 529 RELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 529 ~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~ 567 (1089)
+.|+|.++|+++++ ++|+++.++.|..+.+.+.++|++
T Consensus 72 ~~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 72 SKYSVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp HHTTCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHH
T ss_pred HhcCCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHh
Confidence 99999999999888 899999999999999988888765
No 384
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.28 E-value=5.5e-12 Score=121.96 Aligned_cols=104 Identities=16% Similarity=0.266 Sum_probs=79.7
Q ss_pred CCCCceeeccccc-CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC-CCEEEEEEeCCCCCChhcHHHHHHHHHHcCCc
Q 001380 439 WLNTAPLQFRRDL-KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD-MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIS 516 (1089)
Q Consensus 439 ~~~g~~~~l~~~~-~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1089)
.+++..+.. ... ++|++||+||++||++|+.+.|.|.++++++++ .++.++.|.+
T Consensus 11 ~l~~~~~~~-~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~---------------------- 67 (133)
T 2dj3_A 11 VVVGKTFDA-IVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDA---------------------- 67 (133)
T ss_dssp ECCTTTCCC-CCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECT----------------------
T ss_pred EEcCCCHHH-HhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecC----------------------
Confidence 345554443 222 489999999999999999999999999999985 3688988854
Q ss_pred cceeecCChhHHHHhCCCceeEEEEECCCCcEEE-Eec-CCCchhhHHHHHHHHHH
Q 001380 517 HPVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLA-QLA-GEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 517 ~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~-~~~-G~~~~~~l~~~l~~~l~ 570 (1089)
+.+..+++.|+|.++|++++++.++++.. .+. |..+.+.+.++|+..+.
T Consensus 68 -----~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 68 -----TANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp -----TTSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred -----CcCHHHHhhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 22345667899999999999987776532 455 55788888888887664
No 385
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.28 E-value=1.3e-11 Score=115.49 Aligned_cols=89 Identities=28% Similarity=0.422 Sum_probs=78.3
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
.++|++||+||++||++|+.+.|.|+++.++++ ++.++.|++ |.+.++++.
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~---------------------------~~~~~~~~~ 74 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDV---------------------------DELKAVAEE 74 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEET---------------------------TTCHHHHHH
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEc---------------------------cccHHHHHh
Confidence 368999999999999999999999999999987 589999964 445688999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
|+|.++|+++++ ++|+++.++.| .+.+.+.++|++++.
T Consensus 75 ~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 75 WNVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp HHCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred CCCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 999999999998 79999999988 578889888887764
No 386
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.28 E-value=6.2e-11 Score=134.80 Aligned_cols=244 Identities=10% Similarity=0.005 Sum_probs=151.8
Q ss_pred CCceEEEeecCCeEEEEeC---------CCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEE
Q 001380 602 FPGKLAIDILNNRLFISDS---------NHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLL 671 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~---------~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~l 671 (1089)
.| +++++++++++||+++ ..+.|.++|+. ++.+.+|..++...+. ....|++++++|+|+++
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~-------~g~~P~~ia~SpDGk~l 138 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS-------VGPRVHIIGNCASSACL 138 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC-------BSCCTTSEEECTTSSCE
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc-------cCCCcceEEEcCCCCEE
Confidence 48 8999998899999984 35789999987 7788777544211111 12479999999999999
Q ss_pred EEEECC-CCEEEE--EECCCCeEEEEecCCCC-----C---C--CCCCCC-------c-----cccc--------ccCCc
Q 001380 672 YVADTE-NHALRE--IDFVNDTVRTLAGNGTK-----G---S--DYQGGE-------K-----GTSQ--------LLNSP 718 (1089)
Q Consensus 672 yVaD~~-n~~I~~--~d~~~g~v~~~ag~g~~-----~---~--~~~~~~-------~-----~~~~--------~l~~P 718 (1089)
||++.. .+.|.+ +|+.+ +.++.-.+.. + + ...++. . +... .-..|
T Consensus 139 yVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 139 LFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp EEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred EEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 999875 678888 88866 5555321100 0 0 000000 0 0000 00124
Q ss_pred eeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCce---EEEcCCCCEEEEEeC---
Q 001380 719 WDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSG---ISLSPDFMEIYVADS--- 792 (1089)
Q Consensus 719 ~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~g---lav~~~g~~lyvad~--- 792 (1089)
. + .++++.+|++.. +.|+.+|..++.......-. .........-..|.| ++++++|+++||+..
T Consensus 217 ~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~-----~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~ 286 (368)
T 1mda_H 217 A--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAID-----GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHS 286 (368)
T ss_dssp E--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCC-----SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECS
T ss_pred c--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEE-----eccccccccccccCcceeeEEcCCCCEEEEEecccc
Confidence 3 3 555556666655 77878887654332222100 000000001123555 899999999999865
Q ss_pred C-----CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeC-CCCEEEEEeC
Q 001380 793 E-----SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADS-YNHKIKKLDP 865 (1089)
Q Consensus 793 ~-----~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~-~n~~I~~~d~ 865 (1089)
+ .+.+.++|..+..+.... ..| ..|.||++++||+ +|++.. ..+.|.+||.
T Consensus 287 ~~~~~~~~~~~ViD~~t~~vv~~i-----------~vg-----------~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 287 RSCLAAAENTSSVTASVGQTSGPI-----------SNG-----------HDSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp SCTTSCEEEEEEEESSSCCEEECC-----------EEE-----------EEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred CcccccCCCEEEEECCCCeEEEEE-----------ECC-----------CCcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 3 345669999876553211 001 2599999999995 999998 6999999999
Q ss_pred CCCeEEEEeccCCCCCCCCcccccccCCCceEEEcc
Q 001380 866 ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ 901 (1089)
Q Consensus 866 ~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~ 901 (1089)
+++++..-...| ..|.||++..
T Consensus 345 ~t~kvv~~I~vg--------------~~P~~i~~~~ 366 (368)
T 1mda_H 345 ASDQDQSSVELD--------------KGPESLSVQN 366 (368)
T ss_dssp SSCEEEEECCCC--------------SCCCEEECCC
T ss_pred CCCcEEEEEECC--------------CCCCEEEeec
Confidence 988776544332 4499998864
No 387
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.27 E-value=3e-12 Score=121.77 Aligned_cols=89 Identities=25% Similarity=0.439 Sum_probs=77.8
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|+++++++++.++.++.|++ |.+.++++.|
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~---------------------------d~~~~~~~~~ 84 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDV---------------------------DEQSQIAQEV 84 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEET---------------------------TTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEEC---------------------------cCCHHHHHHc
Confidence 6799999999999999999999999999988765688898865 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|+++++ ++|+++.++.|. +.+.+.++|++++
T Consensus 85 ~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 85 GIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred CCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 99999999988 699999999998 8888888887654
No 388
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.27 E-value=1.3e-11 Score=113.88 Aligned_cols=89 Identities=33% Similarity=0.559 Sum_probs=75.8
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.++|++||.||++||++|+.+.|.++++.++++. ++.++.|++ |.+.++++
T Consensus 17 ~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~---------------------------~~~~~~~~ 68 (106)
T 1xwb_A 17 KASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDV---------------------------DECEDIAM 68 (106)
T ss_dssp HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEET---------------------------TTCHHHHH
T ss_pred hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEec---------------------------cchHHHHH
Confidence 34789999999999999999999999999999874 599999965 34567999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
.|+|.++|+++++ ++|+++.++.| .+.+.+.++|+++
T Consensus 69 ~~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 69 EYNISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred HcCCCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 9999999998777 79999999999 5777777777653
No 389
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.27 E-value=8.2e-12 Score=116.82 Aligned_cols=86 Identities=27% Similarity=0.456 Sum_probs=74.8
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.++.++++ ++.++.|++ |.+.++++.|
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~---------------------------~~~~~~~~~~ 75 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDV---------------------------DEVSEVTEKE 75 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEET---------------------------TTTHHHHHHT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEEC---------------------------CCCHHHHHHc
Confidence 68999999999999999999999999999987 488888864 3445799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+|.++|+++++ ++|+++.++.|. +.+.+.++|+++
T Consensus 76 ~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 76 NITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTT
T ss_pred CCCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHh
Confidence 99999997777 799999999998 888888887654
No 390
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.27 E-value=8.9e-10 Score=117.06 Aligned_cols=205 Identities=13% Similarity=0.105 Sum_probs=140.5
Q ss_pred CCCceEEEeecCCeEEEEeCC--CCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 601 KFPGKLAIDILNNRLFISDSN--HNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~--~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
.|-.|+.++ ++.||++... ..+|.++|+. |+++..+..... ....||++ .|+.||++++.
T Consensus 43 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-------------~FgeGit~--~g~~ly~ltw~ 105 (262)
T 3nol_A 43 AFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-------------YFGEGISD--WKDKIVGLTWK 105 (262)
T ss_dssp CEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-------------CCEEEEEE--ETTEEEEEESS
T ss_pred cccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-------------cceeEEEE--eCCEEEEEEee
Confidence 345789998 6899999855 4589999997 888887755411 12355666 47789999999
Q ss_pred CCEEEEEECCCCe-EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCC
Q 001380 678 NHALREIDFVNDT-VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGD 756 (1089)
Q Consensus 678 n~~I~~~d~~~g~-v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~ 756 (1089)
++.+.++|+++.. +.++.- + ..+|+++.+ ++.||+++ ++++|+.+|+.+..+..-...
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~-~-----------------~eG~glt~d--g~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNY-D-----------------GEGWGLTHN--DQYLIMSD-GTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp SSEEEEEETTTCCEEEEEEC-S-----------------SCCCCEEEC--SSCEEECC-SSSEEEEECTTTCSEEEEEEC
T ss_pred CCEEEEEECccCcEEEEEEC-C-----------------CCceEEecC--CCEEEEEC-CCCeEEEEcCCCCeEEEEEEe
Confidence 9999999998755 445542 1 145777754 67999998 589999999998655433211
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l 836 (1089)
+. + ...+..++.|.+. +| .||+....++.|.++|+.+|.+.....-. ++...... .....
T Consensus 165 ~~----~-----g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~-----~L~~~~~~----~~~~~ 224 (262)
T 3nol_A 165 TA----H-----GEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGKVTGIIDLN-----GILAEAGP----LPSPI 224 (262)
T ss_dssp EE----T-----TEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBEEEEEECT-----TGGGGSCS----CCSSC
T ss_pred cc----C-----CccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCcEEEEEECC-----cCcccccc----ccCcC
Confidence 10 0 0234456678776 56 99999999999999999999876443211 11110000 01124
Q ss_pred cCceEEEEccCC-cEEEEeCCCCEEEEE
Q 001380 837 QHPLGVYCAKNG-QIYVADSYNHKIKKL 863 (1089)
Q Consensus 837 ~~P~gva~~~~G-~lyVaD~~n~~I~~~ 863 (1089)
..|.|||+|+++ .+||+.-.=-+++.+
T Consensus 225 ~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp CCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 579999999875 799998665666655
No 391
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.27 E-value=1.4e-10 Score=130.34 Aligned_cols=205 Identities=13% Similarity=0.153 Sum_probs=137.9
Q ss_pred CcceeEEeeCCCEEEEEE------------CCCCEEEEEECC--CCeEEEEecCCCCCCCCCCCCcccccccCCceeEEE
Q 001380 658 RPQGLAYNAKKNLLYVAD------------TENHALREIDFV--NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY 723 (1089)
Q Consensus 658 ~P~gla~d~~g~~lyVaD------------~~n~~I~~~d~~--~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~ 723 (1089)
.|..|+++++|. +|++. ...++|.++|++ ++..+.+.-.|.+.. ..-..|+||.+
T Consensus 51 G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~----------~~~f~PhGi~~ 119 (355)
T 3sre_A 51 GSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLD----------ISSFNPHGIST 119 (355)
T ss_dssp CCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCC----------GGGCCEEEEEE
T ss_pred CcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCC----------cCceeeeeeEE
Confidence 467777777654 67774 246788888887 455666654332000 01238999999
Q ss_pred ecC--C-CEEEEEECCC--c--EEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeC----
Q 001380 724 KPI--N-EKVYIAMAGQ--H--QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS---- 792 (1089)
Q Consensus 724 ~~~--g-~~lyvad~~~--~--~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~---- 792 (1089)
.++ + .+|||++.+. + .|++++..++....+..- . ...+..|++++++++| .+|+++.
T Consensus 120 ~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~------~-----g~~~~~pND~~v~~~G-~fyvt~~~~ft 187 (355)
T 3sre_A 120 FIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI------R-----HKLLPSVNDIVAVGPE-HFYATNDHYFI 187 (355)
T ss_dssp EECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE------C-----CTTCSSEEEEEEEETT-EEEEEESCSCS
T ss_pred EECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc------c-----cCCCCCCceEEEeCCC-CEEecCCcEeC
Confidence 763 3 3799998773 3 477788776655444311 0 1347789999999998 9999875
Q ss_pred -------------CCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCC-cEEEEeCCCC
Q 001380 793 -------------ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADSYNH 858 (1089)
Q Consensus 793 -------------~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G-~lyVaD~~n~ 858 (1089)
..++|+++++. .++.+..+ +..|.||++++|| .+||+|+..+
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~----------------------l~~pNGia~spDg~~lYvadt~~~ 243 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEG----------------------FDFANGINISPDGKYVYIAELLAH 243 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEE----------------------ESSEEEEEECTTSSEEEEEEGGGT
T ss_pred CcccccchhhccCCccEEEEEECC--eEEEeecC----------------------CcccCcceECCCCCEEEEEeCCCC
Confidence 24678888763 44444332 6789999999998 6999999999
Q ss_pred EEEEEeCC-CCeEEEEeccCCCCCCCCcccccccCCCceEEEcc-CCcEEEEE-CCCCEEEEEeCC
Q 001380 859 KIKKLDPA-SNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ-NGNLFIAD-TNNNIIRYLDLN 921 (1089)
Q Consensus 859 ~I~~~d~~-~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~-~G~lyVad-~~n~~I~~~~~~ 921 (1089)
+|.+|+.+ ++.+....-.. .-..|.|+++|. +|+|||+. .+..+|.++++.
T Consensus 244 ~I~~~~~~~~g~l~~~~~~~------------~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 244 KIHVYEKHANWTLTPLRVLS------------FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEEEECTTSCEEEEEEEE------------CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred eEEEEEECCCCcEecCEEEe------------CCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 99999864 34443211000 013599999999 59999966 455677777665
No 392
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.26 E-value=1.2e-11 Score=118.62 Aligned_cols=89 Identities=12% Similarity=0.135 Sum_probs=75.5
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcC----CCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK----DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNL 527 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~----~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l 527 (1089)
.+|++||+|||+||++|+.+.|.+.++++++. ..++.++.|.+ |.+.++
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~---------------------------~~~~~l 84 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDG---------------------------EKYPDV 84 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEET---------------------------TTCHHH
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEc---------------------------cccHhH
Confidence 48999999999999999999999999998764 23588888864 456789
Q ss_pred HHHhCCCceeEEEEECCCCcEE-EEecCCCchhhHHHHHHH
Q 001380 528 WRELGVNSWPTFAVVGPNGKLL-AQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 528 ~~~~~v~~~Pt~~lid~~G~i~-~~~~G~~~~~~l~~~l~~ 567 (1089)
++.|+|.++|+++++++.+++. ..+.|..+.+.+.++|++
T Consensus 85 ~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~ 125 (127)
T 3h79_A 85 IERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp HHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHH
T ss_pred HHhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHh
Confidence 9999999999999997777653 568898899999888865
No 393
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.26 E-value=1.3e-11 Score=113.52 Aligned_cols=88 Identities=24% Similarity=0.494 Sum_probs=75.4
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.++|++||+||++||++|+.+.|.|.++.++++ ++.++.|++ |.+.++++
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~---------------------------~~~~~~~~ 66 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDV---------------------------DQNEEAAA 66 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEET---------------------------TTCHHHHH
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEec---------------------------cCCHHHHH
Confidence 3468999999999999999999999999999986 588888865 34567899
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
.|+|.++|+++++ ++|+++.++.| .+.+.+.++|+++
T Consensus 67 ~~~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 67 KYSVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HcCCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 9999999998888 59999999999 5777788777654
No 394
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.26 E-value=1e-11 Score=123.37 Aligned_cols=88 Identities=20% Similarity=0.365 Sum_probs=75.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.+++++++ ++.++.|.+ |.+.++++.|
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~---------------------------~~~~~l~~~~ 81 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEA---------------------------EGVPEVSEKY 81 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEET---------------------------TTSHHHHHHT
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEEC---------------------------CCCHHHHHHc
Confidence 58999999999999999999999999999984 588888865 3456899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|.++|++++++ +|+++.++.|. ..+.+.++|++++.
T Consensus 82 ~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~ 118 (153)
T 2wz9_A 82 EISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHAS 118 (153)
T ss_dssp TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhc
Confidence 999999999998 99999998885 56677777776654
No 395
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.26 E-value=4.2e-12 Score=120.72 Aligned_cols=93 Identities=17% Similarity=0.271 Sum_probs=78.2
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|.++++++++ ++.++.|++ +.+.++++.|
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~---------------------------~~~~~~~~~~ 71 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDC---------------------------QAYPQTCQKA 71 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeC---------------------------cCCHHHHHHc
Confidence 578999999999999999999999999999986 489999965 3455789999
Q ss_pred CCCceeEEEEECCCCcEEEEecCC----CchhhHHHHHHHHHHHhc
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGE----GHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~----~~~~~l~~~l~~~l~~~~ 573 (1089)
+|.++|++++++++|+ +.++.|. .+.+.+.++|+.+++...
T Consensus 72 ~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 116 (122)
T 3aps_A 72 GIKAYPSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLETLQ 116 (122)
T ss_dssp TCCSSSEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHHCC-
T ss_pred CCCccceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHHhhh
Confidence 9999999999987777 4455554 788999999999887544
No 396
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.26 E-value=3.4e-11 Score=120.96 Aligned_cols=102 Identities=14% Similarity=0.076 Sum_probs=79.8
Q ss_pred HHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 173 LINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 173 lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
.|+.|+++|++++|+||. ..++..++++.+. ++ ++.+ .++++..++.+++++|+++++++||||+.+|+
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lg---i~-~~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi 112 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLD---CK-TEVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDE 112 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCC---CC-EECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCC---cE-EEEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHhHH
Confidence 578899999999999998 6788889954443 22 2222 37889999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccC
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSV 289 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el 289 (1089)
.+++.+|+.++ + +...+.+++ .++++..+-.+-
T Consensus 113 ~~~~~ag~~~a-~--~na~~~~k~-~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 113 ECLKRVGLSAV-P--ADACSGAQK-AVGYICKCSGGR 145 (168)
T ss_dssp HHHHHSSEEEE-C--TTCCHHHHT-TCSEECSSCTTT
T ss_pred HHHHHCCCEEE-e--CChhHHHHH-hCCEEeCCCCCc
Confidence 99999997643 3 323344444 689998876554
No 397
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.26 E-value=2.3e-11 Score=118.84 Aligned_cols=101 Identities=25% Similarity=0.334 Sum_probs=78.9
Q ss_pred CCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccce
Q 001380 440 LNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPV 519 (1089)
Q Consensus 440 ~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v 519 (1089)
+++..+.. ...+++.+||+||++||++|+.+.|.|.+++++|++ ++.++.|++
T Consensus 38 l~~~~~~~-~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~------------------------- 90 (140)
T 1v98_A 38 ADEKGFAQ-EVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNV------------------------- 90 (140)
T ss_dssp ------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEET-------------------------
T ss_pred CCHHHHHH-HHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEEC-------------------------
Confidence 34444433 222344499999999999999999999999999986 499999965
Q ss_pred eecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 520 VNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 520 ~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
|.+.++++.|+|.++|+++++ ++|+++.++.|..+.+.+.++|+.+++
T Consensus 91 --~~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 91 --DEHPGLAARYGVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp --TTCHHHHHHTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred --CCCHHHHHHCCCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 345679999999999999999 899999999999889999999988764
No 398
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=7.1e-12 Score=119.99 Aligned_cols=89 Identities=19% Similarity=0.379 Sum_probs=76.3
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
+++ .+||+||++||++|+.+.|.|.++++++++.++.++.|.+ |.+.++++.
T Consensus 21 ~~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~---------------------------~~~~~~~~~ 72 (126)
T 1x5e_A 21 LEG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDV---------------------------TEQPGLSGR 72 (126)
T ss_dssp TSS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEET---------------------------TTCHHHHHH
T ss_pred hCC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEEC---------------------------cCCHHHHHH
Confidence 344 4899999999999999999999999999865689999965 345679999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
|+|.++|+++++ ++|++ .++.|..+.+.+.++|+..+
T Consensus 73 ~~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 73 FIINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp TTCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCG
T ss_pred cCCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHh
Confidence 999999999999 89995 68889888888888887654
No 399
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.25 E-value=1.6e-11 Score=115.85 Aligned_cols=89 Identities=24% Similarity=0.415 Sum_probs=77.1
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|+++.++|+ ++.++.|++ |.+.++++.|
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~---------------------------~~~~~~~~~~ 77 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDV---------------------------DELKDVAEAY 77 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEET---------------------------TTSHHHHHHT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEc---------------------------ccCHHHHHHc
Confidence 48999999999999999999999999999987 588888854 4456889999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+|.++|+++++ ++|+++.++.| .+.+.+.++|+++++.
T Consensus 78 ~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 78 NVEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred CCCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 99999999888 89999999888 4778888888877653
No 400
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.25 E-value=4.3e-12 Score=135.54 Aligned_cols=200 Identities=14% Similarity=0.119 Sum_probs=121.8
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHHc---CCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEM---GVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIY 154 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (1089)
|+|+|+||+||||+++...+.....++++++ |+.+.. ..|+........ ....+...............
T Consensus 2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i-----~TGR~~~~~~~~-~~~l~~~~~~i~~nGa~i~~-- 73 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIML-----VTGNTVQFAEAA-SILIGTSGPVVAEDGGAISY-- 73 (231)
T ss_dssp CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEE-----ECSSCHHHHHHH-HHHHTCCSCEEEGGGTEEEE--
T ss_pred ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEE-----EcCCChhHHHHH-HHHcCCCCeEEEeCCcEEEe--
Confidence 4799999999999998765555555555443 554211 223333322221 12222211000000000000
Q ss_pred HHHhcCCCCCCCCccHHHHHHHHH-hC-CCeE-----------EEEc-CCChHhHHHHHHHCCCCCCCccEEEEc----C
Q 001380 155 LDKYAKPNSGIGFPGALELINQCK-SK-GLKV-----------AVAS-SADRIKVDANLAAAGLPVSMFDAIVSA----D 216 (1089)
Q Consensus 155 ~~~~~~~~~~~~~pG~~~lL~~Lk-~~-Gi~v-----------aIvS-n~~~~~~~~~l~~~gl~~~~fd~i~~~----~ 216 (1089)
....... ..+ +.+.++++.++ +. |+.+ ++++ +...+.++.++++++ ..|+.+ ++ +
T Consensus 74 ~~~~~~~--~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~e 146 (231)
T 1wr8_A 74 KKKRIFL--ASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN---LNLVAV-DSGFAIH 146 (231)
T ss_dssp TTEEEES--CCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT---CSCEEE-ECSSCEE
T ss_pred CCEEEEe--ccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC---CcEEEE-ecCcEEE
Confidence 0000001 122 67777777777 54 5543 6666 556777888888864 346666 44 2
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 217 AFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 217 ~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
....++|++..++.+++++|++++++++|||+.+|+.+++.+|+. +.+.. ..+++++ .|++++.+..+-.+.++|.
T Consensus 147 i~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~--~~~~~~~-~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 147 VKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQ--APKILKE-NADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp EECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTT--SCHHHHT-TCSEECSSCHHHHHHHHHH
T ss_pred EecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecC--CCHHHHh-hCCEEecCCCcchHHHHHH
Confidence 245689999999999999999999999999999999999999976 44433 3455544 7999999887754455554
No 401
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.25 E-value=3.7e-12 Score=140.17 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=70.6
Q ss_pred CccEEEEc----CCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEe
Q 001380 208 MFDAIVSA----DAFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIR 283 (1089)
Q Consensus 208 ~fd~i~~~----~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi 283 (1089)
.+..+.+. +....+++|+..++.+++++|++++++++|||+.||+.|++.+| ++|.+|...+++++ .|++|+
T Consensus 178 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~-~A~~v~ 253 (279)
T 4dw8_A 178 KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAG---MGVAMGNAQEPVKK-AADYIT 253 (279)
T ss_dssp TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHH-HCSEEC
T ss_pred CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcC---cEEEcCCCcHHHHH-hCCEEc
Confidence 35555554 33445788899999999999999999999999999999999999 67777776677766 489999
Q ss_pred cCcccCCHHHHHhcc
Q 001380 284 KEIGSVSLNDILTGG 298 (1089)
Q Consensus 284 ~dl~el~i~~ll~~~ 298 (1089)
.+..+-.+...|...
T Consensus 254 ~~~~e~Gv~~~i~~~ 268 (279)
T 4dw8_A 254 LTNDEDGVAEAIERI 268 (279)
T ss_dssp CCGGGTHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHH
Confidence 998887777776654
No 402
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.25 E-value=3.2e-10 Score=129.84 Aligned_cols=228 Identities=12% Similarity=0.079 Sum_probs=142.3
Q ss_pred CceEEEeecCCe---EEEEe-------C-----CCCEEEEEeC--CCCEEEEEecCCCCCCCCCCCCccccCCcceeEEe
Q 001380 603 PGKLAIDILNNR---LFISD-------S-----NHNRIVVTDL--DGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYN 665 (1089)
Q Consensus 603 P~~vavd~~~g~---L~vsd-------~-----~~~~I~~~~~--~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d 665 (1089)
|..+++++ +|+ +|+++ . ..+.+.+++. +|+....+..... .....|++++++
T Consensus 85 ~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~s 153 (365)
T 1jof_A 85 PRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY----------QENTGIHGMVFD 153 (365)
T ss_dssp GGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC----------CTTCCEEEEEEC
T ss_pred CccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe----------CCCCcceEEEEC
Confidence 66788887 555 33444 1 3566666654 5766544332100 012478999999
Q ss_pred eCCCEEEEEECCCCEEEEEECC-CCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEE
Q 001380 666 AKKNLLYVADTENHALREIDFV-NDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHS 744 (1089)
Q Consensus 666 ~~g~~lyVaD~~n~~I~~~d~~-~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~ 744 (1089)
|+|+.||++|.+++.|+.++.+ +|.+..+....... .-..|++++|+|+|+.||+++...+.|..|+
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~------------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD------------PGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC------------CCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 9999999999988999999987 67665432110000 0136999999999999999998777776654
Q ss_pred --CCCCeEE----EEeCCCccccCCCCCCCCccccCCceEE-EcCCCCEEEEEeCCCC-----eEEEEEcC-CCCeEEEe
Q 001380 745 --TVDGVTR----AFSGDGYERNLNGSSSLNTSFAQPSGIS-LSPDFMEIYVADSESS-----SIRALNLK-TGGSRLLA 811 (1089)
Q Consensus 745 --~~~g~~~----~~~g~g~~~~~~g~~~~~~~~~~P~gla-v~~~g~~lyvad~~~~-----~I~~~~~~-~~~~~~~~ 811 (1089)
..+|... .+..... ...+..........|.+++ ++|||+.||+++...+ +|..++.+ ++....+.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~ 299 (365)
T 1jof_A 222 IDPATHMPVYTHHSFPLIPP--GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL 299 (365)
T ss_dssp ECTTTCCEEEEEEEEESSCT--TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE
T ss_pred EeCCCCcEEEccceEEcCCC--CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEee
Confidence 4456543 2221100 0000000000112588999 9999999999987765 89998875 45443221
Q ss_pred cCCCCCCCCccccCCCCCccccccccCceEEEEcc---CC-cEEEEeCCCCEEEEEeCCCCeEEEE
Q 001380 812 GGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK---NG-QIYVADSYNHKIKKLDPASNRVSTL 873 (1089)
Q Consensus 812 g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~---~G-~lyVaD~~n~~I~~~d~~~~~v~t~ 873 (1089)
.. .. ..-..|.+++++| +| .||+++..++.|..++.+++.+..+
T Consensus 300 ~~----------~~--------~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~~~ 347 (365)
T 1jof_A 300 FL----------SP--------TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRV 347 (365)
T ss_dssp EE----------EE--------CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEE
T ss_pred ee----------ee--------cCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCcee
Confidence 00 00 0012477889998 67 5999988889998887766655443
No 403
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.24 E-value=1.1e-11 Score=137.20 Aligned_cols=90 Identities=21% Similarity=0.439 Sum_probs=79.6
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
.++|+|||+||++||++|+.+.|.+.++.++++++ +.++.|++ |.+.++++.
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~---------------------------~~~~~~~~~ 75 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDC---------------------------DAEQMIAAQ 75 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEET---------------------------TTCHHHHHT
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeC---------------------------ccCHHHHHH
Confidence 35899999999999999999999999999999864 88999965 445689999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
|+|.++||++++ ++|+++.++.|..+.+.+.+++...+
T Consensus 76 ~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 76 FGLRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred cCCCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 999999999999 79999999999988888888876643
No 404
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.24 E-value=8.8e-12 Score=130.95 Aligned_cols=103 Identities=18% Similarity=0.338 Sum_probs=87.6
Q ss_pred CCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccc
Q 001380 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHP 518 (1089)
Q Consensus 439 ~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1089)
.+++..+.. ...++|++||+||++||++|+.+.|.+.++++++++. +.++.|++
T Consensus 101 ~l~~~~f~~-~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~------------------------ 154 (210)
T 3apq_A 101 TLERREFDA-AVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNC------------------------ 154 (210)
T ss_dssp ECCHHHHHH-HHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEET------------------------
T ss_pred EecHHHHHH-HHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEEC------------------------
Confidence 345555544 3357899999999999999999999999999999764 88999865
Q ss_pred eeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 519 VVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 519 v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
|.+.++++.|+|.++|+++++ ++|+++.++.|..+.+.+.++|+..+..
T Consensus 155 ---~~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 155 ---GDDRMLCRMKGVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp ---TTCHHHHHHTTCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHHC
T ss_pred ---CccHHHHHHcCCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCcc
Confidence 445689999999999999999 9999999999999999999999888753
No 405
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.23 E-value=1.5e-11 Score=116.34 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=77.0
Q ss_pred CCCceeeccccc--CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCcc
Q 001380 440 LNTAPLQFRRDL--KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISH 517 (1089)
Q Consensus 440 ~~g~~~~l~~~~--~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (1089)
++|...++.+.+ .+|++||+||++||++|+.+.|.|.++++++ .++.++.|.+
T Consensus 8 ~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~----------------------- 62 (118)
T 2f51_A 8 FNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDV----------------------- 62 (118)
T ss_dssp ECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEET-----------------------
T ss_pred ecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEEC-----------------------
Confidence 355544442123 4899999999999999999999999999998 4688899865
Q ss_pred ceeecCChhHHHHhCCCceeEEEEECC---CCcEEEEecCCCchhhHHHHHHH
Q 001380 518 PVVNDGDMNLWRELGVNSWPTFAVVGP---NGKLLAQLAGEGHRKDLDDLVEA 567 (1089)
Q Consensus 518 ~v~~d~~~~l~~~~~v~~~Pt~~lid~---~G~i~~~~~G~~~~~~l~~~l~~ 567 (1089)
|.+.++++.|+|.++|++++++. +|+++.++.|.... ++++.++.
T Consensus 63 ----~~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~~-~l~~~~~~ 110 (118)
T 2f51_A 63 ----DKNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADVS-RIKADIEK 110 (118)
T ss_dssp ----TTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCCHH-HHHHHHHH
T ss_pred ----CCCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCCHH-HHHHHHHH
Confidence 34567999999999999999965 49999999997643 45555544
No 406
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.23 E-value=6.7e-12 Score=121.83 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=77.3
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
+++ ++||+||++||++|+.+.|.|.+++++|+ +.++.|++.. ..+.. ..|...+++++
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~---~~~~~---------------~~d~~~~l~~~ 87 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGS---LIGER---------------ELSAARLEMNK 87 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECT---TCCHH---------------HHHHHHHHHHH
T ss_pred hCC-cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCC---chhhh---------------hhhhhHHHHHH
Confidence 345 89999999999999999999999999886 6677775521 11111 11345688999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
|+|.++|++++++ +|+++.++.|....+.+.++++.+++.
T Consensus 88 ~~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 88 AGVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HTCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred cCCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 9999999888885 999999999999999999888887764
No 407
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.23 E-value=7.9e-13 Score=132.99 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=79.0
Q ss_pred ceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeec
Q 001380 443 APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVND 522 (1089)
Q Consensus 443 ~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 522 (1089)
+.++. ...+||+|||+|||+||++|+.+.|.|.++.+.++. ++.++.|++ |
T Consensus 37 ~~~~~-~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~---------------------------d 87 (164)
T 1sen_A 37 DGKKE-AAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNL---------------------------E 87 (164)
T ss_dssp HHHHH-HHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEE---------------------------E
T ss_pred HHHHH-HHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEe---------------------------c
Confidence 34555 566899999999999999999999999998766542 234455533 1
Q ss_pred CChh-HHHHhCC--CceeEEEEECCCCcEEEEecCC----------CchhhHHHHHHHHHHHhccc
Q 001380 523 GDMN-LWRELGV--NSWPTFAVVGPNGKLLAQLAGE----------GHRKDLDDLVEAALLFYGKK 575 (1089)
Q Consensus 523 ~~~~-l~~~~~v--~~~Pt~~lid~~G~i~~~~~G~----------~~~~~l~~~l~~~l~~~~~~ 575 (1089)
.+.. +++.|++ .++|+++++|++|+++.++.|. ...+.+.+.|+++++.....
T Consensus 88 ~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~ 153 (164)
T 1sen_A 88 DEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTGD 153 (164)
T ss_dssp GGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHHGGG
T ss_pred CCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhccHh
Confidence 1112 4566777 6699999999999999888884 67889999999988877654
No 408
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.22 E-value=5.4e-12 Score=120.29 Aligned_cols=88 Identities=23% Similarity=0.475 Sum_probs=72.2
Q ss_pred CCCEEEEEEecCCCc--------------chhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCcc
Q 001380 452 KGKVVVLDFWTYCCI--------------NCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISH 517 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~--------------~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (1089)
+||++||+||++||+ +|+.+.|.+++++++|+++ +.++.|.+
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~----------------------- 75 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNI----------------------- 75 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEET-----------------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEEC-----------------------
Confidence 689999999999999 9999999999999988764 88888865
Q ss_pred ceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 518 PVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 518 ~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
|.+.+++++|+|.++|+++++ ++|+++.++.|..+.+++.++|+++
T Consensus 76 ----d~~~~l~~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 76 ----DQNPGTAPKYGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp ----TSCTTTGGGGTCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTT
T ss_pred ----CCCHHHHHHcCCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 445679999999999999999 9999999999998888888887653
No 409
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.22 E-value=4.9e-12 Score=140.02 Aligned_cols=125 Identities=8% Similarity=0.021 Sum_probs=87.7
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHC-CCCCCCccEEEEcC----CccCCCCCHHHHHHHHHHcCCCCC
Q 001380 166 GFPGALELINQCKSKGLKVAVASSADRIKVDANLAAA-GLPVSMFDAIVSAD----AFENLKPAPDIFLSASKILNVPTS 240 (1089)
Q Consensus 166 ~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~-gl~~~~fd~i~~~~----~~~~~KP~~~~~~~~l~~lgv~p~ 240 (1089)
.+++..+++..+....+++.+..+ .+....+++.+ ... ..+..+.+.. ....+.+|+..++.+++++|++++
T Consensus 143 ~~~~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 219 (290)
T 3dnp_A 143 FVESLSDLLMDEPVSAPVIEVYTE--HDIQHDITETITKAF-PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMD 219 (290)
T ss_dssp ECSCHHHHHHHSCCCCSEEEEECC--GGGHHHHHHHHHHHC-TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred ccCCHHHHHhcCCCCceEEEEeCC--HHHHHHHHHHHHhhC-CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHH
Confidence 355667777776666777755333 33444444442 111 2355555442 344578899999999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 241 ECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 241 ~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
++++|||+.||++|++.+| +.|..+...+++++ .+++++.+..+-.+...|..
T Consensus 220 ~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~-~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 220 DVVAIGHQYDDLPMIELAG---LGVAMGNAVPEIKR-KADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHH-HSSEECCCTTTTHHHHHHHH
T ss_pred HEEEECCchhhHHHHHhcC---CEEEecCCcHHHHH-hcCEECCCCCccHHHHHHHH
Confidence 9999999999999999999 45666665566655 58999999888655666654
No 410
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.86 E-value=1e-12 Score=126.70 Aligned_cols=103 Identities=19% Similarity=0.288 Sum_probs=83.9
Q ss_pred ceeecccccCCCEEEEEEecCCCcchhhhhhhH---HHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccce
Q 001380 443 APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDL---EFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPV 519 (1089)
Q Consensus 443 ~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v 519 (1089)
+.+++ ...+||++||+||++||++|+.+.|.+ .++.+.+++ ++.++.|.++ +
T Consensus 10 ~~~~~-~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~-----~------------------ 64 (130)
T 2lst_A 10 EALAL-AQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVD-----T------------------ 64 (130)
Confidence 34555 667899999999999999999999999 888887765 4777777431 1
Q ss_pred eecCChhHHHHhCCCceeEEEEECC-CCcE--EEEecCCCchhhHHHHHHHHHHHh
Q 001380 520 VNDGDMNLWRELGVNSWPTFAVVGP-NGKL--LAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 520 ~~d~~~~l~~~~~v~~~Pt~~lid~-~G~i--~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
+...++++.|+|.++|+++++|+ +|++ +.++.|..+.+.+.++|+.+++..
T Consensus 65 --~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 65 --PEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 23467899999999999999996 5999 888999888889999888877643
No 411
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.22 E-value=7.4e-10 Score=126.25 Aligned_cols=233 Identities=15% Similarity=0.135 Sum_probs=150.3
Q ss_pred CCCCceEEEeecCCeEEEEeCCC------CEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEE
Q 001380 600 LKFPGKLAIDILNNRLFISDSNH------NRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLY 672 (1089)
Q Consensus 600 l~~P~~vavd~~~g~L~vsd~~~------~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~ly 672 (1089)
+..|..+.+.+ +| +||+..++ +.|.++|.. ++++.++..++.. -..+.++.+.|+++.+|
T Consensus 137 ~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~-----------~~~~Yd~~~~p~~~~mv 203 (462)
T 2ece_A 137 YSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD-----------QYLAYDFWWNLPNEVLV 203 (462)
T ss_dssp EEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT-----------CCCCCCEEEETTTTEEE
T ss_pred CCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC-----------ccccceEEECCCCCEEE
Confidence 34688899997 66 99998776 799999987 7888777543111 11345677899999899
Q ss_pred EEECC------------------CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEE--ecCCCEEEE
Q 001380 673 VADTE------------------NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY--KPINEKVYI 732 (1089)
Q Consensus 673 VaD~~------------------n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~--~~~g~~lyv 732 (1089)
+++++ .++|..+|++++++......|..+ ..|.+|.+ +|++..+||
T Consensus 204 sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g--------------~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 204 SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN--------------RMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE--------------EEEEEEEECSSTTCCEEEE
T ss_pred EccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC--------------CccceeEeeECCCCCEEEE
Confidence 98853 799999999887654433333211 25888877 999999999
Q ss_pred EEC-----CCcEEEEEECCCCeEEEEeC--CCccccCCCCCC-C----CccccCCceEEEcCCCCEEEEEeCCCCeEEEE
Q 001380 733 AMA-----GQHQIWEHSTVDGVTRAFSG--DGYERNLNGSSS-L----NTSFAQPSGISLSPDFMEIYVADSESSSIRAL 800 (1089)
Q Consensus 733 ad~-----~~~~I~~~~~~~g~~~~~~g--~g~~~~~~g~~~-~----~~~~~~P~glav~~~g~~lyvad~~~~~I~~~ 800 (1089)
+.. .++.|+.+..++|......- .... ...+..+ . .+.-..|.+|.+++||+.|||++.+.+.|.+|
T Consensus 270 ~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~-~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavf 348 (462)
T 2ece_A 270 NMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE-PLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQY 348 (462)
T ss_dssp EEEEETTTCCEEEEEEEEETTEEEEEEEEEECCE-ECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEE
T ss_pred EEeeeccCCCceEEEEEecCCceeEEEEEeCCCc-cccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEE
Confidence 999 88999887766664322210 0000 0000000 0 00024699999999999999999999999999
Q ss_pred EcCCCC-eEEE---ecCCCCCCCCccccCCCCCccccccccCceEEEEccCC-cEEEEeC-------------CCCEEEE
Q 001380 801 NLKTGG-SRLL---AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADS-------------YNHKIKK 862 (1089)
Q Consensus 801 ~~~~~~-~~~~---~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G-~lyVaD~-------------~n~~I~~ 862 (1089)
+..+.. .+.+ ..|+.. ...-...|. ..-.+|.++++++|| .|||+++ .+..+.+
T Consensus 349 dV~d~~~~~lv~~I~tGG~~-----~~~~~~~G~---~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~ 420 (462)
T 2ece_A 349 DISNPFKPVLTGKVKLGGIF-----HRADHPAGH---KLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVK 420 (462)
T ss_dssp ECSSTTSCEEEEEEECBTTT-----TCBCCTTSC---CCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEE
T ss_pred EecCCCCcEEEEEEEeCCee-----ccccccccc---cCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEE
Confidence 975332 2221 111000 000000010 012369999999999 5999982 4556665
Q ss_pred E--eCCCC
Q 001380 863 L--DPASN 868 (1089)
Q Consensus 863 ~--d~~~~ 868 (1089)
+ |+++|
T Consensus 421 ~~vd~~~G 428 (462)
T 2ece_A 421 LNANPSGG 428 (462)
T ss_dssp EEECTTSC
T ss_pred EEecCCCC
Confidence 5 66666
No 412
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=4.6e-12 Score=123.33 Aligned_cols=89 Identities=15% Similarity=0.133 Sum_probs=74.6
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
.-+++++||+||++||++|+.+.|.|++++++|++.++.++.|.+ |.+.++++
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~---------------------------~~~~~~~~ 75 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDV---------------------------GRYTDVST 75 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCT---------------------------TTCHHHHH
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeC---------------------------ccCHHHHH
Confidence 345679999999999999999999999999999876799998854 33456778
Q ss_pred HhCCC------ceeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 530 ELGVN------SWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 530 ~~~v~------~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
.|+|. ++|+++++ ++|+++.++.|..+.+.+.+++.
T Consensus 76 ~~~v~~~~~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 76 RYKVSTSPLTKQLPTLILF-QGGKEAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp HTTCCCCSSSSCSSEEEEE-SSSSEEEEESCBCSSSCBCCCCC
T ss_pred HccCcccCCcCCCCEEEEE-ECCEEEEEecCcCchHHHHHHHh
Confidence 88887 99999999 89999999999887776665553
No 413
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.21 E-value=1.8e-11 Score=129.83 Aligned_cols=90 Identities=23% Similarity=0.475 Sum_probs=80.7
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++|++||+||++||++|+.+.|.|.+++++|+++ +.++.|++ |.+..+++.|
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~---------------------------d~~~~l~~~~ 80 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNI---------------------------DQNPGTAPKY 80 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEET---------------------------TTCTTTGGGG
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEEC---------------------------CCCHHHHHHc
Confidence 6899999999999999999999999999999865 88898865 4456789999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+.+++
T Consensus 81 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 81 GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred CCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhcc
Confidence 99999999999 599999999999999999999887764
No 414
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.20 E-value=1.6e-11 Score=116.43 Aligned_cols=88 Identities=25% Similarity=0.403 Sum_probs=76.4
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||+||++||++|+.+.|.|.++.+++++ ++.++.|++ |.+.++++.|
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~---------------------------~~~~~~~~~~ 80 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDV---------------------------DTNPETARNF 80 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEEC---------------------------CCCHHHHHhc
Confidence 578999999999999999999999999999976 488898865 3456789999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
+|.++|+++++ ++|+++.++.|..+.+.+.++|+++
T Consensus 81 ~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 81 QVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSC
T ss_pred CCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHH
Confidence 99999999888 6999999999998888887776543
No 415
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.20 E-value=3.2e-11 Score=106.31 Aligned_cols=82 Identities=20% Similarity=0.278 Sum_probs=70.5
Q ss_pred CEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHhCC
Q 001380 454 KVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGV 533 (1089)
Q Consensus 454 k~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v 533 (1089)
.++|+.||++||++|+.+.|.|+++++++++ ++.++.|++ |.+.++++.|++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~---------------------------~~~~~~~~~~~v 54 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINV---------------------------MENPQKAMEYGI 54 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEES---------------------------SSSCCTTTSTTT
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEEC---------------------------CCCHHHHHHCCC
Confidence 5789999999999999999999999999985 588998865 344578899999
Q ss_pred CceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 534 NSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 534 ~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
.++|++++ +|++ ++.|..+.+.+.++|+++
T Consensus 55 ~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 55 MAVPTIVI---NGDV--EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp CCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHH
T ss_pred cccCEEEE---CCEE--eeecCCCHHHHHHHHHHh
Confidence 99999988 8887 788888888888888764
No 416
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.19 E-value=3.2e-09 Score=120.48 Aligned_cols=249 Identities=12% Similarity=0.073 Sum_probs=144.6
Q ss_pred CCceEEEeecCCeEEEEeC---------CCCEEEEEeCC-CCEEEEEecCC-CCCCCCCCCCccccCCcceeEEeeCCCE
Q 001380 602 FPGKLAIDILNNRLFISDS---------NHNRIVVTDLD-GNFIVQIGSSG-EEGLRDGSFDDATFNRPQGLAYNAKKNL 670 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~---------~~~~I~~~~~~-g~~~~~i~~~g-~~g~~dG~~~~~~f~~P~gla~d~~g~~ 670 (1089)
.|. ++++|++..|||+++ ..+.|.++|.. ++.+..|..++ .. ...-.+|.+++++++|++
T Consensus 80 ~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r--------~~~g~~P~~~a~spDGk~ 150 (386)
T 3sjl_D 80 LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPR--------FLVGTYPWMTSLTPDGKT 150 (386)
T ss_dssp SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC--------CCBSCCGGGEEECTTSSE
T ss_pred CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccc--------cccCCCCceEEEcCCCCE
Confidence 465 999998888999985 24679999987 66666665431 10 001237999999999999
Q ss_pred EEEEECC-CCEEEEEECCCCeEE-EEecCCCC-----CC--------CC-------CC-CCc-ccccccC----Ccee--
Q 001380 671 LYVADTE-NHALREIDFVNDTVR-TLAGNGTK-----GS--------DY-------QG-GEK-GTSQLLN----SPWD-- 720 (1089)
Q Consensus 671 lyVaD~~-n~~I~~~d~~~g~v~-~~ag~g~~-----~~--------~~-------~~-~~~-~~~~~l~----~P~~-- 720 (1089)
+||++.. .+.|.+||..++++. ++.-.|.. +. +. .. +.. .....+. .|..
T Consensus 151 lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~ 230 (386)
T 3sjl_D 151 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINH 230 (386)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSC
T ss_pred EEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccc
Confidence 9999974 789999999987754 44221100 00 00 00 000 0000010 1110
Q ss_pred EEEe-cCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCc---eEEEcCCCCEEEEEeC----
Q 001380 721 VCYK-PINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS---GISLSPDFMEIYVADS---- 792 (1089)
Q Consensus 721 la~~-~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~---glav~~~g~~lyvad~---- 792 (1089)
.+++ ++|..+|+++ .++|+.+|..++......... .........+ ..|. .+++++++++|||+..
T Consensus 231 ~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~----~~~~~~~~~g-~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 231 PAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVE----ALTEAERADG-WRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp CEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEE----SSCHHHHHTT-EEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred ceeEcCCCcEEEEeC--CCEEEEEECCCCcceeeccee----cccccccccc-ccCCCcceeeECCCCCeEEEEeccccc
Confidence 2333 2221233333 245555555444322111000 0000000000 0122 3788999999999864
Q ss_pred -----CCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc--EEEEeCCCCEEEEEeC
Q 001380 793 -----ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ--IYVADSYNHKIKKLDP 865 (1089)
Q Consensus 793 -----~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~--lyVaD~~n~~I~~~d~ 865 (1089)
..++|.++|..++.+..... .| ..|+++++++||+ +|+++...+.|.+||.
T Consensus 304 ~~hk~~~~~V~viD~~t~kv~~~i~-----------vg-----------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKTGERLAKFE-----------MG-----------HEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEE-----------EE-----------EEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred cccCCCCCEEEEEECCCCeEEEEEE-----------CC-----------CCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 23689999999877642211 00 2588999999985 8999999999999999
Q ss_pred CCCeEEEEeccCCCCCCCCcccccccCCCceEEEccC
Q 001380 866 ASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQN 902 (1089)
Q Consensus 866 ~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~ 902 (1089)
.++++..-.. ....|..|++.+|
T Consensus 362 ~t~k~~~~i~--------------~~~~p~~l~~s~d 384 (386)
T 3sjl_D 362 ESGEELRSVN--------------QLGHGPQVITTAD 384 (386)
T ss_dssp TTCCEEEEEC--------------CCCSSCCEEEECC
T ss_pred CCCcEEEEec--------------CCCCCceeEECCc
Confidence 8776654433 2345888887654
No 417
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.19 E-value=2.4e-09 Score=118.56 Aligned_cols=216 Identities=13% Similarity=0.132 Sum_probs=156.7
Q ss_pred eecCCeEEEEeCC-------------CCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEE
Q 001380 609 DILNNRLFISDSN-------------HNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVAD 675 (1089)
Q Consensus 609 d~~~g~L~vsd~~-------------~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD 675 (1089)
.+.++.||.++.. .+.|++++.+|.....+... .+.++.++|+.||++|
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~------------------~~~~~s~~g~~Iy~~~ 122 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD------------------PCIYASLIGNYIYYLH 122 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS------------------CEEEEEEETTEEEEEE
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC------------------CccEEEEeCCEEEEEe
Confidence 3458889988654 46899999998765554332 3446777899999999
Q ss_pred ---CCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEE
Q 001380 676 ---TENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA 752 (1089)
Q Consensus 676 ---~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~ 752 (1089)
.++..|+++++++...+++..... .++++.++.||+++.+..+|++.+..++..+.
T Consensus 123 ~~~~~~~~Iy~~~~dGs~~~~lt~~~~---------------------~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 123 YDTQTATSLYRIRIDGEEKKKIKNHYL---------------------FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp ESSSSCEEEEEEETTSCCCEEEESSCC---------------------CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred ecCCCCceEEEEECCCCCeEEEeCCCc---------------------eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 678899999999877777753210 23466788999999989999999998887666
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCC-CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSES-SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMG 831 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~-~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~ 831 (1089)
+.. + +..+++.|+++.||+++... ..|.+++++++..+.+....
T Consensus 182 l~~-~-----------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~----------------- 226 (302)
T 3s25_A 182 FYD-C-----------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEAN----------------- 226 (302)
T ss_dssp EEC-S-----------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSC-----------------
T ss_pred EeC-C-----------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCC-----------------
Confidence 642 1 12234668888999999764 58999999987766553210
Q ss_pred ccccccCceEEEEccCC-cEEEE-eCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEE
Q 001380 832 SEVLLQHPLGVYCAKNG-QIYVA-DSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIAD 909 (1089)
Q Consensus 832 ~~~~l~~P~gva~~~~G-~lyVa-D~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad 909 (1089)
+ | .++++| .||++ +...+.|.+++.+|....++... ...+|++. ++.||++|
T Consensus 227 ----~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~----------------~~~~i~i~-~d~Iy~td 280 (302)
T 3s25_A 227 ----I--E---HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG----------------EFCNINVT-SQYVYFTD 280 (302)
T ss_dssp ----E--E---EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES----------------CEEEEEEC-SSEEEEEE
T ss_pred ----c--c---eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC----------------ccceEEEe-CCEEEEEE
Confidence 1 2 256655 68886 66678999999988776776521 12256665 45799999
Q ss_pred CCCCEEEEEeCCCCC
Q 001380 910 TNNNIIRYLDLNKEE 924 (1089)
Q Consensus 910 ~~n~~I~~~~~~~~~ 924 (1089)
...+.|.+++++|..
T Consensus 281 ~~~~~i~~~~~dGs~ 295 (302)
T 3s25_A 281 FVSNKEYCTSTQNPD 295 (302)
T ss_dssp TTTCCEEEEESSSCC
T ss_pred CCCCeEEEEECCCCC
Confidence 999999999988863
No 418
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.18 E-value=5.1e-11 Score=112.50 Aligned_cols=90 Identities=12% Similarity=0.222 Sum_probs=70.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.|+++||+||++||++|+.+.|.|.++.++++. .+.++.+ +...+. +...++++.|
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~~-----~~~~~~------------------~~~~~~~~~~ 83 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYFINS-----EEPSQL------------------NDLQAFRSRY 83 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEEEET-----TCGGGH------------------HHHHHHHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEEEEC-----CCcCcH------------------HHHHHHHHHc
Confidence 578999999999999999999999999998863 3544443 222221 1234678899
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
+|.++|+++++ ++|+++.++.|....+.+.++|+
T Consensus 84 ~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 84 GIPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp TCCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHT
T ss_pred CCCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhh
Confidence 99999999999 69999999999988888877763
No 419
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=99.18 E-value=4.4e-13 Score=151.00 Aligned_cols=72 Identities=21% Similarity=0.246 Sum_probs=59.2
Q ss_pred ccCCCCCHHHHHHHHHHc----------------------CC-----CCCcEEEEcCCh-hhHHHHHHcCCeEEEEcCCC
Q 001380 218 FENLKPAPDIFLSASKIL----------------------NV-----PTSECIVIEDAL-AGVQAAKAAQMRCIAVTTTL 269 (1089)
Q Consensus 218 ~~~~KP~~~~~~~~l~~l----------------------gv-----~p~~~v~VGD~~-~Di~aA~~aG~~~i~V~~g~ 269 (1089)
...+||.+.+|+.+++.+ |+ ++++++||||++ +||.+|+++||++++|.+|.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 346899999999887654 22 569999999999 79999999999999999987
Q ss_pred C-HHHH-hhcCCcEEecCcccC
Q 001380 270 S-EERL-KEASPSLIRKEIGSV 289 (1089)
Q Consensus 270 ~-~~~l-~~~~~d~vi~dl~el 289 (1089)
. .+.. ....|+++++++.++
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~el 343 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVFDA 343 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHHHH
T ss_pred CCcccccccCCCCEEECCHHHH
Confidence 3 3222 246899999999888
No 420
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.18 E-value=1.7e-11 Score=116.30 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=77.7
Q ss_pred CCCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC----CCEEEEEEeCCCCCChhcHHHHHHHHHHcC
Q 001380 439 WLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD----MPFTVVGVHSAKFDNEKDLEAIRNAVLRYG 514 (1089)
Q Consensus 439 ~~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~----~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~ 514 (1089)
.+++..+...-..++|++||+||++||++|+.+.|.|++++++|++ .++.++.|.++ +
T Consensus 11 ~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~-----~------------- 72 (121)
T 2djj_A 11 VVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT-----A------------- 72 (121)
T ss_dssp ECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT-----T-------------
T ss_pred EecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc-----c-------------
Confidence 3455555431124789999999999999999999999999999986 26888888642 1
Q ss_pred CccceeecCChhHHHHhCCCceeEEEEECCCCcE-EEEecCCCchhhHHHHHHHHH
Q 001380 515 ISHPVVNDGDMNLWRELGVNSWPTFAVVGPNGKL-LAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 515 ~~~~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i-~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+ .+++ +|.++|++++++++|++ +.++.|..+.+.+.++|++.+
T Consensus 73 ---------~-~~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 73 ---------N-DVPD--EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp ---------S-CCSS--CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred ---------c-cccc--ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 0 1333 99999999999888885 667889888888888877644
No 421
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.18 E-value=2.4e-11 Score=107.14 Aligned_cols=82 Identities=21% Similarity=0.321 Sum_probs=69.6
Q ss_pred EEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHhCCC
Q 001380 455 VVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVN 534 (1089)
Q Consensus 455 ~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~ 534 (1089)
++|++||++||++|+.+.|.|+++++++++ ++.++.|++ |.+.++++.|+|.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~---------------------------~~~~~~~~~~~v~ 54 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDI---------------------------MVDREKAIEYGLM 54 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECT---------------------------TTCGGGGGGTCSS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEEC---------------------------CCCHHHHHhCCce
Confidence 468999999999999999999999999985 478888854 3456789999999
Q ss_pred ceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 535 SWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 535 ~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
++|++++ +|++ ++.|..+.+.+.++|++.+
T Consensus 55 ~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 55 AVPAIAI---NGVV--RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp CSSEEEE---TTTE--EEECSSCCHHHHHHHHHHC
T ss_pred eeCEEEE---CCEE--EEccCCCHHHHHHHHHHHh
Confidence 9999988 8888 7778878888888887654
No 422
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.17 E-value=3.1e-09 Score=117.59 Aligned_cols=226 Identities=12% Similarity=0.151 Sum_probs=161.1
Q ss_pred CCCCCCCCceEEEeecCCeEEEEeCC-CCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEE
Q 001380 596 FTSPLKFPGKLAIDILNNRLFISDSN-HNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVA 674 (1089)
Q Consensus 596 ~~~~l~~P~~vavd~~~g~L~vsd~~-~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVa 674 (1089)
.++.|..=+.++.+ ++.+|+++.. .++|++++.+|.....+... .+..| .++|+.||.+
T Consensus 11 ~~~Ni~n~g~~~~~--g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~----------------~~~~i--~~~g~~Iyy~ 70 (302)
T 3s25_A 11 TAGNLYNAGLFCES--DGEVFFSNTNDNGRLYAMNIDGSNIHKLSND----------------TAMYI--NADKNYVYYV 70 (302)
T ss_dssp CTTTGGGTTCEEEE--TTEEEEEEGGGTTEEEEEETTSCSCEEEEEE----------------EEEEE--EECSSEEEEE
T ss_pred cccceecceEEEEe--CCEEEEEeCCCCceEEEEcCCCCCCEEccCC----------------ceeeE--EEcCCEEEEE
Confidence 35667777777765 8999999854 67999999998776666543 12344 4568888888
Q ss_pred ECC-------------CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEE---CCCc
Q 001380 675 DTE-------------NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAM---AGQH 738 (1089)
Q Consensus 675 D~~-------------n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad---~~~~ 738 (1089)
+.. .+.|++++++++..+.+.. -.+.++++.++.||+++ .++.
T Consensus 71 ~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---------------------~~~~~~s~~g~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 71 RNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---------------------DPCIYASLIGNYIYYLHYDTQTAT 129 (302)
T ss_dssp EECC------CCSSCCSEEEEEEETTSCCCEEEEC---------------------SCEEEEEEETTEEEEEEESSSSCE
T ss_pred ECCCCcccccceeccCCCeEEEEeCCCCcceEeec---------------------CCccEEEEeCCEEEEEeecCCCCc
Confidence 654 3689999999887666642 11335677789999999 6788
Q ss_pred EEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCC
Q 001380 739 QIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFP 818 (1089)
Q Consensus 739 ~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~ 818 (1089)
.|++++..+...+.+.... . ++++++|++||+++.+..+|++++++++..+.+..+
T Consensus 130 ~Iy~~~~dGs~~~~lt~~~------------~-------~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~----- 185 (302)
T 3s25_A 130 SLYRIRIDGEEKKKIKNHY------------L-------FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC----- 185 (302)
T ss_dssp EEEEEETTSCCCEEEESSC------------C-------CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS-----
T ss_pred eEEEEECCCCCeEEEeCCC------------c-------eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC-----
Confidence 9999999876666665321 0 345677889999999889999999987766655321
Q ss_pred CCccccCCCCCccccccccCceEEEEccC-CcEEEEeCCC-CEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCce
Q 001380 819 DNLFKFGDRDGMGSEVLLQHPLGVYCAKN-GQIYVADSYN-HKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAG 896 (1089)
Q Consensus 819 ~~l~~~g~~dg~~~~~~l~~P~gva~~~~-G~lyVaD~~n-~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~g 896 (1089)
+....+.|+ |.||+++... .+|.+++.+++..+.+... .+ |
T Consensus 186 --------------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~-------------~~--~-- 228 (302)
T 3s25_A 186 --------------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA-------------NI--E-- 228 (302)
T ss_dssp --------------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS-------------CE--E--
T ss_pred --------------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC-------------Cc--c--
Confidence 222334454 5799999764 6999999998887776421 11 2
Q ss_pred EEEccCC-cEEEE-ECCCCEEEEEeCCCCC
Q 001380 897 IIEAQNG-NLFIA-DTNNNIIRYLDLNKEE 924 (1089)
Q Consensus 897 i~vd~~G-~lyVa-d~~n~~I~~~~~~~~~ 924 (1089)
.++++| .||++ +...+.|.+++++|..
T Consensus 229 -~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 229 -HYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp -EEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred -eEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 245444 68886 5667899999999973
No 423
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=99.17 E-value=5.2e-11 Score=128.47 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=76.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC---hHhHHHHHHHCCCC-CCCccEEEEcCCccCCCCCHHHHHHHHHHcCCCCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSAD---RIKVDANLAAAGLP-VSMFDAIVSADAFENLKPAPDIFLSASKILNVPTS 240 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~---~~~~~~~l~~~gl~-~~~fd~i~~~~~~~~~KP~~~~~~~~l~~lgv~p~ 240 (1089)
.++||+.++|+.|+++|++++|+||+. +..+...|+.+|+. ..+++.+++.++. .||.+ ...++ ..+. .
T Consensus 101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K~~~--~~~~~-~~~~--~ 173 (258)
T 2i33_A 101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KGKEK--RRELV-SQTH--D 173 (258)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CSSHH--HHHHH-HHHE--E
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CCcHH--HHHHH-HhCC--C
Confidence 789999999999999999999999987 56677888999995 1567888887643 45544 33332 3343 4
Q ss_pred cEEEEcCChhhHHHHH-------H---------cCCeEEEEcCCC
Q 001380 241 ECIVIEDALAGVQAAK-------A---------AQMRCIAVTTTL 269 (1089)
Q Consensus 241 ~~v~VGD~~~Di~aA~-------~---------aG~~~i~V~~g~ 269 (1089)
.|+||||+.+|+.+|. + +|+++|.+..+.
T Consensus 174 ~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~ 218 (258)
T 2i33_A 174 IVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM 218 (258)
T ss_dssp EEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred ceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence 4999999999999992 4 899999987764
No 424
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.16 E-value=1.4e-11 Score=116.42 Aligned_cols=90 Identities=18% Similarity=0.357 Sum_probs=75.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCC--CEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM--PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~--~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
++|++||+||++||++|+.+.|.+.++++++++. .+.++.|.+ +.+.++++
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~---------------------------~~~~~~~~ 75 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDA---------------------------TEESDLAQ 75 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEET---------------------------TTCCSSHH
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcC---------------------------CCCHHHHH
Confidence 6899999999999999999999999999998753 577777754 23457899
Q ss_pred HhCCCceeEEEEECCCCcEE--EEecCCCchhhHHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLL--AQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~--~~~~G~~~~~~l~~~l~~~l 569 (1089)
.|+|.++|+++++ ++|+++ ..+.|..+.+.+.++|++.+
T Consensus 76 ~~~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 76 QYGVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp HHTCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred HCCCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 9999999999999 789877 78889888888888876543
No 425
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=99.15 E-value=5.5e-11 Score=130.22 Aligned_cols=107 Identities=13% Similarity=0.089 Sum_probs=81.7
Q ss_pred eEEEEcCCChHhHHHHHHHCCCCCCCccEEEEcC------CccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 001380 183 KVAVASSADRIKVDANLAAAGLPVSMFDAIVSAD------AFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAK 256 (1089)
Q Consensus 183 ~vaIvSn~~~~~~~~~l~~~gl~~~~fd~i~~~~------~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~ 256 (1089)
++.+. ...+....+.+.++.. |+.+.+.. ....+++|+..++.+++++|++++++++|||+.||+.|++
T Consensus 159 ki~~~--~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~ 233 (274)
T 3fzq_A 159 KICLW--SNEKVFDEVKDILQDK---MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQ 233 (274)
T ss_dssp EEEEE--CCHHHHHHHHHHHGGG---EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHH
T ss_pred EEEEE--cCHHHHHHHHHHhhcc---eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHH
Confidence 44444 4556667777766542 55555543 3556899999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 257 AAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 257 ~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
.+| +.|.+|...+++++ .+++++.+..+-.+...|..+
T Consensus 234 ~ag---~~vam~na~~~~k~-~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 234 ASD---VTIAMKNSHQQLKD-IATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp TCS---EEEEETTSCHHHHH-HCSEEECCGGGTHHHHHHHHT
T ss_pred hcC---ceEEecCccHHHHH-hhhheeCCCchhHHHHHHHHh
Confidence 999 56666765666665 589999999887777776543
No 426
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.14 E-value=3.5e-09 Score=124.26 Aligned_cols=174 Identities=17% Similarity=0.310 Sum_probs=114.2
Q ss_pred cCCcceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecC---CCEEEE
Q 001380 656 FNRPQGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPI---NEKVYI 732 (1089)
Q Consensus 656 f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~---g~~lyv 732 (1089)
+..|.+|+++++|+ |||++...++|++++..++..+++......-.. ......+.||+++|+ ++.|||
T Consensus 26 l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~--------~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 26 LNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVND--------ADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCC--------TTSSCSEEEEEECTTTTTSCEEEE
T ss_pred CCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccc--------cCCCCceeEEEECCCcCcCCEEEE
Confidence 66899999999998 999998878999999877777766532211000 001236789999996 679999
Q ss_pred EECC------------CcEEEEEECCCC--eE---EE-EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC-
Q 001380 733 AMAG------------QHQIWEHSTVDG--VT---RA-FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE- 793 (1089)
Q Consensus 733 ad~~------------~~~I~~~~~~~g--~~---~~-~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~- 793 (1089)
+... .++|++++...+ .+ +. +.+.. ......+.+|++++|| +|||+...
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p-----------~~~~H~~~~l~f~pDG-~Lyv~~Gd~ 164 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP-----------SSKDHQSGRLVIGPDQ-KIYYTIGDQ 164 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC-----------CCSSCCEEEEEECTTS-CEEEEECCT
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC-----------CCCCCCCCeEeECCCC-eEEEEECCC
Confidence 9864 468888876432 22 11 21110 0123468999999999 89998432
Q ss_pred -------------------------------CCeEEEEEcCCCCeEEEecCCCCC---CCCccccCCCCCccccccccCc
Q 001380 794 -------------------------------SSSIRALNLKTGGSRLLAGGDPIF---PDNLFKFGDRDGMGSEVLLQHP 839 (1089)
Q Consensus 794 -------------------------------~~~I~~~~~~~~~~~~~~g~~~~~---~~~l~~~g~~dg~~~~~~l~~P 839 (1089)
.++|.++++++. +..+.+.. ...+++.| +.+|
T Consensus 165 ~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~----ip~~Npf~~~~~~ei~a~G----------~RNp 230 (454)
T 1cru_A 165 GRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGS----IPKDNPSFNGVVSHIYTLG----------HRNP 230 (454)
T ss_dssp TTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSC----CCTTCCEETTEECSEEEBC----------CSEE
T ss_pred CCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCC----CCCCCCCCCCCcceEEEEC----------CCCc
Confidence 367888887643 11111110 01223334 4589
Q ss_pred eEEEEccCCcEEEEeCCCC---EEEEEe
Q 001380 840 LGVYCAKNGQIYVADSYNH---KIKKLD 864 (1089)
Q Consensus 840 ~gva~~~~G~lyVaD~~n~---~I~~~d 864 (1089)
.|++++++|.||++|.+.. .|..+.
T Consensus 231 ~gla~dp~G~L~~~d~g~~~~dein~i~ 258 (454)
T 1cru_A 231 QGLAFTPNGKLLQSEQGPNSDDEINLIV 258 (454)
T ss_dssp EEEEECTTSCEEEEEECSSSCEEEEECC
T ss_pred ceEEECCCCCEEEEecCCCCCeEEEEec
Confidence 9999999999999997654 444443
No 427
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.14 E-value=6.5e-11 Score=127.08 Aligned_cols=101 Identities=20% Similarity=0.355 Sum_probs=82.9
Q ss_pred CCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCC--EEEEEEeCCCCCChhcHHHHHHHHHHcCCcc
Q 001380 440 LNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMP--FTVVGVHSAKFDNEKDLEAIRNAVLRYGISH 517 (1089)
Q Consensus 440 ~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~--v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (1089)
+++..+.. ...+||++||+|||+||++|+.++|.|.++++++++.+ +.++.|.+
T Consensus 20 l~~~~~~~-~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~----------------------- 75 (241)
T 3idv_A 20 LNDANFDN-FVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDA----------------------- 75 (241)
T ss_dssp ECTTTHHH-HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEET-----------------------
T ss_pred ecccCHHH-HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEec-----------------------
Confidence 34554443 34478999999999999999999999999999997654 88888854
Q ss_pred ceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 518 PVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 518 ~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
|.+.++++.|+|.++|++++++ +|+.+ .+.|..+.+.+.+++...+.
T Consensus 76 ----~~~~~l~~~~~v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~~ 122 (241)
T 3idv_A 76 ----TSASVLASRFDVSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVSQ 122 (241)
T ss_dssp ----TTCHHHHHHTTCCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHHS
T ss_pred ----cCCHHHHHhcCCCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhccC
Confidence 4567899999999999999994 67776 58899899999888887654
No 428
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.13 E-value=2e-11 Score=119.88 Aligned_cols=97 Identities=14% Similarity=0.081 Sum_probs=72.5
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHH--HcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEK--KYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNL 527 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~--~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l 527 (1089)
...||+|||+|||+||++|+.+.|.+.+..+ ++.+..+..|.|. +....+
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD----------------------------~e~~~~ 92 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM----------------------------HETTDK 92 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES----------------------------SCCSCG
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec----------------------------CCchhh
Confidence 3468999999999999999999998876422 2222246666661 112234
Q ss_pred HHHhCCCceeEEEEECCCCcEEEEecCC-------CchhhHHHHHHHHHHHhcc
Q 001380 528 WRELGVNSWPTFAVVGPNGKLLAQLAGE-------GHRKDLDDLVEAALLFYGK 574 (1089)
Q Consensus 528 ~~~~~v~~~Pt~~lid~~G~i~~~~~G~-------~~~~~l~~~l~~~l~~~~~ 574 (1089)
+..|++.++||++++|++|+++.+..|. ...+++.++|+.+.+.+++
T Consensus 93 ~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~ 146 (151)
T 3ph9_A 93 NLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRL 146 (151)
T ss_dssp GGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSC
T ss_pred HhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHH
Confidence 6678999999999999999999999997 5567777777777666553
No 429
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.13 E-value=6.2e-11 Score=118.86 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=72.0
Q ss_pred eeecccccCCCEEEEEEecCCCcchhhhhhh---HHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCcccee
Q 001380 444 PLQFRRDLKGKVVVLDFWTYCCINCMHVLPD---LEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVV 520 (1089)
Q Consensus 444 ~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~---l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 520 (1089)
.+.. ...+||+|||+|||+||++|+.+.|. ..++.+.+.+ ++++|.|.. ++.++....+.+
T Consensus 31 a~~~-A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~-----de~~~l~~~y~~--------- 94 (173)
T 3ira_A 31 AFEK-ARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDR-----EERPDIDNIYMT--------- 94 (173)
T ss_dssp HHHH-HHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEET-----TTCHHHHHHHHH---------
T ss_pred HHHH-HHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCC-----cccCcHHHHHHH---------
Confidence 3444 45579999999999999999997772 2344444433 478888843 333333222221
Q ss_pred ecCChhHHHHhCCCceeEEEEECCCCcEEEEec-----CCCchhhHHHHHHHHHHHhcc
Q 001380 521 NDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLA-----GEGHRKDLDDLVEAALLFYGK 574 (1089)
Q Consensus 521 ~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~-----G~~~~~~l~~~l~~~l~~~~~ 574 (1089)
.+...+|+.++|++++++++|++++... +......+.++|+.+.+.++.
T Consensus 95 -----~~q~~~gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~~~~ 148 (173)
T 3ira_A 95 -----VCQIILGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQ 148 (173)
T ss_dssp -----HHHHHHSCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHHHHH
T ss_pred -----HHHHHcCCCCCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 1222359999999999999999998722 122445677777777665543
No 430
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=99.12 E-value=1.3e-10 Score=129.46 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=87.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChH---hHHHHHHH--------CCCCCCCccEEEEcCCccCCCCCHHHHHHHHH
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSADRI---KVDANLAA--------AGLPVSMFDAIVSADAFENLKPAPDIFLSASK 233 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~~~---~~~~~l~~--------~gl~~~~fd~i~~~~~~~~~KP~~~~~~~~l~ 233 (1089)
.++||+.++|+.|+++|++++|+||.... .+...++. +|+. |+.++++++. ..||+|+++..+++
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~-~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---LVMQCQREQG-DTRKDDVVKEEIFW 263 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---CSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---chheeeccCC-CCcHHHHHHHHHHH
Confidence 35899999999999999999999998643 34667777 8883 8999988765 46999999999999
Q ss_pred HcCCCCCc-EEEEcCChhhHHHHHHcCCeEEEEcCC
Q 001380 234 ILNVPTSE-CIVIEDALAGVQAAKAAQMRCIAVTTT 268 (1089)
Q Consensus 234 ~lgv~p~~-~v~VGD~~~Di~aA~~aG~~~i~V~~g 268 (1089)
+++..+.+ |+||||+..|+++|+++||.+++|.+|
T Consensus 264 ~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 264 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 99887655 799999999999999999999999987
No 431
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.12 E-value=2.5e-10 Score=125.77 Aligned_cols=111 Identities=8% Similarity=-0.006 Sum_probs=79.4
Q ss_pred hCCCeEEEEc-CCCh-HhHHHHHHHCCCCCCCccEEEEcCC----ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 001380 179 SKGLKVAVAS-SADR-IKVDANLAAAGLPVSMFDAIVSADA----FENLKPAPDIFLSASKILNVPTSECIVIEDALAGV 252 (1089)
Q Consensus 179 ~~Gi~vaIvS-n~~~-~~~~~~l~~~gl~~~~fd~i~~~~~----~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di 252 (1089)
+..+++.++. .... ...+.+.+.++- .+..+.+... ...+.+|+..++.+++++|++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~---~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNK---KAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTT---TEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcC---CEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 5568888883 3222 223344444442 3555555542 34567799999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 253 QAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 253 ~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
+|++.+| +.|..+...+++++ .|++|+.+..+-.+..+|.
T Consensus 241 ~ml~~ag---~~vam~na~~~~k~-~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 241 EMLQNAG---ISYAVSNARQEVIA-AAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp HHHHHSS---EEEEETTSCHHHHH-HSSEEECCGGGTHHHHHHH
T ss_pred HHHHhCC---CEEEcCCCCHHHHH-hcCeECCCCCCChHHHHHH
Confidence 9999999 44555655566655 5899999888866666654
No 432
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.11 E-value=8.8e-09 Score=115.93 Aligned_cols=168 Identities=17% Similarity=0.157 Sum_probs=116.0
Q ss_pred ceeEEeeCCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcE
Q 001380 660 QGLAYNAKKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQ 739 (1089)
Q Consensus 660 ~gla~d~~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~ 739 (1089)
.|+++.++++ +|++...++.|+++|+.++.+......+. ...|.+++++|+|+.+|++...+++
T Consensus 3 ~g~~~~~~~~-~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~~~~s~dg~~~~v~~~~~~~ 66 (349)
T 1jmx_B 3 TGPALKAGHE-YMIVTNYPNNLHVVDVASDTVYKSCVMPD---------------KFGPGTAMMAPDNRTAYVLNNHYGD 66 (349)
T ss_dssp -CCCCCTTCE-EEEEEETTTEEEEEETTTTEEEEEEECSS---------------CCSSCEEEECTTSSEEEEEETTTTE
T ss_pred ccccccCCCE-EEEEeCCCCeEEEEECCCCcEEEEEecCC---------------CCCCceeEECCCCCEEEEEeCCCCc
Confidence 5677776555 99999999999999998887654432221 1258899999999899999999999
Q ss_pred EEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC-----------CCeEEEEEcCCCCeE
Q 001380 740 IWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE-----------SSSIRALNLKTGGSR 808 (1089)
Q Consensus 740 I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~-----------~~~I~~~~~~~~~~~ 808 (1089)
|+.+|..++........+.. + ...-..|.+++++++|+.||++... .+.|+.+++.++...
T Consensus 67 i~~~d~~t~~~~~~~~~~~~-------~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 67 IYGIDLDTCKNTFHANLSSV-------P-GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp EEEEETTTTEEEEEEESCCS-------T-TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred EEEEeCCCCcEEEEEEcccc-------c-ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc
Confidence 99999998876533211100 0 0112358899999999999999854 578999998754321
Q ss_pred EEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEE
Q 001380 809 LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTL 873 (1089)
Q Consensus 809 ~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~ 873 (1089)
.... .+.. -..+.+++++++|++|+++ +.|.++|..++.+...
T Consensus 139 ~~~~----------~~~~---------~~~~~~~~~s~dg~l~~~~---~~i~~~d~~~~~~~~~ 181 (349)
T 1jmx_B 139 KPVR----------TFPM---------PRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVA 181 (349)
T ss_dssp CCSE----------EEEC---------CSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEE
T ss_pred ceee----------eccC---------CCcccceeECCCCcEEEcc---CcEEEEeCCCCceecc
Confidence 0000 0000 0146778899999988864 3499999987765543
No 433
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.11 E-value=8e-12 Score=137.51 Aligned_cols=75 Identities=9% Similarity=0.078 Sum_probs=53.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhcc
Q 001380 220 NLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTGG 298 (1089)
Q Consensus 220 ~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~~ 298 (1089)
.+..|+..++.+++++|++++++++|||+.||++|++.+| +.|..+...+++++ .|++|+.+..+-.+...|...
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~-~A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAG---LGVAMGNAIDEVKE-AAQAVTLTNAENGVAAAIRKY 268 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHST---EECBC---CCHHHH-HCSCBC------CHHHHHC--
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcC---ceeeccCCCHHHHH-hcceeccCCCccHHHHHHHHH
Confidence 3455899999999999999999999999999999999999 66777765666655 589999988888778777654
No 434
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.09 E-value=1.6e-10 Score=112.02 Aligned_cols=72 Identities=22% Similarity=0.257 Sum_probs=61.3
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
+||+|||+||++||++|+.+.|.|.+++++|. ++.++.|.++ + . .+.|
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~-----~----------------------~---~~~~ 76 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVN-----S----------------------C---IEHY 76 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCS-----S----------------------S---CSSC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhh-----c----------------------C---cccC
Confidence 46899999999999999999999999999985 4888888542 1 0 1579
Q ss_pred CCCceeEEEEECCCCcEEEEecCCC
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEG 556 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~ 556 (1089)
+|.++||++++. +|+++.++.|..
T Consensus 77 ~i~~~Pt~~~~~-~G~~v~~~~G~~ 100 (135)
T 2dbc_A 77 HDNCLPTIFVYK-NGQIEGKFIGII 100 (135)
T ss_dssp CSSCCSEEEEES-SSSCSEEEESTT
T ss_pred CCCCCCEEEEEE-CCEEEEEEEeEE
Confidence 999999999995 999999988875
No 435
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.09 E-value=4.8e-09 Score=123.71 Aligned_cols=249 Identities=11% Similarity=0.086 Sum_probs=164.8
Q ss_pred EEEEeCCCCEEEEEe-CCCCEEEEEecCCC---CCC-----------------------CCC--CCCccccCCcceeEEe
Q 001380 615 LFISDSNHNRIVVTD-LDGNFIVQIGSSGE---EGL-----------------------RDG--SFDDATFNRPQGLAYN 665 (1089)
Q Consensus 615 L~vsd~~~~~I~~~~-~~g~~~~~i~~~g~---~g~-----------------------~dG--~~~~~~f~~P~gla~d 665 (1089)
.|+|...++.+.++- ++++.+.+|+-... .|+ .+| .+..+- .|+ ++++
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd--~hh-~~~s 93 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGD--LHH-VHMS 93 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCC--BCC-EEEE
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCC--CCc-cccC
Confidence 445555567777774 57888888766421 222 012 121122 233 6666
Q ss_pred e-----CCCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEE-e-cCCCEEEEEE----
Q 001380 666 A-----KKNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY-K-PINEKVYIAM---- 734 (1089)
Q Consensus 666 ~-----~g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~-~-~~g~~lyvad---- 734 (1089)
. +|+++||+|..+++|.+||+++.++..+..... -..|+++++ + |+++++|++.
T Consensus 94 ~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~---------------g~~phg~~~~~~p~~~~v~~~~~~~~ 158 (595)
T 1fwx_A 94 FTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPN---------------AKGIHGLRPQKWPRSNYVFCNGEDET 158 (595)
T ss_dssp EETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSS---------------CCSEEEEEECCSSBCSEEEEEECSCE
T ss_pred CCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC---------------CCCCcceeeeecCCCcEEEEeccccc
Confidence 6 789999999999999999999987655432110 126999998 5 8999999995
Q ss_pred -------------CCCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCC------
Q 001380 735 -------------AGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESS------ 795 (1089)
Q Consensus 735 -------------~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~------ 795 (1089)
...+.+..+|.++.++..-...+ .+|.+++++++|+++|++...+.
T Consensus 159 p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg---------------g~pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 159 PLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS---------------GNLDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp ESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES---------------SCCCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred ccCCCCcccccccccCceEEEEECCCCeEEEEEEeC---------------CCccceEECCCCCEEEEEecCcccCcchh
Confidence 33457888998887654332111 16899999999999999998773
Q ss_pred --------eEEEEEcCC-------------CCeEEEecCCCCCCCCccccCCCCCcc---ccccccCceEEEEccCCc-E
Q 001380 796 --------SIRALNLKT-------------GGSRLLAGGDPIFPDNLFKFGDRDGMG---SEVLLQHPLGVYCAKNGQ-I 850 (1089)
Q Consensus 796 --------~I~~~~~~~-------------~~~~~~~g~~~~~~~~l~~~g~~dg~~---~~~~l~~P~gva~~~~G~-l 850 (1089)
.|.+++... +.+.++-+.. ..+.. .-.--..|.|+.++|||+ +
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~------------~~~~~~~~~Ipvg~~PhGv~~sPDGk~v 291 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK------------EASSLFTRYIPIANNPHGCNMAPDKKHL 291 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG------------GGCCSSEEEEEEESSCCCEEECTTSSEE
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc------------cCCceeEEEEecCCCceEEEEcCCCCEE
Confidence 344444221 1122221100 00000 000114799999999995 9
Q ss_pred EEEeCCCCEEEEEeCCCCe------------EEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEE
Q 001380 851 YVADSYNHKIKKLDPASNR------------VSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918 (1089)
Q Consensus 851 yVaD~~n~~I~~~d~~~~~------------v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~ 918 (1089)
||++...++|.+||.++.. +..-...| ..|.+++++++|++|++...++.|.++
T Consensus 292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG--------------~gP~h~aF~~dG~aY~t~~ldsqV~kw 357 (595)
T 1fwx_A 292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG--------------LGPLHTAFDGRGNAYTSLFLDSQVVKW 357 (595)
T ss_dssp EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC--------------SCEEEEEECTTSEEEEEETTTTEEEEE
T ss_pred EEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC--------------CCcceEEECCCCeEEEEEecCCcEEEE
Confidence 9999999999999987542 11111111 349999999999999999999999999
Q ss_pred eCCC
Q 001380 919 DLNK 922 (1089)
Q Consensus 919 ~~~~ 922 (1089)
+.+.
T Consensus 358 di~~ 361 (595)
T 1fwx_A 358 NIED 361 (595)
T ss_dssp EHHH
T ss_pred EhhH
Confidence 9876
No 436
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.68 E-value=9.7e-12 Score=114.56 Aligned_cols=88 Identities=30% Similarity=0.550 Sum_probs=75.7
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.+|++||.||++||++|+.+.|.++++.+++++ ++.++.|++ |.+.++++.|
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~---------------------------~~~~~~~~~~ 69 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNV---------------------------DENPNTAAQY 69 (106)
Confidence 578999999999999999999999999999875 477777743 3345788999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
++.++|+++++ ++|+++.++.|..+.+.+.++|+++
T Consensus 70 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 70 GIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 99999999999 8999999999988888888887654
No 437
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.08 E-value=7.7e-11 Score=114.96 Aligned_cols=87 Identities=16% Similarity=0.127 Sum_probs=67.3
Q ss_pred CEEEEEEecCC--CcchhhhhhhHHHHHHHcCCCCEE--EEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 454 KVVVLDFWTYC--CINCMHVLPDLEFLEKKYKDMPFT--VVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 454 k~vll~Fwa~w--C~~C~~~~p~l~~l~~~~~~~~v~--vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
+.+||+||++| |++|+.+.|.|.+++++| + ++. ++.|.+ |.+.++++
T Consensus 35 ~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~---------------------------d~~~~la~ 85 (142)
T 2es7_A 35 GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADL---------------------------EQSEAIGD 85 (142)
T ss_dssp CSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECH---------------------------HHHHHHHH
T ss_pred CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEEC---------------------------CCCHHHHH
Confidence 45788999887 999999999999999999 4 466 888843 33457999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
+|+|.++||++++ ++|+++.++.|..+.+.+.++|++.++
T Consensus 86 ~~~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 86 RFNVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp TTTCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC
T ss_pred hcCCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9999999999999 999999999999888999999988775
No 438
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.08 E-value=4.3e-08 Score=110.37 Aligned_cols=262 Identities=13% Similarity=0.129 Sum_probs=171.1
Q ss_pred CCCceEEEeecCCeEEEEeCCC-----CEEEEEeCC---------CCEEEEEecCCCCCCCCCCCCccccCCcceeEEee
Q 001380 601 KFPGKLAIDILNNRLFISDSNH-----NRIVVTDLD---------GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNA 666 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~~-----~~I~~~~~~---------g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~ 666 (1089)
..|.||++|..+|++||+-..- -++.+++.+ +..+..+... + ....|.+.+++.+|+
T Consensus 26 ~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w-------~--~~~~lvsV~~v~iD~ 96 (381)
T 3q6k_A 26 MISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGH-------K--TGKELTSIYQPVIDD 96 (381)
T ss_dssp CCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTC-------S--SSCSSSCEEEEEECT
T ss_pred cceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCC-------c--cccceEEeeEEEEcC
Confidence 4689999963489999996531 245555432 1221332221 0 123588999999998
Q ss_pred CCCEEEEEECCC---------------CEEEEEECCCC--e-EEEEecCCCCCCCCCCCCcccccccCCceeEEEe---c
Q 001380 667 KKNLLYVADTEN---------------HALREIDFVND--T-VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYK---P 725 (1089)
Q Consensus 667 ~g~~lyVaD~~n---------------~~I~~~d~~~g--~-v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~---~ 725 (1089)
.|. |||.|++. -+|..||+.++ + ++++. ..... ...-+...+|++| +
T Consensus 97 ~~r-LWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~-~p~~~----------~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 97 CRR-LWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYY-FPTRL----------VEKPTYFGGFAVDVANP 164 (381)
T ss_dssp TCE-EEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEE-CCGGG----------CCCGGGEEEEEEEESCT
T ss_pred CCc-EEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEE-CCHHh----------cccCCccceEEEecccC
Confidence 776 99999872 17899999987 4 44443 11100 0012467899999 2
Q ss_pred C----CCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccCCCCCCC-Ccc---ccCCceEEEcCC----CCEEEEEeCC
Q 001380 726 I----NEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSL-NTS---FAQPSGISLSPD----FMEIYVADSE 793 (1089)
Q Consensus 726 ~----g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~-~~~---~~~P~glav~~~----g~~lyvad~~ 793 (1089)
. ++.+||+|.+...|.+||..++...++..........+.... ... ...-.|||++++ ++.||+.-..
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 2 469999999999999999999988777632111100000000 011 135679999998 7899999998
Q ss_pred CCeEEEEEcC---CCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEc-cCCcEEEEeCCCCEEEEEeCCC--
Q 001380 794 SSSIRALNLK---TGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCA-KNGQIYVADSYNHKIKKLDPAS-- 867 (1089)
Q Consensus 794 ~~~I~~~~~~---~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~-~~G~lyVaD~~n~~I~~~d~~~-- 867 (1089)
+.+++++..+ .... ...+-..|.+. . .....+.++| .+|.||+++..++.|..+++++
T Consensus 245 s~~ly~V~T~~L~~~~~----------~~~v~~~G~kg-~-----~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~ 308 (381)
T 3q6k_A 245 AIKVYSVNTKELKQKGG----------KLNPELLGNRG-K-----YNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMP 308 (381)
T ss_dssp CSEEEEEEHHHHSSTTC----------CCCCEEEEECC-T-----TCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCS
T ss_pred CCcEEEEEHHHhhCcch----------hhceEEeeecC-C-----CCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCc
Confidence 8899999732 1110 01111223221 0 1234567887 7899999999999999999987
Q ss_pred ---CeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECC
Q 001380 868 ---NRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTN 911 (1089)
Q Consensus 868 ---~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~ 911 (1089)
+...+++-. ..|..|.++.++.+|.|||....
T Consensus 309 ~~~~n~~~l~~d------------~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 309 LRMKNTDVVYTS------------SRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp BCGGGEEEEEEC------------TTCCSEEEEEECTTSCEEEEECS
T ss_pred cccCceEEEEEC------------CCccccCeEEECCCCeEEEEECc
Confidence 345666532 26899999999999999998743
No 439
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.08 E-value=2.1e-11 Score=117.17 Aligned_cols=89 Identities=24% Similarity=0.395 Sum_probs=76.4
Q ss_pred cCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 451 LKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 451 ~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
.++|++||+||++||++|+.+.|.|.++.++++ ++.++.|++ |.+.++++.
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~---------------------------~~~~~~~~~ 84 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDV---------------------------DELKEVAEK 84 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCT---------------------------TTSGGGHHH
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEec---------------------------cchHHHHHH
Confidence 368999999999999999999999999999987 577888854 445689999
Q ss_pred hCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHH
Q 001380 531 LGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~ 570 (1089)
|+|.++|+++++ ++|+++.++.| .+.+.+.++|+++++
T Consensus 85 ~~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 85 YNVEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVG 122 (130)
T ss_dssp HTCCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTS
T ss_pred cCCCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHh
Confidence 999999998777 89999988888 477888888887664
No 440
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.07 E-value=1.7e-10 Score=108.46 Aligned_cols=71 Identities=21% Similarity=0.303 Sum_probs=61.0
Q ss_pred CCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHhC
Q 001380 453 GKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELG 532 (1089)
Q Consensus 453 gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~ 532 (1089)
+++|||+|||+||++|+.+.|.|.+|+++|++ +.++-|.+ |. .++.|+
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~---------------------------d~---~~~~~~ 70 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIV---------------------------NS---CIQHYH 70 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEG---------------------------GG---TSTTCC
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEh---------------------------HH---hHHHCC
Confidence 45999999999999999999999999999974 77888843 11 147899
Q ss_pred CCceeEEEEECCCCcEEEEecCCC
Q 001380 533 VNSWPTFAVVGPNGKLLAQLAGEG 556 (1089)
Q Consensus 533 v~~~Pt~~lid~~G~i~~~~~G~~ 556 (1089)
|.++||++++ ++|+.+.++.|..
T Consensus 71 v~~~PT~~~f-k~G~~v~~~~G~~ 93 (118)
T 3evi_A 71 DNCLPTIFVY-KNGQIEAKFIGII 93 (118)
T ss_dssp GGGCSEEEEE-ETTEEEEEEESTT
T ss_pred CCCCCEEEEE-ECCEEEEEEeChh
Confidence 9999999999 8999999988864
No 441
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.06 E-value=6.3e-08 Score=117.51 Aligned_cols=241 Identities=17% Similarity=0.258 Sum_probs=174.5
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEE
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALR 682 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~ 682 (1089)
..++++++ ++.++++-...+.|..++.++..+..+... -....+++++|+|+.|..+ ..++.|+
T Consensus 306 v~~~~~~~-~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~--------------~~~v~~~~~s~~g~~l~~~-~~dg~v~ 369 (577)
T 2ymu_A 306 VWGVAFSP-DGQTIASASDDKTVKLWNRNGQHLQTLTGH--------------SSSVWGVAFSPDGQTIASA-SDDKTVK 369 (577)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEECCC--------------SSCEEEEEECTTSSEEEEE-ETTSEEE
T ss_pred eEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeeEEEeCC--------------CCCEEEEEECCCCCEEEEE-eCCCEEE
Confidence 45688887 666777767778999999998877665433 1246789999999955554 4578899
Q ss_pred EEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccC
Q 001380 683 EIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL 762 (1089)
Q Consensus 683 ~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~ 762 (1089)
.++.++..+.++.+.. ....+++++|++..|..+ ...+.|..||..+..+..+.+..
T Consensus 370 ~~~~~~~~~~~~~~~~-----------------~~v~~~~~s~dg~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~----- 426 (577)
T 2ymu_A 370 LWNRNGQLLQTLTGHS-----------------SSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLTGHS----- 426 (577)
T ss_dssp EEETTCCEEEEEECCS-----------------SCEEEEEECTTSSCEEEE-ETTSEEEEECTTCCEEEEEECCS-----
T ss_pred EEcCCCCEEEEecCCC-----------------CCeEEEEECCCCCEEEEE-eCCCEEEEEeCCCCEEEEecCCC-----
Confidence 9998877777775422 246789999998655444 45678888987666666665422
Q ss_pred CCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEE
Q 001380 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842 (1089)
Q Consensus 763 ~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gv 842 (1089)
....+++++|+++. +++-+..+.|+.++.++.....+.+.. ....++
T Consensus 427 ----------~~v~~~~~s~d~~~-l~~~~~d~~v~~w~~~~~~~~~~~~~~----------------------~~v~~~ 473 (577)
T 2ymu_A 427 ----------SSVWGVAFSPDDQT-IASASDDKTVKLWNRNGQLLQTLTGHS----------------------SSVRGV 473 (577)
T ss_dssp ----------SCEEEEEECTTSSE-EEEEETTSEEEEEETTSCEEEEEECCS----------------------SCEEEE
T ss_pred ----------CCeEEEEECCCCCE-EEEEcCCCEEEEEECCCCEEEEEcCCC----------------------CCEEEE
Confidence 12458999999854 455556789999998755444443311 135689
Q ss_pred EEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCC
Q 001380 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 843 a~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~ 922 (1089)
+++++|+++++-..++.|+.+|..+..+.++.+. -.....|++.++|+++++-..++.|+.++..+
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h--------------~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH--------------SSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSCEEEEEECC--------------SSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred EEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCC--------------CCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 9999999888888889999999888777777653 23467899999998777777789999999876
Q ss_pred CCceEEEEe
Q 001380 923 EEPELQTLE 931 (1089)
Q Consensus 923 ~~~~~~~l~ 931 (1089)
+ .+.++.
T Consensus 540 ~--~~~~~~ 546 (577)
T 2ymu_A 540 Q--LLQTLT 546 (577)
T ss_dssp C--EEEEEE
T ss_pred C--EEEEEc
Confidence 5 555554
No 442
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.04 E-value=5e-10 Score=118.93 Aligned_cols=90 Identities=17% Similarity=0.083 Sum_probs=77.0
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC---CCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD---MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~---~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
.+++++|+||++||++|+.+.|.++++++++++ .++.++.|.+ |.+.+++
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~---------------------------~~~~~l~ 185 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEA---------------------------IEYPEWA 185 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEG---------------------------GGCHHHH
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEc---------------------------ccCHHHH
Confidence 456669999999999999999999999999872 3688888854 3456789
Q ss_pred HHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 529 RELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 529 ~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+.|+|.++|+++++ ++|+.+.++.|....+.+.++|++.+
T Consensus 186 ~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 186 DQYNVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHTTCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HhCCCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 99999999998877 79999999999999888988887765
No 443
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.04 E-value=1.9e-11 Score=112.83 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=64.9
Q ss_pred eeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecC
Q 001380 444 PLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523 (1089)
Q Consensus 444 ~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~ 523 (1089)
.+++ ++..+|++||+|||+||++|+.+.|.|.+++++++ .|.+.. ++. .+.
T Consensus 4 ~~~l-a~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~-----~~~------------------~~~ 54 (106)
T 3kp8_A 4 AVGL-AAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-----YVECSP-----NGP------------------GTP 54 (106)
T ss_dssp HHHH-HHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-----EEESCT-----TCT------------------TSC
T ss_pred hhHH-HHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-----EEEEec-----ccc------------------cch
Confidence 3455 66778999999999999999999999999987764 343321 000 024
Q ss_pred ChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHH
Q 001380 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLV 565 (1089)
Q Consensus 524 ~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l 565 (1089)
+.++++.|+|.++||+++ +|+. +.|..+.+.+.+++
T Consensus 55 ~~~l~~~~~V~~~PT~~i---~G~~---~~G~~~~~~l~~~~ 90 (106)
T 3kp8_A 55 QAQECTEAGITSYPTWII---NGRT---YTGVRSLEALAVAS 90 (106)
T ss_dssp CCHHHHHTTCCSSSEEEE---TTEE---EESCCCHHHHHHHH
T ss_pred hHHHHHHcCCeEeCEEEE---CCEE---ecCCCCHHHHHHHh
Confidence 678999999999999766 7764 67888877766654
No 444
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.04 E-value=5e-10 Score=96.63 Aligned_cols=74 Identities=18% Similarity=0.341 Sum_probs=61.6
Q ss_pred EEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHhCCCc
Q 001380 456 VVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELGVNS 535 (1089)
Q Consensus 456 vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~v~~ 535 (1089)
..|+||++||++|+.+.|.++++.++++. ++.++.| | +.+++++|+|.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v-----------------------------~-~~~~~~~~~v~~ 50 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKI-----------------------------K-EMDQILEAGLTA 50 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEE-----------------------------C-SHHHHHHHTCSS
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEe-----------------------------c-CHHHHHHCCCCc
Confidence 35899999999999999999999999875 4888887 2 457899999999
Q ss_pred eeEEEEECCCCcEEEEecCCC-chhhHHHHH
Q 001380 536 WPTFAVVGPNGKLLAQLAGEG-HRKDLDDLV 565 (1089)
Q Consensus 536 ~Pt~~lid~~G~i~~~~~G~~-~~~~l~~~l 565 (1089)
+|++++ +|+++.+ |.. +.+++.++|
T Consensus 51 ~Pt~~~---~G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 51 LPGLAV---DGELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp SSCEEE---TTEEEEC--SSCCCHHHHHHHC
T ss_pred CCEEEE---CCEEEEc--CCCCCHHHHHHHh
Confidence 999988 8988766 775 677776553
No 445
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=99.04 E-value=1.3e-10 Score=126.23 Aligned_cols=206 Identities=13% Similarity=0.174 Sum_probs=116.9
Q ss_pred CceEEEEecCCcccCCchHHHHHHHHHHHH---cCCCCCHHhHhhhcCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 001380 78 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAE---MGVEVTVEDFLPFMGTGEANFLGGVASVKGVKGFDSEAAKKRFFEIY 154 (1089)
Q Consensus 78 ~~k~ViFD~DGTL~d~~~~~~~a~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (1089)
++|+|+||+||||+++...+.....+++++ .|+.+.. ..|++.......+. ..+.... . .....+....
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~-----aTGR~~~~~~~~~~-~l~~~~~-i-~~nGa~i~~~ 73 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAI-----ATGRAPFMFEHVRK-QLGIDSF-V-SFNGQYVVFE 73 (258)
T ss_dssp CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEE-----ECSSCGGGSHHHHH-HHTCCCE-E-EGGGTEEEET
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEE-----ECCCChHHHHHHHH-hcCCCEE-E-ECCCCEEEEC
Confidence 468999999999999876555555444444 4654221 22333222221111 1111100 0 0000000000
Q ss_pred HHHhcCCCCCCCCccHHHHHHHHHhCCCeEEEEcCCC-h------HhHHHHHHHCCCC-----------CCCccEEEEcC
Q 001380 155 LDKYAKPNSGIGFPGALELINQCKSKGLKVAVASSAD-R------IKVDANLAAAGLP-----------VSMFDAIVSAD 216 (1089)
Q Consensus 155 ~~~~~~~~~~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~-~------~~~~~~l~~~gl~-----------~~~fd~i~~~~ 216 (1089)
.+.+.. .....+.+.++++.+++.|+.+.+.++.. . ......+...+.. ...++.++..+
T Consensus 74 ~~~i~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 151 (258)
T 2pq0_A 74 GNVLYK--QPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCR 151 (258)
T ss_dssp TEEEEE--CCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSC
T ss_pred CEEEEE--ecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECC
Confidence 000000 11345778888888888888888776543 0 1122233333211 01223333222
Q ss_pred -------------------------CccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCH
Q 001380 217 -------------------------AFENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSE 271 (1089)
Q Consensus 217 -------------------------~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~ 271 (1089)
-...+-.|...++.+++++|+++++|++|||+.||+.|++.+|+..+ .+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~va---m~na~ 228 (258)
T 2pq0_A 152 AEEEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVA---MGNAH 228 (258)
T ss_dssp HHHHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEE---ETTCC
T ss_pred HHHHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEE---eCCCc
Confidence 11234566788999999999999999999999999999999996433 35555
Q ss_pred HHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 272 ERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 272 ~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
+++++ .+++|+.+..+-.+...|..
T Consensus 229 ~~~k~-~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 229 EEVKR-VADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp HHHHH-TCSEEECCGGGTHHHHHHHH
T ss_pred HHHHH-hCCEEeCCCCcchHHHHHHH
Confidence 66665 59999999888767776654
No 446
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.03 E-value=5.6e-08 Score=113.21 Aligned_cols=224 Identities=16% Similarity=0.196 Sum_probs=154.2
Q ss_pred CEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC--CCEEEEEECCCCeEEEEecCCCC
Q 001380 623 NRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE--NHALREIDFVNDTVRTLAGNGTK 700 (1089)
Q Consensus 623 ~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~--n~~I~~~d~~~g~v~~~ag~g~~ 700 (1089)
++|.++|.+|.....+... . .....++++|+|+.|+.+... +..|+.+|+.++....+.+..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~-~-------------~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~-- 222 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS-P-------------QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP-- 222 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE-S-------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS--
T ss_pred ceEEEEcCCCCCCEEEeCC-C-------------CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC--
Confidence 6888888887655544332 1 145789999999977777654 369999999998887775321
Q ss_pred CCCCCCCCcccccccCCceeEEEecCCCEEEEEEC--CCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCceE
Q 001380 701 GSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA--GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPSGI 778 (1089)
Q Consensus 701 ~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~--~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~gl 778 (1089)
.....++|+|+|..|+++.. ++..|+.+|..++.+..+.+.. .....+
T Consensus 223 ---------------~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~---------------~~~~~~ 272 (415)
T 2hqs_A 223 ---------------RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR---------------SNNTEP 272 (415)
T ss_dssp ---------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCS---------------SCEEEE
T ss_pred ---------------CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCC---------------Ccccce
Confidence 14578999999988887654 3567999999988876654321 134678
Q ss_pred EEcCCCCEEEEEeCCC--CeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeC
Q 001380 779 SLSPDFMEIYVADSES--SSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADS 855 (1089)
Q Consensus 779 av~~~g~~lyvad~~~--~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~ 855 (1089)
+++|+|+.|+++.... .+|+.++..++....+... -.....++++++|+ |+++..
T Consensus 273 ~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~----------------------~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE----------------------GSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS----------------------SSEEEEEEECTTSSEEEEEEE
T ss_pred EECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC----------------------CCcccCeEECCCCCEEEEEEC
Confidence 9999998787776433 3788889887665433211 01245789999996 555544
Q ss_pred C--CCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECCCC--EEEEEeCCCCCceEEEE
Q 001380 856 Y--NHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNN--IIRYLDLNKEEPELQTL 930 (1089)
Q Consensus 856 ~--n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~--~I~~~~~~~~~~~~~~l 930 (1089)
. ...|+.+|..++.+..+... .....+++.++|+ |+++...++ .|..++++++ ....+
T Consensus 331 ~~g~~~i~~~d~~~~~~~~l~~~---------------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~--~~~~l 393 (415)
T 2hqs_A 331 NGGQQHIAKQDLATGGVQVLSST---------------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR--FKARL 393 (415)
T ss_dssp CSSCEEEEEEETTTCCEEECCCS---------------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC--CEEEC
T ss_pred cCCceEEEEEECCCCCEEEecCC---------------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC--cEEEe
Confidence 3 46899999998888765431 1467788999987 555544333 7889998876 34444
Q ss_pred e
Q 001380 931 E 931 (1089)
Q Consensus 931 ~ 931 (1089)
.
T Consensus 394 ~ 394 (415)
T 2hqs_A 394 P 394 (415)
T ss_dssp C
T ss_pred e
Confidence 3
No 447
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.03 E-value=6e-10 Score=119.88 Aligned_cols=95 Identities=17% Similarity=0.335 Sum_probs=78.0
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC--CCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD--MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~--~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
.+|++||+|||+||++|+.+.|.+.++++++++ .++.++.|+++. |.+.++++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~l~~ 83 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE-------------------------ETNSAVCR 83 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS-------------------------TTTHHHHH
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc-------------------------hhhHHHHH
Confidence 459999999999999999999999999999986 469999996521 34678999
Q ss_pred HhCCCceeEEEEECCC-----CcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 530 ELGVNSWPTFAVVGPN-----GKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~-----G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
.|+|.++|+++++++. |+.+ .+.| .+.+.+.++|...+....
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 84 DFNIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp HTTCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHTCT
T ss_pred HcCCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHhcc
Confidence 9999999999999863 4444 4555 588889999988887543
No 448
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.02 E-value=1.2e-07 Score=115.14 Aligned_cols=241 Identities=17% Similarity=0.285 Sum_probs=175.2
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEE
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALR 682 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~ 682 (1089)
...+++.+ +++.+++-...+.|..++.+++.+..+.+. .....+++++|+++.++. -..++.|+
T Consensus 265 v~~v~~~~-d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h--------------~~~v~~~~~~~~~~~l~t-~~~d~~i~ 328 (577)
T 2ymu_A 265 VNGVAFRP-DGQTIASASDDKTVKLWNRNGQLLQTLTGH--------------SSSVWGVAFSPDGQTIAS-ASDDKTVK 328 (577)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEECCC--------------SSCEEEEEECTTSSEEEE-EETTSCEE
T ss_pred EEEEEEcC-CCCEEEEEeCCCEEEEEeCCCcEEEEEecC--------------CCCeEEEEECCCCCEEEE-EeCCCeEE
Confidence 45678887 666677767778999999999888776543 124578999999995544 44678899
Q ss_pred EEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCccccC
Q 001380 683 EIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYERNL 762 (1089)
Q Consensus 683 ~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~~~~ 762 (1089)
.++.++..+.++.+.. ...+.++++|++..|..+ ...+.|..|+..+..+..+.+..
T Consensus 329 ~w~~~~~~~~~~~~~~-----------------~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~~~~~~~~~~~~~----- 385 (577)
T 2ymu_A 329 LWNRNGQHLQTLTGHS-----------------SSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLTGHS----- 385 (577)
T ss_dssp EEETTSCEEEEECCCS-----------------SCEEEEEECTTSSEEEEE-ETTSEEEEEETTCCEEEEEECCS-----
T ss_pred EEeCCCCeeEEEeCCC-----------------CCEEEEEECCCCCEEEEE-eCCCEEEEEcCCCCEEEEecCCC-----
Confidence 9999888887775322 256789999998665554 45678888887766666665321
Q ss_pred CCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEE
Q 001380 763 NGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGV 842 (1089)
Q Consensus 763 ~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gv 842 (1089)
....+|+++++|+.|. +-+..+.|+.++.++.....+.+.. ....++
T Consensus 386 ----------~~v~~~~~s~dg~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~----------------------~~v~~~ 432 (577)
T 2ymu_A 386 ----------SSVRGVAFSPDGQTIA-SASDDKTVKLWNRNGQLLQTLTGHS----------------------SSVWGV 432 (577)
T ss_dssp ----------SCEEEEEECTTSSCEE-EEETTSEEEEECTTCCEEEEEECCS----------------------SCEEEE
T ss_pred ----------CCeEEEEECCCCCEEE-EEeCCCEEEEEeCCCCEEEEecCCC----------------------CCeEEE
Confidence 2356899999995554 4456688999987654444443311 124678
Q ss_pred EEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEeCCC
Q 001380 843 YCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLDLNK 922 (1089)
Q Consensus 843 a~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~~~~ 922 (1089)
+++++++.+++-..++.|+.+|..+..+.++.+. -.....+++.++|+++++-..++.|+.++..+
T Consensus 433 ~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~--------------~~~v~~~~~spd~~~las~~~d~~i~iw~~~~ 498 (577)
T 2ymu_A 433 AFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGH--------------SSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 498 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCEEEEEECC--------------SSCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCC--------------CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC
Confidence 9999998888888889999999888777777643 23467899999999888888889999999877
Q ss_pred CCceEEEEe
Q 001380 923 EEPELQTLE 931 (1089)
Q Consensus 923 ~~~~~~~l~ 931 (1089)
. .+.++.
T Consensus 499 ~--~~~~~~ 505 (577)
T 2ymu_A 499 Q--LLQTLT 505 (577)
T ss_dssp C--EEEEEE
T ss_pred C--EEEEEe
Confidence 5 555554
No 449
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=99.02 E-value=2.9e-11 Score=131.64 Aligned_cols=127 Identities=9% Similarity=0.074 Sum_probs=88.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCCh------HhHH-HHHHHCCC-C-----------CCCccEEEEcCC---------
Q 001380 166 GFPGALELINQCKSKGLKVAVASSADR------IKVD-ANLAAAGL-P-----------VSMFDAIVSADA--------- 217 (1089)
Q Consensus 166 ~~pG~~~lL~~Lk~~Gi~vaIvSn~~~------~~~~-~~l~~~gl-~-----------~~~fd~i~~~~~--------- 217 (1089)
..+++.++++.+++.|+++.+.++... .... ..++.+++ . ..+++.++..++
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 165 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPS 165 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHHh
Confidence 457888999999988888888876432 1122 22222332 0 134444443321
Q ss_pred ----------------ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcE
Q 001380 218 ----------------FENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSL 281 (1089)
Q Consensus 218 ----------------~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~ 281 (1089)
...++||+..++.+++++|++++++++|||+.||+.+++.+|+. |..+...++++ ..+++
T Consensus 166 ~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~---v~~~n~~~~~~-~~a~~ 241 (261)
T 2rbk_A 166 IPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG---VAMGQAKEDVK-AAADY 241 (261)
T ss_dssp STTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE---EECTTSCHHHH-HHSSE
T ss_pred cCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCce---EEecCccHHHH-hhCCE
Confidence 44689999999999999999999999999999999999999974 33454444554 46899
Q ss_pred EecCcccCCHHHHHh
Q 001380 282 IRKEIGSVSLNDILT 296 (1089)
Q Consensus 282 vi~dl~el~i~~ll~ 296 (1089)
++.+..+-.+..+|.
T Consensus 242 v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 242 VTAPIDEDGISKAMK 256 (261)
T ss_dssp ECCCGGGTHHHHHHH
T ss_pred EeccCchhhHHHHHH
Confidence 999998833355554
No 450
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.02 E-value=8.3e-10 Score=117.24 Aligned_cols=125 Identities=14% Similarity=0.141 Sum_probs=92.9
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHhHHHHHHHCCCCCCC-c----cEEEE--cCC-----------------------
Q 001380 168 PGALELINQCKSKGLKVAVASSADRIKVDANLAAAGLPVSM-F----DAIVS--ADA----------------------- 217 (1089)
Q Consensus 168 pG~~~lL~~Lk~~Gi~vaIvSn~~~~~~~~~l~~~gl~~~~-f----d~i~~--~~~----------------------- 217 (1089)
+.+.+.|++|+++|++++++|++....+...++.+++. .+ + ..++. ...
T Consensus 25 ~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~-~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~ 103 (227)
T 1l6r_A 25 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN-GPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMR 103 (227)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC-SCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCB
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC-CeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCC
Confidence 45677888899999999999999999999999988885 31 1 00110 000
Q ss_pred --------------------------------------------ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 001380 218 --------------------------------------------FENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQ 253 (1089)
Q Consensus 218 --------------------------------------------~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~ 253 (1089)
...+.+|+..++.+++++|++++++++|||+.||+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~ 183 (227)
T 1l6r_A 104 SILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMP 183 (227)
T ss_dssp CCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHH
T ss_pred ccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHH
Confidence 123478889999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 254 AAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 254 aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
+++.+|+. +. .+...+++++ .+++++.+..+-.+.+++..
T Consensus 184 m~~~ag~~-va--~~n~~~~~k~-~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 184 MFQLPVRK-AC--PANATDNIKA-VSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp HHTSSSEE-EE--CTTSCHHHHH-HCSEECSCCTTHHHHHHHHH
T ss_pred HHHHcCce-EE--ecCchHHHHH-hCCEEecCCCCcHHHHHHHH
Confidence 99999964 33 3444455554 58999988776555655543
No 451
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.01 E-value=1.6e-10 Score=106.95 Aligned_cols=98 Identities=14% Similarity=0.035 Sum_probs=70.1
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcC-CCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHH
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLW 528 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~-~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~ 528 (1089)
+-+.+.+||+|||+||++|+.+.+.+...++... ...+.++-|.++ + +....++
T Consensus 15 ~~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~-----~--------------------~~~~~la 69 (116)
T 3dml_A 15 DDKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMR-----D--------------------PLPPGLE 69 (116)
T ss_dssp ----CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETT-----S--------------------CCCTTCB
T ss_pred cccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECC-----C--------------------CCchhHH
Confidence 3355789999999999999998765543322210 011344444331 0 1234678
Q ss_pred HHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 529 RELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 529 ~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
..|+|.++||+++++ +|+.+.+..|....+.+.++|+.++..+.
T Consensus 70 ~~~~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~~~~ 113 (116)
T 3dml_A 70 LARPVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIGQAE 113 (116)
T ss_dssp CSSCCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHhhcC
Confidence 889999999999997 99999999999999999999999887664
No 452
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=99.00 E-value=9.5e-10 Score=122.49 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=77.9
Q ss_pred CeEEEEcCCChHhHHHHHHHCC--CCCC-CccEEEEcCC----ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 001380 182 LKVAVASSADRIKVDANLAAAG--LPVS-MFDAIVSADA----FENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQA 254 (1089)
Q Consensus 182 i~vaIvSn~~~~~~~~~l~~~g--l~~~-~fd~i~~~~~----~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~a 254 (1089)
+++.+.+. .+..+.+++.+. +. . .++.+.+... ...+.+|+..++.+++++|++++++++|||+.||++|
T Consensus 183 ~ki~~~~~--~~~~~~~~~~l~~~~~-~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m 259 (304)
T 3l7y_A 183 FKLTLQVK--EEESAQIMKAIADYKT-SQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEM 259 (304)
T ss_dssp EEEEEECC--GGGHHHHHHHHHTSTT-TTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH
T ss_pred EEEEEEcC--HHHHHHHHHHHHHhcC-CCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHH
Confidence 35555553 344555555543 32 3 4666655432 3456778899999999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 255 AKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 255 A~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
++.+| +.|..+...+++++ .|++|+.+..+-.+.+.|.
T Consensus 260 ~~~ag---~~vam~na~~~~k~-~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 260 LKLAK---YSYAMANAPKNVKA-AANYQAKSNDESGVLDVID 297 (304)
T ss_dssp HHHCT---EEEECTTSCHHHHH-HCSEECCCGGGTHHHHHHH
T ss_pred HHhcC---CeEEcCCcCHHHHH-hccEEcCCCCcchHHHHHH
Confidence 99999 56667766666665 5899999988765555554
No 453
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.99 E-value=1.3e-08 Score=119.08 Aligned_cols=287 Identities=15% Similarity=0.147 Sum_probs=153.5
Q ss_pred CCCCCCCCCceEEEeecC-CeEEEEeCCCCEEEEEeCCCCEEE-EEecCCCCCCCCCCCCccccCCcceeEEeeC---CC
Q 001380 595 LFTSPLKFPGKLAIDILN-NRLFISDSNHNRIVVTDLDGNFIV-QIGSSGEEGLRDGSFDDATFNRPQGLAYNAK---KN 669 (1089)
Q Consensus 595 ~~~~~l~~P~~vavd~~~-g~L~vsd~~~~~I~~~~~~g~~~~-~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~---g~ 669 (1089)
.+++.|..|++|++.|.+ ++|||++. .++|.+++.+|.... .+... ..-+.+|.. ......+.|||++|+ +.
T Consensus 8 ~va~gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~-~~~~~~g~~-~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 8 EVVSGLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDI-HKLVQSGIK-GGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEEC-TTTBCCCCS-SSCCCSEEEEEECTTHHHHC
T ss_pred EeccCCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCC-cceeccCcc-ccCCCcceeeEeCCCCcCCC
Confidence 456789999999999843 26999998 589999988765311 11110 001111100 001235689999985 34
Q ss_pred EEEEEECCC------------CEEEEEECCCC--------eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCE
Q 001380 670 LLYVADTEN------------HALREIDFVND--------TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEK 729 (1089)
Q Consensus 670 ~lyVaD~~n------------~~I~~~d~~~g--------~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~ 729 (1089)
.|||+-+.. .+|.++.++.+ ..+++....... .-.+...|+|+|+| .
T Consensus 85 ~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~------------~~H~g~~l~fgpDG-~ 151 (463)
T 2wg3_C 85 KLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH------------RKHLGGQLLFGPDG-F 151 (463)
T ss_dssp EEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS------------SSSCEEEEEECTTS-C
T ss_pred EEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC------------CcccCCcEeECCCC-c
Confidence 599985421 37877876531 122222111000 11355679999988 9
Q ss_pred EEEEECCC-----------------cEEEEEECCCCeEEEEeCCCccccCCCC---------CCCCccccCCceEEEcCC
Q 001380 730 VYIAMAGQ-----------------HQIWEHSTVDGVTRAFSGDGYERNLNGS---------SSLNTSFAQPSGISLSPD 783 (1089)
Q Consensus 730 lyvad~~~-----------------~~I~~~~~~~g~~~~~~g~g~~~~~~g~---------~~~~~~~~~P~glav~~~ 783 (1089)
|||+.... +.|+++++++... +..+....+++ .-...++.+|.|+++++.
T Consensus 152 LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~----~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~ 227 (463)
T 2wg3_C 152 LYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMC----NVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRH 227 (463)
T ss_dssp EEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCS----SCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESS
T ss_pred EEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcc----cccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCC
Confidence 99985432 3466666554210 00001111111 112356889999999997
Q ss_pred CC------EEEEEeCCCCeEEEEEcCCCCeEEE-ecCCCCCCCCccccCCCCCccccccccCceEEEEcc-------CCc
Q 001380 784 FM------EIYVADSESSSIRALNLKTGGSRLL-AGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAK-------NGQ 849 (1089)
Q Consensus 784 g~------~lyvad~~~~~I~~~~~~~~~~~~~-~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~-------~G~ 849 (1089)
.+ ++|++|...... ....+..+ .|+...+...++.++...+ ..|.|+++-. .|.
T Consensus 228 tg~~~G~l~~~~~D~~G~~~-----~~~ei~~i~~G~~yG~~~P~~~~~~~~g-------~Ap~G~~~Y~G~~fP~~~g~ 295 (463)
T 2wg3_C 228 PTDININLTILCSDSNGKNR-----SSARILQIIKGKDYESEPSLLEFKPFSN-------GPLVGGFVYRGCQSERLYGS 295 (463)
T ss_dssp CSSTTCSEEEEEECC-----------CEEEEEEC----CCSCCCCEECCC-----------CEEEEEECCCSSCTTTTTC
T ss_pred CCCcccceEEEecccCCCCC-----CCCeEeeeccCCCCCCCCCeEEeeCCCC-------ccccceEEEeCCCChhhcce
Confidence 32 678888521100 00111111 2222222233444443211 3578888832 456
Q ss_pred EEEEeCCCCEEEEEeCCCC----eEEEE-eccCCCCCCCCcccccccCCCceEEEccCCcEEEEEC-------CCCEEEE
Q 001380 850 IYVADSYNHKIKKLDPASN----RVSTL-AGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT-------NNNIIRY 917 (1089)
Q Consensus 850 lyVaD~~n~~I~~~d~~~~----~v~t~-~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~-------~n~~I~~ 917 (1089)
++++|.. ++|.++..+.+ ....+ .+. ..... ......|.+++++++|.|||++. .+++|.+
T Consensus 296 ~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~--~~~~~----~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~R 368 (463)
T 2wg3_C 296 YVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGT--SGSCR----GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYK 368 (463)
T ss_dssp EEEEETT-SCEEEEEC-----CCEEEEECEEE--TTSSC----SCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEE
T ss_pred EEEecCC-CcEEEEEeCCCCceeeEEEeecCC--ccccc----ccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEE
Confidence 9999986 78888865432 11122 111 00000 11245799999999999999997 4678888
Q ss_pred EeC
Q 001380 918 LDL 920 (1089)
Q Consensus 918 ~~~ 920 (1089)
+..
T Consensus 369 i~~ 371 (463)
T 2wg3_C 369 IVD 371 (463)
T ss_dssp EEC
T ss_pred ecC
Confidence 874
No 454
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.98 E-value=1.5e-09 Score=116.38 Aligned_cols=90 Identities=23% Similarity=0.262 Sum_probs=75.2
Q ss_pred ccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcC---CCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChh
Q 001380 450 DLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYK---DMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMN 526 (1089)
Q Consensus 450 ~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~---~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~ 526 (1089)
+++++++|++||++||++|+.+.|.|++++++++ +.++.+..|.+ +.+.+
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~---------------------------~~~~~ 187 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEA---------------------------YENPD 187 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEET---------------------------TTCHH
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEEC---------------------------ccCHH
Confidence 5678999999999999999999999999999983 24688888854 34567
Q ss_pred HHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHH
Q 001380 527 LWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLF 571 (1089)
Q Consensus 527 l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~ 571 (1089)
+++.|+|.++|++++ +|+++ +.|..+.+++.++|.+.+..
T Consensus 188 ~~~~~~V~~vPt~~i---~G~~~--~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 188 IADKYGVMSVPSIAI---NGYLV--FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHTTCCSSSEEEE---TTEEE--EESCCCHHHHHHHHHHHHTT
T ss_pred HHHHcCCeeeCeEEE---CCEEE--EeCCCCHHHHHHHHHHHhhc
Confidence 889999999999988 78875 77888888888888877753
No 455
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.97 E-value=5.6e-07 Score=100.72 Aligned_cols=231 Identities=17% Similarity=0.203 Sum_probs=162.2
Q ss_pred eEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEE
Q 001380 605 KLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALRE 683 (1089)
Q Consensus 605 ~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~ 683 (1089)
.+++.+ ++.++++-...+.|.++|.. |+.+..+... . .....++++|+|+ .+++...++.|+.
T Consensus 85 ~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~-~-------------~~~~~~~~spdg~-~l~~g~~dg~v~i 148 (321)
T 3ow8_A 85 SVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDAG-P-------------VDAWTLAFSPDSQ-YLATGTHVGKVNI 148 (321)
T ss_dssp EEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECC-T-------------TCCCCEEECTTSS-EEEEECTTSEEEE
T ss_pred EEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeCC-C-------------ccEEEEEECCCCC-EEEEEcCCCcEEE
Confidence 466776 66677777778999999986 6666665443 1 1346799999999 4555667889999
Q ss_pred EECCCCeEEE-EecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEE-EEeCCCcccc
Q 001380 684 IDFVNDTVRT-LAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR-AFSGDGYERN 761 (1089)
Q Consensus 684 ~d~~~g~v~~-~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~-~~~g~g~~~~ 761 (1089)
++..++.... +...+ .....++++|+++.|..+ ...+.|..||..++... .+.+..
T Consensus 149 ~~~~~~~~~~~~~~~~-----------------~~v~~~~~spdg~~lasg-~~dg~i~iwd~~~~~~~~~~~~h~---- 206 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRG-----------------KFILSIAYSPDGKYLASG-AIDGIINIFDIATGKLLHTLEGHA---- 206 (321)
T ss_dssp EETTTCSEEEEEECSS-----------------SCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCS----
T ss_pred EEcCCCceeEEecCCC-----------------ceEEEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEcccC----
Confidence 9988765433 32211 245789999998655544 45688999999887654 333211
Q ss_pred CCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE-EEecCCCCCCCCccccCCCCCccccccccCce
Q 001380 762 LNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR-LLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPL 840 (1089)
Q Consensus 762 ~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~-~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~ 840 (1089)
.....++++|++ .++++-+..+.|+.++..++... .+.+. -....
T Consensus 207 -----------~~v~~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~h----------------------~~~v~ 252 (321)
T 3ow8_A 207 -----------MPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGH----------------------ASWVL 252 (321)
T ss_dssp -----------SCCCEEEECTTS-CEEEEECTTSCEEEEETTTCCEEEEECCC----------------------SSCEE
T ss_pred -----------CceeEEEEcCCC-CEEEEEcCCCeEEEEECCCcceeEEEcCC----------------------CCceE
Confidence 134689999998 55666677889999998865543 22211 12356
Q ss_pred EEEEccCCcEEEEeCCCCEEEEEeCCCCeEE-EEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEEe
Q 001380 841 GVYCAKNGQIYVADSYNHKIKKLDPASNRVS-TLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYLD 919 (1089)
Q Consensus 841 gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~-t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~~ 919 (1089)
.++++++|..+++-+..+.|+.+|..++.+. ++.+. -....++++.++|+.+++-..++.|+.++
T Consensus 253 ~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h--------------~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 253 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH--------------QDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC--------------SSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC--------------CCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 8999999998888888999999998876643 34321 13367899999998888888889999887
Q ss_pred CC
Q 001380 920 LN 921 (1089)
Q Consensus 920 ~~ 921 (1089)
..
T Consensus 319 ~p 320 (321)
T 3ow8_A 319 CP 320 (321)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 456
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.96 E-value=2e-10 Score=125.82 Aligned_cols=113 Identities=10% Similarity=0.099 Sum_probs=82.5
Q ss_pred HhCCCeEEEEcCCChHhHHHHHHHCC--CCCCCccEEEEc----CCccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 001380 178 KSKGLKVAVASSADRIKVDANLAAAG--LPVSMFDAIVSA----DAFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251 (1089)
Q Consensus 178 k~~Gi~vaIvSn~~~~~~~~~l~~~g--l~~~~fd~i~~~----~~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~D 251 (1089)
++.+++++++++.. ....+++.+. +. ..|+.+.++ +....+++|+..++.+++++|++++++++|||+.||
T Consensus 143 ~~~~~ki~i~~~~~--~~~~~~~~l~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD 219 (271)
T 1rlm_A 143 DDVLFKFSLNLPDE--QIPLVIDKLHVALD-GIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGND 219 (271)
T ss_dssp CSCEEEEEEECCGG--GHHHHHHHHHHHTT-TSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred CCceEEEEEEcCHH--HHHHHHHHHHHHcC-CcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHH
Confidence 34567888888753 2455555443 43 457777665 334568999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 252 VQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 252 i~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
+.+++.+|+. |..+...+++++ .+++++.+..+-.+.++|..
T Consensus 220 ~~m~~~ag~~---va~~na~~~~k~-~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 220 AEMLKMARYS---FAMGNAAENIKQ-IARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp HHHHHHCSEE---EECTTCCHHHHH-HCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHcCCe---EEeCCccHHHHH-hCCeeCcCCCCChHHHHHHH
Confidence 9999999973 334444455554 58999998877555555543
No 457
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.96 E-value=1.3e-09 Score=129.19 Aligned_cols=97 Identities=16% Similarity=0.238 Sum_probs=83.6
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC--CCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD--MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~--~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
.+|++||+|||+||++|+.++|.+.++++++++ .++.++.|+++. |.+.++++
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~-------------------------d~~~~l~~ 83 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE-------------------------ETNSAVCR 83 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS-------------------------GGGHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc-------------------------cccHHHHH
Confidence 469999999999999999999999999999986 369999996520 34678999
Q ss_pred HhCCCceeEEEEECC---CCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 530 ELGVNSWPTFAVVGP---NGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~---~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
.|+|.++|+++++++ +|+.+....|..+.+.+.+.|.+.++...
T Consensus 84 ~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 84 EFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp HTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred HcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 999999999999987 78888888888899999999988886543
No 458
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.96 E-value=9.7e-10 Score=100.22 Aligned_cols=85 Identities=12% Similarity=0.067 Sum_probs=65.9
Q ss_pred CCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHhC
Q 001380 453 GKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRELG 532 (1089)
Q Consensus 453 gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~~ 532 (1089)
++++||+|+|+||++|+...|.++++.++ . ++.++-|.+ ++.+ +-.++++..||
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdV-----de~r------------------~~Sn~IA~~~~ 77 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIV-----QQER------------------DLSDYIAKKTN 77 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEG-----GGGH------------------HHHHHHHHHHT
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEe-----ecCc------------------hhhHHHHHHhC
Confidence 78999999999999999999999999885 3 355566643 1111 11246899999
Q ss_pred CCc-eeEEEEECCCCcEEEE-ecCCCchhhHHHH
Q 001380 533 VNS-WPTFAVVGPNGKLLAQ-LAGEGHRKDLDDL 564 (1089)
Q Consensus 533 v~~-~Pt~~lid~~G~i~~~-~~G~~~~~~l~~~ 564 (1089)
|++ .|+++++ ++|+++++ ..+..+.+.+.+.
T Consensus 78 V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 78 VKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp CCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHH
T ss_pred CccCCCeEEEE-ECCEEEEEeeccccCHHHHHHh
Confidence 995 9999999 99999998 5567777766554
No 459
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.95 E-value=1.5e-09 Score=103.21 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=69.6
Q ss_pred cCCCEEEEEEecC-------CCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecC
Q 001380 451 LKGKVVVLDFWTY-------CCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDG 523 (1089)
Q Consensus 451 ~~gk~vll~Fwa~-------wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~ 523 (1089)
.+||++||+||++ ||++|+.+.|.|.++++++++ ++.++.|.+. + ...| .|.
T Consensus 22 ~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~-----~-~~~~--------------~d~ 80 (123)
T 1wou_A 22 HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG-----E-KPYW--------------KDP 80 (123)
T ss_dssp TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC-----C-HHHH--------------HCT
T ss_pred hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC-----C-chhh--------------hch
Confidence 3589999999999 999999999999999999875 5999999652 1 1111 266
Q ss_pred ChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHH
Q 001380 524 DMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 524 ~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
+..+++.|+|.++|++++++..+++. ...| ...+.++++|+
T Consensus 81 ~~~~~~~~~i~~~Pt~~~~~~~~~~~-g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 81 NNDFRKNLKVTAVPTLLKYGTPQKLV-ESEC-LQANLVEMLFS 121 (123)
T ss_dssp TCHHHHHHCCCSSSEEEETTSSCEEE-GGGG-GCHHHHHHHHH
T ss_pred hHHHHHHCCCCeeCEEEEEcCCceEe-cccc-CCHHHHHHHHh
Confidence 77899999999999999997733332 2222 24555555554
No 460
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.94 E-value=3.8e-07 Score=101.64 Aligned_cols=234 Identities=11% Similarity=0.042 Sum_probs=160.2
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCCCCE---EEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCC
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDGNF---IVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTEN 678 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g~~---~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n 678 (1089)
....+++++ +++++++-...+.|.+++.+... ...+... -.....++++++++.++++. .+
T Consensus 99 ~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--------------~~~i~~~~~~~~~~~l~~~~-~d 162 (337)
T 1gxr_A 99 YIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS--------------APACYALAISPDSKVCFSCC-SD 162 (337)
T ss_dssp BEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECS--------------SSCEEEEEECTTSSEEEEEE-TT
T ss_pred cEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccC--------------CCceEEEEECCCCCEEEEEe-CC
Confidence 345688887 55555555567899999987433 2233222 12457899999999666665 56
Q ss_pred CEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCc
Q 001380 679 HALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGY 758 (1089)
Q Consensus 679 ~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~ 758 (1089)
+.|+.+|..++......... -.....++++|+++.|+++. ..+.|..||..++........
T Consensus 163 g~v~~~d~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~-- 223 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGH----------------TDGASCIDISNDGTKLWTGG-LDNTVRSWDLREGRQLQQHDF-- 223 (337)
T ss_dssp SCEEEEETTTTEEEEEECCC----------------SSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEEC--
T ss_pred CcEEEEeCCCCceeeeeecc----------------cCceEEEEECCCCCEEEEEe-cCCcEEEEECCCCceEeeecC--
Confidence 78999999887654433111 12568899999886666554 578899999988765443211
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccC
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~ 838 (1089)
-.....++++++++.|+++ ...+.|+.++..++....+.+. -..
T Consensus 224 -------------~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~~~~~~~~----------------------~~~ 267 (337)
T 1gxr_A 224 -------------TSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPDKYQLHLH----------------------ESC 267 (337)
T ss_dssp -------------SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSCEEEECCC----------------------SSC
T ss_pred -------------CCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCCeEEEcCC----------------------ccc
Confidence 1135689999999666555 4568899999987655433221 124
Q ss_pred ceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEEEE
Q 001380 839 PLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIRYL 918 (1089)
Q Consensus 839 P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~~~ 918 (1089)
..+++++++|+++++-..++.|+.+|..++........ -..+..+++.++|+.+++-..++.|+.+
T Consensus 268 v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE--------------SSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--------------SSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred eeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecC--------------CCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 67899999999888888889999999887766543321 2346788999999877777778888887
Q ss_pred eC
Q 001380 919 DL 920 (1089)
Q Consensus 919 ~~ 920 (1089)
++
T Consensus 334 ~~ 335 (337)
T 1gxr_A 334 EV 335 (337)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 461
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.2e-09 Score=120.90 Aligned_cols=91 Identities=18% Similarity=0.312 Sum_probs=75.1
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.++++||+|||+||++|+.+.|.+.++++++++. +.++.|.++ .+.+.++++.|
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d-------------------------~~~~~~l~~~~ 87 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCD-------------------------LNKNKALCAKY 87 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETT-------------------------STTTHHHHHHT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEcc-------------------------CccCHHHHHhC
Confidence 4789999999999999999999999999999865 788888652 02467899999
Q ss_pred CCCceeEEEEECCCCc-----------------EEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGK-----------------LLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~-----------------i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++|++++++. |+ ....+.|..+.+.+.+++...+
T Consensus 88 ~I~~~Pt~~~~~~-g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 88 DVNGFPTLMVFRP-PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp TCCBSSEEEEEEC-CCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred CCCccceEEEEEC-CceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 9999999999965 44 3567888888888888876543
No 462
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.94 E-value=7.3e-10 Score=120.93 Aligned_cols=77 Identities=16% Similarity=0.102 Sum_probs=65.4
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHhc
Q 001380 218 FENLKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILTG 297 (1089)
Q Consensus 218 ~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~~ 297 (1089)
...+.+|+..++.+++++|++++++++|||+.||++|++.+| +.|..+...+++++ .|++|+.+..+-.+...|..
T Consensus 189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag---~~vam~na~~~~k~-~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAG---IGVAMGNASEKVQS-VADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHH-TCSEECCCTTTTHHHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCC---CeEEeCCCcHHHHH-hcCEeeCCCCcCHHHHHHHH
Confidence 445778899999999999999999999999999999999999 56777776777776 49999999888777777654
Q ss_pred c
Q 001380 298 G 298 (1089)
Q Consensus 298 ~ 298 (1089)
+
T Consensus 265 ~ 265 (268)
T 3r4c_A 265 F 265 (268)
T ss_dssp T
T ss_pred h
Confidence 3
No 463
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.93 E-value=7.4e-10 Score=117.70 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=63.3
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
++++|||+||++||++|+.+.|.|.+|+++|++ +.++.|.+ + . ..++..|
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~-----d----------------------~-~~l~~~~ 181 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKA-----S----------------------N-TGAGDRF 181 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEH-----H----------------------H-HCCTTSS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeC-----C----------------------c-HHHHHHC
Confidence 589999999999999999999999999999974 88888843 1 1 2366789
Q ss_pred CCCceeEEEEECCCCcEEEEecCCC
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEG 556 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~ 556 (1089)
+|.++||++++ ++|+++.++.|..
T Consensus 182 ~I~~~PTll~~-~~G~~v~~~vG~~ 205 (245)
T 1a0r_P 182 SSDVLPTLLVY-KGGELLSNFISVT 205 (245)
T ss_dssp CTTTCSEEEEE-ETTEEEEEETTGG
T ss_pred CCCCCCEEEEE-ECCEEEEEEeCCc
Confidence 99999999998 5999999998864
No 464
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.93 E-value=1.6e-09 Score=124.63 Aligned_cols=91 Identities=18% Similarity=0.325 Sum_probs=78.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCC-----CCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKD-----MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMN 526 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~-----~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~ 526 (1089)
.++++||+|||+||++|+.+.|.+.++++++++ .++.++.|.+ +.+..
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~---------------------------~~~~~ 73 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDC---------------------------DQHSD 73 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEET---------------------------TTCHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEEC---------------------------CccHH
Confidence 579999999999999999999999999999853 3488888865 45678
Q ss_pred HHHHhCCCceeEEEEECCCCcEEEE-ecCCCchhhHHHHHHHHHH
Q 001380 527 LWRELGVNSWPTFAVVGPNGKLLAQ-LAGEGHRKDLDDLVEAALL 570 (1089)
Q Consensus 527 l~~~~~v~~~Pt~~lid~~G~i~~~-~~G~~~~~~l~~~l~~~l~ 570 (1089)
+++.|+|.++||++++ ++|+++.+ +.|..+.+.+.+++...+.
T Consensus 74 l~~~~~v~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 74 IAQRYRISKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKS 117 (382)
T ss_dssp HHHHTTCCEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHS
T ss_pred HHHhcCCCcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhcc
Confidence 9999999999999988 78998874 8899899999998887663
No 465
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.93 E-value=2.5e-09 Score=114.54 Aligned_cols=89 Identities=17% Similarity=0.435 Sum_probs=75.5
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCC--CEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM--PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWR 529 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~--~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~ 529 (1089)
.+++++|+||++||++|+.+.|.+.++++++++. ++.++.|.+ +.+.++++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~---------------------------~~~~~l~~ 198 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDA---------------------------TAETDLAK 198 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEET---------------------------TTCHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEEC---------------------------CCCHHHHH
Confidence 5789999999999999999999999999998753 478888854 44667999
Q ss_pred HhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 530 ELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 530 ~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
.|+|.++|++++++ +|+.+. +.|..+.+.+.++|.+.+
T Consensus 199 ~~~v~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 199 RFDVSGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp HTTCCSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHT
T ss_pred HcCCcccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhh
Confidence 99999999999995 688766 889888888888887654
No 466
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.92 E-value=6.8e-10 Score=116.49 Aligned_cols=76 Identities=16% Similarity=0.297 Sum_probs=64.9
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
+|++|||+||++||++|+.+.|.|.+++++|+ ++.++.|.+ + +..++..|
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~---------------------------~-~~~l~~~~ 168 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRA---------------------------S-NTGAGDRF 168 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEH---------------------------H-HHTCSTTS
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEEC---------------------------C-cHHHHHHC
Confidence 56999999999999999999999999999986 588888843 2 23467789
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCch
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHR 558 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~ 558 (1089)
+|.++||++++ ++|+++.++.|....
T Consensus 169 ~i~~~PTl~~~-~~G~~v~~~~G~~~~ 194 (217)
T 2trc_P 169 SSDVLPTLLVY-KGGELISNFISVAEQ 194 (217)
T ss_dssp CGGGCSEEEEE-ETTEEEEEETTGGGG
T ss_pred CCCCCCEEEEE-ECCEEEEEEeCCccc
Confidence 99999999999 699999999987653
No 467
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.91 E-value=1.5e-09 Score=123.52 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=75.1
Q ss_pred CCCEEEEEEecCCCcchhhhhhh-------HHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCC
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPD-------LEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGD 524 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~-------l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~ 524 (1089)
+++++||+|||+||+ |+.++|. +.++++++++.++.++.|.+ +.+
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~---------------------------~~~ 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDA---------------------------KKE 78 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEET---------------------------TTT
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeC---------------------------CCC
Confidence 579999999999999 9999999 89999998866799999965 456
Q ss_pred hhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHH
Q 001380 525 MNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAA 568 (1089)
Q Consensus 525 ~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~ 568 (1089)
.+++++|+|.++||++++ ++|+ ...+.|..+.+.+.+++...
T Consensus 79 ~~l~~~~~v~~~Pt~~~~-~~g~-~~~~~G~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 79 AKLAKKLGFDEEGSLYVL-KGDR-TIEFDGEFAADVLVEFLLDL 120 (350)
T ss_dssp HHHHHHHTCCSTTEEEEE-ETTE-EEEECSCCCHHHHHHHHHTT
T ss_pred HHHHHhcCCCccceEEEE-ECCc-EEEecCCCCHHHHHHHHHHh
Confidence 789999999999999999 7888 45789998888888877643
No 468
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.89 E-value=5.2e-06 Score=93.43 Aligned_cols=246 Identities=15% Similarity=0.181 Sum_probs=167.0
Q ss_pred CCCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCC
Q 001380 601 KFPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~ 679 (1089)
..-..+++++ +++++++-...+.|.+++.. ++.+..+... . .....++++|+|+.|..+ ..++
T Consensus 56 ~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~-~-------------~~v~~~~~s~~~~~l~s~-~~d~ 119 (340)
T 1got_B 56 AKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLR-S-------------SWVMTCAYAPSGNYVACG-GLDN 119 (340)
T ss_dssp SCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECS-S-------------SCEEEEEECTTSSEEEEE-ETTC
T ss_pred CceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecC-C-------------ccEEEEEECCCCCEEEEE-eCCC
Confidence 3445678887 67777777788999999975 6666665443 1 135788999999955444 4578
Q ss_pred EEEEEECCCCe-----EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEE-EE
Q 001380 680 ALREIDFVNDT-----VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR-AF 753 (1089)
Q Consensus 680 ~I~~~d~~~g~-----v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~-~~ 753 (1089)
.|+.++..++. ...+.+.. .....+++.+++ . +++....+.|..||..++... .+
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~-~-l~s~s~d~~i~~wd~~~~~~~~~~ 180 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHT-----------------GYLSCCRFLDDN-Q-IVTSSGDTTCALWDIETGQQTTTF 180 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCS-----------------SCEEEEEEEETT-E-EEEEETTSCEEEEETTTTEEEEEE
T ss_pred eEEEEECccCCCcceeEEEecCCC-----------------ccEEEEEECCCC-c-EEEEECCCcEEEEECCCCcEEEEE
Confidence 89999987542 22232211 244667888766 5 455566788999998887654 33
Q ss_pred eCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE-EEecCCCCCCCCccccCCCCCccc
Q 001380 754 SGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR-LLAGGDPIFPDNLFKFGDRDGMGS 832 (1089)
Q Consensus 754 ~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~-~~~g~~~~~~~~l~~~g~~dg~~~ 832 (1089)
.+. -.....+++++++ .++++-+..+.|+.++..++... .+.+.
T Consensus 181 ~~h---------------~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h------------------- 225 (340)
T 1got_B 181 TGH---------------TGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGH------------------- 225 (340)
T ss_dssp CCC---------------SSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCC-------------------
T ss_pred cCC---------------CCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCC-------------------
Confidence 321 1235689999998 67777778899999998866543 22111
Q ss_pred cccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCC
Q 001380 833 EVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNN 912 (1089)
Q Consensus 833 ~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n 912 (1089)
-....+++++|+|+.+++-+..+.|+.+|..++.......... .......+++.++|+++++...+
T Consensus 226 ---~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 226 ---ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN-----------IICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp ---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-----------CCSCEEEEEECTTSSEEEEEETT
T ss_pred ---cCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC-----------cccceEEEEECCCCCEEEEECCC
Confidence 1135689999999988888889999999987665433221100 11235678899999998988899
Q ss_pred CEEEEEeCCCCCceEEEEe
Q 001380 913 NIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 913 ~~I~~~~~~~~~~~~~~l~ 931 (1089)
+.|+.++..... .+.++.
T Consensus 292 ~~i~vwd~~~~~-~~~~~~ 309 (340)
T 1got_B 292 FNCNVWDALKAD-RAGVLA 309 (340)
T ss_dssp SEEEEEETTTCC-EEEEEE
T ss_pred CeEEEEEcccCc-EeeEee
Confidence 999999987652 344443
No 469
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.87 E-value=4e-09 Score=112.19 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=75.6
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.++++|++||++||++|+.+.|.++++++++. ++.++.|.+ +.+.++++.|
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~---------------------------~~~~~l~~~~ 185 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDA---------------------------SENQDLAEQF 185 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEG---------------------------GGCHHHHHHT
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEEC---------------------------CCCHHHHHHc
Confidence 45667899999999999999999999999984 588888854 3456799999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHhc
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFYG 573 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~~ 573 (1089)
+|.++|++++ +|+ +.++.|..+.+.+.++|...++..+
T Consensus 186 ~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~~~~~ 223 (229)
T 2ywm_A 186 QVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVYEKLK 223 (229)
T ss_dssp TCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHHHHHH
T ss_pred CCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHhhhhh
Confidence 9999999988 788 5668899999999999998887644
No 470
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.87 E-value=1.2e-06 Score=97.42 Aligned_cols=237 Identities=14% Similarity=0.114 Sum_probs=161.0
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCCC-C---EEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDG-N---FIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE 677 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g-~---~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~ 677 (1089)
....+++++ +++++++-. .+.|.+++.+. + .+..+...+. -.....++++++++.|+++. .
T Consensus 53 ~v~~~~~~~-~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~-~ 117 (337)
T 1gxr_A 53 VVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNR------------DNYIRSCKLLPDGCTLIVGG-E 117 (337)
T ss_dssp CCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCT------------TSBEEEEEECTTSSEEEEEE-S
T ss_pred ceEEEEEec-CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCC------------CCcEEEEEEcCCCCEEEEEc-C
Confidence 345788887 555555555 78999998763 2 1222221101 12467899999999666654 5
Q ss_pred CCEEEEEECCCCeEE---EEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEE-E
Q 001380 678 NHALREIDFVNDTVR---TLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRA-F 753 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~---~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~-~ 753 (1089)
++.|+.++..++... .+.+. -.....++++++++.++++. ..+.|..||..++.... +
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~-----------------~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSS-----------------APACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECS-----------------SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEE
T ss_pred CCcEEEEECCCCCcceeeecccC-----------------CCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceeeee
Confidence 788999999876522 22211 12467899999886666654 46789999988776543 3
Q ss_pred eCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcccc
Q 001380 754 SGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833 (1089)
Q Consensus 754 ~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~ 833 (1089)
.+. -.....++++++++.|+++ ...+.|+.++..++........
T Consensus 180 ~~~---------------~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~-------------------- 223 (337)
T 1gxr_A 180 QGH---------------TDGASCIDISNDGTKLWTG-GLDNTVRSWDLREGRQLQQHDF-------------------- 223 (337)
T ss_dssp CCC---------------SSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEEC--------------------
T ss_pred ecc---------------cCceEEEEECCCCCEEEEE-ecCCcEEEEECCCCceEeeecC--------------------
Confidence 211 1246789999998555554 4678999999886554322110
Q ss_pred ccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCC
Q 001380 834 VLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN 913 (1089)
Q Consensus 834 ~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~ 913 (1089)
-.....++++++|+.+++-..++.|+.+|..++....+.+. -.....+++.++|+++++-..++
T Consensus 224 --~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 224 --TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH--------------ESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp --SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCC--------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred --CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCC--------------ccceeEEEECCCCCEEEEecCCC
Confidence 11357789999998777777889999999988877665432 23477899999998888888899
Q ss_pred EEEEEeCCCC
Q 001380 914 IIRYLDLNKE 923 (1089)
Q Consensus 914 ~I~~~~~~~~ 923 (1089)
.|+.+++...
T Consensus 288 ~i~~~~~~~~ 297 (337)
T 1gxr_A 288 LLNAWRTPYG 297 (337)
T ss_dssp EEEEEETTTC
T ss_pred cEEEEECCCC
Confidence 9999999876
No 471
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.86 E-value=4.5e-07 Score=102.66 Aligned_cols=240 Identities=11% Similarity=0.081 Sum_probs=162.3
Q ss_pred ceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEe--cCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 604 GKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIG--SSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 604 ~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~--~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
..+++.+ +++|..+ ...+.|.++|.+ |+.+.... ..+. -.....|+++++|+.|+. -..++.
T Consensus 86 ~~~~~s~-d~~l~~~-s~dg~v~lWd~~~~~~~~~~~~~~~~H------------~~~V~~v~~spdg~~l~s-gs~d~~ 150 (344)
T 4gqb_B 86 ADLTWVG-ERGILVA-SDSGAVELWELDENETLIVSKFCKYEH------------DDIVSTVSVLSSGTQAVS-GSKDIC 150 (344)
T ss_dssp EEEEEET-TTEEEEE-ETTSEEEEEEECTTSSCEEEEEEEECC------------SSCEEEEEECTTSSEEEE-EETTSC
T ss_pred EEEEEeC-CCeEEEE-ECCCEEEEEeccCCCceeEeeccccCC------------CCCEEEEEECCCCCEEEE-EeCCCe
Confidence 4677886 6666544 557899999876 44332221 1111 123578999999995544 446788
Q ss_pred EEEEECCCCeEEE-EecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCcc
Q 001380 681 LREIDFVNDTVRT-LAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759 (1089)
Q Consensus 681 I~~~d~~~g~v~~-~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~ 759 (1089)
|+.+|..++.... +.+.. ...+.+++++++..++++....+.|..||..++.........
T Consensus 151 i~iwd~~~~~~~~~~~~h~-----------------~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-- 211 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHA-----------------AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS-- 211 (344)
T ss_dssp EEEEETTTTEEEEEECCCS-----------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----
T ss_pred EEEEECCCCcEEEEEcCcC-----------------CceEEEEecCCCCCceeeeccccccccccccccceeeeeecc--
Confidence 9999998876543 43211 245789999988778888777889999998876543221100
Q ss_pred ccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCe-EEEecCCCCCCCCccccCCCCCccccccccC
Q 001380 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838 (1089)
Q Consensus 760 ~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~-~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~ 838 (1089)
..-..+..++++++++.++++-+.++.|+.++..++.. ..+.+. -..
T Consensus 212 ----------~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h----------------------~~~ 259 (344)
T 4gqb_B 212 ----------APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH----------------------SQC 259 (344)
T ss_dssp ------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC----------------------SSC
T ss_pred ----------eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC----------------------CCC
Confidence 11123568899997778888888889999999876542 233221 113
Q ss_pred ceEEEEccCC-cEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEECCCCEEE
Q 001380 839 PLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIR 916 (1089)
Q Consensus 839 P~gva~~~~G-~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~ 916 (1089)
-.+|+++++| +++++-+..+.|+.+|..++.+.++.+. -....++++.++|. |+++-..+++|+
T Consensus 260 v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H--------------~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 260 VTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAH--------------RDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCC--------------SSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCC--------------CCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 4678999988 5667777889999999999887766432 23367889988774 777777789999
Q ss_pred EEeCCCC
Q 001380 917 YLDLNKE 923 (1089)
Q Consensus 917 ~~~~~~~ 923 (1089)
..++..+
T Consensus 326 ~w~v~~~ 332 (344)
T 4gqb_B 326 HHVVPTE 332 (344)
T ss_dssp EEECCC-
T ss_pred EEECCCC
Confidence 9988765
No 472
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.86 E-value=4.7e-09 Score=124.89 Aligned_cols=102 Identities=16% Similarity=0.246 Sum_probs=80.7
Q ss_pred CCCceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCC-CEEEEEEeCCCCCChhcHHHHHHHHHHcCCccc
Q 001380 440 LNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM-PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHP 518 (1089)
Q Consensus 440 ~~g~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~-~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1089)
++++.+.....-.+|+|||+|||+||++|+.++|.|.+++++|++. ++.++.|..
T Consensus 357 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~------------------------ 412 (481)
T 3f8u_A 357 VVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDA------------------------ 412 (481)
T ss_dssp ECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEET------------------------
T ss_pred ecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEEC------------------------
Confidence 3555543311224899999999999999999999999999999874 799988853
Q ss_pred eeecCChhHHHHhCCCceeEEEEECCCCcE-EEEecCCCchhhHHHHHHHHH
Q 001380 519 VVNDGDMNLWRELGVNSWPTFAVVGPNGKL-LAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 519 v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i-~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+. .++++.|+|.++||+++++++|++ ..++.|..+.+.+.++|++.+
T Consensus 413 ---~~-~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 460 (481)
T 3f8u_A 413 ---TA-NDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA 460 (481)
T ss_dssp ---TS-SCCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHC
T ss_pred ---Cc-hhhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhc
Confidence 11 257788999999999999888874 677889888888888877644
No 473
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.86 E-value=5.4e-07 Score=101.45 Aligned_cols=216 Identities=13% Similarity=0.157 Sum_probs=147.8
Q ss_pred CCCCCCCceEEEeecCCeEEEEeCCC---------------CEEEEEeCC-C--CEEEEEecCCCCCCCCCCCCccccCC
Q 001380 597 TSPLKFPGKLAIDILNNRLFISDSNH---------------NRIVVTDLD-G--NFIVQIGSSGEEGLRDGSFDDATFNR 658 (1089)
Q Consensus 597 ~~~l~~P~~vavd~~~g~L~vsd~~~---------------~~I~~~~~~-g--~~~~~i~~~g~~g~~dG~~~~~~f~~ 658 (1089)
...|....++.+|. .++|||.|+|. -+|+.+|+. + +.++++.-+... ..+. ..
T Consensus 83 ~~~lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~------~~~~--S~ 153 (381)
T 3q6k_A 83 GKELTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRL------VEKP--TY 153 (381)
T ss_dssp SCSSSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGG------CCCG--GG
T ss_pred ccceEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHh------cccC--Cc
Confidence 46789999999997 99999999872 269999987 5 678777654211 1111 24
Q ss_pred cceeEEe-e--C----CCEEEEEECCCCEEEEEECCCCeEEEEecCCCCCCCCCCC--Ccccc-cccCCceeEEEecC--
Q 001380 659 PQGLAYN-A--K----KNLLYVADTENHALREIDFVNDTVRTLAGNGTKGSDYQGG--EKGTS-QLLNSPWDVCYKPI-- 726 (1089)
Q Consensus 659 P~gla~d-~--~----g~~lyVaD~~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~--~~~~~-~~l~~P~~la~~~~-- 726 (1089)
-+.|++| . . +.++|++|.+...|.++|+.++...++....... +..+. ..+.. +....-.|||++|+
T Consensus 154 l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p-d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~ 232 (381)
T 3q6k_A 154 FGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA-ERPTKFDYGGKEYEFKAGIFGITLGDRDS 232 (381)
T ss_dssp EEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC-CSCEEEEETTEEEEECCCEEEEEECCCCT
T ss_pred cceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc-ccCcceEECCEEeEeccCceEEEecCCcC
Confidence 5789998 2 2 5679999999999999999999888876321111 10000 00111 11236678999998
Q ss_pred --CCEEEEEECCCcEEEEEECC---CC----eEEEEeCCCccccCCCCCCCCccccCCceEEEc-CCCCEEEEEeCCCCe
Q 001380 727 --NEKVYIAMAGQHQIWEHSTV---DG----VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLS-PDFMEIYVADSESSS 796 (1089)
Q Consensus 727 --g~~lyvad~~~~~I~~~~~~---~g----~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~-~~g~~lyvad~~~~~ 796 (1089)
+..||+.-..+..++.+..+ +. .++.+... ....+..++++| .+| .||+++.+.++
T Consensus 233 ~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~k-------------g~~s~~~~~~~D~~~G-~ly~~~~~~~a 298 (381)
T 3q6k_A 233 EGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNR-------------GKYNDAIALAYDPKTK-VIFFAEANTKQ 298 (381)
T ss_dssp TSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEEC-------------CTTCCEEEEEECTTTC-EEEEEESSSSE
T ss_pred CCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeec-------------CCCCCcceEEEeCCCC-eEEEEeccCCe
Confidence 78999999998899888631 11 11222110 011345578887 555 99999999999
Q ss_pred EEEEEcCC-----CCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCcEEEEeCC
Q 001380 797 IRALNLKT-----GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQIYVADSY 856 (1089)
Q Consensus 797 I~~~~~~~-----~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~lyVaD~~ 856 (1089)
|.++++++ +...+++. +.+|+.|.++.++.+|.|||....
T Consensus 299 I~~w~~~~~~~~~~n~~~l~~--------------------d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 299 VSCWNTQKMPLRMKNTDVVYT--------------------SSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEEEETTSCSBCGGGEEEEEE--------------------CTTCCSEEEEEECTTSCEEEEECS
T ss_pred EEEEeCCCCccccCceEEEEE--------------------CCCccccCeEEECCCCeEEEEECc
Confidence 99999875 22344432 125899999999999999998744
No 474
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.84 E-value=1.3e-08 Score=99.87 Aligned_cols=95 Identities=13% Similarity=0.163 Sum_probs=72.6
Q ss_pred CCCEEEEEEecCCCcchhhhh------hhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCCh
Q 001380 452 KGKVVVLDFWTYCCINCMHVL------PDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDM 525 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~------p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~ 525 (1089)
.+|+|||+|++.||.+|+.+. |.+.++.++ ++++|.+.++ + +...
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~----~fv~v~~d~~-----~--------------------~~~~ 91 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE----HFIFWQVYHD-----S--------------------EEGQ 91 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH----TEEEEEEESS-----S--------------------HHHH
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc----CeEEEEEecC-----C--------------------HhHH
Confidence 489999999999999999874 445544433 5888888541 1 1123
Q ss_pred hHHHHhCCCceeEEEEECCC-CcEEEEecCCCchhhHHHHHHHHHHHhcccc
Q 001380 526 NLWRELGVNSWPTFAVVGPN-GKLLAQLAGEGHRKDLDDLVEAALLFYGKKK 576 (1089)
Q Consensus 526 ~l~~~~~v~~~Pt~~lid~~-G~i~~~~~G~~~~~~l~~~l~~~l~~~~~~~ 576 (1089)
.+.+.|++.++|+++++|++ |+.+..+.| .+.+++.+.|+..++.++..+
T Consensus 92 ~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~~~~~ 142 (153)
T 2dlx_A 92 RYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEHGQLD 142 (153)
T ss_dssp HHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHHHTCSCS
T ss_pred HHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHHhcCCCC
Confidence 56678999999999999998 877777766 788999999988888776543
No 475
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.84 E-value=1.6e-08 Score=102.61 Aligned_cols=119 Identities=19% Similarity=0.312 Sum_probs=87.5
Q ss_pred ceeecccccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC------------------------
Q 001380 443 APLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD------------------------ 498 (1089)
Q Consensus 443 ~~~~l~~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~------------------------ 498 (1089)
....+ ....+|++|+.||.+|||+|+...|.|.++.+++++ +.++-++++-..
T Consensus 13 ~~~~~-G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~ 89 (175)
T 3gyk_A 13 NAPVL-GNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHW 89 (175)
T ss_dssp TSCEE-ECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHH
T ss_pred CCCCc-CCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHH
Confidence 34445 566789999999999999999999999999999875 555555443211
Q ss_pred ------ChhcHHHHHHHHHHcCCcccee------------ecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhh
Q 001380 499 ------NEKDLEAIRNAVLRYGISHPVV------------NDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKD 560 (1089)
Q Consensus 499 ------~~~~~~~~~~~~~~~~~~~~v~------------~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~ 560 (1089)
..-+.+.+.+++++.|++...+ .+.+.++++++||.++|++++ +|+ .+.|....+.
T Consensus 90 ~lf~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i---~g~---~~~G~~~~~~ 163 (175)
T 3gyk_A 90 ALMGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV---EDA---LVPGFVEQSQ 163 (175)
T ss_dssp HHHTCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE---TTE---EECSCCCHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE---CCE---EeeCCCCHHH
Confidence 0124556777778888875432 234567889999999998876 454 4568888999
Q ss_pred HHHHHHHHHH
Q 001380 561 LDDLVEAALL 570 (1089)
Q Consensus 561 l~~~l~~~l~ 570 (1089)
+.+.|+++++
T Consensus 164 l~~~i~~~l~ 173 (175)
T 3gyk_A 164 LQDAVDRARK 173 (175)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988775
No 476
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.84 E-value=5.9e-09 Score=124.77 Aligned_cols=90 Identities=12% Similarity=0.300 Sum_probs=79.7
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.++++||+|||+||++|+.+.|.+.++++++++.++.++.|.+ +.+..+++.|
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~---------------------------~~~~~l~~~~ 82 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDC---------------------------TENQDLCMEH 82 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEET---------------------------TTCHHHHHHT
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEEC---------------------------CCCHHHHHhc
Confidence 5799999999999999999999999999999876799999965 4567899999
Q ss_pred CCCceeEEEEECCCCcE--EEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKL--LAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i--~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++||++++ ++|+. ...+.|..+.+.+.+++...+
T Consensus 83 ~v~~~Pt~~~~-~~g~~~~~~~~~G~~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 83 NIPGFPSLKIF-KNSDVNNSIDYEGPRTAEAIVQFMIKQS 121 (504)
T ss_dssp TCCSSSEEEEE-ETTCTTCEEECCSCCSHHHHHHHHHHHT
T ss_pred CCCcCCEEEEE-eCCccccceeecCCCCHHHHHHHHHHhc
Confidence 99999999999 56776 778999989999988887765
No 477
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.83 E-value=2.5e-06 Score=95.32 Aligned_cols=238 Identities=15% Similarity=0.167 Sum_probs=158.7
Q ss_pred ceEEEeec---CCeEEEEeCCCCEEEEEeCCCCEE-EEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCC
Q 001380 604 GKLAIDIL---NNRLFISDSNHNRIVVTDLDGNFI-VQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679 (1089)
Q Consensus 604 ~~vavd~~---~g~L~vsd~~~~~I~~~~~~g~~~-~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~ 679 (1089)
..+++.+. ++.++++-...+.|.+++.+.... ......+. -..-..+++.+++. +.++-..++
T Consensus 36 ~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh------------~~~v~~~~~~~~~~-~l~s~s~D~ 102 (321)
T 3ow8_A 36 WSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGH------------QLGVVSVDISHTLP-IAASSSLDA 102 (321)
T ss_dssp EEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCC------------SSCEEEEEECSSSS-EEEEEETTS
T ss_pred EEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccC------------CCCEEEEEECCCCC-EEEEEeCCC
Confidence 45666542 456788888888999998764332 22111111 12346788888888 555656788
Q ss_pred EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEE-EEeCCCc
Q 001380 680 ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR-AFSGDGY 758 (1089)
Q Consensus 680 ~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~-~~~g~g~ 758 (1089)
.|+.+|+.++........+. ...+.++++|++..| ++....+.|..|+...+... .+.+.+
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~----------------~~~~~~~~spdg~~l-~~g~~dg~v~i~~~~~~~~~~~~~~~~- 164 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGP----------------VDAWTLAFSPDSQYL-ATGTHVGKVNIFGVESGKKEYSLDTRG- 164 (321)
T ss_dssp EEEEEETTTTEEEEEEECCT----------------TCCCCEEECTTSSEE-EEECTTSEEEEEETTTCSEEEEEECSS-
T ss_pred cEEEEECCCCCEEEEEeCCC----------------ccEEEEEECCCCCEE-EEEcCCCcEEEEEcCCCceeEEecCCC-
Confidence 99999998876443332111 145679999998554 45556788999998876543 333211
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEE-EecCCCCCCCCccccCCCCCcccccccc
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL-LAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~-~~g~~~~~~~~l~~~g~~dg~~~~~~l~ 837 (1089)
.....++++|+|+.| ++-+..+.|+.++..++.... +.+. -.
T Consensus 165 --------------~~v~~~~~spdg~~l-asg~~dg~i~iwd~~~~~~~~~~~~h----------------------~~ 207 (321)
T 3ow8_A 165 --------------KFILSIAYSPDGKYL-ASGAIDGIINIFDIATGKLLHTLEGH----------------------AM 207 (321)
T ss_dssp --------------SCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEECCC----------------------SS
T ss_pred --------------ceEEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEEEEEccc----------------------CC
Confidence 134689999999554 555567899999988665432 2111 01
Q ss_pred CceEEEEccCCcEEEEeCCCCEEEEEeCCCCeE-EEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEE
Q 001380 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRV-STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916 (1089)
Q Consensus 838 ~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v-~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~ 916 (1089)
....++++++|+++++-+..+.|+.+|..++.+ .++.+ .-.....+++.++|+.+++-..++.|+
T Consensus 208 ~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------------h~~~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 208 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG--------------HASWVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC--------------CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC--------------CCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 246789999999888888899999999876554 34432 123356889999998888888899999
Q ss_pred EEeCCCC
Q 001380 917 YLDLNKE 923 (1089)
Q Consensus 917 ~~~~~~~ 923 (1089)
.+++...
T Consensus 274 iwd~~~~ 280 (321)
T 3ow8_A 274 VWDVGTR 280 (321)
T ss_dssp EEETTTT
T ss_pred EEeCCCC
Confidence 9999876
No 478
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.81 E-value=6.5e-10 Score=122.64 Aligned_cols=115 Identities=13% Similarity=0.124 Sum_probs=78.6
Q ss_pred HhCCCeEEEEcCCChHhHHHHHHHCC--CCCCCccEEEEcC----CccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 001380 178 KSKGLKVAVASSADRIKVDANLAAAG--LPVSMFDAIVSAD----AFENLKPAPDIFLSASKILNVPTSECIVIEDALAG 251 (1089)
Q Consensus 178 k~~Gi~vaIvSn~~~~~~~~~l~~~g--l~~~~fd~i~~~~----~~~~~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~D 251 (1089)
...++..+++++...+....+.+.+. +. ..+..+.+.. -...+.+|+..++.+++++|++++++++|||+.||
T Consensus 159 ~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~ND 237 (285)
T 3pgv_A 159 DPQGISKVFFTCEDHEHLLPLEQAMNARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMND 237 (285)
T ss_dssp CCSSEEEEEEECSCHHHHHHHHHHHHHHHG-GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred CCCCceEEEEeCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhh
Confidence 34455556666555555544444332 11 2244444432 23456778999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCHHHHhhc-CCcEEecCcccCCHHHHHh
Q 001380 252 VQAAKAAQMRCIAVTTTLSEERLKEA-SPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 252 i~aA~~aG~~~i~V~~g~~~~~l~~~-~~d~vi~dl~el~i~~ll~ 296 (1089)
++|++.+| +.|..+...+++++. ...+++.+..+=.+...|.
T Consensus 238 i~ml~~ag---~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 238 AEMLSMAG---KGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp HHHHHHSS---EEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred HHHHHhcC---CEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 99999999 677777766777664 2236777777766666554
No 479
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.81 E-value=7.4e-09 Score=123.22 Aligned_cols=89 Identities=15% Similarity=0.352 Sum_probs=79.1
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHHh
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWREL 531 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~~ 531 (1089)
.++++||+|||+||++|+.+.|.+.++++++++. +.++.|.+ +.+..+++.|
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~---------------------------~~~~~l~~~~ 71 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDC---------------------------TANTNTCNKY 71 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEET---------------------------TTCHHHHHHT
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEEC---------------------------CCCHHHHHhc
Confidence 3489999999999999999999999999999876 77888865 4567899999
Q ss_pred CCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 532 GVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 532 ~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+|.++||++++ ++|+.+..+.|..+.+.+.+++...+
T Consensus 72 ~v~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~ 108 (481)
T 3f8u_A 72 GVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQA 108 (481)
T ss_dssp TCCEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHT
T ss_pred CCCCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhc
Confidence 99999999999 88988889999999999988887665
No 480
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.80 E-value=1.3e-08 Score=116.37 Aligned_cols=86 Identities=22% Similarity=0.412 Sum_probs=71.3
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCC-CEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCChhHHHH
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM-PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDMNLWRE 530 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~-~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~l~~~ 530 (1089)
.+|++||+|||+||++|+.+.|.|.+++++|++. ++.++.|.. +...++.
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~-----------------------------~~~~~~~ 316 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDS-----------------------------TANEVEA 316 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEET-----------------------------TTCBCSS
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEEC-----------------------------Cccchhh
Confidence 6899999999999999999999999999999864 688888843 1112567
Q ss_pred hCCCceeEEEEECCC-CcEEEEecCCCchhhHHHHHH
Q 001380 531 LGVNSWPTFAVVGPN-GKLLAQLAGEGHRKDLDDLVE 566 (1089)
Q Consensus 531 ~~v~~~Pt~~lid~~-G~i~~~~~G~~~~~~l~~~l~ 566 (1089)
|+|.++|++++++++ |+...++.|..+.+.+.++|+
T Consensus 317 ~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~ 353 (361)
T 3uem_A 317 VKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLE 353 (361)
T ss_dssp CCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHT
T ss_pred cCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHH
Confidence 999999999999655 677788899888888777764
No 481
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.79 E-value=1.1e-08 Score=107.57 Aligned_cols=115 Identities=16% Similarity=0.201 Sum_probs=80.4
Q ss_pred cccCCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCCCEEEEEEeCCCCC-Chh-------------cHHHHHHHHHHcC
Q 001380 449 RDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFD-NEK-------------DLEAIRNAVLRYG 514 (1089)
Q Consensus 449 ~~~~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~~v~vi~v~~~~~~-~~~-------------~~~~~~~~~~~~~ 514 (1089)
...++|++|+.||++|||+|+.++|.|.++.++ ++.++.++.+-.. +.+ ....+.+++...+
T Consensus 82 g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 157 (216)
T 1eej_A 82 KAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 157 (216)
T ss_dssp CCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred cCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCC
Confidence 445789999999999999999999999998763 5778777653211 111 1223444444444
Q ss_pred Ccc---ceeecCChhHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHHHHh
Q 001380 515 ISH---PVVNDGDMNLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAALLFY 572 (1089)
Q Consensus 515 ~~~---~v~~d~~~~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l~~~ 572 (1089)
++. ....+.+.++++.|||.++|++++. +|+ .+.|....+.+.++|+..++..
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~---~~~G~~~~~~l~~~l~~~~~~~ 213 (216)
T 1eej_A 158 VAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGT---LVPGYQPPKEMKEFLDEHQKMT 213 (216)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSC---EEESCCCHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCe---EecCCCCHHHHHHHHHHhhhhc
Confidence 442 2233456789999999999998654 454 4568888899999998876653
No 482
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.78 E-value=1.4e-06 Score=94.67 Aligned_cols=220 Identities=11% Similarity=0.123 Sum_probs=143.8
Q ss_pred CCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEEEEECCC-CeEEEEecCCC
Q 001380 621 NHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVN-DTVRTLAGNGT 699 (1089)
Q Consensus 621 ~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~~~d~~~-g~v~~~ag~g~ 699 (1089)
..+.|.+++..+.....+... . .....++++|+|+.|+++. ++.|+.+|..+ +....+.....
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~-~-------------~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~ 83 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT-P-------------ELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFA 83 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE-S-------------SCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTC
T ss_pred cceeEEEEeCCCCceeeeccC-C-------------cceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccc
Confidence 456788888765444333222 1 1457999999999777765 67999999988 77665542110
Q ss_pred CCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC---CCcEEEEEECCCCeEEEEeCCCccccCCCCCCCCccccCCc
Q 001380 700 KGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA---GQHQIWEHSTVDGVTRAFSGDGYERNLNGSSSLNTSFAQPS 776 (1089)
Q Consensus 700 ~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~---~~~~I~~~~~~~g~~~~~~g~g~~~~~~g~~~~~~~~~~P~ 776 (1089)
-..+.+++++|++..|+++.. +..+||.++..++....+... ....
T Consensus 84 ---------------~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------~~~~ 132 (297)
T 2ojh_A 84 ---------------TICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN----------------LPSY 132 (297)
T ss_dssp ---------------CCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS----------------SSEE
T ss_pred ---------------cccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC----------------CCcc
Confidence 124578999999988888773 367999999887765554321 1256
Q ss_pred eEEEcCCCCEEEEEeCCCC--eEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEE
Q 001380 777 GISLSPDFMEIYVADSESS--SIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVA 853 (1089)
Q Consensus 777 glav~~~g~~lyvad~~~~--~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVa 853 (1089)
.++++++|+.|+++....+ .|..++..++....+... -..+..++++++|+ ++++
T Consensus 133 ~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------------~~~~~~~~~s~dg~~l~~~ 190 (297)
T 2ojh_A 133 WHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG----------------------EGRNDGPDYSPDGRWIYFN 190 (297)
T ss_dssp EEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS----------------------SSCEEEEEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC----------------------CCccccceECCCCCEEEEE
Confidence 7899999988886665555 455555665554433211 12357789999996 5655
Q ss_pred e--CCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCc-EEEEEC----------CCCEEEEEeC
Q 001380 854 D--SYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGN-LFIADT----------NNNIIRYLDL 920 (1089)
Q Consensus 854 D--~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~----------~n~~I~~~~~ 920 (1089)
. ....+|..++..++.+..+.... .....++++++|+ |+++.. ...+|.++++
T Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDGSSVERITDSA--------------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp ECTTSSCEEEEEETTSSCEEECCCCS--------------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred ecCCCCccEEEECCCCCCcEEEecCC--------------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 4 34567888887777776664321 1245678888886 444433 2267999999
Q ss_pred CCC
Q 001380 921 NKE 923 (1089)
Q Consensus 921 ~~~ 923 (1089)
.+.
T Consensus 257 ~~~ 259 (297)
T 2ojh_A 257 DGG 259 (297)
T ss_dssp TSC
T ss_pred CCC
Confidence 876
No 483
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.78 E-value=1.5e-08 Score=101.43 Aligned_cols=91 Identities=14% Similarity=0.159 Sum_probs=70.1
Q ss_pred CCCEEEEEEec-------CCCcchhhhhhhHHHHHHHcCC----CCEEEEEEeCCCCCChhcHHHHHHHHHHcCCcccee
Q 001380 452 KGKVVVLDFWT-------YCCINCMHVLPDLEFLEKKYKD----MPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVV 520 (1089)
Q Consensus 452 ~gk~vll~Fwa-------~wC~~C~~~~p~l~~l~~~~~~----~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 520 (1089)
++.+|||+||| .||++|+...|.+++++++|.. ..+.+.-|.+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~-------------------------- 89 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDV-------------------------- 89 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEET--------------------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEEC--------------------------
Confidence 45689999999 4999999999999999999861 3488887754
Q ss_pred ecCChhHHHHhCCCceeEEEEECCCCcEE-----------EEe--c-C-CCchhhHHHHHHHHH
Q 001380 521 NDGDMNLWRELGVNSWPTFAVVGPNGKLL-----------AQL--A-G-EGHRKDLDDLVEAAL 569 (1089)
Q Consensus 521 ~d~~~~l~~~~~v~~~Pt~~lid~~G~i~-----------~~~--~-G-~~~~~~l~~~l~~~l 569 (1089)
|.+.+++++|||+++||++++-+.+..- ..+ . | ....+.+.++|.+.+
T Consensus 90 -d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t 152 (178)
T 3ga4_A 90 -NEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKIL 152 (178)
T ss_dssp -TTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHH
T ss_pred -ccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhc
Confidence 6788999999999999999995444322 222 2 3 556777777776544
No 484
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.77 E-value=4.3e-06 Score=92.44 Aligned_cols=201 Identities=13% Similarity=0.230 Sum_probs=129.9
Q ss_pred CCeEEEEeCCCCEEEEEeCCCCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeC----CC---EEEEEECC--CCEEE
Q 001380 612 NNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAK----KN---LLYVADTE--NHALR 682 (1089)
Q Consensus 612 ~g~L~vsd~~~~~I~~~~~~g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~----g~---~lyVaD~~--n~~I~ 682 (1089)
...++|+....+.+.++|.+|+.+..+..+ +++++.+-+. |. .+|+++.. +++|+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g----------------~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~ 102 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNTG----------------KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE 102 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECCS----------------CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccCC----------------CcccEEEecccccCCceEeEEEEeCCCCCCCeEE
Confidence 344566655567899999999999887542 4566666552 21 57999998 99998
Q ss_pred EE--ECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEE--ecCCC--EEEEEECCCcEEEEEEC---CCCe----
Q 001380 683 EI--DFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCY--KPINE--KVYIAMAGQHQIWEHST---VDGV---- 749 (1089)
Q Consensus 683 ~~--d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~--~~~g~--~lyvad~~~~~I~~~~~---~~g~---- 749 (1089)
.| |++++.++.+..... .....+..|.|+|+ ++.++ ++||.+.. +.++.|.. .+|.
T Consensus 103 vf~iDp~~~~l~~i~~~~~----------pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~ 171 (355)
T 3amr_A 103 IYAIDGKNGTLQSMTDPDH----------PIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGK 171 (355)
T ss_dssp EEEECTTTCCEEECSCTTS----------CEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEE
T ss_pred EEEECCCCCceeecccccc----------CcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccce
Confidence 88 556777766642100 00112468999999 77655 46666654 67766554 2332
Q ss_pred -EEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcC--CCCe-EEEecCCCCCCCCccccC
Q 001380 750 -TRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLK--TGGS-RLLAGGDPIFPDNLFKFG 825 (1089)
Q Consensus 750 -~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~--~~~~-~~~~g~~~~~~~~l~~~g 825 (1089)
++.|.- -.+|.|+++|+..+.|||++...+ |.+|+.+ ++.. +.+.- ++
T Consensus 172 lVR~f~l----------------gsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~-----------~~ 223 (355)
T 3amr_A 172 KVRAFKM----------------NSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDR-----------AD 223 (355)
T ss_dssp EEEEEEC----------------SSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEE-----------BS
T ss_pred EEEEecC----------------CCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEE-----------ec
Confidence 233331 127899999998789999998755 9999944 3222 11210 00
Q ss_pred CCCCccccccc-cCceEEEEc--cC--CcEEEEeCCCCEEEEEeCC--CCeEEEEe
Q 001380 826 DRDGMGSEVLL-QHPLGVYCA--KN--GQIYVADSYNHKIKKLDPA--SNRVSTLA 874 (1089)
Q Consensus 826 ~~dg~~~~~~l-~~P~gva~~--~~--G~lyVaD~~n~~I~~~d~~--~~~v~t~~ 874 (1089)
. ..| ..+.||++. ++ |.|++++-+++...+||.. ...+.++.
T Consensus 224 ~-------g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 224 G-------RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp S-------SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred C-------CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 0 012 268999995 33 4699999999999999985 23455553
No 485
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.77 E-value=8.3e-07 Score=103.25 Aligned_cols=203 Identities=16% Similarity=0.187 Sum_probs=140.4
Q ss_pred CceEEEeecCCeEEEEeCC--CCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEEC--C
Q 001380 603 PGKLAIDILNNRLFISDSN--HNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADT--E 677 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~--~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~--~ 677 (1089)
...++++|.+..|+.+... ...|.++|.. |+.. .+... . .....++++|+|+.|+++.. +
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~-~-------------~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF-P-------------RHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC-S-------------SCEEEEEECTTSSEEEEEECTTS
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC-C-------------CcccCEEEcCCCCEEEEEEecCC
Confidence 3467888855566655543 3689999987 4443 33322 1 14578999999997776543 3
Q ss_pred CCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEEC--CCcEEEEEECCCCeEEEEeC
Q 001380 678 NHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMA--GQHQIWEHSTVDGVTRAFSG 755 (1089)
Q Consensus 678 n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~--~~~~I~~~~~~~g~~~~~~g 755 (1089)
+..|+.+|+.++....+.+.. .....++|+|+|..|+++.. +..+||.+|..++.+..+..
T Consensus 246 ~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~ 308 (415)
T 2hqs_A 246 SLNLYVMDLASGQIRQVTDGR-----------------SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW 308 (415)
T ss_dssp SCEEEEEETTTCCEEECCCCS-----------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC
T ss_pred CceEEEEECCCCCEEeCcCCC-----------------CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec
Confidence 457999999988887765322 14567899999988887764 34489999998887655432
Q ss_pred CCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCC--CCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCcccc
Q 001380 756 DGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSE--SSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSE 833 (1089)
Q Consensus 756 ~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~--~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~ 833 (1089)
.+ .....++++|+|+.|+++... ...|+.++..++....+..+
T Consensus 309 ~~---------------~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~-------------------- 353 (415)
T 2hqs_A 309 EG---------------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-------------------- 353 (415)
T ss_dssp SS---------------SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS--------------------
T ss_pred CC---------------CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC--------------------
Confidence 11 134578999999888887754 45899999987776544221
Q ss_pred ccccCceEEEEccCCc-EEEEeCCCC--EEEEEeCCCCeEEEEec
Q 001380 834 VLLQHPLGVYCAKNGQ-IYVADSYNH--KIKKLDPASNRVSTLAG 875 (1089)
Q Consensus 834 ~~l~~P~gva~~~~G~-lyVaD~~n~--~I~~~d~~~~~v~t~~g 875 (1089)
.....++++++|+ |+++...++ .|+.+|.+++...++.+
T Consensus 354 ---~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 354 ---FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp ---SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred ---CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 1356789999996 555544443 79999998888777753
No 486
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.76 E-value=6.7e-07 Score=104.46 Aligned_cols=240 Identities=12% Similarity=0.155 Sum_probs=166.0
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCCC-----------CEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLDG-----------NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNL 670 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~g-----------~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~ 670 (1089)
.+..+++.+.++.++++-...+.|.+++... +.+..+.+. -....+|++++++..
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h--------------~~~v~~l~~~~~~~~ 195 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH--------------QKEGYGLSWNPNLNG 195 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC--------------SSCCCCEEECTTSTT
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC--------------CCCeEEEEeCCCCCC
Confidence 4667899885577888888888999998753 223333222 124688999998873
Q ss_pred EEEEECCCCEEEEEECCCCeE--------EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEE
Q 001380 671 LYVADTENHALREIDFVNDTV--------RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWE 742 (1089)
Q Consensus 671 lyVaD~~n~~I~~~d~~~g~v--------~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~ 742 (1089)
++++-..++.|+.++...+.. ..+.+ .-...++++++|.++.++++....+.|..
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----------------h~~~v~~v~~~p~~~~~l~s~~~dg~i~i 258 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-----------------HTAVVEDVAWHLLHESLFGSVADDQKLMI 258 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-----------------CSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-----------------CCCCEeeeEEeCCCCCEEEEEeCCCeEEE
Confidence 455556678899999876211 11111 11357899999976688888888999999
Q ss_pred EECCCC----eEEEEeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCC--eEEEecCCCC
Q 001380 743 HSTVDG----VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGG--SRLLAGGDPI 816 (1089)
Q Consensus 743 ~~~~~g----~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~--~~~~~g~~~~ 816 (1089)
||...+ .+..+.+. -..++.|+++++++.++++-+..+.|+.++..... +..+.+.
T Consensus 259 ~d~~~~~~~~~~~~~~~~---------------~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h--- 320 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDAH---------------TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH--- 320 (430)
T ss_dssp EETTCSCSSSCSEEEECC---------------SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC---
T ss_pred EECCCCCCCcceeEeecC---------------CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC---
Confidence 998765 22233211 12467899999987788888888999999987522 2222211
Q ss_pred CCCCccccCCCCCccccccccCceEEEEccCC-cEEEEeCCCCEEEEEeCCC---------------CeEEEEeccCCCC
Q 001380 817 FPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNG-QIYVADSYNHKIKKLDPAS---------------NRVSTLAGIGKAG 880 (1089)
Q Consensus 817 ~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G-~lyVaD~~n~~I~~~d~~~---------------~~v~t~~g~g~~g 880 (1089)
-.....++++++| .++++....++|+.+|... ..+.+..+
T Consensus 321 -------------------~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----- 376 (430)
T 2xyi_A 321 -------------------KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG----- 376 (430)
T ss_dssp -------------------SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-----
T ss_pred -------------------CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-----
Confidence 1235788999988 5888888889999998764 22222221
Q ss_pred CCCCcccccccCCCceEEEccCCc-EEEEECCCCEEEEEeCCCC
Q 001380 881 FKDGAALAAQLSEPAGIIEAQNGN-LFIADTNNNIIRYLDLNKE 923 (1089)
Q Consensus 881 ~~~g~~~~~~l~~P~gi~vd~~G~-lyVad~~n~~I~~~~~~~~ 923 (1089)
.-..+..+++.++|. ++++...++.|+++++...
T Consensus 377 ---------h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 377 ---------HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp ---------CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ---------CCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 234588999999987 8888889999999998764
No 487
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=98.76 E-value=6.7e-09 Score=110.48 Aligned_cols=83 Identities=17% Similarity=0.177 Sum_probs=63.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC----hHhHHHHHHHCCCCCCCcc-EEEEcCCccCCCCCHHHHHHHHHHcCCCC
Q 001380 165 IGFPGALELINQCKSKGLKVAVASSAD----RIKVDANLAAAGLPVSMFD-AIVSADAFENLKPAPDIFLSASKILNVPT 239 (1089)
Q Consensus 165 ~~~pG~~~lL~~Lk~~Gi~vaIvSn~~----~~~~~~~l~~~gl~~~~fd-~i~~~~~~~~~KP~~~~~~~~l~~lgv~p 239 (1089)
.++||+.++|+.|+++|++++|+||+. ++.+...|+++|++ .+.+ .++.... ...+...+..+.+. |.
T Consensus 101 ~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~-~~~~~~Lilr~~---~~~K~~~r~~l~~~-Gy-- 173 (262)
T 3ocu_A 101 RAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN-GVEESAFYLKKD---KSAKAARFAEIEKQ-GY-- 173 (262)
T ss_dssp EECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS-CCSGGGEEEESS---CSCCHHHHHHHHHT-TE--
T ss_pred CCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC-cccccceeccCC---CCChHHHHHHHHhc-CC--
Confidence 789999999999999999999999974 46889999999996 5552 4444332 23455666555554 44
Q ss_pred CcEEEEcCChhhHHH
Q 001380 240 SECIVIEDALAGVQA 254 (1089)
Q Consensus 240 ~~~v~VGD~~~Di~a 254 (1089)
..+++|||.++|+.+
T Consensus 174 ~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 174 EIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEEEEEESSGGGGCS
T ss_pred CEEEEECCChHHhcc
Confidence 349999999999998
No 488
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.76 E-value=7.6e-07 Score=111.70 Aligned_cols=270 Identities=13% Similarity=0.097 Sum_probs=159.6
Q ss_pred CCCceEEEeecCCeEEEEeCCCC-----EEEEEeCC-CCEEEEEecCCCCCCCCCCCC---cccc---------CCccee
Q 001380 601 KFPGKLAIDILNNRLFISDSNHN-----RIVVTDLD-GNFIVQIGSSGEEGLRDGSFD---DATF---------NRPQGL 662 (1089)
Q Consensus 601 ~~P~~vavd~~~g~L~vsd~~~~-----~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~---~~~f---------~~P~gl 662 (1089)
..+..+++++++..|+.+....+ .|.+++.+ |+....+...+.. .||..- +... .....+
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL--PGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC----------------------CCEESCCC
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc--cccccccchhhhhhhhhhhccccCccee
Confidence 45678899986666776665344 89999987 5554444322110 011000 0000 125789
Q ss_pred EEeeCCCEEEEEECCCCEEEEEECCCC---eEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcE
Q 001380 663 AYNAKKNLLYVADTENHALREIDFVND---TVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQ 739 (1089)
Q Consensus 663 a~d~~g~~lyVaD~~n~~I~~~d~~~g---~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~ 739 (1089)
+++|+|+.|+++.. +.|+.+|..++ .+..+...+ .....++|+|+|+.|+++.. +.
T Consensus 115 ~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~-----------------~~~~~~~~SPDG~~la~~~~--~~ 173 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGE-----------------GFATDAKLSPKGGFVSFIRG--RN 173 (741)
T ss_dssp EECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSS-----------------SCEEEEEECTTSSEEEEEET--TE
T ss_pred EECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCC-----------------cccccccCCCCCCEEEEEeC--Cc
Confidence 99999998888874 88999999877 555543211 24678999999988877763 58
Q ss_pred EEEEECCCCeEEEEeCCCccccCCCCCC--CCccccCCceEEEcCCCCEEEEEeCCCC----------------------
Q 001380 740 IWEHSTVDGVTRAFSGDGYERNLNGSSS--LNTSFAQPSGISLSPDFMEIYVADSESS---------------------- 795 (1089)
Q Consensus 740 I~~~~~~~g~~~~~~g~g~~~~~~g~~~--~~~~~~~P~glav~~~g~~lyvad~~~~---------------------- 795 (1089)
|+.+|..++....+...+.....+|... ....+..+.+++++|||+.|+++....+
T Consensus 174 i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 174 LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 9999999888776543221111011000 0011334688999999988888754321
Q ss_pred ----------eEEEEEcCC-CCeEEEecCCCCCCCCccccCCCCCccccccccCceEEEEccCCc-EEEEeC----CCCE
Q 001380 796 ----------SIRALNLKT-GGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLGVYCAKNGQ-IYVADS----YNHK 859 (1089)
Q Consensus 796 ----------~I~~~~~~~-~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~gva~~~~G~-lyVaD~----~n~~ 859 (1089)
+|+.++..+ +....+..+ . ..-.....+++ +||+ |+++.. ....
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~------------~-------~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~ 313 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWIDLG------------K-------EQDIYLARVNW-RDPQHLSFQRQSRDQKKLD 313 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEECCC------------S-------CSSEEEEEEEE-EETTEEEEEEEETTSSEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEecCC------------C-------CcceEEEEEEe-CCCCEEEEEEecccCCeEE
Confidence 566666655 444333110 0 00123567899 9996 554432 3467
Q ss_pred EEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCC--EEEEEeCCC
Q 001380 860 IKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNN--IIRYLDLNK 922 (1089)
Q Consensus 860 I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~--~I~~~~~~~ 922 (1089)
|+.+|..++.+..+......+ -+.....+++.++|+++++...++ +|..+++++
T Consensus 314 i~~~d~~~g~~~~~~~~~~~~---------~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 314 LVEVTLASNQQRVLAHETSPT---------WVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG 369 (741)
T ss_dssp EEEEETTTCCEEEEEEEECSS---------CCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS
T ss_pred EEEEECCCCceEEEEEcCCCC---------cCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC
Confidence 999999888876664321111 111234678888888666554443 666666554
No 489
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.75 E-value=5.5e-06 Score=103.25 Aligned_cols=258 Identities=11% Similarity=0.130 Sum_probs=156.2
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeCCC-----CEEEEEecCCCCCCCCCC-CCccccCCcceeEEeeCCCEEEEEEC
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDG-----NFIVQIGSSGEEGLRDGS-FDDATFNRPQGLAYNAKKNLLYVADT 676 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~~g-----~~~~~i~~~g~~g~~dG~-~~~~~f~~P~gla~d~~g~~lyVaD~ 676 (1089)
...++++|.+..|+++. ++.|.+++.++ .....+...+......|. ..+..+..+.+++++|+|+.|+++..
T Consensus 123 ~~~~~~SpdG~~la~~~--~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~ 200 (706)
T 2z3z_A 123 TASLDFSPVGDRVAYVR--NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRM 200 (706)
T ss_dssp CTTCEECTTSSEEEEEE--TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEE
T ss_pred ccCCcCCCCCCEEEEEE--CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEE
Confidence 34568888555665543 47898888764 333222221111111110 11233556799999999998887751
Q ss_pred --------------------------------CCCEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEe
Q 001380 677 --------------------------------ENHALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYK 724 (1089)
Q Consensus 677 --------------------------------~n~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~ 724 (1089)
....|+.+|.+++....+..... .-..+..++|+
T Consensus 201 d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s 266 (706)
T 2z3z_A 201 DQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP--------------KEKFLTNLSWS 266 (706)
T ss_dssp ECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC--------------TTCEEEEEEEC
T ss_pred CCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC--------------CceeEeeEEEE
Confidence 33578899998888766542100 01246789999
Q ss_pred cCCCEEEEEECCC----cEEEEEECCCC-eEEEEeCCCccccCCCCCCCCccccCCceEEEcC--CCCEEEEEeCC-CCe
Q 001380 725 PINEKVYIAMAGQ----HQIWEHSTVDG-VTRAFSGDGYERNLNGSSSLNTSFAQPSGISLSP--DFMEIYVADSE-SSS 796 (1089)
Q Consensus 725 ~~g~~lyvad~~~----~~I~~~~~~~g-~~~~~~g~g~~~~~~g~~~~~~~~~~P~glav~~--~g~~lyvad~~-~~~ 796 (1089)
|+|+.|+++.... ..|+.+|..++ .+..+..... ........++++++ +|+.+|+++.. ..+
T Consensus 267 pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~----------~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 267 PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD----------KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC----------SSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC----------CCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 9998888865432 48999999988 6655542110 01112236789999 98666655432 346
Q ss_pred EEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccccCceE-EEEccCCc-EEEEeCCCC----EEEEEeCCCCeE
Q 001380 797 IRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLLQHPLG-VYCAKNGQ-IYVADSYNH----KIKKLDPASNRV 870 (1089)
Q Consensus 797 I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~P~g-va~~~~G~-lyVaD~~n~----~I~~~d~~~~~v 870 (1089)
|+.++.+++..+.+.++. ....+ ++++++|+ ||++....+ +|+++|.+++.+
T Consensus 337 l~~~~~~~~~~~~l~~~~----------------------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 394 (706)
T 2z3z_A 337 LYLYDTTGRLIRQVTKGE----------------------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT 394 (706)
T ss_dssp EEEEETTSCEEEECCCSS----------------------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC
T ss_pred EEEEECCCCEEEecCCCC----------------------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc
Confidence 777776555444443211 01223 68899984 777776654 899999888776
Q ss_pred EEEeccCCCCCCCCcccccccCCCceEEEccCCcEEE-E-ECCC--CEEEEEeCCCC
Q 001380 871 STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFI-A-DTNN--NIIRYLDLNKE 923 (1089)
Q Consensus 871 ~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyV-a-d~~n--~~I~~~~~~~~ 923 (1089)
..+... .....+++.++|+.++ + ...+ ..|..+++.++
T Consensus 395 ~~l~~~---------------~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 395 KDLTPE---------------SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EESCCS---------------SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred eeccCC---------------CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 665321 1245678888887333 2 2222 67999999876
No 490
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.75 E-value=3.6e-06 Score=93.91 Aligned_cols=242 Identities=13% Similarity=0.149 Sum_probs=157.6
Q ss_pred ceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEEE
Q 001380 604 GKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHALR 682 (1089)
Q Consensus 604 ~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I~ 682 (1089)
..+++++ +++++++-...+.|.++|.. |+.+..+.+. . .....++++++++ ++++-..++.|+
T Consensus 69 ~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h-~-------------~~v~~~~~~~~~~-~l~s~s~D~~i~ 132 (319)
T 3frx_A 69 QDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGH-K-------------SDVMSVDIDKKAS-MIISGSRDKTIK 132 (319)
T ss_dssp EEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECC-S-------------SCEEEEEECTTSC-EEEEEETTSCEE
T ss_pred EEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccC-C-------------CcEEEEEEcCCCC-EEEEEeCCCeEE
Confidence 3577886 67777777778999999986 6666665443 1 2457899999998 455555678899
Q ss_pred EEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCC-----CEEEEEECCCcEEEEEECCCCeEEE-EeCC
Q 001380 683 EIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPIN-----EKVYIAMAGQHQIWEHSTVDGVTRA-FSGD 756 (1089)
Q Consensus 683 ~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g-----~~lyvad~~~~~I~~~~~~~g~~~~-~~g~ 756 (1089)
.+|..+..+.++.+.. .....+++.|.. +.++++....+.|..||...+.... +.+.
T Consensus 133 vwd~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h 195 (319)
T 3frx_A 133 VWTIKGQCLATLLGHN-----------------DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH 195 (319)
T ss_dssp EEETTSCEEEEECCCS-----------------SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEECCCCeEEEEeccC-----------------CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC
Confidence 9999888887775432 134567776643 2356666678889999988776443 3321
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEVLL 836 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~~l 836 (1089)
-.....++++|+| .++++-+..+.|+.++..++........ -
T Consensus 196 ---------------~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~~~~~~~~~~----------------------~ 237 (319)
T 3frx_A 196 ---------------NSNINTLTASPDG-TLIASAGKDGEIMLWNLAAKKAMYTLSA----------------------Q 237 (319)
T ss_dssp ---------------CSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEEEEEEC----------------------C
T ss_pred ---------------CCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEecC----------------------C
Confidence 1235689999998 5556666779999999886543322110 0
Q ss_pred cCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEE
Q 001380 837 QHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916 (1089)
Q Consensus 837 ~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~ 916 (1089)
.....++++|+|.++++-.. ..|+.++.+++.+.........++.. ..-.....+++.++|+.+++-..++.|+
T Consensus 238 ~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~spdg~~l~sg~~Dg~i~ 311 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSK-----AAEPHAVSLAWSADGQTLFAGYTDNVIR 311 (319)
T ss_dssp SCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCG-----GGCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCcccccccc-----CcCcceeEEEECCCCCEEEEeecCceEE
Confidence 13567999999976655443 45777776655443322111111100 0112345789999999888888889999
Q ss_pred EEeCCC
Q 001380 917 YLDLNK 922 (1089)
Q Consensus 917 ~~~~~~ 922 (1089)
++++.+
T Consensus 312 vWd~~t 317 (319)
T 3frx_A 312 VWQVMT 317 (319)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 988754
No 491
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.75 E-value=1.4e-05 Score=88.41 Aligned_cols=240 Identities=16% Similarity=0.197 Sum_probs=155.9
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
....+++++ +++++++-...+.|.+++.. ++....+.+. . .....++++++++.|+.+ ..++.
T Consensus 25 ~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h-~-------------~~v~~~~~~~~~~~l~s~-~~d~~ 88 (312)
T 4ery_A 25 AVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGH-K-------------LGISDVAWSSDSNLLVSA-SDDKT 88 (312)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCC-S-------------SCEEEEEECTTSSEEEEE-ETTSE
T ss_pred cEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccC-C-------------CceEEEEEcCCCCEEEEE-CCCCE
Confidence 345688887 66666666667889999875 6766665432 1 235789999999955544 45789
Q ss_pred EEEEECCCCe-EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEE-EEeCCCc
Q 001380 681 LREIDFVNDT-VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTR-AFSGDGY 758 (1089)
Q Consensus 681 I~~~d~~~g~-v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~-~~~g~g~ 758 (1089)
|+.+|..++. +.++.+.. .....++++|+++.| ++....+.|..||..++... .+.+.
T Consensus 89 i~vwd~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~-- 148 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHS-----------------NYVFCCNFNPQSNLI-VSGSFDESVRIWDVKTGKCLKTLPAH-- 148 (312)
T ss_dssp EEEEETTTCCEEEEEECCS-----------------SCEEEEEECSSSSEE-EEEETTSCEEEEETTTCCEEEEECCC--
T ss_pred EEEEECCCCcEEEEEcCCC-----------------CCEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCEEEEEecCC--
Confidence 9999998765 44443211 245788999988555 44455788999998877543 33221
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEE-EecCCCCCCCCccccCCCCCcccccccc
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL-LAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~-~~g~~~~~~~~l~~~g~~dg~~~~~~l~ 837 (1089)
-.....++++++++ ++++-+..+.|+.++..++.... +.... -.
T Consensus 149 -------------~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~---------------------~~ 193 (312)
T 4ery_A 149 -------------SDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDD---------------------NP 193 (312)
T ss_dssp -------------SSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCSS---------------------CC
T ss_pred -------------CCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeeEEeccC---------------------CC
Confidence 11246889999984 45555567899999988655422 21100 01
Q ss_pred CceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEE-EeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCEEE
Q 001380 838 HPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVST-LAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNIIR 916 (1089)
Q Consensus 838 ~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t-~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~I~ 916 (1089)
....++++++|+.+++-...+.|+.+|..++.... +.+.... ...........+|.++++...++.|+
T Consensus 194 ~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~sg~~dg~i~ 262 (312)
T 4ery_A 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE-----------KYCIFANFSVTGGKWIVSGSEDNLVY 262 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS-----------SSCCCEEEECSSSCEEEECCTTSCEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc-----------eEEEEEEEEeCCCcEEEEECCCCEEE
Confidence 23568899999888888888999999998776543 3221100 00011111224567778888888999
Q ss_pred EEeCCCC
Q 001380 917 YLDLNKE 923 (1089)
Q Consensus 917 ~~~~~~~ 923 (1089)
.+++...
T Consensus 263 vwd~~~~ 269 (312)
T 4ery_A 263 IWNLQTK 269 (312)
T ss_dssp EEETTTC
T ss_pred EEECCCc
Confidence 9998876
No 492
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.75 E-value=4.8e-07 Score=102.91 Aligned_cols=242 Identities=11% Similarity=0.067 Sum_probs=156.8
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEE--EecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCC
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQ--IGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENH 679 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~--i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~ 679 (1089)
-..+++.+ +++++++. ..+.|.++|.. ++.... +...+ .-.....++++|+|+.|+.+ ..++
T Consensus 97 V~~~~~s~-d~~~l~~s-~dg~v~lWd~~~~~~~~~~~~~~~~------------h~~~V~~v~~spdg~~l~sg-s~dg 161 (357)
T 4g56_B 97 VTDVAWVS-EKGILVAS-DSGAVELWEILEKESLLVNKFAKYE------------HDDIVKTLSVFSDGTQAVSG-GKDF 161 (357)
T ss_dssp EEEEEEET-TTEEEEEE-TTSCEEEC--------CCCCEEECC------------CSSCEEEEEECSSSSEEEEE-ETTS
T ss_pred EEEEEEcC-CCCEEEEE-CCCEEEEeeccccceeEEEeeccCC------------CCCCEEEEEECCCCCEEEEE-eCCC
Confidence 34678887 67776664 46788888865 332211 11110 01245789999999955544 4578
Q ss_pred EEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeEEEEeCCCcc
Q 001380 680 ALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVTRAFSGDGYE 759 (1089)
Q Consensus 680 ~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~~~~~g~g~~ 759 (1089)
.|+.+|..++......... -...+.|+++++++.++++....+.|..||..++........
T Consensus 162 ~v~iwd~~~~~~~~~~~~h----------------~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~--- 222 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAH----------------SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF--- 222 (357)
T ss_dssp CEEEEETTTTEEEEEECCC----------------SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC---
T ss_pred eEEEEECCCCcEEEEEcCC----------------CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee---
Confidence 8999999887755443111 124678999998877777777788898888766542211100
Q ss_pred ccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCe-EEEecCCCCCCCCccccCCCCCccccccccC
Q 001380 760 RNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS-RLLAGGDPIFPDNLFKFGDRDGMGSEVLLQH 838 (1089)
Q Consensus 760 ~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~-~~~~g~~~~~~~~l~~~g~~dg~~~~~~l~~ 838 (1089)
...-..+..++++|+++.++++-...+.|+.++..++.. ..+.+. -..
T Consensus 223 ---------~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~----------------------~~~ 271 (357)
T 4g56_B 223 ---------CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH----------------------SQN 271 (357)
T ss_dssp ---------TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC----------------------SSC
T ss_pred ---------ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc----------------------cee
Confidence 011124678999998767877777788999999876543 222111 112
Q ss_pred ceEEEEccCC-cEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEcc-CCcEEEEECCCCEEE
Q 001380 839 PLGVYCAKNG-QIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQ-NGNLFIADTNNNIIR 916 (1089)
Q Consensus 839 P~gva~~~~G-~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~-~G~lyVad~~n~~I~ 916 (1089)
-.+++++++| ++.++-+..+.|+.+|..++++....+. -....+|++.+ +|+++++-..+++|+
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H--------------~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSH--------------RDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCC--------------SSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCC--------------CCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 4678999887 5666667788999999998877665432 13367889986 788888888889999
Q ss_pred EEeCCCC
Q 001380 917 YLDLNKE 923 (1089)
Q Consensus 917 ~~~~~~~ 923 (1089)
.+++...
T Consensus 338 iW~~~~~ 344 (357)
T 4g56_B 338 HHHLPSE 344 (357)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9998765
No 493
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.74 E-value=1.4e-08 Score=117.10 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=71.3
Q ss_pred CCCEEEEEEecCCCcchhhhhhhHHHHHHHcCCC-------CEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCC
Q 001380 452 KGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDM-------PFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGD 524 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~p~l~~l~~~~~~~-------~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~ 524 (1089)
.+|+|||+|||+||++|+.+.|.+.+++++|++. .+.++.|.+ |.+
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~---------------------------d~~ 93 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNC---------------------------ASE 93 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEET---------------------------TTC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEEC---------------------------CCC
Confidence 3589999999999999999999999999999743 389999965 456
Q ss_pred hhHHHHhCCCceeEEEEECCCCc-EEEEecCC------------CchhhHHHHHHHHHHH
Q 001380 525 MNLWRELGVNSWPTFAVVGPNGK-LLAQLAGE------------GHRKDLDDLVEAALLF 571 (1089)
Q Consensus 525 ~~l~~~~~v~~~Pt~~lid~~G~-i~~~~~G~------------~~~~~l~~~l~~~l~~ 571 (1089)
.++++.|+|.++||++++++.|. ....+.|. ...++++..++.++..
T Consensus 94 ~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link 153 (470)
T 3qcp_A 94 VDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNK 153 (470)
T ss_dssp HHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhh
Confidence 68999999999999999976553 22233342 3455666666666543
No 494
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.74 E-value=3e-06 Score=98.30 Aligned_cols=243 Identities=16% Similarity=0.238 Sum_probs=163.6
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
....++++| ++.++++-...+.|.++|.. |+.+..+.+. . .....++++++|+ ++++-..++.
T Consensus 110 ~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h-~-------------~~V~~v~~~~~~~-~l~sgs~D~~ 173 (410)
T 1vyh_C 110 PVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGH-T-------------DSVQDISFDHSGK-LLASCSADMT 173 (410)
T ss_dssp CEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCC-S-------------SCEEEEEECTTSS-EEEEEETTSC
T ss_pred cEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecc-C-------------CcEEEEEEcCCCC-EEEEEeCCCe
Confidence 345678887 67778887778999999976 6666555432 1 2457899999999 4555556788
Q ss_pred EEEEECCCCeE-EEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCCeE-EEEeCCCc
Q 001380 681 LREIDFVNDTV-RTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDGVT-RAFSGDGY 758 (1089)
Q Consensus 681 I~~~d~~~g~v-~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g~~-~~~~g~g~ 758 (1089)
|+.+|..++.. .++.+.. .....++++|+++.| ++....+.|..||..++.. ..+.+..
T Consensus 174 i~iwd~~~~~~~~~~~~h~-----------------~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~~~~~~~~h~- 234 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHD-----------------HNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGYCVKTFTGHR- 234 (410)
T ss_dssp CCEEETTSSCEEECCCCCS-----------------SCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEEEEECCS-
T ss_pred EEEEeCCCCceeEEEcCCC-----------------CCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEEEEeCCC-
Confidence 99999877553 3332211 246789999988555 4555678999999987754 3444321
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeEE-EecCCCCCCCCccccCCCCCcccccccc
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSRL-LAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~~-~~g~~~~~~~~l~~~g~~dg~~~~~~l~ 837 (1089)
.....++++++| .++++-+..+.|+.++..++.... +.+.. .
T Consensus 235 --------------~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~----------------------~ 277 (410)
T 1vyh_C 235 --------------EWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHR----------------------H 277 (410)
T ss_dssp --------------SCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCS----------------------S
T ss_pred --------------ccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecCCC----------------------c
Confidence 134578889998 666666678899999988665432 21111 0
Q ss_pred CceEEEEcc--------------------CCcEEEEeCCCCEEEEEeCCCCeE-EEEeccCCCCCCCCcccccccCCCce
Q 001380 838 HPLGVYCAK--------------------NGQIYVADSYNHKIKKLDPASNRV-STLAGIGKAGFKDGAALAAQLSEPAG 896 (1089)
Q Consensus 838 ~P~gva~~~--------------------~G~lyVaD~~n~~I~~~d~~~~~v-~t~~g~g~~g~~~g~~~~~~l~~P~g 896 (1089)
....+++.+ +|.++++-+..+.|+.+|..++.+ .++.+. -....+
T Consensus 278 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h--------------~~~v~~ 343 (410)
T 1vyh_C 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--------------DNWVRG 343 (410)
T ss_dssp CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC--------------SSCEEE
T ss_pred eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC--------------CCcEEE
Confidence 122333333 367788888889999999876654 444332 233578
Q ss_pred EEEccCCcEEEEECCCCEEEEEeCCCCCceEEEEe
Q 001380 897 IIEAQNGNLFIADTNNNIIRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 897 i~vd~~G~lyVad~~n~~I~~~~~~~~~~~~~~l~ 931 (1089)
++++++|+.+++-..++.|+.+++.... .+.++.
T Consensus 344 v~~~~~g~~l~s~s~D~~i~vwd~~~~~-~~~~~~ 377 (410)
T 1vyh_C 344 VLFHSGGKFILSCADDKTLRVWDYKNKR-CMKTLN 377 (410)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTSC-CCEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCc-eEEEEc
Confidence 8999999877888888999999987652 344443
No 495
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=98.73 E-value=6.2e-09 Score=114.88 Aligned_cols=72 Identities=17% Similarity=0.215 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCeEEEEcCCCCHHHHhhcCCcEEecCcccCCHHHHHh
Q 001380 221 LKPAPDIFLSASKILNVPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEERLKEASPSLIRKEIGSVSLNDILT 296 (1089)
Q Consensus 221 ~KP~~~~~~~~l~~lgv~p~~~v~VGD~~~Di~aA~~aG~~~i~V~~g~~~~~l~~~~~d~vi~dl~el~i~~ll~ 296 (1089)
+-.|...++.+++++|++++++++|||+.||+.+++.+|+ ++.+.. ..+++++ .+++++.+..+-.+...|.
T Consensus 214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~--~~~~~~~-~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 214 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGN--AREDIKS-IADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTT--CCHHHHH-HCSEECCCGGGTHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcC--CCHHHHh-hCceeecCCCcChHHHHHH
Confidence 4467788999999999999999999999999999999997 555543 3455555 4899998887765665554
No 496
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.73 E-value=1.7e-06 Score=93.98 Aligned_cols=227 Identities=12% Similarity=0.072 Sum_probs=141.3
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeCCC-CEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECC---C
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDLDG-NFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTE---N 678 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~~g-~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~---n 678 (1089)
...++++|.+..|+++. .+.|.+++.++ .....+..... ...+..++++|+|+.|+++... .
T Consensus 44 v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~------------~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFA------------TICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp CEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTC------------CCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccc------------cccccceEECCCCCEEEEEEeCCCCc
Confidence 45688888555455554 56899999876 43333221100 1245789999999988877632 5
Q ss_pred CEEEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCc--EEEEEECCCCeEEEEeCC
Q 001380 679 HALREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQH--QIWEHSTVDGVTRAFSGD 756 (1089)
Q Consensus 679 ~~I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~--~I~~~~~~~g~~~~~~g~ 756 (1089)
..|+.++..++....+.... ....++++|++..|+++....+ +||.++..++....+...
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNL------------------PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp CEEEEEETTCCCCEECCSSS------------------SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred ceEEEEECCCCceEEeecCC------------------CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 68999998877766654211 3567899999988886654444 688888877766554321
Q ss_pred CccccCCCCCCCCccccCCceEEEcCCCCEEEEEeC--CCCeEEEEEcCCCCeEEEecCCCCCCCCccccCCCCCccccc
Q 001380 757 GYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADS--ESSSIRALNLKTGGSRLLAGGDPIFPDNLFKFGDRDGMGSEV 834 (1089)
Q Consensus 757 g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~--~~~~I~~~~~~~~~~~~~~g~~~~~~~~l~~~g~~dg~~~~~ 834 (1089)
...+..++++++|+.|+++.. +...|+.++..++....+...
T Consensus 172 ---------------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------- 215 (297)
T 2ojh_A 172 ---------------EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS--------------------- 215 (297)
T ss_dssp ---------------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC---------------------
T ss_pred ---------------CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC---------------------
Confidence 124578999999988887754 344566666555554433211
Q ss_pred cccCceEEEEccCCc-EEEEeC----------CCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCC
Q 001380 835 LLQHPLGVYCAKNGQ-IYVADS----------YNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNG 903 (1089)
Q Consensus 835 ~l~~P~gva~~~~G~-lyVaD~----------~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G 903 (1089)
-.....++++++|+ |+++.. ....|..+|..++....+..... .-.....+++.++|
T Consensus 216 -~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~spdg 283 (297)
T 2ojh_A 216 -AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFG-----------GQGTMNSPNWSPDG 283 (297)
T ss_dssp -SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEE-----------STTTSCSCCBCTTS
T ss_pred -CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCC-----------CCcccccceECCCC
Confidence 01245688899996 444433 22679999998876554432100 01235567778888
Q ss_pred c-EEEEE
Q 001380 904 N-LFIAD 909 (1089)
Q Consensus 904 ~-lyVad 909 (1089)
+ |+++.
T Consensus 284 ~~l~~~~ 290 (297)
T 2ojh_A 284 DEFAYVR 290 (297)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 6 54443
No 497
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.73 E-value=9.9e-06 Score=89.54 Aligned_cols=244 Identities=11% Similarity=0.149 Sum_probs=162.5
Q ss_pred CceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCEE
Q 001380 603 PGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHAL 681 (1089)
Q Consensus 603 P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~I 681 (1089)
...++++| ++.++++-...+.|.++|.. ++.+..+... . .....+++.++++.|+ +-..++.|
T Consensus 16 V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~-~-------------~~v~~~~~~~~~~~l~-s~s~d~~i 79 (304)
T 2ynn_A 16 VKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVT-E-------------TPVRAGKFIARKNWII-VGSDDFRI 79 (304)
T ss_dssp EEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECC-S-------------SCEEEEEEEGGGTEEE-EEETTSEE
T ss_pred eEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeecc-C-------------CcEEEEEEeCCCCEEE-EECCCCEE
Confidence 45788998 66677776678999999987 5555555443 1 1346788999999544 44568899
Q ss_pred EEEECCCCe-EEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECCCcEEEEEECCCC-eE-EEEeCCCc
Q 001380 682 REIDFVNDT-VRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAGQHQIWEHSTVDG-VT-RAFSGDGY 758 (1089)
Q Consensus 682 ~~~d~~~g~-v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~~~~I~~~~~~~g-~~-~~~~g~g~ 758 (1089)
+.+|..++. +.++.+.. ...+.|+++|++..| ++....+.|..||..++ .+ ..+.+..
T Consensus 80 ~vwd~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~~~~h~- 140 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHP-----------------DYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALEQTFEGHE- 140 (304)
T ss_dssp EEEETTTCCEEEEEECCS-----------------SCEEEEEECSSSSEE-EEEETTSCEEEEEGGGTTEEEEEECCCC-
T ss_pred EEEECCCCcEEEEEeCCC-----------------CcEEEEEEcCCCCEE-EEECCCCeEEEEECCCCcchhhhhcccC-
Confidence 999998765 44443221 246789999998544 55556788888987765 32 2333211
Q ss_pred cccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCeE-EEecCCCCCCCCccccCCCCCcccccccc
Q 001380 759 ERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGSR-LLAGGDPIFPDNLFKFGDRDGMGSEVLLQ 837 (1089)
Q Consensus 759 ~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~~-~~~g~~~~~~~~l~~~g~~dg~~~~~~l~ 837 (1089)
.....++++|+++.++++-+..+.|+.++...+... .+.. +.. .
T Consensus 141 --------------~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~------------~~~---------~ 185 (304)
T 2ynn_A 141 --------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT------------GQE---------R 185 (304)
T ss_dssp --------------SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC------------CCT---------T
T ss_pred --------------CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc------------CCc---------C
Confidence 134688999854467777778899999998643321 1111 000 1
Q ss_pred CceEEEEcc--CCcEEEEeCCCCEEEEEeCCCCeE-EEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEECCCCE
Q 001380 838 HPLGVYCAK--NGQIYVADSYNHKIKKLDPASNRV-STLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADTNNNI 914 (1089)
Q Consensus 838 ~P~gva~~~--~G~lyVaD~~n~~I~~~d~~~~~v-~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~~n~~ 914 (1089)
....+++.+ ++.++++-+..+.|+.+|..++.+ .++.+. ......+++.+++.++++-..++.
T Consensus 186 ~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h--------------~~~v~~~~~~p~~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH--------------MSNVSFAVFHPTLPIIISGSEDGT 251 (304)
T ss_dssp CEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC--------------SSCEEEEEECSSSSEEEEEETTSC
T ss_pred cEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC--------------CCCEEEEEECCCCCEEEEEcCCCe
Confidence 123455544 677888888889999999887654 444432 233567888999988888888999
Q ss_pred EEEEeCCCCCceEEEEe
Q 001380 915 IRYLDLNKEEPELQTLE 931 (1089)
Q Consensus 915 I~~~~~~~~~~~~~~l~ 931 (1089)
|+.++..+.. .+.++.
T Consensus 252 i~iWd~~~~~-~~~~~~ 267 (304)
T 2ynn_A 252 LKIWNSSTYK-VEKTLN 267 (304)
T ss_dssp EEEEETTTCC-EEEEEC
T ss_pred EEEEECCCCc-eeeecc
Confidence 9999998762 344443
No 498
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.73 E-value=8.4e-06 Score=91.75 Aligned_cols=247 Identities=8% Similarity=-0.013 Sum_probs=155.1
Q ss_pred CCceEEEeecCCeEEEEeCCCCEEEEEeCC-CCEEEEEecCCCCCCCCCCCCccccCCcceeEEeeCCCEEEEEECCCCE
Q 001380 602 FPGKLAIDILNNRLFISDSNHNRIVVTDLD-GNFIVQIGSSGEEGLRDGSFDDATFNRPQGLAYNAKKNLLYVADTENHA 680 (1089)
Q Consensus 602 ~P~~vavd~~~g~L~vsd~~~~~I~~~~~~-g~~~~~i~~~g~~g~~dG~~~~~~f~~P~gla~d~~g~~lyVaD~~n~~ 680 (1089)
....+++++ +++++++-..++.|.+++.. ++.+..+... . .....++++++++.|+.+. .++.
T Consensus 34 ~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~-------------~~v~~~~~~~~~~~l~s~~-~dg~ 97 (369)
T 3zwl_B 34 PLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGH-T-------------GTIWSIDVDCFTKYCVTGS-ADYS 97 (369)
T ss_dssp CEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCC-S-------------SCEEEEEECTTSSEEEEEE-TTTE
T ss_pred eEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhc-C-------------CcEEEEEEcCCCCEEEEEe-CCCe
Confidence 345688887 56666665667899999865 7777666533 1 2457899999999655554 5789
Q ss_pred EEEEECCCCeEEEEecCCCCCCCCCCCCcccccccCCceeEEEecCCCEEEEEECC----CcEEEEEECCCCe----EEE
Q 001380 681 LREIDFVNDTVRTLAGNGTKGSDYQGGEKGTSQLLNSPWDVCYKPINEKVYIAMAG----QHQIWEHSTVDGV----TRA 752 (1089)
Q Consensus 681 I~~~d~~~g~v~~~ag~g~~~~~~~~~~~~~~~~l~~P~~la~~~~g~~lyvad~~----~~~I~~~~~~~g~----~~~ 752 (1089)
|+.+|+.++......... .....++++|++..++++... .+.|..|+...+. ...
T Consensus 98 i~iwd~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 98 IKLWDVSNGQCVATWKSP-----------------VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp EEEEETTTCCEEEEEECS-----------------SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred EEEEECCCCcEEEEeecC-----------------CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 999999877655443211 256889999999777766543 2677777654321 111
Q ss_pred EeCCCccccCCCCCCCCccccCCceEEEcCCCCEEEEEeCCCCeEEEEEcCCCCe-E-EEecCCCCCCCCccccCCCCCc
Q 001380 753 FSGDGYERNLNGSSSLNTSFAQPSGISLSPDFMEIYVADSESSSIRALNLKTGGS-R-LLAGGDPIFPDNLFKFGDRDGM 830 (1089)
Q Consensus 753 ~~g~g~~~~~~g~~~~~~~~~~P~glav~~~g~~lyvad~~~~~I~~~~~~~~~~-~-~~~g~~~~~~~~l~~~g~~dg~ 830 (1089)
...... ... ...........++++++++.|+++. ..+.|+.++..++.. . .+.+.
T Consensus 161 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~----------------- 217 (369)
T 3zwl_B 161 VSEEPI-HKI----ITHEGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNYEYVDSIDLH----------------- 217 (369)
T ss_dssp ECSSCS-EEE----ECCTTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTTEEEEEEECC-----------------
T ss_pred ccccee-eec----cCCcCccceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCcEeEEEEecC-----------------
Confidence 110000 000 0001122567899999986665554 568999999886322 2 22111
Q ss_pred cccccccCceEEEEccCCcEEEEeCCCCEEEEEeCCCCeEEEEeccCCCCCCCCcccccccCCCceEEEccCCcEEEEEC
Q 001380 831 GSEVLLQHPLGVYCAKNGQIYVADSYNHKIKKLDPASNRVSTLAGIGKAGFKDGAALAAQLSEPAGIIEAQNGNLFIADT 910 (1089)
Q Consensus 831 ~~~~~l~~P~gva~~~~G~lyVaD~~n~~I~~~d~~~~~v~t~~g~g~~g~~~g~~~~~~l~~P~gi~vd~~G~lyVad~ 910 (1089)
-....+++++++|+.+++-+.++.|+.+|..++.+...... -.....+++.++|+.+++..
T Consensus 218 -----~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 218 -----EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET--------------DCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp -----SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--------------SSCEEEEEECSSSSEEEEEE
T ss_pred -----CCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC--------------CCCceeEEecCCCceEEEee
Confidence 12357889999998778777889999999887665443321 12356788888887544444
Q ss_pred CCC--------------EEEEEeCCCC
Q 001380 911 NNN--------------IIRYLDLNKE 923 (1089)
Q Consensus 911 ~n~--------------~I~~~~~~~~ 923 (1089)
..+ .|+.++....
T Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 279 GQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp CCC-------------CEEEEEETTTC
T ss_pred cCCCceEEEEecCCCcceeEEEecCCC
Confidence 444 6677776655
No 499
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=98.72 E-value=7.6e-09 Score=109.90 Aligned_cols=84 Identities=14% Similarity=0.245 Sum_probs=62.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCC----hHhHHHHHHHCCCCCCCcc-EEEEcCCccCCCCCHHHHHHHHHHcCCC
Q 001380 164 GIGFPGALELINQCKSKGLKVAVASSAD----RIKVDANLAAAGLPVSMFD-AIVSADAFENLKPAPDIFLSASKILNVP 238 (1089)
Q Consensus 164 ~~~~pG~~~lL~~Lk~~Gi~vaIvSn~~----~~~~~~~l~~~gl~~~~fd-~i~~~~~~~~~KP~~~~~~~~l~~lgv~ 238 (1089)
.+++||+.++|+.|+++|++++|+||+. ++.+...|+++|+. .+++ .++.... ++........+++.|.
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~-~~~~~~Lilr~~----~~~K~~~r~~L~~~gy- 173 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT-GVNDKTLLLKKD----KSNKSVRFKQVEDMGY- 173 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC-CCSTTTEEEESS----CSSSHHHHHHHHTTTC-
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC-ccccceeEecCC----CCChHHHHHHHHhcCC-
Confidence 3789999999999999999999999974 46889999999996 5553 3443321 2223444444444454
Q ss_pred CCcEEEEcCChhhHHH
Q 001380 239 TSECIVIEDALAGVQA 254 (1089)
Q Consensus 239 p~~~v~VGD~~~Di~a 254 (1089)
..+++|||..+|+.+
T Consensus 174 -~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 174 -DIVLFVGDNLNDFGD 188 (260)
T ss_dssp -EEEEEEESSGGGGCG
T ss_pred -CEEEEECCChHHcCc
Confidence 449999999999998
No 500
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.71 E-value=3.6e-08 Score=112.55 Aligned_cols=89 Identities=18% Similarity=0.131 Sum_probs=74.9
Q ss_pred CCCEEEEEEecCCCcchhhhh------hhHHHHHHHcCCCCEEEEEEeCCCCCChhcHHHHHHHHHHcCCccceeecCCh
Q 001380 452 KGKVVVLDFWTYCCINCMHVL------PDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLEAIRNAVLRYGISHPVVNDGDM 525 (1089)
Q Consensus 452 ~gk~vll~Fwa~wC~~C~~~~------p~l~~l~~~~~~~~v~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~ 525 (1089)
.++++||+|||+||++|.... |.+.++++++++.++.+..|.+ +.+.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~---------------------------~~~~ 81 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDS---------------------------EKDA 81 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEET---------------------------TTTH
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeC---------------------------cccH
Confidence 468999999999999984332 6888999988876799999965 5567
Q ss_pred hHHHHhCCCceeEEEEECCCCcEEEEecCCCchhhHHHHHHHHH
Q 001380 526 NLWRELGVNSWPTFAVVGPNGKLLAQLAGEGHRKDLDDLVEAAL 569 (1089)
Q Consensus 526 ~l~~~~~v~~~Pt~~lid~~G~i~~~~~G~~~~~~l~~~l~~~l 569 (1089)
+++++|+|.++||++++ ++|+.+ .+.|..+.+.+.++|...+
T Consensus 82 ~l~~~~~V~~~PTl~~f-~~G~~~-~y~G~~~~~~i~~~i~~~~ 123 (367)
T 3us3_A 82 AVAKKLGLTEEDSIYVF-KEDEVI-EYDGEFSADTLVEFLLDVL 123 (367)
T ss_dssp HHHHHHTCCSTTEEEEE-ETTEEE-ECCSCCSHHHHHHHHHHHH
T ss_pred HHHHHcCCCcCceEEEE-ECCcEE-EeCCCCCHHHHHHHHHHhc
Confidence 89999999999999999 578875 7889999999999887765
Done!