Query 001384
Match_columns 1088
No_of_seqs 1019 out of 6641
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 23:26:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001384.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001384hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-111 5E-116 1092.5 71.4 919 31-1085 26-953 (968)
2 PLN00113 leucine-rich repeat r 100.0 1E-57 2.2E-62 591.7 35.2 508 103-694 69-584 (968)
3 KOG1187 Serine/threonine prote 100.0 1.5E-46 3.3E-51 421.8 27.7 286 791-1085 61-354 (361)
4 KOG0581 Mitogen-activated prot 100.0 2.2E-45 4.9E-50 385.3 17.0 257 793-1078 74-334 (364)
5 KOG0192 Tyrosine kinase specif 100.0 1.7E-43 3.6E-48 393.4 24.4 253 809-1086 45-306 (362)
6 KOG0595 Serine/threonine-prote 100.0 1E-43 2.2E-48 375.1 19.4 202 804-1014 9-219 (429)
7 KOG0575 Polo-like serine/threo 100.0 2.7E-43 5.9E-48 390.4 23.3 247 805-1078 18-268 (592)
8 KOG0197 Tyrosine kinases [Sign 100.0 1.7E-43 3.6E-48 389.2 16.6 254 807-1086 208-464 (468)
9 KOG0615 Serine/threonine prote 100.0 1.4E-43 3E-48 372.9 14.5 250 803-1078 170-436 (475)
10 KOG0598 Ribosomal protein S6 k 100.0 8.1E-43 1.8E-47 366.1 16.0 242 804-1071 24-269 (357)
11 KOG1026 Nerve growth factor re 100.0 1.8E-42 3.9E-47 399.0 14.4 256 806-1086 487-765 (774)
12 KOG0591 NIMA (never in mitosis 100.0 6.4E-43 1.4E-47 349.4 8.2 253 806-1082 20-284 (375)
13 KOG0592 3-phosphoinositide-dep 100.0 1.4E-41 3.1E-46 369.5 18.9 252 802-1078 70-337 (604)
14 KOG0616 cAMP-dependent protein 100.0 2.3E-40 5.1E-45 334.3 18.9 236 806-1071 45-284 (355)
15 KOG0593 Predicted protein kina 100.0 5.8E-41 1.3E-45 338.9 14.3 265 805-1078 2-283 (396)
16 KOG0661 MAPK related serine/th 100.0 1.1E-40 2.4E-45 357.1 13.1 266 804-1079 9-291 (538)
17 KOG0198 MEKK and related serin 100.0 1.4E-39 3.1E-44 350.0 19.5 252 805-1079 17-276 (313)
18 KOG0583 Serine/threonine prote 100.0 5.4E-39 1.2E-43 361.4 23.8 249 802-1077 14-273 (370)
19 KOG0196 Tyrosine kinase, EPH ( 100.0 4.7E-40 1E-44 369.4 14.6 257 807-1088 631-896 (996)
20 KOG0597 Serine-threonine prote 100.0 1E-39 2.2E-44 354.0 15.9 246 805-1078 2-250 (808)
21 KOG0600 Cdc2-related protein k 100.0 1.6E-39 3.4E-44 350.9 16.7 266 805-1078 117-399 (560)
22 KOG0578 p21-activated serine/t 100.0 2E-39 4.3E-44 356.9 17.4 249 805-1078 273-522 (550)
23 KOG0588 Serine/threonine prote 100.0 4.8E-39 1E-43 356.6 18.5 246 805-1078 12-262 (786)
24 KOG0605 NDR and related serine 100.0 7.5E-39 1.6E-43 349.2 19.3 246 804-1072 140-435 (550)
25 KOG0659 Cdk activating kinase 100.0 1.9E-38 4.1E-43 315.9 19.1 266 805-1079 2-281 (318)
26 KOG0582 Ste20-like serine/thre 100.0 4.8E-38 1E-42 334.2 22.7 259 804-1078 25-292 (516)
27 KOG0193 Serine/threonine prote 100.0 4.5E-39 9.8E-44 354.2 15.0 264 798-1085 385-655 (678)
28 KOG1095 Protein tyrosine kinas 100.0 3.2E-39 7E-44 385.9 14.8 258 805-1087 692-965 (1025)
29 KOG0694 Serine/threonine prote 100.0 1.3E-38 2.8E-43 357.0 17.1 243 804-1073 367-613 (694)
30 KOG0611 Predicted serine/threo 100.0 9.2E-39 2E-43 333.0 14.7 246 804-1078 52-302 (668)
31 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.9E-38 1.3E-42 357.8 21.6 260 804-1086 6-337 (338)
32 KOG0201 Serine/threonine prote 100.0 3.5E-39 7.5E-44 343.3 10.5 248 805-1078 13-262 (467)
33 KOG4721 Serine/threonine prote 100.0 1.3E-38 2.9E-43 344.7 11.9 239 810-1082 129-367 (904)
34 KOG0585 Ca2+/calmodulin-depend 100.0 1.8E-37 3.8E-42 331.7 19.1 253 802-1078 94-371 (576)
35 KOG0194 Protein tyrosine kinas 100.0 4.6E-38 9.9E-43 352.9 15.1 254 806-1086 158-423 (474)
36 KOG3653 Transforming growth fa 100.0 6.2E-37 1.3E-41 328.1 22.9 268 807-1084 212-504 (534)
37 KOG1094 Discoidin domain recep 100.0 3E-37 6.4E-42 336.1 19.4 261 804-1083 537-804 (807)
38 KOG0580 Serine/threonine prote 100.0 9.8E-38 2.1E-42 306.6 13.6 246 805-1079 22-273 (281)
39 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.2E-37 1.6E-41 336.4 21.7 255 805-1084 5-266 (266)
40 KOG2052 Activin A type IB rece 100.0 8.1E-37 1.8E-41 324.7 20.9 265 805-1086 211-506 (513)
41 PHA02988 hypothetical protein; 100.0 1.2E-36 2.6E-41 337.1 22.7 246 811-1084 26-280 (283)
42 KOG4257 Focal adhesion tyrosin 100.0 2E-37 4.4E-42 338.8 16.0 256 804-1085 388-651 (974)
43 KOG0589 Serine/threonine prote 100.0 1.3E-37 2.8E-42 342.2 13.8 249 805-1079 4-258 (426)
44 KOG0472 Leucine-rich repeat pr 100.0 3E-41 6.6E-46 352.3 -15.2 489 82-692 48-562 (565)
45 cd06649 PKc_MEK2 Catalytic dom 100.0 5.5E-36 1.2E-40 340.0 26.1 267 804-1079 4-301 (331)
46 cd07848 STKc_CDKL5 Catalytic d 100.0 1.9E-36 4.1E-41 337.2 21.9 267 805-1078 1-283 (287)
47 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-36 2.4E-41 339.3 19.9 244 805-1078 1-253 (291)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1.6E-36 3.5E-41 337.1 21.0 246 807-1078 2-260 (285)
49 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-36 3.2E-41 349.9 21.4 258 804-1084 34-375 (375)
50 KOG0663 Protein kinase PITSLRE 100.0 2.2E-36 4.8E-41 310.0 19.5 265 805-1078 76-360 (419)
51 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3E-36 6.5E-41 329.5 21.7 250 805-1080 4-255 (256)
52 cd05096 PTKc_DDR1 Catalytic do 100.0 5.3E-36 1.1E-40 336.4 23.8 259 805-1082 5-304 (304)
53 cd05571 STKc_PKB Catalytic dom 100.0 2.1E-36 4.6E-41 342.2 20.4 241 811-1078 1-250 (323)
54 PTZ00263 protein kinase A cata 100.0 1.9E-36 4.1E-41 343.3 19.8 243 805-1077 18-269 (329)
55 cd05106 PTKc_CSF-1R Catalytic 100.0 2.3E-36 5E-41 347.9 20.4 257 805-1084 38-373 (374)
56 KOG0610 Putative serine/threon 100.0 2.2E-36 4.7E-41 319.5 18.3 249 806-1078 78-391 (459)
57 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.5E-36 7.5E-41 342.2 21.5 253 805-1079 1-257 (333)
58 cd05068 PTKc_Frk_like Catalyti 100.0 6.8E-36 1.5E-40 327.8 22.9 254 804-1083 5-261 (261)
59 KOG0033 Ca2+/calmodulin-depend 100.0 1.3E-37 2.7E-42 305.1 8.0 250 803-1078 9-266 (355)
60 cd05072 PTKc_Lyn Catalytic dom 100.0 4.8E-36 1E-40 329.0 21.5 252 805-1083 6-261 (261)
61 KOG0658 Glycogen synthase kina 100.0 4E-37 8.7E-42 322.3 11.9 258 806-1078 25-305 (364)
62 KOG0660 Mitogen-activated prot 100.0 3.5E-36 7.6E-41 314.7 18.5 265 803-1078 20-309 (359)
63 cd05614 STKc_MSK2_N N-terminal 100.0 3.7E-36 8.1E-41 342.0 19.4 250 806-1078 1-266 (332)
64 cd05052 PTKc_Abl Catalytic dom 100.0 8.5E-36 1.8E-40 327.4 21.4 253 806-1084 7-263 (263)
65 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-35 2.6E-40 342.8 23.7 259 804-1085 36-399 (400)
66 PTZ00426 cAMP-dependent protei 100.0 4.9E-36 1.1E-40 340.4 19.9 244 805-1078 30-283 (340)
67 cd05595 STKc_PKB_beta Catalyti 100.0 8.9E-36 1.9E-40 336.9 21.7 241 811-1078 1-250 (323)
68 KOG1989 ARK protein kinase fam 100.0 4E-36 8.6E-41 348.8 19.1 256 805-1085 37-313 (738)
69 cd06650 PKc_MEK1 Catalytic dom 100.0 2.1E-35 4.5E-40 335.2 24.7 266 804-1078 4-298 (333)
70 PTZ00267 NIMA-related protein 100.0 1.1E-35 2.4E-40 352.8 23.4 248 806-1078 68-322 (478)
71 cd05093 PTKc_TrkB Catalytic do 100.0 9.6E-36 2.1E-40 331.5 21.4 258 805-1087 5-283 (288)
72 KOG0599 Phosphorylase kinase g 100.0 2E-36 4.3E-41 301.0 13.9 254 802-1078 14-282 (411)
73 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-35 2.7E-40 329.9 21.8 253 806-1083 6-283 (283)
74 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.3E-36 1.4E-40 328.1 19.0 254 804-1083 5-261 (261)
75 cd05585 STKc_YPK1_like Catalyt 100.0 7.2E-36 1.6E-40 336.2 19.9 238 813-1077 1-245 (312)
76 PF07714 Pkinase_Tyr: Protein 100.0 2.9E-36 6.2E-41 329.9 16.0 247 809-1080 3-259 (259)
77 cd05033 PTKc_EphR Catalytic do 100.0 2.1E-35 4.5E-40 324.9 22.8 255 805-1084 4-266 (266)
78 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.7E-35 5.8E-40 327.7 23.7 265 805-1078 5-284 (288)
79 cd05071 PTKc_Src Catalytic dom 100.0 2.7E-35 5.8E-40 323.1 23.3 253 805-1084 6-261 (262)
80 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.5E-35 3.3E-40 323.8 21.3 250 806-1081 5-256 (256)
81 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-35 2.7E-40 336.2 21.0 241 811-1078 1-250 (328)
82 cd05059 PTKc_Tec_like Catalyti 100.0 2.2E-35 4.8E-40 322.7 22.0 249 806-1080 5-255 (256)
83 cd05592 STKc_nPKC_theta_delta 100.0 1.2E-35 2.6E-40 334.7 20.4 241 811-1077 1-246 (316)
84 PHA03212 serine/threonine kina 100.0 3.8E-35 8.2E-40 338.7 25.0 261 804-1078 91-375 (391)
85 KOG4194 Membrane glycoprotein 100.0 1.6E-37 3.6E-42 337.8 4.8 362 104-469 79-447 (873)
86 cd05626 STKc_LATS2 Catalytic d 100.0 2.7E-35 5.8E-40 340.9 23.5 251 806-1078 2-304 (381)
87 cd05094 PTKc_TrkC Catalytic do 100.0 2.1E-35 4.6E-40 329.3 21.8 256 805-1086 5-285 (291)
88 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-35 3.8E-40 328.2 20.8 253 805-1082 5-280 (280)
89 KOG0472 Leucine-rich repeat pr 100.0 9E-40 1.9E-44 341.3 -12.6 424 245-695 92-542 (565)
90 cd05587 STKc_cPKC Catalytic do 100.0 2.6E-35 5.7E-40 333.5 22.6 242 806-1073 1-246 (324)
91 cd05590 STKc_nPKC_eta Catalyti 100.0 2E-35 4.3E-40 333.6 21.0 237 811-1073 1-241 (320)
92 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-35 2.5E-40 340.8 19.3 251 805-1078 1-284 (350)
93 KOG0032 Ca2+/calmodulin-depend 100.0 6.4E-35 1.4E-39 327.7 24.7 252 803-1078 33-292 (382)
94 cd05589 STKc_PKN Catalytic dom 100.0 2.5E-35 5.3E-40 333.8 21.6 247 807-1078 1-256 (324)
95 KOG4194 Membrane glycoprotein 100.0 2.1E-37 4.5E-42 337.0 4.4 363 80-447 79-449 (873)
96 cd05599 STKc_NDR_like Catalyti 100.0 2.1E-35 4.6E-40 340.3 21.4 251 805-1078 1-295 (364)
97 cd05584 STKc_p70S6K Catalytic 100.0 2.7E-35 5.9E-40 333.1 21.8 241 811-1078 2-255 (323)
98 cd05616 STKc_cPKC_beta Catalyt 100.0 2.9E-35 6.2E-40 333.1 21.9 242 806-1073 1-246 (323)
99 cd05628 STKc_NDR1 Catalytic do 100.0 4.7E-35 1E-39 336.7 24.0 203 805-1014 1-241 (363)
100 KOG4717 Serine/threonine prote 100.0 1.4E-35 3E-40 317.6 18.0 246 805-1078 18-269 (864)
101 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.7E-35 1E-39 320.9 22.9 251 805-1082 6-259 (260)
102 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.4E-35 1.2E-39 328.0 23.8 266 804-1078 4-287 (303)
103 cd05591 STKc_nPKC_epsilon Cata 100.0 2.6E-35 5.7E-40 333.1 20.8 242 811-1078 1-253 (321)
104 KOG2345 Serine/threonine prote 100.0 5.5E-36 1.2E-40 295.4 13.1 262 803-1084 19-301 (302)
105 cd05054 PTKc_VEGFR Catalytic d 100.0 2.5E-35 5.4E-40 334.7 20.6 258 805-1085 7-335 (337)
106 cd07862 STKc_CDK6 Catalytic do 100.0 4.9E-35 1.1E-39 326.4 22.6 267 805-1078 1-286 (290)
107 KOG0594 Protein kinase PCTAIRE 100.0 5.6E-35 1.2E-39 307.6 21.4 266 805-1079 11-302 (323)
108 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.7E-35 5.8E-40 336.3 20.7 265 806-1078 1-289 (338)
109 cd08228 STKc_Nek6 Catalytic do 100.0 1.6E-34 3.6E-39 318.0 26.3 257 805-1084 2-266 (267)
110 cd05062 PTKc_IGF-1R Catalytic 100.0 3.7E-35 7.9E-40 325.0 20.9 255 803-1082 4-277 (277)
111 KOG4278 Protein tyrosine kinas 100.0 4.3E-36 9.3E-41 327.4 13.0 258 803-1086 265-526 (1157)
112 cd05619 STKc_nPKC_theta Cataly 100.0 5.8E-35 1.3E-39 328.9 22.8 241 811-1077 1-246 (316)
113 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.7E-35 1.2E-39 320.2 22.1 252 804-1082 5-259 (260)
114 cd05108 PTKc_EGFR Catalytic do 100.0 4E-35 8.7E-40 331.0 21.4 255 805-1085 7-270 (316)
115 cd06646 STKc_MAP4K5 Catalytic 100.0 5.9E-35 1.3E-39 321.5 22.2 253 805-1079 9-265 (267)
116 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-35 4.2E-40 334.7 18.3 241 811-1078 1-251 (325)
117 cd05601 STKc_CRIK Catalytic do 100.0 2.3E-35 5E-40 335.1 18.9 251 805-1078 1-262 (330)
118 cd05588 STKc_aPKC Catalytic do 100.0 2.9E-35 6.3E-40 333.6 19.5 240 811-1073 1-250 (329)
119 cd05618 STKc_aPKC_iota Catalyt 100.0 3E-35 6.6E-40 333.2 19.6 240 811-1073 1-250 (329)
120 cd05620 STKc_nPKC_delta Cataly 100.0 5.2E-35 1.1E-39 329.6 21.4 241 811-1077 1-246 (316)
121 cd05625 STKc_LATS1 Catalytic d 100.0 4.5E-35 9.8E-40 339.5 21.4 250 806-1078 2-304 (382)
122 PTZ00283 serine/threonine prot 100.0 4.8E-35 1E-39 347.2 22.0 252 803-1079 30-297 (496)
123 cd05570 STKc_PKC Catalytic dom 100.0 6.6E-35 1.4E-39 329.2 21.7 242 811-1078 1-251 (318)
124 cd05090 PTKc_Ror1 Catalytic do 100.0 8.5E-35 1.8E-39 323.1 22.3 252 805-1082 5-282 (283)
125 cd05598 STKc_LATS Catalytic do 100.0 3.6E-35 7.8E-40 339.7 20.1 251 805-1078 1-300 (376)
126 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1E-34 2.2E-39 322.6 22.8 268 806-1084 4-282 (283)
127 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9.8E-35 2.1E-39 322.9 22.7 269 805-1083 4-283 (284)
128 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-34 3.1E-39 317.1 23.6 251 805-1082 6-259 (260)
129 cd05084 PTKc_Fes Catalytic dom 100.0 9.3E-35 2E-39 317.0 22.0 247 811-1082 1-252 (252)
130 PLN00034 mitogen-activated pro 100.0 4.3E-35 9.2E-40 335.9 20.2 247 806-1079 75-328 (353)
131 cd05034 PTKc_Src_like Catalyti 100.0 9.7E-35 2.1E-39 318.6 22.1 253 804-1082 5-260 (261)
132 cd05629 STKc_NDR_like_fungal C 100.0 6E-35 1.3E-39 337.9 21.5 251 805-1078 1-304 (377)
133 cd05608 STKc_GRK1 Catalytic do 100.0 6.7E-35 1.5E-39 323.1 20.9 241 813-1078 1-256 (280)
134 cd06625 STKc_MEKK3_like Cataly 100.0 3E-34 6.5E-39 315.1 25.8 251 805-1079 2-260 (263)
135 cd08229 STKc_Nek7 Catalytic do 100.0 1.9E-34 4.2E-39 317.4 24.2 257 805-1084 2-266 (267)
136 cd05621 STKc_ROCK2 Catalytic d 100.0 7.3E-35 1.6E-39 334.6 21.7 254 803-1079 41-304 (370)
137 cd05605 STKc_GRK4_like Catalyt 100.0 6.2E-35 1.3E-39 324.3 20.3 247 806-1078 1-260 (285)
138 cd05089 PTKc_Tie1 Catalytic do 100.0 7.1E-35 1.5E-39 326.0 20.9 255 805-1085 2-277 (297)
139 cd05596 STKc_ROCK Catalytic do 100.0 9.4E-35 2E-39 334.2 22.5 252 804-1078 42-303 (370)
140 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-34 2.5E-39 317.2 22.0 247 812-1084 2-256 (257)
141 cd05615 STKc_cPKC_alpha Cataly 100.0 8.9E-35 1.9E-39 328.7 21.8 242 806-1073 1-246 (323)
142 cd05092 PTKc_TrkA Catalytic do 100.0 9.8E-35 2.1E-39 322.0 21.3 253 805-1082 5-280 (280)
143 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-34 3E-39 322.6 22.6 255 806-1086 1-289 (290)
144 KOG1025 Epidermal growth facto 100.0 3.1E-35 6.8E-40 331.3 17.1 253 807-1085 698-959 (1177)
145 PRK13184 pknD serine/threonine 100.0 2.1E-34 4.5E-39 348.3 25.5 258 805-1085 2-292 (932)
146 cd05039 PTKc_Csk_like Catalyti 100.0 1.7E-34 3.6E-39 315.8 22.5 248 805-1083 6-256 (256)
147 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.3E-35 1.6E-39 330.0 20.3 241 811-1074 1-249 (327)
148 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-34 2.5E-39 334.5 22.2 258 804-1084 36-400 (401)
149 cd05035 PTKc_Axl_like Catalyti 100.0 1.6E-34 3.6E-39 319.1 22.6 253 807-1084 1-273 (273)
150 cd05575 STKc_SGK Catalytic dom 100.0 4.4E-35 9.6E-40 331.5 18.2 238 811-1074 1-242 (323)
151 cd05063 PTKc_EphR_A2 Catalytic 100.0 2E-34 4.3E-39 317.5 22.9 255 805-1084 5-268 (268)
152 cd05088 PTKc_Tie2 Catalytic do 100.0 6.5E-35 1.4E-39 327.1 19.3 255 805-1085 7-282 (303)
153 cd05111 PTK_HER3 Pseudokinase 100.0 2E-34 4.3E-39 319.3 22.9 254 805-1085 7-270 (279)
154 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.5E-35 1.8E-39 327.0 20.2 258 805-1086 18-302 (307)
155 cd05053 PTKc_FGFR Catalytic do 100.0 6E-35 1.3E-39 326.2 18.8 257 804-1084 11-292 (293)
156 cd05060 PTKc_Syk_like Catalyti 100.0 2.3E-34 5E-39 314.8 22.9 248 811-1084 1-256 (257)
157 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.1E-34 1.8E-38 312.4 27.2 256 805-1084 2-266 (267)
158 cd05066 PTKc_EphR_A Catalytic 100.0 1.6E-34 3.5E-39 317.9 21.6 255 805-1084 4-267 (267)
159 cd05075 PTKc_Axl Catalytic dom 100.0 2.1E-34 4.5E-39 318.1 22.5 253 807-1084 1-272 (272)
160 cd05582 STKc_RSK_N N-terminal 100.0 2.6E-35 5.6E-40 332.8 15.6 238 811-1075 2-245 (318)
161 cd05085 PTKc_Fer Catalytic dom 100.0 2.2E-34 4.8E-39 313.6 22.4 246 811-1081 1-249 (250)
162 cd05061 PTKc_InsR Catalytic do 100.0 2E-34 4.4E-39 320.8 22.1 257 803-1084 4-279 (288)
163 cd05602 STKc_SGK1 Catalytic do 100.0 4.5E-35 9.8E-40 331.7 17.1 241 811-1078 1-246 (325)
164 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-34 3.3E-39 324.6 21.2 258 804-1085 14-298 (304)
165 cd05604 STKc_SGK3 Catalytic do 100.0 5.6E-35 1.2E-39 331.0 17.8 241 811-1077 1-245 (325)
166 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.7E-34 3.6E-39 319.7 20.8 254 804-1082 5-277 (277)
167 cd05622 STKc_ROCK1 Catalytic d 100.0 2.1E-34 4.6E-39 331.2 22.4 257 800-1079 38-304 (371)
168 cd08529 STKc_FA2-like Catalyti 100.0 3.3E-34 7.2E-39 313.4 22.8 248 806-1079 1-253 (256)
169 cd05055 PTKc_PDGFR Catalytic d 100.0 2.2E-34 4.8E-39 322.5 21.8 257 805-1084 35-302 (302)
170 cd07853 STKc_NLK Catalytic dom 100.0 3.8E-34 8.3E-39 330.5 24.3 263 806-1078 1-287 (372)
171 KOG0574 STE20-like serine/thre 100.0 1.8E-36 4E-41 304.5 4.1 246 807-1078 35-282 (502)
172 cd05112 PTKc_Itk Catalytic dom 100.0 3.2E-34 6.8E-39 313.6 22.2 250 805-1080 4-255 (256)
173 cd05607 STKc_GRK7 Catalytic do 100.0 1.9E-34 4.2E-39 318.9 20.7 241 813-1078 1-249 (277)
174 cd06654 STKc_PAK1 Catalytic do 100.0 5.4E-34 1.2E-38 318.5 24.4 250 805-1079 20-270 (296)
175 cd05056 PTKc_FAK Catalytic dom 100.0 2.9E-34 6.2E-39 316.6 21.8 255 805-1085 6-267 (270)
176 cd07876 STKc_JNK2 Catalytic do 100.0 4.3E-34 9.4E-39 328.5 24.2 263 803-1078 19-314 (359)
177 cd05115 PTKc_Zap-70 Catalytic 100.0 3.6E-34 7.8E-39 313.1 22.3 247 812-1084 2-256 (257)
178 cd05043 PTK_Ryk Pseudokinase d 100.0 2.5E-34 5.4E-39 318.9 21.2 258 804-1086 5-279 (280)
179 cd05047 PTKc_Tie Catalytic dom 100.0 3.4E-34 7.3E-39 315.9 22.0 249 811-1085 1-270 (270)
180 cd05082 PTKc_Csk Catalytic dom 100.0 3.3E-34 7.2E-39 313.4 21.7 247 805-1083 6-256 (256)
181 KOG0667 Dual-specificity tyros 100.0 1.2E-34 2.5E-39 326.0 18.3 200 806-1014 187-393 (586)
182 cd05073 PTKc_Hck Catalytic dom 100.0 3.9E-34 8.3E-39 313.6 22.1 251 804-1082 5-259 (260)
183 KOG4279 Serine/threonine prote 100.0 2.8E-35 6E-40 325.0 12.9 243 811-1078 581-831 (1226)
184 KOG0199 ACK and related non-re 100.0 3.1E-35 6.7E-40 325.9 13.2 247 807-1079 112-368 (1039)
185 cd05032 PTKc_InsR_like Catalyt 100.0 2.2E-34 4.8E-39 318.8 20.2 252 805-1082 6-277 (277)
186 cd05597 STKc_DMPK_like Catalyt 100.0 4E-34 8.6E-39 324.6 22.6 254 805-1079 1-266 (331)
187 cd05065 PTKc_EphR_B Catalytic 100.0 3.1E-34 6.7E-39 316.1 20.9 253 806-1084 5-269 (269)
188 cd05603 STKc_SGK2 Catalytic do 100.0 9.3E-35 2E-39 328.7 17.2 237 811-1074 1-242 (321)
189 cd05091 PTKc_Ror2 Catalytic do 100.0 2.1E-34 4.6E-39 320.0 19.7 252 806-1082 6-282 (283)
190 cd05109 PTKc_HER2 Catalytic do 100.0 4.9E-34 1.1E-38 316.3 22.4 254 805-1085 7-270 (279)
191 cd05050 PTKc_Musk Catalytic do 100.0 3.2E-34 6.8E-39 319.5 20.7 254 804-1082 4-288 (288)
192 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-34 5.5E-39 330.4 20.4 250 805-1077 1-291 (360)
193 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.8E-34 1E-38 317.2 21.9 269 806-1084 5-284 (284)
194 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.5E-34 7.6E-39 323.0 21.0 257 805-1085 12-295 (314)
195 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.7E-34 1.5E-38 313.1 22.6 248 806-1078 1-263 (267)
196 cd00192 PTKc Catalytic domain 100.0 4.9E-34 1.1E-38 313.0 21.4 246 811-1081 1-262 (262)
197 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.8E-34 8.3E-39 326.4 21.1 259 805-1086 7-342 (343)
198 PTZ00036 glycogen synthase kin 100.0 3.6E-34 7.8E-39 336.0 21.4 260 804-1078 65-350 (440)
199 cd07863 STKc_CDK4 Catalytic do 100.0 7.3E-34 1.6E-38 316.6 22.9 266 806-1078 1-284 (288)
200 cd05097 PTKc_DDR_like Catalyti 100.0 6.5E-34 1.4E-38 318.0 22.5 259 805-1082 5-295 (295)
201 cd06615 PKc_MEK Catalytic doma 100.0 1.8E-33 3.8E-38 316.3 26.0 264 805-1079 1-287 (308)
202 cd05051 PTKc_DDR Catalytic dom 100.0 9.6E-34 2.1E-38 317.0 23.6 260 804-1082 4-296 (296)
203 cd06645 STKc_MAP4K3 Catalytic 100.0 6.2E-34 1.3E-38 313.4 21.7 252 805-1078 9-264 (267)
204 cd08219 STKc_Nek3 Catalytic do 100.0 5.4E-34 1.2E-38 311.5 21.1 248 806-1079 1-252 (255)
205 cd06613 STKc_MAP4K3_like Catal 100.0 1.9E-33 4.1E-38 308.6 25.3 252 805-1078 3-259 (262)
206 PF00069 Pkinase: Protein kina 100.0 2.8E-34 6E-39 314.7 18.1 251 807-1078 1-256 (260)
207 KOG0584 Serine/threonine prote 100.0 1.2E-34 2.7E-39 322.0 14.8 244 809-1078 44-295 (632)
208 cd07874 STKc_JNK3 Catalytic do 100.0 8.2E-34 1.8E-38 325.8 22.1 264 803-1079 15-311 (355)
209 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.8E-33 3.9E-38 313.1 24.0 266 805-1078 1-282 (286)
210 cd05095 PTKc_DDR2 Catalytic do 100.0 1.3E-33 2.9E-38 315.6 23.0 260 805-1082 5-296 (296)
211 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.9E-34 2.2E-38 318.7 22.0 265 805-1078 6-285 (309)
212 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-33 3.4E-38 307.1 22.9 247 811-1082 1-251 (251)
213 cd05623 STKc_MRCK_alpha Cataly 100.0 8E-34 1.7E-38 322.4 21.4 254 805-1079 1-266 (332)
214 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-33 3.1E-38 312.0 22.7 254 805-1082 5-275 (275)
215 cd05624 STKc_MRCK_beta Catalyt 100.0 7E-34 1.5E-38 322.6 20.7 253 805-1078 1-265 (331)
216 cd06655 STKc_PAK2 Catalytic do 100.0 2.1E-33 4.6E-38 313.6 24.3 249 805-1078 19-268 (296)
217 cd05040 PTKc_Ack_like Catalyti 100.0 1.8E-33 3.9E-38 307.8 23.2 246 811-1081 1-256 (257)
218 PHA03207 serine/threonine kina 100.0 1.1E-33 2.3E-38 328.4 22.5 263 804-1079 91-375 (392)
219 cd05630 STKc_GRK6 Catalytic do 100.0 8.3E-34 1.8E-38 315.1 20.7 248 806-1078 1-260 (285)
220 cd05058 PTKc_Met_Ron Catalytic 100.0 1.3E-33 2.9E-38 309.8 22.1 250 811-1085 1-261 (262)
221 PTZ00284 protein kinase; Provi 100.0 6.9E-34 1.5E-38 337.7 21.2 271 800-1078 124-437 (467)
222 cd05632 STKc_GRK5 Catalytic do 100.0 9.2E-34 2E-38 314.9 20.9 246 807-1078 2-260 (285)
223 cd06631 STKc_YSK4 Catalytic do 100.0 2.6E-33 5.6E-38 308.1 24.2 250 806-1078 1-261 (265)
224 cd05586 STKc_Sck1_like Catalyt 100.0 9.6E-35 2.1E-39 330.0 13.2 243 813-1078 1-252 (330)
225 cd06619 PKc_MKK5 Catalytic dom 100.0 1.3E-33 2.9E-38 312.7 22.0 246 805-1079 1-253 (279)
226 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-33 2.6E-38 321.5 22.1 257 805-1085 12-295 (334)
227 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.4E-34 1.8E-38 315.4 20.2 269 805-1083 4-283 (284)
228 smart00219 TyrKc Tyrosine kina 100.0 1.5E-33 3.3E-38 308.5 21.8 249 807-1080 1-258 (258)
229 cd08221 STKc_Nek9 Catalytic do 100.0 2.5E-33 5.5E-38 306.4 23.6 248 806-1079 1-253 (256)
230 cd06612 STKc_MST1_2 Catalytic 100.0 2.2E-33 4.7E-38 306.9 23.0 249 804-1078 2-252 (256)
231 cd06624 STKc_ASK Catalytic dom 100.0 2.2E-33 4.7E-38 309.2 23.0 252 802-1078 5-264 (268)
232 cd06656 STKc_PAK3 Catalytic do 100.0 1.8E-33 3.8E-38 314.5 22.6 250 804-1078 18-268 (297)
233 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-33 4E-38 310.8 22.3 247 805-1078 1-250 (274)
234 cd07875 STKc_JNK1 Catalytic do 100.0 2E-33 4.4E-38 323.6 23.3 263 803-1078 22-317 (364)
235 cd08223 STKc_Nek4 Catalytic do 100.0 2.8E-33 6.2E-38 306.2 23.3 247 806-1078 1-253 (257)
236 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-33 5.3E-38 309.5 23.0 251 803-1078 4-268 (272)
237 cd06644 STKc_STK10_LOK Catalyt 100.0 4.6E-33 9.9E-38 310.7 25.3 250 805-1078 12-268 (292)
238 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.9E-33 4E-38 310.4 21.8 238 812-1081 2-274 (274)
239 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.7E-33 5.8E-38 307.1 22.9 238 811-1080 1-261 (262)
240 PTZ00266 NIMA-related protein 100.0 6.8E-34 1.5E-38 344.9 19.5 254 801-1078 9-294 (1021)
241 cd06643 STKc_SLK Catalytic dom 100.0 3.8E-33 8.3E-38 309.7 23.9 248 807-1078 7-261 (282)
242 cd05057 PTKc_EGFR_like Catalyt 100.0 2.3E-33 5E-38 310.9 22.0 255 805-1085 7-270 (279)
243 cd06640 STKc_MST4 Catalytic do 100.0 4.5E-33 9.8E-38 308.2 24.1 248 805-1079 4-253 (277)
244 cd07868 STKc_CDK8 Catalytic do 100.0 3.5E-33 7.6E-38 315.6 23.6 193 810-1012 6-219 (317)
245 cd08227 PK_STRAD_alpha Pseudok 100.0 4.3E-33 9.3E-38 316.0 24.3 263 809-1078 2-306 (327)
246 cd08218 STKc_Nek1 Catalytic do 100.0 2.7E-33 5.8E-38 306.2 21.6 247 806-1078 1-252 (256)
247 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.7E-33 3.6E-38 313.3 20.2 250 805-1078 1-261 (286)
248 cd06626 STKc_MEKK4 Catalytic d 100.0 8.9E-33 1.9E-37 303.6 25.3 251 806-1078 1-260 (264)
249 cd06638 STKc_myosinIIIA Cataly 100.0 2.7E-33 5.8E-38 311.7 21.4 260 796-1079 9-283 (286)
250 cd07833 STKc_CDKL Catalytic do 100.0 3.8E-33 8.2E-38 310.8 22.6 267 805-1078 1-284 (288)
251 cd07861 STKc_CDK1_euk Catalyti 100.0 3.7E-33 7.9E-38 310.4 22.3 264 806-1078 1-281 (285)
252 KOG0986 G protein-coupled rece 100.0 1.2E-34 2.7E-39 307.7 9.8 243 805-1073 185-435 (591)
253 cd05110 PTKc_HER4 Catalytic do 100.0 2.1E-33 4.6E-38 314.9 20.5 254 805-1085 7-270 (303)
254 cd06632 STKc_MEKK1_plant Catal 100.0 5.8E-33 1.3E-37 303.9 23.4 247 806-1078 1-254 (258)
255 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.2E-33 4.8E-38 312.3 20.4 265 805-1078 1-282 (286)
256 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5E-33 1.1E-37 311.8 23.3 265 805-1078 6-285 (301)
257 cd05083 PTKc_Chk Catalytic dom 100.0 2.6E-33 5.7E-38 305.9 20.1 245 805-1082 6-253 (254)
258 cd06651 STKc_MEKK3 Catalytic d 100.0 5.5E-33 1.2E-37 305.6 22.8 249 805-1078 2-260 (266)
259 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.8E-33 1E-37 309.2 22.5 251 805-1080 5-267 (284)
260 KOG0579 Ste20-like serine/thre 100.0 1.6E-34 3.4E-39 315.8 10.2 250 805-1078 32-288 (1187)
261 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.2E-33 2E-37 304.3 24.5 250 811-1081 1-268 (269)
262 cd06611 STKc_SLK_like Catalyti 100.0 3.9E-33 8.5E-38 309.3 21.6 252 804-1079 4-262 (280)
263 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.4E-33 3E-38 308.8 17.6 239 811-1081 1-258 (258)
264 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.5E-33 5.5E-38 310.3 19.2 246 806-1078 5-252 (277)
265 KOG0577 Serine/threonine prote 100.0 2.5E-34 5.3E-39 312.9 10.7 242 807-1078 28-277 (948)
266 cd05609 STKc_MAST Catalytic do 100.0 8.8E-33 1.9E-37 310.4 23.7 255 805-1082 1-273 (305)
267 KOG0690 Serine/threonine prote 100.0 2.1E-34 4.6E-39 292.8 9.4 240 805-1071 168-411 (516)
268 KOG0444 Cytoskeletal regulator 100.0 2.6E-36 5.6E-41 329.5 -4.9 365 197-669 6-374 (1255)
269 cd08528 STKc_Nek10 Catalytic d 100.0 7.2E-33 1.6E-37 305.3 22.4 253 806-1082 1-269 (269)
270 cd05044 PTKc_c-ros Catalytic d 100.0 4.4E-33 9.6E-38 306.9 20.6 247 811-1082 1-269 (269)
271 cd06639 STKc_myosinIIIB Cataly 100.0 9.2E-33 2E-37 308.2 23.1 260 795-1078 12-286 (291)
272 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1E-32 2.2E-37 302.2 22.9 237 811-1081 1-259 (259)
273 cd06623 PKc_MAPKK_plant_like C 100.0 9.3E-33 2E-37 303.4 22.6 251 805-1079 1-256 (264)
274 cd06652 STKc_MEKK2 Catalytic d 100.0 9.9E-33 2.1E-37 303.4 22.8 249 805-1078 2-260 (265)
275 cd05580 STKc_PKA Catalytic dom 100.0 8.8E-33 1.9E-37 308.0 22.6 243 805-1077 1-252 (290)
276 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.3E-32 2.9E-37 303.7 23.7 253 806-1078 2-268 (272)
277 cd06630 STKc_MEKK1 Catalytic d 100.0 7.3E-33 1.6E-37 305.1 21.5 251 806-1078 1-263 (268)
278 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.7E-33 1.5E-37 306.2 21.3 252 807-1083 1-272 (273)
279 KOG0604 MAP kinase-activated p 100.0 7.8E-34 1.7E-38 286.7 12.5 251 803-1078 59-321 (400)
280 cd08220 STKc_Nek8 Catalytic do 100.0 8.8E-33 1.9E-37 302.1 21.9 246 806-1078 1-252 (256)
281 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.8E-32 3.8E-37 301.8 24.1 254 805-1078 1-263 (267)
282 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4E-33 8.6E-38 318.6 19.6 261 802-1078 12-297 (343)
283 PHA03211 serine/threonine kina 100.0 1.1E-32 2.3E-37 321.5 23.4 262 804-1079 168-455 (461)
284 cd06605 PKc_MAPKK Catalytic do 100.0 8.6E-33 1.9E-37 303.9 21.4 248 805-1078 1-256 (265)
285 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.6E-33 1.6E-37 307.4 21.0 259 795-1078 6-278 (282)
286 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-32 3.1E-37 305.8 23.3 264 806-1078 1-281 (286)
287 KOG0596 Dual specificity; seri 100.0 2.8E-33 6.2E-38 304.5 16.8 252 804-1078 360-626 (677)
288 cd08217 STKc_Nek2 Catalytic do 100.0 1.4E-32 3E-37 302.1 22.4 247 806-1078 1-261 (265)
289 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-32 2.6E-37 307.7 22.0 247 807-1078 23-270 (297)
290 cd06658 STKc_PAK5 Catalytic do 100.0 6.2E-33 1.3E-37 309.2 19.6 248 807-1079 24-272 (292)
291 cd07867 STKc_CDC2L6 Catalytic 100.0 1.3E-32 2.7E-37 311.2 22.4 193 810-1012 6-219 (317)
292 PHA03209 serine/threonine kina 100.0 8.6E-33 1.9E-37 316.8 21.2 192 803-1010 64-257 (357)
293 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.9E-32 4.1E-37 304.4 22.7 250 805-1078 1-260 (283)
294 cd06608 STKc_myosinIII_like Ca 100.0 1.3E-32 2.8E-37 304.2 21.2 252 803-1078 4-271 (275)
295 KOG4645 MAPKKK (MAP kinase kin 100.0 1.7E-34 3.8E-39 341.6 6.6 251 804-1078 1234-1493(1509)
296 cd07839 STKc_CDK5 Catalytic do 100.0 8.5E-33 1.8E-37 307.3 19.8 264 806-1078 1-280 (284)
297 cd05042 PTKc_Aatyk Catalytic d 100.0 2.8E-32 6E-37 300.6 23.5 249 812-1081 2-268 (269)
298 cd07841 STKc_CDK7 Catalytic do 100.0 2.6E-32 5.7E-37 305.7 23.7 264 806-1079 1-282 (298)
299 cd05633 STKc_GRK3 Catalytic do 100.0 1.4E-32 3.1E-37 304.2 21.2 244 812-1078 1-254 (279)
300 PHA03390 pk1 serine/threonine- 100.0 5.7E-32 1.2E-36 297.3 25.8 251 797-1078 6-261 (267)
301 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.6E-32 5.7E-37 304.5 23.4 267 803-1078 3-287 (291)
302 cd06917 STKc_NAK1_like Catalyt 100.0 2.3E-32 4.9E-37 302.7 22.7 250 806-1078 2-254 (277)
303 KOG0607 MAP kinase-interacting 100.0 5.9E-34 1.3E-38 289.5 8.8 268 796-1078 74-360 (463)
304 cd06647 STKc_PAK_I Catalytic d 100.0 2.2E-32 4.9E-37 305.0 22.5 250 805-1079 19-269 (293)
305 cd05578 STKc_Yank1 Catalytic d 100.0 8.2E-33 1.8E-37 302.8 18.6 247 806-1077 1-253 (258)
306 cd06614 STKc_PAK Catalytic dom 100.0 3.5E-32 7.6E-37 302.7 23.9 251 803-1078 17-269 (286)
307 cd05574 STKc_phototropin_like 100.0 3.5E-32 7.6E-37 307.3 24.1 250 805-1078 1-288 (316)
308 cd05122 PKc_STE Catalytic doma 100.0 5.2E-32 1.1E-36 295.0 24.6 248 806-1078 1-250 (253)
309 cd06648 STKc_PAK_II Catalytic 100.0 3.6E-32 7.8E-37 302.1 23.6 247 807-1078 21-268 (285)
310 KOG0586 Serine/threonine prote 100.0 6.8E-33 1.5E-37 308.1 17.1 249 803-1079 54-306 (596)
311 cd06641 STKc_MST3 Catalytic do 100.0 4.3E-32 9.4E-37 300.3 23.6 246 806-1078 5-252 (277)
312 cd05611 STKc_Rim15_like Cataly 100.0 4.2E-32 9.2E-37 297.5 23.2 243 811-1079 2-248 (260)
313 KOG0612 Rho-associated, coiled 100.0 1.2E-33 2.6E-38 330.4 11.3 253 802-1077 72-336 (1317)
314 KOG1035 eIF-2alpha kinase GCN2 100.0 2.2E-33 4.7E-38 331.0 13.2 251 804-1078 478-870 (1351)
315 cd07844 STKc_PCTAIRE_like Cata 100.0 5.3E-32 1.2E-36 302.0 23.8 263 805-1078 5-287 (291)
316 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-31 2.2E-36 298.9 25.6 254 805-1078 1-265 (287)
317 cd05572 STKc_cGK_PKG Catalytic 100.0 7.1E-32 1.5E-36 296.1 24.0 242 813-1078 1-251 (262)
318 KOG0983 Mitogen-activated prot 100.0 8.5E-33 1.8E-37 275.5 14.8 248 808-1078 95-348 (391)
319 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.2E-32 1.1E-36 298.1 22.4 249 812-1081 2-267 (268)
320 KOG0618 Serine/threonine phosp 100.0 2.2E-35 4.8E-40 338.7 -4.8 325 84-480 3-328 (1081)
321 cd07835 STKc_CDK1_like Catalyt 100.0 4.7E-32 1E-36 301.2 22.0 263 807-1078 1-279 (283)
322 cd06627 STKc_Cdc7_like Catalyt 100.0 9.8E-32 2.1E-36 293.4 24.0 247 806-1078 1-250 (254)
323 cd07831 STKc_MOK Catalytic dom 100.0 8.3E-32 1.8E-36 299.0 23.7 262 807-1078 1-278 (282)
324 KOG0200 Fibroblast/platelet-de 100.0 1.6E-32 3.5E-37 331.2 19.3 255 805-1084 296-580 (609)
325 cd05577 STKc_GRK Catalytic dom 100.0 3.9E-32 8.3E-37 300.8 20.6 240 813-1078 1-253 (277)
326 cd07850 STKc_JNK Catalytic dom 100.0 7.3E-32 1.6E-36 309.3 23.6 263 803-1078 14-310 (353)
327 KOG0696 Serine/threonine prote 100.0 4.3E-33 9.3E-38 291.4 12.1 242 805-1072 349-594 (683)
328 cd08225 STKc_Nek5 Catalytic do 100.0 2.5E-32 5.5E-37 298.7 18.9 247 806-1078 1-253 (257)
329 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-31 2.7E-36 301.3 24.8 246 804-1079 14-267 (307)
330 cd05613 STKc_MSK1_N N-terminal 100.0 5.1E-32 1.1E-36 302.0 21.1 250 806-1078 1-267 (290)
331 cd07860 STKc_CDK2_3 Catalytic 100.0 4.5E-32 9.7E-37 301.5 20.6 263 806-1078 1-280 (284)
332 KOG0444 Cytoskeletal regulator 100.0 3E-35 6.5E-40 321.2 -4.9 268 246-646 105-375 (1255)
333 cd08215 STKc_Nek Catalytic dom 100.0 6.4E-32 1.4E-36 295.4 21.3 247 806-1078 1-254 (258)
334 cd06606 STKc_MAPKKK Catalytic 100.0 1.9E-31 4E-36 291.9 24.9 250 806-1078 1-256 (260)
335 cd05583 STKc_MSK_N N-terminal 100.0 2.9E-32 6.4E-37 303.6 18.8 255 806-1083 1-267 (288)
336 cd05606 STKc_beta_ARK Catalyti 100.0 6.2E-32 1.3E-36 299.1 21.1 243 812-1078 1-254 (278)
337 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-31 2.2E-36 300.0 22.7 262 805-1078 5-289 (293)
338 cd07837 STKc_CdkB_plant Cataly 100.0 1.5E-31 3.1E-36 299.2 23.8 263 805-1078 1-290 (295)
339 PHA02882 putative serine/threo 100.0 8.2E-32 1.8E-36 300.5 21.2 254 804-1080 11-293 (294)
340 cd07845 STKc_CDK10 Catalytic d 100.0 1.6E-31 3.5E-36 300.8 23.6 266 804-1078 6-289 (309)
341 cd07840 STKc_CDK9_like Catalyt 100.0 2.1E-31 4.5E-36 296.6 24.3 264 807-1078 1-283 (287)
342 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.3E-31 2.8E-36 294.3 22.3 249 805-1078 2-260 (264)
343 cd08530 STKc_CNK2-like Catalyt 100.0 8.1E-32 1.8E-36 294.5 20.1 245 806-1078 1-252 (256)
344 cd05579 STKc_MAST_like Catalyt 100.0 8.6E-32 1.9E-36 295.8 19.9 245 813-1081 1-256 (265)
345 cd07849 STKc_ERK1_2_like Catal 100.0 6.8E-32 1.5E-36 307.4 19.5 272 804-1084 4-299 (336)
346 cd07855 STKc_ERK5 Catalytic do 100.0 6E-32 1.3E-36 307.6 19.0 267 804-1078 4-293 (334)
347 cd06657 STKc_PAK4 Catalytic do 100.0 1.6E-31 3.5E-36 297.7 22.1 243 810-1078 25-269 (292)
348 PHA03210 serine/threonine kina 100.0 7.2E-32 1.6E-36 321.2 20.4 269 802-1078 145-453 (501)
349 cd05581 STKc_PDK1 Catalytic do 100.0 7.9E-32 1.7E-36 298.8 19.4 248 805-1078 1-276 (280)
350 PLN00009 cyclin-dependent kina 100.0 2.7E-31 5.8E-36 296.8 23.4 264 805-1078 2-283 (294)
351 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.4E-32 2E-36 306.2 20.0 271 804-1083 4-297 (337)
352 cd06616 PKc_MKK4 Catalytic dom 100.0 1.6E-31 3.4E-36 297.8 21.3 253 806-1079 5-267 (288)
353 cd07836 STKc_Pho85 Catalytic d 100.0 2.3E-31 5E-36 295.8 22.5 263 806-1078 1-280 (284)
354 cd07864 STKc_CDK12 Catalytic d 100.0 2.6E-31 5.6E-36 298.2 22.7 269 802-1078 4-298 (302)
355 cd07842 STKc_CDK8_like Catalyt 100.0 1.9E-31 4.2E-36 301.4 21.4 200 806-1013 1-220 (316)
356 cd06635 STKc_TAO1 Catalytic do 100.0 7.6E-31 1.7E-35 296.2 25.9 245 807-1081 27-279 (317)
357 cd07838 STKc_CDK4_6_like Catal 100.0 6.3E-31 1.4E-35 292.8 24.8 264 807-1078 1-283 (287)
358 cd06618 PKc_MKK7 Catalytic dom 100.0 4.6E-31 1E-35 295.1 23.8 252 805-1079 15-273 (296)
359 PTZ00024 cyclin-dependent prot 100.0 4.1E-31 9E-36 301.0 23.3 266 805-1078 8-312 (335)
360 cd07865 STKc_CDK9 Catalytic do 100.0 4.7E-31 1E-35 297.4 23.2 267 804-1078 11-306 (310)
361 KOG0618 Serine/threonine phosp 100.0 1.1E-34 2.5E-39 332.9 -6.5 459 81-669 23-488 (1081)
362 cd05118 STKc_CMGC Catalytic do 100.0 4.8E-31 1E-35 293.0 22.6 262 807-1078 1-279 (283)
363 cd07852 STKc_MAPK15 Catalytic 100.0 2.5E-31 5.4E-36 303.0 20.5 267 803-1079 5-295 (337)
364 cd07834 STKc_MAPK Catalytic do 100.0 2.2E-31 4.8E-36 302.7 19.8 269 806-1084 1-296 (330)
365 cd08216 PK_STRAD Pseudokinase 100.0 8.2E-31 1.8E-35 295.9 24.3 261 810-1078 7-294 (314)
366 cd07830 STKc_MAK_like Catalyti 100.0 4.7E-31 1E-35 293.2 21.8 262 807-1078 1-279 (283)
367 KOG4250 TANK binding protein k 100.0 4.3E-32 9.2E-37 305.4 13.3 270 806-1085 14-312 (732)
368 KOG0603 Ribosomal protein S6 k 100.0 1.3E-31 2.8E-36 299.6 16.7 240 804-1078 321-562 (612)
369 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-30 2.8E-35 295.8 24.6 261 811-1078 4-307 (328)
370 KOG0666 Cyclin C-dependent kin 100.0 7.8E-32 1.7E-36 273.3 12.4 201 805-1013 24-244 (438)
371 KOG1006 Mitogen-activated prot 100.0 6.8E-33 1.5E-37 275.4 3.4 249 810-1078 69-326 (361)
372 cd07879 STKc_p38delta_MAPK13 C 100.0 7.9E-31 1.7E-35 299.2 20.8 266 804-1084 14-304 (342)
373 cd06633 STKc_TAO3 Catalytic do 100.0 3.2E-30 6.9E-35 290.5 24.9 242 807-1078 23-272 (313)
374 cd08222 STKc_Nek11 Catalytic d 100.0 6.9E-31 1.5E-35 287.9 18.9 246 806-1078 1-256 (260)
375 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-30 3.2E-35 292.5 22.0 245 806-1080 16-268 (308)
376 cd07866 STKc_BUR1 Catalytic do 100.0 8.4E-31 1.8E-35 295.4 19.7 267 804-1078 7-307 (311)
377 KOG0671 LAMMER dual specificit 100.0 1.3E-31 2.9E-36 280.7 11.6 274 795-1078 79-405 (415)
378 KOG1024 Receptor-like protein 100.0 3.1E-31 6.7E-36 276.5 14.1 263 796-1083 275-555 (563)
379 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.4E-31 1.6E-35 299.4 18.7 266 804-1078 4-299 (342)
380 cd07829 STKc_CDK_like Catalyti 100.0 1.4E-30 3E-35 289.2 20.2 263 807-1078 1-278 (282)
381 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-30 3.3E-35 295.7 20.9 266 806-1078 1-291 (332)
382 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-30 3.1E-35 294.9 19.9 267 800-1079 5-288 (328)
383 KOG4236 Serine/threonine prote 100.0 1.4E-31 3E-36 287.7 10.6 242 810-1077 569-817 (888)
384 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.4E-30 3.1E-35 297.2 19.7 269 797-1078 9-299 (345)
385 cd05123 STKc_AGC Catalytic dom 100.0 2.8E-30 6.1E-35 281.2 21.0 236 813-1075 1-240 (250)
386 cd05610 STKc_MASTL Catalytic d 100.0 5.3E-30 1.1E-34 314.5 25.4 145 805-956 4-152 (669)
387 KOG1151 Tousled-like protein k 100.0 1.9E-31 4.2E-36 281.1 10.4 256 802-1077 460-739 (775)
388 KOG0695 Serine/threonine prote 100.0 2.9E-31 6.2E-36 270.7 11.3 244 805-1071 250-502 (593)
389 cd05576 STKc_RPK118_like Catal 100.0 1.6E-30 3.4E-35 280.5 17.8 222 816-1076 4-226 (237)
390 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.8E-30 6E-35 294.7 20.4 259 803-1077 13-296 (343)
391 KOG0587 Traf2- and Nck-interac 100.0 3.2E-30 6.9E-35 295.4 19.9 255 800-1078 14-281 (953)
392 cd07851 STKc_p38 Catalytic dom 100.0 9.8E-31 2.1E-35 298.5 15.1 260 803-1078 13-297 (343)
393 KOG0669 Cyclin T-dependent kin 100.0 9.8E-32 2.1E-36 264.7 4.0 266 805-1078 17-314 (376)
394 KOG0614 cGMP-dependent protein 100.0 2.4E-31 5.3E-36 285.5 5.9 241 806-1072 421-665 (732)
395 KOG0608 Warts/lats-like serine 100.0 4.9E-30 1.1E-34 281.4 13.3 203 805-1014 629-876 (1034)
396 KOG1027 Serine/threonine prote 100.0 4E-30 8.7E-35 293.3 12.7 243 807-1078 511-766 (903)
397 PLN03225 Serine/threonine-prot 100.0 2.2E-29 4.7E-34 301.0 16.3 262 803-1078 130-449 (566)
398 KOG0984 Mitogen-activated prot 100.0 8.7E-29 1.9E-33 237.5 15.4 200 807-1014 48-257 (282)
399 KOG0662 Cyclin-dependent kinas 100.0 1.1E-28 2.5E-33 230.9 15.8 264 806-1078 3-282 (292)
400 smart00220 S_TKc Serine/Threon 100.0 4.3E-28 9.3E-33 262.3 22.9 238 817-1078 1-240 (244)
401 PLN03224 probable serine/threo 100.0 3.1E-28 6.7E-33 282.9 20.7 256 804-1078 144-499 (507)
402 KOG0668 Casein kinase II, alph 100.0 2E-28 4.2E-33 238.3 11.3 258 804-1078 37-321 (338)
403 KOG0664 Nemo-like MAPK-related 100.0 1.2E-29 2.7E-34 252.3 2.2 262 809-1078 57-342 (449)
404 KOG1152 Signal transduction se 100.0 1E-28 2.2E-33 269.7 9.3 200 804-1010 560-770 (772)
405 KOG1290 Serine/threonine prote 99.9 4.6E-27 9.9E-32 252.8 18.1 135 804-942 77-222 (590)
406 KOG0665 Jun-N-terminal kinase 99.9 1.2E-27 2.5E-32 245.4 11.8 260 805-1078 17-309 (369)
407 KOG0576 Mitogen-activated prot 99.9 6.9E-28 1.5E-32 267.7 5.4 253 804-1078 14-270 (829)
408 cd00180 PKc Catalytic domain o 99.9 1.7E-25 3.6E-30 236.1 22.3 209 813-1079 1-214 (215)
409 KOG0670 U4/U6-associated splic 99.9 9.9E-27 2.2E-31 250.9 8.3 276 795-1078 422-745 (752)
410 KOG1345 Serine/threonine kinas 99.9 2.2E-26 4.8E-31 229.7 9.6 250 805-1080 24-285 (378)
411 smart00221 STYKc Protein kinas 99.9 4.1E-25 8.9E-30 236.1 20.1 198 807-1011 1-202 (225)
412 KOG1167 Serine/threonine prote 99.9 1.2E-25 2.6E-30 239.9 9.9 269 799-1078 30-380 (418)
413 KOG4237 Extracellular matrix p 99.9 7.8E-27 1.7E-31 244.9 -4.4 295 164-475 60-360 (498)
414 PLN03210 Resistant to P. syrin 99.9 1.1E-22 2.4E-27 264.1 27.0 307 245-668 590-904 (1153)
415 KOG4237 Extracellular matrix p 99.9 8.9E-26 1.9E-30 237.0 -2.2 383 80-471 68-498 (498)
416 PLN00181 protein SPA1-RELATED; 99.9 3.5E-24 7.6E-29 270.2 10.7 192 863-1078 30-264 (793)
417 PRK15387 E3 ubiquitin-protein 99.9 3.7E-23 8.1E-28 248.1 17.0 174 245-474 202-375 (788)
418 smart00750 KIND kinase non-cat 99.9 6.1E-23 1.3E-27 210.4 16.0 164 890-1084 1-170 (176)
419 PLN03210 Resistant to P. syrin 99.9 3.3E-22 7.1E-27 259.6 26.0 223 245-477 612-841 (1153)
420 PRK15387 E3 ubiquitin-protein 99.9 9.6E-23 2.1E-27 244.6 17.1 267 104-484 202-468 (788)
421 KOG0195 Integrin-linked kinase 99.9 1.2E-23 2.5E-28 209.9 7.0 248 808-1084 193-447 (448)
422 KOG1165 Casein kinase (serine/ 99.9 2E-21 4.2E-26 200.1 17.1 261 805-1085 28-301 (449)
423 KOG1164 Casein kinase (serine/ 99.9 2.9E-21 6.2E-26 217.2 19.8 260 806-1085 19-299 (322)
424 PRK09188 serine/threonine prot 99.9 1.6E-21 3.6E-26 217.4 15.3 164 803-984 16-195 (365)
425 PRK15370 E3 ubiquitin-protein 99.9 2E-21 4.3E-26 235.3 17.1 42 25-71 54-99 (754)
426 KOG1163 Casein kinase (serine/ 99.9 1.8E-21 3.9E-26 191.6 12.4 259 804-1083 14-284 (341)
427 KOG1240 Protein kinase contain 99.9 2.9E-22 6.3E-27 234.6 5.3 254 806-1084 24-296 (1431)
428 KOG0590 Checkpoint kinase and 99.9 7.7E-22 1.7E-26 234.8 9.0 252 809-1078 322-584 (601)
429 COG0515 SPS1 Serine/threonine 99.8 3.6E-19 7.8E-24 202.5 25.1 256 807-1079 2-275 (384)
430 PRK15370 E3 ubiquitin-protein 99.8 8.9E-21 1.9E-25 229.6 12.0 96 367-474 243-338 (754)
431 cd05147 RIO1_euk RIO kinase fa 99.8 1.1E-19 2.4E-24 186.8 11.5 139 810-958 2-167 (190)
432 PRK10359 lipopolysaccharide co 99.8 1.4E-19 3E-24 187.1 9.3 172 802-1003 28-216 (232)
433 PRK12274 serine/threonine prot 99.8 1.4E-18 2.9E-23 175.4 15.3 186 809-1012 6-210 (218)
434 cd05145 RIO1_like RIO kinase f 99.8 1.8E-18 3.8E-23 178.8 15.1 140 810-959 2-168 (190)
435 KOG0603 Ribosomal protein S6 k 99.8 8.9E-20 1.9E-24 205.1 3.1 226 812-1073 1-232 (612)
436 KOG1166 Mitotic checkpoint ser 99.8 1.7E-18 3.8E-23 208.8 13.4 249 802-1084 695-954 (974)
437 KOG4158 BRPK/PTEN-induced prot 99.8 1.9E-18 4.2E-23 181.9 10.9 196 862-1079 273-510 (598)
438 KOG0617 Ras suppressor protein 99.8 1.5E-20 3.1E-25 175.7 -4.9 179 385-669 29-211 (264)
439 PF14531 Kinase-like: Kinase-l 99.7 5E-18 1.1E-22 181.0 11.3 231 807-1070 14-288 (288)
440 KOG0617 Ras suppressor protein 99.7 5E-20 1.1E-24 172.1 -5.2 185 265-480 30-218 (264)
441 PRK10345 hypothetical protein; 99.7 5.2E-17 1.1E-21 168.2 15.0 140 808-955 5-156 (210)
442 KOG1023 Natriuretic peptide re 99.7 4E-17 8.6E-22 184.9 13.4 212 862-1086 4-227 (484)
443 cd00116 LRR_RI Leucine-rich re 99.7 5.3E-19 1.2E-23 200.0 -3.3 277 178-472 2-318 (319)
444 cd00116 LRR_RI Leucine-rich re 99.7 1.3E-18 2.8E-23 196.9 -1.6 252 225-476 4-293 (319)
445 smart00090 RIO RIO-like kinase 99.7 1.6E-16 3.5E-21 169.0 12.3 144 805-958 28-198 (237)
446 KOG0606 Microtubule-associated 99.7 1.5E-16 3.3E-21 187.4 10.3 212 804-1077 82-310 (1205)
447 PRK14879 serine/threonine prot 99.6 1.3E-15 2.8E-20 161.0 13.6 134 811-957 2-143 (211)
448 cd05144 RIO2_C RIO kinase fami 99.6 1E-15 2.3E-20 159.6 12.7 145 799-960 9-177 (198)
449 KOG1033 eIF-2alpha kinase PEK/ 99.6 7.1E-17 1.5E-21 178.5 2.9 189 807-1004 246-457 (516)
450 TIGR03724 arch_bud32 Kae1-asso 99.6 2.5E-15 5.3E-20 157.3 12.1 131 812-958 1-139 (199)
451 PRK09605 bifunctional UGMP fam 99.6 4.1E-15 8.9E-20 178.9 13.8 137 804-957 332-476 (535)
452 KOG0532 Leucine-rich repeat (L 99.6 2.3E-16 4.9E-21 173.9 -2.5 189 392-666 78-269 (722)
453 cd05119 RIO RIO kinase family, 99.5 3.7E-14 8.1E-19 146.7 11.8 138 810-959 2-165 (187)
454 KOG0532 Leucine-rich repeat (L 99.5 3.4E-16 7.4E-21 172.5 -4.2 191 394-671 55-248 (722)
455 KOG0590 Checkpoint kinase and 99.5 2.8E-15 6.1E-20 178.9 -0.0 253 805-1077 20-284 (601)
456 PLN03150 hypothetical protein; 99.5 8.2E-14 1.8E-18 169.2 12.3 151 29-186 367-527 (623)
457 cd05120 APH_ChoK_like Aminogly 99.5 1.7E-13 3.7E-18 136.3 12.1 137 809-957 2-138 (155)
458 PRK01723 3-deoxy-D-manno-octul 99.5 2E-13 4.4E-18 145.6 12.2 136 810-958 36-192 (239)
459 PLN03150 hypothetical protein; 99.4 1.6E-13 3.4E-18 166.8 8.3 106 564-669 420-527 (623)
460 TIGR01982 UbiB 2-polyprenylphe 99.4 2.7E-12 5.8E-17 149.0 11.7 144 810-959 122-308 (437)
461 COG4886 Leucine-rich repeat (L 99.3 1.9E-12 4.2E-17 150.7 8.1 105 366-474 141-245 (394)
462 KOG0601 Cyclin-dependent kinas 99.3 2.8E-12 6E-17 145.6 8.3 247 806-1078 115-378 (524)
463 KOG1266 Protein kinase [Signal 99.3 2.6E-12 5.7E-17 133.2 6.3 193 862-1078 124-330 (458)
464 COG4886 Leucine-rich repeat (L 99.3 3.8E-12 8.2E-17 148.3 7.6 199 248-480 97-296 (394)
465 PRK04750 ubiB putative ubiquin 99.2 1.6E-11 3.5E-16 143.7 9.6 145 805-960 120-316 (537)
466 KOG1243 Protein kinase [Genera 99.2 1.2E-10 2.7E-15 133.1 15.7 165 827-1005 35-199 (690)
467 cd05146 RIO3_euk RIO kinase fa 99.2 1.5E-10 3.2E-15 117.7 13.5 138 810-959 2-175 (197)
468 cd05151 ChoK Choline Kinase (C 99.1 1.1E-10 2.3E-15 118.7 9.4 131 810-957 3-136 (170)
469 KOG1909 Ran GTPase-activating 99.1 3.8E-12 8.2E-17 133.8 -2.6 237 79-328 30-310 (382)
470 KOG0601 Cyclin-dependent kinas 99.1 4.9E-11 1.1E-15 135.6 5.4 250 802-1083 262-518 (524)
471 KOG3207 Beta-tubulin folding c 99.1 1E-11 2.2E-16 133.8 -0.1 187 239-451 141-340 (505)
472 KOG1909 Ran GTPase-activating 99.1 4.3E-12 9.3E-17 133.4 -3.3 40 97-136 24-67 (382)
473 KOG3207 Beta-tubulin folding c 99.1 2.1E-11 4.5E-16 131.5 0.4 190 194-403 142-340 (505)
474 PF14580 LRR_9: Leucine-rich r 99.0 2.3E-10 4.9E-15 114.0 5.6 112 98-212 14-127 (175)
475 PF14580 LRR_9: Leucine-rich r 99.0 3.3E-10 7.3E-15 112.7 6.3 110 265-378 16-126 (175)
476 KOG1259 Nischarin, modulator o 99.0 5.5E-11 1.2E-15 121.6 0.5 138 310-479 278-416 (490)
477 cd05154 ACAD10_11_like Acyl-Co 99.0 3.6E-09 7.9E-14 112.7 12.0 144 811-957 4-206 (223)
478 COG3642 Mn2+-dependent serine/ 99.0 6.6E-09 1.4E-13 101.2 12.1 131 811-957 2-140 (204)
479 KOG0531 Protein phosphatase 1, 98.9 1.6E-10 3.4E-15 134.8 -0.4 212 83-329 76-290 (414)
480 KOG0606 Microtubule-associated 98.9 3.3E-10 7.1E-15 134.8 2.2 247 805-1074 804-1084(1205)
481 KOG0531 Protein phosphatase 1, 98.9 2.7E-10 5.9E-15 132.8 0.4 246 100-406 69-322 (414)
482 KOG1259 Nischarin, modulator o 98.9 1.9E-10 4.2E-15 117.7 -0.8 130 102-282 283-413 (490)
483 KOG3087 Serine/threonine prote 98.9 2.3E-08 5.1E-13 96.6 12.3 141 809-957 11-165 (229)
484 COG4248 Uncharacterized protei 98.9 6.8E-08 1.5E-12 104.3 17.0 256 809-1083 15-300 (637)
485 KOG3741 Poly(A) ribonuclease s 98.8 2E-07 4.3E-12 103.6 18.8 166 818-1008 289-475 (655)
486 COG0478 RIO-like serine/threon 98.7 4.5E-08 9.7E-13 101.3 10.5 138 806-958 92-252 (304)
487 PF01163 RIO1: RIO1 family; I 98.7 6.4E-08 1.4E-12 98.2 11.1 128 820-959 1-157 (188)
488 KOG4658 Apoptotic ATPase [Sign 98.7 1.8E-08 3.9E-13 125.2 6.8 273 198-476 523-809 (889)
489 PRK15123 lipopolysaccharide co 98.7 3.1E-07 6.6E-12 99.2 14.8 143 811-957 28-194 (268)
490 PF08263 LRRNT_2: Leucine rich 98.6 2.2E-08 4.9E-13 74.8 3.5 40 33-75 2-43 (43)
491 PF13855 LRR_8: Leucine rich r 98.6 3.2E-08 7E-13 80.9 3.4 60 414-473 2-61 (61)
492 PF13855 LRR_8: Leucine rich r 98.6 3.7E-08 8.1E-13 80.6 3.2 59 390-448 2-60 (61)
493 KOG4658 Apoptotic ATPase [Sign 98.5 4.4E-08 9.5E-13 121.8 4.3 102 103-208 523-628 (889)
494 KOG2137 Protein kinase [Signal 98.5 3.2E-08 6.8E-13 114.2 1.7 150 912-1078 106-264 (700)
495 KOG2120 SCF ubiquitin ligase, 98.5 5.4E-09 1.2E-13 107.5 -4.0 176 150-327 186-374 (419)
496 KOG2982 Uncharacterized conser 98.5 1E-08 2.2E-13 105.4 -2.2 86 124-209 42-132 (418)
497 PF06293 Kdo: Lipopolysacchari 98.4 1.3E-06 2.9E-11 91.3 11.4 109 847-958 57-171 (206)
498 COG1718 RIO1 Serine/threonine 98.4 1.7E-06 3.7E-11 89.0 10.9 157 793-959 33-217 (268)
499 PRK09902 hypothetical protein; 98.4 5.6E-06 1.2E-10 84.4 14.3 140 813-957 26-179 (216)
500 KOG1859 Leucine-rich repeat pr 98.3 1.5E-08 3.2E-13 115.7 -6.6 180 191-402 102-292 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.5e-111 Score=1092.50 Aligned_cols=919 Identities=31% Similarity=0.490 Sum_probs=710.4
Q ss_pred CchhhHHHHHHHHhhcccCCCCCcccccccCCCCCCcccCCceeCCCCceeEEeccccccccccccccccCCccCCeeeC
Q 001384 31 SLETDREVLSNLRSFLENNNPVNEGHYMQWNQSSSPCEWPGIICSPDKARVNGLNLTDWNISGDIFNNFSALTQLSYLDL 110 (1088)
Q Consensus 31 ~~~~d~~~l~~~~~~~~~~~~~~~~~~~sW~~~~~~C~W~gv~C~~~~~~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~L 110 (1088)
..+.|++||++||+.+.+ +.+.+.+|+...+||.|.||+|+. .++|+.|+|++++++|.+++.+..+++|++|+|
T Consensus 26 ~~~~~~~~l~~~~~~~~~----~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~L 100 (968)
T PLN00113 26 LHAEELELLLSFKSSIND----PLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINL 100 (968)
T ss_pred CCHHHHHHHHHHHHhCCC----CcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEEC
Confidence 356899999999999853 345688999888999999999985 569999999999999999999999999999999
Q ss_pred CCCCCCCCcCccCC-CCCCCcEEECccccccCcccCCCCCCCceeecccccccccccCchhhhcccceEEeccCccCCCC
Q 001384 111 SRNTFSGSIPDDLS-SCRSLKYLNLSHNILSGDLNLSGLRSLEILDLSVNRIHGEISFSFPAICEKLVVANLSLNNLTGR 189 (1088)
Q Consensus 111 s~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 189 (1088)
++|+++|.+|..+. .+++|++|+|++|.+++..+...+++|++|+|++|.+++.+|..+. .+++|++|+|++|.+.+.
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~ 179 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGK 179 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHh-cCCCCCEEECccCccccc
Confidence 99999999998765 9999999999999999888888899999999999999988887764 468999999999999999
Q ss_pred CCccccCCCCCcEEEccCccccccccc---cCcccceecccCcccccccccccccCCCccCEEEcCCCcccccCcccccC
Q 001384 190 IDTCFDGCLNLRYLDLSSNNFRGNIWN---GLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEFIGDFPGEVSN 266 (1088)
Q Consensus 190 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~ 266 (1088)
+|..+.++++|++|+|++|++.+.++. .+.+|+.|++++|.+++.++. .+..+++|++|+|++|++++.+|..+++
T Consensus 180 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 258 (968)
T PLN00113 180 IPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPY-EIGGLTSLNHLDLVYNNLTGPIPSSLGN 258 (968)
T ss_pred CChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCCh-hHhcCCCCCEEECcCceeccccChhHhC
Confidence 999999999999999999999876653 456777777777777765443 4567777777777777777777777777
Q ss_pred CCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhhhcccccceee
Q 001384 267 CRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVKILA 346 (1088)
Q Consensus 267 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 346 (1088)
+++|++|+|++|++.+.+|..+..+++|+.|+|++|.+.+.+|..+.++++|+.|++++|.+.+..|..++.+++|+.|+
T Consensus 259 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 338 (968)
T PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338 (968)
T ss_pred CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEE
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCCcccCCCCCCcEEEccCCcCC
Q 001384 347 LHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELT 426 (1088)
Q Consensus 347 L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 426 (1088)
+++|.+.. ..+..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++.+.+|..++.+++|+.|++++|+++
T Consensus 339 L~~n~l~~-~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~ 417 (968)
T PLN00113 339 LWSNKFSG-EIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS 417 (968)
T ss_pred CcCCCCcC-cCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEee
Confidence 77776533 33445666777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCchhhccCCCCCccccccccCCcccccCC
Q 001384 427 GPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPEVMTIGRNARPTFEANQRNGERTIAGS 506 (1088)
Q Consensus 427 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 506 (1088)
+.+|..+.++++|+.|++++|++++.+|..+..+++|++|+|++|++.|.+|..+.
T Consensus 418 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~------------------------ 473 (968)
T PLN00113 418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG------------------------ 473 (968)
T ss_pred eECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc------------------------
Confidence 77777777777777777777777777777777777777777777777766654220
Q ss_pred ccccccccccCCCCCCCcceeeehhccccchhhhhcccCCcccccccCCCcccceeeeceEEccCCccccccCcccccCC
Q 001384 507 SECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPVCLPGLASRTFQITGYLQLSGNQLSGELSPDIGKLQ 586 (1088)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~l~~L~l~~N~l~g~~p~~~~~l~ 586 (1088)
...++.|++++|+++|.+|..+++++
T Consensus 474 ------------------------------------------------------~~~L~~L~ls~n~l~~~~~~~~~~l~ 499 (968)
T PLN00113 474 ------------------------------------------------------SKRLENLDLSRNQFSGAVPRKLGSLS 499 (968)
T ss_pred ------------------------------------------------------cccceEEECcCCccCCccChhhhhhh
Confidence 01346799999999999999999999
Q ss_pred CccEEeccccccccCCCCcccCc-cceEEEccCCcccccCCccccCCccCcEEEccccccCCcCCcccccccccceeecc
Q 001384 587 NFSMVHLGFNQFDGKLPSQFDQL-PLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNIS 665 (1088)
Q Consensus 587 ~L~~L~l~~N~l~g~~p~~~~~l-~l~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~ 665 (1088)
+|+.|+|++|+++|.+|+.++.+ .|++|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+.++++|+.|+++
T Consensus 500 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 579 (968)
T PLN00113 500 ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNIS 579 (968)
T ss_pred ccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEecc
Confidence 99999999999999999999988 69999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCcccccccCccCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 001384 666 YNPLVSGTIPSTGQLATFEKTSYLGDPLLDLPDFIENGPHHGHKYPNSNGRTGNNTKLTIILAFLALLMACLICGVLSII 745 (1088)
Q Consensus 666 ~N~l~~g~ip~~~~~~~~~~~~~~~n~~~~~P~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (1088)
+|++ .|.+|+.+++.++...+|.||+.+|.++. ....++|... ........++++++ ++++++++++++
T Consensus 580 ~N~l-~~~~p~~~~~~~~~~~~~~~n~~lc~~~~--~~~~~~c~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~ 648 (968)
T PLN00113 580 HNHL-HGSLPSTGAFLAINASAVAGNIDLCGGDT--TSGLPPCKRV-----RKTPSWWFYITCTL---GAFLVLALVAFG 648 (968)
T ss_pred CCcc-eeeCCCcchhcccChhhhcCCccccCCcc--ccCCCCCccc-----cccceeeeehhHHH---HHHHHHHHHHHH
Confidence 9999 89999999999999999999999994332 1123344321 01111111111111 111112222222
Q ss_pred HHHHhcCcccccccccccccccccccCCCCCCCCCCCCceeEEeccCCccCHHHHHHHcCCCCccceecccCceEEEEEE
Q 001384 746 IYMLVKRPAEQQGYLLEGMKYRHDLASSSGGSSPWLSDTVKVIRLDKTAFTYSDILKATGKFSEDRIIGKGGFGTVYRGV 825 (1088)
Q Consensus 746 ~~~~~kr~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~ 825 (1088)
++.+++|+..+.+.. + ...+ .|.... ........+++.++. ..|...++||+|+||.||+|+
T Consensus 649 ~~~~~~~~~~~~~~~-~---------~~~~---~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~ 710 (968)
T PLN00113 649 FVFIRGRNNLELKRV-E---------NEDG---TWELQF--FDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGK 710 (968)
T ss_pred HHHHHhhhccccccc-c---------cccc---cccccc--cccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEE
Confidence 222222221111100 0 0000 011000 000111234444443 457778899999999999999
Q ss_pred eC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCH
Q 001384 826 LP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTW 904 (1088)
Q Consensus 826 ~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~ 904 (1088)
+. +++.||||++....... ..|++.+++ ++|||||++++++.+++..++||||+++|+|.++++. ++|
T Consensus 711 ~~~~~~~vavK~~~~~~~~~----~~~~~~l~~----l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~ 779 (968)
T PLN00113 711 SIKNGMQFVVKEINDVNSIP----SSEIADMGK----LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSW 779 (968)
T ss_pred ECCCCcEEEEEEccCCcccc----HHHHHHHhh----CCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCH
Confidence 74 78999999987543221 345677765 6899999999999999999999999999999999964 899
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcccccccccccccCccccCCC
Q 001384 905 RRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTW 984 (1088)
Q Consensus 905 ~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 984 (1088)
.++.+++.|+|+||+|||..+.++|+||||||+||+++.++.+++. ||.+..... .....++..|+|||++.+.
T Consensus 780 ~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~ 853 (968)
T PLN00113 780 ERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----DTKCFISSAYVAPETRETK 853 (968)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----CCCccccccccCcccccCC
Confidence 9999999999999999997666699999999999999999988875 665543321 1223678999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHhCCcCCCCC---chhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhh
Q 001384 985 QATTKGDVYSFGVLAMELATGRRALEGG---EECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVR 1061 (1088)
Q Consensus 985 ~~~~~~DvwslG~~l~elltg~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 1061 (1088)
.++.++|||||||++|||+||+.||... .....+|.+...... .....+++..... .....+...++.+++.+
T Consensus 854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ 929 (968)
T PLN00113 854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC---HLDMWIDPSIRGD-VSVNQNEIVEVMNLALH 929 (968)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc---chhheeCccccCC-CCccHHHHHHHHHHHHh
Confidence 9999999999999999999999999643 235667766543211 1222233332221 12345667789999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1062 CTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1062 cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
|++.||++||+|+||+++|+++.+
T Consensus 930 Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 930 CTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred hCcCCchhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999875
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-57 Score=591.73 Aligned_cols=508 Identities=34% Similarity=0.513 Sum_probs=436.2
Q ss_pred ccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCccc---CCCCCCCceeecccccccccccCchhhhcccceEE
Q 001384 103 TQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDLN---LSGLRSLEILDLSVNRIHGEISFSFPAICEKLVVA 179 (1088)
Q Consensus 103 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L 179 (1088)
.+++.|||++|.++|.+|..+..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++.+|.. .+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---SIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc---ccCCCCEE
Confidence 478999999999999999999999999999999999986443 458999999999999999888863 35789999
Q ss_pred eccCccCCCCCCccccCCCCCcEEEccCccccccccc---cCcccceecccCcccccccccccccCCCccCEEEcCCCcc
Q 001384 180 NLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRGNIWN---GLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEF 256 (1088)
Q Consensus 180 ~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 256 (1088)
+|++|.+++.+|..++++++|++|+|++|.+.+.++. .+++|+.|++++|.+++.++ ..+..+++|++|+|++|++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIP-RELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCC-hHHcCcCCccEEECcCCcc
Confidence 9999999999999999999999999999999876554 56788888888888877654 4567788888888888888
Q ss_pred cccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhh
Q 001384 257 IGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIF 336 (1088)
Q Consensus 257 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 336 (1088)
++.+|..++++++|++|++++|++.+.+|..++++++|+.|+|++|++.+.+|..+.++++|++|+|++|.+.+.+|..+
T Consensus 225 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~ 304 (968)
T PLN00113 225 SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304 (968)
T ss_pred CCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCCcccCCCCCCc
Q 001384 337 GRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQ 416 (1088)
Q Consensus 337 ~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 416 (1088)
..+++|+.|++++|.+.. ..+..+..+++|+.|+|++|.+++.+|..++.+++|+.|++++|++++.+|..+..+++|+
T Consensus 305 ~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~ 383 (968)
T PLN00113 305 IQLQNLEILHLFSNNFTG-KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLF 383 (968)
T ss_pred cCCCCCcEEECCCCccCC-cCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCC
Confidence 888888888888887544 3345667788888888888888888888888888888888888888888888888888888
Q ss_pred EEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCchhhccCCCCCccccccc
Q 001384 417 TLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPEVMTIGRNARPTFEANQ 496 (1088)
Q Consensus 417 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~n~ 496 (1088)
.|++++|++.+.+|..++++++|+.|++++|++++.+|..+.++++|+.|++++|+++|.+|..+..+
T Consensus 384 ~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------------ 451 (968)
T PLN00113 384 KLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM------------ 451 (968)
T ss_pred EEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccC------------
Confidence 88888888888888888888888888888888888888888888888888888888887666543211
Q ss_pred cCCcccccCCccccccccccCCCCCCCcceeeehhccccchhhhhcccCCcccccccCCCcccceeeeceEEccCCcccc
Q 001384 497 RNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPVCLPGLASRTFQITGYLQLSGNQLSG 576 (1088)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~l~~L~l~~N~l~g 576 (1088)
..+++|+|++|++.|
T Consensus 452 -----------------------------------------------------------------~~L~~L~L~~n~~~~ 466 (968)
T PLN00113 452 -----------------------------------------------------------------PSLQMLSLARNKFFG 466 (968)
T ss_pred -----------------------------------------------------------------CCCcEEECcCceeee
Confidence 234679999999999
Q ss_pred ccCcccccCCCccEEeccccccccCCCCcccCc-cceEEEccCCcccccCCccccCCccCcEEEccccccCCcCCccccc
Q 001384 577 ELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQL-PLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNN 655 (1088)
Q Consensus 577 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-~l~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 655 (1088)
.+|..++ ..+|+.|++++|+++|.+|..+..+ .|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..++.
T Consensus 467 ~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 545 (968)
T PLN00113 467 GLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSE 545 (968)
T ss_pred ecCcccc-cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhC
Confidence 9998764 5899999999999999999999988 6999999999999999999999999999999999999999999999
Q ss_pred ccccceeeccCCCCccccCCCC-CcccccccCccCCCCCC
Q 001384 656 LTELSKLNISYNPLVSGTIPST-GQLATFEKTSYLGDPLL 694 (1088)
Q Consensus 656 l~~L~~l~l~~N~l~~g~ip~~-~~~~~~~~~~~~~n~~~ 694 (1088)
+++|+.|+|++|++ +|.+|.. ..+..+....+.+|+..
T Consensus 546 l~~L~~L~Ls~N~l-~~~~p~~l~~l~~L~~l~ls~N~l~ 584 (968)
T PLN00113 546 MPVLSQLDLSQNQL-SGEIPKNLGNVESLVQVNISHNHLH 584 (968)
T ss_pred cccCCEEECCCCcc-cccCChhHhcCcccCEEeccCCcce
Confidence 99999999999999 8899865 45566666777788765
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=421.76 Aligned_cols=286 Identities=48% Similarity=0.836 Sum_probs=244.7
Q ss_pred cCCccCHHHHHHHcCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEE
Q 001384 791 DKTAFTYSDILKATGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTL 870 (1088)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l 870 (1088)
....|++.++.++|++|...++||+|+||.||+|...+|+.||||++........++|..|++++.+ ++|||+|++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~----l~H~Nlv~L 136 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSR----LRHPNLVKL 136 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhc----CCCcCcccE
Confidence 4566999999999999999999999999999999999899999998876533215669999999997 679999999
Q ss_pred eeEEecCC-eEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCE
Q 001384 871 YGWCLDGS-EKILVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKA 947 (1088)
Q Consensus 871 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~ 947 (1088)
+|||.+.+ +.++|||||++|+|.++++... .++|.++.+||.++|+||+|||+.+.++||||||||+|||+|+++.+
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 99999998 5999999999999999998765 89999999999999999999999998899999999999999999999
Q ss_pred EEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCC----chhHHHHHHhh
Q 001384 948 LVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGG----EECLVEWGRRV 1023 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~----~~~~~~~~~~~ 1023 (1088)
||+|||+|+..............||.+|+|||+...+..+.|+|||||||++.|++||+.+.+.. .....+|+...
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 99999999654331111111117999999999999999999999999999999999999988753 23588998766
Q ss_pred hccCCCCCCccccchhhcCCCcccc-HHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1024 MGYGRHGPGRAVIPVVLLGSGLAEG-AEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.... ...+++|+.+.... .+ .+...++.+++.+|++.+|.+||+|.||+++|+.+.+
T Consensus 297 ~~~~---~~~eiiD~~l~~~~--~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 297 LEEG---KLREIVDPRLKEGE--YPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHCc---chhheeCCCccCCC--CChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 5333 66777777765311 12 2678889999999999999999999999999987654
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=385.25 Aligned_cols=257 Identities=28% Similarity=0.432 Sum_probs=217.6
Q ss_pred CccCHHHHHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEcccc-CccchHHHHHHHHHHhCCCCCCCCCceeEE
Q 001384 793 TAFTYSDILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQRE-GLEGEREFRAEMEVLSGNGFGWPHPNLVTL 870 (1088)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~~l~h~niv~l 870 (1088)
..++.+|+. ..+.||+|..|+|||++++ +++.+|+|++... ..+.++++.+|++++.. .+||+||.+
T Consensus 74 ~~i~~~dle-------~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~----~~spyIV~~ 142 (364)
T KOG0581|consen 74 NGISLSDLE-------RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRS----CQSPYIVGF 142 (364)
T ss_pred cccCHHHhh-------hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhh----CCCCCeeeE
Confidence 345666654 4578999999999999987 6888999999543 34456789999999997 579999999
Q ss_pred eeEEecCC-eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEE
Q 001384 871 YGWCLDGS-EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALV 949 (1088)
Q Consensus 871 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl 949 (1088)
||+|..+. ...++||||++|+|+++++..+++++....+|+.+|++||.|||+.. +||||||||+||||++.|.|||
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKi 220 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKI 220 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEe
Confidence 99999998 59999999999999999999899999999999999999999999742 9999999999999999999999
Q ss_pred eecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC
Q 001384 950 TDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH 1029 (1088)
Q Consensus 950 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1088)
+|||.+..+... ...+++||..|||||.+.+..|+.++||||||+.++||.+|+.||....+....|
T Consensus 221 cDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~---------- 287 (364)
T KOG0581|consen 221 CDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDI---------- 287 (364)
T ss_pred ccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCH----------
Confidence 999999877533 6678899999999999999999999999999999999999999998752222222
Q ss_pred CCCccccchhhcCCCccccHH-HHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 GPGRAVIPVVLLGSGLAEGAE-EMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+.+..++.+.....|.. +..++..++..|+++||.+||+++++++
T Consensus 288 ---~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 288 ---FELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ---HHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 233333444333334444 6788999999999999999999999875
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=393.35 Aligned_cols=253 Identities=36% Similarity=0.567 Sum_probs=211.7
Q ss_pred ccceecccCceEEEEEEeCCCcEEEEEEccccCccc--hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC-eEEEEEE
Q 001384 809 EDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG--EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS-EKILVYE 885 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~-~~~lv~e 885 (1088)
..+.||+|+||+||+|.++....||||++....... .++|.+|+.++.+ ++|||||+++|+|.+.. ..++|||
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~----l~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSR----LRHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHh----CCCCCeeeEEEEEcCCCCceEEEEE
Confidence 345699999999999999744449999998754333 4589999999997 78999999999999887 7999999
Q ss_pred ecCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCCEEEcCCC-CEEEeecccceeecCC
Q 001384 886 YMEGGSLEDIISD--RTRLTWRRRLDIAIDVARALVFLHHECYPP-IVHRDVKASNVLLDKEG-KALVTDFGLARVVSAG 961 (1088)
Q Consensus 886 ~~~~gsL~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~-ivH~DLkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 961 (1088)
|+++|+|.++++. ...+++..+..+|.|||+||+|||++ + ||||||||+|||++.++ ++||+|||+++.....
T Consensus 121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999988 57899999999999999999999999 7 99999999999999997 9999999999876532
Q ss_pred CCcccccccccccccCccccC--CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQ--TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
. ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||.+............
T Consensus 198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~---------------- 260 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVV---------------- 260 (362)
T ss_pred c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh----------------
Confidence 2 2333478999999999999 56999999999999999999999999998765222221111
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
.+.+...+..+...+..++.+||+.||.+||++.||+..|+.+..+
T Consensus 261 -~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 261 -GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred -cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 1111222334667889999999999999999999999999988653
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=375.11 Aligned_cols=202 Identities=33% Similarity=0.528 Sum_probs=183.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.++|.+.+.||+|+||+||+|+++ ++.+||||.+.+... +..+-...|+.+++. ++|||||++++++..++..
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLke----l~H~nIV~l~d~~~~~~~i 84 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKE----LKHPNIVRLLDCIEDDDFI 84 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHh----cCCcceeeEEEEEecCCeE
Confidence 467888899999999999999976 689999999988743 334567899999997 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC------CCEEEeeccc
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE------GKALVTDFGL 954 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~------~~~kl~Dfg~ 954 (1088)
|+|||||.||+|.+|+++++++++..++.++.|+|.||++||++ +||||||||+|||++.. -.+||+|||+
T Consensus 85 ~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999999999999999999999999999999999999 99999999999999865 4689999999
Q ss_pred ceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch
Q 001384 955 ARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE 1014 (1088)
Q Consensus 955 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 1014 (1088)
|+... ......+.+|++.|||||+++..+|+.|+|+||+|+++|+|++|+.||.....
T Consensus 162 AR~L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 162 ARFLQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hhhCC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 99886 34456678999999999999999999999999999999999999999986543
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-43 Score=390.37 Aligned_cols=247 Identities=26% Similarity=0.399 Sum_probs=215.3
Q ss_pred CCCCccceecccCceEEEEEEe-CCCcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVL-PDGREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.+|...+.||+|||+.||.+++ .+|+.||+|++.+.. ....+.+.+|+++.+. ++|||||+++++|++.+.+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~----L~HpnIV~f~~~FEDs~nV 93 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRS----LKHPNIVQFYHFFEDSNNV 93 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHh----cCCCcEEeeeeEeecCCce
Confidence 5799999999999999999998 689999999998743 3345678999999997 7899999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+|.|+|+.++|..++++++++++.+++.+.+||+.||.|||+. +|+|||||..|++++++.++||+|||+|..+..
T Consensus 94 YivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 94 YIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 99999999999999999999999999999999999999999999 999999999999999999999999999998864
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
. .....+.+||+.|.|||++....++..+||||+|||+|-|+.|++||+... +.+.+.++..-.. .
T Consensus 171 ~-~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--vkety~~Ik~~~Y------~----- 236 (592)
T KOG0575|consen 171 D-GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--VKETYNKIKLNEY------S----- 236 (592)
T ss_pred c-ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--HHHHHHHHHhcCc------c-----
Confidence 3 234567899999999999999999999999999999999999999998742 3333333321111 1
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.|.....+..++|.++|+++|.+||++++|+.
T Consensus 237 ------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 237 ------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ------cccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 13344567788999999999999999999975
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=389.24 Aligned_cols=254 Identities=30% Similarity=0.453 Sum_probs=223.2
Q ss_pred CCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+...+.||+|.||+||.|.++....||+|.++... ...++|.+|+++|++ ++|++||+++++|..++..||||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~----L~H~~lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKK----LRHEKLVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHh----CcccCeEEEEEEEecCCceEEEEEe
Confidence 34568899999999999999877799999998763 345688899999997 7899999999999999999999999
Q ss_pred cCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 887 MEGGSLEDIISD--RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 887 ~~~gsL~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
|+.|+|.++++. ...+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+........
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 999999999987 45699999999999999999999999 9999999999999999999999999999966555554
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 965 VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
......-+..|+|||.+....++.|+|||||||+||||+| |+.||.+... .+++...-.|.
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn------------------~ev~~~le~Gy 421 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN------------------EEVLELLERGY 421 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH------------------HHHHHHHhccC
Confidence 5555667889999999999999999999999999999999 7778776432 33444455566
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
+.+.|..++..+++++..||+.+|++|||++.+...++++...
T Consensus 422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 7777889999999999999999999999999999999988754
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-43 Score=372.89 Aligned_cols=250 Identities=26% Similarity=0.369 Sum_probs=207.5
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc-------chHHHHHHHHHHhCCCCCCCCCceeEEeeEE
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE-------GEREFRAEMEVLSGNGFGWPHPNLVTLYGWC 874 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~ 874 (1088)
..+.|.+.+.+|+|+||.|-+|..+ +|+.||||++.+.... ....+.+|+++|++ ++|||||++++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkk----L~HP~IV~~~d~f 245 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKK----LSHPNIVRIKDFF 245 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHh----cCCCCEEEEeeee
Confidence 3456888999999999999999965 7999999999864322 23457899999997 7899999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC---CCEEEee
Q 001384 875 LDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE---GKALVTD 951 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~---~~~kl~D 951 (1088)
..++..||||||++||.|.+.+-.++.+.+.....+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecc
Confidence 99999999999999999999999999999999999999999999999999 99999999999999866 7899999
Q ss_pred cccceeecCCCCcccccccccccccCccccCCCC---CCcchhHHHHHHHHHHHHhCCcCCCCCchhH---HHHHHhhhc
Q 001384 952 FGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQ---ATTKGDVYSFGVLAMELATGRRALEGGEECL---VEWGRRVMG 1025 (1088)
Q Consensus 952 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~~l~elltg~~p~~~~~~~~---~~~~~~~~~ 1025 (1088)
||+|+... +.....+.+||+.|.|||++.+.. +..++|+||+||++|-+++|.+||.+..... .+..+..+
T Consensus 323 FGlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y- 399 (475)
T KOG0615|consen 323 FGLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY- 399 (475)
T ss_pred cchhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc-
Confidence 99999875 334567789999999999877653 3348899999999999999999998653311 11111111
Q ss_pred cCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1026 YGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.. ......+...+..++|.+|+..||++||+++|+++
T Consensus 400 -~f---------------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 400 -AF---------------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred -cc---------------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 00 01123455678889999999999999999999975
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-43 Score=366.10 Aligned_cols=242 Identities=27% Similarity=0.352 Sum_probs=207.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
.++|++.++||+|+||+||.++.+ +++.+|+|++++..... .+..++|..++.+ ++||.||+++..|++.+.
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~----v~hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSK----IKHPFIVKLIYSFQTEEK 99 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHh----CCCCcEeeeEEecccCCe
Confidence 356899999999999999999976 68899999999875443 3568899999987 689999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.|+|+||+.||.|...+++.+.+++..++.++.+|+.||.|||++ +||||||||+|||+|.+|+++|+|||+++..-
T Consensus 100 LylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999999999999999999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
. +...+.+++||+.|||||++....|+..+|+||+|+++|||++|.+||.+.+. ..+...+....
T Consensus 177 ~-~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--~~~~~~I~~~k------------ 241 (357)
T KOG0598|consen 177 K-DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--KKMYDKILKGK------------ 241 (357)
T ss_pred c-CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--HHHHHHHhcCc------------
Confidence 3 23345568999999999999999999999999999999999999999997543 33444443111
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCC
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARP 1071 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1071 (1088)
....+.-...+..+++.+.++.||++|.
T Consensus 242 ----~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 ----LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ----CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 1111222446778888899999999996
No 11
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-42 Score=398.96 Aligned_cols=256 Identities=29% Similarity=0.468 Sum_probs=219.9
Q ss_pred CCCccceecccCceEEEEEEeC------CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
+.+..+.||+|+||+||+|+.. +...||||.+++.+.. .+.+|++|++++.. ++|||||+++|+|.+++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~----l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAE----LQHPNIVRLLGVCREGD 562 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHh----ccCCCeEEEEEEEccCC
Confidence 3455688999999999999943 3457999999988666 67899999999997 78999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcC--------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC
Q 001384 879 EKILVYEYMEGGSLEDIISDRT--------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE 944 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~--------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~ 944 (1088)
..++|+|||..|+|.+++..+. +++..+.+.||.|||.||+||.++ .+|||||..+|+||.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 9999999999999999996432 278899999999999999999999 89999999999999999
Q ss_pred CCEEEeecccceeecCCCCcccc-cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHh
Q 001384 945 GKALVTDFGLARVVSAGDSHVST-TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRR 1022 (1088)
Q Consensus 945 ~~~kl~Dfg~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~ 1022 (1088)
..|||+|||+++.....+.+... ...-+.+|||||.+..++|+.++|||||||+|||+++ |+-||.+...
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-------- 711 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-------- 711 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------
Confidence 99999999999987766665543 4456789999999999999999999999999999998 8889887533
Q ss_pred hhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1023 VMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
.++++-+..+...+.|+.++.++++|+.+||+..|.+||+++||-..|++..+.
T Consensus 712 ----------~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 712 ----------QEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred ----------HHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 222222333344556888999999999999999999999999999999987654
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.4e-43 Score=349.42 Aligned_cols=253 Identities=25% Similarity=0.432 Sum_probs=207.5
Q ss_pred CCCccceecccCceEEEEEEe-CCCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeE-EecCC-eE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVL-PDGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGW-CLDGS-EK 880 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~-~~~~~-~~ 880 (1088)
+|++.++||+|+||+||++.. .+|..||.|.++-... ...++...|+.++++ ++|||||+++++ +.++. ..
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQ----L~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQ----LNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHh----cCCchHHHHHHHhhhccchhh
Confidence 477889999999999999995 4899999999985433 334578899999997 789999999994 33444 48
Q ss_pred EEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCEEEcCCCCEEEeeccc
Q 001384 881 ILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPP--IVHRDVKASNVLLDKEGKALVTDFGL 954 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~--ivH~DLkp~NIll~~~~~~kl~Dfg~ 954 (1088)
++|||||++|+|...++. ++.++++.+|+++.|++.||.++|.+. +. |+||||||.||+++.+|.+|++|||+
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL 174 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGL 174 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchh
Confidence 999999999999998864 456999999999999999999999953 24 99999999999999999999999999
Q ss_pred ceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 955 ARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 955 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
++.+... .......+|||.||+||.+...+|++|+||||+||++|||+.-+.||.+. +..+.-..+..
T Consensus 175 ~r~l~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~q--------- 242 (375)
T KOG0591|consen 175 GRFLSSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIEQ--------- 242 (375)
T ss_pred HhHhcch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHHc---------
Confidence 9988643 33456789999999999999999999999999999999999999999986 33333333321
Q ss_pred ccchhhcCCCcccc-HHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1035 VIPVVLLGSGLAEG-AEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
+...+.| .....++..+|..|+..||+.||+...++..+..
T Consensus 243 -------gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 243 -------GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -------CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1111223 5567789999999999999999986555554443
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=369.49 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=214.1
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccch---HHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE---REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
+...+|..++.||+|+|++||+|+.+ +++++|||++.+.....+ +.+..|-.+|.++. .||.|+++|..|.++
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~---~hPgivkLy~TFQD~ 146 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS---GHPGIVKLYFTFQDE 146 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh---CCCCeEEEEEEeecc
Confidence 33467888999999999999999965 689999999987654333 45677888887743 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 878 SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
...|+|+||+++|+|.++|++.+.+++..++.++.||+.|++|||++ |||||||||+|||+|+|++++|+|||.|+.
T Consensus 147 ~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 147 ESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred cceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccccc
Confidence 99999999999999999999999999999999999999999999999 999999999999999999999999999998
Q ss_pred ecCCCCc----------c--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhc
Q 001384 958 VSAGDSH----------V--STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMG 1025 (1088)
Q Consensus 958 ~~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~ 1025 (1088)
+.+.... . ...++||..|.+||++.....++.+|+|+|||++|+|+.|++||.+.++...-.......
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~ 303 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD 303 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc
Confidence 7642211 1 145899999999999999999999999999999999999999999988754432222221
Q ss_pred cCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1026 YGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
|.. ++..+..+.+||.+.+..||.+|++.++|.+
T Consensus 304 y~f-------------------p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 304 YEF-------------------PEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred ccC-------------------CCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 211 2333467788889999999999999988764
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=334.31 Aligned_cols=236 Identities=28% Similarity=0.363 Sum_probs=205.1
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+|+..+.||.|+||.|.+++.+ +|..+|+|++.+..... .+...+|..+++. +.||+++++++.+.+.+..|
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~----v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKA----VSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhh----ccCceeEEEEEeeccCCeEE
Confidence 5788899999999999999976 68899999998865433 3467789999987 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||++||.|..++++.+++++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|+.+..
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC-
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999998753
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
.+-+.+||+.|+|||++....|..++|+|||||++|||+.|.+||.+..+ .+.+..+..
T Consensus 197 ---rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~iY~KI~~---------------- 255 (355)
T KOG0616|consen 197 ---RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQIYEKILE---------------- 255 (355)
T ss_pred ---cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HHHHHHHHh----------------
Confidence 25567999999999999999999999999999999999999999998665 333333321
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCC
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARP 1071 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1071 (1088)
.....|.....++.+++...++.|-.+|.
T Consensus 256 -~~v~fP~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 256 -GKVKFPSYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred -CcccCCcccCHHHHHHHHHHHhhhhHhhh
Confidence 11122444556788889999999999993
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.8e-41 Score=338.87 Aligned_cols=265 Identities=23% Similarity=0.274 Sum_probs=204.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
++|+...++|+|+||+|||++.+ +|+.||||++..... .-++-..+|++++++ ++|+|+|.++++|......+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKq----LkH~NLVnLiEVFrrkrklh 77 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQ----LKHENLVNLIEVFRRKRKLH 77 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHh----cccchHHHHHHHHHhcceeE
Confidence 46888899999999999999987 699999999986532 234557899999997 78999999999999999999
Q ss_pred EEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+|+|||+. ++.+-+++ ...++.+.+.++.+|++.|+.|+|++ ++|||||||+||+|+.+|.+|+||||+|+.+..
T Consensus 78 LVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 78 LVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred EEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99999988 55444444 45689999999999999999999999 999999999999999999999999999998874
Q ss_pred CCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHH-hhh---------ccCCC
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGR-RVM---------GYGRH 1029 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-~~~---------~~~~~ 1029 (1088)
.....+.++.|.+|+|||.+-+ .+|+..+||||+||++.||++|.+.|.+..+-..-+.- ... -+...
T Consensus 154 -pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 154 -PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred -CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 2334566788999999997655 89999999999999999999999999987552221111 111 00111
Q ss_pred CCCcccc-c-hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 GPGRAVI-P-VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 ~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+. + +.-........+.....++++++.|++.||++|++-++++.
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111000 0 00000111112334457889999999999999999998863
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=357.06 Aligned_cols=266 Identities=25% Similarity=0.311 Sum_probs=210.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccch-HHHHHHHHHHhCCCCCCC-CCceeEEeeEEecCC-e
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE-REFRAEMEVLSGNGFGWP-HPNLVTLYGWCLDGS-E 879 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~~~~~l~-h~niv~l~~~~~~~~-~ 879 (1088)
.++|.+.+.||.|.||.||+|+.+ +|..||||++++....-+ -.-.+|++.+++ +. ||||+++.+++.+.+ .
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~k----ln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRK----LNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHh----cCCCCcchhhHHHhhccCce
Confidence 457899999999999999999965 689999999987643322 234579999987 55 999999999999888 9
Q ss_pred EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.|+|||||+. +|++++++++ .+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+|+.+
T Consensus 85 L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 85 LYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred EeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 9999999976 9999998764 599999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcccccccccccccCccc-cCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhh-hccCCCCCCcc--
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEY-GQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRV-MGYGRHGPGRA-- 1034 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~-- 1034 (1088)
.. ..+.+.++.|.+|+|||+ ++.+.|+.+.||||+|||++|+.+-++.|.+..+...-|.-.. ++-.......+
T Consensus 161 ~S--kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 161 RS--KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred cc--CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 53 334567889999999995 6678999999999999999999999999998866333332221 11111000000
Q ss_pred --------ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1035 --------VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1035 --------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.++...........+.+..+.++++.+|+..||.+||||+++++.
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 000000000011123366789999999999999999999999863
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=349.96 Aligned_cols=252 Identities=29% Similarity=0.438 Sum_probs=203.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC--eEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS--EKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~--~~~ 881 (1088)
.+|...+.||+|+||.||++... +|+.+|||.+........+.+.+|+.++.+ ++|||||+++|...... .++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~----l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSR----LNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHh----CCCCCEEeeCCccccccCeeeE
Confidence 45777899999999999999976 489999999987643335668999999997 67999999999754444 689
Q ss_pred EEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-CCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-EGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-~~~~kl~Dfg~a~~~~ 959 (1088)
+.|||+++|+|.+++.+.+ ++++..+++++.||++||+|||++ +||||||||+|||++. ++.+||+|||.++...
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 9999999999999999877 799999999999999999999999 9999999999999999 7999999999998766
Q ss_pred C--CCCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 960 A--GDSHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 960 ~--~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
. ..........||+.|||||++..+ ....++||||+||++.||+||+.||... ....++...+.... ..
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~-------~~ 241 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGRED-------SL 241 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccC-------CC
Confidence 3 112234457899999999999853 3345999999999999999999999863 11122222221000 01
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+ ..+...+.+..+++.+|+..||++||||+++++.
T Consensus 242 P--------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 242 P--------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred C--------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 1 1233455678889999999999999999999864
No 18
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-39 Score=361.36 Aligned_cols=249 Identities=27% Similarity=0.419 Sum_probs=209.5
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC----c-cchHHHHHHHHHHhCCCCCCC-CCceeEEeeEE
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG----L-EGEREFRAEMEVLSGNGFGWP-HPNLVTLYGWC 874 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~-~~~~~~~~E~~~l~~~~~~l~-h~niv~l~~~~ 874 (1088)
...++|.+.+.||+|+||+|+.|.+. +++.||+|++.+.. . ...+.+.+|+.++++ ++ ||||+++++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~----~~~HpnI~~l~ev~ 89 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRR----LRSHPNIIRLLEVF 89 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHH----hccCCCEeEEEEEE
Confidence 34578999999999999999999865 68999999776642 2 234567789999987 55 99999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC-CCEEEeecc
Q 001384 875 LDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE-GKALVTDFG 953 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~-~~~kl~Dfg 953 (1088)
......|+||||+.||+|.+++.+.+++.+.++++++.|++.|++|+|++ +|+||||||+||+++.+ +.+||+|||
T Consensus 90 ~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 90 ATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred ecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 99999999999999999999999989999999999999999999999999 99999999999999999 999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCCCC-CC-cchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQ-AT-TKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1088)
++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||.+........ .+. .
T Consensus 167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~--ki~------~ 237 (370)
T KOG0583|consen 167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYR--KIR------K 237 (370)
T ss_pred cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHH--HHh------c
Confidence 998764 3344567789999999999999877 75 78999999999999999999999854322211 111 0
Q ss_pred CccccchhhcCCCccccHHH-HHHHHHHHhhhcccCCCCCCCHHHHH
Q 001384 1032 GRAVIPVVLLGSGLAEGAEE-MSELLRIGVRCTAEAPNARPNVKEVL 1077 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~eil 1077 (1088)
..-.+ +... ..++..++.+|+..||.+|+++.||+
T Consensus 238 ~~~~~-----------p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 238 GEFKI-----------PSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCccC-----------CCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 11111 1112 46788899999999999999999998
No 19
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-40 Score=369.39 Aligned_cols=257 Identities=26% Similarity=0.433 Sum_probs=222.0
Q ss_pred CCccceecccCceEEEEEEeC-C---CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-D---GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
..+.++||.|.||.||+|+++ . ...||||.++....+ .+.+|..|+.+|.+ +.||||+++.|+.......+
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ----FdHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ----FDHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc----CCCCcEEEEEEEEecCceeE
Confidence 456789999999999999976 2 346999999976544 45689999999997 78999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||+|||++|+|+.+++.+ +++++-++..+.++||.||.||.++ ++|||||.++||||+++-.+|++|||+++...+
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 999999999999999765 4799999999999999999999999 999999999999999999999999999998755
Q ss_pred CCCcccc--cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 961 GDSHVST--TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 961 ~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
+.....+ ...-+.+|.|||.+..+.++.++||||||++|||.++ |.+||=+.. ..+++.
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS------------------NQdVIk 845 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------------------NQDVIK 845 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc------------------hHHHHH
Confidence 4322222 2334579999999999999999999999999999776 888875432 234444
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCCCC
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPHCD 1088 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~ 1088 (1088)
.+-.+.+++.|.+++..+.+|+..||++|-.+||.+.+|+.+|.+++.+.+
T Consensus 846 aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 846 AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 555566777889999999999999999999999999999999999998753
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1e-39 Score=354.03 Aligned_cols=246 Identities=28% Similarity=0.441 Sum_probs=213.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc--hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG--EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+..... -+.+.+|+++++. ++|||||.++++|+...+.+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~----lkHpniv~m~esfEt~~~~~ 77 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRS----LKHPNIVEMLESFETSAHLW 77 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHh----cCCcchhhHHHhhcccceEE
Confidence 57888899999999999999976 67899999998764333 2568999999997 78999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+|+||+.| +|..++...+.++++.++.++.|++.||.|||+. +|.|||+||+||+++..+.+|++|||+|+.+..
T Consensus 78 vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 78 VVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred EEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 99999987 9999999999999999999999999999999999 999999999999999999999999999998765
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
.....+...||+.|||||.+.+.+|+..+|.||+||++|||++|++||... .+.+..+.+...+.
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--si~~Lv~~I~~d~v------------- 217 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--SITQLVKSILKDPV------------- 217 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--HHHHHHHHHhcCCC-------------
Confidence 344566788999999999999999999999999999999999999999863 23333333331111
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+......+.+++...+.+||.+|.+..+++.
T Consensus 218 ----~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 ----KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ----CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 124456678899999999999999999988763
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-39 Score=350.86 Aligned_cols=266 Identities=24% Similarity=0.310 Sum_probs=208.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--Ce
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--SE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~~ 879 (1088)
+.|+..++||+|.||.||+|++. +|+.||+|+++.+.. ..-....+|+.+|++ +.||||+++.+...+. ..
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~----l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRR----LDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHh----cCCCcccceeeEEEecCCce
Confidence 45777899999999999999964 799999999987642 333567799999997 7899999999998876 68
Q ss_pred EEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.|+|+|||+. +|.-++... -++++.++..+++|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+.+
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 9999999988 999988764 3799999999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCcccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCCCc-cc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGPGR-AV 1035 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 1035 (1088)
........+..+-|.+|.|||.+. ...|+.++|+||.|||+.||++|++.|.+..+ .-.+-......-.....+. ..
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 877766677788999999999654 56899999999999999999999999998765 1112222222111111111 00
Q ss_pred cchhhcCCCccc--------cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1036 IPVVLLGSGLAE--------GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1036 ~~~~~~~~~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
++..-....... ........++|+..+|..||.+|.||.++++
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 010000000000 1112345778888999999999999999874
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=356.90 Aligned_cols=249 Identities=30% Similarity=0.451 Sum_probs=213.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
..|.....||+|+.|.||.|... +++.||||++.......++-+.+|+.+|+. .+|+|||++++.|..++..|+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~----~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRD----LHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHh----ccchHHHHHHHHhcccceeEEE
Confidence 45777789999999999999954 688999999998877777788999999996 6899999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||||+||+|.|.+... .+++.+++.|.+++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 349 MEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred EeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999999998654 499999999999999999999999 999999999999999999999999999988765433
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
.....+||+.|||||++....|++|+||||||+++.||+-|++||-...+.-..|.-..- +. .
T Consensus 425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-----g~-----------P 487 (550)
T KOG0578|consen 425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-----GT-----------P 487 (550)
T ss_pred -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-----CC-----------C
Confidence 456678999999999999999999999999999999999999999875442222222111 11 1
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+......+.+|+.+||+.||++||++.|+++
T Consensus 488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 12234556678889999999999999999999986
No 23
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-39 Score=356.58 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=208.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
+-|++++.||.|+.|.|-.|++. +|+.+|||++.+... .....+.+|+-+|+. +.|||++++|+++++..++
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkL----i~HpnVl~LydVwe~~~~l 87 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKL----IEHPNVLRLYDVWENKQHL 87 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHH----hcCCCeeeeeeeeccCceE
Confidence 45788899999999999999975 799999999987632 223467889999886 6899999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+|.||++||.|.+++-++++++++++++++.||+.|++|+|.. +|+|||+||+|+|+|..+.+||+|||+|..-.
T Consensus 88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~- 163 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV- 163 (786)
T ss_pred EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQA-TTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
......+.+|.+.|.|||++.+.+| +.++||||+|||+|.++||+.||++++- .....+......
T Consensus 164 -~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi--r~LLlKV~~G~f----------- 229 (786)
T KOG0588|consen 164 -PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI--RVLLLKVQRGVF----------- 229 (786)
T ss_pred -CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH--HHHHHHHHcCcc-----------
Confidence 2334567899999999999999988 5789999999999999999999996543 222111110001
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.-|.....++.+|+.+|++.||++|.+++||.+
T Consensus 230 ------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 230 ------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred ------cCCCcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 113344567888999999999999999999976
No 24
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.5e-39 Score=349.22 Aligned_cols=246 Identities=25% Similarity=0.337 Sum_probs=201.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
.++|+...+||+|+||.||+|+-+ +|..+|+|++++..... .+.++.|-.+|.. ..+|.||++|..|.+...
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~----~ds~~vVKLyYsFQD~~~ 215 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE----VDSPWVVKLYYSFQDKEY 215 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh----cCCCcEEEEEEEecCCCe
Confidence 467999999999999999999965 69999999999875433 3567889888876 479999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.|+||||++||++..+|.+.+.+++..++.++.+++.|++-+|+. |+|||||||+|+|||..|++||+|||++..+.
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999999999999999999999999999999999999 99999999999999999999999999985321
Q ss_pred C----------------------CCCc----c--------------------cccccccccccCccccCCCCCCcchhHH
Q 001384 960 A----------------------GDSH----V--------------------STTIAGTVGYVAPEYGQTWQATTKGDVY 993 (1088)
Q Consensus 960 ~----------------------~~~~----~--------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dvw 993 (1088)
. .+.. . ....+|||.|+|||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1 0000 0 0124699999999999999999999999
Q ss_pred HHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC
Q 001384 994 SFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN 1072 (1088)
Q Consensus 994 slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1072 (1088)
|+|||+|||+.|-+||.+.++ .+..+.++.+...... + .......+..++|.+|+. ||++|..
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp--~~T~rkI~nwr~~l~f----P---------~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETP--QETYRKIVNWRETLKF----P---------EEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhhhccC----C---------CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999998654 1222222222211110 0 112223678889999999 9999986
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.9e-38 Score=315.95 Aligned_cols=266 Identities=24% Similarity=0.308 Sum_probs=207.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.+|...+++|+|.||.||+|++. +|+.||||+++..... -.....+|++.++. ++|+||+.++++|...+...
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqe----l~h~nIi~LiD~F~~~~~l~ 77 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQE----LKHPNIIELIDVFPHKSNLS 77 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHH----ccCcchhhhhhhccCCCceE
Confidence 46788899999999999999965 7999999999865322 23567899999997 78999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+|+|||+. +|+..+++.. .++..++..++.++++|++|+|++ .|+||||||.|+||+++|.+||+|||+|+.+..
T Consensus 78 lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 78 LVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred EEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 99999977 9999998755 589999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCcccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhh--ccCCCCCCcccc
Q 001384 961 GDSHVSTTIAGTVGYVAPEYG-QTWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVM--GYGRHGPGRAVI 1036 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~ 1036 (1088)
.+..... .+-|..|.|||.+ ....|+..+||||.||++.||+-|.+-|.+..+ +-.....+.. +-...++....+
T Consensus 154 p~~~~~~-~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 154 PNRIQTH-QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred CCccccc-ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 5543333 3678999999965 456899999999999999999998877777644 1112222222 111112222111
Q ss_pred chhhcCC------CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1037 PVVLLGS------GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1037 ~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+....-. ....-+.+..+..+++.+|+..+|.+|++++|+++.
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111100 000123345667999999999999999999999763
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=334.25 Aligned_cols=259 Identities=29% Similarity=0.394 Sum_probs=207.5
Q ss_pred cCCCCccceecccCceEEEEEEe-CCCcEEEEEEccccCccch-HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVL-PDGREVAVKKLQREGLEGE-REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.+.|++...||.|..++||+|+. ..++.||||++.-+..... +.+++|+..++. ++||||++++..|..+...|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl----~~HPNIv~~~~sFvv~~~LW 100 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSL----IDHPNIVTYHCSFVVDSELW 100 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhh----cCCCCcceEEEEEEecceeE
Confidence 35799999999999999999995 4689999999987766655 778999999986 78999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
+||.||.+|++.++++... .+.+..+..|.+++++||.|||++ |.||||||+.||||+++|.|||+|||.+..+.
T Consensus 101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 9999999999999998743 489999999999999999999999 99999999999999999999999999876554
Q ss_pred CCC-Ccc-c-ccccccccccCccccC--CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 960 AGD-SHV-S-TTIAGTVGYVAPEYGQ--TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 960 ~~~-~~~-~-~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
... ... . ..+.||+.|||||++. -..|+.|+||||||+...|+.+|..||....+.-+-...- ....+.-.
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL----qn~pp~~~ 253 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL----QNDPPTLL 253 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh----cCCCCCcc
Confidence 322 211 1 4578999999999843 3479999999999999999999999998775532211111 00010000
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ..............+.+++..|+++||++|||++++++
T Consensus 254 --t---~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 254 --T---SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred --c---ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0 00011112233457888999999999999999999875
No 27
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=354.17 Aligned_cols=264 Identities=27% Similarity=0.391 Sum_probs=211.8
Q ss_pred HHHHHHcCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccch--HHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 798 SDILKATGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGE--REFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 798 ~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
.++....+++.+.+.||+|.||+||+|++. -.||||++.......+ +.|++|+.++++ -+|.||+=|.|||.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkk----TRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKK----TRHENILLFMGACM 458 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhh----cchhhheeeehhhc
Confidence 344444556778899999999999999985 3599999987765443 679999999997 46999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccc
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGL 954 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~ 954 (1088)
.+.. .||+.+|+|-+|+.+++.. .+++..+.+.||.|||+||.|||.+ +|||||||..||++.++++|||+|||+
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred CCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccc
Confidence 8887 9999999999999999864 4799999999999999999999999 999999999999999999999999999
Q ss_pred ceeecCC-CCcccccccccccccCccccCC---CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC
Q 001384 955 ARVVSAG-DSHVSTTIAGTVGYVAPEYGQT---WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG 1030 (1088)
Q Consensus 955 a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1030 (1088)
+.....- .........|...|||||++.. .+|++.+||||||+|+|||+||..||.....+.+-|...
T Consensus 535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG-------- 606 (678)
T KOG0193|consen 535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG-------- 606 (678)
T ss_pred eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec--------
Confidence 9764321 1222334457788999998663 489999999999999999999999998543322222111
Q ss_pred CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1031 PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.+.-..+ .......++.++.+|+..||..++++||.+.+|+..|+++++
T Consensus 607 rG~l~pd------~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 607 RGYLMPD------LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccccCcc------chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1110111 111234566788889999999999999999999999998875
No 28
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=385.90 Aligned_cols=258 Identities=33% Similarity=0.509 Sum_probs=218.5
Q ss_pred CCCCccceecccCceEEEEEEeC--CCc----EEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP--DGR----EVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
.+.+..+.||+|+||.||.|... .|. .||||.+.+.. .....+|..|..+|+. +.|||||+++|++.+.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~----f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSK----FDHPNIVSLIGVCLDS 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhc----CCCcceeeEEEeecCC
Confidence 34566789999999999999964 343 49999998764 3445689999999997 7899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEe
Q 001384 878 SEKILVYEYMEGGSLEDIISDR-------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVT 950 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~ 950 (1088)
...++++|||++|+|..+|++. ..++..+...++.|||+|+.||+++ ++|||||.++|+|+++...|||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 9999999999999999999876 2489999999999999999999999 99999999999999999999999
Q ss_pred ecccceeecCCCCcccccc-cccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCC
Q 001384 951 DFGLARVVSAGDSHVSTTI-AGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGR 1028 (1088)
Q Consensus 951 Dfg~a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1088)
|||+|+.....+.+..... .-+.+|||||.+..+.++.|+|||||||++||++| |..||.+...
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-------------- 910 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-------------- 910 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch--------------
Confidence 9999996655554443332 44579999999999999999999999999999999 7778776432
Q ss_pred CCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCCC
Q 001384 1029 HGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPHC 1087 (1088)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 1087 (1088)
.+++.....+.+.+.|..++..+++++..||+.+|++||++.+|+++++.++..+
T Consensus 911 ----~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 911 ----FEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred ----HHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 2222333344466678889999999999999999999999999999999887543
No 29
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=356.97 Aligned_cols=243 Identities=26% Similarity=0.366 Sum_probs=203.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccch---HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE---REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
.++|...++||+|+||+|++|..+ +++.+|||++++..+-.+ +..+.|-+++..+. +||.+++++.+|+..++
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~---~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN---RHPFLVNLFSCFQTKEH 443 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc---cCCeEeecccccccCCe
Confidence 356889999999999999999987 678999999999865443 45677888887654 79999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.|.||||+.||++..+ +..+.+++..++.||..|+.||.|||++ +|||||||.+|||+|.+|++||+|||+++.--
T Consensus 444 l~fvmey~~Ggdm~~~-~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHH-IHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEEecCCCcEEEE-EecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999994443 3446799999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
. ....+.+++||+.|+|||++.+..|+..+|+|||||++|||+.|+.||.+.+++.. ++.+
T Consensus 520 ~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~------------------FdsI 580 (694)
T KOG0694|consen 520 G-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV------------------FDSI 580 (694)
T ss_pred C-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH------------------HHHH
Confidence 2 22356789999999999999999999999999999999999999999998765222 1111
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
+... ...|.-...+.++++++++.++|++|..+
T Consensus 581 ~~d~-~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 581 VNDE-VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred hcCC-CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1111 11234456788899999999999999966
No 30
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.2e-39 Score=333.01 Aligned_cols=246 Identities=26% Similarity=0.459 Sum_probs=211.8
Q ss_pred cCCCCccceecccCceEEEEEEe-CCCcEEEEEEccccCccchH---HHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVL-PDGREVAVKKLQREGLEGER---EFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
..+|++.+.||+|.||+|-+|.. ..|+.||||.++++.+..++ .+++|+++|+. ++||||+.+|++|+..+.
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSs----LNHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSS----LNHPHIIQIYEVFENKDK 127 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhh----cCCCceeehhhhhcCCce
Confidence 45788999999999999999996 58999999999998877665 47899999997 789999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
..+||||..+|.|+||+.+++.+++.+++.+++||..|+.|+|.+ ++||||||.+|||+|.++.+||+|||++-.+.
T Consensus 128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence 999999999999999999999999999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQA-TTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
. .....+++|++-|.+||++.+.+| ++.+|-||+||++|-++.|..||++.+.... .+++.
T Consensus 205 ~--~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l--vrQIs-------------- 266 (668)
T KOG0611|consen 205 D--KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL--VRQIS-------------- 266 (668)
T ss_pred c--ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH--HHHhh--------------
Confidence 3 345678999999999999999988 5789999999999999999999998654211 11111
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+.. ..+..+....-+|++|+..+|++|.|..||..
T Consensus 267 --~GaY--rEP~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 267 --RGAY--REPETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred --cccc--cCCCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 1110 01223345566888999999999999999864
No 31
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.9e-38 Score=357.81 Aligned_cols=260 Identities=27% Similarity=0.436 Sum_probs=204.6
Q ss_pred cCCCCccceecccCceEEEEEEe------CCCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVL------PDGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
.++|++.+.||+|+||.||+|.+ .+++.||||++..... .....+.+|++++..+. +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---~h~niv~~~~~~~~ 82 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG---NHLNVVNLLGACTK 82 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc---cCcceeeEEeEecC
Confidence 35799999999999999999974 2356899999976432 23356889999998732 79999999998876
Q ss_pred C-CeEEEEEEecCCCCHHHHHhhc--------------------------------------------------------
Q 001384 877 G-SEKILVYEYMEGGSLEDIISDR-------------------------------------------------------- 899 (1088)
Q Consensus 877 ~-~~~~lv~e~~~~gsL~~~l~~~-------------------------------------------------------- 899 (1088)
. ...++||||+++|+|.+++...
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4 4688999999999999998652
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc-cccccccc
Q 001384 900 ------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH-VSTTIAGT 972 (1088)
Q Consensus 900 ------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt 972 (1088)
.++++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ ......++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 2377889999999999999999999 9999999999999999999999999999865432221 12234456
Q ss_pred ccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHH
Q 001384 973 VGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEE 1051 (1088)
Q Consensus 973 ~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1088)
..|+|||++.+..++.++|||||||++|||++ |..||.+..... .+...... .. ....+...
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~-~~---------------~~~~~~~~ 302 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKD-GT---------------RMRAPENA 302 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhc-CC---------------CCCCCCCC
Confidence 78999999988899999999999999999997 999998643211 11111110 00 00012223
Q ss_pred HHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1052 MSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1052 ~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
...+.+++.+|++.||++||++.|+++.|++++..
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 45688999999999999999999999999998753
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=343.34 Aligned_cols=248 Identities=30% Similarity=0.455 Sum_probs=209.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc-hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG-EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
..|+..+.||+|+||.||+|.+. .++.||+|++.-+..+. .+++++|+.++.. ++++||.++|+.+..+...++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~----~~~~~it~yygsyl~g~~Lwi 88 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQ----CDSPNITEYYGSYLKGTKLWI 88 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHh----cCcchHHhhhhheeecccHHH
Confidence 35777789999999999999975 68899999998765444 3678999999997 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
+||||.||++.+.++....+++.+...+.+++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||.+..+....
T Consensus 89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999999999888889999999999999999999999 99999999999999999999999999998776543
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.. ...++||+.|||||++....|+.|+||||||++.+||.+|.+|+....+. +... -+.+..++.+
T Consensus 166 ~r-r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-----rvlf------lIpk~~PP~L-- 231 (467)
T KOG0201|consen 166 KR-RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-----RVLF------LIPKSAPPRL-- 231 (467)
T ss_pred hc-cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-----eEEE------eccCCCCCcc--
Confidence 33 36789999999999999989999999999999999999999999875431 0000 0111111221
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+.+++..|+++||+.||+|.++++
T Consensus 232 -----~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 232 -----DGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -----ccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 2244556888888999999999999999986
No 33
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=344.67 Aligned_cols=239 Identities=26% Similarity=0.436 Sum_probs=207.0
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCC
Q 001384 810 DRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEG 889 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 889 (1088)
.+-||+|+.|.||.|+.+ ++.||||+++.-. ..+++-|++ ++||||+.|.|+|.....+|||||||..
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRk----LkH~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRK----LKHPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHh----ccCcceeeEeeeecCCceeEEeeecccc
Confidence 466999999999999985 7899999997542 235666765 7899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcccccc
Q 001384 890 GSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTTI 969 (1088)
Q Consensus 890 gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 969 (1088)
|.|+..++....++....+.|.++||.||.|||.+ .|||||||.=||||+.+..|||+|||.++..... -....+
T Consensus 197 GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSF 271 (904)
T KOG4721|consen 197 GQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSF 271 (904)
T ss_pred ccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhh
Confidence 99999999999999999999999999999999999 9999999999999999999999999999877543 234568
Q ss_pred cccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccH
Q 001384 970 AGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGA 1049 (1088)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1088)
+||..|||||++...+.++|+||||||||||||+||..||.+-+...+-|....- ...++.|.
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsN-----------------sL~LpvPs 334 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSN-----------------SLHLPVPS 334 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCC-----------------cccccCcc
Confidence 9999999999999999999999999999999999999999876554444422211 01233467
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1050 EEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1050 ~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.++..+.=|+++||+..|..||++++|+.-|+-
T Consensus 335 tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 335 TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 788888889999999999999999999988763
No 34
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=331.71 Aligned_cols=253 Identities=26% Similarity=0.357 Sum_probs=201.8
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--------------chHHHHHHHHHHhCCCCCCCCCc
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--------------GEREFRAEMEVLSGNGFGWPHPN 866 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~~~~~l~h~n 866 (1088)
+..++|++.+.||+|.||.|-+|+.. +++.||||++.+.... .-+.+++|+.++++ ++|||
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk----l~H~n 169 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK----LHHPN 169 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh----cCCcC
Confidence 44578999999999999999999975 7899999999754311 12578999999997 78999
Q ss_pred eeEEeeEEecC--CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC
Q 001384 867 LVTLYGWCLDG--SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE 944 (1088)
Q Consensus 867 iv~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~ 944 (1088)
||+++++..+. +..|||+|||..|.+...-.....+++.++++|+.+++.||+|||.+ +||||||||+|+|++++
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 99999998764 67899999999988765433333399999999999999999999999 99999999999999999
Q ss_pred CCEEEeecccceeecCCCCc----ccccccccccccCccccCCC----CCCcchhHHHHHHHHHHHHhCCcCCCCCchhH
Q 001384 945 GKALVTDFGLARVVSAGDSH----VSTTIAGTVGYVAPEYGQTW----QATTKGDVYSFGVLAMELATGRRALEGGEECL 1016 (1088)
Q Consensus 945 ~~~kl~Dfg~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~ 1016 (1088)
|++||+|||.+..+..+... .....+||+.|+|||...++ ..+.+.||||+||+||.|+.|+.||.+...
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~-- 324 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE-- 324 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--
Confidence 99999999999877443221 12346899999999987663 236788999999999999999999987432
Q ss_pred HHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1017 VEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+..+.+...... .+..++...++.++|++++++||++|.+..||..
T Consensus 325 ~~l~~KIvn~pL~---------------fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 325 LELFDKIVNDPLE---------------FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred HHHHHHHhcCccc---------------CCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 2233333311111 1112244567889999999999999999999864
No 35
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=352.86 Aligned_cols=254 Identities=30% Similarity=0.446 Sum_probs=207.6
Q ss_pred CCCccceecccCceEEEEEEeCC--C--cE-EEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPD--G--RE-VAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~--~--~~-vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
+-.+.++||+|+||.||+|.++. + .. ||||..+... .....++.+|+++++. ++|||||++||++...
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~----l~H~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQ----LNHPNVVRFYGVAVLE 233 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHh----CCCCCEEEEEEEEcCC
Confidence 34455899999999999999653 2 23 8999998532 3445789999999997 7899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 SEKILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++|||+|+||+|.+++++.. .++..+...++.+.|+||+|||++ ++|||||.++|+|++.++.+||+|||+++
T Consensus 234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 99999999999999999999877 499999999999999999999999 99999999999999999999999999987
Q ss_pred eecCCCCcccc-cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchh-HHHHHHhhhccCCCCCCc
Q 001384 957 VVSAGDSHVST-TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEEC-LVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 957 ~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 1033 (1088)
.-. ...... ...-+.+|+|||.+....|++++|||||||++||+++ |..||.+.... ...+...
T Consensus 311 ~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~----------- 377 (474)
T KOG0194|consen 311 AGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK----------- 377 (474)
T ss_pred CCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh-----------
Confidence 532 111111 2245689999999999999999999999999999999 88999886542 2222111
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
.+.+...+...+..+..++.+|+..+|++||+|.++.+.++.+.+.
T Consensus 378 -------~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 378 -------NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred -------cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 0111112334456777788899999999999999999999998654
No 36
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-37 Score=328.11 Aligned_cols=268 Identities=29% Similarity=0.416 Sum_probs=205.6
Q ss_pred CCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC----eEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS----EKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~----~~~l 882 (1088)
.+..++||+|.||.||||.+. ++.||||++... .++.|.+|-++.+... ++|+||++|+++-.... .+++
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~--m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPG--MKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccC--ccchhHHHhhchhccCCccccceeE
Confidence 445688999999999999985 699999999754 5678999999988765 89999999999876555 8899
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHEC------YPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~------~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
|+||.+.|+|.+|++.+. ++|.+..+|+..+++||+|||+.. .|+|+|||||.+||||.+|++..|+|||+|.
T Consensus 286 Vt~fh~kGsL~dyL~~nt-isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANT-ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred EeeeccCCcHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 999999999999998765 899999999999999999999863 4789999999999999999999999999999
Q ss_pred eecCCCCc-ccccccccccccCccccCCCC------CCcchhHHHHHHHHHHHHhCCcCCCC-C-chhHHHHHHhhhccC
Q 001384 957 VVSAGDSH-VSTTIAGTVGYVAPEYGQTWQ------ATTKGDVYSFGVLAMELATGRRALEG-G-EECLVEWGRRVMGYG 1027 (1088)
Q Consensus 957 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~~l~elltg~~p~~~-~-~~~~~~~~~~~~~~~ 1027 (1088)
++.++... .....+||.+|||||++.+.- .-.+.||||+|.++|||++.-..+.. . .+....+...+ +
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev---G 441 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV---G 441 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh---c
Confidence 98754332 233478999999999877642 12368999999999999985544421 1 11111111111 1
Q ss_pred CCCCCccccchhhcCCCccccH------HHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1028 RHGPGRAVIPVVLLGSGLAEGA------EEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
.+...+++....+.....+..+ ..+..+.+.+..||+.||+.|.|+.=|-+.+.++.
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 2222233333333333332222 23456888999999999999999998888887764
No 37
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=336.10 Aligned_cols=261 Identities=26% Similarity=0.369 Sum_probs=216.5
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccc-hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG-EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
.....+.++||+|.||.|..+....+..||||+++..+... .++|.+|+++|.+ ++||||++++|+|..++.+++
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsq----LkhPNIveLvGVC~~DePicm 612 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSR----LKHPNIVELLGVCVQDDPLCM 612 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhc----cCCCCeeEEEeeeecCCchHH
Confidence 45677889999999999999999778999999999875544 4789999999997 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDRTR--LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+|||++|+|..++.++.. .......+|+.|||.||+||.+. ++|||||.++|+|++.++++||+|||+++.+..
T Consensus 613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence 9999999999999987742 34566678999999999999998 999999999999999999999999999997766
Q ss_pred CCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh--CCcCCCCCch-hHHHHHHhhhccCCCCCCcccc
Q 001384 961 GDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT--GRRALEGGEE-CLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 961 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
++.+. ....+-+.+|||||.+.-++++.++|||+||+.+||+++ .+.||....+ ..++-.-... .... .
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~---~~~~-~--- 762 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFF---RDQG-R--- 762 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhc---CCCC-c---
Confidence 66554 345667889999999888899999999999999999664 7888876644 2222222221 1111 1
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
...+..|.-++..+++++.+||..|-++||+++++...|.+.
T Consensus 763 -----~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 763 -----QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -----ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 112233667788999999999999999999999999988764
No 38
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-38 Score=306.57 Aligned_cols=246 Identities=28% Similarity=0.411 Sum_probs=208.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.... -+.++++|+++-+. ++||||+++|++|.++...
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~----L~hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSH----LRHPNILRLYGYFHDSKRI 97 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecc----cCCccHHhhhhheecccee
Confidence 46899999999999999999965 6778999999876432 34678888888775 7899999999999999999
Q ss_pred EEEEEecCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 881 ILVYEYMEGGSLEDIIS--DRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
|+++||.++|+++..++ ...++++..++.++.|+|.|+.|+|.. +|+||||||+|+|++.++.+|++|||.+...
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999999999998 566799999999999999999999999 9999999999999999999999999998764
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
. .....+.+||..|.|||...+..++..+|+|++|++.||++.|.+||+.... .+-++++... +
T Consensus 175 p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--~etYkrI~k~------~----- 238 (281)
T KOG0580|consen 175 P---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--SETYKRIRKV------D----- 238 (281)
T ss_pred C---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--HHHHHHHHHc------c-----
Confidence 3 3345678999999999999999999999999999999999999999987542 2222222210 1
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
...+......+.++|.+|+..+|.+|....|+++-
T Consensus 239 ------~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 239 ------LKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ------ccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 11123344678889999999999999999998763
No 39
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.2e-37 Score=336.37 Aligned_cols=255 Identities=24% Similarity=0.351 Sum_probs=205.0
Q ss_pred CCCCccceecccCceEEEEEEeC----CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP----DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
++|++.+.||+|+||.||+|.++ .+..||+|+++.... .....+.+|+..+.+ ++||||+++++++..++.
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQ----FDHSNIVRLEGVITRGNT 80 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhc----CCCCCcCeEEEEEecCCC
Confidence 46888999999999999999853 356899999986532 233568889999886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.++||||+++|+|.+++... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.++++|||.+...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999999999764 4789999999999999999999999 9999999999999999999999999987653
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
............++..|+|||.+.+..++.++|||||||++||+++ |+.||...... +.......
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~------------ 223 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVED------------ 223 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHC------------
Confidence 2221111122345678999999988899999999999999999775 99999765431 11111110
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
+...+.+...+..+.+++.+|++.+|++||++++|.+.|++++
T Consensus 224 ----~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 224 ----GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 0001112334567888999999999999999999999998864
No 40
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-37 Score=324.72 Aligned_cols=265 Identities=27% Similarity=0.374 Sum_probs=208.3
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC----CeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG----SEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~----~~~ 880 (1088)
.+..+.+.||+|.||.||+|.++ |+.||||++... .++.+.+|.++++.+. ++|+||+.|++....+ ...
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvm--LRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVM--LRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHH--hccchhhhhhhccccCCCceEEE
Confidence 56778899999999999999995 899999999864 5678999999998776 8999999999987654 367
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHE-----CYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~-----~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
++|++|.+.|+|+||+.+ ..++.+...+++..+|.||+|||.. ..|.|.|||||+.||||.+++.+.|+|+|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred EEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 999999999999999988 5699999999999999999999975 4589999999999999999999999999999
Q ss_pred eeecCCCCc---ccccccccccccCccccCCCC------CCcchhHHHHHHHHHHHHh----------CCcCCCCCchhH
Q 001384 956 RVVSAGDSH---VSTTIAGTVGYVAPEYGQTWQ------ATTKGDVYSFGVLAMELAT----------GRRALEGGEECL 1016 (1088)
Q Consensus 956 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~~l~ellt----------g~~p~~~~~~~~ 1016 (1088)
......... .....+||.+|||||++...- .-..+||||||.++||+.. -+.||.+..+..
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D 443 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD 443 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence 887654322 245678999999999876531 1246899999999999985 344555432211
Q ss_pred HHHHHhhhccCCCCCCccccchhh-cCC--CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1017 VEWGRRVMGYGRHGPGRAVIPVVL-LGS--GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
..++.. ++++.... ... ..-...+....+.++++.||..+|..|.++-.|.+.|.++.+.
T Consensus 444 Ps~eeM----------rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 444 PSFEEM----------RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred CCHHHH----------hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 111111 11111000 000 0112456778899999999999999999999999999998753
No 41
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=337.06 Aligned_cols=246 Identities=22% Similarity=0.324 Sum_probs=201.4
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEec----CCeEEEE
Q 001384 811 RIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD----GSEKILV 883 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~----~~~~~lv 883 (1088)
..||+|++|.||+|.+ +|+.||||++....... .+.+.+|+.++.+ ++||||+++++++.+ ....++|
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~----l~h~nIv~~~g~~~~~~~~~~~~~lv 100 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRR----IDSNNILKIYGFIIDIVDDLPRLSLI 100 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHh----cCCCCEEEEeeeEEecccCCCceEEE
Confidence 6799999999999998 68999999998754333 3567799999997 679999999999876 3467899
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++|+|.++++....+++....+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 101 ~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 101 LEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred EEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 999999999999998888999999999999999999999842 78899999999999999999999999987654321
Q ss_pred cccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 964 HVSTTIAGTVGYVAPEYGQT--WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+... .+..........
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i~~~~~------------- 239 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLIINKNN------------- 239 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcCC-------------
Confidence 23457889999999875 6899999999999999999999999987543 122222210000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
....+...+..+.+++.+||+.||++||+++|+++.|+.+.
T Consensus 240 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 240 --SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred --CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 00112234567889999999999999999999999999864
No 42
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=338.83 Aligned_cols=256 Identities=27% Similarity=0.456 Sum_probs=223.3
Q ss_pred cCCCCccceecccCceEEEEEEeC---CCc--EEEEEEcccc-CccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP---DGR--EVAVKKLQRE-GLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~---~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
++.....++||+|.||.||+|... .|+ -||||..+.+ .....+.|.+|..+|+. ++||||++++|+|.+
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrn----fdHphIikLIGv~~e- 462 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRN----FDHPHIIKLIGVCVE- 462 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHh----CCCcchhheeeeeec-
Confidence 344556688999999999999953 233 4899999874 34556789999999987 789999999999975
Q ss_pred CeEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 SEKILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++|||.++-|.|..|++.+. .++......++.||+.||+|||+. .+|||||..+|||+.+..-+|++|||+++
T Consensus 463 ~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhh
Confidence 56799999999999999998754 689999999999999999999999 99999999999999999999999999999
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
.+.....+..+...-+..|||||.+.-.+++.++|||.|||++||++. |..||.+-. ..++
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk------------------NsDV 601 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK------------------NSDV 601 (974)
T ss_pred hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc------------------ccce
Confidence 998777776666677889999999999999999999999999999765 999998742 2444
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
+...-.|.+.+.|+.++..++.++.+||..||.+||.+.|+...|++++.
T Consensus 602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 55555677888899999999999999999999999999999999998864
No 43
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=342.18 Aligned_cols=249 Identities=28% Similarity=0.422 Sum_probs=214.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe-E
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE-K 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~-~ 880 (1088)
++|..++++|+|+||.++.++++ +++.+|+|.+.-.... .++...+|+.++++ ++|||||.+.+.|.+++. .
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~----~~hP~iv~y~ds~~~~~~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK----LLHPNIVEYKDSFEEDGQLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh----ccCCCeeeeccchhcCCceE
Confidence 57889999999999999999976 6789999999765433 33467889999997 689999999999999888 8
Q ss_pred EEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 881 ILVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
+|||+|++||++.+.+.+.+ -++++.+..|+.|++.|+.|||+. .|+|||||+.||+++.++.|||+|||+|+..
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhc
Confidence 99999999999999997654 589999999999999999999988 9999999999999999999999999999988
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.... .....+.||+.|++||++.+.+|..|+||||+||++|||++-+++|.+.+-. . .+..
T Consensus 157 ~~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~--~----------------Li~k 217 (426)
T KOG0589|consen 157 NPED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS--E----------------LILK 217 (426)
T ss_pred CCch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH--H----------------HHHH
Confidence 7543 2456688999999999999999999999999999999999999999875431 1 1112
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+..+...+.+.....++..+|..|+..+|+.||++.+++..
T Consensus 218 i~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 218 INRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 22222334466777899999999999999999999999875
No 44
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3e-41 Score=352.31 Aligned_cols=489 Identities=26% Similarity=0.384 Sum_probs=341.2
Q ss_pred EEeccccccccccccccccCCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCcc-cCCCCCCCceeeccccc
Q 001384 82 NGLNLTDWNISGDIFNNFSALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDL-NLSGLRSLEILDLSVNR 160 (1088)
Q Consensus 82 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~-~l~~l~~L~~L~Ls~N~ 160 (1088)
..+.+++|.+.. +.+.+.+|..|.+|++++|+++ ..|.+++.+..++.|+.++|+++... .+.++.+|..|+.++|.
T Consensus 48 ~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~ 125 (565)
T KOG0472|consen 48 QKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNE 125 (565)
T ss_pred hhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccc
Confidence 346667766654 3355777777888888888887 67777888888888888887777533 46666666667766666
Q ss_pred ccccccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCccccccccccCcccceecccCcccccccccccc
Q 001384 161 IHGEISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSVF 240 (1088)
Q Consensus 161 l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 240 (1088)
+. ..++.++.+..|..|+..+|+++. . +..+
T Consensus 126 ~~--------------------------el~~~i~~~~~l~dl~~~~N~i~s----------------------l-p~~~ 156 (565)
T KOG0472|consen 126 LK--------------------------ELPDSIGRLLDLEDLDATNNQISS----------------------L-PEDM 156 (565)
T ss_pred ee--------------------------ecCchHHHHhhhhhhhcccccccc----------------------C-chHH
Confidence 65 233446667778888888887752 1 2234
Q ss_pred cCCCccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcE
Q 001384 241 KENCSLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEV 320 (1088)
Q Consensus 241 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 320 (1088)
..+.+|..+++.+|+++...|..+ +++.|++||...|-+. .+|+.++.+.+|+.|+|.+|++.. +| +|..++.|.+
T Consensus 157 ~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~-lP-ef~gcs~L~E 232 (565)
T KOG0472|consen 157 VNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRF-LP-EFPGCSLLKE 232 (565)
T ss_pred HHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhccccc-CC-CCCccHHHHH
Confidence 455678888888888885545444 4999999999999887 889999999999999999999876 45 8999999999
Q ss_pred EEcCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccc
Q 001384 321 LDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNR 400 (1088)
Q Consensus 321 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 400 (1088)
|+++.|+|+..+.+....++++..||+.+|++.+ .+..++.+.+|++||+|+|.++ .+|.+++++ .|++|-+.+|.
T Consensus 233 lh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke--~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 233 LHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKE--VPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred HHhcccHHHhhHHHHhcccccceeeecccccccc--CchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCc
Confidence 9999999987777777777777777777777533 2445566777777777777777 567777777 77777777777
Q ss_pred cCCcCCcccCCCC---CCcEEE-------ccCCc----CCCCCCc----cccCCCCCcEEEccccccccCCCccccCCCC
Q 001384 401 FNGSIPAVYGNMP---NLQTLD-------LSFNE----LTGPIPP----SIGNLTSLLWLMLANNSLSGEIPGEIGNCTS 462 (1088)
Q Consensus 401 l~~~~p~~~~~l~---~L~~L~-------L~~N~----l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 462 (1088)
+. .+-..+-+.. -|++|. ++.-+ =++..|. ....+.+.+.|++++-+++ .+|.+...-..
T Consensus 309 lr-TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~ 386 (565)
T KOG0472|consen 309 LR-TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAK 386 (565)
T ss_pred hH-HHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhh
Confidence 75 2222221111 011111 11000 0011111 1234567889999999998 78887665555
Q ss_pred ---CCeEEccCCcCccCCCchhhccCCCCCccccccccCCcccccCCccccccccccCCCCCCCcceeeehhccccchhh
Q 001384 463 ---LLWLNLSNNKLSGNIPPEVMTIGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLW 539 (1088)
Q Consensus 463 ---L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 539 (1088)
.+..+++.|++. ++|..+..+..+.......|+.
T Consensus 387 ~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~------------------------------------------ 423 (565)
T KOG0472|consen 387 SEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNK------------------------------------------ 423 (565)
T ss_pred hcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCc------------------------------------------
Confidence 788999999998 8998776554332221111111
Q ss_pred hhcccCCcccccccCCCcccceeeeceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCccceEEEccC-
Q 001384 540 DRLLKGTGIFPVCLPGLASRTFQITGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLIVLNLTR- 618 (1088)
Q Consensus 540 ~~~~~~~~~~~~~l~~~~~~~~~~l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~l~~l~l~~- 618 (1088)
.+..|.. -..++.+..|+|++|-+. .+|.+++.+..|++||+++|+|. .+|..+-.+...++.+++
T Consensus 424 ------isfv~~~-----l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~ 490 (565)
T KOG0472|consen 424 ------ISFVPLE-----LSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASN 490 (565)
T ss_pred ------cccchHH-----HHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcc
Confidence 1111111 122345668999999998 89999999999999999999999 889887777555555555
Q ss_pred CcccccCCcc-ccCCccCcEEEccccccCCcCCcccccccccceeeccCCCCccccCCCCCcc--cccccCccCCCC
Q 001384 619 NNFSGEIPSE-FGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPLVSGTIPSTGQL--ATFEKTSYLGDP 692 (1088)
Q Consensus 619 N~l~~~~p~~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~g~ip~~~~~--~~~~~~~~~~n~ 692 (1088)
|++. .+|++ +.++.+|.+|||.+|.|. .||..+++|++|++|++++||++ .|...-+ +|..-.+|.+++
T Consensus 491 nqi~-~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr---~Pr~~iLmkgT~aiL~ylrdr 562 (565)
T KOG0472|consen 491 NQIG-SVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR---QPRHQILMKGTAAILSYLRDR 562 (565)
T ss_pred cccc-ccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC---CCHHHHhccChHHHHHHhccc
Confidence 6666 77666 999999999999999998 89999999999999999999993 4433211 344445566554
No 45
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.5e-36 Score=339.99 Aligned_cols=267 Identities=23% Similarity=0.327 Sum_probs=206.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.++|++.+.||+|+||.||+|++. ++..||+|++.... ......+.+|++++.+ ++||||+++++++..++..+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE----CNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH----CCCCCCCeEEEEEEECCEEE
Confidence 367999999999999999999976 68889999987642 2234578899999987 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++|+|.++++....+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 99999999999999998888999999999999999999999862 6999999999999999999999999998765322
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCc--------
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGR-------- 1033 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 1033 (1088)
......|+..|+|||++.+..++.++||||+||++|||++|+.||........................
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence 223456899999999999889999999999999999999999999765432111100000000000000
Q ss_pred --------------------cccchhhcCCCccc-cHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1034 --------------------AVIPVVLLGSGLAE-GAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1034 --------------------~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+..+.......... ......++.+++.+|++.||++||++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000000 11234678999999999999999999999764
No 46
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.9e-36 Score=337.17 Aligned_cols=267 Identities=22% Similarity=0.238 Sum_probs=203.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
++|++.+.||+|+||.||+|+++ +++.||||++..... ...+.+.+|+++++. ++||||+++++++..++..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~ 76 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRT----LKQENIVELKEAFRRRGKLY 76 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHh----CCCccccchhhhEecCCEEE
Confidence 46899999999999999999986 678999999876432 234567889999986 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||++++.+..+.+....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 77 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 77 LVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 9999999987776665566799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHH-HHhhh-c--------cCCCCC
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEW-GRRVM-G--------YGRHGP 1031 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~-~~~~~-~--------~~~~~~ 1031 (1088)
.........|+..|+|||++.+..++.++||||+||++|||++|+.||.+........ ..... . +.....
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 3333344578999999999988889999999999999999999999998754311100 00000 0 000000
Q ss_pred CccccchhhcCCC---ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAVIPVVLLGSG---LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......+...... ..........+.+++.+|++.||++||+++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000 0001113456899999999999999999999875
No 47
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-36 Score=339.34 Aligned_cols=244 Identities=25% Similarity=0.301 Sum_probs=202.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|..+ +++.||+|++..... ...+.+.+|+++++. ++||||+++++++.++...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~----l~hp~iv~~~~~~~~~~~~ 76 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKE----VSHPFIIRLFWTEHDQRFL 76 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHh----CCCCcHhhhHhhhccCCeE
Confidence 36888999999999999999976 689999999875421 234567889999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++|+|.++++..+.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 77 YMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999999999888899999999999999999999999 999999999999999999999999999876542
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
. .....|++.|+|||++.+..++.++||||+||++|||++|+.||.+.... +.........
T Consensus 154 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~------------- 214 (291)
T cd05612 154 R----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--GIYEKILAGK------------- 214 (291)
T ss_pred C----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC-------------
Confidence 2 22346899999999999889999999999999999999999999875431 1112211000
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCC-----HHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPN-----VKEVLA 1078 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~ 1078 (1088)
...+......+.+++.+|++.||.+||+ ++|+++
T Consensus 215 ----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 215 ----LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ----cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 0011122356788999999999999995 777764
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.6e-36 Score=337.06 Aligned_cols=246 Identities=28% Similarity=0.359 Sum_probs=199.2
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
|+..+.||+|+||.||+|.+. +|+.||||++...... ....+.+|++++.. +.|++++++++++.+++..++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~----l~~~~iv~~~~~~~~~~~~~l 77 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEK----VNSRFVVSLAYAYETKDALCL 77 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHh----cCCCcEEEEEEEEccCCeEEE
Confidence 677899999999999999975 7899999998754322 23457789999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 78 v~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 78 VLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred EEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 99999999999887543 3689999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhH--HHHHHhhhccCCCCCCccccch
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECL--VEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.. ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... ........
T Consensus 155 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-------------- 218 (285)
T cd05631 155 GE--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-------------- 218 (285)
T ss_pred CC--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh--------------
Confidence 22 2234568999999999999999999999999999999999999998654311 11111111
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC-----HHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN-----VKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~ 1078 (1088)
......+......+.+++.+|++.||++||+ ++|+++
T Consensus 219 ---~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 219 ---EDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ---cccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 0000112223457788999999999999997 777765
No 49
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-36 Score=349.90 Aligned_cols=258 Identities=28% Similarity=0.408 Sum_probs=203.6
Q ss_pred cCCCCccceecccCceEEEEEEe------CCCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVL------PDGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
.++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|++++..+. +||||+++++++.+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~---~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG---NHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc---CCcceeeeeeeecc
Confidence 34688899999999999999974 235689999997543 233456888999998732 79999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcC--------------------------------------------------------
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRT-------------------------------------------------------- 900 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~-------------------------------------------------------- 900 (1088)
....++||||+++|+|.++++...
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 999999999999999999986421
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 901 -------------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 901 -------------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
.+++..+.+++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 368889999999999999999998 9999999999999999999999999999876433
Q ss_pred CCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 962 DSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 962 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
... ......++..|+|||.+.+..++.++|||||||++|||++ |..||....... .+...... ..
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~-~~----------- 334 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKE-GY----------- 334 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHh-Cc-----------
Confidence 221 1222345678999999998899999999999999999998 888887643211 11111110 00
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
....+...+.++.+++.+|++.||++||+++||++.|++.+
T Consensus 335 ----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~~ 375 (375)
T cd05104 335 ----RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQL 375 (375)
T ss_pred ----cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhhC
Confidence 00001122357889999999999999999999999999753
No 50
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=309.95 Aligned_cols=265 Identities=25% Similarity=0.293 Sum_probs=207.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--Ce
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--SE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~~ 879 (1088)
++|+..+.|++|+||.||+|+++ +++.||+|+++.+... -.-...+|+.++.+ .+|||||.+-.+.... +.
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~----~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLK----ARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHh----cCCCCeeeeEEEEeccccce
Confidence 45788899999999999999986 6788999999876321 12356789999987 5799999999988754 57
Q ss_pred EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.|+|||||+. +|...++... ++...++..++.|+++|++|||.. .|+|||||++|+|++..|.+||+|||+|+.+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 9999999987 9999998765 799999999999999999999999 8999999999999999999999999999998
Q ss_pred cCCCCcccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCC--CCCCcc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYG-QTWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGR--HGPGRA 1034 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~--~~~~~~ 1034 (1088)
... ....+..+-|.+|+|||.+ ....|+.+.|+||+|||+.||+++++.|.+..+ +...-....+.++. .+++..
T Consensus 228 gsp-~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 228 GSP-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred cCC-cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 754 3345566789999999964 456899999999999999999999999998765 22333333333332 222232
Q ss_pred ccchhhcCCCccccHH----------HHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAE----------EMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~----------~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+..........+.. ....-++++..++..||.+|.||.|.++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 2222211111111111 2245678888999999999999999875
No 51
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3e-36 Score=329.53 Aligned_cols=250 Identities=29% Similarity=0.436 Sum_probs=203.4
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
++|++.+.||+|+||.||+|.++++..+|+|.+.... ....++.+|++++++ ++||||+++++++.++...++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMK----LSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHH----CCCCCceeEEEEEccCCCEEEEE
Confidence 3577889999999999999998888899999987543 335678899999987 67999999999999999999999
Q ss_pred EecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 885 EYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||+++|+|.++++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999999753 4689999999999999999999999 999999999999999999999999999876543222
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.......++..|+|||.+....++.++||||||+++|||++ |+.||...... +..........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~i~~~~~-------------- 219 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEMISRGFR-------------- 219 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCC--------------
Confidence 22223345668999999988889999999999999999999 89999765431 11111110000
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
...+.....++.+++.+|++++|++||+++|+++.|
T Consensus 220 --~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 220 --LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 001112235688999999999999999999999886
No 52
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.3e-36 Score=336.44 Aligned_cols=259 Identities=25% Similarity=0.409 Sum_probs=202.2
Q ss_pred CCCCccceecccCceEEEEEEeCC-----------------CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCc
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD-----------------GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPN 866 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~n 866 (1088)
++|++.+.||+|+||.||+|.+++ +..||+|++..... ....++.+|++++.+ ++|||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~n 80 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSR----LKDPN 80 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhh----cCCCC
Confidence 578889999999999999998532 33699999876532 234578899999986 67999
Q ss_pred eeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcC-------------------CCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 001384 867 LVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRT-------------------RLTWRRRLDIAIDVARALVFLHHECYP 927 (1088)
Q Consensus 867 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-------------------~l~~~~~~~i~~qi~~~L~yLH~~~~~ 927 (1088)
|+++++++.+.+..++||||+++|+|.+++.... .+++.++++++.||+.||+|||+.
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--- 157 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL--- 157 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---
Confidence 9999999999999999999999999999986431 367889999999999999999999
Q ss_pred CeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh--
Q 001384 928 PIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-- 1004 (1088)
Q Consensus 928 ~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-- 1004 (1088)
+|+||||||+||+++.++.+||+|||+++.+...+.. ......++..|+|||++....++.++||||||+++|||++
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999876443321 1223445788999999888899999999999999999986
Q ss_pred CCcCCCCCch-hHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1005 GRRALEGGEE-CLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1005 g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
+..||..... ........... ... .... ...+..++..+.+++.+|++.||++||++.||.+.|++
T Consensus 238 ~~~p~~~~~~~~~~~~~~~~~~--~~~--~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 238 KEQPYGELTDEQVIENAGEFFR--DQG--RQVY--------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCCcCCHHHHHHHHHHHhh--hcc--cccc--------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 5677765433 22222221110 000 0000 00122344678899999999999999999999998864
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.1e-36 Score=342.17 Aligned_cols=241 Identities=26% Similarity=0.313 Sum_probs=197.6
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|+.+ +|+.||+|++.+... .....+..|++++++ ++||||+++++++...+..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----l~hp~i~~~~~~~~~~~~~~lv~e~ 76 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN----TRHPFLTALKYSFQTHDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh----CCCCCCCCEEEEEEcCCEEEEEEeC
Confidence 46999999999999975 689999999986432 222457788999886 6799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.....+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~ 152 (323)
T cd05571 77 ANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATM 152 (323)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcc
Confidence 99999999999888899999999999999999999999 9999999999999999999999999998753221 1223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....... .. ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~~~~~-~~----------------~~ 213 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELILM-EE----------------IR 213 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH--HHHHHHc-CC----------------CC
Confidence 34579999999999999899999999999999999999999997654311 1111110 00 00
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
.+.....++.+++.+|++.||++|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1222345678899999999999999 7888864
No 54
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=343.29 Aligned_cols=243 Identities=24% Similarity=0.309 Sum_probs=201.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|+++ +++.||+|++..... ...+.+.+|+.++.+ ++||||+++++++.+++..
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~----l~hp~iv~~~~~~~~~~~~ 93 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILME----LSHPFIVNMMCSFQDENRV 93 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh----CCCCCCCcEEEEEEcCCEE
Confidence 46888999999999999999976 688999999975422 233567889999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++|+|.+++.....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999999999888899999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... +........ ..
T Consensus 171 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~~------~~------ 232 (329)
T PTZ00263 171 R----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--RIYEKILAG------RL------ 232 (329)
T ss_pred C----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--HHHHHHhcC------Cc------
Confidence 2 22357899999999999989999999999999999999999999865431 111111100 00
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCC-----HHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPN-----VKEVL 1077 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil 1077 (1088)
..+.....++.+++.+|++.||.+||+ ++|++
T Consensus 233 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 233 -----KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 001112346778999999999999997 56665
No 55
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.3e-36 Score=347.91 Aligned_cols=257 Identities=27% Similarity=0.388 Sum_probs=203.1
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
++|++.+.||+|+||.||+|++. ++..||||++...... ....+.+|+++++.+. +||||+++++++...
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~---~h~nIv~~~~~~~~~ 114 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG---QHKNIVNLLGACTHG 114 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc---cCCceeeEeeEecCC
Confidence 46889999999999999999842 2357999999765322 3356888999998632 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhc----------------------------------------------------------
Q 001384 878 SEKILVYEYMEGGSLEDIISDR---------------------------------------------------------- 899 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~---------------------------------------------------------- 899 (1088)
...++||||+++|+|.++++..
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999998542
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc-cc
Q 001384 900 ------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH-VS 966 (1088)
Q Consensus 900 ------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~ 966 (1088)
.++++.++++++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 2478889999999999999999998 9999999999999999999999999999765432211 12
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
....++..|+|||++....++.++|||||||++|||++ |+.||........ +..... ... ..
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~~~-~~~---------------~~ 334 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKMVK-RGY---------------QM 334 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHHHH-ccc---------------Cc
Confidence 22345678999999988899999999999999999997 9999976432111 111111 000 00
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+...+.++.+++.+|++.||.+||++.||++.|++++
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 001112357888999999999999999999999999986
No 56
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=319.46 Aligned_cols=249 Identities=27% Similarity=0.359 Sum_probs=201.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccch---HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE---REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.|++.+.||.|.-|+||+++++ .+..+|+|++.+.....+ .+.+.|-+||+. ++||.+..+|+.++.++..|
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~----lDHPFlPTLYa~fet~~~~c 153 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSL----LDHPFLPTLYASFETDKYSC 153 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHh----cCCCccchhhheeeccceeE
Confidence 4677899999999999999987 458999999998765433 356678888886 78999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
+|||||+||+|....+++ +.+++..++.++.+|+.||+|||.+ |||+|||||+||||.++|++-++||+++....
T Consensus 154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 999999999999998764 4699999999999999999999999 99999999999999999999999999863221
Q ss_pred C---------------------------------CCC----------------------cccccccccccccCccccCCC
Q 001384 960 A---------------------------------GDS----------------------HVSTTIAGTVGYVAPEYGQTW 984 (1088)
Q Consensus 960 ~---------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~ 984 (1088)
. ... .....++||-+|.|||++.+.
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~ 310 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE 310 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence 0 000 112246799999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcc
Q 001384 985 QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTA 1064 (1088)
Q Consensus 985 ~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 1064 (1088)
..+.++|+|+|||++|||+.|..||.+.+... .. ..+. ... ...+..+.....+.+||++.+.
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl-~NIv------------~~~---l~Fp~~~~vs~~akDLIr~LLv 373 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TL-RNIV------------GQP---LKFPEEPEVSSAAKDLIRKLLV 373 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-hH-HHHh------------cCC---CcCCCCCcchhHHHHHHHHHhc
Confidence 99999999999999999999999999864311 11 1111 000 0111122445678899999999
Q ss_pred cCCCCCCC----HHHHHH
Q 001384 1065 EAPNARPN----VKEVLA 1078 (1088)
Q Consensus 1065 ~dP~~RPs----~~eil~ 1078 (1088)
+||.+|.. |.||.+
T Consensus 374 KdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 374 KDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred cChhhhhccccchHHhhc
Confidence 99999998 777753
No 57
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.5e-36 Score=342.25 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=205.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|++. +++.||||++.+... .....+..|++++.. ++||||+++++++.++...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~----~~h~~iv~~~~~~~~~~~~ 76 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT----TKSEWLVKLLYAFQDDEYL 76 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHh----CCCCCCccEEEEEEcCCEE
Confidence 46899999999999999999976 588999999976422 233567889999886 5799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+||||+++|+|.++++....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 77 YLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999999999888899999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
......||+.|+|||++.+..++.++||||+||++|||++|+.||........ + .....+..... .+..
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~-~~i~~~~~~~~-----~~~~ 222 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-W-ENLKYWKETLQ-----RPVY 222 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-H-HHHHhcccccc-----CCCC
Confidence 23345789999999999988999999999999999999999999986543111 1 11110000000 0000
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.........++.+++.+|++.+|.+||+++|+++.
T Consensus 223 ----~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 223 ----DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ----CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00001234578889999999999999999999853
No 58
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.8e-36 Score=327.78 Aligned_cols=254 Identities=29% Similarity=0.415 Sum_probs=207.2
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.++|++.+.||+|++|.||+|.+.+++.||+|.++... ...+++.+|++++++ ++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKK----LRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHH----CCCCCccceeEEEecCCCeeee
Confidence 35688899999999999999998778899999987653 335678899999987 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++++|.+++.... .+++.++..++.|++.|+.|||+. +++||||||+||++++++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999999999997654 689999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
..........+..|+|||+..+..++.++||||||+++|||++ |+.||.+..... .+ .......
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~-~~~~~~~------------- 221 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-VL-QQVDQGY------------- 221 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HH-HHHHcCC-------------
Confidence 2211122223468999999988899999999999999999999 999997654311 11 1111000
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
..+.+...+..+.+++.+|++.+|++||+++++++.|+++
T Consensus 222 ---~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 222 ---RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0011222346788899999999999999999999999863
No 59
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=305.11 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=204.1
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
.+++|++.+.||+|.|+.||++... +|+.+|+|++.... ....+++.+|+.+.+. ++|||||++.+.+.+...
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~----LqHP~IvrL~~ti~~~~~ 84 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK----LQHPNIVRLHDSIQEESF 84 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHh----cCCCcEeehhhhhcccce
Confidence 3567888899999999999999865 78999999886543 2345678899999886 789999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC---CCCEEEeecccce
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK---EGKALVTDFGLAR 956 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~---~~~~kl~Dfg~a~ 956 (1088)
.|+|+|+|+|++|..-+-.+.-.++..+-.++.||++++.|.|.+ +|||||+||+|+++.+ ...+|++|||+|.
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred eEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEE
Confidence 999999999999976555556688999999999999999999999 9999999999999963 3469999999999
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhh--ccCCCCCCcc
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVM--GYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~ 1034 (1088)
.+. +......++||++|||||++...+|+..+|||+.||++|-++.|..||.+.+... ...+++ .|....+.
T Consensus 162 ~l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--lye~I~~g~yd~~~~~-- 235 (355)
T KOG0033|consen 162 EVN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYEQIKAGAYDYPSPE-- 235 (355)
T ss_pred EeC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--HHHHHhccccCCCCcc--
Confidence 887 3444566789999999999999999999999999999999999999998744311 112222 11111111
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+....+..+++++|+..||.+|.|+.|.++
T Consensus 236 -------------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 236 -------------WDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -------------cCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1222345677888999999999999999874
No 60
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.8e-36 Score=328.96 Aligned_cols=252 Identities=26% Similarity=0.403 Sum_probs=206.6
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
++|++.+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++ ++|+||+++++++.+....++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKT----LQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHh----CCCCCeeeEEEEEcCCCCcEEEE
Confidence 4688899999999999999998888899999987543 235678899999986 67999999999999999999999
Q ss_pred EecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 885 EYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||+++|+|.++++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 999999999999653 4689999999999999999999998 99999999999999999999999999998764332
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchh-HHHHHHhhhccCCCCCCccccchhh
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEEC-LVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
........++..|+|||+.....++.++||||||+++|+|++ |+.||...... ...+..... .
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~--~------------- 222 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY--R------------- 222 (261)
T ss_pred eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC--C-------------
Confidence 222223345678999999988889999999999999999998 99999765432 111111100 0
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
.+.....+.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 223 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 ----MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 001112335688899999999999999999999999863
No 61
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-37 Score=322.33 Aligned_cols=258 Identities=28% Similarity=0.380 Sum_probs=196.9
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC-----e
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS-----E 879 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~-----~ 879 (1088)
.|+..+++|+|+||.||+|+.. +++.||||++..+.... -.|+++|+. ++|||||++..+|.... .
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~----l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRK----LDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHh----cCCcCeeeEEEEEEecCCCchhH
Confidence 4666799999999999999976 57899999998763322 357788875 68999999999887532 2
Q ss_pred EEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC-CCEEEeeccc
Q 001384 880 KILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE-GKALVTDFGL 954 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~-~~~kl~Dfg~ 954 (1088)
..+|||||+. +|++.++. +.+++.-.++-++.||.+||+|||+. +|+||||||+|+|+|.+ |.+||+|||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 3589999987 99999874 56789999999999999999999998 99999999999999966 9999999999
Q ss_pred ceeecCCCCcccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch--hHHHHHHhhhccCCCCC
Q 001384 955 ARVVSAGDSHVSTTIAGTVGYVAPEYG-QTWQATTKGDVYSFGVLAMELATGRRALEGGEE--CLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 955 a~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~ 1031 (1088)
|+....++.. ..+..|..|+|||.+ ....|+.+.||||.|||+.||+-|++.|.+... .+.+..+. ++.+....
T Consensus 173 AK~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~-lG~Pt~e~ 249 (364)
T KOG0658|consen 173 AKVLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKV-LGTPTRED 249 (364)
T ss_pred ceeeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHH-hCCCCHHH
Confidence 9998765543 456678899999954 556899999999999999999999999998643 23333222 11111111
Q ss_pred Ccc--------ccchhhcCCC-ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRA--------VIPVVLLGSG-LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~--------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... ..+....... .........+.++++.++++.+|.+|.++.|++.
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 110 1111111110 0123345568899999999999999999999874
No 62
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=314.72 Aligned_cols=265 Identities=23% Similarity=0.306 Sum_probs=203.2
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEcccc--CccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec---
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQRE--GLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD--- 876 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~--- 876 (1088)
...+|...+.||+|+||.|+.|.++ +|+.||||++... .....++..+|+++++. ++|+||+.+++.+..
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~----~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRH----LRHENIIGLLDIFRPPSR 95 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHH----hcCCCcceEEeecccccc
Confidence 3456776799999999999999976 7899999999843 33344677899999997 789999999998875
Q ss_pred --CCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccc
Q 001384 877 --GSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGL 954 (1088)
Q Consensus 877 --~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~ 954 (1088)
-...|+|+|+|+. +|...++.+..++...+..+++|+++|+.|+|+. +|+|||+||+|++++.+..+||+|||+
T Consensus 96 ~~f~DvYiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 96 DKFNDVYLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred cccceeEEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 3568999999954 9999999988899999999999999999999999 999999999999999999999999999
Q ss_pred ceeecCCC-CcccccccccccccCccc-cCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC
Q 001384 955 ARVVSAGD-SHVSTTIAGTVGYVAPEY-GQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 955 a~~~~~~~-~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1088)
|+...... ....+.++-|..|.|||+ +....|+.+.||||.|||+.||++|++.|.+.+. ..+. ..++..-. .+.
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~-v~Ql-~lI~~~lG-tP~ 248 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY-VHQL-QLILELLG-TPS 248 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch-HHHH-HHHHHhcC-CCC
Confidence 99875431 222466788999999996 4556899999999999999999999999988643 1000 00000000 000
Q ss_pred ccccchh--------hc--CC--Ccc---ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1033 RAVIPVV--------LL--GS--GLA---EGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1033 ~~~~~~~--------~~--~~--~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+.+..+ +. +. ..+ ..+......++++.+|+.-||.+|+|++|+++
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000 00 00 000 01123346788999999999999999999875
No 63
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.7e-36 Score=341.96 Aligned_cols=250 Identities=27% Similarity=0.341 Sum_probs=200.5
Q ss_pred CCCccceecccCceEEEEEEeC----CCcEEEEEEccccCc----cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP----DGREVAVKKLQREGL----EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
+|++.+.||+|+||.||+|+.. +++.||+|++.+... ...+.+..|+.++..+. +||||+++++++..+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~~i~~~~~~~~~~ 77 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR---QSPFLVTLHYAFQTE 77 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc---CCCCcccEEEEEecC
Confidence 4788999999999999999853 578999999975421 22345778888888643 699999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 878 SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
+..++||||+++|+|.+++.....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 78 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 78 AKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999999998888899999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCch--hHHHHHHhhhccCCCCCCcc
Q 001384 958 VSAGDSHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEE--CLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
+............||..|+|||++.+. .++.++|||||||++|||++|+.||..... .............
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~------- 227 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD------- 227 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC-------
Confidence 644333333456799999999988764 478899999999999999999999975322 1122222222100
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
...+......+.+++.+|++.||++|| +++++++
T Consensus 228 ----------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 228 ----------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 011122345678889999999999999 6667764
No 64
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.5e-36 Score=327.37 Aligned_cols=253 Identities=26% Similarity=0.382 Sum_probs=205.8
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
+|++.+.||+|+||.||+|.++ .++.||+|++.... ....++.+|++++++ ++||||+++++++..+...++||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKE----IKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHh----CCCCChhheEEEEcCCCCcEEEE
Confidence 4777899999999999999975 58899999987542 334578899999986 67999999999999999999999
Q ss_pred EecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 885 EYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||+++++|.+++... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 999999999999754 3589999999999999999999998 99999999999999999999999999998765432
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
........++..|+|||...+..++.++||||||+++|||++ |..||.+... .+..........
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~------------- 223 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKGYR------------- 223 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCC-------------
Confidence 222222334668999999988899999999999999999998 8999876432 222222211000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
...+...+..+.+++.+|++.||++||++.|+++.|+.++
T Consensus 224 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 224 ---MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 0112223467888999999999999999999999999874
No 65
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-35 Score=342.83 Aligned_cols=259 Identities=29% Similarity=0.413 Sum_probs=206.5
Q ss_pred cCCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
.++|++.+.||+|+||.||+|++. .+..||||++...... ..+.+.+|++++.++. .||||+++++++.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~---~HpnIv~l~~~~~~ 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG---PHLNIVNLLGACTK 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC---CCCCeeeEEEEEcc
Confidence 568889999999999999999853 1347999999754322 3457889999998732 49999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHhhc---------------------------------------------------------
Q 001384 877 GSEKILVYEYMEGGSLEDIISDR--------------------------------------------------------- 899 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------- 899 (1088)
....|+||||+++|+|.++++..
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 99999999999999999988642
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 001384 900 ---------------------------------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVL 940 (1088)
Q Consensus 900 ---------------------------------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIl 940 (1088)
..+++.++..++.|++.|++|||+. +|+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 1377888899999999999999998 9999999999999
Q ss_pred EcCCCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHH
Q 001384 941 LDKEGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVE 1018 (1088)
Q Consensus 941 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~ 1018 (1088)
++.++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.||.........
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~ 349 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF 349 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH
Confidence 999999999999999876432221 1223456788999999988899999999999999999997 99998764321111
Q ss_pred HHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1019 WGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
+.. ... +.....+...+..+.+++.+|++.||++||++.+|.++|+++++
T Consensus 350 ~~~-~~~----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 350 YNK-IKS----------------GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHH-Hhc----------------CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111 110 00011122345678899999999999999999999999999876
No 66
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.9e-36 Score=340.42 Aligned_cols=244 Identities=25% Similarity=0.334 Sum_probs=200.6
Q ss_pred CCCCccceecccCceEEEEEEeCC--CcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD--GREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
++|++.+.||+|+||.||+|.++. +..||+|++..... .....+.+|++++.. ++||||+++++++.++..
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~----l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNY----INHPFCVNLYGSFKDESY 105 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh----CCCCCCcceEEEEEeCCE
Confidence 468889999999999999998643 36899999875422 223467789999986 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.++||||+++|+|.+++.....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999999999888899999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... ....... ....
T Consensus 183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~--~~~i~~~------~~~~--- 247 (340)
T PTZ00426 183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI--YQKILEG------IIYF--- 247 (340)
T ss_pred CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH--HHHHhcC------CCCC---
Confidence 22 2345789999999999888899999999999999999999999987544211 1111100 0000
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
+......+.+++.+|++.||++|+ +++|+++
T Consensus 248 --------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 248 --------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred --------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 112234577889999999999995 7887764
No 67
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.9e-36 Score=336.89 Aligned_cols=241 Identities=27% Similarity=0.319 Sum_probs=196.4
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|+.+ +|+.||+|++..... .....+..|+++++. ++||||+++++++...+..|+||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~----l~hp~i~~~~~~~~~~~~~~lv~E~ 76 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN----TRHPFLTALKYAFQTHDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh----CCCCCCcceeeEEecCCEEEEEEeC
Confidence 46999999999999975 689999999976432 223456778888886 6799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~ 152 (323)
T cd05595 77 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATM 152 (323)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCC-CCcc
Confidence 99999999998888899999999999999999999999 9999999999999999999999999998753221 1222
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ......... .
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~--~~~~~~~~~-----------------~ 213 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FELILMEEI-----------------R 213 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHhcCCC-----------------C
Confidence 345789999999999988999999999999999999999999976543211 111110000 0
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
.+.....++.+++.+|++.||++|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1122345678899999999999998 7888764
No 68
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=348.84 Aligned_cols=256 Identities=26% Similarity=0.378 Sum_probs=208.4
Q ss_pred CCCCccceecccCceEEEEEEeCCC-cEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeE-Eec------
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDG-REVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGW-CLD------ 876 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~-~~~------ 876 (1088)
.++++.++|.+|||+.||.|.+..+ .+||+|++.......-+.+++|+++|+.+. .|+|||.+++. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~---gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS---GHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc---CCCceeeEeccccccccCCCc
Confidence 4567789999999999999998765 999999998876666778999999999864 69999999993 221
Q ss_pred CCeEEEEEEecCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccc
Q 001384 877 GSEKILVYEYMEGGSLEDIISD--RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGL 954 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~ 954 (1088)
..++++.||||.||.|-|++.. ..++++.++++|++|+++|+++||.. .|+|||||||-+||||+.++..||||||.
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 2467899999999999999974 34699999999999999999999997 56899999999999999999999999999
Q ss_pred ceeecCCC-Ccc-------cccccccccccCccc---cCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhh
Q 001384 955 ARVVSAGD-SHV-------STTIAGTVGYVAPEY---GQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRV 1023 (1088)
Q Consensus 955 a~~~~~~~-~~~-------~~~~~gt~~y~aPE~---~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~ 1023 (1088)
|.-..... ... .-....|+.|+|||+ ..+...++|+|||||||+||-++....||++.....+
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI------ 266 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI------ 266 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE------
Confidence 86432211 111 112357899999996 5577899999999999999999999999997533111
Q ss_pred hccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1024 MGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
+... ...+..+.....+.+||..||+++|++||++.+|+..+.++..
T Consensus 267 ------------lng~---Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 267 ------------LNGN---YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ------------Eecc---ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 1100 0112235778899999999999999999999999999988753
No 69
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-35 Score=335.17 Aligned_cols=266 Identities=23% Similarity=0.354 Sum_probs=204.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.++|++.+.||+|+||.||+|.+. ++..+|+|++.... ......+.+|++++.. ++||||+++++++.+++..+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE----CNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH----CCCCcccceeEEEEECCEEE
Confidence 368999999999999999999976 68889999887542 2234568899999987 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++|+|.++++....+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 99999999999999988888999999999999999999999852 7999999999999999999999999998755321
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCc--------
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGR-------- 1033 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 1033 (1088)
......++..|+|||++.+..++.++||||+||++|||++|+.||........................
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 223356889999999998888999999999999999999999999865432222111100000000000
Q ss_pred ------------------cccchhhcCCCccc-cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 ------------------AVIPVVLLGSGLAE-GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ------------------~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...+.......... ......++.+++.+||+.||++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 00000000000000 0112356889999999999999999999964
No 70
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-35 Score=352.84 Aligned_cols=248 Identities=23% Similarity=0.297 Sum_probs=202.5
Q ss_pred CCCccceecccCceEEEEEEeC-C-CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-D-GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+..|+++++. ++||||+++++++..++..|+|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~----l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAA----CDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHh----CCCCCEeEEEEEEEECCEEEEE
Confidence 4888999999999999999865 3 67888888765544444567889999986 6899999999999999999999
Q ss_pred EEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 884 YEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
|||+++|+|.++++. ..++++.++..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 999999999988754 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 960 AGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 960 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... +.......
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--~~~~~~~~------------- 285 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR--EIMQQVLY------------- 285 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-------------
Confidence 4322 1234467999999999999889999999999999999999999999865431 11111110
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+...+.+.....++.+++.+|++.||++||++++++.
T Consensus 286 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 286 ---GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0000112223457888999999999999999999864
No 71
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=9.6e-36 Score=331.52 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=207.7
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
.+|.+.+.||+|+||+||++... ++..+|+|.+..........+.+|++++.+ ++||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN----LQHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHh----CCCCCcceEEEEEecCC
Confidence 46888899999999999999842 345689999987644455678999999986 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcC-------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC
Q 001384 879 EKILVYEYMEGGSLEDIISDRT-------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG 945 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~-------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~ 945 (1088)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 9999999999999999997543 389999999999999999999998 999999999999999999
Q ss_pred CEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhh
Q 001384 946 KALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRV 1023 (1088)
Q Consensus 946 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1088)
.+|++|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||....... .....
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i 235 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECI 235 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence 9999999999765432211 1223345778999999988899999999999999999998 899987654311 11111
Q ss_pred hccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCCC
Q 001384 1024 MGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPHC 1087 (1088)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 1087 (1088)
.... ....+...+.++.+++.+|++.||.+||++.|+.+.|+++.+..
T Consensus 236 ~~~~----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 236 TQGR----------------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HcCC----------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 1000 00011123356889999999999999999999999999987643
No 72
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-36 Score=300.97 Aligned_cols=254 Identities=26% Similarity=0.332 Sum_probs=208.5
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--------chHHHHHHHHHHhCCCCCCCCCceeEEee
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--------GEREFRAEMEVLSGNGFGWPHPNLVTLYG 872 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~~~~~l~h~niv~l~~ 872 (1088)
....+|.-.+.+|+|..++|-++..+ +|.++|+|++...... -.+...+|+.+++++. .||+|+.+.+
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~---GHP~II~l~D 90 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM---GHPYIIDLQD 90 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc---CCCcEEEeee
Confidence 44567888899999999999999876 6889999988643211 1245678999999864 8999999999
Q ss_pred EEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeec
Q 001384 873 WCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDF 952 (1088)
Q Consensus 873 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Df 952 (1088)
+|+.+...++|+|.|+.|.|.|++...-.+++++.++|++|+..|++|||.. +||||||||+|||++++..+||+||
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 9999999999999999999999999988999999999999999999999999 9999999999999999999999999
Q ss_pred ccceeecCCCCcccccccccccccCccccCC------CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhcc
Q 001384 953 GLARVVSAGDSHVSTTIAGTVGYVAPEYGQT------WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 953 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
|+|+...+++ .....+||++|.|||.+.. ..|+..+|+||+||++|-++.|.+||-......+--......|
T Consensus 168 GFa~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky 245 (411)
T KOG0599|consen 168 GFACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY 245 (411)
T ss_pred ceeeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc
Confidence 9999887543 4567899999999997653 3678899999999999999999999976444322211111111
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... .+...+......++|.+|++.||.+|.|++|+++
T Consensus 246 qF~---------------speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 246 QFR---------------SPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred ccC---------------CcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 111 1122344456788999999999999999999875
No 73
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.3e-35 Score=329.87 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=205.4
Q ss_pred CCCccceecccCceEEEEEEeCC------CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPD------GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
+|++.+.||+|+||.||+|.... ...||+|.+..... .....+.+|++++.+ ++||||+++++++....
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~----l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSD----LQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHh----cCCcccceEEEEEcCCC
Confidence 57888999999999999998642 25799999875432 234568899999986 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc
Q 001384 879 EKILVYEYMEGGSLEDIISDR----------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD 942 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~ 942 (1088)
..+++|||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +++||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVG 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEc
Confidence 999999999999999999764 4578899999999999999999999 999999999999999
Q ss_pred CCCCEEEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHH
Q 001384 943 KEGKALVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWG 1020 (1088)
Q Consensus 943 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~ 1020 (1088)
+++.++|+|||+++.....+. .......++..|+|||.+....++.++|||||||++|||++ |..||.+.... +..
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~ 236 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVI 236 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHH
Confidence 999999999999986543332 12233456788999999888899999999999999999998 99999865431 111
Q ss_pred HhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1021 RRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
..... +.....+...+.++.+++.+|++.||.+||+++||++.|+++
T Consensus 237 ~~i~~----------------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 237 EMIRS----------------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHc----------------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11110 001111334557899999999999999999999999999863
No 74
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.3e-36 Score=328.07 Aligned_cols=254 Identities=30% Similarity=0.472 Sum_probs=209.7
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
..+|++.+.||+|+||.||+|.+.+++.+|+|.+.........++..|+.+++. ++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKR----LRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhc----CCCcchhheeeeEecCCCeEEE
Confidence 346888999999999999999988899999999987755456778899999886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++++|.++++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 9999999999999753 3589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
.. ......++..|+|||......++.++||||||+++|+|++ |+.||...... +.......
T Consensus 158 ~~-~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~--------------- 219 (261)
T cd05148 158 VY-LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITA--------------- 219 (261)
T ss_pred cc-cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHh---------------
Confidence 21 1223345678999999888899999999999999999998 89999765421 11111110
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
+...+.+...+..+.+++.+|++.||++||+++++++.|+.+
T Consensus 220 -~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 220 -GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000111233446788999999999999999999999999864
No 75
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.2e-36 Score=336.18 Aligned_cols=238 Identities=26% Similarity=0.304 Sum_probs=194.8
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|+||.||+|++. +++.||+|++.+.. ......+..|++++.+ ++||||+++++++.+++..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQ----VNCPFIVPLKFSFQSPEKLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh----CCCCcEeceeeEEecCCeEEEEEcCCC
Confidence 699999999999976 57899999987542 1223467789999886 679999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccc
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
+|+|.+++....++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 77 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 152 (312)
T cd05585 77 GGELFHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT 152 (312)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence 999999998888899999999999999999999999 99999999999999999999999999987543222 22344
Q ss_pred ccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcccc
Q 001384 969 IAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEG 1048 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1088)
..||+.|+|||++.+..++.++||||+||++|||++|+.||.+... .+......... ...+
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--~~~~~~~~~~~-----------------~~~~ 213 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--NEMYRKILQEP-----------------LRFP 213 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--HHHHHHHHcCC-----------------CCCC
Confidence 6789999999999998999999999999999999999999986533 22222222100 0112
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCC---HHHHH
Q 001384 1049 AEEMSELLRIGVRCTAEAPNARPN---VKEVL 1077 (1088)
Q Consensus 1049 ~~~~~~l~~li~~cl~~dP~~RPs---~~eil 1077 (1088)
......+.+++.+|++.||++||+ +.|++
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 223456788999999999999985 45554
No 76
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.9e-36 Score=329.88 Aligned_cols=247 Identities=35% Similarity=0.575 Sum_probs=194.1
Q ss_pred ccceecccCceEEEEEEeC-----CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 809 EDRIIGKGGFGTVYRGVLP-----DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+.+.||+|+||.||+|.++ .+..|+||+++..... ..+++.+|++.+.+ ++||||++++|++...+..++
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~----l~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRK----LRHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHT----HSBTTBE-EEEEEESSSSEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccc----ccccccccccccccccccccc
Confidence 4578999999999999976 2568999999654322 35789999999986 689999999999998888999
Q ss_pred EEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||||+++|+|.++++.. ..+++.++..|+.||+.||+|||+. +++|+||+++||++++++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999999999886 6799999999999999999999999 999999999999999999999999999987632
Q ss_pred CCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 961 GDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 961 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.... ..........|+|||.+....++.++||||||+++|||++ |+.||..... .++.......
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~~~~~~~~~------------ 221 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EEIIEKLKQG------------ 221 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HHHHHHHHTT------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccc------------
Confidence 2221 2233456789999999988889999999999999999999 7789876533 1221211100
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
.....+...+..+.+++.+||+.||++||++.||++.|
T Consensus 222 ----~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 222 ----QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00111223456788999999999999999999999876
No 77
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.1e-35 Score=324.94 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=206.0
Q ss_pred CCCCccceecccCceEEEEEEeCC----CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD----GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
++|++.+.||+|+||+||+|.++. ...||||++...... ...++.+|+.++.+ ++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~ 79 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQ----FDHPNIIRLEGVVTKSRP 79 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHh----CCCCCcceEeEEEecCCc
Confidence 468889999999999999999742 457999998765322 34578889999886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.++||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||++++++.++++|||+++..
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 99999999999999999764 4689999999999999999999998 9999999999999999999999999999877
Q ss_pred cCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 959 SAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 959 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
...... ......++..|+|||...+..++.++||||||+++|+|++ |..||...... +.........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~--------- 225 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGY--------- 225 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC---------
Confidence 522221 1222345678999999988899999999999999999998 99998654321 1111111000
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+.+...+..+.+++.+|++.+|++||++.||++.|++++
T Consensus 226 -------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 226 -------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 00112233457889999999999999999999999999874
No 78
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.7e-35 Score=327.74 Aligned_cols=265 Identities=21% Similarity=0.286 Sum_probs=199.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|++++++ ++||||+++++++..+...++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKN----LKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHh----CCCCCEeeEEEEEcCCCeEEE
Confidence 56899999999999999999976 688999999875432 234567789999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++ +|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 9999975 9999887644 478999999999999999999999 9999999999999999999999999999765322
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCCC------CCc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRHG------PGR 1033 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~------~~~ 1033 (1088)
.. ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+.... ............... ...
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 157 TK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred Cc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 21 2233467899999998754 57899999999999999999999999865431 111111111000000 000
Q ss_pred cccchhhcCC----CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGS----GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+......... ..........+..+++.+|++.||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000 00001122356789999999999999999999974
No 79
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.7e-35 Score=323.07 Aligned_cols=253 Identities=28% Similarity=0.420 Sum_probs=205.2
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
++|++.+.||+|+||.||+|++.++..||+|++..... ..+.+.+|++++++ ++||||+++++++. +...++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~----l~~~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKK----LRHEKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHh----CCCCCcceEEEEEC-CCCcEEEE
Confidence 56899999999999999999987777899999986432 34678899999987 67999999999875 45578999
Q ss_pred EecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 885 EYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||+++|+|.+++++. ..+++..+..++.|++.||+|+|+. +++||||||+||++++++.++|+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999999753 3589999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
........++..|+|||+..+..++.++||||||+++|||++ |..||.+...... ......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~--~~~~~~---------------- 218 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQVER---------------- 218 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH--HHHHhc----------------
Confidence 322223446678999999988899999999999999999999 8888876533111 111110
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..........+..+.+++.+|+++||++||++.++++.|++.+
T Consensus 219 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 219 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 0001112334567889999999999999999999999999865
No 80
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.5e-35 Score=323.79 Aligned_cols=250 Identities=28% Similarity=0.410 Sum_probs=202.9
Q ss_pred CCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
+|++.+.||+|+||+||+|..+++..+|+|.+.... ....++.+|+.++.+ ++||||+++++++.+....++|||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMK----LSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhc----CCCCCeeeEEEEEccCCCcEEEEE
Confidence 577889999999999999998777789999987543 335678999999986 679999999999999889999999
Q ss_pred ecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 886 YMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
|+++|+|.+++... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++........
T Consensus 80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 99999999999764 4689999999999999999999999 9999999999999999999999999998866433222
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 965 VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
......++..|+|||...+..++.++||||||+++|+|++ |..||....... ..........
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~~~--------------- 219 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKVSQGLR--------------- 219 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHhcCCC---------------
Confidence 2222345678999999988889999999999999999998 999997654311 1111110000
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
...+......+.+++.+|++.+|.+||++.++++.++
T Consensus 220 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 -LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0001122467888999999999999999999998764
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.3e-35 Score=336.25 Aligned_cols=241 Identities=26% Similarity=0.326 Sum_probs=197.2
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|+.+ +++.||+|++.+... .....+.+|+++++. ++||||+++++++..++..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~----l~hp~iv~~~~~~~~~~~~~lv~Ey 76 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN----TRHPFLTSLKYSFQTKDRLCFVMEY 76 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh----CCCCCCcceEEEEEcCCEEEEEEeC
Confidence 46999999999999975 689999999976432 223467788888886 6899999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 77 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~ 152 (328)
T cd05593 77 VNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATM 152 (328)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc-cccc
Confidence 99999999998888899999999999999999999999 9999999999999999999999999998753221 1223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... +........ . ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--~~~~~~~~~------~-----------~~ 213 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILME------D-----------IK 213 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--HHHHHhccC------C-----------cc
Confidence 3457899999999999889999999999999999999999999765331 111111100 0 00
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
.+.....++.+++.+|++.||++|| ++.|+++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 1122345678899999999999997 8888875
No 82
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.2e-35 Score=322.66 Aligned_cols=249 Identities=31% Similarity=0.455 Sum_probs=201.6
Q ss_pred CCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
+|++.+.||+|+||.||+|.++++..+|+|++.... ....++.+|+++++. ++||||+++++++......++|||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMK----LSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHh----CCCCCEEEEEEEEcCCCceEEEEe
Confidence 477889999999999999998777789999987542 234578889999986 679999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 886 YMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
|+++++|.+++... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 99999999999753 4689999999999999999999999 9999999999999999999999999998765432221
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 965 VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
......++..|+|||...+..++.++||||||+++|||++ |+.||....... .+ ..... . .
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~-~~~~~-~---------------~ 218 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-VV-ESVSA-G---------------Y 218 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-HH-HHHHc-C---------------C
Confidence 1122234467999999988899999999999999999999 888987643311 11 11110 0 0
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
....+...+.++.+++.+|++.+|++||++.|+++.|
T Consensus 219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0011222456788999999999999999999999886
No 83
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.2e-35 Score=334.73 Aligned_cols=241 Identities=29% Similarity=0.405 Sum_probs=193.1
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
++||+|+||+||+|+.. +++.||+|+++.... ...+.+..|..++... .+||||+++++++..+...++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~---~~hp~i~~~~~~~~~~~~~~lv~e~ 77 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA---WEHPFLTHLFCTFQTKEHLFFVMEY 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc---cCCCCccceeeEEEcCCEEEEEEcC
Confidence 46999999999999975 578999999976422 1223445566666532 4799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.++++...++++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 78 ~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~ 153 (316)
T cd05592 78 LNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKA 153 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccc
Confidence 99999999998888899999999999999999999999 99999999999999999999999999997653322 223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||..|+|||++.+..++.++||||+||++|||++|+.||.+...... ....... . ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~--~~~i~~~------~-----------~~ 214 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL--FDSILND------R-----------PH 214 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHcC------C-----------CC
Confidence 445789999999999988999999999999999999999999987544211 1111100 0 00
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCHH-HHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNVK-EVL 1077 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil 1077 (1088)
.+.....++.+++.+|++.||++||++. ++.
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1122335677888999999999999875 443
No 84
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-35 Score=338.73 Aligned_cols=261 Identities=23% Similarity=0.250 Sum_probs=199.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
.++|++.+.||+|+||.||+|.+. +++.||+|+... ..+.+|++++++ ++||||+++++++..+...++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~----l~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRA----INHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHh----CCCCCCCCEeEEEEECCeeEE
Confidence 367999999999999999999975 688999997543 346789999987 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
|||++. ++|.+++.....+++.+++.++.|++.||+|||++ +||||||||+||+++.++.+||+|||+++......
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999995 69999998888899999999999999999999999 99999999999999999999999999997543322
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch------hHHHHHHhhhccCC---CCC--
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE------CLVEWGRRVMGYGR---HGP-- 1031 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~------~~~~~~~~~~~~~~---~~~-- 1031 (1088)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .............. ...
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 2233446799999999999888999999999999999999999988754321 00111000000000 000
Q ss_pred Cccccchhh---------c-CCCc--cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAVIPVVL---------L-GSGL--AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~~~~~~---------~-~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......... . .... ......+.++.+++.+|++.||++|||++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 0 0000 001123457889999999999999999999984
No 85
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=337.84 Aligned_cols=362 Identities=25% Similarity=0.255 Sum_probs=198.4
Q ss_pred cCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCcccCCCCC-CCceeecccccccccccCchhhhcccceEEecc
Q 001384 104 QLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDLNLSGLR-SLEILDLSVNRIHGEISFSFPAICEKLVVANLS 182 (1088)
Q Consensus 104 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~ 182 (1088)
.-+.||+|+|.+...-+..|.++++|++++|.+|.++..+.+++.+ +|+.|+|.+|.|+..-...+. .++.|+.|||+
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~-~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLISSVTSEELS-ALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeeeccccccccHHHHH-hHhhhhhhhhh
Confidence 3456777777777666777777777777777777777666655543 477777777777654444443 33667777777
Q ss_pred CccCCCCCCccccCCCCCcEEEccCccccc---cccccCcccceecccCcccccccccccccCCCccCEEEcCCCccccc
Q 001384 183 LNNLTGRIDTCFDGCLNLRYLDLSSNNFRG---NIWNGLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEFIGD 259 (1088)
Q Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~---~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 259 (1088)
.|.|+.+....|..-.++++|+|++|+++. .-+.++.+|..|.|++|+++ .++...|++++.|+.|+|..|+|.-.
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhccccceeee
Confidence 777777766667666677777777777664 23444455555555555554 34555555555555555555555422
Q ss_pred CcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhhhcc
Q 001384 260 FPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRF 339 (1088)
Q Consensus 260 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 339 (1088)
--..|.++++|+.|.|..|.|+......|..+.++++|+|+.|++..+--.++.++++|+.|+||+|.|..+-++.+.-.
T Consensus 237 e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 237 EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred hhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhc
Confidence 23445555555555555555554444455555555555555555555555555555555555555555555544444444
Q ss_pred cccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCC---cccCCCCCCc
Q 001384 340 TQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIP---AVYGNMPNLQ 416 (1088)
Q Consensus 340 ~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~ 416 (1088)
++|+.|+|++|+ +....+..|..+..|++|.|++|+++..-...|..+++|+.|||++|.++..+. ..|..|++|+
T Consensus 317 qkL~~LdLs~N~-i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 317 QKLKELDLSSNR-ITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred ccceeEeccccc-cccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 444444444444 233344444444444444555554443333344444555555555555444332 1234445555
Q ss_pred EEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEcc
Q 001384 417 TLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLS 469 (1088)
Q Consensus 417 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 469 (1088)
.|+|.+|+|....-..|.++..|++|||.+|.|...-|..|..+ .|++|.+.
T Consensus 396 kL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 396 KLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred heeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 55555555542222344455555555555555544444444444 44444443
No 86
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.7e-35 Score=340.90 Aligned_cols=251 Identities=23% Similarity=0.335 Sum_probs=198.0
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.|+..+.||+|+||+||+|++. +++.||+|++.+... .....+..|++++.. ++||||+++++++.+.+..+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~----l~h~~iv~l~~~~~~~~~~~ 77 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE----ADNEWVVKLYYSFQDKDNLY 77 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh----cCCCCeeeeEEEEecCCEEE
Confidence 5888999999999999999975 688999999976432 223467889999886 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++|+|.+++.+...+++..++.++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++.+...
T Consensus 78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 78 FVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998888899999999999999999999999 9999999999999999999999999997543110
Q ss_pred CC----------------------------------------------cccccccccccccCccccCCCCCCcchhHHHH
Q 001384 962 DS----------------------------------------------HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSF 995 (1088)
Q Consensus 962 ~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 995 (1088)
.. .......||..|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 00123569999999999988889999999999
Q ss_pred HHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhh--hcccCCCCCCCH
Q 001384 996 GVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVR--CTAEAPNARPNV 1073 (1088)
Q Consensus 996 G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~ 1073 (1088)
||++|||++|+.||.......... ......... ..+ .......++.+++.+ |+..+|..||++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~--~i~~~~~~~----~~~---------~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQL--KVINWENTL----HIP---------PQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHH--HHHcccccc----CCC---------CCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 999999999999998754422211 111000000 000 011123456677777 556677779999
Q ss_pred HHHHH
Q 001384 1074 KEVLA 1078 (1088)
Q Consensus 1074 ~eil~ 1078 (1088)
+|+++
T Consensus 300 ~~~l~ 304 (381)
T cd05626 300 DDIKA 304 (381)
T ss_pred HHHhc
Confidence 99975
No 87
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.1e-35 Score=329.26 Aligned_cols=256 Identities=30% Similarity=0.468 Sum_probs=207.6
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
++|.+.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++++++ ++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTN----LQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhc----CCCCCcceEEEEEccCC
Confidence 35778899999999999999842 345699999887655555778999999986 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc
Q 001384 879 EKILVYEYMEGGSLEDIISDRT----------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD 942 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~ 942 (1088)
..++||||+++++|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 9999999999999999996532 388999999999999999999999 999999999999999
Q ss_pred CCCCEEEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchh-HHHH
Q 001384 943 KEGKALVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEEC-LVEW 1019 (1088)
Q Consensus 943 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~-~~~~ 1019 (1088)
.++.++|+|||++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..+.
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999976543221 11233456788999999988899999999999999999999 99998765431 1111
Q ss_pred HHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1020 GRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
... .. ....+...+..+.+++.+|+++||++||++.+|+++|+++.+.
T Consensus 238 ---~~~-~~---------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 238 ---ITQ-GR---------------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ---HhC-CC---------------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 110 00 0001122345788999999999999999999999999998653
No 88
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-35 Score=328.19 Aligned_cols=253 Identities=31% Similarity=0.482 Sum_probs=204.7
Q ss_pred CCCCccceecccCceEEEEEEeCC------CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD------GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
++|.+.+.||+|+||.||+|...+ ++.||||.+...... ..+.+.+|++++.. +.||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN----FQHENIVKFYGVCTEG 80 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHh----cCCCCchheeeEEecC
Confidence 458888999999999999998643 478999999865433 45688999999986 6799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcC--------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC
Q 001384 878 SEKILVYEYMEGGSLEDIISDRT--------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK 943 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~--------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~ 943 (1088)
...++||||+++++|.++++..+ .+++.++..++.|++.|++|||+. +++||||||+||+++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~ 157 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGY 157 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcC
Confidence 99999999999999999997542 478999999999999999999999 9999999999999999
Q ss_pred CCCEEEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHH
Q 001384 944 EGKALVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGR 1021 (1088)
Q Consensus 944 ~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~ 1021 (1088)
++.+|++|||+++....... .......++..|+|||++.+..++.++||||+|+++|||++ |..||....... ...
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~~ 235 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VIE 235 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHH
Confidence 99999999999976533221 11223345788999999999999999999999999999998 999987654311 111
Q ss_pred hhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1022 RVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.... +.....+...+..+.+++.+|++.||++||++.||++.|++
T Consensus 236 ~~~~----------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 236 CITQ----------------GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHc----------------CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1110 00001112334678899999999999999999999999864
No 89
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=9e-40 Score=341.34 Aligned_cols=424 Identities=27% Similarity=0.381 Sum_probs=308.8
Q ss_pred ccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcC
Q 001384 245 SLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLS 324 (1088)
Q Consensus 245 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 324 (1088)
.++.++.++|+++ .+|.+++.+.+|+.|+.++|++. .+|+.++.+-.|+.|+..+|+++. .|..+.++.+|..|++.
T Consensus 92 ~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~s-lp~~~~~~~~l~~l~~~ 168 (565)
T KOG0472|consen 92 ALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQISS-LPEDMVNLSKLSKLDLE 168 (565)
T ss_pred HHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcccccccc-CchHHHHHHHHHHhhcc
Confidence 4455555555555 77888888888999999999988 778888888889999998888876 57778888889999999
Q ss_pred CCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCc
Q 001384 325 SNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGS 404 (1088)
Q Consensus 325 ~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 404 (1088)
+|++...+|.... ++.|+.|+..+|-+ ...+..++.+.+|+.|+|.+|++. .+| +|..+..|++|+++.|+|. .
T Consensus 169 ~n~l~~l~~~~i~-m~~L~~ld~~~N~L--~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~ 242 (565)
T KOG0472|consen 169 GNKLKALPENHIA-MKRLKHLDCNSNLL--ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-M 242 (565)
T ss_pred ccchhhCCHHHHH-HHHHHhcccchhhh--hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-h
Confidence 9999888888777 88888888888864 344666788999999999999999 788 8999999999999999999 7
Q ss_pred CCcccC-CCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCchhhc
Q 001384 405 IPAVYG-NMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPEVMT 483 (1088)
Q Consensus 405 ~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~ 483 (1088)
+|.+.. ++++|.+|||.+|+++ ..|+.++.+.+|++||+++|.++ .+|.++|++ .|+.|-+.||++. +|-.++.+
T Consensus 243 lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlr-TiRr~ii~ 318 (565)
T KOG0472|consen 243 LPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLR-TIRREIIS 318 (565)
T ss_pred hHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchH-HHHHHHHc
Confidence 887776 8999999999999999 89999999999999999999999 689999999 9999999999998 67666654
Q ss_pred cCCCCCccccccccCCcccccCCccccccccccCCCCCCCcce--eeehhccccchhhhhcccCCcccccccCCCccc--
Q 001384 484 IGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFV--YTILTRKSCRSLWDRLLKGTGIFPVCLPGLASR-- 559 (1088)
Q Consensus 484 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-- 559 (1088)
.+....+.+-...... .|-++...- ..-....++..++ |...+. ...+...+....+|.........
T Consensus 319 ~gT~~vLKyLrs~~~~----dglS~se~~-~e~~~t~~~~~~~~~~~~i~t----kiL~~s~~qlt~VPdEVfea~~~~~ 389 (565)
T KOG0472|consen 319 KGTQEVLKYLRSKIKD----DGLSQSEGG-TETAMTLPSESFPDIYAIITT----KILDVSDKQLTLVPDEVFEAAKSEI 389 (565)
T ss_pred ccHHHHHHHHHHhhcc----CCCCCCccc-ccccCCCCCCcccchhhhhhh----hhhcccccccccCCHHHHHHhhhcc
Confidence 4433222221110000 000000000 0000011111111 111000 00111111111222222111110
Q ss_pred --------------------ceeeeceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCc-cceEEEccC
Q 001384 560 --------------------TFQITGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQL-PLIVLNLTR 618 (1088)
Q Consensus 560 --------------------~~~~l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-~l~~l~l~~ 618 (1088)
.-+.+..+.+++|.++ -+|..+..+++|..|+|++|-+. .+|.+++.+ .|+.||++.
T Consensus 390 Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 390 VTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred eEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccc
Confidence 0011122445555554 67777888999999999999888 899999888 799999999
Q ss_pred CcccccCCccccCCccCcEEEccccccCCcCCcc-cccccccceeeccCCCCccccCCCCCcccccccCccCCCCCCC
Q 001384 619 NNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPAS-FNNLTELSKLNISYNPLVSGTIPSTGQLATFEKTSYLGDPLLD 695 (1088)
Q Consensus 619 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~l~l~~N~l~~g~ip~~~~~~~~~~~~~~~n~~~~ 695 (1088)
|+|. .+|..+..+..|+.+-.++|++. .+|.+ +.++.+|..|||.+|.+ .-..|..|.+.++...-..|||.-.
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~-~vd~~~l~nm~nL~tLDL~nNdl-q~IPp~LgnmtnL~hLeL~gNpfr~ 542 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIG-SVDPSGLKNMRNLTTLDLQNNDL-QQIPPILGNMTNLRHLELDGNPFRQ 542 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhcccccc-ccChHHhhhhhhcceeccCCCch-hhCChhhccccceeEEEecCCccCC
Confidence 9998 89999999999999888899997 55554 99999999999999999 3333445888888888889998764
No 90
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.6e-35 Score=333.49 Aligned_cols=242 Identities=27% Similarity=0.361 Sum_probs=195.4
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+|++.+.||+|+||.||+|+++ +++.||||++.+... ...+.+..|.+++.... +|++|+++++++.+.+..|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~i~~~~~~~~~~~~~~ 77 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG---KPPFLTQLHSCFQTMDRLY 77 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC---CCCceeeeEEEEEcCCEEE
Confidence 4788899999999999999976 578999999976422 22345677888877632 4567889999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++|+|.+++.....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 78 lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 78 FVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999999998888899999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
. .......||..|+|||++.+..++.++||||+||++|||++|+.||.+...... ........
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~--~~~i~~~~-------------- 217 (324)
T cd05587 155 G-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL--FQSIMEHN-------------- 217 (324)
T ss_pred C-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHHcCC--------------
Confidence 1 123345789999999999998999999999999999999999999987543211 11111000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
...+......+.+++.+|++.||.+|++.
T Consensus 218 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ---VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00011233567889999999999999976
No 91
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2e-35 Score=333.60 Aligned_cols=237 Identities=29% Similarity=0.393 Sum_probs=193.3
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||+||+|+++ +++.||||++.+... .....+..|..++... .+||||+++++++.+.+..|+||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~---~~h~~iv~~~~~~~~~~~~~iv~Ey 77 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLA---RNHPFLTQLYCCFQTPDRLFFVMEF 77 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc---cCCCchhceeeEEEcCCEEEEEEcC
Confidence 46999999999999976 588999999976421 2234566777777653 3799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 78 ~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~ 153 (320)
T cd05590 78 VNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTT 153 (320)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccc
Confidence 99999999998888899999999999999999999999 99999999999999999999999999987643221 223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... +....+..... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~~~~i~~~~~-----------------~ 214 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAILNDEV-----------------V 214 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcCCC-----------------C
Confidence 3457899999999999889999999999999999999999999875431 11122211000 0
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
.+.....++.+++.+|++.||++||++
T Consensus 215 ~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 215 YPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 111234567889999999999999998
No 92
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.2e-35 Score=340.84 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=205.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||+||+|++. +++.||||++..... .....+..|++++.. ++||||+++++++.+++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~ 76 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD----ADSPWIVKLYYSFQDEEHL 76 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHh----cCCCCccchhhheecCCeE
Confidence 46899999999999999999976 689999999976432 234567889999886 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++|+|.+++.+...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 77 YLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 99999999999999998888899999999999999999999998 999999999999999999999999999986643
Q ss_pred CC----------------------------CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCC
Q 001384 961 GD----------------------------SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGG 1012 (1088)
Q Consensus 961 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~ 1012 (1088)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 11223456899999999999989999999999999999999999999876
Q ss_pred chhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC-HHHHHH
Q 001384 1013 EECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN-VKEVLA 1078 (1088)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~eil~ 1078 (1088)
... +.......+..... .+ .......++.+++.+|+. ||.+||+ ++|+++
T Consensus 234 ~~~--~~~~~i~~~~~~~~----~p---------~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 234 TLQ--ETYNKIINWKESLR----FP---------PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CHH--HHHHHHhccCCccc----CC---------CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 531 11222221111000 00 011134578888899997 9999999 999986
No 93
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-35 Score=327.68 Aligned_cols=252 Identities=29% Similarity=0.378 Sum_probs=211.0
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccch---HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE---REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
....|++.+.||+|.||.||+++.+ +|+.+|+|++.+...... ..+.+|+++|+++. .|||||.++++|++..
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~---~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS---GHPNIVQLKDAFEDPD 109 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc---CCCCEEEEEEEEEcCC
Confidence 3467889999999999999999987 499999999988765443 58999999999843 3999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC----CCEEEeeccc
Q 001384 879 EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE----GKALVTDFGL 954 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~----~~~kl~Dfg~ 954 (1088)
..++|||+++||.|.+.+... .+++.++..++.|++.++.|+|+. ||+|||+||+|+++... +.+|++|||+
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999999776 499999999999999999999998 99999999999999743 4799999999
Q ss_pred ceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 955 ARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 955 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
+..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||.+..+...........+ ....
T Consensus 186 a~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~---~f~~- 259 (382)
T KOG0032|consen 186 AKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF---DFTS- 259 (382)
T ss_pred ceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC---CCCC-
Confidence 998765 3445678999999999999999999999999999999999999999998764222221111111 0000
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+........+.+++++|+..||.+|+++.++++
T Consensus 260 -----------~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 260 -----------EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -----------CCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 112233466778888999999999999999987
No 94
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.5e-35 Score=333.75 Aligned_cols=247 Identities=27% Similarity=0.342 Sum_probs=196.5
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
|++.+.||+|+||.||+|.++ +++.||||++++... ...+.+..|.+++.... .++||||+++++++......|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~-~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETAN-SERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-ccCCCChhceeeEEEcCCEEEE
Confidence 667899999999999999975 689999999975421 22345667776654332 3689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++|+|..+++. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 80 v~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 80 VMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 9999999999998865 4699999999999999999999999 99999999999999999999999999987533211
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||.+.... +..........
T Consensus 156 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~~~-------------- 218 (324)
T cd05589 156 -DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--EVFDSIVNDEV-------------- 218 (324)
T ss_pred -CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC--------------
Confidence 2233467899999999999889999999999999999999999999875432 11121110000
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCC-----HHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPN-----VKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~ 1078 (1088)
..+......+.+++.+|++.||.+||+ +.++++
T Consensus 219 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 ---RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 011223456788999999999999994 555544
No 95
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=337.03 Aligned_cols=363 Identities=26% Similarity=0.305 Sum_probs=330.9
Q ss_pred eeEEeccccccccccccccccCCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCcc--cCCCCCCCceeecc
Q 001384 80 RVNGLNLTDWNISGDIFNNFSALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDL--NLSGLRSLEILDLS 157 (1088)
Q Consensus 80 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls 157 (1088)
.+..|++++|.|...-+..|-++++|+.+++.+|.++ .||...+...+|+.|+|.+|.|+... .++.++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3567999999999888888999999999999999999 89998888899999999999999754 68899999999999
Q ss_pred cccccccccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCccccc---cccccCcccceecccCcccccc
Q 001384 158 VNRIHGEISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRG---NIWNGLAQLVEFSVSENVLSGV 234 (1088)
Q Consensus 158 ~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~---~~~~~l~~L~~L~L~~n~l~~~ 234 (1088)
.|.|+..--.+|++. .++++|+|++|.|+......|.++.+|..|.|+.|+++. ..+..|++|+.|+|..|.|. .
T Consensus 158 rN~is~i~~~sfp~~-~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-i 235 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAK-VNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR-I 235 (873)
T ss_pred hchhhcccCCCCCCC-CCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee-e
Confidence 999996666667665 689999999999999999999999999999999999875 56778999999999999998 5
Q ss_pred cccccccCCCccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccC
Q 001384 235 VSSSVFKENCSLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLN 314 (1088)
Q Consensus 235 ~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 314 (1088)
+....|.++.+|+.|.|..|.+...-...|..+.++++|+|+.|+++..-..++.+++.|+.|+|++|.|..+.+++..-
T Consensus 236 ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf 315 (873)
T KOG4194|consen 236 VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF 315 (873)
T ss_pred ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh
Confidence 56778999999999999999999888899999999999999999999888889999999999999999999999999999
Q ss_pred CCCCcEEEcCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCc---cccCCcCc
Q 001384 315 LSKLEVLDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPV---EISQMRSL 391 (1088)
Q Consensus 315 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~l~~l~~L 391 (1088)
.++|++|+|++|+|+...+..|..|.+|+.|.|++|+ ++.+....|..+++|+.|||++|.++..+.+ .|..+++|
T Consensus 316 tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Ns-i~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~L 394 (873)
T KOG4194|consen 316 TQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNS-IDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSL 394 (873)
T ss_pred cccceeEeccccccccCChhHHHHHHHhhhhcccccc-hHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhh
Confidence 9999999999999999999999999999999999999 4566677888999999999999999876654 47789999
Q ss_pred ceeeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEcccc
Q 001384 392 KFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANN 447 (1088)
Q Consensus 392 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 447 (1088)
+.|.|.+|++..+.-.+|..++.|++|||.+|.|...-|..|..+ .|++|.+..-
T Consensus 395 rkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 395 RKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred hheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 999999999995555789999999999999999998889999998 8998887553
No 96
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.1e-35 Score=340.33 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=200.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||+||+|++. +++.||||++..... .....+.+|++++.. ++||||+++++++.++...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~----l~h~~iv~~~~~~~~~~~~ 76 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE----ADNPWVVKLYYSFQDENYL 76 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh----CCCCCCcceEEEEEcCCeE
Confidence 46889999999999999999976 689999999976421 223457789999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++|+|.+++.....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 77 ~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 77 YLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred EEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999999998888899999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCc-------------------------------------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHH
Q 001384 961 GDSH-------------------------------------VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELA 1003 (1088)
Q Consensus 961 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell 1003 (1088)
.... ......||+.|+|||++....++.++||||+||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 011246899999999998889999999999999999999
Q ss_pred hCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC---HHHHHH
Q 001384 1004 TGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN---VKEVLA 1078 (1088)
Q Consensus 1004 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~ 1078 (1088)
+|..||...... +.......+.... ..+. .......+.+++.+|+. +|.+|++ ++|+++
T Consensus 234 ~G~~Pf~~~~~~--~~~~~i~~~~~~~----~~~~---------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDNPQ--ETYRKIINWKETL----QFPD---------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCCHH--HHHHHHHcCCCcc----CCCC---------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999999875432 1112222111100 0000 01123466778889996 9999998 888765
No 97
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.7e-35 Score=333.10 Aligned_cols=241 Identities=26% Similarity=0.367 Sum_probs=196.8
Q ss_pred ceecccCceEEEEEEe----CCCcEEEEEEccccCc----cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 811 RIIGKGGFGTVYRGVL----PDGREVAVKKLQREGL----EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+.||+|+||.||+|+. ..++.||||++.+... .....+..|+++++. ++||||+++++++..++..|+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~----l~hp~iv~~~~~~~~~~~~~l 77 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEA----VKHPFIVDLIYAFQTGGKLYL 77 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHh----CCCCchhceeeEEecCCeEEE
Confidence 6799999999999985 2578999999976422 223457789999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++|+|.++++....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 78 ILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred EEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999999999888899999999999999999999999 99999999999999999999999999987543222
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ..........
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--~~~~~~~~~~--------------- 216 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--KTIDKILKGK--------------- 216 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCC---------------
Confidence 2233457899999999998888999999999999999999999999875431 1111111000
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
...+......+.+++.+|++.||++|| ++.++++
T Consensus 217 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 --LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 001122335678899999999999999 7777755
No 98
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.9e-35 Score=333.06 Aligned_cols=242 Identities=27% Similarity=0.331 Sum_probs=196.2
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+|++.+.||+|+||.||+|+++ +++.||+|++.+.... ....+..|..++... .+|++|+++++++.+.+..+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~---~~~~~i~~~~~~~~~~~~~~ 77 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALS---GKPPFLTQLHSCFQTMDRLY 77 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc---cCCCeEeeEEEEEecCCEEE
Confidence 4788899999999999999976 5789999999865322 223456677776653 36899999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++|+|.+++.....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 78 lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 78 FVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999999998888899999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... ...+.....
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~--~~~i~~~~~------------- 218 (323)
T cd05616 155 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIMEHNV------------- 218 (323)
T ss_pred -CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH--HHHHHhCCC-------------
Confidence 1223345789999999999999999999999999999999999999987644211 111110000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
..+.....++.+++.+|++.||++|++.
T Consensus 219 ----~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 ----AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ----CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 0112234567889999999999999985
No 99
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.7e-35 Score=336.70 Aligned_cols=203 Identities=25% Similarity=0.376 Sum_probs=176.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||+||+|... +++.||+|++.+... .....+..|+.++.+ ++||||+++++++.++...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~----~~~~~iv~~~~~~~~~~~~ 76 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE----ADSLWVVKMFYSFQDKLNL 76 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHh----CCCCCcceEEEEEecCCeE
Confidence 46889999999999999999975 688999999976422 223467788888886 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+||||+++|+|.+++.+...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 77 YLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999999999888999999999999999999999999 999999999999999999999999999875432
Q ss_pred CCC----------------------------------cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCC
Q 001384 961 GDS----------------------------------HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGR 1006 (1088)
Q Consensus 961 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~ 1006 (1088)
... .......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 0012357999999999998889999999999999999999999
Q ss_pred cCCCCCch
Q 001384 1007 RALEGGEE 1014 (1088)
Q Consensus 1007 ~p~~~~~~ 1014 (1088)
.||.+...
T Consensus 234 ~Pf~~~~~ 241 (363)
T cd05628 234 PPFCSETP 241 (363)
T ss_pred CCCCCCCH
Confidence 99987543
No 100
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=317.65 Aligned_cols=246 Identities=24% Similarity=0.363 Sum_probs=210.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+=|.+.+.||+|.|++|-+|++- +|..||||++.+.... ...++.+|++.|+. ++|||||++|++.......|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKL----VQHpNiVRLYEViDTQTKly 93 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKL----VQHPNIVRLYEVIDTQTKLY 93 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHH----hcCcCeeeeeehhcccceEE
Confidence 45778899999999999999965 8999999999876543 34678999999986 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc-CCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD-KEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~-~~~~~kl~Dfg~a~~~~ 959 (1088)
+|+|.-++|+|+|||.++ ..+.+.-+.+++.||+.|+.|+|+. .+|||||||+||++- .-|-||++|||++-.+.
T Consensus 94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 999999999999998654 4599999999999999999999999 899999999998875 56899999999998876
Q ss_pred CCCCcccccccccccccCccccCCCCCC-cchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQAT-TKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
++. ...+.+|...|-|||++.+-.|+ +++||||+|||+|.+++|+.||+..++. +...
T Consensus 171 PG~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS--ETLT----------------- 229 (864)
T KOG4717|consen 171 PGK--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS--ETLT----------------- 229 (864)
T ss_pred Ccc--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch--hhhh-----------------
Confidence 543 45667899999999998888886 5689999999999999999999976541 1111
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.++.+.-..|.....++.++|..|+..||.+|.+.+||+.
T Consensus 230 mImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 230 MIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1223444557788889999999999999999999999974
No 101
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.7e-35 Score=320.92 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=203.5
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
++|++.+.||+|+||.||+|...++..+|+|.+..... ....+.+|+.++++ ++|+|++++++++. ....++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~----l~~~~i~~~~~~~~-~~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKK----LRHDKLVQLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHh----cCCCceEEEEeEEC-CCCcEEEE
Confidence 46888999999999999999988888899999976533 34678999999987 67999999999875 45678999
Q ss_pred EecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 885 EYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||+++++|.++++.. ..+++.+++.++.|++.|++|||+. +++||||||+||++++++.++++|||.+..+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999999753 3589999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
........++..|+|||...+..++.++||||||+++|||++ |..||.+... .+....... .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~-~-------------- 219 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQVER-G-------------- 219 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc-C--------------
Confidence 222222345668999999888889999999999999999999 8889876432 111111110 0
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
...+.+...+..+.+++.+|++++|++||+++++.+.|++
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 220 -YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0001122334578899999999999999999999999875
No 102
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.4e-35 Score=327.96 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=199.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.++|++.+.||+|+||.||+|+.+ +++.||||++..... .....+.+|+.+++. ++||||+++++++.++...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~ 79 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKG----LKHANIVLLHDIIHTKETLT 79 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhh----CCCCCcCeEEEEEecCCeEE
Confidence 367999999999999999999976 688999999875432 223467789999986 68999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+||||++ ++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 80 LVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 9999996 5888877654 5689999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC----CC---
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG----PG--- 1032 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~--- 1032 (1088)
.. .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.+..+................ ..
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 156 PS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 22 22234567899999998754 46889999999999999999999999875432222111111000000 00
Q ss_pred -ccccchhhcCCCccccH------HHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1033 -RAVIPVVLLGSGLAEGA------EEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1033 -~~~~~~~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+............ .....+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000000000000 11245778999999999999999999985
No 103
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.6e-35 Score=333.05 Aligned_cols=242 Identities=27% Similarity=0.356 Sum_probs=195.6
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
++||+|+||.||+|+++ +++.||+|++.+... .....+..|.+++... .+||||+++++++.+++..|+||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~---~~hp~i~~~~~~~~~~~~~~lv~E~ 77 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALA---AKHPFLTALHCCFQTKDRLFFVMEY 77 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhc---cCCCCccceeeEEEcCCeEEEEEeC
Confidence 46999999999999976 578999999976422 2234566788877653 3799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~ 153 (321)
T cd05591 78 VNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTT 153 (321)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-ccc
Confidence 99999999998888899999999999999999999999 99999999999999999999999999987643222 223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||..|+|||++.+..++.++||||+||++|||++|+.||....+.. ......... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--~~~~i~~~~------~~----------- 214 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--LFESILHDD------VL----------- 214 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--HHHHHHcCC------CC-----------
Confidence 34578999999999998899999999999999999999999998764421 111121100 00
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCC-------CHHHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARP-------NVKEVLA 1078 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RP-------s~~eil~ 1078 (1088)
.+.....++.+++.+|++.||++|| ++.++++
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 0111235678899999999999999 6666653
No 104
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=295.39 Aligned_cols=262 Identities=25% Similarity=0.345 Sum_probs=206.6
Q ss_pred HcCCCCccceecccCceEEEEEE-eCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC----
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGV-LPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG---- 877 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~---- 877 (1088)
..++|++.+.+|+|||+.||.++ ..+++.+|+|++.....+..+..++|++..++ ++|||+++++++...+
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rk----f~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRK----FNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHh----hCCcchHHHHHHHHHhhccC
Confidence 35789999999999999999999 45788999999988766777889999999987 7899999999987543
Q ss_pred -CeEEEEEEecCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeec
Q 001384 878 -SEKILVYEYMEGGSLEDIISDR----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDF 952 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Df 952 (1088)
.+.|++++|...|+|.+.++.. ..+++.+.++|+.+|++||++||+. .++++||||||.||++++++.+++.||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 3489999999999999988653 3599999999999999999999998 345999999999999999999999999
Q ss_pred ccceeecCC--CCcc------cccccccccccCccccCC---CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHH
Q 001384 953 GLARVVSAG--DSHV------STTIAGTVGYVAPEYGQT---WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGR 1021 (1088)
Q Consensus 953 g~a~~~~~~--~~~~------~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~ 1021 (1088)
|.++...-. .+.. ...-..|..|+|||.+.- ...++++|||||||++|+|+.|..||+...+
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------- 246 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------- 246 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-------
Confidence 998754311 1110 122346889999997654 3568999999999999999999999975211
Q ss_pred hhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1022 RVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
+.....-.+-... ...+........+.++++.|++.||.+||++.|++..++.++
T Consensus 247 ------~GgSlaLAv~n~q--~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 ------QGGSLALAVQNAQ--ISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ------cCCeEEEeeeccc--cccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 0000000000000 011122336678999999999999999999999999998765
No 105
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.5e-35 Score=334.74 Aligned_cols=258 Identities=29% Similarity=0.447 Sum_probs=203.1
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEec-
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD- 876 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~- 876 (1088)
++|++.+.||+|+||.||+|... +++.||+|++...... ..+.+..|+.++.++. +|+||+++++++..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~---~h~niv~~~~~~~~~ 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG---HHLNVVNLLGACTKP 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc---cCcchhheeeeEecC
Confidence 57999999999999999999742 3478999999754322 2346778999888732 79999999998765
Q ss_pred CCeEEEEEEecCCCCHHHHHhhc---------------------------------------------------------
Q 001384 877 GSEKILVYEYMEGGSLEDIISDR--------------------------------------------------------- 899 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------- 899 (1088)
+...+++|||+++++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 45688999999999999998542
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc-ccccccccc
Q 001384 900 ----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV-STTIAGTVG 974 (1088)
Q Consensus 900 ----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~ 974 (1088)
.++++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||+++.+....... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 2578999999999999999999999 99999999999999999999999999998764332222 223455678
Q ss_pred ccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHH
Q 001384 975 YVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMS 1053 (1088)
Q Consensus 975 y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1088)
|+|||++.+..++.++||||+||++|||++ |..||.+..... .+...... .. ....+.....
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~-~~---------------~~~~~~~~~~ 303 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKE-GT---------------RMRAPEYATP 303 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhc-cC---------------CCCCCccCCH
Confidence 999999999999999999999999999998 999997643211 11111110 00 0001122345
Q ss_pred HHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1054 ELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1054 ~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
++.+++.+|++.+|++||++.|+++.|++++.
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 78899999999999999999999999999875
No 106
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.9e-35 Score=326.37 Aligned_cols=267 Identities=25% Similarity=0.328 Sum_probs=197.2
Q ss_pred CCCCccceecccCceEEEEEEeC--CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEec----
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP--DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD---- 876 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~---- 876 (1088)
.+|++.+.||+|+||+||+|++. +++.||+|++...... ....+.+|+++++.+. .+.||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE-TFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhc-ccCCCCcceEEEEEecccCC
Confidence 36899999999999999999863 4688999998754322 2345667777776543 3579999999998852
Q ss_pred -CCeEEEEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 877 -GSEKILVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 877 -~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
....++||||++ ++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 456899999996 5999998753 3589999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCCC
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 1032 (1088)
+++..... .......|+..|+|||.+....++.++||||+||++|||++|+.||.+..+ ..................
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 156 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred ceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 99876432 223445689999999999888999999999999999999999999987644 111111111100000000
Q ss_pred --ccccchhhcCCCccc-----cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1033 --RAVIPVVLLGSGLAE-----GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1033 --~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+.......... .......+.+++.+|++.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000000000000 0123356778999999999999999999975
No 107
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.6e-35 Score=307.64 Aligned_cols=266 Identities=26% Similarity=0.312 Sum_probs=201.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCc-eeEEeeEEecCC--
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPN-LVTLYGWCLDGS-- 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~n-iv~l~~~~~~~~-- 878 (1088)
..|...++||+|+||+||+|+.+ +|+.||+|+++-.... ......+|+.++.. ++|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~----L~~~~~iv~L~dv~~~~~~~ 86 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKR----LSHANHIVRLHDVIHTSNNH 86 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHH----hCCCcceEEEEeeeeecccc
Confidence 34666788999999999999965 7899999999866432 23456889999997 67999 999999998877
Q ss_pred ----eEEEEEEecCCCCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEe
Q 001384 879 ----EKILVYEYMEGGSLEDIISDRT----RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVT 950 (1088)
Q Consensus 879 ----~~~lv~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~ 950 (1088)
..++||||++- +|.+++.... .++...+..++.|++.||+|+|++ +|+||||||+||+|+++|.+||+
T Consensus 87 ~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKla 162 (323)
T KOG0594|consen 87 RGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLA 162 (323)
T ss_pred cccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeee
Confidence 78999999966 9999997755 477889999999999999999999 99999999999999999999999
Q ss_pred ecccceeecCCCCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccC-
Q 001384 951 DFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYG- 1027 (1088)
Q Consensus 951 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~- 1027 (1088)
|||+|+.+.-.. ...+...+|..|+|||++.+. .|+...||||+||+++||++++..|.+..+. ...-....+.-+
T Consensus 163 DFGlAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 163 DFGLARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred ccchHHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 999999665222 223455788999999976654 8999999999999999999999999987551 111112222111
Q ss_pred -CCCCCccccchhhcC-C----CccccHHH---HHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1028 -RHGPGRAVIPVVLLG-S----GLAEGAEE---MSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1028 -~~~~~~~~~~~~~~~-~----~~~~~~~~---~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
..++.-...+..... . ........ ..+..+++.+|++.+|.+|.++++++..
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111111111111000 0 00001111 1367889999999999999999999875
No 108
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.7e-35 Score=336.25 Aligned_cols=265 Identities=26% Similarity=0.371 Sum_probs=197.3
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC-----
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG----- 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~----- 877 (1088)
+|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|+++++. ++||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~hpniv~~~~~~~~~~~~~~ 76 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRL----LRHPDIVEIKHIMLPPSRREF 76 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHh----CCCCCEeeecceEeccCCCCC
Confidence 5888999999999999999975 68999999987532 2233467889999986 6799999999988643
Q ss_pred CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 878 SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
...|+||||++ ++|.+++.....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 77 KDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred ceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 24799999995 69999998888899999999999999999999999 999999999999999999999999999976
Q ss_pred ecCCCC--cccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCC---
Q 001384 958 VSAGDS--HVSTTIAGTVGYVAPEYGQT--WQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRH--- 1029 (1088)
Q Consensus 958 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~--- 1029 (1088)
...... .......||..|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..............
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 432211 12234578999999998765 67899999999999999999999999765321 11111111000000
Q ss_pred -----CCCccccchhhcCCCc---cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 -----GPGRAVIPVVLLGSGL---AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 -----~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
................ .........+.+++.+|++.||++||+++|+++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000000000000 000112346788999999999999999999985
No 109
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.6e-34 Score=317.97 Aligned_cols=257 Identities=24% Similarity=0.400 Sum_probs=208.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+++++. ++||||+++++++.+.+..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~ 77 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQ----LNHPNVIKYLDSFIEDNEL 77 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHh----CCCcceeeeeeeEEECCeE
Confidence 57899999999999999999975 78999999876432 2233568889999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 881 ILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.++++|||.+.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccce
Confidence 999999999999998853 34589999999999999999999999 99999999999999999999999999988
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
....... ......++..|+|||...+..++.++||||+|+++|||++|+.||........++.........
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 225 (267)
T cd08228 155 FFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY-------- 225 (267)
T ss_pred eccchhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC--------
Confidence 7643221 1223467889999999988889999999999999999999999997654333333332211000
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
+ ..........+.+++.+|++.+|++||++.||++.++++.
T Consensus 226 ~-------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 226 P-------PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred C-------CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0 0012234467889999999999999999999999998763
No 110
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.7e-35 Score=324.99 Aligned_cols=255 Identities=25% Similarity=0.386 Sum_probs=201.8
Q ss_pred HcCCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
..++|++.+.||+|+||.||+|.++ .++.||||++..... ....++.+|+.+++. ++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~----l~~~~iv~~~~~~~ 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE----FNCHHVVRLLGVVS 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHh----CCCCCeeeEEEEEc
Confidence 3567999999999999999999853 246799999865422 234568889998886 67999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDRT----------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG 945 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~~----------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~ 945 (1088)
++...++||||+++|+|.++++... .+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 156 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCC
Confidence 9999999999999999999997532 357889999999999999999998 999999999999999999
Q ss_pred CEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhh
Q 001384 946 KALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRV 1023 (1088)
Q Consensus 946 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1088)
.++++|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... +.....
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~~~ 234 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLRFV 234 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 9999999998765432221 1122345778999999988899999999999999999999 78888765331 111111
Q ss_pred hccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1024 MGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.... ....+...+..+.+++.+|++.||++||++.|+++.|++
T Consensus 235 ~~~~----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 MEGG----------------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HcCC----------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1000 000112234578889999999999999999999999874
No 111
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-36 Score=327.39 Aligned_cols=258 Identities=26% Similarity=0.390 Sum_probs=217.1
Q ss_pred HcCCCCccceecccCceEEEEEEeCC-CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLPD-GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
...+.....+||-|.||.||.|.|+. .-.||||.++.+.. .-++|..|..+|+. ++|||+|+++|+|..+..+|
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKe----ikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKE----IKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHh----hcCccHHHHhhhhccCCCeE
Confidence 33455667899999999999999974 56799999987743 35689999999997 78999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDRTR--LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
||+|||..|+|.||+++..+ ++.--.+++|.||+.||+||..+ ++|||||.++|+|+.++..+||+|||+++.+.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 99999999999999987654 77778889999999999999999 99999999999999999999999999999987
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
......+....-++.|.|||.+....++.|+|||+|||+|||+.| |-.||.+-+- .+.+....
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl--SqVY~LLE-------------- 480 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYGLLE-------------- 480 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH--HHHHHHHh--------------
Confidence 655555555667889999999999999999999999999999998 6677776432 11111111
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
.+.+...+..|+..++++++.||+..|.+||+++||-+.||.++..
T Consensus 481 --kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 481 --KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred --ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 1122233667888999999999999999999999999999988754
No 112
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.8e-35 Score=328.95 Aligned_cols=241 Identities=30% Similarity=0.432 Sum_probs=193.6
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||+||+|++. +++.||||+++.... .....+..|..++... .+||||+++++++.+++..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~---~~hp~iv~~~~~~~~~~~~~lv~ey 77 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA---WEHPFLTHLYCTFQTKENLFFVMEY 77 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc---cCCCcCcceEEEEEeCCEEEEEEeC
Confidence 46999999999999976 578999999976421 2234456677777642 4899999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 153 (316)
T cd05619 78 LNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-KT 153 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-ce
Confidence 99999999998888899999999999999999999999 999999999999999999999999999875432221 22
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||..|+|||++.+..++.++||||+||++|||++|+.||.+..... ...... ... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~~~i~-~~~-----~~----------- 214 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--LFQSIR-MDN-----PC----------- 214 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--HHHHHH-hCC-----CC-----------
Confidence 34578999999999998899999999999999999999999998754311 111111 000 00
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCHH-HHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNVK-EVL 1077 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil 1077 (1088)
.+.....++.+++.+|++.||++||++. ++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0112234677889999999999999997 554
No 113
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.7e-35 Score=320.22 Aligned_cols=252 Identities=28% Similarity=0.442 Sum_probs=204.8
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.++|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++ ++|||++++++++. .+..++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~----l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQ----LQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHh----cCCcCeeeEEEEEc-cCCcEEE
Confidence 457889999999999999999988899999999886533 34678899999986 67999999999864 4568999
Q ss_pred EEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++++|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 9999999999998653 3689999999999999999999998 9999999999999999999999999999876533
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
.........++..|+|||+.....++.++||||||+++|||++ |+.||.+..... ....... ..
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~-~~------------ 220 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQNLER-GY------------ 220 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHHc-CC------------
Confidence 3222233445678999999988889999999999999999999 999997654311 1111110 00
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
..+.+...+.++.+++.+|++.+|++||++++++..|+.
T Consensus 221 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 221 ---RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 001112234578899999999999999999999999975
No 114
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4e-35 Score=331.01 Aligned_cols=255 Identities=27% Similarity=0.449 Sum_probs=203.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCc----EEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGR----EVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
.+|++.+.||+|+||.||+|++. +++ .||+|++.... ....+++..|+.+++. ++||||+++++++...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----l~h~niv~~~g~~~~~- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS----VDNPHVCRLLGICLTS- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHh----CCCCCCCeEEEEEcCC-
Confidence 46899999999999999999864 333 48999987543 2334678889998886 6899999999998765
Q ss_pred eEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 EKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..++|+||+++|+|.++++.. ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 567999999999999999764 4689999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 958 VSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 958 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
+....... .....++..|+|||.+....++.++||||||+++|||++ |+.||.+.... ++..... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~-~~~------- 228 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE-KGE------- 228 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHh-CCC-------
Confidence 65432221 122334678999999998899999999999999999998 99999765331 1111111 000
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
..+.+..+..++.+++.+|++.+|++||++.+++..+.++.+
T Consensus 229 --------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 229 --------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred --------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 001112233568889999999999999999999999998764
No 115
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.9e-35 Score=321.53 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=202.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++ ++||||+++++++..+...++|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~----~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKE----CKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHh----cCCCCeeeeeEEEEeCCEEEEE
Confidence 57999999999999999999974 688999999976543444567889999886 6899999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++++|.++++...++++.++..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI- 160 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc-
Confidence 99999999999998888899999999999999999999998 99999999999999999999999999998764321
Q ss_pred cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 964 HVSTTIAGTVGYVAPEYGQ---TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
.......++..|+|||.+. ...++.++||||+||++|||++|+.||......... ... .. ......
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--~~~---~~----~~~~~~-- 229 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--FLM---SK----SNFQPP-- 229 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh--eee---ec----CCCCCC--
Confidence 1123346788999999874 345788999999999999999999998654221000 000 00 000000
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
...........+.+++.+|++.+|++||+++++++.
T Consensus 230 ---~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 230 ---KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred ---CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 000112234678899999999999999999999864
No 116
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-35 Score=334.72 Aligned_cols=241 Identities=26% Similarity=0.305 Sum_probs=195.5
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|..+ +|+.||+|++.+.... ....+..|++++.. ++||||+++++++...+..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~----~~hp~i~~~~~~~~~~~~~~lv~E~ 76 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN----SRHPFLTALKYSFQTHDRLCFVMEY 76 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh----CCCCCCCceEEEEEcCCEEEEEEeC
Confidence 46999999999999965 6899999999764322 23456778888875 6799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHH-ECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
+++|+|.+++.....+++.++..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 77 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~ 152 (325)
T cd05594 77 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GAT 152 (325)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-Ccc
Confidence 9999999999888889999999999999999999997 6 9999999999999999999999999998754322 122
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 966 STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.....||..|+|||++.+..++.++||||+||++|||++|+.||.+.... +..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~~~~~----------------- 213 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI----------------- 213 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHHhcCCC-----------------
Confidence 23456899999999998889999999999999999999999999765431 11111110000
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
..+.....++.+++.+|++.||++|+ +++++++
T Consensus 214 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 00112335678899999999999997 8888874
No 117
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.3e-35 Score=335.15 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=202.2
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||+||+|+.+ +++.||+|+++.... ...+.+.+|+.++.. .+||||+++++++.++...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~----~~~~~i~~~~~~~~~~~~~ 76 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI----SNSPWIPQLQYAFQDKDNL 76 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh----CCCCCCcceeeEEecCCeE
Confidence 36889999999999999999976 689999999986532 233457788888876 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
++||||+++|+|.+++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 77 YLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred EEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 9999999999999999876 6799999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccccCccccC------CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQ------TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1088)
...........||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..............
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~~~~i~~~~~~~~-- 229 (330)
T cd05601 154 ANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA--KTYNNIMNFQRFLK-- 229 (330)
T ss_pred CCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH--HHHHHHHcCCCccC--
Confidence 43333334457899999999876 456789999999999999999999999865431 11222221111000
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. +........+.+++.+|++ +|.+||+++++++
T Consensus 230 --~---------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 230 --F---------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred --C---------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 0111234567788889998 9999999999874
No 118
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.9e-35 Score=333.62 Aligned_cols=240 Identities=25% Similarity=0.324 Sum_probs=192.4
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
++||+|+||.||+|+++ +++.||+|++++.... ....+..|..++... .+||||+++++++.++...|+||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~---~~hp~Iv~~~~~~~~~~~~~lv~e~ 77 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETA---SNHPFLVGLHSCFQTESRLFFVIEF 77 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc---cCCCCCCceEEEEEcCCEEEEEEeC
Confidence 46999999999999976 6889999999864322 224577888888763 2799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++....++++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 78 ~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~ 153 (329)
T cd05588 78 VSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTT 153 (329)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-CCcc
Confidence 99999999998888899999999999999999999999 9999999999999999999999999998753221 1223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch------hHHHHHHhhhccCCCCCCccccchhh
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE------CLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
....||..|+|||++.+..++.++||||+||++|||++|+.||..... ...++.....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~---------------- 217 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI---------------- 217 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH----------------
Confidence 346789999999999998999999999999999999999999963211 1111211111
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
.......+......+.+++.+|++.||.+||++
T Consensus 218 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 218 LEKQIRIPRSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred HcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 001111122234567889999999999999983
No 119
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3e-35 Score=333.25 Aligned_cols=240 Identities=25% Similarity=0.323 Sum_probs=191.9
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|+.+ +++.||+|++.+... .....+..|..++.+. .+||||+++++++..++..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~---~~hp~iv~~~~~~~~~~~~~lv~E~ 77 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA---SNHPFLVGLHSCFQTESRLFFVIEY 77 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhc---CCCCcCCceeeEEEeCCEEEEEEeC
Confidence 46999999999999976 678999999986432 2234567788877653 3799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++....++++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~~ 153 (329)
T cd05618 78 VNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTT 153 (329)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCcc
Confidence 99999999998888899999999999999999999999 9999999999999999999999999998753221 1223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch------hHHHHHHhhhccCCCCCCccccchhh
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE------CLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
....||..|+|||++.+..++.++||||+||++|||++|+.||..... ....+......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~--------------- 218 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--------------- 218 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh---------------
Confidence 346789999999999999999999999999999999999999963211 11112111110
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
......+......+.+++.+|++.||++||++
T Consensus 219 -~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 219 -EKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -cCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 00011122334567889999999999999984
No 120
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.2e-35 Score=329.55 Aligned_cols=241 Identities=30% Similarity=0.429 Sum_probs=193.8
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|+++ +|+.||+|++++... ........|..++... .+||||+++++++.+++..|+||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~---~~~~~i~~~~~~~~~~~~~~lv~E~ 77 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA---WENPFLTHLYCTFQTKEHLFFVMEF 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc---cCCCCccCeeEEEEeCCEEEEEECC
Confidence 46999999999999976 688999999976421 2234456677776542 4799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++....++++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 78 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (316)
T cd05620 78 LNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRA 153 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cce
Confidence 99999999998888899999999999999999999999 99999999999999999999999999987532221 223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||..|+|||++.+..++.++||||+||++|||++|+.||.+.... +....... .. . .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~-~~-----~-----------~ 214 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRV-DT-----P-----------H 214 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-CC-----C-----------C
Confidence 4467899999999999989999999999999999999999999865432 11111110 00 0 0
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCHH-HHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNVK-EVL 1077 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil 1077 (1088)
.+.....++.+++.+|++.||++||++. ++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0111234677889999999999999985 554
No 121
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.5e-35 Score=339.51 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=196.4
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+|+..+.||+|+||+||+|+.. +++.||+|++.+... .....+.+|+++++. ++||||+++++++.++...|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~----~~h~~iv~~~~~~~~~~~~~ 77 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE----ADNEWVVRLYYSFQDKDNLY 77 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh----CCCCcCCeEEEEEEeCCEEE
Confidence 5888999999999999999975 688999999976432 223467889999986 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++|+|.+++.+.+.+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++..+...
T Consensus 78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 78 FVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999999998888899999999999999999999999 9999999999999999999999999997533110
Q ss_pred C----------------------------------------------CcccccccccccccCccccCCCCCCcchhHHHH
Q 001384 962 D----------------------------------------------SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSF 995 (1088)
Q Consensus 962 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 995 (1088)
. ........||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 000123468999999999998899999999999
Q ss_pred HHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC---
Q 001384 996 GVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN--- 1072 (1088)
Q Consensus 996 G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs--- 1072 (1088)
||++|||++|+.||.+....... .....+..... .+ .......++.+++.+|+ .+|++|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~--~~i~~~~~~~~----~p---------~~~~~s~~~~~li~~l~-~~p~~R~~~~~ 298 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLETQ--MKVINWQTSLH----IP---------PQAKLSPEASDLIIKLC-RGPEDRLGKNG 298 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHH--HHHHccCCCcC----CC---------CcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence 99999999999999876442211 11111110000 00 01112345666676765 49999997
Q ss_pred HHHHHH
Q 001384 1073 VKEVLA 1078 (1088)
Q Consensus 1073 ~~eil~ 1078 (1088)
++|+++
T Consensus 299 ~~ei~~ 304 (382)
T cd05625 299 ADEIKA 304 (382)
T ss_pred HHHHhc
Confidence 777654
No 122
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.8e-35 Score=347.24 Aligned_cols=252 Identities=28% Similarity=0.356 Sum_probs=202.2
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC-
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS- 878 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~- 878 (1088)
..++|++.+.||+|+||+||+|++. +|+.||||++...... ....+.+|+.++.. ++|+|++++++.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~----~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN----CDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhc----CCCCcEEEeecceecccc
Confidence 3468999999999999999999965 6899999998765322 23467788888875 67999999988765432
Q ss_pred -------eEEEEEEecCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCE
Q 001384 879 -------EKILVYEYMEGGSLEDIISDR----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKA 947 (1088)
Q Consensus 879 -------~~~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~ 947 (1088)
..++||||+++|+|.++++.. ..+++..+..++.|++.||+|+|++ +|+||||||+||+++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCE
Confidence 367999999999999998653 4689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhcc
Q 001384 948 LVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+... .+........
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--~~~~~~~~~~ 260 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--EEVMHKTLAG 260 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhcC
Confidence 9999999987643221 223446799999999999998999999999999999999999999986532 2222222110
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
...+.+.....++.+++.+|++.||.+||++.++++.
T Consensus 261 ----------------~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 ----------------RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0011122344678889999999999999999999763
No 123
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.6e-35 Score=329.17 Aligned_cols=242 Identities=29% Similarity=0.382 Sum_probs=196.2
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||+||+|.++ +++.||||++++... .....+..|.+++.... +||||+++++++.+.+..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~---~h~~i~~~~~~~~~~~~~~lv~e~ 77 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG---KHPFLTQLHSCFQTKDRLFFVMEY 77 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc---CCCCccceeeEEEcCCEEEEEEcC
Confidence 46999999999999976 578999999986432 22345667888877532 799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.+..++++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++...... ...
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (318)
T cd05570 78 VNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTT 153 (318)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Ccc
Confidence 99999999998888899999999999999999999999 99999999999999999999999999987532221 222
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....|+..|+|||++.+..++.++||||+||++|+|++|+.||.+.... +......... ..
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--~~~~~i~~~~-----------------~~ 214 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--ELFQSILEDE-----------------VR 214 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--HHHHHHHcCC-----------------CC
Confidence 3456899999999999999999999999999999999999999865431 1111111000 00
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCH-----HHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNV-----KEVLA 1078 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~ 1078 (1088)
.+......+.+++.+|++.||.+||++ .++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 112234567889999999999999999 77654
No 124
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.5e-35 Score=323.14 Aligned_cols=252 Identities=25% Similarity=0.413 Sum_probs=201.8
Q ss_pred CCCCccceecccCceEEEEEEe-----CCCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVL-----PDGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
.+|++.+.||+|+||+||+|.. ..++.||+|.+..... .....+.+|++++++ ++||||+++++++..+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAE----LHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhh----CCCCCeeeEEEEEecCC
Confidence 3578889999999999999984 2457899999975432 233578889999987 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 001384 879 EKILVYEYMEGGSLEDIISDR-----------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLL 941 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~-----------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll 941 (1088)
..++||||+++++|.+++... ..+++.++..++.|++.||+|||++ +++||||||+||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili 157 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILI 157 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEE
Confidence 999999999999999998532 2378899999999999999999999 99999999999999
Q ss_pred cCCCCEEEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCch-hHHH
Q 001384 942 DKEGKALVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEE-CLVE 1018 (1088)
Q Consensus 942 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~-~~~~ 1018 (1088)
++++.+|++|||+++....... .......++..|+|||+..+..++.++||||||+++|||++ |..||.+... ...+
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05090 158 GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE 237 (283)
T ss_pred cCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999999987543221 12233445678999999988889999999999999999998 8889876543 1222
Q ss_pred HHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1019 WGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
...... ..+.+...+.++.+++.+|+++||++||++.+|.+.|.+
T Consensus 238 ~~~~~~-------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQ-------------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCC-------------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 211100 001122234578889999999999999999999998864
No 125
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.6e-35 Score=339.72 Aligned_cols=251 Identities=23% Similarity=0.304 Sum_probs=198.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|+.. +++.||||++.+... .....+.+|++++.+ +.||||+++++++.+++..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~----l~h~~iv~~~~~~~~~~~~ 76 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE----ADNEWVVKLYYSFQDKDNL 76 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHh----CCCCCcceEEEEEEcCCEE
Confidence 36899999999999999999975 689999999875422 233567889999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++|+|.+++.+.+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|..+..
T Consensus 77 ~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 77 YFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999999998888899999999999999999999999 999999999999999999999999999753310
Q ss_pred CC------------------------------------------CcccccccccccccCccccCCCCCCcchhHHHHHHH
Q 001384 961 GD------------------------------------------SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVL 998 (1088)
Q Consensus 961 ~~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~ 998 (1088)
.. ........||+.|+|||++.+..++.++||||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 00 000123468999999999999899999999999999
Q ss_pred HHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCC---CHHH
Q 001384 999 AMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARP---NVKE 1075 (1088)
Q Consensus 999 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~e 1075 (1088)
+|||++|+.||.+..... +......+.... ..+ ........+.+++.+|+ .+|.+|+ ++.|
T Consensus 234 lyell~G~~Pf~~~~~~~--~~~~i~~~~~~~----~~~---------~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 234 LYEMLVGQPPFLADTPAE--TQLKVINWETTL----HIP---------SQAKLSREASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred eeehhhCCCCCCCCCHHH--HHHHHhccCccc----cCC---------CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 999999999998765421 111111111100 000 01112345666777776 5999999 8888
Q ss_pred HHH
Q 001384 1076 VLA 1078 (1088)
Q Consensus 1076 il~ 1078 (1088)
+++
T Consensus 298 ll~ 300 (376)
T cd05598 298 IKA 300 (376)
T ss_pred HhC
Confidence 864
No 126
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1e-34 Score=322.59 Aligned_cols=268 Identities=27% Similarity=0.380 Sum_probs=204.2
Q ss_pred CC-CccceecccCceEEEEEEe-----CCCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC-
Q 001384 806 KF-SEDRIIGKGGFGTVYRGVL-----PDGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG- 877 (1088)
Q Consensus 806 ~~-~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~- 877 (1088)
+| +..+.||+|+||+||++.. .+++.||+|.+..... .....+.+|+++++. ++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~ 79 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKT----LYHENIVKYKGCCSEQG 79 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHh----CCCCCEeeEEEEEecCC
Confidence 44 8889999999999988653 3577899999976532 234678899999986 6799999999987653
Q ss_pred -CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 -SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++||||+++++|.+++... .+++.+++.++.|++.|++|||+. +|+||||||+||++++++.++++|||+++
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccc
Confidence 4678999999999999999764 599999999999999999999999 99999999999999999999999999998
Q ss_pred eecCCCCc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 957 VVSAGDSH--VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
........ ......++..|+|||......++.++||||||+++|||++|..||........+....... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~ 232 (283)
T cd05080 156 AVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG---QMTVVR 232 (283)
T ss_pred ccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc---ccchhh
Confidence 76432221 1122345667999999988889999999999999999999999987543321111110000 000000
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+....+...+.+...+..+.+++.+|++.+|++||++++|++.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00001111111223344568899999999999999999999999999875
No 127
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=9.8e-35 Score=322.87 Aligned_cols=269 Identities=28% Similarity=0.367 Sum_probs=204.1
Q ss_pred CCCCccceecccCceEEEEEEe-----CCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec--C
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVL-----PDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD--G 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~--~ 877 (1088)
.+|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++ ++||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKS----LQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHh----CCCCCeeEEEEEEccCCC
Confidence 4688899999999999999974 2578999999987654555678899999987 679999999998754 3
Q ss_pred CeEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 SEKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccc
Confidence 4688999999999999999764 4689999999999999999999999 99999999999999999999999999998
Q ss_pred eecCCCCcc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC-c
Q 001384 957 VVSAGDSHV--STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG-R 1033 (1088)
Q Consensus 957 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 1033 (1088)
......... .....++..|+|||+..+..++.++||||||+++|||++|..++...... +............. .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVY 233 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchH
Confidence 764332211 11223345699999998889999999999999999999998876543221 11111000000000 0
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
...+........+.+...+..+.+++.+|++.+|++||++.||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000001111112233456788999999999999999999999999976
No 128
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-34 Score=317.09 Aligned_cols=251 Identities=26% Similarity=0.381 Sum_probs=202.3
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
++|++.+.||+|++|.||+|.+..+..+|+|++.... ...+.+.+|++++++ +.|||++++++++. ....++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKK----LRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHh----CCCCCeeeEEEEEc-CCCcEEEE
Confidence 4688889999999999999998777789999887543 334678899999986 67999999999875 45678999
Q ss_pred EecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 885 EYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||+++|+|.++++... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999997643 489999999999999999999998 99999999999999999999999999998764332
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
........++..|+|||...+..++.++||||+|+++|||++ |+.||.+..... ..........
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~------------- 221 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGYR------------- 221 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC-------------
Confidence 222223345678999999988899999999999999999999 899997654311 1111110000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
...+...+..+.+++.+|++.||++||++++|++.|++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 ---MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01122334678889999999999999999999999985
No 129
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=9.3e-35 Score=316.97 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=196.9
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
+.||+|+||.||+|.++ +++.||+|.+.... ......+.+|++++++ +.||||+++++++......++||||++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv~e~~~ 76 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQ----YSHPNIVRLIGVCTQKQPIYIVMELVQ 76 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHh----CCCCCcceEEEEEcCCCCeEEEEeecc
Confidence 46999999999999975 68899999887543 2334578899999886 679999999999999999999999999
Q ss_pred CCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc-c
Q 001384 889 GGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV-S 966 (1088)
Q Consensus 889 ~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~ 966 (1088)
+++|.+++.... .+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||++.......... .
T Consensus 77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 999999997644 589999999999999999999999 99999999999999999999999999987543221111 1
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.....+..|+|||.+.+..++.++||||+|+++|||++ |..||........ ...... . ...
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~--~~~~~~-~---------------~~~ 215 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT--REAIEQ-G---------------VRL 215 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH--HHHHHc-C---------------CCC
Confidence 11123457999999988899999999999999999998 8888865433111 111110 0 000
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
..+...+..+.+++.+|++.+|++||++.|+.++|++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 216 PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 1122334578889999999999999999999999863
No 130
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.3e-35 Score=335.88 Aligned_cols=247 Identities=27% Similarity=0.403 Sum_probs=193.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
+|+..+.||+|+||.||+|++. +++.||||++..... .....+.+|+++++. ++|+||+++++++...+..++|
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD----VNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHh----CCCCCcceeeeEeccCCeEEEE
Confidence 4566789999999999999975 689999999875432 234578899999986 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++|+|.+. ...++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 999999998653 2456788899999999999999999 99999999999999999999999999998764321
Q ss_pred cccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 964 HVSTTIAGTVGYVAPEYGQT-----WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||..... .+|.........
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~---------- 290 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICM---------- 290 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhc----------
Confidence 12234578999999998743 2345689999999999999999999974322 112111110000
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
......+.....++.+++.+||+.||++||++.|+++.
T Consensus 291 ---~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 291 ---SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ---cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011122344678899999999999999999999863
No 131
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.7e-35 Score=318.64 Aligned_cols=253 Identities=28% Similarity=0.441 Sum_probs=206.5
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.++|++.+.||+|+||.||+|.+++++.||||.+.... ...+++.+|+.++++ ++|||++++++++......++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKK----LRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhh----CCCCCEeeeeeeeecCCceEEE
Confidence 46789999999999999999998878899999988653 345678999999987 6799999999999988999999
Q ss_pred EEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++++|.+++.... .+++.++..++.|++.|++|||+. +++|+||||+||++++++.+|++|||.++.....
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999997643 689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
..........+..|+|||...+..++.++||||+|+++|+|++ |+.||.+.... .........
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~-------------- 220 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERG-------------- 220 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC--------------
Confidence 2222222334568999999988889999999999999999998 99999765331 111111100
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
...+.+...+.++.+++.+|++.+|++||+++++++.|+.
T Consensus 221 --~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 221 --YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0001112224578889999999999999999999999875
No 132
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6e-35 Score=337.86 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=198.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|... +++.||||++.+... ...+.+.+|++++.. ++||||+++++++.++...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~----l~hp~iv~~~~~~~~~~~~ 76 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE----SDSPWVVSLYYSFQDAQYL 76 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHh----CCCCCcceEEEEEEcCCee
Confidence 46889999999999999999975 689999999875421 223467889999886 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+||||+++|+|.+++.....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 77 YLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999999998888899999999999999999999999 999999999999999999999999999864321
Q ss_pred CCCc----------------------------------------------ccccccccccccCccccCCCCCCcchhHHH
Q 001384 961 GDSH----------------------------------------------VSTTIAGTVGYVAPEYGQTWQATTKGDVYS 994 (1088)
Q Consensus 961 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws 994 (1088)
.... ......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 001246899999999998889999999999
Q ss_pred HHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCC---C
Q 001384 995 FGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNAR---P 1071 (1088)
Q Consensus 995 lG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---P 1071 (1088)
+||++|||++|..||.+..... ....+..+..... ++ .......++.+++.+|++ +|.+| +
T Consensus 234 lGvil~elltG~~Pf~~~~~~~--~~~~i~~~~~~~~----~p---------~~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHE--TYRKIINWRETLY----FP---------DDIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHH--HHHHHHccCCccC----CC---------CCCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 9999999999999998654311 1111211111000 00 011123467788889997 66665 5
Q ss_pred CHHHHHH
Q 001384 1072 NVKEVLA 1078 (1088)
Q Consensus 1072 s~~eil~ 1078 (1088)
++.|+++
T Consensus 298 ~~~~~l~ 304 (377)
T cd05629 298 GAHEIKS 304 (377)
T ss_pred CHHHHhc
Confidence 8988875
No 133
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.7e-35 Score=323.12 Aligned_cols=241 Identities=27% Similarity=0.337 Sum_probs=193.4
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|+||+||+|.++ +++.||+|++....... .+.+..|+++++. ++||||+++.+++..+...++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~----l~~~~i~~~~~~~~~~~~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAK----VHSRFIVSLAYAFQTKTDLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHh----CCCCcEeeeeEEEcCCCeEEEEEeCCC
Confidence 699999999999976 68899999987643222 2456778888886 689999999999999999999999999
Q ss_pred CCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 889 GGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 889 ~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+........
T Consensus 77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~- 152 (280)
T cd05608 77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS- 152 (280)
T ss_pred CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-
Confidence 9999988743 34689999999999999999999999 999999999999999999999999999987643322
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhhccCCCCCCccccchhhcC
Q 001384 965 VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... ..+.......
T Consensus 153 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----------------- 215 (280)
T cd05608 153 KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN----------------- 215 (280)
T ss_pred cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc-----------------
Confidence 223457899999999999999999999999999999999999999764321 1111111110
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
.....+......+.+++.+|++.||++|| +++++++
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 216 DSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 00011223446788899999999999999 6677764
No 134
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3e-34 Score=315.14 Aligned_cols=251 Identities=25% Similarity=0.361 Sum_probs=204.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc-----chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE-----GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
++|++.+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|++++++ ++||||+++++++.++.
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~ 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKN----LQHERIVQYYGCLRDDE 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHh----CCCCCeeeeEEEEccCC
Confidence 46889999999999999999965 6899999998754221 12467889998886 68999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 879 EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
..++||||+++++|.+++.....+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++..
T Consensus 78 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred eEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999999999998888899999999999999999999999 9999999999999999999999999999765
Q ss_pred cCCCCccc--ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 959 SAGDSHVS--TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 959 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
........ ....++..|+|||...+..++.++||||+|+++|||++|+.||.........+ ....... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~----~--- 225 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIF--KIATQPT----N--- 225 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHH--HHhccCC----C---
Confidence 43222111 23457789999999998889999999999999999999999997653321111 1110000 0
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
...+......+.+++.+|++.+|.+||++.|+++.
T Consensus 226 --------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 --------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 01122334568889999999999999999999864
No 135
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.9e-34 Score=317.44 Aligned_cols=257 Identities=25% Similarity=0.430 Sum_probs=208.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|... +++.+|||.+..... ....++.+|+++++. ++||||+++++++.+++..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~~ 77 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ----LNHPNVIKYYASFIEDNEL 77 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHH----ccCCchhhhhheeEeCCeE
Confidence 46888899999999999999964 789999998865322 223578889999886 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 881 ILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
++||||+++++|.++++. ...+++.+++.++.|++.|++|||++ +++|+||||+||+++.++.++++|||++.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 999999999999998864 34589999999999999999999999 99999999999999999999999999987
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
....... ......++..|+|||...+..++.++||||||+++|+|++|..||.+......++.........
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 225 (267)
T cd08229 155 FFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY-------- 225 (267)
T ss_pred ccccCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCC--------
Confidence 6543221 2233468889999999988889999999999999999999999997654332222222210000
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
+ ..........+.+++.+|++.||++||++.+|+++++++.
T Consensus 226 ~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 P-------PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C-------CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 0011234567889999999999999999999999999875
No 136
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.3e-35 Score=334.62 Aligned_cols=254 Identities=24% Similarity=0.302 Sum_probs=199.1
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
..++|++.+.||+|+||.||+|+.+ +++.||+|++.+... .....+.+|+.+++. ++||||+++++++.++.
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~----~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----ANSPWVVQLFCAFQDDK 116 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh----CCCCCEeeEEEEEEcCC
Confidence 3467999999999999999999976 578999999875321 223457788888886 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 879 EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
..|+||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||++...
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 999999999999999999654 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccccCccccCCC----CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTW----QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
............||+.|+|||++... .++.++||||+||++|||++|+.||.+.... .....+........
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--~~~~~i~~~~~~~~--- 267 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--GTYSKIMDHKNSLN--- 267 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCcccC---
Confidence 54333333456799999999987653 3788999999999999999999999865431 11122211000000
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCC--CCCHHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNA--RPNVKEVLAM 1079 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~ 1079 (1088)
.+ ........+.+++.+|++.+|.+ ||++.|+++.
T Consensus 268 -~p---------~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 -FP---------EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -CC---------CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00 01122355677888999855544 8899998763
No 137
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.2e-35 Score=324.32 Aligned_cols=247 Identities=30% Similarity=0.371 Sum_probs=199.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.|++.++||+|+||+||++... +++.||||++...... ....+.+|+.+++. ++||||+++++++..++..+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~ 76 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK----VNSRFVVSLAYAYETKDALC 76 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHh----cCCCCEeeeeeeecCCCeEE
Confidence 4788899999999999999975 6899999998754322 23456789999986 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
+||||+++|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 77 LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 999999999999988653 3589999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH--HHHHhhhccCCCCCCccccc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLV--EWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
... ......|+..|+|||++.+..++.++||||+|+++|||++|+.||.+...... +......
T Consensus 154 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~------------- 218 (285)
T cd05605 154 EGE--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVK------------- 218 (285)
T ss_pred CCC--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhh-------------
Confidence 322 12234688999999999888999999999999999999999999986543111 1111111
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
......+......+.+++.+|++.||++|| +++++++
T Consensus 219 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 219 ----EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ----hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 000111223456788899999999999999 7888754
No 138
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=7.1e-35 Score=325.98 Aligned_cols=255 Identities=29% Similarity=0.429 Sum_probs=201.1
Q ss_pred CCCCccceecccCceEEEEEEeCC-Cc--EEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD-GR--EVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|.+++ +. .+++|.++... ....+.+.+|++++.++. +||||+++++++.+....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~---~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG---HHPNIINLLGACENRGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc---CCCchhheEEEEccCCcc
Confidence 578899999999999999999753 33 47888887432 223456888999988632 699999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC
Q 001384 881 ILVYEYMEGGSLEDIISDRT----------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE 944 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~ 944 (1088)
++||||+++|+|.++++... .+++..++.++.|++.|++|||+. +|+||||||+||+++++
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGEN 155 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCC
Confidence 99999999999999996532 478899999999999999999998 99999999999999999
Q ss_pred CCEEEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhh
Q 001384 945 GKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRV 1023 (1088)
Q Consensus 945 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1088)
+.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |+.||...... +.....
T Consensus 156 ~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~--~~~~~~ 231 (297)
T cd05089 156 LASKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA--ELYEKL 231 (297)
T ss_pred CeEEECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 99999999998643211 11112233567999999988889999999999999999997 99999765431 111111
Q ss_pred hccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1024 MGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.. +.....+......+.+++.+|++.+|.+||+++++++.|+++..
T Consensus 232 ~~----------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 232 PQ----------------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred hc----------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 10 00001122234578899999999999999999999999998764
No 139
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.4e-35 Score=334.24 Aligned_cols=252 Identities=24% Similarity=0.291 Sum_probs=200.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.+... .....+..|+.+++. ++||||+++++++.++..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~----~~h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH----ANSEWIVQLHYAFQDDKY 117 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh----CCCCCcceEEEEEecCCE
Confidence 357899999999999999999976 688999999975321 223457788998886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.++||||+++|+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999999998664 589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCccccCCC----CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTW----QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
...........||+.|+|||++... .++.++||||+||++|||++|+.||.+.... .....+....... .
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~~~----~ 267 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMDHKNSL----T 267 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--HHHHHHHcCCCcC----C
Confidence 3332233456799999999987643 4789999999999999999999999875431 1111121100000 0
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCC--CCCHHHHHH
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNA--RPNVKEVLA 1078 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~ 1078 (1088)
.+ ........+.+++.+|++.+|.+ ||+++|+++
T Consensus 268 ~~---------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 268 FP---------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CC---------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 00 01123457788899999999988 999999965
No 140
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-34 Score=317.20 Aligned_cols=247 Identities=27% Similarity=0.384 Sum_probs=198.2
Q ss_pred eecccCceEEEEEEeC---CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 812 IIGKGGFGTVYRGVLP---DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
.||+|+||.||+|.++ +++.+|+|+++.... ...+++..|+.+++. +.||||+++++++. ....++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~-~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQ----LDNPYIVRMIGICE-AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHh----CCCCCcceEEEEEc-CCCcEEEEec
Confidence 5899999999999753 578899999875432 234578889999886 67999999999875 4567899999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc-
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV- 965 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~- 965 (1088)
+++|+|.+++.....+++..+..++.|++.|++|+|++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 77 AELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999999998878899999999999999999999999 99999999999999999999999999998764333211
Q ss_pred -cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 966 -STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 966 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
.....++..|+|||......++.++||||||+++|||++ |+.||...... ++........
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~~---------------- 215 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESGE---------------- 215 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCC----------------
Confidence 122234578999999888889999999999999999998 99999865432 2222221100
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+.+...+.++.+++.+|++.||++||++++|++.|++.+
T Consensus 216 ~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05116 216 RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence 00112234467889999999999999999999999998753
No 141
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.9e-35 Score=328.70 Aligned_cols=242 Identities=25% Similarity=0.330 Sum_probs=195.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+|+..+.||+|+||+||+|+.+ +|+.||+|++.+... ...+.+..|..++... .+|++|+++++++.+.+..|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~---~~~~~i~~~~~~~~~~~~~~ 77 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQ---DKPPFLTQLHSCFQTVDRLY 77 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc---cCCCchhheeeEEecCCEEE
Confidence 3677899999999999999975 688999999976422 2224566777777653 25788899999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++|+|.+++.....+++.+++.++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 78 lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 78 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999999998888899999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
........||..|+|||++.+..++.++||||+||++|||++|+.||.+..... ....+.....
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~~~i~~~~~------------- 218 (323)
T cd05615 155 -GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--LFQSIMEHNV------------- 218 (323)
T ss_pred -CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCC-------------
Confidence 122334568999999999988899999999999999999999999998764421 1111211000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
..+.....++.+++.+|++.+|.+|++.
T Consensus 219 ----~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 ----SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0011233567889999999999999975
No 142
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.8e-35 Score=321.99 Aligned_cols=253 Identities=27% Similarity=0.418 Sum_probs=203.1
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
.+|...+.||+|+||.||+|... ++..+|+|.+..........+.+|+++++. ++|+||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTV----LQHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhc----CCCCCCceEEEEEecCC
Confidence 45777899999999999999742 356799999886655556689999999986 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC
Q 001384 879 EKILVYEYMEGGSLEDIISDRT---------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK 943 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~---------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~ 943 (1088)
..++||||+++|+|.+++.... .+++..++.++.|++.|++|||+. +++||||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 9999999999999999997643 478999999999999999999998 9999999999999999
Q ss_pred CCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHH
Q 001384 944 EGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGR 1021 (1088)
Q Consensus 944 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~ 1021 (1088)
++.+||+|||++......... ......++..|+|||...+..++.++|||||||++|||++ |..||....+... ..
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~ 235 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA--IE 235 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH--HH
Confidence 999999999999765432211 1222345678999999988899999999999999999998 8999876433111 11
Q ss_pred hhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1022 RVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.... .. ....+...+..+.+++.+|++.||.+||++.||++.|++
T Consensus 236 ~~~~-~~---------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 236 CITQ-GR---------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHc-Cc---------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1110 00 001112234568899999999999999999999999874
No 143
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-34 Score=322.62 Aligned_cols=255 Identities=28% Similarity=0.424 Sum_probs=203.9
Q ss_pred CCCccceecccCceEEEEEEeC------CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
+|++.+.||+|+||.||+|... ....+|+|.+...... ...++.+|+.+++. +.||||+++++++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~ 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQ----VNHPHVIKLYGACSQDG 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhh----CCCCCEeeEEEEEecCC
Confidence 4788899999999999999853 2357889988765322 23568889999986 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 001384 879 EKILVYEYMEGGSLEDIISDR------------------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDV 934 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DL 934 (1088)
..++||||+++|+|.+++... ..+++.+++.++.|++.|++|||+. +++||||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~di 153 (290)
T cd05045 77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDL 153 (290)
T ss_pred CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhh
Confidence 999999999999999998642 2478899999999999999999998 9999999
Q ss_pred CCCCEEEcCCCCEEEeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCC
Q 001384 935 KASNVLLDKEGKALVTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGG 1012 (1088)
Q Consensus 935 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~ 1012 (1088)
||+||++++++.+||+|||+++......... .....++..|+|||...+..++.++||||||+++|||++ |..||.+.
T Consensus 154 kp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred hhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999997654332221 222345678999999888889999999999999999998 99999765
Q ss_pred chh-HHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1013 EEC-LVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1013 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
... ..++..... ....+.....++.+++.+|++.+|++||+++|+++.|++++..
T Consensus 234 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 234 APERLFNLLKTGY-------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CHHHHHHHHhCCC-------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 431 111111100 0001222345788999999999999999999999999998753
No 144
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=331.29 Aligned_cols=253 Identities=27% Similarity=0.458 Sum_probs=216.7
Q ss_pred CCccceecccCceEEEEEEeC-CC----cEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DG----REVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.+..++||+|+||+||+|.+- +| -+||+|++.... .+...++.+|+-+|.+ ++|||+++++++|.... .
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~mas----ldHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMAS----LDHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhc----CCCchHHHHhhhcccch-H
Confidence 445689999999999999963 44 369999988754 3445789999999986 78999999999998766 7
Q ss_pred EEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.||++||+.|+|.|+++.+ +++..+..+.|..|||+||.|||++ .+|||||.++||||.+-.++||+|||+|+...
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 8999999999999999764 4789999999999999999999999 99999999999999999999999999999877
Q ss_pred CCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 960 AGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 960 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
..+... .....-.+.|||-|.+....|+.++|||||||.+||++| |..|+++. ..+++.+
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi------------------~~~eI~d 911 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI------------------PAEEIPD 911 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC------------------CHHHhhH
Confidence 654333 233445678999999999999999999999999999888 99998874 2344455
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
..-.+.+++.|+.+..+++.++.+||..|+..||+++++...+.+..+
T Consensus 912 lle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 912 LLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 555667788899999999999999999999999999999999987643
No 145
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.1e-34 Score=348.28 Aligned_cols=258 Identities=26% Similarity=0.401 Sum_probs=204.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.++||+|+||.||+|.+. +|+.||+|++..... ...+++.+|++++++ ++||||+++++++.+++..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~----L~HPNIVkl~~v~~d~~~l 77 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAAD----LIHPGIVPVYSICSDGDPV 77 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHh----CCCcCcCeEEEEEeeCCEE
Confidence 57999999999999999999976 589999999976422 224568899999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhc-----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEE
Q 001384 881 ILVYEYMEGGSLEDIISDR-----------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALV 949 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~-----------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl 949 (1088)
++||||++||+|.++++.. ...++..+++++.||+.||+|||++ +|+||||||+||+++.++.++|
T Consensus 78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKL 154 (932)
T PRK13184 78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVI 154 (932)
T ss_pred EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEE
Confidence 9999999999999998641 2356778899999999999999999 9999999999999999999999
Q ss_pred eecccceeecCCCC-----------------cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCC
Q 001384 950 TDFGLARVVSAGDS-----------------HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGG 1012 (1088)
Q Consensus 950 ~Dfg~a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~ 1012 (1088)
+|||+++....... .......||+.|+|||++.+..++.++||||+||++|||+||+.||...
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 99999987621110 0112346899999999999999999999999999999999999999764
Q ss_pred chhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCC-CHHHHHHHHHhhCC
Q 001384 1013 EECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARP-NVKEVLAMLIKILP 1085 (1088)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~eil~~L~~i~~ 1085 (1088)
......+..... ..... ......+..+.+++.+|++.||++|| +++++.+.|+..+.
T Consensus 235 ~~~ki~~~~~i~------~P~~~----------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 235 KGRKISYRDVIL------SPIEV----------APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred chhhhhhhhhcc------Chhhc----------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 332111111100 00000 00112345678899999999999996 67778888887654
No 146
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.7e-34 Score=315.77 Aligned_cols=248 Identities=34% Similarity=0.475 Sum_probs=204.9
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
++|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.+++. ++|+|++++++++.+....++||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTT----LRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHh----cCCcceeeeEEEEcCCCCeEEEE
Confidence 46888999999999999999975 88999999987643 45678899999986 67999999999999999999999
Q ss_pred EecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 885 EYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||+++++|.++++... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 9999999999997765 689999999999999999999999 99999999999999999999999999998663221
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
.....+..|+|||......++.++||||+|+++|||++ |..||........ ...... ..
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~-~~------------- 216 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPHVEK-GY------------- 216 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHHHhc-CC-------------
Confidence 12334668999999988889999999999999999997 9999876533111 111110 00
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
....+...+..+.+++.+|++.+|++||++.|++++|+++
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 217 --RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0001122346788899999999999999999999999864
No 147
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.3e-35 Score=330.01 Aligned_cols=241 Identities=25% Similarity=0.316 Sum_probs=192.8
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||+||+|+.. +++.||+|++.+.... ..+.+..|..++.+. .+||+|+++++++.+....++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQA---SSNPFLVGLHSCFQTTSRLFLVIEY 77 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhh---cCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 46999999999999975 5789999999865322 224577888887763 2799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++.....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~ 153 (327)
T cd05617 78 VNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTT 153 (327)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCce
Confidence 99999999998888899999999999999999999999 9999999999999999999999999998753221 1223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch----hHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE----CLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...++...... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~----------------~ 217 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL----------------E 217 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH----------------h
Confidence 346789999999999998999999999999999999999999964211 11111111110 0
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVK 1074 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1074 (1088)
.....+......+.+++.+|++.||++|+++.
T Consensus 218 ~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 218 KPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 01111222335678899999999999999853
No 148
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-34 Score=334.46 Aligned_cols=258 Identities=27% Similarity=0.399 Sum_probs=203.6
Q ss_pred cCCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCccc-hHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLEG-EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
.++|.+.+.||+|+||.||+|+++ .++.||+|++....... .+.+..|++++.++. .||||+++++++..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~---~H~niv~~~~~~~~ 112 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG---PHLNIVNLLGACTK 112 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC---CCCCeEEEEEEEcc
Confidence 346778899999999999999853 34689999998653222 346888999998732 39999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcC--------------------------------------------------------
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRT-------------------------------------------------------- 900 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~-------------------------------------------------------- 900 (1088)
.+..++||||+++|+|.+++++..
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 999999999999999999996531
Q ss_pred ------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 001384 901 ------------------------------------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASN 938 (1088)
Q Consensus 901 ------------------------------------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~N 938 (1088)
.+++.+++.++.|++.||+|||+. +++||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcce
Confidence 257778899999999999999998 99999999999
Q ss_pred EEEcCCCCEEEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhH
Q 001384 939 VLLDKEGKALVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECL 1016 (1088)
Q Consensus 939 Ill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 1016 (1088)
|++++++.+|++|||+++....... .......++..|+|||.+....++.++||||||+++|||++ |+.||.......
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 9999999999999999986533221 11223456788999999988889999999999999999998 889987543211
Q ss_pred HHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1017 VEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+ ..... .. ....+.....++.+++.+|++.+|.+||+++||++.|++++
T Consensus 350 ~~~-~~~~~-~~---------------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 QFY-NAIKR-GY---------------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHH-HHHHc-CC---------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111 11110 00 00112223467889999999999999999999999999886
No 149
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.6e-34 Score=319.07 Aligned_cols=253 Identities=28% Similarity=0.475 Sum_probs=200.7
Q ss_pred CCccceecccCceEEEEEEeCC----CcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe-
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPD----GREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE- 879 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~- 879 (1088)
|.+.+.||+|+||.||+|.+.. +..||+|+++..... ....+..|++.++. ++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~ 76 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKD----FDHPNVMKLIGVCFEASSL 76 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHh----CCCCCeeeEEeeeccCCcc
Confidence 5678899999999999998642 367999998764322 23568889998886 679999999998876554
Q ss_pred -----EEEEEEecCCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEE
Q 001384 880 -----KILVYEYMEGGSLEDIISDR------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKAL 948 (1088)
Q Consensus 880 -----~~lv~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~k 948 (1088)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 77 ~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~k 153 (273)
T cd05035 77 QKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVC 153 (273)
T ss_pred ccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEE
Confidence 78999999999999988442 3589999999999999999999999 999999999999999999999
Q ss_pred EeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhcc
Q 001384 949 VTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 949 l~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
|+|||.++.+....... .....++..|+|||......++.++||||||+++|||++ |..||.+.... +.......
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~- 230 (273)
T cd05035 154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRH- 230 (273)
T ss_pred ECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc-
Confidence 99999998765433221 122335678999999988899999999999999999999 88888764331 12111110
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
+.....+......+.+++.+|++.||.+||++.|+++.|++++
T Consensus 231 ---------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 231 ---------------GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred ---------------CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 0001112234467889999999999999999999999999864
No 150
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.4e-35 Score=331.50 Aligned_cols=238 Identities=27% Similarity=0.335 Sum_probs=190.8
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||+||+|+++ +|+.||+|++.+.... ...++..|...+.+ .++||||+++++++.+++..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~---~l~hp~iv~~~~~~~~~~~~~lv~e~ 77 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLK---NVKHPFLVGLHYSFQTADKLYFVLDY 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHh---hCCCCCCCCeeEEEEeCCEEEEEEcC
Confidence 46999999999999976 6899999999754221 22344555544322 26899999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.++++....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~ 153 (323)
T cd05575 78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTT 153 (323)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcc
Confidence 99999999998888899999999999999999999999 9999999999999999999999999998753222 1223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~-----------------~ 214 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--AEMYDNILNKPL-----------------R 214 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--HHHHHHHHcCCC-----------------C
Confidence 345789999999999998999999999999999999999999986543 122222221000 0
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNVK 1074 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1074 (1088)
.+......+.+++.+|++.||.+||++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0112245678899999999999999985
No 151
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2e-34 Score=317.49 Aligned_cols=255 Identities=25% Similarity=0.425 Sum_probs=204.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CC---cEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DG---REVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
.+|+..+.||+|+||.||+|+++ ++ ..+|+|++.... ....+++..|++++.+ ++|||++++.+++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQ----FSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhc----CCCCCeeEEEEEEccCCC
Confidence 36778899999999999999975 33 379999987552 2334578889998886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.++||||+++++|.++++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 99999999999999999764 5789999999999999999999999 9999999999999999999999999999866
Q ss_pred cCCCCcccc--cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 959 SAGDSHVST--TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 959 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
......... ....+..|+|||++....++.++||||||+++|||++ |+.||..... .++........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~~~~-------- 227 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAINDGF-------- 227 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhcCC--------
Confidence 432221111 1223457999999988889999999999999999997 9999976433 12222221000
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+.+...+.++.+++.+|++.+|++||++.+|++.|++++
T Consensus 228 --------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 228 --------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 00112223467889999999999999999999999999874
No 152
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.5e-35 Score=327.09 Aligned_cols=255 Identities=30% Similarity=0.451 Sum_probs=200.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCc--EEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGR--EVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|.++ ++. .+|+|++.... ......+.+|++++.++. +||||+++++++..++..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~---~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG---HHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc---CCCCcceEEEEECCCCCc
Confidence 46888899999999999999975 454 46777776432 223457888999988732 799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC
Q 001384 881 ILVYEYMEGGSLEDIISDRT----------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE 944 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~ 944 (1088)
++||||+++|+|.++++... .+++.+++.++.|++.|++|||+. +++||||||+||+++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 99999999999999997542 478999999999999999999998 99999999999999999
Q ss_pred CCEEEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhh
Q 001384 945 GKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRV 1023 (1088)
Q Consensus 945 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1088)
+.+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... +.....
T Consensus 161 ~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~ 236 (303)
T cd05088 161 YVAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL 236 (303)
T ss_pred CcEEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHHH
Confidence 99999999998643211 11112234668999999888889999999999999999998 99999754321 111111
Q ss_pred hccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1024 MGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.. .. ....+......+.+++.+|++.+|++||+++++++.++++++
T Consensus 237 ~~-~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 237 PQ-GY---------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred hc-CC---------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 10 00 000111233567889999999999999999999999998754
No 153
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2e-34 Score=319.31 Aligned_cols=254 Identities=25% Similarity=0.389 Sum_probs=199.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCc----EEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGR----EVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
++|++.+.||+|+||+||+|.+. +++ .+++|.+...... ...++..|+..+.+ +.||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~----l~h~~iv~~~~~~~~-~ 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS----LDHAYIVRLLGICPG-A 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc----CCCCCcceEEEEECC-C
Confidence 46788899999999999999974 344 4777887543221 22456667777765 689999999998764 4
Q ss_pred eEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 EKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..++++||+++|+|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||++++++.+|++|||.++.
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 577899999999999999764 5689999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchh-HHHHHHhhhccCCCCCCcc
Q 001384 958 VSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEEC-LVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 958 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 1034 (1088)
....... ......++..|+|||...+..++.++||||||+++|||++ |+.||.+.... ..++.... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~---~~------ 229 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG---ER------ 229 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC---Cc------
Confidence 6433322 2233456778999999988899999999999999999998 99999775432 11211100 00
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
...+..+...+.+++.+|+..||++||++.|+++.|+.+.+
T Consensus 230 ----------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 230 ----------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 00011123467888999999999999999999999998754
No 154
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.5e-35 Score=327.04 Aligned_cols=258 Identities=28% Similarity=0.414 Sum_probs=204.1
Q ss_pred CCCCccceecccCceEEEEEEeC--------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP--------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
++|.+.+.||+|+||.||+|++. ++..+|+|.+..... ....++..|++++..+. +||||+++++++.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~---~h~~i~~~~~~~~ 94 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG---KHKNIINLLGACT 94 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc---CCCCEeeEEEEEe
Confidence 56899999999999999999853 235699999986432 23356788999888632 6999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCE
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDRT----------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNV 939 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NI 939 (1088)
..+..++||||+++|+|.+++.... .+++.++++++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 9999999999999999999997542 488999999999999999999998 999999999999
Q ss_pred EEcCCCCEEEeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHH
Q 001384 940 LLDKEGKALVTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLV 1017 (1088)
Q Consensus 940 ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~ 1017 (1088)
+++.++.+||+|||.++......... .....++..|+|||...+..++.++||||+||++|||++ |..||.+... .
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~ 249 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--E 249 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--H
Confidence 99999999999999987654322111 112234568999999988889999999999999999998 8888865432 1
Q ss_pred HHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1018 EWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
+....... . .....+.....++.+++.+|++.+|++||++.||++.|++++..
T Consensus 250 ~~~~~~~~-~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 250 ELFKLLKE-G---------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHc-C---------------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 22111110 0 00111223346788899999999999999999999999998653
No 155
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6e-35 Score=326.16 Aligned_cols=257 Identities=30% Similarity=0.422 Sum_probs=204.8
Q ss_pred cCCCCccceecccCceEEEEEEeCC------CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPD------GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
.++|++.+.||+|+||.||+|.... ...+|+|++..... ....++.+|++++.++. +||||+++++++..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~i~~~~~~~~~ 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG---KHKNIINLLGVCTQ 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc---CCCCeeeEEEEEcC
Confidence 4578889999999999999998642 36799999876432 22346788999888632 79999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 001384 877 GSEKILVYEYMEGGSLEDIISDR----------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVL 940 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIl 940 (1088)
+...++||||+++|+|.++++.. ..+++..++.++.|++.|++|||+. +|+||||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence 99999999999999999999642 3589999999999999999999998 9999999999999
Q ss_pred EcCCCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHH
Q 001384 941 LDKEGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVE 1018 (1088)
Q Consensus 941 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~ 1018 (1088)
++.++.+|++|||.++.+...... ......++..|+|||...+..++.++|||||||++|||++ |..||.+.....
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-- 242 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-- 242 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--
Confidence 999999999999999876533221 1222335678999999888899999999999999999997 999987643211
Q ss_pred HHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1019 WGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
....... +.....+......+.+++.+|++.||++||++.|+++.|++++
T Consensus 243 ~~~~~~~----------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLKE----------------GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHc----------------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111110 0000112233467889999999999999999999999999886
No 156
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.3e-34 Score=314.83 Aligned_cols=248 Identities=30% Similarity=0.435 Sum_probs=199.5
Q ss_pred ceecccCceEEEEEEeC-C---CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 811 RIIGKGGFGTVYRGVLP-D---GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
+.||+|+||.||+|++. . +..+|+|.+...... ..+++.+|+++++. +.|||++++++++. ....++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~-~~~~~~v~e 75 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQ----LDHPCIVRLIGVCK-GEPLMLVME 75 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHh----cCCCCeeeEEEEEc-CCceEEEEE
Confidence 46999999999999853 2 268999999866432 45678899999986 67999999999876 456799999
Q ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 886 YMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|+++|+|.+++.....+++..+..++.|++.|++|||.. +++||||||+||+++.++.+||+|||.++.........
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 999999999998887899999999999999999999999 99999999999999999999999999998765433221
Q ss_pred cc--cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 966 ST--TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 966 ~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.. ...++..|+|||......++.++||||||+++|||++ |+.||...... +..........
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~~~~~-------------- 216 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLESGER-------------- 216 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCc--------------
Confidence 11 1223467999999988899999999999999999998 99999765431 11111110000
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
...+...+..+.+++.+|++.+|++||++.++++.|+++.
T Consensus 217 --~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 --LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0112223457889999999999999999999999999875
No 157
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.1e-34 Score=312.42 Aligned_cols=256 Identities=27% Similarity=0.436 Sum_probs=209.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++ ++|+|++++++++.+++..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~----~~~~~i~~~~~~~~~~~~~ 77 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQ----LDHPNVIKYLASFIENNEL 77 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHh----CCCCCeeeeeeeeecCCeE
Confidence 57899999999999999999986 78999999886432 2234578899999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 881 ILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
++||||+++|+|.+++.. ...+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.++++|||++.
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceee
Confidence 999999999999998864 34589999999999999999999999 99999999999999999999999999987
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
....... ......++..|+|||...+..++.++||||+|+++|+|++|+.||........+.......
T Consensus 155 ~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----------- 222 (267)
T cd08224 155 FFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK----------- 222 (267)
T ss_pred eccCCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-----------
Confidence 6543221 1233467889999999888889999999999999999999999997654322222222110
Q ss_pred chhhcCCCccccH-HHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1037 PVVLLGSGLAEGA-EEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
+...+.+. .....+.+++.+|++.+|++||++.+|+++|+++.
T Consensus 223 -----~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 -----CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00011111 34467889999999999999999999999999874
No 158
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.6e-34 Score=317.93 Aligned_cols=255 Identities=25% Similarity=0.403 Sum_probs=204.0
Q ss_pred CCCCccceecccCceEEEEEEeC-C---CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-D---GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
++|++.+.||+|+||.||+|.+. + +..+|+|.++.... ...+.+..|+.++.+ ++||||+++++++..++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~ 79 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQ----FDHPNIIHLEGVVTKSKP 79 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHh----CCCCCcceEEEEEecCCc
Confidence 46888899999999999999864 2 34799999876432 234578889999886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.++||||+++++|.+++... ..+++.++..++.|++.|++|||++ +++||||||+||+++.++.++++|||++...
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 99999999999999999764 4689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccc--cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 959 SAGDSHVST--TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 959 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
......... ...++..|+|||.+.+..++.++||||||+++||+++ |..||...... +........ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~---~----- 226 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEG---Y----- 226 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCC---C-----
Confidence 543222111 1223568999999998899999999999999999886 99999765331 111111100 0
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+.+...+..+.+++.+|++++|.+||++.++++.|++++
T Consensus 227 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 227 --------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred --------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 00111223457789999999999999999999999999874
No 159
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.1e-34 Score=318.15 Aligned_cols=253 Identities=27% Similarity=0.426 Sum_probs=196.9
Q ss_pred CCccceecccCceEEEEEEeCC-Cc--EEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC----
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPD-GR--EVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG---- 877 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~---- 877 (1088)
|.+.+.||+|+||.||+|.+.+ +. .||+|.++... ....+.+..|+++++. ++||||+++++++...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~ 76 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKE----FDHPNVMRLIGVCLQTVESE 76 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHh----CCCCCcceEEEEEccCCccc
Confidence 3467899999999999999754 32 68999887542 2233568889999886 6799999999987532
Q ss_pred --CeEEEEEEecCCCCHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEE
Q 001384 878 --SEKILVYEYMEGGSLEDIISD------RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALV 949 (1088)
Q Consensus 878 --~~~~lv~e~~~~gsL~~~l~~------~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl 949 (1088)
...++||||+++|+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 153 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCV 153 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEE
Confidence 246899999999999998742 23488999999999999999999998 9999999999999999999999
Q ss_pred eecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccC
Q 001384 950 TDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYG 1027 (1088)
Q Consensus 950 ~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1027 (1088)
+|||+++.+....... .....++..|+|||......++.++||||||+++|||++ |+.||.+.... +.........
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~ 231 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQGN 231 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC
Confidence 9999998764332211 123345678999999998899999999999999999999 78898764331 1111111000
Q ss_pred CCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1028 RHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
. ...+......+.+++.+|++.||++||++.|+++.|++++
T Consensus 232 ~----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 232 R----------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred C----------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 0 0111223456889999999999999999999999999864
No 160
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.6e-35 Score=332.76 Aligned_cols=238 Identities=27% Similarity=0.351 Sum_probs=194.5
Q ss_pred ceecccCceEEEEEEe----CCCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 811 RIIGKGGFGTVYRGVL----PDGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
+.||+|+||.||+++. .+|+.||+|++...... ....+..|++++.+ ++||||+++++++.++...|+||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAE----VNHPFIVKLHYAFQTEGKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHh----CCCCCcccEEEEEEcCCEEEEEE
Confidence 6799999999999985 25789999999864322 23456778888886 67999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 885 EYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
||+++|+|.+++.+...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 78 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~ 153 (318)
T cd05582 78 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K 153 (318)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-C
Confidence 9999999999998888899999999999999999999999 99999999999999999999999999987654321 2
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCC
Q 001384 965 VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSG 1044 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1088)
......|+..|+|||.+....++.++|||||||++|||++|+.||...... +..........
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~i~~~~~---------------- 215 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--ETMTMILKAKL---------------- 215 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--HHHHHHHcCCC----------------
Confidence 233457899999999998888999999999999999999999999865431 11111110000
Q ss_pred ccccHHHHHHHHHHHhhhcccCCCCCCCHHH
Q 001384 1045 LAEGAEEMSELLRIGVRCTAEAPNARPNVKE 1075 (1088)
Q Consensus 1045 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1075 (1088)
..+......+.+++.+|++.||++||++.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 011123356788999999999999999655
No 161
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.2e-34 Score=313.56 Aligned_cols=246 Identities=26% Similarity=0.438 Sum_probs=198.5
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCC
Q 001384 811 RIIGKGGFGTVYRGVLPDGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEG 889 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 889 (1088)
++||+|+||.||+|...+++.+|+|++...... ....+.+|++++.. ++||||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQ----YDHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHh----CCCCCcCeEEEEEecCCccEEEEECCCC
Confidence 368999999999999888899999998765322 23468889999886 6799999999999999999999999999
Q ss_pred CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccc
Q 001384 890 GSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 890 gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
++|.+++... ..+++..++.++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++.............
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 9999998754 4589999999999999999999998 99999999999999999999999999987643322212222
Q ss_pred ccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccc
Q 001384 969 IAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAE 1047 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1088)
..++..|+|||+..+..++.++||||||+++|++++ |..||.+...... ...... .. ....
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~--~~~~~~-~~---------------~~~~ 215 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA--REQVEK-GY---------------RMSC 215 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHHHc-CC---------------CCCC
Confidence 344678999999998899999999999999999998 9999976543211 111110 00 0001
Q ss_pred cHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1048 GAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1048 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
+...+.++.+++.+|++.+|++||++.|+++.|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1223467889999999999999999999999875
No 162
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2e-34 Score=320.85 Aligned_cols=257 Identities=26% Similarity=0.374 Sum_probs=202.8
Q ss_pred HcCCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
..++|++.+.||+|+||.||+|..+ .+..||+|.+..... .....+.+|+.+++. ++||||+++++++.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~ 79 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG----FTCHHVVRLLGVVS 79 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHh----CCCCCeeeEEEEEc
Confidence 3568999999999999999999753 245799999875432 233467788888886 67999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhc----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDR----------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG 945 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~ 945 (1088)
+....++||||+++|+|.++++.. ...++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~ 156 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 156 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCC
Confidence 999999999999999999999752 2356788899999999999999999 999999999999999999
Q ss_pred CEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhh
Q 001384 946 KALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRV 1023 (1088)
Q Consensus 946 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1088)
.++++|||+++........ ......++..|+|||...+..++.++|||||||++|||++ |+.||.+... .++....
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--~~~~~~~ 234 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV 234 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence 9999999998765432221 1222345678999999988899999999999999999998 7888876432 1122211
Q ss_pred hccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1024 MGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
.... ....+......+.+++.+|++.||++||++.|+++.+++.+
T Consensus 235 ~~~~----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 235 MDGG----------------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HcCC----------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1000 00011223457889999999999999999999999999865
No 163
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.5e-35 Score=331.75 Aligned_cols=241 Identities=26% Similarity=0.325 Sum_probs=191.8
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHH-HhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEV-LSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
+.||+|+||+||+|++. +++.||+|++.+... .....+..|... ++. ++||||+++++++.+++..++|||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~----~~h~~Iv~~~~~~~~~~~~~lv~e 76 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKN----VKHPFLVGLHFSFQTADKLYFVLD 76 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHh----CCCCCCCceeEEEEcCCeEEEEEe
Confidence 46999999999999976 578899999975422 122344444443 333 689999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 886 YMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|+++|+|.+++.....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~ 152 (325)
T cd05602 77 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGT 152 (325)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCC
Confidence 999999999998888899999999999999999999999 9999999999999999999999999998754322 122
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 966 STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... +..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~----------------- 213 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNILNKPL----------------- 213 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HHHHHHHhCCc-----------------
Confidence 34467899999999999989999999999999999999999999865432 11112110000
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.........+.+++.+|++.||.+||++.+.+.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 001123356788888999999999999875443
No 164
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-34 Score=324.57 Aligned_cols=258 Identities=29% Similarity=0.413 Sum_probs=204.9
Q ss_pred cCCCCccceecccCceEEEEEEeC--------CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP--------DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWC 874 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~ 874 (1088)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ....+++.+|+.+++.+. .||||+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~i~~~~~~~ 90 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG---KHKNIINLLGAC 90 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc---cCCCchheeEEE
Confidence 356888899999999999999741 24579999987542 233457889999988632 699999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 001384 875 LDGSEKILVYEYMEGGSLEDIISDR----------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASN 938 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~N 938 (1088)
......++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 9999999999999999999999753 2478889999999999999999999 99999999999
Q ss_pred EEEcCCCCEEEeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhH
Q 001384 939 VLLDKEGKALVTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECL 1016 (1088)
Q Consensus 939 Ill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~ 1016 (1088)
|+++.++.+||+|||.++......... .....++..|+|||+..+..++.++||||||+++|||++ |..||.+...
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-- 245 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 245 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--
Confidence 999999999999999998765332221 222345678999999988889999999999999999998 7888865432
Q ss_pred HHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1017 VEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.++......... ...+......+.+++.+|++.+|++||++.|+++.|++++.
T Consensus 246 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 246 EELFKLLKEGHR----------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHHHHHHHcCCc----------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 222222210000 01122334678889999999999999999999999999864
No 165
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.6e-35 Score=330.96 Aligned_cols=241 Identities=28% Similarity=0.330 Sum_probs=191.7
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||+||+|+.. +|+.||+|++.+... .....+..|..++.+ .++||||+++++++..++..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~---~~~hp~iv~~~~~~~~~~~~~lv~e~ 77 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLK---NVKHPFLVGLHYSFQTTEKLYFVLDF 77 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHH---hCCCCCCccEEEEEecCCEEEEEEcC
Confidence 46999999999999975 689999999975422 222345555554322 26899999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|+|.+++....++++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~ 153 (325)
T cd05604 78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTT 153 (325)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCc
Confidence 99999999998888899999999999999999999999 9999999999999999999999999998753221 1223
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....||..|+|||++.+..++.++||||+||++|||++|+.||...... +.......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~~~~~~~-----------------~ 214 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--EMYDNILHKPL-----------------V 214 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--HHHHHHHcCCc-----------------c
Confidence 3457899999999999989999999999999999999999999875432 11111110000 0
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCHHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNVKEVL 1077 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1077 (1088)
........+.+++.+|++.+|.+||++++.+
T Consensus 215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 215 LRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred CCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 0112335677889999999999999886433
No 166
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.7e-34 Score=319.70 Aligned_cols=254 Identities=30% Similarity=0.440 Sum_probs=201.2
Q ss_pred cCCCCccceecccCceEEEEEEeCC------CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPD------GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
+++|.+.+.||+|+||.||+|.+.+ +..||+|.+..... ..+..+..|+.+++. ++|+||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~ 80 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSK----FNHQNIVRLIGVSFE 80 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh----CCCCCEeeEEEEEcc
Confidence 4568899999999999999999753 56789998875432 234568889999986 679999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC---C
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRT-------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG---K 946 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~-------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~---~ 946 (1088)
....++||||+++++|.++++... .+++.++.+++.||+.|++|||+. +++||||||+||+++.++ .
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcc
Confidence 999999999999999999997653 489999999999999999999999 999999999999998765 5
Q ss_pred EEEeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhh
Q 001384 947 ALVTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVM 1024 (1088)
Q Consensus 947 ~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 1024 (1088)
+|++|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |..||...... +......
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~ 235 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFVT 235 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH
Confidence 9999999998763222111 112233568999999988899999999999999999997 99999765331 1111111
Q ss_pred ccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1025 GYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.... ...+...+..+.+++.+|++.+|++||++.||++.|++
T Consensus 236 ~~~~----------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 236 GGGR----------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred cCCc----------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 0000 00122234578889999999999999999999998863
No 167
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.1e-34 Score=331.22 Aligned_cols=257 Identities=23% Similarity=0.283 Sum_probs=200.1
Q ss_pred HHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 800 ILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 800 ~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
+....++|++.+.||+|+||.||+|+++ +++.||+|++.+... .....+.+|+.++.. ++||||+++++++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~----~~hp~iv~~~~~~~ 113 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----ANSPWVVQLFYAFQ 113 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh----CCCCCCCeEEEEEE
Confidence 3344578999999999999999999976 678999999865321 223456788888876 67999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
++...++||||+++|+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 114 DDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 999999999999999999998764 589999999999999999999999 9999999999999999999999999999
Q ss_pred eeecCCCCcccccccccccccCccccCCC----CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC
Q 001384 956 RVVSAGDSHVSTTIAGTVGYVAPEYGQTW----QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 956 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1088)
+..............||+.|+|||++... .++.++||||+||++|||++|+.||.+.... .....+........
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~~~~ 267 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMNHKNSLT 267 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCccc
Confidence 87654333333456799999999987653 3789999999999999999999999875431 11122211000000
Q ss_pred CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCC--CCCHHHHHHH
Q 001384 1032 GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNA--RPNVKEVLAM 1079 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~ 1079 (1088)
.+........+.+++.+|++.++.+ ||+++|+++.
T Consensus 268 -------------~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 268 -------------FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred -------------CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0011223456778888999844433 7788888763
No 168
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.3e-34 Score=313.36 Aligned_cols=248 Identities=26% Similarity=0.390 Sum_probs=203.5
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|++|.||+|..+ +++.|++|.+.... ......+..|+++++. ++|||++++++++.+++..++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAK----LDSSYIIRYYESFLDKGKLNI 76 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHh----cCCCCeehheeeeccCCEEEE
Confidence 4777899999999999999976 68999999987542 2334578889999886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||||+++++|.++++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 77 VMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred EEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 99999999999999764 5689999999999999999999998 999999999999999999999999999887654
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
... ......++..|+|||+..+..++.++||||||+++|+|++|+.||....+.. .......
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~--------------- 215 (256)
T cd08529 154 NTN-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LILKIIR--------------- 215 (256)
T ss_pred ccc-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHc---------------
Confidence 322 2234467889999999998899999999999999999999999997654311 1111110
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+.....+......+.+++.+|++.+|++||++.++++.
T Consensus 216 -~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 216 -GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00011122344678899999999999999999999863
No 169
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.2e-34 Score=322.50 Aligned_cols=257 Identities=28% Similarity=0.406 Sum_probs=204.2
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
++|++.+.||+|+||.||+|... .+..||||+++.... ...+.+.+|+++++++. +||||+++++++...
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~iv~~~~~~~~~ 111 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG---NHENIVNLLGACTIG 111 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc---CCCCcceEEEEEecC
Confidence 46888999999999999999742 345799999876532 23356889999998732 699999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 878 SEKILVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
+..++||||+++|+|.++++... .+++.++..++.|++.|++|||++ +|+|+||||+||+++.++.++++|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999997643 389999999999999999999999 9999999999999999999999999999
Q ss_pred eeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCc
Q 001384 956 RVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 956 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1088)
+....... .......++..|+|||.+....++.++||||+||++|||++ |..||....... ........ ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~~-~~----- 261 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIKE-GY----- 261 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHHc-CC-----
Confidence 76543221 11223345678999999988899999999999999999998 999987653311 11111110 00
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
....+.....++.+++.+|++.+|++||++.|+++.|++++
T Consensus 262 ----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 262 ----------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred ----------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 00011122357888999999999999999999999999864
No 170
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.8e-34 Score=330.50 Aligned_cols=263 Identities=26% Similarity=0.321 Sum_probs=199.9
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC----
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS---- 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~---- 878 (1088)
+|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++. ++||||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~~ 76 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCF----FKHDNVLSALDILQPPHIDPF 76 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHh----CCCCCcCCHhheecCCCcccc
Confidence 4788899999999999999975 78999999987532 2234568889999986 67999999999998776
Q ss_pred -eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 -EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 -~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..|+||||+. ++|.+++.....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 77 EEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred ceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 7899999996 58999988888899999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccc-
Q 001384 958 VSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAV- 1035 (1088)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1035 (1088)
.............++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+..... .. ..+............
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~-~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QL-DLITDLLGTPSLEAMR 230 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HH-HHHHHHcCCCCHHHHH
Confidence 65433333344567899999998766 457899999999999999999999998754311 00 000000000000000
Q ss_pred ------cchhhcC-CC-------ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1036 ------IPVVLLG-SG-------LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1036 ------~~~~~~~-~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....... .. .........++.+++.+|++.||++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0000000 00 0001122456788999999999999999999986
No 171
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=304.51 Aligned_cols=246 Identities=26% Similarity=0.399 Sum_probs=208.3
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
|.+.++||+|+||.||+|.++ .|+.+|+|++..+ ..-+++..|+.++++ ++.|++|++||.|......++|||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQ----C~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQ----CKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHH----cCCchhhhhhhhhccCCceEeehh
Confidence 667789999999999999987 6999999999765 445678899999997 679999999999999999999999
Q ss_pred ecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 886 YMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 886 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
||..|++.|.++. +.++++.++..+.+..+.||+|||.. .-||||||+-|||+..+|.+|++|||.|-.+.+. -.
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MA 184 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MA 184 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh-HH
Confidence 9999999999975 45799999999999999999999998 7899999999999999999999999999765421 12
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCC
Q 001384 965 VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSG 1044 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1088)
...++.||+.|||||++..-.|+.++||||+|+...||..|++||.+-.+. +....+ +.....-
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---------------RAIFMI-PT~PPPT 248 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---------------RAIFMI-PTKPPPT 248 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---------------ceeEec-cCCCCCC
Confidence 345678999999999999999999999999999999999999999864321 000111 1111222
Q ss_pred ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1045 LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1045 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...++....++.++++.|+-+.|++|.++..+++
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 3347778899999999999999999999988765
No 172
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.2e-34 Score=313.59 Aligned_cols=250 Identities=30% Similarity=0.485 Sum_probs=202.7
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
.+|++.+.||+|+||.||+|.+.+++.+|+|++.... ....++.+|++++++ +.|||++++++++......++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMK----LSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHh----CCCCCeeeEEEEEccCCceEEEE
Confidence 3577889999999999999998778899999987543 335678899999987 67999999999999999999999
Q ss_pred EecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 885 EYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||+++++|.++++.. ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999999999764 4689999999999999999999998 999999999999999999999999999876543222
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.......++.+|+|||...+..++.++||||+|+++|||++ |+.||...... +....... ...
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~------~~~-------- 219 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINA------GFR-------- 219 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhC------CCC--------
Confidence 11222334678999999988899999999999999999998 99999764431 11111110 000
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
...+.....++.+++.+|++.+|++||++.|+++.|
T Consensus 220 --~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 220 --LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 000111236788999999999999999999999886
No 173
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.9e-34 Score=318.91 Aligned_cols=241 Identities=30% Similarity=0.388 Sum_probs=192.4
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|+||.||+++.+ +|+.||+|++...... .+.....|++++++ ++||||+++++++.++...++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~----l~hp~i~~~~~~~~~~~~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEK----VNSPFIVNLAYAFESKTHLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHh----cCCCcEEEEEEEEecCCeEEEEEecCC
Confidence 699999999999975 6899999998754222 23445668888886 679999999999999999999999999
Q ss_pred CCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 889 GGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 889 ~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... ..
T Consensus 77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~ 151 (277)
T cd05607 77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TI 151 (277)
T ss_pred CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--ee
Confidence 999999886543 588999999999999999999999 99999999999999999999999999987764322 22
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhhccCCCCCCccccchhhcCCC
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVMGYGRHGPGRAVIPVVLLGSG 1044 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1088)
....++..|+|||++.+..++.++||||+||++|||++|+.||....+. ..+......... ...
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~~------ 217 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE--------VKF------ 217 (277)
T ss_pred eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc--------ccc------
Confidence 3356889999999998888999999999999999999999999764331 112222111000 000
Q ss_pred ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1045 LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1045 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......++.+++.+|++.||++||+++|+++
T Consensus 218 --~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 218 --EHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred --ccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 01123456788999999999999999977653
No 174
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.4e-34 Score=318.54 Aligned_cols=250 Identities=27% Similarity=0.418 Sum_probs=204.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.+|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++. +.|||++++++++..+...++|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~----~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE----NKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHh----CCCCCEeeEEEEEEeCCEEEEe
Confidence 57888999999999999999964 688999999987655556778899999886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++++|.++++.. .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 96 ~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 96 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred ecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 9999999999998654 589999999999999999999999 999999999999999999999999999876543221
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
......+++.|+|||...+..++.++|||||||++|+|++|+.||...... ..+..... ... +
T Consensus 172 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-~~~~~~~~-~~~--------~------ 234 (296)
T cd06654 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-RALYLIAT-NGT--------P------ 234 (296)
T ss_pred -ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-HhHHHHhc-CCC--------C------
Confidence 123346888999999998888999999999999999999999999765431 11111110 000 0
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
....+......+.+++.+|++.||++||++.|+++.
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 235 ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 001122344668889999999999999999999873
No 175
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.9e-34 Score=316.60 Aligned_cols=255 Identities=27% Similarity=0.382 Sum_probs=203.7
Q ss_pred CCCCccceecccCceEEEEEEeCC----CcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD----GREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
.+|.+.+.||+|+||.||+|.+.+ ...||||...... ....+.+.+|+.++++ +.||||+++++++.+ ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQ----FDHPHIVKLIGVITE-NP 80 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHh----CCCCchhceeEEEcC-CC
Confidence 457888999999999999998643 2468999887654 3344678899999886 679999999998875 55
Q ss_pred EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.++||||+++|+|.+++.... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 789999999999999997643 589999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
............++..|+|||.+....++.++||||||+++||+++ |..||.+....... .....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~--~~~~~------------ 223 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI--GRIEN------------ 223 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHHc------------
Confidence 5433222223344568999999888889999999999999999986 99999765431111 11110
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
+.....+...+..+.+++.+|+..+|++||++.|+++.|+++..
T Consensus 224 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 224 ----GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ----CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00011122344678889999999999999999999999998864
No 176
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.3e-34 Score=328.51 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=197.7
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC-
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS- 878 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~- 878 (1088)
..++|++.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++. ++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~ 94 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC----VNHKNIISLLNVFTPQKS 94 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHh----CCCCCEeeeeeeeccCCC
Confidence 3478999999999999999999975 68999999997542 2234567789999886 68999999999986543
Q ss_pred -----eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 879 -----EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 879 -----~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
..|+||||+++ ++.+.++. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 95 LEEFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ccccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 47999999976 67776643 478999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC----
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH---- 1029 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 1029 (1088)
+++..... .......+|..|+|||.+.+..++.++||||+||++|+|++|+.||.+.+. ...|..........
T Consensus 169 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 169 LARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH-IDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCcHHH
Confidence 99754321 223345789999999999998999999999999999999999999986543 22222111100000
Q ss_pred --------------C------CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 --------------G------PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 --------------~------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ...+..+.................+.+++.+|++.||++||++.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 000000000000000011122356789999999999999999999986
No 177
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.6e-34 Score=313.11 Aligned_cols=247 Identities=26% Similarity=0.374 Sum_probs=196.0
Q ss_pred eecccCceEEEEEEeC---CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEec
Q 001384 812 IIGKGGFGTVYRGVLP---DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYM 887 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~ 887 (1088)
.||+|+||.||+|.++ .+..||+|++..... ...+.+.+|+.++++ ++||||+++++++. ....++||||+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~----l~h~~ii~~~~~~~-~~~~~lv~e~~ 76 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQ----LDNPYIVRMIGVCE-AEALMLVMEMA 76 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHh----cCCCCeEEEEEEEc-CCCeEEEEEeC
Confidence 3899999999999864 355799999976532 223568899999987 68999999999875 45688999999
Q ss_pred CCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 888 EGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 888 ~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
++|+|.+++.. ...+++.++++++.|++.||+|||++ +++||||||+||+++.++.+|++|||++...........
T Consensus 77 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 77 SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99999999975 45689999999999999999999998 999999999999999999999999999976543322211
Q ss_pred --ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 967 --TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 967 --~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
....++..|+|||......++.++||||||+++||+++ |+.||...... ++....... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~----------------~ 215 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQG----------------K 215 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCC----------------C
Confidence 11233578999999888889999999999999999996 99999865431 111111100 0
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
....+..+..++.+++.+|+..+|++||++.+|.+.|+++.
T Consensus 216 ~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 216 RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 01112234567888999999999999999999999998864
No 178
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.5e-34 Score=318.93 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=207.1
Q ss_pred cCCCCccceecccCceEEEEEEeCC-----CcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec-
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPD-----GREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD- 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~- 876 (1088)
.++|++.+.||+|+||.||+|.+.+ +..||+|++.... ......+.+|+.++++ ++|||++++++++..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~----l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYG----LSHQNILPILHVCIED 80 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHh----CCCCCCCeEEEEEecC
Confidence 4678899999999999999999765 6789999987543 2234567889998886 689999999998776
Q ss_pred CCeEEEEEEecCCCCHHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEE
Q 001384 877 GSEKILVYEYMEGGSLEDIISDR--------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKAL 948 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~--------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~k 948 (1088)
+...++++||+++|+|.+++... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEE
Confidence 46789999999999999998653 3589999999999999999999998 999999999999999999999
Q ss_pred EeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhcc
Q 001384 949 VTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 949 l~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
++|||+++.+...+... .....++..|+|||+.....++.++||||||+++||+++ |+.||..... .++.......
T Consensus 158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~ 235 (280)
T cd05043 158 ITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDG 235 (280)
T ss_pred ECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcC
Confidence 99999998664433221 122345678999999988889999999999999999999 9999976543 2222222100
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
. . ...+...+.++.+++.+|++.||++||++.|+++.|+++.+.
T Consensus 236 ~---~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 236 Y---R-------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred C---C-------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0 0 001122345788999999999999999999999999998653
No 179
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.4e-34 Score=315.92 Aligned_cols=249 Identities=30% Similarity=0.443 Sum_probs=195.7
Q ss_pred ceecccCceEEEEEEeCC-Cc--EEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLPD-GR--EVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
++||+|+||.||+|.+++ +. .+|+|.+.... ......+..|++++.++. +||||+++++++......++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~iv~~~~~~~~~~~~~lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG---HHPNIINLLGACEHRGYLYLAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc---cCCCeeeEEEEEecCCCceEEEEe
Confidence 368999999999999753 43 47888887542 233457888999988742 799999999999999999999999
Q ss_pred cCCCCHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEe
Q 001384 887 MEGGSLEDIISDRT----------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVT 950 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~----------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~ 950 (1088)
+++|+|.++++... .+++.+++.++.|++.|++|||+. +++||||||+||++++++.+|++
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEEC
Confidence 99999999997532 478999999999999999999998 99999999999999999999999
Q ss_pred ecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCC
Q 001384 951 DFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRH 1029 (1088)
Q Consensus 951 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1088)
|||++...... ........+..|+|||+.....++.++||||||+++|||++ |+.||.+.... +........
T Consensus 155 dfgl~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~~--- 227 (270)
T cd05047 155 DFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQG--- 227 (270)
T ss_pred CCCCccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HHHHHHhCC---
Confidence 99998532211 11112234567999999988899999999999999999997 99999764321 111111100
Q ss_pred CCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1030 GPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.....+.....++.+++.+|++.+|.+||++.|+++.|+++++
T Consensus 228 -------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~~ 270 (270)
T cd05047 228 -------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 270 (270)
T ss_pred -------------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence 0000112233568899999999999999999999999998863
No 180
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.3e-34 Score=313.41 Aligned_cols=247 Identities=31% Similarity=0.397 Sum_probs=199.8
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe-cCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL-DGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~-~~~~~~lv 883 (1088)
.+|++.+.||+|+||.||+|..+ |+.||+|.++.. ...+.+.+|+.++++ ++|+|++++++++. .+...++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQ----LRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHh----CCCCCeeeEEEEEEcCCCceEEE
Confidence 36888899999999999999874 788999998754 234578899999987 67999999999764 45678999
Q ss_pred EEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++++|.++++... .+++..+..++.|++.|++|||++ +++||||||+||+++.++.+|++|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999997644 488999999999999999999998 9999999999999999999999999998765322
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
. ....++..|+|||+.....++.++||||||+++|||++ |+.||..... .+..........
T Consensus 156 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~------------ 217 (256)
T cd05082 156 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYK------------ 217 (256)
T ss_pred C----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCC------------
Confidence 1 22344568999999988899999999999999999997 9999875432 112111110000
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
...+...+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 ----MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 001123346788899999999999999999999999864
No 181
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=326.03 Aligned_cols=200 Identities=27% Similarity=0.354 Sum_probs=172.4
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCC--CCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGF--GWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~--~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.++||+|+||.|.+|.+. +++.||||+++... ..-.+-..|+.+|..+.. .-.--|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 8999999999999999999976 68999999998763 333456778888877551 1223489999999999999999
Q ss_pred EEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC--CCEEEeecccceee
Q 001384 883 VYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE--GKALVTDFGLARVV 958 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~--~~~kl~Dfg~a~~~ 958 (1088)
|+|.++. +|+++++.+. .++...++.|+.||+.||.+||+. +|||+||||+|||+.+. ..+||+|||.++..
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999965 9999998765 588999999999999999999999 99999999999999754 47999999999876
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE 1014 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 1014 (1088)
... .. .+..+..|+|||++.+.+|+.+.||||||||++||++|.+.|.+..+
T Consensus 342 ~q~---vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 342 SQR---VY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred CCc---ce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 432 22 66788899999999999999999999999999999999888887644
No 182
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.9e-34 Score=313.63 Aligned_cols=251 Identities=26% Similarity=0.417 Sum_probs=204.1
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.++|++.+.||+|+||.||+|.+.++..+|+|.+.... .....+.+|++++++ ++|+|++++++++.+ ...+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKT----LQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHh----cCCCCcceEEEEEcC-CCeEEE
Confidence 46789999999999999999998778889999887642 234578889999986 679999999999887 778999
Q ss_pred EEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999999999763 3578999999999999999999998 9999999999999999999999999999766433
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchh-HHHHHHhhhccCCCCCCccccchh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEEC-LVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
.........++..|+|||++....++.++||||||+++|++++ |+.||.+.... ...+.....
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~--------------- 220 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY--------------- 220 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---------------
Confidence 2222223345678999999988889999999999999999999 89999765432 222111100
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
..+.+...+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 221 ----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 ----RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000112234578889999999999999999999999975
No 183
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=325.03 Aligned_cols=243 Identities=26% Similarity=0.379 Sum_probs=202.6
Q ss_pred ceecccCceEEEEEEeCC-CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCC
Q 001384 811 RIIGKGGFGTVYRGVLPD-GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEG 889 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 889 (1088)
-++|+|.||+||.|++.+ ....|||.+........+-+..|+...+. ++|+|||+++|.+.+++..-|.||-++|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~----LrHkNIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHST----LRHKNIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHH----HhhHhHHHHhhccCCCCeEEEEeecCCC
Confidence 479999999999999874 56789999987655556678889998886 7899999999999999999999999999
Q ss_pred CCHHHHHhh-cCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc-CCCCEEEeecccceeecCCCCcc
Q 001384 890 GSLEDIISD-RTRL--TWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD-KEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 890 gsL~~~l~~-~~~l--~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|+|.++++. .+++ .+.+.-.+.+||++||.|||++ .|||||||.+||||. -.|.+||+|||.++++..- ...
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP~ 732 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NPC 732 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC-Ccc
Confidence 999999975 4666 7888899999999999999999 999999999999996 5689999999999887543 234
Q ss_pred cccccccccccCccccCCC--CCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 966 STTIAGTVGYVAPEYGQTW--QATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
+.++.||..|||||++..+ .|+.++|||||||.+.||.||++||..... ...-+... .-.
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG-----------------myK 795 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG-----------------MYK 795 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc-----------------cee
Confidence 5678899999999987654 689999999999999999999999976432 11111111 111
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..++-|.+...+...+|.+|+.+||.+||++.++++
T Consensus 796 vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 796 VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 223346778889999999999999999999999875
No 184
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=325.87 Aligned_cols=247 Identities=28% Similarity=0.445 Sum_probs=209.4
Q ss_pred CCccceecccCceEEEEEEeC--CCc--EEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP--DGR--EVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
....+.||+|.||+|++|.|. .|+ .||||.++..... .-.+|.+|+.+|-+ ++|||++++||+..+ ....
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~----L~H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLK----LQHPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHh----ccCcceeEEeeeecc-chhh
Confidence 445688999999999999986 354 5899999987655 45689999999986 789999999999887 7788
Q ss_pred EEEEecCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISD--RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
+|||.++.|+|.+.+++ ...+-......++.|||.||.||.++ ++|||||.++|+++-....|||+|||+.+.+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 99999999999999987 33578888999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCcc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 960 AGDSHV--STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 960 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
..+.+. .....-.+.|+|||.+....++.++|||+|||.+|||+| |+.||.+-.. ..+.
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g------------------~qIL 325 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG------------------IQIL 325 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH------------------HHHH
Confidence 655433 223455678999999999999999999999999999999 7789987543 1222
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
..+-.+.+++.+..+.+++++++++||...|++||++.+|.+.
T Consensus 326 ~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 326 KNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred HhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 2222455667788999999999999999999999999999743
No 185
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.2e-34 Score=318.83 Aligned_cols=252 Identities=27% Similarity=0.415 Sum_probs=203.0
Q ss_pred CCCCccceecccCceEEEEEEeCC------CcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD------GREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
++|++.+.||+|+||.||+|.++. +..||+|.+.... ......+.+|+.++.. +.||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE----FNCHHVVRLLGVVSTG 81 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHh----CCCCceeEEEEEEcCC
Confidence 478889999999999999998642 3689999987553 2334568889998886 6799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCE
Q 001384 878 SEKILVYEYMEGGSLEDIISDRT----------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKA 947 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~----------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~ 947 (1088)
...++||||+++|+|.+++.... .+++..++.++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCE
Confidence 99999999999999999986432 368889999999999999999998 99999999999999999999
Q ss_pred EEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchh-HHHHHHhhh
Q 001384 948 LVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEEC-LVEWGRRVM 1024 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~-~~~~~~~~~ 1024 (1088)
||+|||+++.....+. .......++..|+|||......++.++||||||+++||+++ |..||.+.... ...+.. .
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--~ 236 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI--D 236 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh--c
Confidence 9999999876543322 12233456788999999888889999999999999999998 89999765431 111111 0
Q ss_pred ccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1025 GYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
. .....+...+.++.+++.+|++.+|++||++.|+++.|++
T Consensus 237 --~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 237 --G---------------GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred --C---------------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 0 0001122235678899999999999999999999999864
No 186
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4e-34 Score=324.61 Aligned_cols=254 Identities=26% Similarity=0.303 Sum_probs=196.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||+||+|+.. +++.||+|++.+.. ....+.+.+|..++.. ++|+||+++++++.++...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~ 76 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN----GDRRWITNLHYAFQDENNL 76 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh----CCCCCCCceEEEEecCCeE
Confidence 47899999999999999999975 68999999997532 1223457788888875 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
|+||||+++|+|.+++.+ ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999999999976 45799999999999999999999999 99999999999999999999999999997765
Q ss_pred CCCCcccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQT-----WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
...........||+.|+|||++.. ..++.++||||+||++|||++|+.||.+... .+.............
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~--~~~~~~i~~~~~~~~--- 228 (331)
T cd05597 154 ADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHKEHFQ--- 228 (331)
T ss_pred CCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH--HHHHHHHHcCCCccc---
Confidence 433333334568999999998763 4678899999999999999999999976432 222222221110000
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCC--CCCCCHHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAP--NARPNVKEVLAM 1079 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP--~~RPs~~eil~~ 1079 (1088)
++ .........+.+++.+|+..++ ..||++.++++.
T Consensus 229 -~~--------~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 -FP--------PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -CC--------CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 00 0011133466777778775433 347888888753
No 187
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.1e-34 Score=316.12 Aligned_cols=253 Identities=25% Similarity=0.428 Sum_probs=202.4
Q ss_pred CCCccceecccCceEEEEEEeC-CC---cEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DG---REVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.|++.+.||+|+||.||+|.++ ++ ..||||++.... ....+++..|+.+++. ++||||+++++++.++...
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ----FDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh----CCCcCcceEEEEECCCCce
Confidence 4778899999999999999975 33 369999987652 2234678999999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
++||||+++|+|.++++.. ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999999999763 4689999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCccc--cccc--ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCch-hHHHHHHhhhccCCCCCCc
Q 001384 960 AGDSHVS--TTIA--GTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEE-CLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 960 ~~~~~~~--~~~~--gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 1033 (1088)
....... .... .+..|+|||+.....++.++||||+|+++|||++ |..||..... ....+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~--------- 228 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY--------- 228 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---------
Confidence 3222111 1111 2457999999998899999999999999999886 9999976543 1222211000
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+.+...+..+.+++.+|++++|.+||++.+|++.|++++
T Consensus 229 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 269 (269)
T cd05065 229 ----------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269 (269)
T ss_pred ----------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 00111233456788999999999999999999999999864
No 188
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.3e-35 Score=328.69 Aligned_cols=237 Identities=27% Similarity=0.340 Sum_probs=190.1
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHH-HHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEME-VLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
++||+|+||.||+|++. +++.||+|++.+... .....+..|.. +++. ++||||+++++++.+.+..|+|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~----~~h~~iv~~~~~~~~~~~~~lv~e 76 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKN----LKHPFLVGLHYSFQTAEKLYFVLD 76 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHh----CCCCCccceeeEEEcCCEEEEEEc
Confidence 46999999999999976 688999999875422 12234555554 3443 689999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 886 YMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|+++|+|.+++.....+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (321)
T cd05603 77 YVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ET 152 (321)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cc
Confidence 999999999998888899999999999999999999998 99999999999999999999999999987532221 22
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 966 STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+. .+........ ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~-----------------~~ 213 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--SQMYDNILHK-----------------PL 213 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--HHHHHHHhcC-----------------CC
Confidence 3345789999999999988999999999999999999999999987543 1222222100 00
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCHH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNVK 1074 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1074 (1088)
..+......+.+++.+|++.||.+||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11122345688899999999999999764
No 189
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.1e-34 Score=320.00 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=201.0
Q ss_pred CCCccceecccCceEEEEEEeC------CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
+|++.+.||+|+||.||+|... .++.||+|++...... ....+..|+.++.. ++||||+++++++....
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~----l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR----LQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhc----CCCCCcCeEEEEEcCCC
Confidence 4677789999999999999863 2478999999865322 23567888888876 67999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc
Q 001384 879 EKILVYEYMEGGSLEDIISDR----------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD 942 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~ 942 (1088)
..++++||+++++|.+++... ..+++..+.+++.|++.||+|+|+. +|+||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~ 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVF 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEec
Confidence 999999999999999998532 2478889999999999999999999 999999999999999
Q ss_pred CCCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHH
Q 001384 943 KEGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWG 1020 (1088)
Q Consensus 943 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~ 1020 (1088)
+++.+||+|||+++........ ......+++.|+|||.+....++.++||||+|+++|||++ |..||.+... .++.
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~ 236 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVI 236 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HHHH
Confidence 9999999999998865433221 1223345778999999888889999999999999999998 8888876433 2232
Q ss_pred HhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1021 RRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
........ ...+...+..+.+++.+|++.+|++||++++|++.|+.
T Consensus 237 ~~i~~~~~----------------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EMIRNRQV----------------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHcCCc----------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 32221110 01122345668899999999999999999999999864
No 190
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.9e-34 Score=316.31 Aligned_cols=254 Identities=27% Similarity=0.452 Sum_probs=201.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCc----EEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGR----EVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
.+|++.+.||+|+||+||+|.+. +++ .||+|++..... ...+.+.+|+.++.. ++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~- 81 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG----VGSPYVCRLLGICLTS- 81 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHh----cCCCCCceEEEEEcCC-
Confidence 46888899999999999999854 444 489999875432 234567888888876 6799999999998754
Q ss_pred eEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 EKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..+++|||+++|+|.++++.. ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 467999999999999999764 5689999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCch-hHHHHHHhhhccCCCCCCcc
Q 001384 958 VSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEE-CLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 958 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
+....... .....++..|+|||...+..++.++|||||||++|||++ |..||..... ....+..... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~------ 229 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE---R------ 229 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---c------
Confidence 65332211 112234678999999988899999999999999999998 8999876433 1212111100 0
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.+.+.....++.+++.+|++.||++||++.|+++.|+++..
T Consensus 230 ----------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 230 ----------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred ----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00112234578889999999999999999999999998754
No 191
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.2e-34 Score=319.45 Aligned_cols=254 Identities=29% Similarity=0.437 Sum_probs=203.1
Q ss_pred cCCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
.++|++.+.||+|+||.||+|.+. ++..||+|++..... ....++.+|+.++++ +.||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~----l~h~~iv~~~~~~~~ 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE----FDHPNIVKLLGVCAV 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHh----cCCCchheEEEEEcC
Confidence 457889999999999999999863 467899999876532 234568889999986 679999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRT----------------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDV 934 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~----------------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DL 934 (1088)
+...++||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +++||||
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl 156 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDL 156 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence 999999999999999999996432 378889999999999999999999 9999999
Q ss_pred CCCCEEEcCCCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCC
Q 001384 935 KASNVLLDKEGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGG 1012 (1088)
Q Consensus 935 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~ 1012 (1088)
||+||++++++.++++|||.+......... .......+..|+|||...+..++.++|||||||++|||++ |..||.+.
T Consensus 157 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred cHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999998765432211 1222334667999999888899999999999999999997 88898764
Q ss_pred chhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1013 EECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
... ++...... .. ....+...+.++.+++.+|++.||++||++.|+++.|++
T Consensus 237 ~~~--~~~~~~~~----~~------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 AHE--EVIYYVRD----GN------------VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CHH--HHHHHHhc----CC------------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 331 22121110 00 001112234678899999999999999999999999974
No 192
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-34 Score=330.43 Aligned_cols=250 Identities=24% Similarity=0.349 Sum_probs=196.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|+..+.||+|+||.||+|+.+ +++.||+|++..... .....+..|+.++.. ++||+|+++++++.+++..
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~iv~~~~~~~~~~~~ 76 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVE----ADGAWVVKMFYSFQDKRNL 76 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh----CCCCCEeeEEEEEEcCCEE
Confidence 36888999999999999999976 688999999975421 223567788888876 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++|+|.+++.+...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 77 YLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred EEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999999998888899999999999999999999999 999999999999999999999999999875432
Q ss_pred CCC----------------------------------cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCC
Q 001384 961 GDS----------------------------------HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGR 1006 (1088)
Q Consensus 961 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~ 1006 (1088)
... .......||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 110 0012346899999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC---HHHHH
Q 001384 1007 RALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN---VKEVL 1077 (1088)
Q Consensus 1007 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil 1077 (1088)
.||.+.... +.......... ...++. ......++.+++.+|+. ||.+|++ +.|++
T Consensus 234 ~Pf~~~~~~--~~~~~i~~~~~----~~~~p~---------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~ 291 (360)
T cd05627 234 PPFCSETPQ--ETYRKVMNWKE----TLVFPP---------EVPISEKAKDLILRFCT-DSENRIGSNGVEEIK 291 (360)
T ss_pred CCCCCCCHH--HHHHHHHcCCC----ceecCC---------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHh
Confidence 999875442 11122221100 000110 01123456677777764 9999996 45554
No 193
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.8e-34 Score=317.22 Aligned_cols=269 Identities=24% Similarity=0.371 Sum_probs=202.8
Q ss_pred CCCccceecccCceEEEEEEe-----CCCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--
Q 001384 806 KFSEDRIIGKGGFGTVYRGVL-----PDGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG-- 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~-- 877 (1088)
-|++.+.||+|+||.||.|+. .+++.||+|.+.... ......+.+|+++++. +.|||++++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN----LYHENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHh----CCCCCeeeeeeEEecCCC
Confidence 467889999999999999984 257889999987543 2234578899999987 6799999999998875
Q ss_pred CeEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 SEKILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++||||+++++|.+++.+.. .+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 56889999999999999997643 589999999999999999999999 99999999999999999999999999998
Q ss_pred eecCCCCc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 957 VVSAGDSH--VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
........ ......++..|+|||...+..++.++||||||+++|||++++.|+.......... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 234 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKM---IGPTHGQMTVTR 234 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhh---cccccccccHHH
Confidence 76433221 1223456778999999888889999999999999999999887654321100000 000000000000
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
.......+...+.+......+.+++.+|++.+|++||+++|+++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 235 LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred HHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 00000011111112234567999999999999999999999999999874
No 194
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-34 Score=323.03 Aligned_cols=257 Identities=28% Similarity=0.424 Sum_probs=202.5
Q ss_pred CCCCccceecccCceEEEEEEeC--------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP--------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
++|.+.+.||+|+||.||+|... ....+|+|+++.... ....++..|+++++++. +||||+++++++.
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~iv~~~~~~~ 88 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG---KHKNIINLLGVCT 88 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc---CCCCeeeEEEEEc
Confidence 56888999999999999999742 245799999875432 23356788999888632 6999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCE
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDR----------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNV 939 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NI 939 (1088)
.....++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 999999999999999999999653 2488999999999999999999998 999999999999
Q ss_pred EEcCCCCEEEeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHH
Q 001384 940 LLDKEGKALVTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLV 1017 (1088)
Q Consensus 940 ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~ 1017 (1088)
+++.++.+|++|||.++.....+... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.+....
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-- 243 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE-- 243 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 99999999999999998654322211 112234467999999888899999999999999999999 88888764321
Q ss_pred HHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1018 EWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
+....... .. ....+...+.++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 244 ~~~~~~~~-~~---------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 244 ELFKLLRE-GH---------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHHHHc-CC---------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11111110 00 000122234578889999999999999999999999998864
No 195
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=6.7e-34 Score=313.11 Aligned_cols=248 Identities=25% Similarity=0.438 Sum_probs=201.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc---------hHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---------EREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
+|.+.+.||+|++|.||+|.+. +++.+|+|.+....... .+.+..|+.++++ ++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~ 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKE----LQHENIVQYLGSSL 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHh----cCCCCeeeEEEEEE
Confidence 4778899999999999999975 57899999887543221 1457788998886 67999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
+....++||||+++++|.+++.....+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 77 DADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred eCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999999998888899999999999999999999998 9999999999999999999999999998
Q ss_pred eeecCCCCc-----ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC
Q 001384 956 RVVSAGDSH-----VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG 1030 (1088)
Q Consensus 956 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1030 (1088)
+........ ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||........ ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~----- 226 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA--IFKIGE----- 226 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--HHHHhc-----
Confidence 876421111 11234578899999999888899999999999999999999999986533111 111110
Q ss_pred CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......+......+.+++.+|++.||.+||++.||++
T Consensus 227 -----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 -----------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0001112234467888999999999999999999875
No 196
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.9e-34 Score=312.98 Aligned_cols=246 Identities=34% Similarity=0.506 Sum_probs=203.0
Q ss_pred ceecccCceEEEEEEeCC----CcEEEEEEccccCccc-hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 811 RIIGKGGFGTVYRGVLPD----GREVAVKKLQREGLEG-EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
+.||+|+||.||+|.... +..||+|++....... .+.+.+|++.+.. ++|+|++++++++..+...++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~~lv~e 76 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKK----LGHPNVVRLLGVCTEEEPLYLVLE 76 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhh----cCCCChheeeeeecCCCceEEEEE
Confidence 469999999999999763 7889999998764333 5678899999986 579999999999999999999999
Q ss_pred ecCCCCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 886 YMEGGSLEDIISDR---------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~---------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
|+++++|.++++.. ..+++.+++.++.|++.|++|||++ +++||||+|+||++++++.+|++|||.+.
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccc
Confidence 99999999999875 6799999999999999999999998 99999999999999999999999999998
Q ss_pred eecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 957 VVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
....... .......++..|+|||......++.++||||+|+++|||++ |..||..... .+.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~--------- 222 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK--------- 222 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc---------
Confidence 7654321 12334457889999999888899999999999999999999 6999987533 111111110
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
+.....+...+.++.+++.+|++.+|++||++.|+++.|+
T Consensus 223 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 -------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111112333567889999999999999999999998874
No 197
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.8e-34 Score=326.45 Aligned_cols=259 Identities=27% Similarity=0.411 Sum_probs=201.5
Q ss_pred CCCCccceecccCceEEEEEEe------CCCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVL------PDGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
++|++.+.||+|+||.||+|.+ .+++.||||+++..... ....+.+|+.++.++. +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---~h~niv~~~~~~~~~ 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG---HHLNVVNLLGACTKP 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc---CCccHhhhcceeecC
Confidence 5799999999999999999974 24678999999764322 2346788999998743 689999999987654
Q ss_pred -CeEEEEEEecCCCCHHHHHhhc---------------------------------------------------------
Q 001384 878 -SEKILVYEYMEGGSLEDIISDR--------------------------------------------------------- 899 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~--------------------------------------------------------- 899 (1088)
...++||||+++|+|.++++..
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 5678999999999999998642
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc-cccc
Q 001384 900 ----------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH-VSTT 968 (1088)
Q Consensus 900 ----------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~ 968 (1088)
..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+|++|||++......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 1367888899999999999999999 9999999999999999999999999998765332221 1222
Q ss_pred ccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccc
Q 001384 969 IAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAE 1047 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1088)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ........ .. ....
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~-~~---------------~~~~ 303 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKE-GT---------------RMRA 303 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhc-cC---------------CCCC
Confidence 345678999999888899999999999999999997 899987643211 11111110 00 0000
Q ss_pred cHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1048 GAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1048 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
+.....++.+++.+|++.||++||++.||++.|+.++..
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111234688999999999999999999999999998753
No 198
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.6e-34 Score=335.96 Aligned_cols=260 Identities=23% Similarity=0.295 Sum_probs=191.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC-----
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG----- 877 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~----- 877 (1088)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+|+.+++. ++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~----l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKN----LNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHh----cCCCCCcceeeeEeecccccC
Confidence 467999999999999999999975 68899999886542 234568888886 6799999999876432
Q ss_pred ---CeEEEEEEecCCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-CEEE
Q 001384 878 ---SEKILVYEYMEGGSLEDIIS----DRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-KALV 949 (1088)
Q Consensus 878 ---~~~~lv~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-~~kl 949 (1088)
...++||||+++ ++.+++. ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceee
Confidence 246789999975 7877764 345699999999999999999999999 999999999999999665 6999
Q ss_pred eecccceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhhcc
Q 001384 950 TDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVMGY 1026 (1088)
Q Consensus 950 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~ 1026 (1088)
+|||+|+.+.... ......||+.|+|||++.+ ..++.++||||+||++|||++|..||.+.... ....... ...
T Consensus 213 ~DFGla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~-~~~ 289 (440)
T PTZ00036 213 CDFGSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQV-LGT 289 (440)
T ss_pred eccccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCC
Confidence 9999998764322 2234568999999998755 47899999999999999999999999875431 1111111 000
Q ss_pred CCC-------CC-CccccchhhcC-CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1027 GRH-------GP-GRAVIPVVLLG-SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1027 ~~~-------~~-~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... .. ....++..... .....+...+.++.+++.+||+.||.+||++.|+++
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000 00 00000000000 000011223457889999999999999999999973
No 199
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=7.3e-34 Score=316.57 Aligned_cols=266 Identities=25% Similarity=0.292 Sum_probs=195.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEec-----C
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD-----G 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~-----~ 877 (1088)
+|++.+.||+|+||+||+|+++ +++.||+|.+...... ....+.+|++++..+. .+.||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLE-AFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhh-hcCCCCeeeeeeeeccccCCCC
Confidence 5888999999999999999976 6889999998754221 2245667777776532 2579999999998764 3
Q ss_pred CeEEEEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 878 SEKILVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
...++||||+++ +|.++++.. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence 457899999975 899988764 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhH-HHHHHhhhccCCCCCC--
Q 001384 956 RVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECL-VEWGRRVMGYGRHGPG-- 1032 (1088)
Q Consensus 956 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~-- 1032 (1088)
+...... ......++..|+|||++.+..++.++||||+||++|||++|++||.+..... ................
T Consensus 156 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 156 RIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred ccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 8764321 2234567899999999988899999999999999999999999997654311 1111111100000000
Q ss_pred c-----cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1033 R-----AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1033 ~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. .....................+.+++.+|++.||++||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 000000000000001123456789999999999999999999874
No 200
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.5e-34 Score=318.00 Aligned_cols=259 Identities=24% Similarity=0.381 Sum_probs=200.3
Q ss_pred CCCCccceecccCceEEEEEEeCC---------------CcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCcee
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD---------------GREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLV 868 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv 868 (1088)
++|++.+.||+|+||.||+|.... ...||+|+++... ......+.+|++++.+ ++|||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~----l~h~~i~ 80 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSR----LKNPNII 80 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHh----CCCCCcC
Confidence 578999999999999999988642 2358999997642 2234578899999987 6799999
Q ss_pred EEeeEEecCCeEEEEEEecCCCCHHHHHhhcC------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 001384 869 TLYGWCLDGSEKILVYEYMEGGSLEDIISDRT------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKA 936 (1088)
Q Consensus 869 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp 936 (1088)
++++++......++||||+++++|.+++.... .+++..+++++.|++.|++|||+. +++||||||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp 157 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLAT 157 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccCh
Confidence 99999999999999999999999999986532 368899999999999999999999 999999999
Q ss_pred CCEEEcCCCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh--CCcCCCCCc
Q 001384 937 SNVLLDKEGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT--GRRALEGGE 1013 (1088)
Q Consensus 937 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~~~ 1013 (1088)
+||+++.++.+|++|||++......... ......++..|+|||+.....++.++||||||+++|+|++ |..||....
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 9999999999999999999765432221 1222345678999999888889999999999999999998 667776543
Q ss_pred h-hHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1014 E-CLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1014 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
. .......... .. . ..... ...+...+..+.+++.+|++.||++||++++|++.|++
T Consensus 238 ~~~~~~~~~~~~--~~-~-~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 DEQVIENTGEFF--RN-Q-GRQIY--------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hHHHHHHHHHhh--hh-c-ccccc--------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 2 1111111110 00 0 00000 00111234578999999999999999999999999863
No 201
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.8e-33 Score=316.29 Aligned_cols=264 Identities=25% Similarity=0.359 Sum_probs=203.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||.||+|.+. ++..+|+|.+..... ....++.+|++++.+ ++||||+++++++.+++..++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~l 76 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHE----CNSPYIVGFYGAFYSDGEISI 76 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHh----CCCCCCCeEEEEEeeCCEEEE
Confidence 36889999999999999999975 678899998875422 233568889999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++++|.++++...++++..+..++.|++.||+|||+.+ +++||||||+||+++.++.+|++|||++......
T Consensus 77 v~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 77 CMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred EeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 9999999999999988888999999999999999999999742 8999999999999999999999999998754321
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCc---------
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGR--------- 1033 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------- 1033 (1088)
......++..|+|||...+..++.++||||||+++|+|++|+.||...... .+..............
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCC
Confidence 223456889999999988888999999999999999999999999754321 1111111000000000
Q ss_pred -----------cccchhhcCCCcccc-HHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1034 -----------AVIPVVLLGSGLAEG-AEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1034 -----------~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+..+..........+ .....++.+++.+|++.+|++||++.|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000000000 1134568899999999999999999999865
No 202
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.6e-34 Score=316.99 Aligned_cols=260 Identities=24% Similarity=0.364 Sum_probs=204.8
Q ss_pred cCCCCccceecccCceEEEEEEeCC-----------------CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCC
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPD-----------------GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHP 865 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~ 865 (1088)
.++|++.+.||+|+||.||+|.+.. +..||+|++..... ...+.+.+|++++.+ ++||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~----l~~~ 79 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSR----LSDP 79 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHh----cCCC
Confidence 4578999999999999999998642 24589999876532 234578899999987 6799
Q ss_pred ceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcC-----------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 001384 866 NLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRT-----------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDV 934 (1088)
Q Consensus 866 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DL 934 (1088)
||+++++++..+...++||||+++++|.+++.+.. .+++..++.++.|++.||+|||+. +++||||
T Consensus 80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dl 156 (296)
T cd05051 80 NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDL 156 (296)
T ss_pred CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Ccccccc
Confidence 99999999999999999999999999999997755 689999999999999999999998 9999999
Q ss_pred CCCCEEEcCCCCEEEeecccceeecCCCC-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh--CCcCCCC
Q 001384 935 KASNVLLDKEGKALVTDFGLARVVSAGDS-HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT--GRRALEG 1011 (1088)
Q Consensus 935 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~ 1011 (1088)
||+||+++.++.++++|||+++.....+. .......++..|+|||+.....++.++||||||+++|||++ |..||..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 157 ATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred chhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999876543322 12233456778999999888889999999999999999998 6778865
Q ss_pred Cch-hHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1012 GEE-CLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1012 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
... .......... ... ...... ..+...+.++.+++.+|++.||++||++.||++.|++
T Consensus 237 ~~~~~~~~~~~~~~--~~~-~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 237 LTDQQVIENAGHFF--RDD-GRQIYL---------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred cChHHHHHHHHhcc--ccc-cccccC---------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 433 1111111111 000 000000 0122234678999999999999999999999998863
No 203
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.2e-34 Score=313.37 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=201.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
++|++.+.||+|+||.||+|++. +++.||+|.++.........+.+|+.+++. ++||||+++++++..++..++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~----l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKD----CKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHh----CCCCCeeeEEEEEEeCCEEEEE
Confidence 46788899999999999999965 688999999876543344567788888886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++++|.++++..+.+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+...... .
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~ 160 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-I 160 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc-c
Confidence 99999999999998888899999999999999999999999 9999999999999999999999999998765422 1
Q ss_pred cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 964 HVSTTIAGTVGYVAPEYGQ---TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
.......|+..|+|||++. ...++.++||||+||++|+|++|+.||....+....+..... . ..+...
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~---~------~~~~~~ 231 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS---N------FQPPKL 231 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc---C------CCCCcc
Confidence 1223456889999999864 456889999999999999999999998754432111111000 0 000000
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ........+.+++.+|++.+|++||+++++++
T Consensus 232 ~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 K-----DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred c-----ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0 01112346788999999999999999999875
No 204
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.4e-34 Score=311.53 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=201.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
+|++.+.||+|+||.||++.+. +++.+|+|.++... ....+.+..|+.+++. ++|||++++++++.+++..++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv 76 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAK----MKHPNIVAFKESFEADGHLYIV 76 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHh----CCCCCcceEEEEEEECCEEEEE
Confidence 4788899999999999999976 68899999986432 2334567889888886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+|+||||+||++++++.++++|||.+......
T Consensus 77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 9999999999988653 3589999999999999999999999 9999999999999999999999999999766432
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
.. ......++..|+|||+..+..++.++||||+|+++|+|++|+.||.........+ .... ..
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~--~~~~-~~------------- 216 (255)
T cd08219 154 GA-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLIL--KVCQ-GS------------- 216 (255)
T ss_pred cc-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHH--HHhc-CC-------------
Confidence 21 2234568889999999988889999999999999999999999998654311111 1110 00
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
....+......+.+++.+|++.||++||++.|++..
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 --YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 001122234568889999999999999999999864
No 205
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.9e-33 Score=308.55 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=206.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
++|++.+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++ ++||||+++++++.+....+++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKE----CRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHh----CCCCChhceEEEEEeCCEEEEE
Confidence 57889999999999999999975 578899999987655556788999999986 6899999999999999999999
Q ss_pred EEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 884 YEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
|||+++++|.++++.. .++++.++..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 9999999999999776 6899999999999999999999998 99999999999999999999999999987654321
Q ss_pred CcccccccccccccCccccCCC---CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTW---QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
.......++..|+|||..... .++.++||||+|+++|||++|+.||................+. +
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~---------~-- 223 (262)
T cd06613 156 -AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP---------P-- 223 (262)
T ss_pred -hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---------C--
Confidence 112334678899999998776 8899999999999999999999999765432111111100000 0
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...........++.+++.+|++.+|.+||++.||+.
T Consensus 224 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 224 ---PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ---ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000112344567899999999999999999999875
No 206
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.8e-34 Score=314.73 Aligned_cols=251 Identities=32% Similarity=0.520 Sum_probs=201.6
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchH--HHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGER--EFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
|++.+.||+|+||+||+|+.. +++.||+|++......... ....|+.++.+ ++||||+++++++.+....++|
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~----l~~~~i~~~~~~~~~~~~~~~v 76 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRR----LRHPNIVQILDVFQDDNYLYIV 76 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHH----HTBTTBCHEEEEEEESSEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccc----cccccccccccccccccccccc
Confidence 567899999999999999976 5678999999887544332 23458888886 5799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++++|.+++.....+++.++..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+.... ...
T Consensus 77 ~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~ 152 (260)
T PF00069_consen 77 MEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENN 152 (260)
T ss_dssp EEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STT
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccc
Confidence 99999999999999778899999999999999999999999 99999999999999999999999999998652 222
Q ss_pred cccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCCCccccchhhc
Q 001384 964 HVSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
.......++..|+|||+.. ...++.++||||+|+++|+|++|..||..... ............ ......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~- 223 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR--------PLPSSS- 223 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT--------HHHHHT-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--------cccccc-
Confidence 3344567899999999988 88999999999999999999999999987622 111111111100 000000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ........+.+++.+|++.||++||++.++++
T Consensus 224 --~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 --Q--QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp --T--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred --c--ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00011268899999999999999999999975
No 207
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=322.01 Aligned_cols=244 Identities=25% Similarity=0.421 Sum_probs=198.5
Q ss_pred ccceecccCceEEEEEEeC-CCcEEEEEEcccc----CccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe--EE
Q 001384 809 EDRIIGKGGFGTVYRGVLP-DGREVAVKKLQRE----GLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE--KI 881 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~--~~ 881 (1088)
...+||+|+|-+||+|.+. +|.+||--.++.. .....+.|..|+++++. ++||||+++|.+|.+... ..
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKs----L~H~NIirfy~SW~d~~n~~in 119 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKS----LKHPNIIRFYDSWVDTDNKTIN 119 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHcc----CCCCceeeeeeheecCCCceee
Confidence 3468999999999999986 5777774333221 12333789999999996 789999999999987654 77
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-CCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-EGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-~~~~kl~Dfg~a~~~~~ 960 (1088)
+|+|.+..|+|..|+++.++++.+.+..|++||++||.|||++ .|+|||||||.+||+|+. .|.|||+|+|+|+....
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 8999999999999999999999999999999999999999998 689999999999999985 48999999999988753
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
.. ...+.|||.|||||++. ..|...+||||||+++.||+|+..||..= ....+.+++..+.........+.
T Consensus 199 s~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC-~n~AQIYKKV~SGiKP~sl~kV~---- 269 (632)
T KOG0584|consen 199 SH---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC-TNPAQIYKKVTSGIKPAALSKVK---- 269 (632)
T ss_pred cc---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh-CCHHHHHHHHHcCCCHHHhhccC----
Confidence 32 23378999999999988 59999999999999999999999999642 23445555555333321111111
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..++.+||.+|+.. .++||++.|+++
T Consensus 270 -----------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 270 -----------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -----------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 24678888899999 999999999975
No 208
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.2e-34 Score=325.82 Aligned_cols=264 Identities=23% Similarity=0.313 Sum_probs=198.6
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG-- 877 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~-- 877 (1088)
..++|++.+.||+|+||.||+|.+. .++.||||++..... .....+.+|+.+++. ++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~ 90 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC----VNHKNIISLLNVFTPQKS 90 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHH----hCCCchhceeeeeecccc
Confidence 4578999999999999999999975 688999999976432 223567788888886 6799999999988643
Q ss_pred ----CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 878 ----SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 878 ----~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 91 LEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999976 77777654 488999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC----
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH---- 1029 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 1029 (1088)
+++.... ........+|..|+|||++.+..++.++||||+||++|+|++|+.||.+... ...|..........
T Consensus 165 ~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 165 LARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred ccccCCC--ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHH
Confidence 9976532 2223345789999999999988999999999999999999999999986542 12221111100000
Q ss_pred --------------CC--Cccccch----hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1030 --------------GP--GRAVIPV----VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1030 --------------~~--~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.. .....+. ................+.+++.+|++.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 0000000 00000001112234567899999999999999999999873
No 209
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.8e-33 Score=313.11 Aligned_cols=266 Identities=24% Similarity=0.295 Sum_probs=202.2
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
++|+..+.||+|+||.||+|+++ +++.||+|++..... ...+.+.+|++++++ ++|||++++++++..+...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~~~ 76 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQ----LKHPNLVNLIEVFRRKRKLH 76 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHh----CCCCCEeeeeeEEeeCCEEE
Confidence 46888999999999999999986 689999999875422 233567889999986 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++++|..++.....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 77 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 77 LVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred EEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999999999988887777899999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHH--HHhhhccCCC----CCCcc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEW--GRRVMGYGRH----GPGRA 1034 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~--~~~~~~~~~~----~~~~~ 1034 (1088)
.. ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||.+.......+ .......... .....
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence 21 2233457889999998765 567899999999999999999999998654421111 1110000000 00000
Q ss_pred ccchhhcCC---Cc---cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGS---GL---AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~---~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......... .. .........+.+++.+|++.+|++||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000 00 000122457889999999999999999999875
No 210
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.3e-33 Score=315.60 Aligned_cols=260 Identities=23% Similarity=0.356 Sum_probs=200.9
Q ss_pred CCCCccceecccCceEEEEEEeC-----------------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCc
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-----------------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPN 866 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~n 866 (1088)
++|++.+.||+|+||.||+|... ++..||+|++..... ....++.+|+++++. ++|+|
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~----l~~~~ 80 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSR----LKDPN 80 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHh----CCCCC
Confidence 56899999999999999998632 234689999976532 234678899999986 67999
Q ss_pred eeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcC-----------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 001384 867 LVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRT-----------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVK 935 (1088)
Q Consensus 867 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLk 935 (1088)
|+++++++..++..++||||+++|+|.+++.... .+++.+++.++.|++.|++|||+. +++|||||
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlk 157 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLA 157 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCC
Confidence 9999999999999999999999999999987542 367889999999999999999999 99999999
Q ss_pred CCCEEEcCCCCEEEeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh--CCcCCCCC
Q 001384 936 ASNVLLDKEGKALVTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT--GRRALEGG 1012 (1088)
Q Consensus 936 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt--g~~p~~~~ 1012 (1088)
|+||+++.++.++++|||+++.+...... ......++..|+|||......++.++|||||||++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 99999999999999999999765432221 1222344678999998888889999999999999999998 77888754
Q ss_pred chhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1013 EECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
... ++......+........ ..+.+..++..+.+++.+|++.||++||++.||++.|++
T Consensus 238 ~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDE--QVIENTGEFFRDQGRQV---------YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChH--HHHHHHHHHHhhccccc---------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 331 11111100000000000 001122344678899999999999999999999999874
No 211
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.9e-34 Score=318.68 Aligned_cols=265 Identities=21% Similarity=0.303 Sum_probs=198.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||.||+|+++ +++.||+|++..... .....+.+|++++++ ++||||+++++++..++..++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKD----LKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHh----CCCCCcceEEEEEeeCCeEEE
Confidence 56889999999999999999976 678899999875432 233467789999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++ +|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++.....
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 9999976 888887654 3589999999999999999999999 9999999999999999999999999998765332
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCCC------CCc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRHG------PGR 1033 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~------~~~ 1033 (1088)
.. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+.... ............... ...
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 158 TK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred cc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 21 2233457889999997754 56899999999999999999999999865431 111111111000000 000
Q ss_pred cccchhhcCCC----ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGSG----LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
........... .........++.+++.+|++.||.+||+++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000000 0001123456788999999999999999999986
No 212
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.6e-33 Score=307.10 Aligned_cols=247 Identities=31% Similarity=0.474 Sum_probs=199.4
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCC
Q 001384 811 RIIGKGGFGTVYRGVLPDGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEG 889 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 889 (1088)
++||+|+||.||+|.+.+++.||+|++...... ....+.+|++++++ +.||||+++++++.+....++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQ----YDHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHh----CCCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 469999999999999877999999998875443 44678899999886 6799999999999999999999999999
Q ss_pred CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc-c
Q 001384 890 GSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS-T 967 (1088)
Q Consensus 890 gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~-~ 967 (1088)
++|.+++.. ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+........... .
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 999999965 34689999999999999999999999 999999999999999999999999999876542211111 1
Q ss_pred cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 968 TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 968 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....+..|+|||.+.+..++.++||||||+++|||++ |..||...... .......... ...
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~----------------~~~ 215 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGY----------------RMP 215 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCC----------------CCC
Confidence 2234567999999888899999999999999999999 88888765431 1111111000 001
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.+...+..+.+++.+|++.+|.+||++.|+++.|++
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 122334578899999999999999999999998863
No 213
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8e-34 Score=322.41 Aligned_cols=254 Identities=24% Similarity=0.298 Sum_probs=196.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+++.+ +++.+|+|++.+... .....+..|+.++.. .+|++|+++++++.++...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~ 76 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----GDNQWITTLHYAFQDENNL 76 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhh----CCCCCEeeEEEEEecCCEE
Confidence 46889999999999999999976 578899999865321 122347778888775 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
++||||+++|+|.+++++ ...+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 77 ~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred EEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 999999999999999977 45789999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
...........||+.|+|||++. ...++.++|||||||++|||++|+.||..... .+....+..... ..
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~--~~~~~~i~~~~~----~~ 227 (332)
T cd05623 154 EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHKE----RF 227 (332)
T ss_pred cCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCCc----cc
Confidence 33333334457999999999875 34688999999999999999999999986532 222222221100 00
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCC--CCCHHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNA--RPNVKEVLAM 1079 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~ 1079 (1088)
.++. .......++.+++.+|+..++.+ |++++|+++.
T Consensus 228 ~~p~--------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 QFPA--------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cCCC--------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0110 01123456777888888654443 6888888654
No 214
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-33 Score=311.96 Aligned_cols=254 Identities=27% Similarity=0.390 Sum_probs=203.5
Q ss_pred CCCCccceecccCceEEEEEEeC------CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP------DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
++|++.+.||+|+||.||+|+.+ +.+.||+|.+...... ....+.+|++++++ ++||||+++++++.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRK----LSHKNVVRLLGLCREA 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHh----cCCcceeeeEEEECCC
Confidence 46888999999999999999964 2467999988765333 34678999999987 6799999999999998
Q ss_pred CeEEEEEEecCCCCHHHHHhhcC---------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEE
Q 001384 878 SEKILVYEYMEGGSLEDIISDRT---------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKAL 948 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~---------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~k 948 (1088)
...++||||+++|+|.++++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEE
Confidence 99999999999999999997655 689999999999999999999999 999999999999999999999
Q ss_pred EeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccC
Q 001384 949 VTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYG 1027 (1088)
Q Consensus 949 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1027 (1088)
++|||++...............++..|+|||.+.+..++.++||||+|+++|+|++ |..||....+.. .......
T Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~~~~~-- 233 (275)
T cd05046 158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLNRLQA-- 233 (275)
T ss_pred EcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHHHHHc--
Confidence 99999987543322222333456778999999888888999999999999999998 788886543311 1111110
Q ss_pred CCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1028 RHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
..... ..+...+..+.+++.+|++.+|++||++.|+++.|++
T Consensus 234 --~~~~~-----------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 234 --GKLEL-----------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred --CCcCC-----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 00000 0011234578889999999999999999999998864
No 215
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7e-34 Score=322.59 Aligned_cols=253 Identities=25% Similarity=0.294 Sum_probs=196.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|+.+ +++.||+|++.+... .....+.+|..++.. .+|++|+++++++.+++..
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~l~~~~~~~~~~ 76 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN----GDCQWITTLHYAFQDENYL 76 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHh----CCCCCEeeEEEEEEcCCEE
Confidence 47899999999999999999976 678899999875321 223447778888775 5799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
|+||||+++|+|.+++++ ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 77 ~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 77 YLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred EEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999999987 46789999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQT-----WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
...........|++.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+.......... ..
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--~~~~~~i~~~~~----~~ 227 (331)
T cd05624 154 QDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHEE----RF 227 (331)
T ss_pred CCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH--HHHHHHHHcCCC----cc
Confidence 433333334579999999998765 4678899999999999999999999986543 111122211000 00
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCC--CCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNA--RPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~ 1078 (1088)
..+. .......++.+++.+|+..++++ |++++++++
T Consensus 228 ~~p~--------~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 QFPS--------HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCC--------ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 0010 01122356778888998865544 457777764
No 216
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-33 Score=313.57 Aligned_cols=249 Identities=27% Similarity=0.425 Sum_probs=204.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.+|++.+.||.|++|.||+|.+. +++.||+|.+........+.+.+|+++++. ++|||++++++++..+...++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKE----LKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHh----cCCCceeeeeeeEecCceEEEE
Confidence 46889999999999999999964 789999999976655556678899999886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
+||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 95 MEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred EEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 9999999999998654 589999999999999999999999 999999999999999999999999999876543322
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||........ ......... ..
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~--~~~~~~~~~-~~------------ 234 (296)
T cd06655 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLIATNGT-PE------------ 234 (296)
T ss_pred -cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhcCC-cc------------
Confidence 22334678899999999888899999999999999999999999987544211 111110000 00
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...+......+.+++.+|+..||++||++.++++
T Consensus 235 -~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 -LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0012223456888999999999999999999975
No 217
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.8e-33 Score=307.79 Aligned_cols=246 Identities=28% Similarity=0.444 Sum_probs=199.5
Q ss_pred ceecccCceEEEEEEeCC--C--cEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 811 RIIGKGGFGTVYRGVLPD--G--REVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
++||+|++|.||+|.+.+ + ..||+|.+..... ...+.+..|+.++++ ++||||+++++++.+ ...++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~-~~~~~v~e 75 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHS----LDHENLIRLYGVVLT-HPLMMVTE 75 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhh----cCCCCccceeEEEcC-CeEEEEEE
Confidence 468999999999999643 3 3699999988765 455688999999987 679999999999988 88999999
Q ss_pred ecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 886 YMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|+++|+|.+++.... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999999997754 689999999999999999999999 999999999999999999999999999987654322
Q ss_pred c--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 964 H--VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 964 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
. ......++..|+|||+..+..++.++||||||+++|||++ |+.||....... ..........
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~------------ 218 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKEGE------------ 218 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhcCC------------
Confidence 1 1123456788999999998899999999999999999999 999997653321 1111110000
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
....+...+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 219 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 ---RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00111223467889999999999999999999999885
No 218
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-33 Score=328.41 Aligned_cols=263 Identities=19% Similarity=0.208 Sum_probs=199.8
Q ss_pred cCCCCccceecccCceEEEEEEeC---CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP---DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
..+|++.+.||+|+||.||+|... .++.||+|.+... ....+|++++++ ++||||+++++++......
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~----l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKT----ISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHh----cCCCCccceeeeEeeCCEE
Confidence 457999999999999999999853 3578999988654 245678999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++|||++. ++|.+++.....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.++|+|||+++....
T Consensus 162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 99999996 58999997778899999999999999999999999 999999999999999999999999999976654
Q ss_pred CCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-----hHHHHHHhhhccCCCCCCcc
Q 001384 961 GDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE-----CLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 961 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
.... ......||..|+|||++....++.++||||+||++|||++|+.||.+... .+..................
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 3222 22346799999999999988999999999999999999999999976432 11111110000000000000
Q ss_pred ---c---cchhhcCCCc--cc-----cHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1035 ---V---IPVVLLGSGL--AE-----GAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1035 ---~---~~~~~~~~~~--~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
. +......... .. ......++.+++.+|++.||++||++.|++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0000000000 00 01123467889999999999999999999863
No 219
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.3e-34 Score=315.13 Aligned_cols=248 Identities=28% Similarity=0.370 Sum_probs=197.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.|+..+.||+|+||.||+|.+. +++.||||.+...... ....+..|+.++++ ++|++++++++.+.+++..+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~----l~~~~i~~~~~~~~~~~~~~ 76 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEK----VNSRFVVSLAYAYETKDALC 76 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHh----CCCCCeeeeeEEEecCCEEE
Confidence 3677899999999999999976 6889999998754322 22456789999886 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
+||||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.++++|||++....
T Consensus 77 lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 999999999999988643 3589999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH-HHHHhhhccCCCCCCccccch
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLV-EWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.... .....|+..|+|||++.+..++.++||||+|+++|+|++|+.||........ +-..... . ....
T Consensus 154 ~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~---~--~~~~---- 222 (285)
T cd05630 154 EGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV---K--EVQE---- 222 (285)
T ss_pred CCcc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh---h--hhhh----
Confidence 3221 2234689999999999988999999999999999999999999986532111 0000000 0 0000
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC-----HHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN-----VKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~ 1078 (1088)
..+......+.+++.+|++.||++||+ ++|+++
T Consensus 223 -------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 -------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 001123346788999999999999999 788876
No 220
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.3e-33 Score=309.77 Aligned_cols=250 Identities=32% Similarity=0.464 Sum_probs=192.9
Q ss_pred ceecccCceEEEEEEeC----CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe-cCCeEEEEE
Q 001384 811 RIIGKGGFGTVYRGVLP----DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL-DGSEKILVY 884 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~-~~~~~~lv~ 884 (1088)
+.||+|+||.||+|.+. .+..||+|++.... ....+.+.+|+.+++. ++|||++++++++. .+...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKD----FSHPNVLSLLGICLPSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHcc----CCCCCcceEEEEeecCCCCcEEEE
Confidence 46899999999999853 23579999986432 2334577888888876 68999999999775 455688999
Q ss_pred EecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 885 EYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||+.+|+|.++++.. ...++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++.......
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999999999764 3467888899999999999999998 999999999999999999999999999876533211
Q ss_pred c---ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCC-cCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 964 H---VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGR-RALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 964 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
. ......++..|+|||......++.++||||||+++|||++|+ .||..... .+.........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~~~------------ 219 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQGR------------ 219 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhcCC------------
Confidence 1 112334567899999988889999999999999999999965 45554322 11222221100
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
....+...+..+.+++.+|++.+|++||++.||++.|+++..
T Consensus 220 ----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 220 ----RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ----CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 001111223568899999999999999999999999999874
No 221
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.9e-34 Score=337.73 Aligned_cols=271 Identities=19% Similarity=0.211 Sum_probs=195.7
Q ss_pred HHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCC--CCCCCceeEEeeEEec
Q 001384 800 ILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGF--GWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 800 ~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~--~l~h~niv~l~~~~~~ 876 (1088)
+...+++|++.+.||+|+||+||+|.+. .++.||||+++... ....+...|++++..+.. ...|.+++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3345688999999999999999999975 57889999996531 223345556665554321 2356779999998876
Q ss_pred C-CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC----------
Q 001384 877 G-SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG---------- 945 (1088)
Q Consensus 877 ~-~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~---------- 945 (1088)
+ .+.++|||++ +++|.+++.+.+.+++.++..|+.||+.||+|||+++ +||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCcccccccccc
Confidence 5 5788999998 6799999988888999999999999999999999732 999999999999998765
Q ss_pred ------CEEEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHH
Q 001384 946 ------KALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVE 1018 (1088)
Q Consensus 946 ------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~ 1018 (1088)
.+||+|||.+.... .......||..|+|||++.+..|+.++|||||||++|||++|+.||.+.... ...
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 355 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355 (467)
T ss_pred cCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 49999999875432 2234567899999999999999999999999999999999999999875431 111
Q ss_pred HHHhhh-ccCC-----------------CCCCccccchh----hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHH
Q 001384 1019 WGRRVM-GYGR-----------------HGPGRAVIPVV----LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEV 1076 (1088)
Q Consensus 1019 ~~~~~~-~~~~-----------------~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 1076 (1088)
...... .... ........+.. ...............+.+|+.+||+.||++||+++|+
T Consensus 356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~ 435 (467)
T PTZ00284 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435 (467)
T ss_pred HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence 110100 0000 00000000000 0000000001123467899999999999999999999
Q ss_pred HH
Q 001384 1077 LA 1078 (1088)
Q Consensus 1077 l~ 1078 (1088)
++
T Consensus 436 L~ 437 (467)
T PTZ00284 436 TT 437 (467)
T ss_pred hc
Confidence 86
No 222
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.2e-34 Score=314.91 Aligned_cols=246 Identities=30% Similarity=0.391 Sum_probs=197.7
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
|+..+.||+|+||+||+|.+. +++.||+|.+...... ....+.+|+++++. ++|+|++++++++..++..++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~----l~~~~i~~~~~~~~~~~~~~l 77 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEK----VNSQFVVNLAYAYETKDALCL 77 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHH----cCCcCceeEEEEEecCCEEEE
Confidence 677789999999999999975 6889999998764322 22356789999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||||+++++|.+++... .++++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 78 VLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred EEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 99999999999988653 3699999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhH--HHHHHhhhccCCCCCCccccch
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECL--VEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.. ......|+..|+|||++.+..++.++||||+|+++|||++|..||.+..+.. ..+....... ...
T Consensus 155 ~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~------~~~--- 223 (285)
T cd05632 155 GE--SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET------EEV--- 223 (285)
T ss_pred CC--cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc------ccc---
Confidence 22 2234568999999999988899999999999999999999999998754321 1111111100 000
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC-----HHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN-----VKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~ 1078 (1088)
.+......+.+++.+|++.||++||+ ++|+++
T Consensus 224 --------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 --------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred --------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 01123346778889999999999999 666655
No 223
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.6e-33 Score=308.08 Aligned_cols=250 Identities=26% Similarity=0.430 Sum_probs=201.9
Q ss_pred CCCccceecccCceEEEEEEeCCCcEEEEEEccccCc------cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGL------EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
+|.+.+.||+|+||+||+|...+++.+|+|.+..... .....+.+|++++++ ++|+||+++++++.+...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~ 76 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKS----LKHVNIVQYLGTCLDDNT 76 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHh----cCCCCEeeEeeEeecCCe
Confidence 4788899999999999999988899999998874321 112457889999886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.++||||+++++|.+++.+..++++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||.+....
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 77 ISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999999998878899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCC-----CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 960 AGD-----SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 960 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
... ........++..|+|||+..+..++.++||||+|+++|+|++|+.||...+... ....... . ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~---~----~~ 225 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFYIGA---H----RG 225 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHHhhh---c----cC
Confidence 211 111233568889999999998889999999999999999999999997643311 1111000 0 00
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+ ..+.....++.+++.+|++.+|.+||++.|+++
T Consensus 226 ~~~--------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 226 LMP--------RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCC--------CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 012233467888999999999999999999875
No 224
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.6e-35 Score=329.96 Aligned_cols=243 Identities=28% Similarity=0.330 Sum_probs=187.9
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccCccch---HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE---REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|+||+||+|++. +++.||||++.+...... ..+..|..++.... .-.||||+++++++.++...|+||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~~p~i~~~~~~~~~~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL-LDESPFIVGLKFSFQTDSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc-cCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence 699999999999976 689999999975432222 23445555554321 1169999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccc
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
+|+|.+++.+...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~ 155 (330)
T cd05586 80 GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNT 155 (330)
T ss_pred CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccC
Confidence 999999998888899999999999999999999999 99999999999999999999999999987543222 22334
Q ss_pred ccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccc
Q 001384 969 IAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAE 1047 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1088)
..||..|+|||++.+. .++.++||||+||++|||++|+.||.+.... +...... .... ..+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--~~~~~i~-~~~~-----~~~---------- 217 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--QMYRNIA-FGKV-----RFP---------- 217 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--HHHHHHH-cCCC-----CCC----------
Confidence 6789999999987654 5899999999999999999999999865431 1111111 0000 000
Q ss_pred cHHHHHHHHHHHhhhcccCCCCCCC----HHHHHH
Q 001384 1048 GAEEMSELLRIGVRCTAEAPNARPN----VKEVLA 1078 (1088)
Q Consensus 1048 ~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 1078 (1088)
.......+.+++.+|++.||.+||+ +.++++
T Consensus 218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0112346778899999999999995 555543
No 225
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.3e-33 Score=312.72 Aligned_cols=246 Identities=27% Similarity=0.422 Sum_probs=196.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.++||+|+||.||+|++. +++.||+|++.... ......+.+|++++.+ +.||||+++++++..++..++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~l 76 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYK----CDSPYIIGFYGAFFVENRISI 76 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHh----CCCCCeeeEEEEEEECCEEEE
Confidence 36788899999999999999964 68899999987542 2334578899999886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++++|..+ ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 77 v~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 77 CTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred EEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999999999765 3478899999999999999999999 9999999999999999999999999999765422
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-----HHHHHHhhhccCCCCCCccccc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC-----LVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||...... ...+........ +
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------~ 217 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED---------P 217 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC---------C
Confidence 223456889999999999889999999999999999999999999653210 111111111000 0
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
... .......++.+++.+|++.+|++||+++|+++.
T Consensus 218 ~~~------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 218 PVL------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCC------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000 011233467889999999999999999999764
No 226
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-33 Score=321.53 Aligned_cols=257 Identities=29% Similarity=0.406 Sum_probs=203.7
Q ss_pred CCCCccceecccCceEEEEEEeC--------CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP--------DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
.+|++.+.||+|+||.||+|... .+..||+|.+..... ...+++.+|++++.++. +||||+++++++.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~iv~~~~~~~ 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG---KHKNIINLLGACT 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc---CCCCeeeeeEEEc
Confidence 46889999999999999999742 123689998875432 23357888999988632 7999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCE
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDR----------------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNV 939 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NI 939 (1088)
.+...++||||+++|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 999999999999999999999753 2478899999999999999999998 999999999999
Q ss_pred EEcCCCCEEEeecccceeecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHH
Q 001384 940 LLDKEGKALVTDFGLARVVSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLV 1017 (1088)
Q Consensus 940 ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~ 1017 (1088)
+++.++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||.+... .
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~ 243 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--E 243 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH--H
Confidence 99999999999999998664322211 122334567999999988899999999999999999998 8888876432 2
Q ss_pred HHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1018 EWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
++........ ....+......+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 244 ~~~~~~~~~~----------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 244 ELFKLLKEGH----------------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHcCC----------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 2222221100 001112234578899999999999999999999999999873
No 227
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8.4e-34 Score=315.39 Aligned_cols=269 Identities=25% Similarity=0.386 Sum_probs=206.1
Q ss_pred CCCCccceecccCceEEEEEEeC-----CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEec--
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-----DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD-- 876 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~-- 876 (1088)
+.|+..+.||+|+||.||+|++. +++.||||++...... ..+.+.+|+++++. +.||||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~----l~~~~i~~~~~~~~~~~ 79 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRT----LDHENIVKYKGVCEKPG 79 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHh----CCCCChheEEeeeecCC
Confidence 35777899999999999999853 3678999999866443 45679999999886 679999999999887
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
....++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 567899999999999999997654 699999999999999999999998 9999999999999999999999999999
Q ss_pred eeecCCCCcc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCc
Q 001384 956 RVVSAGDSHV--STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 956 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1088)
.......... .....++..|+|||......++.++||||||+++|||++|+.|+.........+..... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~ 233 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQ---GQMIVT 233 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccc---ccccHH
Confidence 8765322211 11234456799999988889999999999999999999999998654321111000000 000000
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
............+.+..++.++.+++.+|++.+|++||++.||+++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 234 RLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00000000111111233446788999999999999999999999999986
No 228
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.5e-33 Score=308.49 Aligned_cols=249 Identities=32% Similarity=0.501 Sum_probs=201.6
Q ss_pred CCccceecccCceEEEEEEeCC-----CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPD-----GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
+++.+.||+|+||.||+|++.+ +..||+|++...... ..+.+..|++++.. ++|+||+++++++.+.+..
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~ 76 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRK----LDHPNIVKLLGVCTEEEPL 76 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHh----cCCCchheEEEEEcCCCee
Confidence 3567899999999999999753 378999999766433 45688899999986 5799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 881 ILVYEYMEGGSLEDIISDRTR--LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
+++|||+++++|.++++.... +++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+...
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceec
Confidence 999999999999999976554 89999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
............++..|+|||...+..++.++||||+|+++|+|++ |..||..... .+.........
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~---------- 221 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKGY---------- 221 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCC----------
Confidence 5443222222346789999999888889999999999999999998 7888875432 11111111000
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
....+...+.++.+++.+|++.||++||++.|+++.|
T Consensus 222 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 ------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0011122456788899999999999999999998864
No 229
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.5e-33 Score=306.41 Aligned_cols=248 Identities=26% Similarity=0.415 Sum_probs=203.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|+..+.||+|+||.||.++.. +++.+++|++.... ....+++.+|++++++ ++|+||+++++++.+.+..++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~~~~ 76 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSL----LQHPNIIAYYNHFMDDNTLLI 76 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHh----CCCCCeeEEEeEEecCCeEEE
Confidence 5888999999999999999965 68899999987543 2334578899999987 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||||+++++|.+++... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+.....
T Consensus 77 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 77 EMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred EEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 99999999999999765 4689999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
... ......++..|+|||...+..++.++||||+|+++|||++|+.||..... .+.......
T Consensus 154 ~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~~~~~~~~~--------------- 215 (256)
T cd08221 154 EYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--LNLVVKIVQ--------------- 215 (256)
T ss_pred ccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHc---------------
Confidence 332 23345688999999998888889999999999999999999999976543 122212110
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+...+.+.....++.+++.+|++.+|++||++.|+++.
T Consensus 216 -~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 216 -GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 00011112334568889999999999999999999875
No 230
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.2e-33 Score=306.92 Aligned_cols=249 Identities=27% Similarity=0.452 Sum_probs=204.3
Q ss_pred cCCCCccceecccCceEEEEEEeCC-CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPD-GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
.++|+..+.||+|+||.||+|..++ ++.+|+|.+..... .+++.+|++++++ ++||||+++++++.++...++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~----l~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQ----CDSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHh----CCCCcEeeeeeeeecCCcEEE
Confidence 3578999999999999999999864 78999999876522 5688999999987 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
++||+++++|.+++.. ...+++..++.++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 76 ~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred EEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 9999999999999975 45689999999999999999999999 9999999999999999999999999998876433
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
.. ......++..|+|||++.+..++.++||||||+++|+|++|+.||....+..... ... . ..
T Consensus 153 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--~~~---~-~~---------- 215 (256)
T cd06612 153 MA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--MIP---N-KP---------- 215 (256)
T ss_pred cc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--hhc---c-CC----------
Confidence 21 2233457889999999988899999999999999999999999997643311100 000 0 00
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......+......+.+++.+|++.||++||++.|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 216 PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0001112234467889999999999999999999975
No 231
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.2e-33 Score=309.20 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=200.3
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.+++.+.....||+|+||.||+|++. +++.||+|.+........+.+.+|++++++ ++|+||+++++++..++..
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY----LKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHh----cCCCCeeeeeeeeccCCEE
Confidence 34555666689999999999999965 578899999887655556688999999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhc-CCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-CCCEEEeecccce
Q 001384 881 ILVYEYMEGGSLEDIISDR-TRL--TWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-EGKALVTDFGLAR 956 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~-~~l--~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-~~~~kl~Dfg~a~ 956 (1088)
++|+||+++++|.+++... ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 9999999999999999764 445 8889999999999999999998 9999999999999986 6799999999987
Q ss_pred eecCCCCcccccccccccccCccccCCC--CCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCCCc
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTW--QATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 1033 (1088)
....... ......++..|+|||+.... .++.++||||+|+++|+|++|+.||..... ....|..... .
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~--~------ 228 (268)
T cd06624 158 RLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF--K------ 228 (268)
T ss_pred ecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh--c------
Confidence 6543221 22234578899999987654 478899999999999999999999975432 1111211111 0
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+.....++.+++.+|++.+|++||++.|++.
T Consensus 229 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 ---------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ---------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 000112233456888999999999999999999875
No 232
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.8e-33 Score=314.53 Aligned_cols=250 Identities=28% Similarity=0.426 Sum_probs=204.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
..+|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++. ++|||++++++++..++..++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE----NKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHh----CCCCCEeeEEEEEecCCEEEE
Confidence 367999999999999999999964 789999999986655555678889998886 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++++|.+++.+ ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+.......
T Consensus 94 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred eecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 9999999999999865 4589999999999999999999999 99999999999999999999999999987654322
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
. ......+++.|+|||...+..++.++||||+|+++|+|++|+.||........ ..... ....
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--~~~~~---~~~~----------- 232 (297)
T cd06656 170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLIA---TNGT----------- 232 (297)
T ss_pred c-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--eeeec---cCCC-----------
Confidence 1 22334678899999999888899999999999999999999999976432110 00000 0000
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+......+.+++.+|++.+|++||+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000112234456788999999999999999999987
No 233
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.9e-33 Score=310.82 Aligned_cols=247 Identities=30% Similarity=0.423 Sum_probs=202.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||.|++|.||+|++. +++.||+|++.... ......+.+|+++++. ++|+|++++++++.++...++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~~ 76 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQ----CRSPYITKYYGSFLKGSKLWI 76 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHH----cCCCCeeeeeEEEEECCeEEE
Confidence 36888899999999999999976 68899999987653 2334567889999886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
|+||+++++|.++++.. ++++..++.++.|++.|++|||++ +++||||+|+||++++++.++++|||.++......
T Consensus 77 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 77 IMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred EEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 99999999999999765 789999999999999999999999 99999999999999999999999999998775432
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.......++..|+|||+..+..++.++||||||+++|+|++|+.||....... ....... . .....
T Consensus 153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~----~-----~~~~~-- 218 (274)
T cd06609 153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIPK----N-----NPPSL-- 218 (274)
T ss_pred -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhhh----c-----CCCCC--
Confidence 12233467889999999988889999999999999999999999997654311 1111110 0 00000
Q ss_pred CCccccHH-HHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1043 SGLAEGAE-EMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... ....+.+++.+|+..||++||+++++++
T Consensus 219 -----~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 219 -----EGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -----cccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111 3456888999999999999999999975
No 234
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-33 Score=323.56 Aligned_cols=263 Identities=23% Similarity=0.316 Sum_probs=197.8
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG-- 877 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~-- 877 (1088)
..++|++.+.||+|+||.||+|.+. .++.||||++.... ......+.+|+.+++. ++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~ii~~~~~~~~~~~ 97 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC----VNHKNIIGLLNVFTPQKS 97 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHh----cCCCCccccceeeccccc
Confidence 3468999999999999999999975 68899999997642 2233567789998886 6799999999987643
Q ss_pred ----CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 878 ----SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 878 ----~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
...|+||||+++ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 98 LEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred ccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999975 78887754 478999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC----
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH---- 1029 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 1029 (1088)
+++..... .......+|..|+|||++.+..++.++||||+||++|||++|+.||.+.+. ...|..........
T Consensus 172 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 172 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHH
Confidence 99765322 222345689999999999998999999999999999999999999987543 11221111100000
Q ss_pred --------------CCC------ccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 --------------GPG------RAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 --------------~~~------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+. ......................+.+++.+|++.||.+|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000000000000011112356789999999999999999999986
No 235
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.8e-33 Score=306.22 Aligned_cols=247 Identities=27% Similarity=0.380 Sum_probs=199.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec-CCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD-GSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~-~~~~~ 881 (1088)
+|++.+.||+|++|.||+|..+ +++.||+|++..... ...+.+.+|++++++ ++|+|++++++.+.. +...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQ----LKHPNIVAYRESWEGEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHh----CCCCCeeeeeeeecCCCCEEE
Confidence 4888999999999999999976 578899999875432 233567888888886 679999999998764 44678
Q ss_pred EEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 882 LVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
+||||+++++|.+++... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 77 lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred EEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEec
Confidence 999999999999999763 3589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
... .......+++.|+|||+..+..++.++||||+|+++|+|++|+.||...+... +........
T Consensus 154 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~~~~~~~~~------------ 218 (257)
T cd08223 154 NQC-DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS--LVYRIIEGK------------ 218 (257)
T ss_pred ccC-CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHhcC------------
Confidence 322 22334567889999999998899999999999999999999999997654321 111111000
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+......+.+++.+|++.+|++||++.|+++
T Consensus 219 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 219 ----LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ----CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00112234467889999999999999999999975
No 236
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.5e-33 Score=309.54 Aligned_cols=251 Identities=26% Similarity=0.418 Sum_probs=198.6
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC----
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG---- 877 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~---- 877 (1088)
+++.|++.+.||+|+||.||+|... +++.||+|++.... .....+..|+.++.+.. +|||++++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~---~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYS---HHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhc---CCCCeeeEeeEEeecCCCC
Confidence 5678899999999999999999975 57889999987542 34567888998887632 699999999998753
Q ss_pred --CeEEEEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 878 --SEKILVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 878 --~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
...++||||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+|||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 4689999999999999999763 3689999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCC
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGR 1028 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1088)
++....... .......|+..|+|||++. ...++.++||||+||++|||++|+.||...............
T Consensus 157 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---- 231 (272)
T cd06637 157 VSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---- 231 (272)
T ss_pred Cceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC----
Confidence 998654322 1233456889999999875 346888999999999999999999999764432111111000
Q ss_pred CCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1029 HGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ... ......+..+.+++.+|++.+|.+||+++|+++
T Consensus 232 --~----~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 232 --P----APR-------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred --C----CCC-------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 000 001123356788999999999999999999875
No 237
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.6e-33 Score=310.71 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=201.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
+.|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+++++. +.|||++++++++..+...++|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILAT----CNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHh----CCCCcEeeeEEEEEeCCeEEEE
Confidence 57899999999999999999976 588999999987655555678889998886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 884 YEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
|||+++++|..++.+ ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~- 163 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT- 163 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc-
Confidence 999999999988754 45689999999999999999999998 9999999999999999999999999998764322
Q ss_pred CcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
........++..|+|||++. ...++.++|||||||++|||++|+.||...... +........ ...
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~---~~~----- 233 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKS---EPP----- 233 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--HHHHHHhcC---CCc-----
Confidence 11223456788999999874 445788999999999999999999999764321 111111100 000
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+.....++.+++.+|++.+|++||++.|+++
T Consensus 234 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 234 ------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00112233456888999999999999999999975
No 238
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.9e-33 Score=310.41 Aligned_cols=238 Identities=25% Similarity=0.360 Sum_probs=186.7
Q ss_pred eecccCceEEEEEEeCC-------------------------CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCc
Q 001384 812 IIGKGGFGTVYRGVLPD-------------------------GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPN 866 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~n 866 (1088)
.||+|+||.||+|.... ...||+|++..........+.+|+.+++. ++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~----l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQ----VSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhc----CCCCC
Confidence 69999999999997421 13588999876544444567888888875 68999
Q ss_pred eeEEeeEEecCCeEEEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC
Q 001384 867 LVTLYGWCLDGSEKILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG 945 (1088)
Q Consensus 867 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~ 945 (1088)
|+++++++.++...++||||+++|+|.+++.. ...+++..+..++.|+++||+|||++ +|+||||||+||+++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 99999999999999999999999999999865 45789999999999999999999999 999999999999998654
Q ss_pred -------CEEEeecccceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHH-hCCcCCCCCchhH
Q 001384 946 -------KALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELA-TGRRALEGGEECL 1016 (1088)
Q Consensus 946 -------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell-tg~~p~~~~~~~~ 1016 (1088)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.......
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3899999987644221 12346788999998765 56899999999999999984 7999997654322
Q ss_pred HHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1017 VEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
........ .. . +......+.+++.+|++.+|++||++.+|++.|+
T Consensus 230 ~~~~~~~~-----~~----~-----------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KERFYEKK-----HR----L-----------PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHhc-----cC----C-----------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11110000 00 0 1111246888999999999999999999998873
No 239
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.7e-33 Score=307.09 Aligned_cols=238 Identities=24% Similarity=0.369 Sum_probs=187.6
Q ss_pred ceecccCceEEEEEEeCC-------------CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 811 RIIGKGGFGTVYRGVLPD-------------GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
+.||+|+||.||+|.... ...||+|.+..........+.+|+.++.. ++||||+++++++..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~----l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQ----VSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHh----CCCCCEeeEEEEEecC
Confidence 368999999999998532 23588998876544444577888888876 6799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCC-------EEE
Q 001384 878 SEKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGK-------ALV 949 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~-------~kl 949 (1088)
...++||||+++|+|..+++.. ..+++..+++++.||+.||+|||++ +|+||||||+||+++.++. +++
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 9999999999999999998754 5689999999999999999999999 9999999999999987664 899
Q ss_pred eecccceeecCCCCcccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHH-hCCcCCCCCchhHHHHHHhhhccC
Q 001384 950 TDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELA-TGRRALEGGEECLVEWGRRVMGYG 1027 (1088)
Q Consensus 950 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 1027 (1088)
+|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||.......... ...
T Consensus 154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~--~~~--- 223 (262)
T cd05077 154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER--FYE--- 223 (262)
T ss_pred CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH--HHh---
Confidence 999998654321 2345778899999876 567899999999999999998 5888876543211111 000
Q ss_pred CCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1028 RHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
. . .. ........+.+++.+|++.||++||++.+|++.+
T Consensus 224 ~--~-~~------------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 G--Q-CM------------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred c--C-cc------------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 0 00 0111235678899999999999999999999875
No 240
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.8e-34 Score=344.88 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=197.8
Q ss_pred HHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec-
Q 001384 801 LKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD- 876 (1088)
Q Consensus 801 ~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~- 876 (1088)
....++|++.+.||+|+||+||+|++. .++.||+|++..... .....+..|+.++.. +.|||||+++++|..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~----L~HPNIVrl~d~f~de 84 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRE----LKHKNIVRYIDRFLNK 84 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHH----cCCCCcCeEEEEEEec
Confidence 345578999999999999999999976 577899998875432 234568899999997 679999999998864
Q ss_pred -CCeEEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCeEecCCCCCCEEEcCC---
Q 001384 877 -GSEKILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECY----PPIVHRDVKASNVLLDKE--- 944 (1088)
Q Consensus 877 -~~~~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~----~~ivH~DLkp~NIll~~~--- 944 (1088)
....|+||||+++|+|.+++.. ...+++..++.|+.||+.||+|||+... .+||||||||+||||+.+
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 3568999999999999999865 2469999999999999999999998521 259999999999999642
Q ss_pred --------------CCEEEeecccceeecCCCCcccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCcC
Q 001384 945 --------------GKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT--WQATTKGDVYSFGVLAMELATGRRA 1008 (1088)
Q Consensus 945 --------------~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p 1008 (1088)
+.+||+|||++..+... .......||+.|+|||++.. ..++.++|||||||++|||++|+.|
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred cccccccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 34899999999865422 22334578999999998743 4688999999999999999999999
Q ss_pred CCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1009 LEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
|..... ..+.......... .+ ......++.+||.+||+.+|.+||++.+++.
T Consensus 243 F~~~~~-~~qli~~lk~~p~-------lp----------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 243 FHKANN-FSQLISELKRGPD-------LP----------IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcCCc-HHHHHHHHhcCCC-------CC----------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 976433 1122111110000 00 0112356888999999999999999999983
No 241
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.8e-33 Score=309.68 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=198.0
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
|++.+.||+|+||.||+|.+. ++..+|+|.+........+.+.+|+++++. ++|||++++++++..+...++|||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~----l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILAS----CDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHH----CCCCCeeeEEEEEeeCCEEEEEEE
Confidence 677789999999999999976 577889999876544445678889999886 679999999999999999999999
Q ss_pred ecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 886 YMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 886 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
|+++++|.+++.+ ..++++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||++...... ..
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~ 158 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQ 158 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccc-cc
Confidence 9999999998765 45699999999999999999999999 9999999999999999999999999998764322 11
Q ss_pred ccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 965 VSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
......++..|+|||++. ...++.++||||+||++|||++|+.||........ ....... ....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~~---~~~~------ 227 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKS---EPPT------ 227 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH--HHHHhhc---CCCC------
Confidence 223456889999999873 44678899999999999999999999976443111 1111100 0000
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...+......+.+++.+|++.||.+||++.++++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 228 -----LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0012223457888999999999999999999875
No 242
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.3e-33 Score=310.91 Aligned_cols=255 Identities=29% Similarity=0.455 Sum_probs=204.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCc----EEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGR----EVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
++|++.+.||+|+||.||+|.++ +|+ .+|+|........ ....+.+|+.++.+ +.|||++++++++.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMAS----VDHPHVVRLLGICLS-S 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHh----CCCCCcceEEEEEec-C
Confidence 46888899999999999999964 333 5899988765432 34578889999986 679999999999887 7
Q ss_pred eEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 EKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..++||||+++|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++.
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 889999999999999999764 4689999999999999999999998 999999999999999999999999999987
Q ss_pred ecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 958 VSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 958 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
........ .....++..|+|||......++.++||||||+++||+++ |+.||.+... .++.........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~------- 229 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLEKGER------- 229 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhCCCC-------
Confidence 65332211 112234568999999888899999999999999999998 9999987543 222222221000
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.+.+..+...+.+++.+|+..||.+||++.++++.|+++.+
T Consensus 230 ---------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 ---------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01112233467888999999999999999999999998754
No 243
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.5e-33 Score=308.19 Aligned_cols=248 Identities=29% Similarity=0.435 Sum_probs=203.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
..|+..+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++ +.||||+++++++.++...++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~l 79 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ----CDSPYVTKYYGSYLKGTKLWI 79 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHh----CCCCCEeeEEEEEEECCEEEE
Confidence 35777889999999999999975 588999999875432 334568889999886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++|+|.+++.. .++++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 80 v~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 80 IMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 9999999999999865 4689999999999999999999998 99999999999999999999999999997764332
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
. ......++..|+|||+..+..++.++||||||+++|||++|+.||.......... ... ..
T Consensus 156 ~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--~~~----------------~~ 216 (277)
T cd06640 156 I-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF--LIP----------------KN 216 (277)
T ss_pred c-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh--hhh----------------cC
Confidence 1 2233467889999999988889999999999999999999999997654311110 000 00
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.........+..+.+++.+|++.+|++||++.|+++.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 217 NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0111234456778899999999999999999999764
No 244
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.5e-33 Score=315.59 Aligned_cols=193 Identities=25% Similarity=0.393 Sum_probs=160.2
Q ss_pred cceecccCceEEEEEEeC---CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec--CCeEEEEE
Q 001384 810 DRIIGKGGFGTVYRGVLP---DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD--GSEKILVY 884 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~--~~~~~lv~ 884 (1088)
.++||+|+||+||+|+.+ +++.||+|++.... ....+.+|++++++ ++||||+++++++.. +...++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRE----LKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHh----cCCCCCcceeeeEecCCCcEEEEEE
Confidence 468999999999999964 46789999987652 33457889999987 679999999998864 45688999
Q ss_pred EecCCCCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----cCCCCEEEee
Q 001384 885 EYMEGGSLEDIISDR---------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLL----DKEGKALVTD 951 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~---------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll----~~~~~~kl~D 951 (1088)
||+++ +|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 80 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 99965 898887532 2489999999999999999999999 99999999999999 4667899999
Q ss_pred cccceeecCCCCc--ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCC
Q 001384 952 FGLARVVSAGDSH--VSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGG 1012 (1088)
Q Consensus 952 fg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~ 1012 (1088)
||+++.+...... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9999876432211 2234578999999998765 46899999999999999999999999754
No 245
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.3e-33 Score=316.00 Aligned_cols=263 Identities=23% Similarity=0.270 Sum_probs=192.8
Q ss_pred ccceeccc--CceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 809 EDRIIGKG--GFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 809 ~~~~LG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
+.++||+| +|++||++..+ +|+.||+|++..... ...+.+.+|+++++. ++||||+++++++..++..++|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~----l~hpniv~~~~~~~~~~~~~lv 77 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKL----FNHPNIVPYRATFIADNELWVV 77 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHh----cCCCCeeeEEEEEEECCEEEEE
Confidence 45789999 78899999975 789999999976532 223457788888886 6899999999999999999999
Q ss_pred EEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINH 154 (327)
T ss_pred EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence 9999999999999653 4589999999999999999999998 9999999999999999999999999865433211
Q ss_pred CCc------ccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCc
Q 001384 962 DSH------VSTTIAGTVGYVAPEYGQT--WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 962 ~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1088)
... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.........+..............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccccc
Confidence 110 0122346678999998865 46899999999999999999999999764331111111100000000000
Q ss_pred -----------------ccc----------chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 -----------------AVI----------PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 -----------------~~~----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... +........+........+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000 000000000011223457889999999999999999999986
No 246
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.7e-33 Score=306.22 Aligned_cols=247 Identities=28% Similarity=0.438 Sum_probs=202.4
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|+||.||++... +++.||+|++.... ....+++.+|+.++++ ++||||+++++++.+.+..++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~l 76 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSN----MKHPNIVQYQESFEENGNLYI 76 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHh----CCCCCeeeeEeeecCCCeEEE
Confidence 5888999999999999999965 68899999987542 2234578889999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||||+++++|.+++.... .+++.+++.++.|++.|++|||++ +++|+||+|+||+++.++.++++|||.+.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 77 VMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 999999999999987643 578999999999999999999998 999999999999999999999999999986643
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
... ......++..|+|||+..+..++.++||||||+++|+|++|+.||...... +......
T Consensus 154 ~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~~~~~~~---------------- 214 (256)
T cd08218 154 TVE-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--NLVLKII---------------- 214 (256)
T ss_pred chh-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--HHHHHHh----------------
Confidence 221 223345788999999998888999999999999999999999999765331 1111111
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+.....+......+.+++.+|++.+|++||++.||++
T Consensus 215 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 215 RGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00111112234567889999999999999999999986
No 247
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-33 Score=313.30 Aligned_cols=250 Identities=26% Similarity=0.400 Sum_probs=199.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||.||+|++. +++.||+|.+.... ......+.+|++++.+ ++||||+++++++..++..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~~l 76 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHK----AVSPYIVDFYGAFFIEGAVYM 76 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHh----cCCCcHHhhhhheecCCeEEE
Confidence 36888999999999999999976 78999999887542 2223578889999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 883 VYEYMEGGSLEDIISDR---TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
||||+++++|.++++.. ..+++..+..++.|++.|+.|||+++ +|+||||||+||+++.++.++++|||.+..+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99999999999998763 36899999999999999999999743 89999999999999999999999999987653
Q ss_pred CCCCcccccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTW------QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1088)
.. ......++..|+|||.+.+. .++.++||||+||++|+|++|+.||........ .....
T Consensus 155 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~--------- 220 (286)
T cd06622 155 AS---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI--FAQLS--------- 220 (286)
T ss_pred CC---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH--HHHHH---------
Confidence 22 22334578899999987543 358899999999999999999999976432111 11100
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+.....+.....++.+++.+|++.+|++||++++++.
T Consensus 221 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 221 ----AIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ----HHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 00000111123335567889999999999999999999986
No 248
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.9e-33 Score=303.60 Aligned_cols=251 Identities=30% Similarity=0.484 Sum_probs=203.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|+||.||+|... +++.||+|.++..... ..+.+..|++++++ ++|+||+++++++...+..++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~----l~~~~i~~~~~~~~~~~~~~l 76 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLEL----LKHPNLVKYYGVEVHREKVYI 76 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHh----CCCCChhheeeeEecCCEEEE
Confidence 5888899999999999999965 6889999998866443 45678899999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
|+||+++++|.+++.....+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+.......
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 77 FMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred EEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999999998887799999999999999999999999 99999999999999999999999999998765433
Q ss_pred Ccccc---cccccccccCccccCCCC---CCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 963 SHVST---TIAGTVGYVAPEYGQTWQ---ATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 963 ~~~~~---~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
..... ...++..|+|||++.... ++.++||||||+++|+|++|+.||....... ........ .. ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~-~~----~~~~ 227 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGA-GH----KPPI 227 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhc-CC----CCCC
Confidence 22211 346788999999987766 8899999999999999999999997653211 11111110 00 0000
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+ ........+.+++.+|++.+|++||++.|++.
T Consensus 228 ~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 P---------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred C---------cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 11122456778999999999999999999874
No 249
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.7e-33 Score=311.68 Aligned_cols=260 Identities=27% Similarity=0.410 Sum_probs=201.4
Q ss_pred CHHHHHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEE
Q 001384 796 TYSDILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWC 874 (1088)
Q Consensus 796 ~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~ 874 (1088)
.++.+..+.++|++.+.||+|+||.||+|.+. +++.+|+|++.... ....++.+|+.+++.+. +||||+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~---~h~~i~~~~~~~ 84 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALS---DHPNVVKFYGMY 84 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHh---cCCCeeeeeeee
Confidence 34455567889999999999999999999975 67899999876532 23456788888887632 699999999987
Q ss_pred e-----cCCeEEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC
Q 001384 875 L-----DGSEKILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG 945 (1088)
Q Consensus 875 ~-----~~~~~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~ 945 (1088)
. .+...++||||+++++|.++++. ...+++..+..++.|++.|+.|||+. +++||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 4 34568999999999999998753 34688999999999999999999999 999999999999999999
Q ss_pred CEEEeecccceeecCCCCcccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHH
Q 001384 946 KALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-----WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWG 1020 (1088)
Q Consensus 946 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 1020 (1088)
.++++|||.++...... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||....... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-~~~ 239 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR-ALF 239 (286)
T ss_pred CEEEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-HHh
Confidence 99999999988764322 22234468899999998653 457889999999999999999999997653311 110
Q ss_pred HhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1021 RRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
. . ....... ...+......+.+++.+|++.||++||++.|+++.
T Consensus 240 ~-~---~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 240 K-I---PRNPPPT-----------LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred h-c---cccCCCc-----------ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 0 0000000 00111223568889999999999999999999864
No 250
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.8e-33 Score=310.82 Aligned_cols=267 Identities=23% Similarity=0.264 Sum_probs=205.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
++|++.+.||+|+||.||+|.++ +++.||+|+++... ....+.+.+|++++++ +.|+||+++++++..++..+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~ 76 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQ----LRHENIVNLKEAFRRKGRLY 76 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHh----cCCCCeeehhheEEECCEEE
Confidence 46889999999999999999976 57899999987542 2234678899999987 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||++++.+..+......+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+......
T Consensus 77 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 77 LVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9999999977777776667799999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccC----------CCC
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYG----------RHG 1030 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~----------~~~ 1030 (1088)
.........++..|+|||++.+. .++.++||||+|+++|+|++|+.||.+.......|........ ...
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 33233445678899999998877 8899999999999999999999999865442222211110000 000
Q ss_pred CCcc-ccchhhcCC--CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRA-VIPVVLLGS--GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~-~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.... ......... ....+.....++.+++.+|++.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 000000000 00001123577899999999999999999999875
No 251
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.7e-33 Score=310.45 Aligned_cols=264 Identities=25% Similarity=0.311 Sum_probs=197.1
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|++|.||+|+.+ +++.||+|++..... .....+.+|+.+++. ++|||++++++++.++...++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~~ 76 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKE----LQHPNIVCLQDVLMQESRLYL 76 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHh----cCCCCEeeeEEEEeeCCeEEE
Confidence 4788899999999999999975 689999999875422 223567889999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 883 VYEYMEGGSLEDIISDR---TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
||||++ ++|.++++.. ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 77 IFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFG 152 (285)
T ss_pred EEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence 999997 5899888643 4589999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhh--ccC-CCCC----
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVM--GYG-RHGP---- 1031 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~--~~~-~~~~---- 1031 (1088)
... .......++..|+|||.+.+ ..++.++||||+|+++|+|+||+.||.+..+....+..... ... ....
T Consensus 153 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 153 IPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred CCc-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchh
Confidence 321 12223356889999997754 45789999999999999999999999876442211111000 000 0000
Q ss_pred ---CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 ---GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+................++.+++.+|++.||++||++.+|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000000001123456788999999999999999999875
No 252
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=307.67 Aligned_cols=243 Identities=29% Similarity=0.375 Sum_probs=199.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
+.|+.-++||+|+||.||-++.+ +|+.+|.|++.+.... .+....+|-.++.+ +..+.||.+-..|+..+..
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~k----V~s~FiVslaYAfeTkd~L 260 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEK----VSSPFIVSLAYAFETKDAL 260 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHH----hccCcEEEEeeeecCCCce
Confidence 45777899999999999999965 7999999998765433 33456788888887 5688999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 881 ILVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
++|+..|.||+|.-.|...+ .+++..++.+|.+|+.||++||++ +||+||+||+|||+|+.|+++|+|+|+|..+
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999999998886655 699999999999999999999999 9999999999999999999999999999988
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhH--HHHHHhhhccCCCCCCcccc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECL--VEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
..+.. ....+||.+|||||+++.+.|+...|+||+||++|||+.|+.||....+-. .+..++..
T Consensus 338 ~~g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~------------ 403 (591)
T KOG0986|consen 338 PEGKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL------------ 403 (591)
T ss_pred CCCCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh------------
Confidence 75443 344589999999999999999999999999999999999999998754311 11111211
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
......+.....+..++-...+++||++|..-
T Consensus 404 -----~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 404 -----EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred -----cchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 11111133444566666668999999999743
No 253
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.1e-33 Score=314.94 Aligned_cols=254 Identities=28% Similarity=0.460 Sum_probs=200.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCc----EEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGR----EVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
++|+..+.||+|+||.||+|.+. +++ .||+|.+...... ...++.+|+.+++. ++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~----l~h~niv~~~~~~~~~- 81 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS----MDHPHLVRLLGVCLSP- 81 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHh----CCCCCcccEEEEEcCC-
Confidence 46788899999999999999864 443 5788888765322 23467889888886 6899999999998754
Q ss_pred eEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 EKILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..++++||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 4678999999999999987644 589999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCCcc-cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCch-hHHHHHHhhhccCCCCCCcc
Q 001384 958 VSAGDSHV-STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEE-CLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 958 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
........ .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.+... ...++.... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~------ 229 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG---ER------ 229 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC---CC------
Confidence 65332221 222345678999999988899999999999999999997 9999976432 222221110 00
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.+.+......+.+++.+|+..+|++||+++|+++.|+++.+
T Consensus 230 ----------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 230 ----------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00111233567889999999999999999999999998753
No 254
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.8e-33 Score=303.87 Aligned_cols=247 Identities=25% Similarity=0.393 Sum_probs=201.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-----cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-----EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
+|+..+.||+|+||+||+|... +++.||+|.+..... ...+.+..|+++++. ++|+|++++++++.++..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~ 76 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSK----LQHPNIVQYLGTEREEDN 76 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHh----cCCCCchheeeeEecCCe
Confidence 4778899999999999999976 789999999865431 133568889999886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.++||||+++++|.+++.+...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+....
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999999998888899999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCcccccccccccccCccccCCCC-CCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQ-ATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
... ......++..|+|||...... ++.++|+||+|+++|+|++|+.||....+....+..... .. .
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~~----~----- 220 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS--KE----L----- 220 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc--cc----C-----
Confidence 322 223456788999999877666 899999999999999999999999765431111111100 00 0
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...+......+.+++.+|++.+|.+||++.++++
T Consensus 221 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0011223456788999999999999999999875
No 255
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.2e-33 Score=312.33 Aligned_cols=265 Identities=24% Similarity=0.349 Sum_probs=202.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
++|++.+.||+|+||.||+|.++ +++.||+|++...... ..+.+.+|+++++. ++||||+++++++..+...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~ 76 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQ----LRHENLVNLIEVFRRKKRLY 76 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHh----cCCcchhhHHHhcccCCeEE
Confidence 46888999999999999999986 5899999998754322 24567889999886 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+||||+++++|.++......+++.++..++.|++.|++|||+. +++||||+|+||++++++.++++|||++......
T Consensus 77 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 77 LVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred EEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999999999999887776799999999999999999999999 9999999999999999999999999998875433
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC-CCccccc--
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG-PGRAVIP-- 1037 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 1037 (1088)
. .......++..|+|||+..+ ..++.++||||||+++|||++|+.||..... ...+.+......... .......
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 154 G-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred c-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHhCCCchhhHHHhccc
Confidence 2 22334567889999998764 4578899999999999999999999976432 222211110000000 0000000
Q ss_pred hhh----cCC------CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1038 VVL----LGS------GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1038 ~~~----~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... ... ...........+.+++.+|++.+|++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 000 00001233567889999999999999999999875
No 256
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5e-33 Score=311.78 Aligned_cols=265 Identities=22% Similarity=0.300 Sum_probs=198.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||.||+|+++ +++.||+|.+..... .....+.+|+.+++. ++||||+++++++..+...++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD----LKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHh----cCCCCcceEEEEEecCCeEEE
Confidence 56889999999999999999976 678999999875432 233467789999986 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||++ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 999997 4999888654 4689999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCCCCCcccc---
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRHGPGRAVI--- 1036 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--- 1036 (1088)
.. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... .....................
T Consensus 158 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 158 TK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred CC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence 21 1223456889999998654 45788999999999999999999999865431 111111111111100000000
Q ss_pred -------chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1037 -------PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1037 -------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+.................+.+++.+|++.||.+||+++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000001123456788999999999999999999986
No 257
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.6e-33 Score=305.91 Aligned_cols=245 Identities=31% Similarity=0.455 Sum_probs=197.7
Q ss_pred CCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
++|++.+.||+|+||.||+|.. +++.||+|++... .....+.+|+.++++ ++|||++++++++..+ ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTK----LHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHh----CCCCCcCeEEEEEcCC-CcEEEE
Confidence 3588899999999999999985 5788999998754 234578899999886 6799999999998765 478999
Q ss_pred EecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 885 EYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||+++++|.+++.... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 9999999999997643 589999999999999999999998 9999999999999999999999999998764321
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
......+..|+|||.+.+..++.++||||+|+++|||++ |+.||...... +..........
T Consensus 154 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~------------- 215 (254)
T cd05083 154 ---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKECVEKGYR------------- 215 (254)
T ss_pred ---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhCCCC-------------
Confidence 112234568999999988899999999999999999997 99999765431 12122110000
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
...+...+..+.+++.+|++.+|++||+++|+++.|++
T Consensus 216 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 ---MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 00112234577889999999999999999999999874
No 258
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5.5e-33 Score=305.60 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=196.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-----cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec--
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-----EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD-- 876 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~-- 876 (1088)
.+|+..+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++ ++||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~ 77 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKN----LQHERIVQYYGCLRDRA 77 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHH----cCCCCeeeEEEEEEcCC
Confidence 36888999999999999999975 688999998864321 122457889999886 679999999998875
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
+...+++|||+++++|.+++.....+++...+.++.|++.||+|||+. +|+||||+|+||+++.++.++|+|||+++
T Consensus 78 ~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 78 EKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 357789999999999999998877899999999999999999999998 99999999999999999999999999987
Q ss_pred eecCCCC--cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 957 VVSAGDS--HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
....... .......++..|+|||.+.+..++.++||||+||++|||++|+.||...... ... ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-~~~-~~~~~~~~------ 226 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-AAI-FKIATQPT------ 226 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-HHH-HHHhcCCC------
Confidence 6532111 1112345788999999998888999999999999999999999999865321 111 11110000
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+......+.+++ +|+..+|++||+++||++
T Consensus 227 ---------~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 ---------NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---------CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0011222334556666 688899999999999975
No 259
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.8e-33 Score=309.18 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=204.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++. ++||||+++++++......++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHE----CRSPYIVSFYGAFLNENNICM 80 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHH----cCCCCcceEeeeEecCCEEEE
Confidence 46888899999999999999975 68899999887543 2335678899999986 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++++|.+++...+.+++..+..++.+++.|+.|||+.. +++||||+|+||+++.++.++|+|||++......
T Consensus 81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 9999999999999988888999999999999999999999742 8999999999999999999999999998654321
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh---------HHHHHHhhhccCCCCCCc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC---------LVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~ 1033 (1088)
......++..|+|||++.+..++.++|||||||++|+|++|+.||...... ..++.......
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 228 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE------- 228 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-------
Confidence 122356889999999988889999999999999999999999999854321 11121221100
Q ss_pred cccchhhcCCCccc-cHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1034 AVIPVVLLGSGLAE-GAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
..... ....+..+.+++.+|++.||++||++.|+++..
T Consensus 229 ---------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 229 ---------PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred ---------cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00000 112445788999999999999999999999753
No 260
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=315.81 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=206.0
Q ss_pred CCCCccceecccCceEEEEEEeCCCc-EEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPDGR-EVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
+.|+++.-||-|+||.||+|..++.. ..|.|++.....+.-+++.-|++++.. +.||+||++++.|+.++..+|.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~----CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAE----CDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhc----CCChHHHHHHHHHhccCceEEE
Confidence 44677788999999999999987544 456787776655566789999999997 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 884 YEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
.|||.||-+..++-. ...+++.++..+++|++.||.|||++ .|||||||+-|||++-+|.++++|||.+..... .
T Consensus 108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t 183 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-T 183 (1187)
T ss_pred EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh-H
Confidence 999999999987755 45699999999999999999999999 999999999999999999999999998765432 2
Q ss_pred CcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 963 SHVSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
......+.||++|||||+.. ..+|++++||||||+.+.||..+.+|.....+.-+ .+...... +
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV-----llKiaKSe------P 252 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----LLKIAKSE------P 252 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH-----HHHHhhcC------C
Confidence 33456789999999999744 56899999999999999999999999876554221 11111111 1
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.-...|......+.+++++|+..+|..||+++++++
T Consensus 253 -----PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 253 -----PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -----CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 112346778889999999999999999999999875
No 261
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.2e-33 Score=304.35 Aligned_cols=250 Identities=24% Similarity=0.311 Sum_probs=188.9
Q ss_pred ceecccCceEEEEEEeCC---CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLPD---GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|...+ +..+|+|+++.... .....+.+|+.++++ ++||||+++++++.+....++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~lv~e~ 76 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRS----LQHSNLLQCLGQCTEVTPYLLVMEF 76 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHh----CCCCCEeeEEEEEcCCCCcEEEEEC
Confidence 358999999999998643 45799999876532 233578889999886 6799999999999999999999999
Q ss_pred cCCCCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 887 MEGGSLEDIISDRT-----RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+++|+|.++++... ..++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 99999999997532 356778889999999999999999 9999999999999999999999999998754332
Q ss_pred CCcc-cccccccccccCccccCCC-------CCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCC
Q 001384 962 DSHV-STTIAGTVGYVAPEYGQTW-------QATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 962 ~~~~-~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1088)
.... .....++..|+|||++... .++.++||||||+++|||++ |+.||........ ....... ..
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~-----~~ 227 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVRE-----QQ 227 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhhc-----cc
Confidence 2211 1234567889999987542 35789999999999999996 9999976543211 1111110 00
Q ss_pred ccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1033 RAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
.....+.. .......+.+++.+|+ .+|++||+++||++.|+
T Consensus 228 ~~~~~~~~-------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 228 LKLPKPRL-------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCCcc-------CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000000 1112345777888998 58999999999999875
No 262
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.9e-33 Score=309.32 Aligned_cols=252 Identities=27% Similarity=0.397 Sum_probs=202.1
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
.++|++.+.||+|+||.||+|.+. ++..||+|++..........+..|++++++ ++|||++++++++..+...++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSE----CKHPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHh----CCCCceeEEEEEEecCCeEEE
Confidence 356889999999999999999975 688999999976644455678899999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++++|.+++... ..+++.+++.++.|++.|+.|||++ +|+|+||+|+||+++.++.++|+|||.+......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 99999999999998764 4699999999999999999999999 9999999999999999999999999988654322
Q ss_pred CCcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcccc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVI 1036 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1088)
. .......++..|+|||.+. ...++.++||||+|+++|||++|+.||....... ...... ....
T Consensus 157 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~~~~---~~~~----- 225 (280)
T cd06611 157 L-QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLLKIL---KSEP----- 225 (280)
T ss_pred c-cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHHHHh---cCCC-----
Confidence 1 1223456888999999864 3457889999999999999999999997653311 111111 0000
Q ss_pred chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1037 PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.....+......+.+++.+|++.+|.+||++.++++.
T Consensus 226 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 ------PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ------CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0001122334578889999999999999999999763
No 263
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.4e-33 Score=308.80 Aligned_cols=239 Identities=26% Similarity=0.400 Sum_probs=188.2
Q ss_pred ceecccCceEEEEEEeCC--------CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 811 RIIGKGGFGTVYRGVLPD--------GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+.||+|+||.||+|..+. ..+||+|.+........+.+.+|+.+++. ++|||++++++++..+...++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~----~~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQ----LSHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHh----CCCCChhheeeEEEeCCCcEE
Confidence 369999999999998642 23488888866544445678888888886 679999999999999899999
Q ss_pred EEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCC--------EEEeecc
Q 001384 883 VYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGK--------ALVTDFG 953 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~--------~kl~Dfg 953 (1088)
||||+++|+|.++++... .+++..++.++.||+.|++|||+. +|+||||||+||+++.++. ++++|||
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 999999999999997654 589999999999999999999999 9999999999999987765 6899999
Q ss_pred cceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCC-cCCCCCchhHHHHHHhhhccCCCCC
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGR-RALEGGEECLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1088)
.+..... .....++..|+|||.+.+ ..++.++||||||+++|||++|. .||........ ..... .
T Consensus 154 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~--~~~~~---~--- 220 (258)
T cd05078 154 ISITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK--LQFYE---D--- 220 (258)
T ss_pred cccccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH--HHHHH---c---
Confidence 8865432 223457889999998876 45799999999999999999995 55544322111 11000 0
Q ss_pred CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1032 GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
. ...+.....++.+++.+|++.||++||+++|+++.|+
T Consensus 221 -~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 -R-----------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -c-----------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0011122356889999999999999999999999863
No 264
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.5e-33 Score=310.28 Aligned_cols=246 Identities=30% Similarity=0.450 Sum_probs=199.8
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.|+..+.||+|+||.||+|.+. +++.||+|.+..... ...+.+..|++++++ ++||||+++++++..+...++|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ----CDSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHc----CCCCccHhhhcccccCCceEEE
Confidence 3666788999999999999865 578899999875432 233568899999986 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++++|.+++.. ..+++..++.++.|++.|++|||++ +++|+||+|+||++++++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06642 81 MEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred EEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc-
Confidence 999999999999865 4689999999999999999999998 99999999999999999999999999987654322
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
.......++..|+|||++.+..++.++||||||+++|||++|+.||.........+ ... .. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--~~~---~~-------------~ 217 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF--LIP---KN-------------S 217 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh--hhh---cC-------------C
Confidence 12233467889999999998899999999999999999999999997543311111 000 00 0
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...........+.+++.+|++.+|++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00112234467889999999999999999999997
No 265
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=312.89 Aligned_cols=242 Identities=29% Similarity=0.410 Sum_probs=200.1
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
|...+-||+|+||.||-|++. +.+.||||++.-.. .+...++..|+..+.+ +.|||++.+-|||..+...|+
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~----l~HPntieYkgCyLre~TaWL 103 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQ----LRHPNTIEYKGCYLREHTAWL 103 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHh----ccCCCcccccceeeccchHHH
Confidence 555688999999999999975 67889999997543 3445678899999997 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||||-| +-.|++.- ..++.+.++..|..+.+.||+|||+. +.||||||+-|||+++.|.||++|||.|..+.+
T Consensus 104 VMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P- 178 (948)
T KOG0577|consen 104 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP- 178 (948)
T ss_pred HHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc-
Confidence 9999955 88888864 34689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQ---TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
...++||+.|||||++. .+.|+-++||||+|++..|+...++|+...+....-| +... .. .+
T Consensus 179 ----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY-HIAQ----Ne------sP 243 (948)
T KOG0577|consen 179 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQ----NE------SP 243 (948)
T ss_pred ----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH-HHHh----cC------CC
Confidence 34578999999999753 5789999999999999999999999987765421111 1110 00 00
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+ ...+....+.+++..|+++-|.+|||.+++++
T Consensus 244 tL------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 244 TL------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CC------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11 13456778889999999999999999999875
No 266
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=8.8e-33 Score=310.36 Aligned_cols=255 Identities=22% Similarity=0.305 Sum_probs=202.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|... .++.||+|.+..... .....+.+|+++++. ++||||+++++.+..++..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~ 76 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTF----AENPFVVSMFCSFETKRHL 76 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHh----CCCCCeeeeEEEEecCCEE
Confidence 36888999999999999999976 578999999876532 223467788888886 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++++|.++++..+.+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 77 CMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999999998888899999999999999999999998 999999999999999999999999998864211
Q ss_pred CCC--------------cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhcc
Q 001384 961 GDS--------------HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 961 ~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
... .......++..|+|||.+....++.++||||||+++|||++|..||.+.... ++.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~--~~~~~~~~~ 231 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--ELFGQVISD 231 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhc
Confidence 000 0111245678899999988888999999999999999999999999765331 111111100
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.... + ......+..+.+++.+|++.||++||++.++.+.++.
T Consensus 232 ~~~~------~--------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 232 DIEW------P--------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ccCC------C--------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0000 0 0011234567899999999999999998777776665
No 267
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=292.80 Aligned_cols=240 Identities=28% Similarity=0.333 Sum_probs=201.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHH---HHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGERE---FRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|...++||+|.||+|-.++-+ +++.+|+|+++++....+.+ ...|-++++. .+||.+..+-..|+..+..
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~----~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQN----CRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHh----ccCcHHHHhhhhhccCceE
Confidence 56888899999999999999965 79999999999987665544 3457778876 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+||||+.||.|.-.+.+.+.+++..++.+...|+.||.|||++ +||+||+|.+|.|+|.+|++||+|||+++.--
T Consensus 244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I- 319 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI- 319 (516)
T ss_pred EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc-
Confidence 99999999999999999888899999999999999999999999 99999999999999999999999999997532
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
........++||+.|.|||++....|+.++|+|.+||++|||++|+.||...+.... + +- +
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL-F-----------------eL-I 380 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL-F-----------------EL-I 380 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH-H-----------------HH-H
Confidence 223345678999999999999999999999999999999999999999987543111 0 00 0
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCC
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARP 1071 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1071 (1088)
..+....|.....+...++...+.+||.+|.
T Consensus 381 l~ed~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 381 LMEDLKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred HhhhccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 1111122344445677788899999999997
No 268
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.6e-36 Score=329.49 Aligned_cols=365 Identities=27% Similarity=0.378 Sum_probs=285.1
Q ss_pred CCCCcEEEccCccccccccccCcccceecccCcccccccccccccCCCccCEEEcCCCcccccCcccccCCCCCcEEEcc
Q 001384 197 CLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEFIGDFPGEVSNCRNLVVLNLF 276 (1088)
Q Consensus 197 l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 276 (1088)
++-.+-.|+++|.++|.-+ +.....++++++|.|...++. .+|+.++.+.+|++|.++
T Consensus 6 LpFVrGvDfsgNDFsg~~F---------------------P~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~ 63 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRF---------------------PHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMA 63 (1255)
T ss_pred cceeecccccCCcCCCCcC---------------------chhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhh
Confidence 3445667788887775322 222334456666666666655 667777777777777777
Q ss_pred CccccCCCccccCCCCCCCEEeCCCCcCC-ccCcccccCCCCCcEEEcCCCcCCCchhHhhhcccccceeecCcCcccCC
Q 001384 277 GNNFSGPIPAEIGSISGLEALFLGKNNFL-SVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDG 355 (1088)
Q Consensus 277 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~ 355 (1088)
+|++. .+-..+..++.|+.+.+.+|++. .-+|..+..+..|+.||||+|++. ..|..+..-+++-.|+|++|+ ++.
T Consensus 64 HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~-Iet 140 (1255)
T KOG0444|consen 64 HNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNN-IET 140 (1255)
T ss_pred hhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCc-ccc
Confidence 77776 55566677777777777777664 236677777777777777777776 445556666666677777776 444
Q ss_pred CCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCCcccCCCCCCcEEEccCCcCC-CCCCcccc
Q 001384 356 MNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELT-GPIPPSIG 434 (1088)
Q Consensus 356 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~ 434 (1088)
++...|.++..|-+||||+|++. .+|+.+..+..|++|.|++|.+...--..+..|++|++|.+++.+=+ .-+|.++.
T Consensus 141 IPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld 219 (1255)
T KOG0444|consen 141 IPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLD 219 (1255)
T ss_pred CCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchh
Confidence 55556667888889999999998 78889999999999999999886544444556888899999987632 26899999
Q ss_pred CCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCchhhccCCCCCccccccccCCcccccCCcccccccc
Q 001384 435 NLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPEVMTIGRNARPTFEANQRNGERTIAGSSECLSMKR 514 (1088)
Q Consensus 435 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 514 (1088)
.|.+|..+||+.|.+. .+|..+.++++|+.|+||+|+++ .+...+
T Consensus 220 ~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~--------------------------------- 264 (1255)
T KOG0444|consen 220 DLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTE--------------------------------- 264 (1255)
T ss_pred hhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccH---------------------------------
Confidence 9999999999999998 89999999999999999999998 221111
Q ss_pred ccCCCCCCCcceeeehhccccchhhhhcccCCcccccccCCCcccceeeeceEEccCCccccccCcccccCCCccEEecc
Q 001384 515 WIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPVCLPGLASRTFQITGYLQLSGNQLSGELSPDIGKLQNFSMVHLG 594 (1088)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 594 (1088)
. ..+.+++|+||.|+|+ .+|..+.+|++|+.|.+.
T Consensus 265 ----------------------~----------------------~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n 299 (1255)
T KOG0444|consen 265 ----------------------G----------------------EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYAN 299 (1255)
T ss_pred ----------------------H----------------------HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhc
Confidence 1 1234578999999999 899999999999999999
Q ss_pred ccccc-cCCCCcccCc-cceEEEccCCcccccCCccccCCccCcEEEccccccCCcCCcccccccccceeeccCCCC
Q 001384 595 FNQFD-GKLPSQFDQL-PLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPL 669 (1088)
Q Consensus 595 ~N~l~-g~~p~~~~~l-~l~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 669 (1088)
+|+|+ .-||+.+|.+ .|+++..++|.+. .+|+.++.+..|+.|.|+.|+|- ++|+.+--++.|+.|||..|+=
T Consensus 300 ~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 300 NNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred cCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 99986 3499999999 7999999999998 99999999999999999999998 8999999999999999999974
No 269
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7.2e-33 Score=305.26 Aligned_cols=253 Identities=25% Similarity=0.426 Sum_probs=199.8
Q ss_pred CCCccceecccCceEEEEEEeCC--CcEEEEEEccccCc----------cchHHHHHHHHHHhCCCCCCCCCceeEEeeE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPD--GREVAVKKLQREGL----------EGEREFRAEMEVLSGNGFGWPHPNLVTLYGW 873 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~ 873 (1088)
.|++.+.||+|+||.||+|.++. ++.+|+|.+..... ....++..|+.++.+ .++||||++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~---~~~h~~i~~~~~~ 77 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKE---QLRHPNIVRYYKT 77 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhh---cCCCCCeeeEEee
Confidence 37788999999999999999764 68899998864321 112346677777764 2589999999999
Q ss_pred EecCCeEEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEE
Q 001384 874 CLDGSEKILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALV 949 (1088)
Q Consensus 874 ~~~~~~~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl 949 (1088)
+.+++..++||||+++++|.+++.. ...+++..++.++.|++.|+.|||+.. +++|+||+|+||+++.++.+|+
T Consensus 78 ~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l 155 (269)
T cd08528 78 FLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTI 155 (269)
T ss_pred EccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEE
Confidence 9999999999999999999998743 346899999999999999999999631 8999999999999999999999
Q ss_pred eecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC
Q 001384 950 TDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH 1029 (1088)
Q Consensus 950 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1088)
+|||.+....... ......++..|+|||...+..++.++||||||+++|+|++|+.||..... ............
T Consensus 156 ~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--~~~~~~~~~~~~- 230 (269)
T cd08528 156 TDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--LSLATKIVEAVY- 230 (269)
T ss_pred ecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--HHHHHHHhhccC-
Confidence 9999998754332 23445688899999999888899999999999999999999999976433 111111110000
Q ss_pred CCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1030 GPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
.. . ........+.+++.+|++.||++||++.|+..++++
T Consensus 231 ~~-------~-------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 231 EP-------L-------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred Cc-------C-------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 00 0 011223568889999999999999999999998863
No 270
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.4e-33 Score=306.94 Aligned_cols=247 Identities=33% Similarity=0.521 Sum_probs=195.8
Q ss_pred ceecccCceEEEEEEeCC-------CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 811 RIIGKGGFGTVYRGVLPD-------GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+.||+|+||.||+|+..+ ++.+|+|.+..... .....+.+|+.+++. ++||||+++++++......++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~~ 76 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSN----FNHPNIVKLLGVCLLNEPQYI 76 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHh----cCCCCeeeEeeeecCCCCeEE
Confidence 368999999999998642 25799998875432 334578899999986 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-----CEEEe
Q 001384 883 VYEYMEGGSLEDIISDR-------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-----KALVT 950 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-----~~kl~ 950 (1088)
||||+++++|.++++.. ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .++++
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEEC
Confidence 99999999999999642 2478899999999999999999998 999999999999999887 89999
Q ss_pred ecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCC
Q 001384 951 DFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGR 1028 (1088)
Q Consensus 951 Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1088)
|||++......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ...... .
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~~~~~~---~ 228 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VLQHVT---A 228 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--HHHHHh---c
Confidence 99998765432211 1223345678999999998899999999999999999998 999997543311 111110 0
Q ss_pred CCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHh
Q 001384 1029 HGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIK 1082 (1088)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1082 (1088)
+.....+...+..+.+++.+|+..+|.+||++++|++.|++
T Consensus 229 -------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 229 -------------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred -------------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00001122344678899999999999999999999999874
No 271
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=9.2e-33 Score=308.15 Aligned_cols=260 Identities=28% Similarity=0.398 Sum_probs=202.7
Q ss_pred cCHHHHHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeE
Q 001384 795 FTYSDILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGW 873 (1088)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~ 873 (1088)
+++.++..+.++|++.+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.++.++. +|||+++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~---~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLP---NHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhc---CCCCeEEEEEE
Confidence 455666677889999999999999999999975 68899999987542 23456778888887632 79999999999
Q ss_pred EecC-----CeEEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC
Q 001384 874 CLDG-----SEKILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE 944 (1088)
Q Consensus 874 ~~~~-----~~~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~ 944 (1088)
+... ...++||||+++++|.++++. ...+++..++.++.|++.||+|||+. +++||||||+||+++.+
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 8753 358999999999999998863 35689999999999999999999998 99999999999999999
Q ss_pred CCEEEeecccceeecCCCCcccccccccccccCccccCCC-----CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHH
Q 001384 945 GKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTW-----QATTKGDVYSFGVLAMELATGRRALEGGEECLVEW 1019 (1088)
Q Consensus 945 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~ 1019 (1088)
+.+||+|||.+........ ......++..|+|||.+... .++.++||||+||++|||++|+.||.........
T Consensus 165 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~- 242 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL- 242 (291)
T ss_pred CCEEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH-
Confidence 9999999999876543221 12234678899999987543 3688999999999999999999999765431110
Q ss_pred HHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1020 GRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.... .... .. ...+......+.+++.+|++.+|++||++.|+++
T Consensus 243 -~~~~---~~~~-~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 -FKIP---RNPP-PT----------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -HHHh---cCCC-CC----------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0110 0000 00 0012233456889999999999999999999975
No 272
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1e-32 Score=302.22 Aligned_cols=237 Identities=27% Similarity=0.431 Sum_probs=189.3
Q ss_pred ceecccCceEEEEEEeCCCc-----------EEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 811 RIIGKGGFGTVYRGVLPDGR-----------EVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
+.||+|+||.||+|.+++.. .+++|.+...... ...+.+|+.++++ ++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~----l~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQ----LSHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHc----CCCcchhheeeEEec-CC
Confidence 46899999999999976432 5788877655332 5678889999886 689999999999888 77
Q ss_pred EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-------CEEEee
Q 001384 880 KILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-------KALVTD 951 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-------~~kl~D 951 (1088)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+|++|
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 899999999999999998765 789999999999999999999998 999999999999999888 799999
Q ss_pred cccceeecCCCCcccccccccccccCccccCCC--CCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCC
Q 001384 952 FGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTW--QATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGR 1028 (1088)
Q Consensus 952 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1088)
||++..... .....++..|+|||++... .++.++||||||+++|||++ |..||..... .++..... .
T Consensus 152 fg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~~~~~~~~---~ 221 (259)
T cd05037 152 PGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--SEKERFYQ---D 221 (259)
T ss_pred CCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--hhHHHHHh---c
Confidence 999886543 2233466789999998776 78999999999999999999 5777765432 11111111 0
Q ss_pred CCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1029 HGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
.. .. +......+.+++.+|++.+|++||++.||++.|+
T Consensus 222 ~~----~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 QH----RL-----------PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CC----CC-----------CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 00 0001167889999999999999999999998873
No 273
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=9.3e-33 Score=303.40 Aligned_cols=251 Identities=28% Similarity=0.453 Sum_probs=207.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|++|.||+|..+ +++.||||++..... .....+..|++.+.+ ++|+|++++++++..+...++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~l 76 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRS----CESPYVVKCYGAFYKEGEISI 76 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHh----cCCCCeeeEEEEEccCCeEEE
Confidence 36888999999999999999987 589999999887643 345678899999886 579999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHH-ECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++++|.+++.....+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+......
T Consensus 77 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 77 VLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 99999999999999888889999999999999999999999 8 9999999999999999999999999999876433
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCCCccccchhh
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
.. ......++..|+|||...+..++.++||||||+++|+|++|+.||..... ...+....... .
T Consensus 154 ~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----~---------- 218 (264)
T cd06623 154 LD-QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD----G---------- 218 (264)
T ss_pred CC-cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc----C----------
Confidence 22 22345678899999999988999999999999999999999999977642 11111111110 0
Q ss_pred cCCCccccHH-HHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1041 LGSGLAEGAE-EMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1041 ~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.....+.. .+..+.+++.+|++.+|++||++.|+++.
T Consensus 219 --~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 219 --PPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00011112 44678899999999999999999999874
No 274
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.9e-33 Score=303.42 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=197.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--c---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC-
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--L---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG- 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~- 877 (1088)
.+|++.+.||+|+||.||+|.+. +++.||+|++.... . ...+.+.+|++++++ ++||||+++++++.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~ 77 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKN----LLHERIVQYYGCLRDPM 77 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHh----cCCCCeeeEEeEeccCC
Confidence 46888999999999999999975 58999999886431 1 112467889999886 6799999999988764
Q ss_pred -CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 -SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++||||+++++|.+++.....+++..+.+++.|++.||+|||++ +++|+||||+||+++.++.++|+|||.+.
T Consensus 78 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 78 ERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred CceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 46789999999999999998877889999999999999999999999 99999999999999999999999999987
Q ss_pred eecCCCCc--ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 957 VVSAGDSH--VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
........ ......++..|+|||...+..++.++||||||+++|||++|+.||....... ....... . .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~--~---~--- 225 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-AIFKIAT--Q---P--- 225 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-HHHHHhc--C---C---
Confidence 65422111 1223457889999999888889999999999999999999999997643211 1111110 0 0
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+......+.+++.+|+. +|++||+++||++
T Consensus 226 --------~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 --------TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred --------CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0011133445677888889985 8999999999875
No 275
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.8e-33 Score=308.03 Aligned_cols=243 Identities=27% Similarity=0.355 Sum_probs=200.9
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|++++++ +.||||+++++++.++...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~ 76 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQS----IRHPFLVNLYGSFQDDSNL 76 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh----CCCCCccceeeEEEcCCeE
Confidence 36888999999999999999976 689999999875432 234567889999986 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||||+++++|.++++....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++.....
T Consensus 77 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 77 YLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999999998888899999999999999999999998 999999999999999999999999999887643
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
. .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ...+ ..... .
T Consensus 154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~-~~~~~----~---------- 213 (290)
T cd05580 154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-IQIY-EKILE----G---------- 213 (290)
T ss_pred C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHH-HHHhc----C----------
Confidence 3 2344688999999998888889999999999999999999999976542 1111 11110 0
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVL 1077 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil 1077 (1088)
....+......+.+++.+|++.||.+|| +++|++
T Consensus 214 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 214 ---KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ---CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 0001122245778899999999999999 666665
No 276
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.3e-32 Score=303.67 Aligned_cols=253 Identities=26% Similarity=0.427 Sum_probs=198.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc----------chHHHHHHHHHHhCCCCCCCCCceeEEeeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE----------GEREFRAEMEVLSGNGFGWPHPNLVTLYGWC 874 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~ 874 (1088)
+|.+.+.||+|+||.||+|... +++.||+|.+...... ..+.+..|+.+++. ++|||++++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~ 77 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKD----LDHLNIVQYLGFE 77 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHh----cCCCCcceEEEEe
Confidence 4778899999999999999865 6889999988642111 11356788888886 6799999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccc
Q 001384 875 LDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGL 954 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~ 954 (1088)
......++||||+++++|.+++++...+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 78 TTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 99999999999999999999998888899999999999999999999998 999999999999999999999999999
Q ss_pred ceeecCCCCc-ccccccccccccCccccCCCC--CCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC
Q 001384 955 ARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQ--ATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 955 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1088)
++........ ......++..|+|||...... ++.++||||+|+++|++++|..||.........+ .......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~~~~~--- 229 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF--KLGNKRS--- 229 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH--Hhhcccc---
Confidence 8765432111 123356788999999877654 7899999999999999999999997543321111 1100000
Q ss_pred CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...++.. ........+.+++.+|+++||++||+++||++
T Consensus 230 -~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 -APPIPPD-------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred -CCcCCcc-------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0000100 01123467888999999999999999999875
No 277
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.3e-33 Score=305.05 Aligned_cols=251 Identities=24% Similarity=0.411 Sum_probs=202.1
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc------chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE------GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
+|+..+.||+|++|.||+|... +++.||+|++...... ..+.+..|++++++ ++|+|++++++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~ 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMAR----LNHPHIIRMLGATCEDS 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHH----cCCCceehhhceeccCC
Confidence 4778899999999999999964 6899999998754311 23568889999986 68999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-CEEEeeccccee
Q 001384 879 EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-KALVTDFGLARV 957 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-~~kl~Dfg~a~~ 957 (1088)
..++||||+++++|.+++.+..++++..+..++.|++.|++|||++ +++|+||+|+||+++.++ .++|+|||.+..
T Consensus 77 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 77 HFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred eEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999999998888899999999999999999999999 999999999999998776 599999999877
Q ss_pred ecCCCC---cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCCCc
Q 001384 958 VSAGDS---HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 958 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 1033 (1088)
...... .......++..|+|||...+..++.++||||+|+++|+|++|..||..... ...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-------- 225 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-------- 225 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc--------
Confidence 653211 112234678899999998888899999999999999999999999975432 11111111100
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+.....++.+++.+|++.+|++||++.|+++
T Consensus 226 -------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 226 -------ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -------cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00011123344567889999999999999999999974
No 278
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.7e-33 Score=306.23 Aligned_cols=252 Identities=27% Similarity=0.435 Sum_probs=197.4
Q ss_pred CCccceecccCceEEEEEEeC----CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC--
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP----DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS-- 878 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~-- 878 (1088)
|.+.++||+|+||.||+|.++ +++.||||++..... ...+++.+|++++++ ++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~ 76 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKE----FDHPNVIKLIGVSLRSRAK 76 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhc----CCCCCcceEEEEEccCCCC
Confidence 567789999999999999853 368899999976432 234568889999886 67999999999886532
Q ss_pred ----eEEEEEEecCCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEE
Q 001384 879 ----EKILVYEYMEGGSLEDIISDR------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKAL 948 (1088)
Q Consensus 879 ----~~~lv~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~k 948 (1088)
..++++||+++|+|.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~k 153 (273)
T cd05074 77 GRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVC 153 (273)
T ss_pred CcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEE
Confidence 247889999999999887432 2478999999999999999999998 999999999999999999999
Q ss_pred EeecccceeecCCCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhcc
Q 001384 949 VTDFGLARVVSAGDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 949 l~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
++|||.++........ ......++..|++||......++.++||||||+++|||++ |+.||.+.... +........
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~ 231 (273)
T cd05074 154 VADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLIKG 231 (273)
T ss_pred ECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHHcC
Confidence 9999999866433221 1223345678999999988889999999999999999999 88888765431 111111100
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
.. ...+......+.+++.+|++.+|++||++.|+++.|+++
T Consensus 232 ~~----------------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NR----------------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred Cc----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 001122345788999999999999999999999999986
No 279
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=286.73 Aligned_cols=251 Identities=25% Similarity=0.285 Sum_probs=196.9
Q ss_pred HcCCCCcc-ceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec----
Q 001384 803 ATGKFSED-RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD---- 876 (1088)
Q Consensus 803 ~~~~~~~~-~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~---- 876 (1088)
.+++|++. ++||-|-.|+|..+..+ +|+.+|+|++... ...++|++..-.. -.|||||+++++|..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~---s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMA---SGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhh---cCCCceEEeehhhhhhccC
Confidence 45677765 67999999999999976 7899999999765 2335555544332 279999999999864
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC---CCCEEEee
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRTR--LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK---EGKALVTD 951 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~---~~~~kl~D 951 (1088)
.....+|||.|+||.|...+++++. ++++++..|++||+.|+.|||+. +|.||||||+|+|.+. |..+|++|
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 3567899999999999999988764 99999999999999999999999 9999999999999974 45799999
Q ss_pred cccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCC
Q 001384 952 FGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHG 1030 (1088)
Q Consensus 952 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~ 1030 (1088)
||+|+.... .....+.+.|+.|.|||++....|+...|+||+||++|-|++|.+||..... .+..-.+....-+.
T Consensus 208 fGFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq-- 283 (400)
T KOG0604|consen 208 FGFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ-- 283 (400)
T ss_pred cccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC--
Confidence 999987543 2334556789999999999999999999999999999999999999986532 11111111110000
Q ss_pred CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
- .-..+......++..++|+.++..+|++|.+..|+++
T Consensus 284 ---y-------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 284 ---Y-------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ---c-------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 0 0011223455677889999999999999999999874
No 280
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.8e-33 Score=302.12 Aligned_cols=246 Identities=27% Similarity=0.444 Sum_probs=200.0
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|+..+.||+|+||.||+|... +++.+|+|++..... .....+..|++++++ ++|||++++++.+..++..++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~~l 76 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKL----LSHPNIIEYYENFLEDKALMI 76 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhh----CCCCchhheeeeEecCCEEEE
Confidence 5888899999999999999975 688999999876432 234578889999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-CEEEeecccceeec
Q 001384 883 VYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-KALVTDFGLARVVS 959 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-~~kl~Dfg~a~~~~ 959 (1088)
||||+++++|.+++... ..+++..+.+++.|++.|++|||++ +++||||+|+||+++.++ .+|++|||.+....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 77 VMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred EEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 99999999999999764 3589999999999999999999999 999999999999998654 57999999998764
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
... ......++..|+|||......++.++||||+|+++|+|++|+.||...+.. ..........
T Consensus 154 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~------------ 217 (256)
T cd08220 154 SKS--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMSGT------------ 217 (256)
T ss_pred CCc--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHhcC------------
Confidence 322 223356788999999998888999999999999999999999999765331 1111111000
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+......+.+++.+|++.+|++||++.|+++
T Consensus 218 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 218 ----FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00011223457889999999999999999999985
No 281
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.8e-32 Score=301.75 Aligned_cols=254 Identities=29% Similarity=0.461 Sum_probs=203.0
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||.|+||+||+|... ++..+|+|++..... ...+.+.+|+++++. ++|+|++++++.+..+...++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~i 76 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQ----CNHPNVVKYYTSFVVGDELWL 76 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHh----cCCCCEEEEEEEEeeCCEEEE
Confidence 46889999999999999999965 678999999875432 244678899998886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 883 VYEYMEGGSLEDIISDR---TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
||||+++++|.++++.. ..+++..++.++.|++.|++|||+. +++||||+|+||++++++.++++|||++..+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~ 153 (267)
T cd06610 77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLA 153 (267)
T ss_pred EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence 99999999999999764 4589999999999999999999999 99999999999999999999999999987665
Q ss_pred CCCCc---ccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 960 AGDSH---VSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 960 ~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
..... ......++..|+|||++... .++.++||||||+++|+|++|+.||........ ....... .. ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~----~~--~~ 226 (267)
T cd06610 154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTLQN----DP--PS 226 (267)
T ss_pred cCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHhcC----CC--CC
Confidence 43322 22344688899999987766 789999999999999999999999976533111 1111110 00 00
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.... .........+.+++.+|++.||++||++.|+++
T Consensus 227 ~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 227 LETG------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cCCc------cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000 001233467889999999999999999999875
No 282
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4e-33 Score=318.65 Aligned_cols=261 Identities=25% Similarity=0.315 Sum_probs=195.1
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC-
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG- 877 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~- 877 (1088)
...++|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++ ++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~ 87 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKH----MKHENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHh----cCCCchhhhhhhhcccc
Confidence 34578999999999999999999965 678999999876422 233457789999987 6799999999987543
Q ss_pred -----CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeec
Q 001384 878 -----SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDF 952 (1088)
Q Consensus 878 -----~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Df 952 (1088)
...|+++|++ +++|.++++. ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+||
T Consensus 88 ~~~~~~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 88 SIENFNEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cccccCcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3568999998 6799988754 4699999999999999999999999 9999999999999999999999999
Q ss_pred ccceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC
Q 001384 953 GLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 953 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1088)
|+++..... .....+|..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.... ............ .
T Consensus 163 g~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~--~ 235 (343)
T cd07878 163 GLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGT--P 235 (343)
T ss_pred ccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCC--C
Confidence 999865321 234568999999998766 57899999999999999999999999765321 111110000000 0
Q ss_pred Cccccchh-------hcCCCcccc--------HHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAVIPVV-------LLGSGLAEG--------AEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~~~~~-------~~~~~~~~~--------~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+..... ........+ ......+.+++.+|++.||.+||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 236 SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 000000000 011234678999999999999999999984
No 283
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-32 Score=321.55 Aligned_cols=262 Identities=23% Similarity=0.216 Sum_probs=195.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
...|.+.+.||+|+||.||+|.+. .++.||||.... ..+.+|++++++ ++|+|||++++++..++..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~----L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRR----LSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHH----CCCCCCCcEEEEEEECCEEEE
Confidence 447999999999999999999976 578899996432 235679999987 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||++. ++|.+++... ..+++.+++.++.|++.||+|||++ +||||||||+||+++.++.+||+|||+++.....
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 999995 6999888654 4699999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch------hHHHHHHhhhccCCCCCC-c
Q 001384 962 DSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE------CLVEWGRRVMGYGRHGPG-R 1033 (1088)
Q Consensus 962 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~------~~~~~~~~~~~~~~~~~~-~ 1033 (1088)
... ......||..|+|||++.+..++.++|||||||++|||++|..|+..... ...+..+.+......... .
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 221 22345689999999999998999999999999999999998876543211 111111111100000000 0
Q ss_pred c-----ccchhh----cCCCc-------cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1034 A-----VIPVVL----LGSGL-------AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1034 ~-----~~~~~~----~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
. ...... ..... .........+.+++.+|++.||.+||++.|+++.
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 000000 00000 0001122367889999999999999999999863
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.6e-33 Score=303.93 Aligned_cols=248 Identities=28% Similarity=0.432 Sum_probs=203.2
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|+..+.||+|++|.||+|.++ +++.||+|++..... ....++.+|++++++ +.||||+++++++..+...++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~~l 76 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHK----CNSPYIVGFYGAFYNNGDISI 76 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHH----CCCCchhhhheeeecCCEEEE
Confidence 35778899999999999999986 688999999876532 344578899999886 579999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHH-ECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~-~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+||+++++|.+++... ..+++..+.+++.|++.|++|+|+ . +++||||||+||+++.++.++|+|||.+.....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 77 CMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred EEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 99999999999999876 779999999999999999999999 7 999999999999999999999999999865532
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCc---hhHHHHHHhhhccCCCCCCccccc
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGE---ECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
... ....++..|+|||...+..++.++||||+|+++|+|++|+.||.... +...+.........
T Consensus 154 ~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 220 (265)
T cd06605 154 SLA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP---------- 220 (265)
T ss_pred HHh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC----------
Confidence 211 12567889999999988899999999999999999999999997642 12222222222100
Q ss_pred hhhcCCCccccHH-HHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1038 VVLLGSGLAEGAE-EMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+.. ....+.++|.+|+..||++||++.++++
T Consensus 221 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 221 ------PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ------CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 0001111 4467889999999999999999999975
No 285
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.6e-33 Score=307.37 Aligned_cols=259 Identities=25% Similarity=0.418 Sum_probs=201.5
Q ss_pred cCHHHHHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeE
Q 001384 795 FTYSDILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGW 873 (1088)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~ 873 (1088)
.++.++..+.+.|++.+.||+|+||.||+|++. +++.+|+|++.... ....++..|+.++.+.. +|||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~---~h~~i~~~~~~ 81 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYS---HHRNIATYYGA 81 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhc---CCCcEEEEeee
Confidence 345565567789999999999999999999975 68899999886542 23356778888887632 69999999999
Q ss_pred Eec------CCeEEEEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC
Q 001384 874 CLD------GSEKILVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG 945 (1088)
Q Consensus 874 ~~~------~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~ 945 (1088)
+.. ....++||||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 853 45789999999999999998653 3588899999999999999999999 999999999999999999
Q ss_pred CEEEeecccceeecCCCCcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHH
Q 001384 946 KALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWG 1020 (1088)
Q Consensus 946 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 1020 (1088)
.++|+|||++........ ......++..|+|||.+. ...++.++||||+||++|||++|+.||....+......
T Consensus 159 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred CEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 999999999875432211 223456888999999865 34678899999999999999999999976433111110
Q ss_pred HhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1021 RRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.. . .. . ...........+.+++.+|++.||.+||++.|+++
T Consensus 238 --~~---~-~~-----~------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 --IP---R-NP-----P------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --Hh---h-CC-----C------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 0 00 0 00011223457889999999999999999999875
No 286
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.5e-32 Score=305.79 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=201.3
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|+||.||+|.+. +|+.||+|++..... .....+.+|+.++++ ++|||++++++++..+...++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~~~ 76 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQA----CQHPYVVKLLDVFPHGSGFVL 76 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHh----CCCCCCcceeeEEecCCeeEE
Confidence 5888899999999999999975 689999999876542 234678899999986 579999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+ +++|.+++.. ...+++.+++.++.|+++||+|||+. +++|+||||+||+++.++.++++|||.+......
T Consensus 77 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 77 VMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred Eeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 99999 9999999865 35689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC-----Cccc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP-----GRAV 1035 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 1035 (1088)
.........++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+..+ ...+............ ..+.
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCCCChHHHhhccCc
Confidence 3222334568889999998754 3568999999999999999999888866543 2222211110000000 0000
Q ss_pred c--chhhcCCCc-----cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1036 I--PVVLLGSGL-----AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1036 ~--~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ......... .........+.+++.+|++.+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 000000000 001123467889999999999999999999875
No 287
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-33 Score=304.50 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=197.5
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
...|++.+.||+||.+.||++...+.+.+|+|++...... .-..|.+|+..|.++. .|.+||++|+|-..++..|
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk---g~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLK---GHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc---CCceEEEEeeeeccCceEE
Confidence 3568999999999999999999887888898888654322 2356999999999876 7899999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISDRTR-LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~-l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|||||-+. +|..+++.... .....++.+..|++.|+.++|+. ||||.||||.|+|+ -.|.+||+|||.|..+..
T Consensus 437 mvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 437 MVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDFGIANAIQP 511 (677)
T ss_pred EEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeeechhcccCc
Confidence 99999855 99999987664 33348889999999999999999 99999999999999 568999999999988765
Q ss_pred CCCc-ccccccccccccCccccCCC-----------CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCC
Q 001384 961 GDSH-VSTTIAGTVGYVAPEYGQTW-----------QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGR 1028 (1088)
Q Consensus 961 ~~~~-~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1088)
.... .....+||+.||+||.+... ..+.++||||+|||+|+|+.|+.||..-. ..|++... -
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~---n~~aKl~a---I 585 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII---NQIAKLHA---I 585 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH---HHHHHHHh---h
Confidence 4332 34567899999999975533 25678999999999999999999997522 23333211 0
Q ss_pred CCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1029 HGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+..++--+.. +. ..+++++++.|+..||.+||+..|+++
T Consensus 586 ~~P~~~Iefp~~-------~~--~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 586 TDPNHEIEFPDI-------PE--NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cCCCccccccCC-------CC--chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 011111111111 11 123899999999999999999999975
No 288
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.4e-32 Score=302.07 Aligned_cols=247 Identities=27% Similarity=0.411 Sum_probs=200.3
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec--CCeE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD--GSEK 880 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~--~~~~ 880 (1088)
+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+..|++++++ ++|||++++++++.. +...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~ 76 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRE----LKHPNIVRYYDRIIDRSNQTL 76 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHh----cCCCccceeeeeeecCCCCEE
Confidence 4788899999999999999965 678999999875432 233567889999886 679999999998764 4567
Q ss_pred EEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCeEecCCCCCCEEEcCCCCEEEee
Q 001384 881 ILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLH-----HECYPPIVHRDVKASNVLLDKEGKALVTD 951 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH-----~~~~~~ivH~DLkp~NIll~~~~~~kl~D 951 (1088)
+++|||+++++|.++++. ..++++.+++.++.|++.|++||| +. +++|+||+|+||+++.++.+|++|
T Consensus 77 ~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d 153 (265)
T cd08217 77 YIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGD 153 (265)
T ss_pred EEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEec
Confidence 899999999999999875 357899999999999999999999 66 999999999999999999999999
Q ss_pred cccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC
Q 001384 952 FGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 952 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1088)
||++........ ......++..|+|||.+....++.++||||||+++|+|++|+.||..... .+........
T Consensus 154 ~g~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~----- 225 (265)
T cd08217 154 FGLAKILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKIKEG----- 225 (265)
T ss_pred ccccccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHHhcC-----
Confidence 999987654322 12345688999999999888899999999999999999999999987542 1222221100
Q ss_pred CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+......+.+++.+|++.+|++||++.+|++
T Consensus 226 -----------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 226 -----------KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred -----------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 001112334567889999999999999999999986
No 289
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-32 Score=307.69 Aligned_cols=247 Identities=26% Similarity=0.414 Sum_probs=198.8
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
|+....||+|+||.||+|... +++.||+|++........+.+.+|+.++.. +.|||++++++++..++..++|||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~----l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD----YQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHh----CCCCchhhhhhheeeCCeEEEEEe
Confidence 334467999999999999975 689999999876544555678889998886 679999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 886 YMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|+++++|.+++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||++....... ..
T Consensus 99 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~ 173 (297)
T cd06659 99 FLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PK 173 (297)
T ss_pred cCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cc
Confidence 9999999998755 4689999999999999999999999 99999999999999999999999999987543321 22
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 966 STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.....++..|+|||++.+..++.++||||+|+++|||++|+.||........ ......... ...
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~--~~~------------ 237 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--MKRLRDSPP--PKL------------ 237 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHhccCC--CCc------------
Confidence 2345688999999999888999999999999999999999999976543111 111110000 000
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.........+.+++.+|++.+|++||++.|+++
T Consensus 238 ~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 238 KNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 001122346788999999999999999999987
No 290
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.2e-33 Score=309.19 Aligned_cols=248 Identities=27% Similarity=0.435 Sum_probs=198.8
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
|.....||+|+||.||++... +++.||||++........+.+.+|+.+++. ++|||++++++.+...+..++|||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~----l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRD----YHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHh----CCCCcHHHHHHheecCCeEEEEEe
Confidence 334467999999999999975 688999999876544455678899998886 679999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 886 YMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|+++++|.+++.. .++++.++..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||++........ .
T Consensus 100 ~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~ 174 (292)
T cd06658 100 FLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-K 174 (292)
T ss_pred CCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-c
Confidence 9999999998854 4689999999999999999999999 999999999999999999999999999875532221 2
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 966 STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.....++..|+|||...+..++.++||||+|+++|||++|+.||......... .... ...+....
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~--~~~~---------~~~~~~~~---- 239 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM--RRIR---------DNLPPRVK---- 239 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHH---------hcCCCccc----
Confidence 23356889999999998888999999999999999999999999865431111 1110 00000000
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
........+.+++.+|++.||.+||+++|+++.
T Consensus 240 -~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 -DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011233467788889999999999999999864
No 291
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.3e-32 Score=311.16 Aligned_cols=193 Identities=25% Similarity=0.389 Sum_probs=159.4
Q ss_pred cceecccCceEEEEEEeC---CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec--CCeEEEEE
Q 001384 810 DRIIGKGGFGTVYRGVLP---DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD--GSEKILVY 884 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~--~~~~~lv~ 884 (1088)
..+||+|+||.||+|+.+ +++.||+|.+.... ....+.+|+++++. ++||||+++++++.. +...++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRE----LKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHh----CCCCCeeeEEEEEeccCCCeEEEEE
Confidence 368999999999999965 35789999987652 33467889999987 679999999998854 56789999
Q ss_pred EecCCCCHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----cCCCCEEEee
Q 001384 885 EYMEGGSLEDIISDR---------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLL----DKEGKALVTD 951 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~---------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll----~~~~~~kl~D 951 (1088)
||+++ +|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 99975 888877421 2488999999999999999999999 99999999999999 5677999999
Q ss_pred cccceeecCCCCc--ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCC
Q 001384 952 FGLARVVSAGDSH--VSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGG 1012 (1088)
Q Consensus 952 fg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~ 1012 (1088)
||+++........ ......+|..|+|||++.+ ..++.++||||+||++|||+||+.||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9999876433221 1234568899999998765 46899999999999999999999999754
No 292
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.6e-33 Score=316.78 Aligned_cols=192 Identities=22% Similarity=0.314 Sum_probs=164.4
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
...+|++.+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++ ++||||+++++++......+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQN----VNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHh----CCCCCCcChhheEEeCCeeE
Confidence 3467999999999999999999976 5678999985543 23457888876 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+||||+. ++|.+++.. ...+++.+++.++.||+.||+|||++ +||||||||+||+++.++.+||+|||.++....
T Consensus 134 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 9999995 588888865 45699999999999999999999999 999999999999999999999999999875322
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCC
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALE 1010 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~ 1010 (1088)
. .......||..|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 210 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 210 A--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred C--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 1 12234568999999999998899999999999999999998766653
No 293
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.9e-32 Score=304.38 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=193.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||.||+|+++ +|+.||+|++..... ..+.++..|+..+.+ ..+|||++++++++..+...++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~---~~~~~~iv~~~~~~~~~~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMR---SVDCPYTVTFYGALFREGDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHH---HcCCCCeeeeeEEEecCCcEEE
Confidence 36888999999999999999976 689999999876532 233456666665443 2589999999999999999999
Q ss_pred EEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 883 VYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
||||++ |+|.++++. ...+++..++.++.|++.|++|||+++ +++||||||+||+++.++.+||+|||.+...
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999997 588887754 346899999999999999999999863 8999999999999999999999999998765
Q ss_pred cCCCCcccccccccccccCccccCC----CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQT----WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
... .......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||............... ... .
T Consensus 155 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~-----~ 226 (283)
T cd06617 155 VDS--VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE-EPS-----P 226 (283)
T ss_pred ccc--cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh-cCC-----C
Confidence 321 12233467889999998754 45688999999999999999999999754322111111110 000 0
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+ ....+.++.+++.+|+..+|++||++.++++
T Consensus 227 ~~~----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 227 QLP----------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCC----------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 1123457888999999999999999999986
No 294
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.3e-32 Score=304.21 Aligned_cols=252 Identities=29% Similarity=0.455 Sum_probs=199.9
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC---
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS--- 878 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~--- 878 (1088)
.+++|++.+.||+|++|.||+|..+ +++.+++|++.... ....++.+|++++++.. .|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~---~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYS---NHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhc---CCCChheEEEEEEecCCCC
Confidence 5688999999999999999999975 57899999987653 23467889999988732 6999999999997644
Q ss_pred ---eEEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEee
Q 001384 879 ---EKILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTD 951 (1088)
Q Consensus 879 ---~~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~D 951 (1088)
..++||||+++++|.++++. ...+++..++.++.|++.||+|||+. +++||||+|+||++++++.++++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 48999999999999999865 34789999999999999999999999 999999999999999999999999
Q ss_pred cccceeecCCCCcccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhcc
Q 001384 952 FGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-----WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 952 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
||.+....... .......++..|+|||++.. ..++.++||||+|+++|+|++|+.||....... .. ....
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~-~~~~-- 231 (275)
T cd06608 157 FGVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-AL-FKIP-- 231 (275)
T ss_pred Cccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HH-HHhh--
Confidence 99987654322 22234568889999997653 356789999999999999999999997543211 11 1111
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. .. .+ ....+.....++.+++.+|+..||++||++.|+++
T Consensus 232 -~-~~----~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 -R-NP----PP------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -c-cC----CC------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 00 00 00112234567889999999999999999999975
No 295
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=341.58 Aligned_cols=251 Identities=29% Similarity=0.421 Sum_probs=207.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
+-+|+....||.|.||.||-|... +|.-.|||-++-.... .-..+.+|+.++.. +.|||+|++||+-..++..
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~----lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEG----LNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHh----ccCccccccCceeecHHHH
Confidence 456778889999999999999954 6888999988754322 23568899999986 7899999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+|.||||++|+|.+.++..+..++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|..+..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 99999999999999998888888888899999999999999999 999999999999999999999999999998865
Q ss_pred CCCcc---cccccccccccCccccCCC---CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 961 GDSHV---STTIAGTVGYVAPEYGQTW---QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 961 ~~~~~---~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
..... .....||+.|||||++.+. ....++||||+|||+.||+||++||...+. +|+-.+
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---e~aIMy----------- 1452 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---EWAIMY----------- 1452 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---hhHHHh-----------
Confidence 43121 2356899999999987653 456789999999999999999999986543 443332
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..-++..+..|.....+-.+++.+|+..||++|.++.++++
T Consensus 1453 ---~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1453 ---HVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ---HHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 22233333445566677788999999999999988877654
No 296
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.5e-33 Score=307.32 Aligned_cols=264 Identities=23% Similarity=0.283 Sum_probs=195.8
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|+..+.||+|+||.||+|+++ +|+.||+|++..... .....+.+|++++++ ++|||++++++++.+....++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~----l~h~~i~~~~~~~~~~~~~~l 76 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE----LKHKNIVRLYDVLHSDKKLTL 76 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHh----cCCCCeeeHHHHhccCCceEE
Confidence 5788899999999999999976 689999999875422 223467789999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|+||+++ +|.+++.. ...+++..++.++.||++||+|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 77 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 77 VFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred EEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 9999975 88888764 55799999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHh--hhccCCC--------C
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRR--VMGYGRH--------G 1030 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~--~~~~~~~--------~ 1030 (1088)
.. ......++..|+|||.+.+. .++.++||||+||++|||++|+.|+....+........ ....... .
T Consensus 153 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 153 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred CC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 21 12234568899999987654 57899999999999999999999975443311111110 0000000 0
Q ss_pred CCccccchhhcC-CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRAVIPVVLLG-SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......+..... ...........++.+++.+|++.||.+|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000000000 000001123457788999999999999999999875
No 297
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.8e-32 Score=300.58 Aligned_cols=249 Identities=24% Similarity=0.309 Sum_probs=185.6
Q ss_pred eecccCceEEEEEEeCC---CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEec
Q 001384 812 IIGKGGFGTVYRGVLPD---GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYM 887 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~ 887 (1088)
.||+|+||+||+|...+ ...+|+|.+...... ....+.+|++.++. ++||||+++++++......++||||+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~----l~h~nii~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRE----LNHPNVLQCLGQCIESIPYLLVLEFC 77 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHh----CCCCCcceEEEEECCCCceEEEEEeC
Confidence 58999999999997543 356888887654322 23567889988876 67999999999999999999999999
Q ss_pred CCCCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 888 EGGSLEDIISDRT-----RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 888 ~~gsL~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
++|+|.+++.... ..++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccch
Confidence 9999999997643 246788899999999999999999 99999999999999999999999999986543222
Q ss_pred Cc-ccccccccccccCccccC-------CCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCc
Q 001384 963 SH-VSTTIAGTVGYVAPEYGQ-------TWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 963 ~~-~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1088)
.. ......++..|+|||+.. ...++.++||||+||++|||++ |..||....+... ....... .. .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~-~~----~ 228 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-LKQVVRE-QD----I 228 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-HHHHhhc-cC----c
Confidence 11 122334567899999754 3466889999999999999999 7788876543211 1111110 00 0
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
....+. ........+.+++..|+ .||++||+++||++.|.
T Consensus 229 ~~~~~~-------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQ-------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCc-------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 000000 11223355667777888 59999999999998873
No 298
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.6e-32 Score=305.65 Aligned_cols=264 Identities=25% Similarity=0.319 Sum_probs=199.8
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc-----chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE-----GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
+|++.+.||+|+||.||+|.+. +++.||||++...... ....+..|++++++ ++|+||+++++++.+...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~ 76 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQE----LKHPNIIGLLDVFGHKSN 76 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhh----cCCCCChhhhheeecCCE
Confidence 4778899999999999999975 6899999999865432 23456778888886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.++||||+ +|+|.++++... .+++.+++.++.||++||+|||++ +++||||+|+||+++.++.++|+|||+++..
T Consensus 77 ~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 77 INLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSF 152 (298)
T ss_pred EEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence 99999999 889999998776 799999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC-----C
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP-----G 1032 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~ 1032 (1088)
..... ......++..|+|||.+.+ ..++.++|||||||++|||++|..||.+..+ ................ .
T Consensus 153 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 153 GSPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred cCCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHHcCCCchhhhhhc
Confidence 54322 2223346788999998754 5678999999999999999999877765433 1111111110000000 0
Q ss_pred ccccchhhcCCCcc-----ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1033 RAVIPVVLLGSGLA-----EGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1033 ~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.............. ........+.+++.+|++.||++||++.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000000000 012234678899999999999999999999873
No 299
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.4e-32 Score=304.22 Aligned_cols=244 Identities=25% Similarity=0.294 Sum_probs=189.6
Q ss_pred eecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEec
Q 001384 812 IIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYM 887 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~ 887 (1088)
.||+|+||.||+|... +++.+|+|.+.+.... ....+.+|..++.... ...|||++.+++++..++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS-TGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHh-hCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 4899999999999975 6889999998764322 1223344443333221 247999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcccc
Q 001384 888 EGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVST 967 (1088)
Q Consensus 888 ~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 967 (1088)
++|+|.+++.....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++....... ..
T Consensus 80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~ 153 (279)
T cd05633 80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH 153 (279)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---cc
Confidence 9999999998888899999999999999999999999 99999999999999999999999999987653221 22
Q ss_pred cccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 968 TIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 968 ~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
...|+..|+|||... +..++.++||||+||++|||++|..||............... .. ....
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~---------------~~~~ 217 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LT---------------VNVE 217 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh-hc---------------CCcC
Confidence 346899999999876 456899999999999999999999999754321111111110 00 0001
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
.+.....++.+++.+|++.||++|| +++|+++
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 1223446788899999999999999 5888876
No 300
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.7e-32 Score=297.31 Aligned_cols=251 Identities=20% Similarity=0.279 Sum_probs=195.5
Q ss_pred HHHHHHHcCCCCcccee--cccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeE
Q 001384 797 YSDILKATGKFSEDRII--GKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGW 873 (1088)
Q Consensus 797 ~~~~~~~~~~~~~~~~L--G~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~ 873 (1088)
..+.....++|++.+.+ |+|+||.||++..+ +++.+|+|.+........ ..+...+. .+|||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---e~~~~~~~-----~~h~~iv~~~~~ 77 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI---EPMVHQLM-----KDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh---hHHHHHHh-----hcCCCEEEEEEE
Confidence 34445555677777776 99999999999975 678899999875422211 11111111 269999999999
Q ss_pred EecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-CEEEeec
Q 001384 874 CLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-KALVTDF 952 (1088)
Q Consensus 874 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-~~kl~Df 952 (1088)
+..++..++||||+++++|.++++....+++.++..++.|++.|++|||+. +++||||||+||+++.++ .++++||
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 999999999999999999999998887899999999999999999999999 999999999999999998 9999999
Q ss_pred ccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC
Q 001384 953 GLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 953 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1088)
|.++..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||....+....+.........
T Consensus 155 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---- 225 (267)
T PHA03390 155 GLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK---- 225 (267)
T ss_pred ccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc----
Confidence 998765422 22457889999999998899999999999999999999999998553322111111110000
Q ss_pred ccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC-HHHHHH
Q 001384 1033 RAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN-VKEVLA 1078 (1088)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~eil~ 1078 (1088)
...........+.+++.+|++.+|.+||+ ++|+++
T Consensus 226 -----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 -----------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00112234467889999999999999996 588764
No 301
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.6e-32 Score=304.47 Aligned_cols=267 Identities=22% Similarity=0.287 Sum_probs=196.9
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++++|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|+++++. ++|+||+++++++.++...
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~----l~h~ni~~~~~~~~~~~~~ 78 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKG----LKHANIVLLHDIIHTKETL 78 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHh----cCCCCEeEEEEEEecCCeE
Confidence 3467999999999999999999965 6889999998754322 23467789998886 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
++||||++ +++.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 79 TFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 99999996 577777654 35688999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC--------
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG-------- 1030 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 1030 (1088)
.... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+..+................
T Consensus 155 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 155 IPSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 2221 1233456889999998765 35788999999999999999999999865442221111100000000
Q ss_pred CCccccchhhcCCCccc------cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRAVIPVVLLGSGLAE------GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......+.......... .......+.+++.+|++.||++|||++|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000000 0011356778899999999999999999874
No 302
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.3e-32 Score=302.71 Aligned_cols=250 Identities=28% Similarity=0.437 Sum_probs=199.4
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.|+..+.||+|+||.||+|.+. +++.||+|.+..... ....++.+|+++++++.. ..|||++++++++..+...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~-~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ-SQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc-CCCCCeeeEeeeeeeCCEEEEE
Confidence 4777899999999999999974 789999999875432 334568889888886431 3599999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++++|.++++.. .+++..++.++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+..+.....
T Consensus 81 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 81 MEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 9999999999998664 789999999999999999999999 999999999999999999999999999987654332
Q ss_pred cccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 964 HVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
......|+..|+|||...+ ..++.++||||||+++|+|++|+.||.+... ..+..... . . ......
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~~~~---~-~-----~~~~~~- 223 (277)
T cd06917 157 -KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA--FRAMMLIP---K-S-----KPPRLE- 223 (277)
T ss_pred -ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh--hhhhhccc---c-C-----CCCCCC-
Confidence 2234468889999998764 4568999999999999999999999976432 11111100 0 0 000000
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......++.+++.+|++.||++||++.|+++
T Consensus 224 -----~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 224 -----DNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred -----cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0113457888999999999999999999975
No 303
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-34 Score=289.47 Aligned_cols=268 Identities=24% Similarity=0.344 Sum_probs=205.9
Q ss_pred CHHHHHHHcCCCCccceecccCceEEEEEE-eCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEE
Q 001384 796 TYSDILKATGKFSEDRIIGKGGFGTVYRGV-LPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWC 874 (1088)
Q Consensus 796 ~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~ 874 (1088)
++.|+-+.++ ++||+|+|+.|--++ ..+|.++|||++.+.....+.++.+|++++.... .|+||+++++||
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq---gh~nilqLiefF 145 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ---GHKNILQLIEFF 145 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc---CCccHHHHHHHh
Confidence 3566655553 789999999999988 5689999999999886666778999999998865 799999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC---CEEEee
Q 001384 875 LDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG---KALVTD 951 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~---~~kl~D 951 (1088)
+++...|+|||.|.||+|...|+++.-+++.++.++.++|+.||+|||.+ ||.|||+||+|||-.+.. -+||+|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeec
Confidence 99999999999999999999999999999999999999999999999999 999999999999997654 589999
Q ss_pred cccceeecCCC------CcccccccccccccCcccc-----CCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHH
Q 001384 952 FGLARVVSAGD------SHVSTTIAGTVGYVAPEYG-----QTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWG 1020 (1088)
Q Consensus 952 fg~a~~~~~~~------~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 1020 (1088)
|+++.-..... .....+.+|+..|||||+. ....|+.+.|.||+|||+|-|++|..||.+.-....-|.
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 98875432111 1112346788999999963 345789999999999999999999999987643333332
Q ss_pred HhhhccCCCCCCccccchhhcCCCccccH----HHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1021 RRVMGYGRHGPGRAVIPVVLLGSGLAEGA----EEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+...-.. -....++.+..+. ...|. ....+..+++...+..|+..|.++..++.
T Consensus 303 rGe~Cr~---CQ~~LFesIQEGk-YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 303 RGEVCRV---CQNKLFESIQEGK-YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCCccHH---HHHHHHHHHhccC-CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 2100000 0001111111111 11222 23345667777888999999999988875
No 304
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.2e-32 Score=304.96 Aligned_cols=250 Identities=28% Similarity=0.430 Sum_probs=202.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
++|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++. ++|||++++++++..+...++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~----l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE----NKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhh----cCCCCeeehhheeeeCCcEEEE
Confidence 57889999999999999999865 678999999876544455678889998876 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
+||+++++|.+++.+. .+++.++..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 95 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred EecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999999998754 588999999999999999999999 999999999999999999999999998876543322
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
......+++.|+|||......++.++||||||+++|++++|+.||......... .... .... .
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~--~~~~---~~~~-----------~ 233 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL--YLIA---TNGT-----------P 233 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe--eehh---cCCC-----------C
Confidence 223346788999999988888999999999999999999999999764331110 0000 0000 0
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
....+......+.+++.+|++.+|++||++.+++..
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001122234568889999999999999999999864
No 305
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=8.2e-33 Score=302.76 Aligned_cols=247 Identities=28% Similarity=0.372 Sum_probs=203.5
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+|++.+.||.|+||.||+|.+. +++.||+|++.+... ...+.+.+|++++++ ++||||+++++++.++...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~ 76 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQE----LNHPFLVNLWYSFQDEENMY 76 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHh----CCCCChHHHHHhhcCCCeEE
Confidence 4788999999999999999976 689999999976532 234678889999886 68999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+|+||+++++|.+++....++++.++..++.|+++||+|||+. +++|+||+|+||++++++.++++|||.+......
T Consensus 77 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 77 LVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred EEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 9999999999999998877899999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
. ......++..|+|||...+..++.++||||+|+++|+|++|+.||.........+.......
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------- 216 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--------------- 216 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---------------
Confidence 2 22345678899999999888899999999999999999999999987543222222211100
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCH--HHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNV--KEVL 1077 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~eil 1077 (1088)
.....+...+..+.+++.+|++.||.+||++ +|++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0011122334678899999999999999999 5554
No 306
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.5e-32 Score=302.65 Aligned_cols=251 Identities=29% Similarity=0.468 Sum_probs=205.0
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.++.|+..+.||+|++|.||+|.++ +++.||+|++..... ....+..|+++++. ++|+|++++++++......+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKD----CKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHH----CCCCCeeEEEEEEEECCEEE
Confidence 4567888899999999999999986 688999999976533 45678889998886 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+|+||+++++|.+++.... .+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 9999999999999998876 899999999999999999999998 999999999999999999999999998865543
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
... ......++..|+|||++.+..++.++||||||+++|+|++|+.||......... ........ ..
T Consensus 169 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~--~~~~~~~~----~~------ 235 (286)
T cd06614 169 EKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL--FLITTKGI----PP------ 235 (286)
T ss_pred chh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhcCC----CC------
Confidence 221 223345788999999988888999999999999999999999999765432111 11110000 00
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+..+.+++.+|++.+|.+||++.++++
T Consensus 236 ----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 ----LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ----CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0011223467889999999999999999999975
No 307
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.5e-32 Score=307.31 Aligned_cols=250 Identities=25% Similarity=0.349 Sum_probs=200.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|+..+.||+|++|.||+|... +++.||+|.+...... ..+.+..|++++.. +.||||+++++++.++...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~ 76 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILAT----LDHPFLPTLYASFQTETYL 76 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHh----CCCCCchhheeeeecCCEE
Confidence 36888999999999999999976 5899999999865433 33567889999886 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 881 ILVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
++||||+.+++|.++++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 77 CLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQS 153 (316)
T ss_pred EEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence 9999999999999999754 4689999999999999999999999 9999999999999999999999999998754
Q ss_pred cCCCCc----------------------------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCC
Q 001384 959 SAGDSH----------------------------VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALE 1010 (1088)
Q Consensus 959 ~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~ 1010 (1088)
...... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 322110 1112467889999999988889999999999999999999999997
Q ss_pred CCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC----HHHHHH
Q 001384 1011 GGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN----VKEVLA 1078 (1088)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 1078 (1088)
+.... ..+..... . .. ..+........+.+++.+|++.||++||+ ++|+++
T Consensus 234 ~~~~~-~~~~~~~~---~--~~-----------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 234 GSNRD-ETFSNILK---K--EV-----------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCchH-HHHHHHhc---C--Cc-----------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 65432 11111110 0 00 00001114567889999999999999999 666655
No 308
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.2e-32 Score=295.03 Aligned_cols=248 Identities=31% Similarity=0.503 Sum_probs=204.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
.|+..+.||+|++|.||+|.+. +++.+++|++..........+.+|+++++. ++|++++++++++..+...++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKK----CKHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHh----CCCCCEeEEEEEEecCCeEEEEE
Confidence 3777899999999999999986 688999999987654456788999999986 67999999999999999999999
Q ss_pred EecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 885 EYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||+++++|.+++... ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 999999999999776 5799999999999999999999998 999999999999999999999999999887654332
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
.....++..|+|||......++.++||||||+++|+|++|+.||............... . . .. .
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~--~-~~-~------- 217 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN---G--P-PG-L------- 217 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc---C--C-CC-c-------
Confidence 34456888999999988888999999999999999999999999865321111111000 0 0 00 0
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.........+.+++.+|++.||++||++.|+++
T Consensus 218 --~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 218 --RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 001112467889999999999999999999875
No 309
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.6e-32 Score=302.10 Aligned_cols=247 Identities=28% Similarity=0.436 Sum_probs=200.0
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
|...+.||+|++|.||+|... +++.+|+|++........+.+.+|+.+++. +.|||++++++++...+..++|+|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~----~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRD----YQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHH----cCCCChheEEEEEEcCCeEEEEEe
Confidence 444579999999999999964 688999999875544445668889998886 679999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 886 YMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|+++++|.+++.. .++++.++..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+...... ...
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~-~~~ 171 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE-VPR 171 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccC-Ccc
Confidence 9999999999977 5789999999999999999999999 9999999999999999999999999987654322 112
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 966 STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.....++..|+|||...+..++.++||||+|+++|||++|+.||..... .+.......... ...
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--~~~~~~~~~~~~---------~~~----- 235 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--LQAMKRIRDNLP---------PKL----- 235 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHhcCC---------CCC-----
Confidence 2335688999999999888899999999999999999999999976443 122222211000 000
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+......+.+++.+|++.+|++||++.|+++
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 236 KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 001123457889999999999999999999985
No 310
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.8e-33 Score=308.12 Aligned_cols=249 Identities=25% Similarity=0.380 Sum_probs=211.1
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccch--HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE--REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
..+.|.+.+.||+|.|++|..|++. ++..||+|.+.+...... +.+.+|+++|.. +.|||||+++.+......
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~----l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKS----LNHPNIVKLFSVIETEAT 129 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHh----cCCcceeeeeeeeeecce
Confidence 3567899999999999999999975 799999999988754433 458899999986 789999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.|+||||+.+|.+++++..++++.+..++.++.|+..|++|+|++ .|||||||++||+++.+..+||+|||++..+.
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999999999999999999999999999999999999 99999999999999999999999999999886
Q ss_pred CCCCcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQA-TTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.......++|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||++..- .+.-+.
T Consensus 207 --~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l------------------k~Lr~r 266 (596)
T KOG0586|consen 207 --YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL------------------KELRPR 266 (596)
T ss_pred --ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc------------------ccccch
Confidence 3345677899999999999888766 5789999999999999999999997532 111122
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.+.+.. -.+.....++-+++++++-.+|.+|++.++|.+-
T Consensus 267 vl~gk~-rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 267 VLRGKY-RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred heeeee-cccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 222211 1122233467788889999999999999998753
No 311
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.3e-32 Score=300.35 Aligned_cols=246 Identities=28% Similarity=0.424 Sum_probs=199.9
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
-|+..+.||+|+||.||+|.+. +++.||+|.+..... .....+.+|+.++.+ ++||||+++++++.++...++|
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ----CDSPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHh----cCCCCEeEEEEEEEeCCeEEEE
Confidence 3677889999999999999865 688999998865432 233568889998886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence 999999999999865 4689999999999999999999998 99999999999999999999999999987664322
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCC
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGS 1043 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1088)
.......++..|+|||...+..++.++||||+||++|+|++|..||....... +...... . .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~--~-~------------- 217 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLIPK--N-N------------- 217 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHHhc--C-C-------------
Confidence 12233467889999999988889999999999999999999999997644311 1111110 0 0
Q ss_pred CccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1044 GLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1044 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
........+..+.+++.+|++.+|.+||++.++++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00011223456888999999999999999999998
No 312
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.2e-32 Score=297.49 Aligned_cols=243 Identities=24% Similarity=0.312 Sum_probs=190.9
Q ss_pred ceecccCceEEEEEEeC-CCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
+.||+|+||.||+|... +++.||+|++.+..... ...+..|..++.. ...|+|++++++++..++..++||||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~---~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI---QGESPYVAKLYYSFQSKDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh---cCCCCCeeeeeeeEEcCCeEEEEEec
Confidence 56999999999999975 68899999987643222 2234445444433 24799999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++++|.++++....+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++|||++..... .
T Consensus 79 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~ 150 (260)
T cd05611 79 LNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----N 150 (260)
T ss_pred cCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----c
Confidence 99999999998888899999999999999999999998 999999999999999999999999999876432 2
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcc
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLA 1046 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1088)
....++..|+|||...+..++.++||||+|+++|+|++|..||....... .+. ........ .+. .
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~-~~~~~~~~------~~~-------~ 215 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFD-NILSRRIN------WPE-------E 215 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHH-HHHhcccC------CCC-------c
Confidence 23457889999999888888999999999999999999999997654321 111 11100000 000 0
Q ss_pred ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1047 EGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1047 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
........+.+++.+|++.+|++||++.++.+.
T Consensus 216 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 216 VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred ccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 111234678899999999999999987655443
No 313
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=330.43 Aligned_cols=253 Identities=26% Similarity=0.300 Sum_probs=210.2
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
...++|++.++||+|+||.|..++.+ +++.+|+|++.+.. .....-|..|-++|.. -..+=|+++...|.++
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~----~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVF----GNSEWIVQLHYAFQDE 147 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHc----CCcHHHHHHHHHhcCc
Confidence 34578999999999999999999986 68889999998843 2334568888888875 2467799999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 878 SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
...|+|||||+||+|-.++.+.+++++..++.|+..|+.||+-+|+. |+|||||||+|||+|..|++|++|||.+..
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHh
Confidence 99999999999999999999988999999999999999999999999 999999999999999999999999999988
Q ss_pred ecCCCCcccccccccccccCccccC----C-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC
Q 001384 958 VSAGDSHVSTTIAGTVGYVAPEYGQ----T-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1088)
+.......+...+|||.|++||+++ + +.|+..+|+||+||++|||+.|..||.. +.+++.+..++.+.....
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa--dslveTY~KIm~hk~~l~- 301 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA--DSLVETYGKIMNHKESLS- 301 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH--HHHHHHHHHHhchhhhcC-
Confidence 8766666677889999999999754 3 6899999999999999999999999986 456777777764422111
Q ss_pred ccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCC---HHHHH
Q 001384 1033 RAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPN---VKEVL 1077 (1088)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil 1077 (1088)
+| .....+.+..+||.+.+. +|+.|.. +.|+.
T Consensus 302 ---FP---------~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 302 ---FP---------DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred ---CC---------cccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 11 012244566777777776 6888887 76664
No 314
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.2e-33 Score=331.02 Aligned_cols=251 Identities=27% Similarity=0.374 Sum_probs=188.8
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC----
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG---- 877 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~---- 877 (1088)
..+|+..++||+||||.||+++.+ ||+.+|||++.-.. ...-..+.+|++.+++ ++|||||++|..|.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LAr----LnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLAR----LNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhh----cCCcceeeeehhhhccCCcc
Confidence 356788899999999999999987 89999999998664 1222468889999997 7899999998654310
Q ss_pred --------------------------------------------------------------------------------
Q 001384 878 -------------------------------------------------------------------------------- 877 (1088)
Q Consensus 878 -------------------------------------------------------------------------------- 877 (1088)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CeEEEEEEecCCCCHHHHHhhcCCC-CHHHHHHHHHHHHHHHHHH
Q 001384 878 -----------------------------------SEKILVYEYMEGGSLEDIISDRTRL-TWRRRLDIAIDVARALVFL 921 (1088)
Q Consensus 878 -----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~l-~~~~~~~i~~qi~~~L~yL 921 (1088)
...||-||||+..+++++++++... ....+++++++|++||+|+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 0127889999998888888776544 5788899999999999999
Q ss_pred HhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec----C-------------CCCcccccccccccccCccccCCC
Q 001384 922 HHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS----A-------------GDSHVSTTIAGTVGYVAPEYGQTW 984 (1088)
Q Consensus 922 H~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~----~-------------~~~~~~~~~~gt~~y~aPE~~~~~ 984 (1088)
|++ |||||||||.||++|++..|||+|||+|+... . .+....+..+||.-|+|||++.+.
T Consensus 714 H~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 999 99999999999999999999999999998621 0 011123456899999999987765
Q ss_pred C---CCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhh
Q 001384 985 Q---ATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVR 1061 (1088)
Q Consensus 985 ~---~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 1061 (1088)
. |+.|+|+||+|||++||+. ||... ++-+..........-... .. ...+....=.++|.+
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts----MERa~iL~~LR~g~iP~~---~~-------f~~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTS----MERASILTNLRKGSIPEP---AD-------FFDPEHPEEASLIRW 853 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCch----HHHHHHHHhcccCCCCCC---cc-------cccccchHHHHHHHH
Confidence 4 9999999999999999983 56543 222222221111110000 00 012223344567889
Q ss_pred hcccCCCCCCCHHHHHH
Q 001384 1062 CTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1062 cl~~dP~~RPs~~eil~ 1078 (1088)
|+++||.+||||.|+++
T Consensus 854 Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLN 870 (1351)
T ss_pred HhcCCCccCCCHHHHhh
Confidence 99999999999999975
No 315
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.3e-32 Score=302.03 Aligned_cols=263 Identities=24% Similarity=0.351 Sum_probs=196.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|++|.||+|..+ +++.||+|.+...... ....+.+|++++++ ++||||+++++++.+++..++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~~l 80 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKD----LKHANIVTLHDIIHTKKTLTL 80 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhh----CCCcceeeEEEEEecCCeEEE
Confidence 57889999999999999999976 6889999998754322 23456789999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++ +|.+++.+. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 9999985 999988764 4689999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHh--hhccCCCCCC------
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRR--VMGYGRHGPG------ 1032 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~--~~~~~~~~~~------ 1032 (1088)
.. ......++..|+|||+..+ ..++.++||||+|+++|+|++|+.||.+.......+... ..........
T Consensus 157 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 157 SK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred Cc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 11 1122346788999998764 468899999999999999999999997654221111111 0000000000
Q ss_pred --------ccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1033 --------RAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1033 --------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+....... . .......+.+++.+|++.+|++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHA-P-RLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccccCChhHHHhC-c-CCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000000 0 0011256788999999999999999999875
No 316
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-31 Score=298.92 Aligned_cols=254 Identities=28% Similarity=0.395 Sum_probs=199.4
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--CeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--SEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~~~ 880 (1088)
++|+..+.||.|++|.||+|.+. +++.+|+|.+..... ....++.+|++++++ ++||||+++++++.+. ...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~~~ 76 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKS----CKSPYIVKYYGAFLDESSSSI 76 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHh----CCCCCeeeeeeEEEccCCCeE
Confidence 36788899999999999999985 678999999875432 344678899999986 6899999999988653 468
Q ss_pred EEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 881 ILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 153 (287)
T cd06621 77 GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSG 153 (287)
T ss_pred EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccc
Confidence 999999999999988753 34589999999999999999999999 99999999999999999999999999987
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch---hHHHHHHhhhccCCCCCCc
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE---CLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~ 1033 (1088)
...... .....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ...+.......... .
T Consensus 154 ~~~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~ 226 (287)
T cd06621 154 ELVNSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN----P 226 (287)
T ss_pred cccccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc----h
Confidence 543221 1234578899999999888999999999999999999999999986521 11222222111000 0
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+ ............+.+++.+|++.+|++||++.|+++
T Consensus 227 -~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 227 -ELK-----DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -hhc-----cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000 000001123467889999999999999999999987
No 317
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.1e-32 Score=296.06 Aligned_cols=242 Identities=28% Similarity=0.349 Sum_probs=198.7
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|++|.||+|++. +++.||+|++.+... ...+.+.+|+++++. ++||||+++++++.++...++||||++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEE----CNHPFIVKLYRTFKDKKYIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHh----CCCCCEeeeeeeEEcCCccEEEEecCC
Confidence 699999999999976 588999999976432 234578899998886 679999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccc
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
+++|.+++.+...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+....... ....
T Consensus 77 ~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 77 GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 999999998888899999999999999999999998 99999999999999999999999999998765332 2233
Q ss_pred ccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcccc
Q 001384 969 IAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEG 1048 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1088)
..++..|+|||.+....++.++|+||+|+++|+|++|..||....+...+.......... ....+
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 216 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG---------------KLEFP 216 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC---------------CCCCC
Confidence 467889999999888889999999999999999999999998765322222222221000 00112
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCC-----HHHHHH
Q 001384 1049 AEEMSELLRIGVRCTAEAPNARPN-----VKEVLA 1078 (1088)
Q Consensus 1049 ~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~ 1078 (1088)
......+.+++.+|++.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 222567899999999999999999 777765
No 318
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-33 Score=275.52 Aligned_cols=248 Identities=25% Similarity=0.430 Sum_probs=194.6
Q ss_pred CccceecccCceEEEEEEeC-CCcEEEEEEccccCccc-hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 808 SEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG-EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 808 ~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
+....||+|+.|.|++++.+ +|...|||.+.+..... .+++...++++.. ...+|+||+-+|||..+..+++.||
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~---s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLK---SHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhh---ccCCCeeeeeeeEEeeCchHHHHHH
Confidence 44567999999999999976 58899999998764332 3456666776664 2358999999999999999999999
Q ss_pred ecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 886 YMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 886 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
.|.. .++.++++ ..++++.-+-++...++.||.||.+++ +|+|||+||+|||+|+.|.+|++|||.+-++- ++.
T Consensus 172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlv--dSk 246 (391)
T KOG0983|consen 172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLV--DSK 246 (391)
T ss_pred HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceee--ccc
Confidence 9954 66666654 446899999999999999999999985 99999999999999999999999999998765 344
Q ss_pred ccccccccccccCccccCC---CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 965 VSTTIAGTVGYVAPEYGQT---WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
..+..+|.+.|||||.+.. ..|+.++||||||+.++|+.||+.||.+-..++.... .+.. ..++.+.
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt-kvln---------~ePP~L~ 316 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT-KVLN---------EEPPLLP 316 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH-HHHh---------cCCCCCC
Confidence 4556679999999998764 3789999999999999999999999998544222111 1110 0011111
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
........+.+++..|+++|+.+||...++++
T Consensus 317 -----~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 317 -----GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred -----cccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 12224567889999999999999999988765
No 319
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.2e-32 Score=298.10 Aligned_cols=249 Identities=22% Similarity=0.304 Sum_probs=184.5
Q ss_pred eecccCceEEEEEEeCCC---cEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEec
Q 001384 812 IIGKGGFGTVYRGVLPDG---REVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYM 887 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~ 887 (1088)
.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.+++. ++||||+++++++.+....++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~----l~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRI----LQHPNILQCLGQCVEAIPYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhc----cCCcchhheEEEecCCCccEEEEecC
Confidence 599999999999985433 356677766543 2344678889888876 67999999999999999999999999
Q ss_pred CCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 888 EGGSLEDIISDR----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 888 ~~gsL~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
++|+|.+++++. ...++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchh
Confidence 999999999753 2366778889999999999999998 999999999999999999999999999864322111
Q ss_pred -cccccccccccccCccccCC-------CCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 964 -HVSTTIAGTVGYVAPEYGQT-------WQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 964 -~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
.......++..|+|||+... ..++.++||||||+++|||++ |..||....+ .+.......... ..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~~~----~~ 228 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--REVLNHVIKDQQ----VK 228 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHhhcc----cc
Confidence 11234567889999998643 245789999999999999997 4667765433 111111110000 01
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
..++.. ......++.+++..|+ .+|++||+++||++.|.
T Consensus 229 ~~~~~~-------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQL-------ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCcc-------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111111 1113356777888999 67999999999998874
No 320
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=338.70 Aligned_cols=325 Identities=28% Similarity=0.318 Sum_probs=180.0
Q ss_pred eccccccccccccccccCCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccC-cccCCCCCCCceeeccccccc
Q 001384 84 LNLTDWNISGDIFNNFSALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSG-DLNLSGLRSLEILDLSVNRIH 162 (1088)
Q Consensus 84 L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-~~~l~~l~~L~~L~Ls~N~l~ 162 (1088)
+|.++..++- ||..+-.-..++.|+++.|-+-...-+.+.+.-+|+.|+|++|+++. +..+..+++|+.|+++.|.|.
T Consensus 3 vd~s~~~l~~-ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~ 81 (1081)
T KOG0618|consen 3 VDASDEQLEL-IPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIR 81 (1081)
T ss_pred cccccccCcc-cchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhHh
Confidence 3444444433 33334444447777777776653222344455557777777777765 345667777777777777765
Q ss_pred ccccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCccccccccccCcccceecccCcccccccccccccC
Q 001384 163 GEISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSVFKE 242 (1088)
Q Consensus 163 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 242 (1088)
. .|.+. ..+.+|++++|..|.+. ..|..+..+.+|++|++++|++.. .+..+..
T Consensus 82 ~-vp~s~-~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~~-----------------------~Pl~i~~ 135 (1081)
T KOG0618|consen 82 S-VPSSC-SNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFGP-----------------------IPLVIEV 135 (1081)
T ss_pred h-Cchhh-hhhhcchhheeccchhh-cCchhHHhhhcccccccchhccCC-----------------------CchhHHh
Confidence 2 23222 12245566666555555 334556666777777777766541 1122333
Q ss_pred CCccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEE
Q 001384 243 NCSLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLD 322 (1088)
Q Consensus 243 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 322 (1088)
++.++.+..++|..+..++. .. ++.+++..|.+.+.++.++..+.. .|+|.+|.+.. ..+.++.+|+.|.
T Consensus 136 lt~~~~~~~s~N~~~~~lg~----~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dls~~~~l~~l~ 205 (1081)
T KOG0618|consen 136 LTAEEELAASNNEKIQRLGQ----TS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDLSNLANLEVLH 205 (1081)
T ss_pred hhHHHHHhhhcchhhhhhcc----cc-chhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhhhhccchhhhh
Confidence 44566666676632222222 11 666777777777666666666555 57777776651 3455666677777
Q ss_pred cCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccC
Q 001384 323 LSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFN 402 (1088)
Q Consensus 323 L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 402 (1088)
...|++....- .-++|+.|+.++|.++...+.. .-.+|+++++++|+++
T Consensus 206 c~rn~ls~l~~-----------------------------~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~ 254 (1081)
T KOG0618|consen 206 CERNQLSELEI-----------------------------SGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS 254 (1081)
T ss_pred hhhcccceEEe-----------------------------cCcchheeeeccCcceeecccc--ccccceeeecchhhhh
Confidence 77766653211 2245555555555555222111 1235556666666665
Q ss_pred CcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCch
Q 001384 403 GSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPE 480 (1088)
Q Consensus 403 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~ 480 (1088)
.+|++++.+.+|+.|+..+|+|+ .+|..+...++|+.|.+.+|.+. -+|+.+..+++|+.|+|..|+|. .+|+.
T Consensus 255 -~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~ 328 (1081)
T KOG0618|consen 255 -NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDN 328 (1081)
T ss_pred -cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchH
Confidence 45555566666666666666665 45555555566666666666665 45555555666666666666654 44543
No 321
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.7e-32 Score=301.17 Aligned_cols=263 Identities=24% Similarity=0.287 Sum_probs=196.9
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
|++.+.||+|++|.||+|.+. +|+.||+|++..... .....+.+|+++++. ++|||++++++++.++...++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~----l~~~~iv~~~~~~~~~~~~~iv 76 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKE----LNHPNIVRLLDVVHSENKLYLV 76 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHh----cCCCCccCHhheeccCCeEEEE
Confidence 667889999999999999975 789999999875432 223567889999986 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||++ ++|.+++.... .+++..++.++.|++.||+|||++ +++||||+|+||+++.++.++++|||.+......
T Consensus 77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~ 152 (283)
T cd07835 77 FEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVP 152 (283)
T ss_pred EeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCC
Confidence 99995 59999997765 689999999999999999999998 9999999999999999999999999998765322
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhh-ccCCC---------C
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVM-GYGRH---------G 1030 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~-~~~~~---------~ 1030 (1088)
.. ......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||.........+..... ..... .
T Consensus 153 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 153 VR-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred cc-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 11 1122346789999997755 35789999999999999999999999865442111110000 00000 0
Q ss_pred CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
........................+.+++.+|++.||++||+++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000000000011122357889999999999999999999975
No 322
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=9.8e-32 Score=293.37 Aligned_cols=247 Identities=28% Similarity=0.441 Sum_probs=205.3
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|++|.||+|+.. +++.||+|.+..... .....+.+|++++++ ++|||++++++++.++...++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~ 76 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKN----LKHPNIVKYIGSIETSDSLYI 76 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHh----CCCCCccEEEEEEEeCCEEEE
Confidence 4788899999999999999876 678999999987644 334578899999886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
||||+++++|.+++.....+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 77 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 77 ILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred EEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999999999998888899999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
.. .....++..|+|||...+..++.++||||+|+++|+|++|+.||.........|..... . .
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---~----~--------- 216 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD---D----H--------- 216 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc---C----C---------
Confidence 22 23356788999999988878899999999999999999999999765432222221100 0 0
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...+......+.+++.+|++.+|++||++.|++.
T Consensus 217 --~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 --PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0011223457888999999999999999999874
No 323
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.3e-32 Score=299.05 Aligned_cols=262 Identities=23% Similarity=0.242 Sum_probs=193.6
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--CeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--SEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~~~~l 882 (1088)
|++.+.||+|+||.||+|... +++.||+|+++.... ........|+.++.+. ..|+|++++++++.++ +..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l---~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRL---SPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhc---CCCCCccceEEEEecCCCCcEEE
Confidence 567889999999999999965 688999999876422 2223445677777763 2599999999999987 88999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++ ++.+++.. ...+++.+++.++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++.....
T Consensus 78 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 78 VFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred EEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 9999975 88888765 35689999999999999999999999 9999999999999999 99999999999866432
Q ss_pred CCcccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCC---------CC
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGR---------HG 1030 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~---------~~ 1030 (1088)
. ......++..|+|||... +..++.++||||+||++|||++|..||.+.+. ....+......... ..
T Consensus 153 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 153 P--PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred C--CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 2 223345788999999654 45678899999999999999999999987543 11122111110000 00
Q ss_pred CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......+.................+.+++.+|++++|++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000000000011234578999999999999999999999975
No 324
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=331.20 Aligned_cols=255 Identities=31% Similarity=0.464 Sum_probs=212.0
Q ss_pred CCCCccceecccCceEEEEEEeC----C----CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP----D----GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
++..+.+.+|+|+||.|++|... . ...||||.++..... ..+.+..|+++++.+. +|+||+.++|+|.
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g---~H~niv~llG~~t 372 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG---KHPNIVNLLGACT 372 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc---CCcchhhheeeec
Confidence 34455669999999999999842 1 457999999876444 4467999999999865 8999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCE
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDRT----------------RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNV 939 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NI 939 (1088)
.++..++|+||+..|+|.++++..+ .++..+...++.|||.||+||++. ++|||||.++||
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNV 449 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNV 449 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhE
Confidence 9999999999999999999997765 388999999999999999999999 999999999999
Q ss_pred EEcCCCCEEEeecccceeecCCCCccccccc--ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCc--h
Q 001384 940 LLDKEGKALVTDFGLARVVSAGDSHVSTTIA--GTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGE--E 1014 (1088)
Q Consensus 940 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~--~ 1014 (1088)
+++++..+||+|||+|+.....+.+...... -+..|||||.+....|+.++|||||||++||++| |..||.+-. +
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 9999999999999999976655444322222 3567999999999999999999999999999999 777876522 1
Q ss_pred hHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1015 CLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
.+.+ ....|.+...|..+..+++++++.||+.+|++||++.++++.++..+
T Consensus 530 ~l~~-------------------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 530 ELLE-------------------FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHHH-------------------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 1211 12233344557777889999999999999999999999999999854
No 325
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.9e-32 Score=300.76 Aligned_cols=240 Identities=29% Similarity=0.346 Sum_probs=191.9
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|+||+||+|..+ +|+.||+|.+..... .....+..|++++++ ++|||++++++++...+..|+||||++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEK----VSSRFIVSLAYAFETKDDLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHh----CCCCCEeeeeeEEecCCeEEEEEecCC
Confidence 689999999999865 689999999875432 223456789999986 679999999999999999999999999
Q ss_pred CCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccc
Q 001384 889 GGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVS 966 (1088)
Q Consensus 889 ~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 966 (1088)
+++|.+++.... .+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+..... ....
T Consensus 77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~ 151 (277)
T cd05577 77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKI 151 (277)
T ss_pred CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcc
Confidence 999999997755 689999999999999999999999 999999999999999999999999999876543 1222
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhhccCCCCCCccccchhhcCCC
Q 001384 967 TTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVMGYGRHGPGRAVIPVVLLGSG 1044 (1088)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1088)
....++..|+|||+..+..++.++||||+|+++|+|++|+.||...... ..+...... ...
T Consensus 152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~ 214 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL-----------------EMA 214 (277)
T ss_pred ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc-----------------ccc
Confidence 3345778999999988888999999999999999999999999765331 111111110 000
Q ss_pred ccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1045 LAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1045 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
...+......+.+++.+|++.||++|| ++.+++.
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 215 VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 011222345788999999999999999 6666653
No 326
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=7.3e-32 Score=309.28 Aligned_cols=263 Identities=23% Similarity=0.316 Sum_probs=199.1
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG-- 877 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~-- 877 (1088)
..++|+..+.||+|+||.||+|.+. +++.||+|++.+.. ......+.+|+.++.+ ++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~ 89 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKL----VNHKNIIGLLNVFTPQKS 89 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHh----cCCCCCcceeeeeccCCC
Confidence 4578999999999999999999975 78999999987532 2233467789999886 6799999999988643
Q ss_pred ----CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 878 ----SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 878 ----~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
...|+||||+++ +|.+.+... +++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 90 LEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred ccccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 357999999965 898888654 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC----
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH---- 1029 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 1029 (1088)
.++...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||...+. ...|..........
T Consensus 164 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 164 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred cceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHH
Confidence 998754321 22334678899999999988999999999999999999999999976532 22222111100000
Q ss_pred --------------C------CCccccchhhcCCC-ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 --------------G------PGRAVIPVVLLGSG-LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 --------------~------~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ...+..+....... ..........+.+++.+|++.||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 00000000000000 0001234567889999999999999999999985
No 327
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-33 Score=291.38 Aligned_cols=242 Identities=27% Similarity=0.350 Sum_probs=199.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHH---HHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGERE---FRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.+|....+||+|+||+|.+|..+ +.+.+|||+++++...+..+ .+.|-+++... -+-|.++++..+|+.-+..
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~---~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALP---GKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecC---CCCchHHHHHHHhhhhhhe
Confidence 36888999999999999999977 45679999999876554433 23455666543 2678999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|.||||+.||+|--.++.-+++.+..+..+|.+||-||-+||++ |||+||||.+|||+|.+|++||+|||+++.---
T Consensus 426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999999999999999999999999999999999999999 999999999999999999999999999975322
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
+...+.+++||+.|+|||++...+|+..+|+||+||++|||+.|++||++.++...- ..++ +
T Consensus 503 -~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF--~aI~------------e--- 564 (683)
T KOG0696|consen 503 -DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF--QAIM------------E--- 564 (683)
T ss_pred -CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHH------------H---
Confidence 334466789999999999999999999999999999999999999999987653221 1111 0
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCC
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPN 1072 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1072 (1088)
..-..|.....+.+.+.+..+.+.|.+|..
T Consensus 565 --hnvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 565 --HNVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred --ccCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 001113344567777888999999999963
No 328
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.5e-32 Score=298.70 Aligned_cols=247 Identities=25% Similarity=0.423 Sum_probs=199.3
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|+||.||+|..+ +|..||+|.+..... ...+.+.+|+++++. ++|+|++++++++..+...++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~----~~h~~i~~~~~~~~~~~~~~l 76 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAK----MKHPNIVTFFASFQENGRLFI 76 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHh----CCCCChhhhhheeccCCeEEE
Confidence 4788899999999999999976 588999999875422 234567889999986 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCC-EEEeecccceeec
Q 001384 883 VYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGK-ALVTDFGLARVVS 959 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~-~kl~Dfg~a~~~~ 959 (1088)
|+||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +++|+||||+||++++++. +|++|||.+....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 77 VMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 999999999999997643 479999999999999999999998 9999999999999998864 6999999987664
Q ss_pred CCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
... .......|++.|+|||+.....++.++||||+|+++|||++|+.||..... .++........ ..
T Consensus 154 ~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~--------~~-- 220 (257)
T cd08225 154 DSM-ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL--HQLVLKICQGY--------FA-- 220 (257)
T ss_pred CCc-ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHhccc--------CC--
Confidence 322 122334688899999998888899999999999999999999999976432 12222111000 00
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.........+.+++.+|++.+|++||++.|+++
T Consensus 221 ------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 221 ------PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 001123356888899999999999999999976
No 329
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-31 Score=301.34 Aligned_cols=246 Identities=29% Similarity=0.397 Sum_probs=196.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
..+|+..+.||+|+||.||+|... +++.||+|++..... ...+++.+|+++++. ++|||++++++++.+++.
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~----l~h~niv~~~~~~~~~~~ 89 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQ----LRHPNTIEYKGCYLREHT 89 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHh----CCCCCEEEEEEEEEeCCe
Confidence 356888899999999999999975 689999999864322 223468889999886 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.++||||++ |++.+++.. ...+++.++..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++...
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLV 165 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceec
Confidence 999999997 477777654 45689999999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCcccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQ---TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
... ....++..|+|||++. ...++.++||||||+++|||++|+.||.......... ... . ...
T Consensus 166 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~--~~~---~-~~~--- 231 (307)
T cd06607 166 SPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIA---Q-NDS--- 231 (307)
T ss_pred CCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH--HHh---c-CCC---
Confidence 322 2346788999999863 4578899999999999999999999997654321111 110 0 000
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
...........+.+++.+|++.+|++||++.+|+..
T Consensus 232 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 232 --------PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --------CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000122345678899999999999999999999873
No 330
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.1e-32 Score=302.03 Aligned_cols=250 Identities=27% Similarity=0.370 Sum_probs=198.4
Q ss_pred CCCccceecccCceEEEEEEeC----CCcEEEEEEccccCc----cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP----DGREVAVKKLQREGL----EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
+|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+..|++++.++. +|+||+++++++..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~~i~~~~~~~~~~ 77 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR---QSPFLVTLHYAFQTD 77 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc---cCCChhceeeEeecC
Confidence 4778899999999999999863 688999999875422 22356788999988742 699999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 878 SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
...++||||+++++|.+++.....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++..
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 78 TKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred CeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999999998888899999999999999999999998 999999999999999999999999999987
Q ss_pred ecCCCCcccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCcCCCCCch--hHHHHHHhhhccCCCCCCc
Q 001384 958 VSAGDSHVSTTIAGTVGYVAPEYGQT--WQATTKGDVYSFGVLAMELATGRRALEGGEE--CLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 1033 (1088)
.............++..|+|||.... ..++.++||||+|+++|+|++|+.||..... ...++........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~------ 228 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------ 228 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC------
Confidence 64433222334568889999998765 3467899999999999999999999964322 1222222221100
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
.+.+......+.+++.+|++.||++|| ++.+++.
T Consensus 229 -----------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 -----------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -----------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 001122345678899999999999997 6666654
No 331
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.5e-32 Score=301.51 Aligned_cols=263 Identities=24% Similarity=0.285 Sum_probs=195.7
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|+..+.||+|++|.||+|+.. +++.||||++..... .....+.+|++++++ ++||||+++++++.+++..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~~~ 76 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE----LNHPNIVKLLDVIHTENKLYL 76 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHh----cCCCCCcchhhhcccCCcEEE
Confidence 4788899999999999999975 688999999875432 223568889999987 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISD--RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||||++ ++|.+++.. ...+++..++.++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.+.....
T Consensus 77 v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~ 152 (284)
T cd07860 77 VFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 152 (284)
T ss_pred Eeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence 999996 589998865 34689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH--HHHHhhhccCCCC-------
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLV--EWGRRVMGYGRHG------- 1030 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~------- 1030 (1088)
... ......++..|+|||...+. .++.++||||||+++|||+||+.||....+... ....... .....
T Consensus 153 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 230 (284)
T cd07860 153 PVR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG-TPDEVVWPGVTS 230 (284)
T ss_pred Ccc-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC-CCChhhhhhhhH
Confidence 221 12233467889999977654 468899999999999999999999986543111 1111000 00000
Q ss_pred --CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 --PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 --~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....++.................+.+++.+|++.||++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 231 LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000000001112346778999999999999999999875
No 332
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3e-35 Score=321.24 Aligned_cols=268 Identities=28% Similarity=0.388 Sum_probs=186.6
Q ss_pred cCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCcc-ccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcC
Q 001384 246 LEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPA-EIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLS 324 (1088)
Q Consensus 246 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 324 (1088)
|+.||||+|++. ..|..+...+++-.|+|++|+|. .||. -|.+++.|-.|||++|++.. +|+.+..+..|++|+|+
T Consensus 105 Lt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~-LPPQ~RRL~~LqtL~Ls 181 (1255)
T KOG0444|consen 105 LTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEM-LPPQIRRLSMLQTLKLS 181 (1255)
T ss_pred ceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhh-cCHHHHHHhhhhhhhcC
Confidence 333444444433 44545555555555555555555 3332 23445555555555555433 34445555555555555
Q ss_pred CCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccC-CCCCccccCCcCcceeeccccccCC
Q 001384 325 SNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFT-GPLPVEISQMRSLKFLILAHNRFNG 403 (1088)
Q Consensus 325 ~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~ 403 (1088)
+|.+...- ...+..+++|+.|++++.+=+ ..+|.++..+.+|..+|+|.|.+.
T Consensus 182 ~NPL~hfQ-------------------------LrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp- 235 (1255)
T KOG0444|consen 182 NNPLNHFQ-------------------------LRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP- 235 (1255)
T ss_pred CChhhHHH-------------------------HhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-
Confidence 55543221 112233445556666655422 367888888888888888888888
Q ss_pred cCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCchhhc
Q 001384 404 SIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPEVMT 483 (1088)
Q Consensus 404 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~ 483 (1088)
.+|+.+.++++|+.|+||+|+|+ .+....+...+|++|+|+.|+++ .+|+.++.|+.|+.|.+.+|+|+
T Consensus 236 ~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~--------- 304 (1255)
T KOG0444|consen 236 IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT--------- 304 (1255)
T ss_pred cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc---------
Confidence 88888888889999999999988 56667777788999999999998 78999999999999988888886
Q ss_pred cCCCCCccccccccCCcccccCCccccccccccCCCCCCCcceeeehhccccchhhhhcccCCcccccccCCCcccceee
Q 001384 484 IGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPVCLPGLASRTFQI 563 (1088)
Q Consensus 484 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 563 (1088)
T Consensus 305 -------------------------------------------------------------------------------- 304 (1255)
T KOG0444|consen 305 -------------------------------------------------------------------------------- 304 (1255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCc-cceEEEccCCcccccCCccccCCccCcEEEccc
Q 001384 564 TGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQL-PLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSY 642 (1088)
Q Consensus 564 l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-~l~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 642 (1088)
+. -||..||+|.+|++++.++|.|. ..|+.+..+ +|+.|.|+.|++. .+|+.|.-|+.|+.|||..
T Consensus 305 ----------Fe-GiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlre 371 (1255)
T KOG0444|consen 305 ----------FE-GIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRE 371 (1255)
T ss_pred ----------cc-CCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccC
Confidence 00 36777888888888888888888 788888777 7888889999888 8999999999999999999
Q ss_pred cccC
Q 001384 643 NNFS 646 (1088)
Q Consensus 643 N~l~ 646 (1088)
|.=-
T Consensus 372 NpnL 375 (1255)
T KOG0444|consen 372 NPNL 375 (1255)
T ss_pred CcCc
Confidence 8643
No 333
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.4e-32 Score=295.41 Aligned_cols=247 Identities=28% Similarity=0.459 Sum_probs=204.0
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|+||.||+|.+. +++.||+|++..... .....+..|+++++. ++|||++++++.+..+...++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~~~~~~~~~~~~~~~~l 76 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKK----LNHPNIIKYYESFEEKGKLCI 76 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHh----cCCCChhheEEEEecCCEEEE
Confidence 5788899999999999999976 688999999986543 345678889999886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 883 VYEYMEGGSLEDIISDR----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
|+||+++++|.++++.. ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+...
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 77 VMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153 (258)
T ss_pred EEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeec
Confidence 99999999999999764 6799999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.... .......+++.|+|||......++.++||||+|+++|+|++|+.||...+. .+.........
T Consensus 154 ~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~~~----------- 219 (258)
T cd08215 154 SSTV-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--LELALKILKGQ----------- 219 (258)
T ss_pred ccCc-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--HHHHHHHhcCC-----------
Confidence 5432 223345688899999998888899999999999999999999999976542 11111111000
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+......+.+++.+|++.+|++||++.|+++
T Consensus 220 -----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 220 -----YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00011233467888999999999999999999975
No 334
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.9e-31 Score=291.94 Aligned_cols=250 Identities=26% Similarity=0.439 Sum_probs=205.9
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--CeE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--SEK 880 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~~~ 880 (1088)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++ ++||||+++++++... ...
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~ 76 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS----LQHPNIVRYYGSERDEEKNTL 76 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHH----cCCCCEeeEEEEEecCCCCeE
Confidence 4778899999999999999976 689999999876543 335678899999987 6799999999999988 889
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++|+||+++++|.+++.....+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 77 NIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999999998877899999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCc-ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 961 GDSH-VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 961 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
.... ......++..|+|||......++.++||||+|+++|+|++|+.||.......... .... ...
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~---~~~--------- 220 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL-YKIG---SSG--------- 220 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH-Hhcc---ccC---------
Confidence 3321 1234567889999999988889999999999999999999999998754211111 1110 000
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+......+.+++.+|++.+|++||++.|+++
T Consensus 221 ---~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 221 ---EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 000112233568899999999999999999999975
No 335
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.9e-32 Score=303.59 Aligned_cols=255 Identities=27% Similarity=0.341 Sum_probs=203.0
Q ss_pred CCCccceecccCceEEEEEEeC----CCcEEEEEEccccCc----cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP----DGREVAVKKLQREGL----EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
+|++.+.||+|++|.||+|+.. +++.||||++++... ...+.+..|++++.++. +||||+++++++..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~---~~~~i~~~~~~~~~~ 77 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR---RCPFLVTLHYAFQTD 77 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc---CCcchhhhheeeecC
Confidence 4778899999999999999853 568899999875422 22356788999988742 699999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 878 SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
...++||||+++|+|.+++.....+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++++|||+++.
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 78 TKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred CEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999999998877899999999999999999999998 999999999999999999999999999877
Q ss_pred ecCCCCcccccccccccccCccccCCCC--CCcchhHHHHHHHHHHHHhCCcCCCCCch--hHHHHHHhhhccCCCCCCc
Q 001384 958 VSAGDSHVSTTIAGTVGYVAPEYGQTWQ--ATTKGDVYSFGVLAMELATGRRALEGGEE--CLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 1033 (1088)
.............++..|+|||...+.. .+.++||||+|+++|||++|+.||..... ...++.......
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 227 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS------- 227 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-------
Confidence 5443332233456788999999877654 78899999999999999999999964322 112222222110
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
..+.+......+.+++.+|++.||++||++.++.+.|+..
T Consensus 228 ----------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 ----------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ----------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0011222345678899999999999999999888777654
No 336
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.2e-32 Score=299.08 Aligned_cols=243 Identities=26% Similarity=0.311 Sum_probs=189.5
Q ss_pred eecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEec
Q 001384 812 IIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYM 887 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~ 887 (1088)
+||+|+||.||+|... +++.||+|.+.+.... .+..+..|..++.... ...||+|+++++++.+++..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS-TGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHH-hCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 4899999999999975 5889999998764322 1222344443333211 247999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcccc
Q 001384 888 EGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVST 967 (1088)
Q Consensus 888 ~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 967 (1088)
++|+|.+++.....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~ 153 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH 153 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---Cc
Confidence 9999999998888899999999999999999999998 99999999999999999999999999987653221 22
Q ss_pred cccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 968 TIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 968 ~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
...|+..|+|||.+.++ .++.++||||+|+++|||++|+.||...... .......... ...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~ 216 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-----------------MAV 216 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc-----------------cCC
Confidence 34688999999988644 6899999999999999999999999865321 1111111110 000
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCC-----CHHHHHH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARP-----NVKEVLA 1078 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1078 (1088)
..+......+.+++.+|+..+|.+|| ++.|+++
T Consensus 217 ~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 217 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 11122346788899999999999999 9999875
No 337
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=1e-31 Score=300.04 Aligned_cols=262 Identities=25% Similarity=0.266 Sum_probs=196.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--Ce
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--SE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~~ 879 (1088)
++|++.+.||+|+||.||+|.++ +++.+|+|.++..... ....+.+|+.++.+ ++||||+++++++..+ ..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~h~ni~~~~~~~~~~~~~~ 80 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLK----LQHPNIVTVKEVVVGSNLDK 80 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHh----cCCCCEEEEEEEEEecCCCc
Confidence 46888999999999999999986 5889999999754322 22356789998886 6799999999998877 88
Q ss_pred EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 880 KILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
.|+||||+++ +|.+++.... .+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 81 ~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 81 IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 9999999975 9999987644 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH-HHHHhhhc-----------
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLV-EWGRRVMG----------- 1025 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~-~~~~~~~~----------- 1025 (1088)
.... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||........ .-......
T Consensus 157 ~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 157 GSPL-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred cCCc-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 5432 122334568899999987653 468999999999999999999999986543111 00000000
Q ss_pred -cCCC--CCCccccchhhcCCCccccHH-HHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1026 -YGRH--GPGRAVIPVVLLGSGLAEGAE-EMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1026 -~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.... .............. .+.. ....+.+++.+|++.||++||++.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKK---FPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhcc---ccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000 00000000000000 0111 2456788999999999999999999975
No 338
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.98 E-value=1.5e-31 Score=299.19 Aligned_cols=263 Identities=23% Similarity=0.259 Sum_probs=194.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe--
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE-- 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~-- 879 (1088)
++|++.+.||+|+||.||+|.+. +++.||+|++...... ....+.+|+.+++.+. +||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~---~~~~i~~~~~~~~~~~~~~ 77 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS---ESIYIVRLLDVEHVEEKNG 77 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc---CCCCccceeeeEeecCCCC
Confidence 46889999999999999999975 6899999998754322 2356788999998743 57999999999887665
Q ss_pred ---EEEEEEecCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-CCCEEEe
Q 001384 880 ---KILVYEYMEGGSLEDIISDR-----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-EGKALVT 950 (1088)
Q Consensus 880 ---~~lv~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-~~~~kl~ 950 (1088)
.|+||||+++ +|.+++... ..+++..++.++.||+.||+|||++ +|+||||+|+||+++. ++.+||+
T Consensus 78 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~ 153 (295)
T cd07837 78 KPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIA 153 (295)
T ss_pred CceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEe
Confidence 7999999986 898887642 3579999999999999999999999 9999999999999998 8999999
Q ss_pred ecccceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC
Q 001384 951 DFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH 1029 (1088)
Q Consensus 951 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1088)
|||.++.+..... ......+++.|+|||++.+ ..++.++||||+|+++|+|++|..||.+..+.. +...... ...
T Consensus 154 dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~-~~~- 229 (295)
T cd07837 154 DLGLGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFK-LLG- 229 (295)
T ss_pred ecccceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHH-HhC-
Confidence 9999886543211 1222346788999997654 567999999999999999999999998754321 1111110 000
Q ss_pred CCCccccchh--------hcCCC----ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 GPGRAVIPVV--------LLGSG----LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 ~~~~~~~~~~--------~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+.. ..... .........++.++|.+|+++||.+||+++|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 230 TPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 00000 0001123466889999999999999999999875
No 339
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=8.2e-32 Score=300.47 Aligned_cols=254 Identities=18% Similarity=0.254 Sum_probs=185.8
Q ss_pred cCCCCccceecccCceEEEEEEeCC----CcEEEEEEccccCccc--hHHH------HHHHHHHhCCCCCCCCCceeEEe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPD----GREVAVKKLQREGLEG--EREF------RAEMEVLSGNGFGWPHPNLVTLY 871 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~--~~~~------~~E~~~l~~~~~~l~h~niv~l~ 871 (1088)
.++|++.++||+|+||+||+|.+.+ +..+|+|+........ +... ..++..+.... .+.|+++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~-~~~h~~i~~~~ 89 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIH-NIDHLGIPKYY 89 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhc-cCCCCCCCcEE
Confidence 3679999999999999999999754 3456666543221111 1000 11122121111 36899999999
Q ss_pred eEEecCC----eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCE
Q 001384 872 GWCLDGS----EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKA 947 (1088)
Q Consensus 872 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~ 947 (1088)
+++.... ..++++|++.. ++.+.++.....++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcE
Confidence 9766543 34788888754 7778777666678999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeecCCCCc------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch--hHH--
Q 001384 948 LVTDFGLARVVSAGDSH------VSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEE--CLV-- 1017 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~--~~~-- 1017 (1088)
+|+|||+|+.+...... ......||+.|+|||+..+..++.++||||+||++|||++|+.||.+... ...
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 99999999876432211 11234689999999999999999999999999999999999999987532 111
Q ss_pred ---HHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1018 ---EWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1018 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
++..... .+. ......+..+.+++..|++.+|++||+++++++.+
T Consensus 246 ~~~~~~~~~~----------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AKCDFIKRLH----------------EGK--IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHHHHHHHhh----------------hhh--hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1111110 000 00112346788899999999999999999999876
No 340
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.98 E-value=1.6e-31 Score=300.83 Aligned_cols=266 Identities=27% Similarity=0.312 Sum_probs=196.0
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--C
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--S 878 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~ 878 (1088)
.++|++.+.||+|+||.||+|.++ +|+.||+|++...... ....+.+|++++++ ++|+|++++++++.+. +
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~ 81 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLN----LRHPNIVELKEVVVGKHLD 81 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHh----CCCCCCcceEEEEecCCCC
Confidence 357999999999999999999975 6899999998754322 22356679999986 6799999999998765 5
Q ss_pred eEEEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 EKILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..++||||+++ +|.+++.. ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 82 ~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 82 SIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred eEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeee
Confidence 68999999975 89888875 35689999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH-HHHHhhhccCCCCCC--c
Q 001384 958 VSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLV-EWGRRVMGYGRHGPG--R 1033 (1088)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~--~ 1033 (1088)
...... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+.+.... .-............. .
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 158 YGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred cCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 654321 2223345778999998754 5678999999999999999999999986544111 111111000000000 0
Q ss_pred cccc----hhhcCCCcc----ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIP----VVLLGSGLA----EGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~----~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...+ ......... ........+.+++.+|++.||++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 000000000 00112456778999999999999999999975
No 341
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=2.1e-31 Score=296.57 Aligned_cols=264 Identities=25% Similarity=0.294 Sum_probs=198.7
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--CeEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--SEKI 881 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--~~~~ 881 (1088)
|++.+.||+|++|.||+|+.. +++.+|+|++.... ......+.+|+++++. ++|||++++++++.+. +..+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~~ 76 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQK----LRHPNIVRLKEIVTSKGKGSIY 76 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHh----ccCCCeeeheeeEecCCCCcEE
Confidence 567889999999999999976 58899999998763 2334568889999986 6799999999999988 8899
Q ss_pred EEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+||||+++ +|.+++... ..+++.+++.++.|++.|++|||+. +++|+||+|+||++++++.+|++|||.+.....
T Consensus 77 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 77 MVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred EEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 99999975 899988765 5799999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCCCCCccccc-
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRHGPGRAVIP- 1037 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~- 1037 (1088)
..........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ......................
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 43222334456788999997654 46789999999999999999999999875431 1111111110000000000000
Q ss_pred ---hhhcCCC------ccccHH-HHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1038 ---VVLLGSG------LAEGAE-EMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1038 ---~~~~~~~------~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....... ...... ....+.+++.+|++.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000 000011 2567889999999999999999999975
No 342
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=1.3e-31 Score=294.32 Aligned_cols=249 Identities=23% Similarity=0.332 Sum_probs=198.1
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-----ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC-
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-----LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG- 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~- 877 (1088)
.+|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++ ++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~----l~h~~i~~~~~~~~~~~ 77 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKN----LRHDRIVQYYGCLRDPE 77 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHH----cCCCCcceEEEEEEcCC
Confidence 47889999999999999999975 68999999875321 1223568889999987 6799999999998764
Q ss_pred -CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 -SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++||||+++++|.+++.....+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.++
T Consensus 78 ~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 78 EKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 46789999999999999998877899999999999999999999999 99999999999999999999999999997
Q ss_pred eecCCC--CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 957 VVSAGD--SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
...... ........++..|+|||...+..++.++||||||+++|+|++|+.||........ . ..... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~-~~~~~----~~--- 225 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA-I-FKIAT----QP--- 225 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH-H-HHHHc----CC---
Confidence 653211 1112235688899999999888899999999999999999999999976533111 1 11110 00
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+......+.+++.+|++ +|.+||++.+++.
T Consensus 226 --------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 --------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred --------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0011123344678889999999 5799999998764
No 343
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=8.1e-32 Score=294.45 Aligned_cols=245 Identities=28% Similarity=0.393 Sum_probs=201.8
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|++.+.||+|+||.||+++.. +++.+|+|++..... ....++..|+++++. ++|+||+++++++.+....++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILAS----VNHPNIISYKEAFLDGNKLCI 76 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHh----CCCCCchhhhhhhccCCEEEE
Confidence 4788899999999999999865 678999999876432 233467788888886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 883 VYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
||||+++++|.+++.+ ...+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||++...
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 77 VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVL 153 (256)
T ss_pred EehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhh
Confidence 9999999999999866 35689999999999999999999999 9999999999999999999999999999776
Q ss_pred cCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
... ......++..|+|||...+..++.++|+||+|+++|+|++|+.||...+.... ......
T Consensus 154 ~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~--~~~~~~------------- 215 (256)
T cd08530 154 KKN---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL--RYKVQR------------- 215 (256)
T ss_pred ccC---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHhc-------------
Confidence 543 22234578899999999988999999999999999999999999986543211 111110
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
......+.....++.+++.+|++.+|++||++.|+++
T Consensus 216 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 216 ---GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ---CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0001112345567899999999999999999999875
No 344
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.98 E-value=8.6e-32 Score=295.78 Aligned_cols=245 Identities=26% Similarity=0.372 Sum_probs=196.9
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|+||.||+|++. +|+.+|+|++..... ...+.+.+|++++++ +.|||++++++.+..+...|+||||++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~----~~h~~i~~~~~~~~~~~~~~lv~e~~~ 76 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQ----AQSPYVVKLYYSFQGKKNLYLVMEYLP 76 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHh----CCCcchhHHHHheecCcEEEEEEecCC
Confidence 689999999999987 489999999976543 234568888888886 679999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC-----
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS----- 963 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~----- 963 (1088)
+++|.+++++...+++..+..++.|++.||+|||+. +++||||+|+||++++++.++++|||++........
T Consensus 77 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 77 GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 999999998877899999999999999999999999 999999999999999999999999999876433211
Q ss_pred --cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 964 --HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 964 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
.......++..|+|||......++.++||||||+++|++++|+.||...... +........... .+
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~~~~~------~~---- 221 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--EIFQNILNGKIE------WP---- 221 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCCcC------CC----
Confidence 1223346788999999988888999999999999999999999999765431 111121110000 00
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
........+.+++.+|++.+|++||++.++.+.|+
T Consensus 222 -----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 222 -----EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -----ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00012467889999999999999999966655554
No 345
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=6.8e-32 Score=307.42 Aligned_cols=272 Identities=23% Similarity=0.308 Sum_probs=198.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC----
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG---- 877 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~---- 877 (1088)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ......+..|+.++++ ++||||+++++++...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRR----FKHENIIGILDIIRPPSFES 79 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHh----CCCCCcCchhheeecccccc
Confidence 468999999999999999999965 68999999986432 2233567789999987 6799999999987654
Q ss_pred -CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 -SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++|+||+++ ++.+++.. .++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 357999999975 88888754 4689999999999999999999999 99999999999999999999999999998
Q ss_pred eecCCCCcc--cccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCCCCC
Q 001384 957 VVSAGDSHV--STTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 957 ~~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 1032 (1088)
......... .....++..|+|||.+. ...++.++||||+||++|+|++|+.||.+.... ...+.............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 754322211 22356788999999754 456899999999999999999999999764321 11111111100000000
Q ss_pred ccccchh----h----cCCCcc---ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH--HHhhC
Q 001384 1033 RAVIPVV----L----LGSGLA---EGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM--LIKIL 1084 (1088)
Q Consensus 1033 ~~~~~~~----~----~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~i~ 1084 (1088)
....... . ...... .......++.+++.+|++.||++||++.|+++. ++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 0000000 0 000000 001224568899999999999999999999875 54443
No 346
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=6e-32 Score=307.58 Aligned_cols=267 Identities=23% Similarity=0.282 Sum_probs=199.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec----
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD---- 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~---- 876 (1088)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+..|+.++.+ ++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~ 79 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRH----FKHDNIIAIRDILRPPGAD 79 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHh----cCCCCccCHHHhccccCCC
Confidence 468999999999999999999975 689999999876432 334567789999986 679999999998763
Q ss_pred CCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 877 GSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
....++||||+. |+|.+++.....+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 80 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 80 FKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred CceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 346899999996 59999998878899999999999999999999998 99999999999999999999999999997
Q ss_pred eecCCCCc---ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH-HHHHhhhccCCCCC
Q 001384 957 VVSAGDSH---VSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLV-EWGRRVMGYGRHGP 1031 (1088)
Q Consensus 957 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~ 1031 (1088)
........ ......++..|+|||.+.. ..++.++||||+|+++|||++|+.||.+...... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 76432211 1233468889999998655 4689999999999999999999999976543111 11011000000000
Q ss_pred Cccccchh------hcCCCccc-----cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAVIPVV------LLGSGLAE-----GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~~~~~------~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
........ ........ ......++.+++.+|++.+|++||+++|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000000 00000000 1123567899999999999999999999876
No 347
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=1.6e-31 Score=297.69 Aligned_cols=243 Identities=27% Similarity=0.421 Sum_probs=196.7
Q ss_pred cceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 810 DRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
..+||+|+||.||+|..+ +++.||||++..........+.+|+.+++. ++|+|++++++++..++..++||||++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD----YQHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHh----cCCcchhheeeEEEeCCEEEEEEecCC
Confidence 367999999999999875 789999999865544455678889998886 679999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccc
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
+++|.+++.. .++++..++.++.|++.|++|||+. +++||||+|+||++++++.++++|||++....... .....
T Consensus 101 ~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~ 175 (292)
T cd06657 101 GGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKS 175 (292)
T ss_pred CCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccc
Confidence 9999998754 4689999999999999999999999 99999999999999999999999999987654322 12234
Q ss_pred ccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCCCCCCccccchhhcCCCccc
Q 001384 969 IAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAE 1047 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1088)
..++..|+|||...+..++.++||||+|+++|+|++|+.||.+.... ......... +.. ...
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~------------~~~-----~~~ 238 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL------------PPK-----LKN 238 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC------------Ccc-----cCC
Confidence 56788999999988888999999999999999999999999865331 111111111 000 000
Q ss_pred cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1048 GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1048 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+.+++.+|++.+|.+||++.|+++
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 1122346778899999999999999999986
No 348
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=7.2e-32 Score=321.22 Aligned_cols=269 Identities=16% Similarity=0.197 Sum_probs=188.4
Q ss_pred HHcCCCCccceecccCceEEEEEEeCC--CcEEEEEE--------------ccc---cCccchHHHHHHHHHHhCCCCCC
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLPD--GREVAVKK--------------LQR---EGLEGEREFRAEMEVLSGNGFGW 862 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~--------------~~~---~~~~~~~~~~~E~~~l~~~~~~l 862 (1088)
...++|++.+.||+|+||+||+|..+. +..+++|. +.+ ........+.+|++++.+ +
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~----l 220 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR----L 220 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh----C
Confidence 345789999999999999999987542 22222221 111 111223467889999987 6
Q ss_pred CCCceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 001384 863 PHPNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDR-----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKAS 937 (1088)
Q Consensus 863 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~ 937 (1088)
+||||+++++++...+..|+|+|++. ++|.+++... ......+++.++.|++.||+|||++ +||||||||+
T Consensus 221 ~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~ 296 (501)
T PHA03210 221 NHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLE 296 (501)
T ss_pred CCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 89999999999999999999999995 4888777542 2244667889999999999999999 9999999999
Q ss_pred CEEEcCCCCEEEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCC-CCch-h
Q 001384 938 NVLLDKEGKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALE-GGEE-C 1015 (1088)
Q Consensus 938 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~-~~~~-~ 1015 (1088)
|||++.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|+.++. .... .
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 9999999999999999998775443333345679999999999999899999999999999999999886543 2221 1
Q ss_pred HHHHHHhhhccCCCC-CCc----cccchh---hcCCCccc------cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1016 LVEWGRRVMGYGRHG-PGR----AVIPVV---LLGSGLAE------GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1016 ~~~~~~~~~~~~~~~-~~~----~~~~~~---~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..+............ ... ...+.. ........ ......++.+++.+|++.||.+||++.|+++
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 111111111000000 000 000000 00000000 0011235677888999999999999999986
No 349
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=7.9e-32 Score=298.80 Aligned_cols=248 Identities=28% Similarity=0.420 Sum_probs=202.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCC-CCceeEEeeEEecCCe
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWP-HPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~-h~niv~l~~~~~~~~~ 879 (1088)
++|.+.+.||+|+||.||+|..+ +++.||+|++..... ...+.+..|.+++++ +. ||||+++++++..++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~----l~~~~~i~~~~~~~~~~~~ 76 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTR----LNGHPGIIKLYYTFQDEEN 76 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHh----cccCCCchhHHHHhcCCce
Confidence 46888999999999999999976 689999999876432 223567888888886 45 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 880 KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
.++||||+++++|.+++.+...+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 77 LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999999999888899999999999999999999998 99999999999999999999999999988664
Q ss_pred CCCC-------------------cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHH
Q 001384 960 AGDS-------------------HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWG 1020 (1088)
Q Consensus 960 ~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~ 1020 (1088)
.... .......++..|+|||......++.++||||+|++++++++|+.||........ .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~- 231 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-F- 231 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-H-
Confidence 3221 112234578899999998888899999999999999999999999987643111 1
Q ss_pred HhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCH----HHHHH
Q 001384 1021 RRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNV----KEVLA 1078 (1088)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~eil~ 1078 (1088)
..... .. ...+......+.+++.+|++.+|.+||++ +++++
T Consensus 232 ~~~~~------~~-----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 232 QKILK------LE-----------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHh------cC-----------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11110 00 01112234678899999999999999999 66653
No 350
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=2.7e-31 Score=296.81 Aligned_cols=264 Identities=22% Similarity=0.284 Sum_probs=194.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
++|++.+.||+|++|.||+|.++ +++.||+|++..... .....+.+|++++++ ++||||+++++++.++...+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~ 77 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKE----MQHGNIVRLQDVVHSEKRLY 77 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHh----ccCCCEeeEEEEEecCCeEE
Confidence 46889999999999999999976 688999999875432 223567889999986 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-CCCEEEeecccceee
Q 001384 882 LVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-EGKALVTDFGLARVV 958 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-~~~~kl~Dfg~a~~~ 958 (1088)
+||||++ ++|.+++.... .+++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+|++|||++...
T Consensus 78 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 78 LVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred EEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 9999996 48888876543 357888899999999999999999 9999999999999985 567999999999765
Q ss_pred cCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhh--hccCCCC--CCc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRV--MGYGRHG--PGR 1033 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~--~~~~~~~--~~~ 1033 (1088)
.... .......++..|+|||.+.+ ..++.++||||+|+++|+|+||+.||....+.. +..... ....... ...
T Consensus 154 ~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 154 GIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred CCCc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhcccc
Confidence 3221 11223456889999998765 467899999999999999999999998654321 111110 0000000 000
Q ss_pred -------cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 -------AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 -------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...+................++.+++.+|++.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000000001123456788999999999999999999975
No 351
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=9.4e-32 Score=306.24 Aligned_cols=271 Identities=24% Similarity=0.289 Sum_probs=201.3
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC---
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--- 877 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--- 877 (1088)
..+|.+.+.||+|+||+||+|++. +++.||||++.... ......+..|+.+++. ++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~ni~~~~~~~~~~~~~ 79 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRH----LDHENVIAIKDIMPPPHRE 79 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHh----cCCCCccchHHheeccccc
Confidence 457999999999999999999975 68999999987532 2233466789998886 6799999999987654
Q ss_pred --CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 878 --SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 878 --~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
...++||||+. ++|.+++....++++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 80 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 80 AFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred ccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 35799999996 69999998888899999999999999999999999 9999999999999999999999999999
Q ss_pred eeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCC-----
Q 001384 956 RVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGR----- 1028 (1088)
Q Consensus 956 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~----- 1028 (1088)
+...... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||.+.+.. .............
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 156 RTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred cccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 8764332 22234567889999997654 46889999999999999999999999765321 0000000000000
Q ss_pred ---CCCCccccch---hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH--HHhh
Q 001384 1029 ---HGPGRAVIPV---VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM--LIKI 1083 (1088)
Q Consensus 1029 ---~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~i 1083 (1088)
.......... ...............++.+++.+|++.+|++||+++|+++. ++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0000000000 00000000112344678899999999999999999999865 5544
No 352
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=1.6e-31 Score=297.81 Aligned_cols=253 Identities=27% Similarity=0.401 Sum_probs=192.8
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
+|+..+.||+|+||.||++.+. +++.||+|++..... .....+..|+.++.+.. .||||+++++++..+...+++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS---DCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc---CCCCEeeeeeEEecCCcEEEE
Confidence 3455688999999999999975 689999999875432 33456888988887632 599999999999999999999
Q ss_pred EEecCCCCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 884 YEYMEGGSLEDIIS-----DRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
|||++. ++.++.. ....+++..+..++.|++.||+|||+.+ +++||||||+||+++.++.++|+|||+++..
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 999864 6655432 2356999999999999999999999743 8999999999999999999999999998765
Q ss_pred cCCCCcccccccccccccCccccCCC---CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 959 SAGDSHVSTTIAGTVGYVAPEYGQTW---QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
.... ......++..|+|||.+.+. .++.++||||+|+++|||++|+.||....... +....... . ..
T Consensus 159 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~--~-~~---- 228 (288)
T cd06616 159 VDSI--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF-DQLTQVVK--G-DP---- 228 (288)
T ss_pred ccCC--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH-HHHhhhcC--C-CC----
Confidence 4221 22334578899999988765 68999999999999999999999997643211 11111110 0 00
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
+ ... .........++.+++.+|++.||++||+++||++.
T Consensus 229 -~-~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 -P-ILS---NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -C-cCC---CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 00112345678899999999999999999999763
No 353
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.98 E-value=2.3e-31 Score=295.77 Aligned_cols=263 Identities=23% Similarity=0.316 Sum_probs=196.9
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
+|++.+.||+|++|.||+|++. +|+.||||++...... ....+.+|++++++ ++||||+++++++.+.+..++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~~lv 76 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKE----LKHENIVRLHDVIHTENKLMLV 76 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHh----hcCCCEeeeeeeEeeCCcEEEE
Confidence 4788899999999999999986 6889999999765322 34567789999986 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 884 YEYMEGGSLEDIISDR---TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|||+++ +|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||++.....
T Consensus 77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGI 152 (284)
T ss_pred EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence 999985 899988654 3589999999999999999999998 999999999999999999999999999876533
Q ss_pred CCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHh--hhccCCC--------
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRR--VMGYGRH-------- 1029 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~--~~~~~~~-------- 1029 (1088)
... ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||.+.... ...... .......
T Consensus 153 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 153 PVN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred Ccc-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhc
Confidence 211 1223456789999997755 45788999999999999999999999865321 111000 0000000
Q ss_pred -CCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 -GPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+...........+.....+.+++.+|++.||++||++.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000000000001223467889999999999999999999874
No 354
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=2.6e-31 Score=298.24 Aligned_cols=269 Identities=25% Similarity=0.283 Sum_probs=197.9
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
...++|++.+.||+|+||.||+|..+ +|+.||+|+++.... .....+.+|++++++ ++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~----l~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ----LNHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHh----CCCCCeeeeeheecCcc
Confidence 34568999999999999999999986 588999999975432 223567789998886 67999999999987654
Q ss_pred ----------eEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCE
Q 001384 879 ----------EKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKA 947 (1088)
Q Consensus 879 ----------~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~ 947 (1088)
..++|+||+++ ++.+.+... ..+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 80 DALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred hhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcE
Confidence 78999999986 777777653 4689999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhc
Q 001384 948 LVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMG 1025 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~ 1025 (1088)
||+|||.+...............++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+.. ..........
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T cd07864 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG 235 (302)
T ss_pred EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999999998765433222233456778999997654 45789999999999999999999999865431 1111111110
Q ss_pred cCCCCCCccc--------cchhhc--CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1026 YGRHGPGRAV--------IPVVLL--GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1026 ~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......... .+.... ..........+..+.+++.+|++.||.+||++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000000 000000 0000001112457889999999999999999999875
No 355
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=1.9e-31 Score=301.38 Aligned_cols=200 Identities=27% Similarity=0.389 Sum_probs=167.3
Q ss_pred CCCccceecccCceEEEEEEeCC---CcEEEEEEccccC---ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC--
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPD---GREVAVKKLQREG---LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG-- 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~-- 877 (1088)
+|++.+.||+|+||.||+|..+. ++.||+|.+.... ......+.+|+.++.. ++||||+++++++.+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~ 76 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRE----LKHENVVSLVEVFLEHAD 76 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHh----cCCCCccceEEEEeCCCC
Confidence 47888999999999999999754 7899999998743 2233567789998886 6799999999999988
Q ss_pred CeEEEEEEecCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC----CCCEE
Q 001384 878 SEKILVYEYMEGGSLEDIISDR-----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK----EGKAL 948 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~----~~~~k 948 (1088)
...++||||+++ ++.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++. ++.+|
T Consensus 77 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 77 KSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred ceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 889999999975 777766432 2588999999999999999999999 9999999999999999 99999
Q ss_pred EeecccceeecCCCC--cccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCc
Q 001384 949 VTDFGLARVVSAGDS--HVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGE 1013 (1088)
Q Consensus 949 l~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~ 1013 (1088)
++|||++........ .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+..
T Consensus 153 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 153 IGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 999999886543222 11233567889999997655 467899999999999999999999997653
No 356
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=7.6e-31 Score=296.17 Aligned_cols=245 Identities=28% Similarity=0.391 Sum_probs=194.9
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
|+..+.||+|+||.||+|++. ++..||+|++...... ...++..|+++++. ++|||++++++++.++...++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~~l 102 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQR----IKHPNSIEYKGCYLREHTAWL 102 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHh----CCCCCEEEEEEEEeeCCeEEE
Confidence 677789999999999999965 6889999998754222 23467889999886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++ ++.+.+.. ..++++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 103 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~- 177 (317)
T cd06635 103 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP- 177 (317)
T ss_pred EEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC-
Confidence 9999975 88877754 55689999999999999999999999 999999999999999999999999998865432
Q ss_pred CCcccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQ---TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.....++..|+|||++. ...++.++|||||||++|||++|+.||........ ...... ...
T Consensus 178 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~-~~~---------- 241 (317)
T cd06635 178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQ-NES---------- 241 (317)
T ss_pred ----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHh-ccC----------
Confidence 22345788999999863 45789999999999999999999999976533111 111110 000
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLI 1081 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1081 (1088)
...........+.+++.+|++.+|.+||++.|+++...
T Consensus 242 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 242 -----PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred -----CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 00011223456888999999999999999999997543
No 357
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=6.3e-31 Score=292.76 Aligned_cols=264 Identities=29% Similarity=0.338 Sum_probs=196.7
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe----
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE---- 879 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~---- 879 (1088)
|++.+.||+|+||.||+|+++ +++.||+|++...... ....+.+|+.++.++. .+.|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLE-SFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhh-ccCCCCcceEEEEEeeccCCCCc
Confidence 567889999999999999987 4899999999754222 1235667777776543 3579999999999988776
Q ss_pred -EEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 880 -KILVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 880 -~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
.+++|||+++ +|.++++... .+++.+++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||.+.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcce
Confidence 8999999975 8999887643 589999999999999999999999 99999999999999999999999999998
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC----CC
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG----PG 1032 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~ 1032 (1088)
...... ......++..|+|||...+..++.++||||||+++|||++|+.||.+..+. ....+......... ..
T Consensus 156 ~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 156 IYSFEM--ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred eccCCc--ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCC
Confidence 764322 122335788999999998888999999999999999999999999865431 11111110000000 00
Q ss_pred c-----cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1033 R-----AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1033 ~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ...+.................+.+++.+|++.||.+||+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 000000000001111233467789999999999999999999874
No 358
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=4.6e-31 Score=295.10 Aligned_cols=252 Identities=25% Similarity=0.434 Sum_probs=193.8
Q ss_pred CCCCccceecccCceEEEEEEeCC-CcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD-GREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++|++.+.||+|+||.||+|.+++ ++.||||++..... .....+..|+.++.+. ..||||+++++++.++...++
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS---HDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc---cCCCchHhhheeeecCCeEEE
Confidence 568889999999999999999874 89999999976432 2334556677666542 369999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+++ ++.+++.. ...+++..+..++.|++.|++|||+.+ +|+||||+|+||++++++.+||+|||++..+...
T Consensus 92 v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 92 CMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred EeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9999954 78877755 457899999999999999999999742 8999999999999999999999999998765432
Q ss_pred CCcccccccccccccCccccCCCC----CCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQ----ATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
.. .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||....... +.......... . ..+
T Consensus 169 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~--~---~~~ 240 (296)
T cd06618 169 KA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-EVLTKILQEEP--P---SLP 240 (296)
T ss_pred Cc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-HHHHHHhcCCC--C---CCC
Confidence 21 22335778999999887543 7889999999999999999999997643221 11111110000 0 000
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.......++.+++.+|++.||.+||++.++++.
T Consensus 241 ---------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 241 ---------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011234578899999999999999999999764
No 359
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=4.1e-31 Score=301.04 Aligned_cols=266 Identities=22% Similarity=0.277 Sum_probs=196.8
Q ss_pred CCCCc-cceecccCceEEEEEEeC-CCcEEEEEEccccCccc--------------hHHHHHHHHHHhCCCCCCCCCcee
Q 001384 805 GKFSE-DRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG--------------EREFRAEMEVLSGNGFGWPHPNLV 868 (1088)
Q Consensus 805 ~~~~~-~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~~~~~l~h~niv 868 (1088)
++|.. .+.||+|+||+||+|.++ +++.||||++....... ...+.+|+++++. ++||||+
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv 83 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE----IKHENIM 83 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHh----CCCccee
Confidence 45653 577999999999999976 68999999987543221 1247789999886 6799999
Q ss_pred EEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEE
Q 001384 869 TLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKAL 948 (1088)
Q Consensus 869 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~k 948 (1088)
++++++..+...++||||++ |+|.+++.....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 84 GLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred eeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 99999999999999999997 59999998888899999999999999999999998 999999999999999999999
Q ss_pred EeecccceeecCCC-------------CcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCch
Q 001384 949 VTDFGLARVVSAGD-------------SHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEE 1014 (1088)
Q Consensus 949 l~Dfg~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~ 1014 (1088)
++|||.+....... ........++..|+|||.+.+. .++.++||||+|+++|||++|+.||.+.++
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999997654111 0111223467789999987653 478999999999999999999999987644
Q ss_pred h-HHHHHHhhhccCCCC--CCcc------ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1015 C-LVEWGRRVMGYGRHG--PGRA------VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1015 ~-~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ............... .... ...................++.+++.+|++.+|++||+++|++.
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1 111111111000000 0000 00000000000001122456889999999999999999999985
No 360
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=4.7e-31 Score=297.36 Aligned_cols=267 Identities=23% Similarity=0.296 Sum_probs=193.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC--
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS-- 878 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~-- 878 (1088)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+|++++++ ++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQL----LKHENVVNLIEICRTKATP 86 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHh----CCCCCccceEEEEeccccc
Confidence 357999999999999999999976 6899999998654222 23456778998886 67999999999987654
Q ss_pred ------eEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEee
Q 001384 879 ------EKILVYEYMEGGSLEDIISDRT-RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTD 951 (1088)
Q Consensus 879 ------~~~lv~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~D 951 (1088)
..++||||+.+ +|.+++.... .+++.+++.++.|++.||+|||++ +++|+||||+||+++.++.+||+|
T Consensus 87 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 87 YNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred ccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECc
Confidence 45999999965 8888876543 689999999999999999999999 999999999999999999999999
Q ss_pred cccceeecCCCCc---ccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhH-HHHHHhhhc-
Q 001384 952 FGLARVVSAGDSH---VSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECL-VEWGRRVMG- 1025 (1088)
Q Consensus 952 fg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~-~~~~~~~~~- 1025 (1088)
||.+..+...... ......++..|+|||...+. .++.++||||+|+++|||++|+.||.+..... .........
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T cd07865 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGS 242 (310)
T ss_pred CCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999866433221 12234567889999976553 47889999999999999999999998754311 111111100
Q ss_pred cCCC--CCC--ccccchh-hcCCCcc------ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1026 YGRH--GPG--RAVIPVV-LLGSGLA------EGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1026 ~~~~--~~~--~~~~~~~-~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.... ... ....... ....... ........+.+++.+|++.||++||+++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 000 0000000 0000000 00011245678999999999999999999975
No 361
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-34 Score=332.86 Aligned_cols=459 Identities=28% Similarity=0.352 Sum_probs=328.9
Q ss_pred eEEeccccccccccccccccCCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCc-ccCCCCCCCceeecccc
Q 001384 81 VNGLNLTDWNISGDIFNNFSALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGD-LNLSGLRSLEILDLSVN 159 (1088)
Q Consensus 81 v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~N 159 (1088)
++.|+++.|-+-...-+...+.-.|+.|||++|.+. ..|..+..+.+|+.|+++.|.|... .+..++++|++|.|.+|
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n 101 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNN 101 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccc
Confidence 677888777654422233334445999999999997 8888999999999999999998864 46788899999999999
Q ss_pred cccccccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCccccccccccCcccceecccCccccccccccc
Q 001384 160 RIHGEISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSV 239 (1088)
Q Consensus 160 ~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 239 (1088)
++. ..|.++. .+.+|++|++++|++. .+|..+..++.+..+..++|.... .
T Consensus 102 ~l~-~lP~~~~-~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~-~------------------------- 152 (1081)
T KOG0618|consen 102 RLQ-SLPASIS-ELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQ-R------------------------- 152 (1081)
T ss_pred hhh-cCchhHH-hhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhh-h-------------------------
Confidence 887 4555553 3478999999999988 456678899999999999982110 0
Q ss_pred ccCCCccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCc
Q 001384 240 FKENCSLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLE 319 (1088)
Q Consensus 240 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 319 (1088)
++.. .++.++|..|.+.+.++..+.+++. .|+|++|++. -..+..+.+|+.|....|++.... -..++|+
T Consensus 153 lg~~-~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~ 222 (1081)
T KOG0618|consen 153 LGQT-SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGPSLT 222 (1081)
T ss_pred hccc-cchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCcchh
Confidence 1111 2677788888888888888887776 7999999887 235677888999999999876541 2346899
Q ss_pred EEEcCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeecccc
Q 001384 320 VLDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHN 399 (1088)
Q Consensus 320 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 399 (1088)
.|+.++|.++...+. ..-.+|+++++++|+++ .+|.+++.+.+|+.|...+|
T Consensus 223 ~L~a~~n~l~~~~~~---------------------------p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N 274 (1081)
T KOG0618|consen 223 ALYADHNPLTTLDVH---------------------------PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHN 274 (1081)
T ss_pred eeeeccCcceeeccc---------------------------cccccceeeecchhhhh-cchHHHHhcccceEecccch
Confidence 999999988732211 12247889999999998 57788899999999999999
Q ss_pred ccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccc-cCCCC-CCeEEccCCcCccCC
Q 001384 400 RFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEI-GNCTS-LLWLNLSNNKLSGNI 477 (1088)
Q Consensus 400 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~-L~~L~L~~N~l~g~i 477 (1088)
+|+ .+|..+..+++|+.|++.+|.+. .+|+...++++|++|+|..|+|. .+|+.+ .-+.. |+.|+.+-|++. ..
T Consensus 275 ~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~l 350 (1081)
T KOG0618|consen 275 RLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TL 350 (1081)
T ss_pred hHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-cc
Confidence 997 88888888999999999999998 78888888999999999999997 566543 33322 677777888776 44
Q ss_pred Cchh-hccCCCCCccccccccCCcccccCCccccccccccCCCCCCCcceeeehhccccchhhhhcccCCcccccccCCC
Q 001384 478 PPEV-MTIGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPVCLPGL 556 (1088)
Q Consensus 478 p~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 556 (1088)
|..- .....++.+.+.+|++ .-.|+|.+
T Consensus 351 p~~~e~~~~~Lq~LylanN~L---------------------------------------------------td~c~p~l 379 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHL---------------------------------------------------TDSCFPVL 379 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcc---------------------------------------------------cccchhhh
Confidence 4110 0111111222222221 12222222
Q ss_pred cccceeeeceEEccCCccccccCc-ccccCCCccEEeccccccccCCCCcccCc-cceEEEccCCcccccCCccccCCcc
Q 001384 557 ASRTFQITGYLQLSGNQLSGELSP-DIGKLQNFSMVHLGFNQFDGKLPSQFDQL-PLIVLNLTRNNFSGEIPSEFGNIKC 634 (1088)
Q Consensus 557 ~~~~~~~l~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-~l~~l~l~~N~l~~~~p~~~~~l~~ 634 (1088)
. .+..|+.|+|++|+|. ++|. .+.+|..|++|+||+|+|+ .+|+.+..+ .|++|...+|++. .+| ++..+++
T Consensus 380 ~--~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~q 453 (1081)
T KOG0618|consen 380 V--NFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQ 453 (1081)
T ss_pred c--cccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCc
Confidence 2 2345667788888887 4554 5677778888888888887 677777766 5777777888887 777 7778888
Q ss_pred CcEEEccccccCC-cCCcccccccccceeeccCCCC
Q 001384 635 LQNLDLSYNNFSG-PFPASFNNLTELSKLNISYNPL 669 (1088)
Q Consensus 635 L~~L~l~~N~l~g-~~p~~~~~l~~L~~l~l~~N~l 669 (1088)
|+.+|||.|+|+- .+|...-. ++|++|||++|..
T Consensus 454 L~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 454 LKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTR 488 (1081)
T ss_pred ceEEecccchhhhhhhhhhCCC-cccceeeccCCcc
Confidence 8888888888753 34443322 7788888888864
No 362
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=4.8e-31 Score=293.04 Aligned_cols=262 Identities=25% Similarity=0.293 Sum_probs=199.7
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
|++.+.||+|++|.||+|... +++.+|+|++...... ....+..|++++++ ++|+||+++++++.++...++|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~v 76 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKE----LNHPNIIKLLDVFRHKGDLYLV 76 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHH----hcCCCcchHHHhhccCCCEEEE
Confidence 567789999999999999975 6889999998765322 34577889999886 6799999999999999999999
Q ss_pred EEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 884 YEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
|||+++ ++.+++... ..+++.++..++.|++.|++|||+. +|+|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 77 FEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred EeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 999976 888887663 5789999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCC--CCCCccc----
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGR--HGPGRAV---- 1035 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~---- 1035 (1088)
.......++..|+|||...+. .++.++||||+|+++|+|++|+.||...+. ..+.......... .......
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-IDQLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCchHhcccchhhh
Confidence 122334577889999987766 789999999999999999999999976543 1111111100000 0000000
Q ss_pred ------cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1036 ------IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1036 ------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+................++.+++.+|+++||.+||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000000012234568899999999999999999999975
No 363
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=2.5e-31 Score=302.99 Aligned_cols=267 Identities=25% Similarity=0.313 Sum_probs=197.9
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCC-CCCceeEEeeEEecC-
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGW-PHPNLVTLYGWCLDG- 877 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l-~h~niv~l~~~~~~~- 877 (1088)
..++|++.+.||+|+||.||+|.+. +++.+|+|++.... ......+..|+.++.+ + +||||+++++++...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~----l~~h~ni~~~~~~~~~~~ 80 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQE----LGDHPNIVKLLNVIKAEN 80 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHH----hcCCCCccceeeeeccCC
Confidence 3567899999999999999999976 68899999886532 2233457789998887 5 799999999988653
Q ss_pred -CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 -SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++||||+++ +|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 81 ~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 81 DKDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred CceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 468999999974 999998776 789999999999999999999998 99999999999999999999999999998
Q ss_pred eecCCCCc----ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC-
Q 001384 957 VVSAGDSH----VSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG- 1030 (1088)
Q Consensus 957 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 1030 (1088)
........ ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+..+.. ...+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~ 234 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEVIGPPSA 234 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCH
Confidence 76443221 2234568889999997644 567899999999999999999999997653311 1110000000000
Q ss_pred ---------CCccccchhhcCCC---ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1031 ---------PGRAVIPVVLLGSG---LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1031 ---------~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
......+....... .........++.+++.+|++.||++||++.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000000000 00011134678899999999999999999999864
No 364
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=2.2e-31 Score=302.74 Aligned_cols=269 Identities=25% Similarity=0.287 Sum_probs=205.6
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC----
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS---- 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~---- 878 (1088)
+|++.+.||+|++|.||+|+.. +++.||+|++.... ....+.+.+|+++++. ++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~----l~~~~i~~~~~~~~~~~~~~~ 76 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRH----LRHENIIGLLDILRPPSPEDF 76 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHh----cCCcchhhhhhhhcccCcccc
Confidence 5888999999999999999976 58999999987653 3344678889999987 67999999999988775
Q ss_pred -eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 879 -EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 879 -~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
..|+||||+++ +|.+++++..++++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+..
T Consensus 77 ~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 77 NDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred cceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 78999999975 8999998888899999999999999999999999 999999999999999999999999999987
Q ss_pred ecCCCC--cccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC--
Q 001384 958 VSAGDS--HVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG-- 1032 (1088)
Q Consensus 958 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1032 (1088)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||.+.... +..............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEED 230 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhH
Confidence 654321 122345678899999998877 8899999999999999999999999876431 111111100000000
Q ss_pred -----ccccchhhc--CCCc-----cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH--HHhhC
Q 001384 1033 -----RAVIPVVLL--GSGL-----AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM--LIKIL 1084 (1088)
Q Consensus 1033 -----~~~~~~~~~--~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~i~ 1084 (1088)
......... .... .........+.+++.+|++.+|++||++.++++. ++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 000000000 0000 0011234678899999999999999999999873 55543
No 365
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=8.2e-31 Score=295.90 Aligned_cols=261 Identities=21% Similarity=0.221 Sum_probs=190.2
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEec
Q 001384 810 DRIIGKGGFGTVYRGVLPDGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYM 887 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~ 887 (1088)
.+.+|.|+++.||++.. +++.||||++.... ....+.+..|++++++ ++||||+++++++.+....+++|||+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~----l~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQ----LQHPNILPYVTSFIVDSELYVVSPLM 81 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHh----cCCcchhhhhheeecCCeEEEEEecc
Confidence 34445555555555554 68999999987652 2334578899999987 67999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc-
Q 001384 888 EGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH- 964 (1088)
Q Consensus 888 ~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~- 964 (1088)
++|+|.++++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+.........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence 999999999763 4589999999999999999999999 9999999999999999999999999988765432211
Q ss_pred -----ccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCC--CCC----
Q 001384 965 -----VSTTIAGTVGYVAPEYGQT--WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGR--HGP---- 1031 (1088)
Q Consensus 965 -----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~---- 1031 (1088)
......++..|+|||++.. ..++.++||||+||++|||++|+.||................... ...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence 1123456778999998765 358899999999999999999999998654322111111000000 000
Q ss_pred ----Cc-----cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 ----GR-----AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ----~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.. ....................++.+++.+||+.||++||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00 000000000011112233457889999999999999999999975
No 366
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=4.7e-31 Score=293.16 Aligned_cols=262 Identities=25% Similarity=0.315 Sum_probs=195.2
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCC-CCceeEEeeEEecCCeEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWP-HPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~-h~niv~l~~~~~~~~~~~lv 883 (1088)
|++.+.||+|++|+||+|+.. +++.||+|++...... ......+|+..+.+ ++ |||++++++++.+++..++|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~----~~~h~~i~~~~~~~~~~~~~~lv 76 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRK----LNEHPNIVKLKEVFRENDELYFV 76 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHh----ccCCCCchhHHHHhhcCCcEEEE
Confidence 567889999999999999976 5788999998765322 22344567887775 56 99999999999999999999
Q ss_pred EEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 884 YEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||+ +|+|.+++.... .+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 9999 779999987765 789999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCcccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHh-hhccCC----------C
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRR-VMGYGR----------H 1029 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~-~~~~~~----------~ 1029 (1088)
. ......++..|+|||++. ...++.++||||||++++||++|+.||.........+... ...... .
T Consensus 153 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 153 P--PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred C--CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 2 223345788999999764 4567899999999999999999999997654311111100 000000 0
Q ss_pred CCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 GPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+................++.+++.+|++.||++||+++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000000000001112467889999999999999999999875
No 367
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-32 Score=305.38 Aligned_cols=270 Identities=30% Similarity=0.395 Sum_probs=205.4
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccC-ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC-----
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG-LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS----- 878 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~----- 878 (1088)
.|...+.||+|+||.||+|+.+ +|+.||||.+.... ....+.+..|++++++ ++|+|||++++.-.+..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkK----Lnh~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKK----LNHPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHH----cCchhhhhhcccCCccccCccc
Confidence 3455688999999999999955 79999999998754 3445678899999997 67999999999765443
Q ss_pred -eEEEEEEecCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc--CCC--CEEEe
Q 001384 879 -EKILVYEYMEGGSLEDIISDR---TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD--KEG--KALVT 950 (1088)
Q Consensus 879 -~~~lv~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~--~~~--~~kl~ 950 (1088)
...+|||||.||+|+..+++. ..+++.+.+.+..+++.||.|||++ +||||||||.||++- ++| ..||+
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeee
Confidence 568999999999999999763 4699999999999999999999998 999999999999984 334 47999
Q ss_pred ecccceeecCCCCcccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh----HHHHHHhhhc
Q 001384 951 DFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEEC----LVEWGRRVMG 1025 (1088)
Q Consensus 951 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~----~~~~~~~~~~ 1025 (1088)
|||.|+.+..+ ......+||..|.+||.+. ...|+..+|.|||||++|+++||..||...... -..|.....+
T Consensus 167 DfG~Arel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkk 244 (732)
T KOG4250|consen 167 DFGAARELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKK 244 (732)
T ss_pred cccccccCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccC
Confidence 99999987643 3677889999999999888 489999999999999999999999999765331 1222221110
Q ss_pred cC-------CCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCC--CHHHHHHHHHhhCC
Q 001384 1026 YG-------RHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARP--NVKEVLAMLIKILP 1085 (1088)
Q Consensus 1026 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~eil~~L~~i~~ 1085 (1088)
-. ....+.-.....+ ...-.........+..++..++..+|++|- .+.+....+..|+.
T Consensus 245 p~~v~i~~~~~eNgpv~~s~~l-P~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 245 PSGVAIGAQEEENGPVEWSSTL-PQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred CCceeEeeecccCCceeeeccC-CCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 00 0000000000000 001112344556777888889999999999 77777777777653
No 368
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=299.63 Aligned_cols=240 Identities=27% Similarity=0.334 Sum_probs=195.9
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
++.|.....+|.|+|+.|-.+.+. +++..+||++.+.. .+..+|+.++...+ .|||++++.+++.+..+.|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~---~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVR---DHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhc---CCCcceeecceecCCceeee
Confidence 677888889999999999999965 68899999998762 22344555555433 79999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE-cCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLL-DKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll-~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|||.+.|+-+.+.+....... .++..|+.+|+.|+.|||++ |||||||||+|||+ ++.++++|+|||.++.....
T Consensus 394 v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999999998888876665555 88889999999999999999 99999999999999 59999999999999876543
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
....+-|..|.|||+.....|++++||||+|++||+|++|+.||...... .+...++. .+.
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~-~~~------------- 530 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQ-MPK------------- 530 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhc-CCc-------------
Confidence 33446788999999999999999999999999999999999999876543 12111111 111
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. .........+++.+|++.||.+||++.++..
T Consensus 531 --~---s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 531 --F---SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --c---ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 0 1233456778888999999999999999864
No 369
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=1.3e-30 Score=295.85 Aligned_cols=261 Identities=20% Similarity=0.279 Sum_probs=189.4
Q ss_pred ceeccc--CceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 811 RIIGKG--GFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 811 ~~LG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
..||+| +||+||+|++. +|+.||+|++...... ..+.+.+|+.++.. ++||||+++++++..++..++|||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~----l~h~niv~~~~~~~~~~~~~~v~e 79 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHF----FRHPNIMTSWTVFTTGSWLWVISP 79 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHh----CCCCCcceEeeeEecCCceEEEEe
Confidence 456666 99999999975 7899999998754322 23567788888775 689999999999999999999999
Q ss_pred ecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 886 YMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
|+.++++.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~ 156 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ 156 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence 99999999998764 3489999999999999999999998 999999999999999999999999986543321111
Q ss_pred cc------cccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC------
Q 001384 964 HV------STTIAGTVGYVAPEYGQT--WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH------ 1029 (1088)
Q Consensus 964 ~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 1029 (1088)
.. .....++..|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd08226 157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTF 236 (328)
T ss_pred cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccccc
Confidence 00 111234567999998865 3578999999999999999999999986533111110000000000
Q ss_pred ------------CCCccccchh--------h--cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 ------------GPGRAVIPVV--------L--LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 ------------~~~~~~~~~~--------~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.......+.. . .....+........+.+++.+|++.||++||+++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0000000000 0 00011112345678899999999999999999999974
No 370
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=7.8e-32 Score=273.29 Aligned_cols=201 Identities=27% Similarity=0.390 Sum_probs=169.3
Q ss_pred CCCCccceecccCceEEEEEEeCC-----CcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec-
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD-----GREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD- 876 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~- 876 (1088)
..|+....||+|.||.||+|..++ .+.+|+|+++.... .-....-+|+..++. ++|||++.+..++.+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~RE----l~h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRE----LKHPNVISLVKVFLSH 99 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHH----hcCCcchhHHHHHhcc
Confidence 468899999999999999997432 33799999986522 223456789999887 689999999999987
Q ss_pred CCeEEEEEEecCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC----CCE
Q 001384 877 GSEKILVYEYMEGGSLEDIISDR-----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE----GKA 947 (1088)
Q Consensus 877 ~~~~~lv~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~----~~~ 947 (1088)
+...++++||.+. +|...|+-+ ..++...+..|..||+.|+.|||+. =|+||||||.||||..+ |.|
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCee
Confidence 8889999999988 999988643 3589999999999999999999999 59999999999999977 899
Q ss_pred EEeecccceeecCCCCc--ccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCc
Q 001384 948 LVTDFGLARVVSAGDSH--VSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGE 1013 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~ 1013 (1088)
||+|||+++.+...-.. ....++-|..|.|||.+. ...|+.+.||||.|||+.||+|-++.|.+.+
T Consensus 176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence 99999999988654322 234577899999999655 5689999999999999999999999887753
No 371
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-33 Score=275.43 Aligned_cols=249 Identities=27% Similarity=0.412 Sum_probs=194.9
Q ss_pred cceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEec
Q 001384 810 DRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYM 887 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~ 887 (1088)
...||.|+||+|+|-.++ .|+..|||+++.... ..++++..|.+...+. -+.||||++||.+..++..|+-||.|
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks---~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS---SNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh---cCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 467999999999999976 799999999997755 3456788888876653 48999999999999999999999999
Q ss_pred CCCCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 888 EGGSLEDIIS-----DRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 888 ~~gsL~~~l~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
+- ++..+-+ ....+++.-+-.|+...+.||+||-+.. .|||||+||+|||++..|.+|++|||.+-.+. +
T Consensus 146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv--~ 220 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV--D 220 (361)
T ss_pred hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH--H
Confidence 54 7665432 3456999999999999999999999875 89999999999999999999999999986553 2
Q ss_pred CcccccccccccccCccccCCC--CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTW--QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
+...+.-+|...|||||.+... .|+.++||||+|+++||+.||..|+.+......+...... +. . +.+
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gd---p-----p~l 290 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GD---P-----PIL 290 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CC---C-----Cee
Confidence 3333445688899999987643 5899999999999999999999999887553333222221 11 0 011
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... .........+.++|.-|+.+|-..||.+.++.+
T Consensus 291 ~~~--~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 291 LFD--KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cCc--ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 000 011234567888999999999999999999865
No 372
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=7.9e-31 Score=299.16 Aligned_cols=266 Identities=21% Similarity=0.289 Sum_probs=195.6
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC---
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--- 877 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--- 877 (1088)
..+|...+.||+|+||.||+|++. +|+.||||++.+... .....+.+|+++++. +.||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~----l~h~niv~~~~~~~~~~~~ 89 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKH----MQHENVIGLLDVFTSAVSG 89 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHh----cCCCCccchhheecccccC
Confidence 478999999999999999999975 689999999875421 223467889999986 6799999999998754
Q ss_pred ---CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccc
Q 001384 878 ---SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGL 954 (1088)
Q Consensus 878 ---~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~ 954 (1088)
...++|+||+.. +|.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+
T Consensus 90 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 90 DEFQDFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred CCCceEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 346899999965 7877653 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC---
Q 001384 955 ARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG--- 1030 (1088)
Q Consensus 955 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 1030 (1088)
++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.... ..+.......+...
T Consensus 164 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 164 ARHADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEF 238 (342)
T ss_pred CcCCCC----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHH
Confidence 875432 1223467889999998765 46889999999999999999999999875431 11111110000000
Q ss_pred -------CCccc---cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH--HHHhhC
Q 001384 1031 -------PGRAV---IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA--MLIKIL 1084 (1088)
Q Consensus 1031 -------~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~--~L~~i~ 1084 (1088)
..... .+...........+.....+.+++.+|++.||++||+++|++. .++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00000 0000000000000122356789999999999999999999984 466553
No 373
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=3.2e-30 Score=290.46 Aligned_cols=242 Identities=29% Similarity=0.406 Sum_probs=191.6
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
|...+.||+|+||+||+|++. +++.||+|++...... ....+..|+++++. ++|||++++++++.+....|+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQ----LKHPNTIEYKGCYLKEHTAWL 98 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHh----CCCCCCccEEEEEEeCCEEEE
Confidence 566678999999999999975 6889999998754322 22467789998886 679999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
||||+. |++.+++.. ..++++.+++.++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++.....
T Consensus 99 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 99 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP- 173 (313)
T ss_pred EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC-
Confidence 999996 488887754 45689999999999999999999999 999999999999999999999999998864321
Q ss_pred CCcccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccch
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQ---TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPV 1038 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1088)
.....++..|+|||++. ...++.++||||||+++|+|++|..||......... ........ +.
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~--~~~~~~~~--------~~ 239 (313)
T cd06633 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIAQNDS--------PT 239 (313)
T ss_pred ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHhcCC--------CC
Confidence 22356788999999874 456889999999999999999999999765431111 11110000 00
Q ss_pred hhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1039 VLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1039 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. ........+.+++.+|++.+|.+||++.|+++
T Consensus 240 ~-------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 240 L-------QSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred C-------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 01122345788999999999999999999985
No 374
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=6.9e-31 Score=287.91 Aligned_cols=246 Identities=25% Similarity=0.367 Sum_probs=193.7
Q ss_pred CCCccceecccCceEEEEEEeCC-CcEEEEEEccccC-----ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPD-GREVAVKKLQREG-----LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
+|.+.+.||+|+||.||+|++.. +..+++|.++... .....++..|+.+++. ++||||+++++++.+...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~ 76 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSK----LDHPAIVKFHASFLERDA 76 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHh----CCCCcHHHHHHHHhcCCc
Confidence 58888999999999999999753 4456666655321 1223356678888876 679999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 880 KILVYEYMEGGSLEDIISD----RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 880 ~~lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
.++||||+++++|.+++.. ...+++.+++.++.|++.|++|||+. +++|+||+|+||+++. +.++++|||.+
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~ 152 (260)
T cd08222 77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVS 152 (260)
T ss_pred eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCce
Confidence 9999999999999998864 34689999999999999999999998 9999999999999975 66999999998
Q ss_pred eeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccc
Q 001384 956 RVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 956 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
....... .......++..|+|||......++.++||||+|+++|+|++|..||..... .........
T Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~~~~~---------- 219 (260)
T cd08222 153 RLLMGSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVLRIVE---------- 219 (260)
T ss_pred eecCCCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHc----------
Confidence 7764322 223345678899999998888889999999999999999999999975432 111111110
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+.....+.....++.+++.+|++.+|++||++.|+++
T Consensus 220 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 220 ------GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ------CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0111113344567889999999999999999999975
No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.5e-30 Score=292.52 Aligned_cols=245 Identities=28% Similarity=0.390 Sum_probs=193.5
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
.|...+.||+|+||.||+|++. +++.||+|.+..... ....++.+|+++++. ++|+|++++++++......+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK----LRHPNTIQYRGCYLREHTAW 91 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHh----CCCCCcccEEEEEEcCCeeE
Confidence 4666788999999999999975 678899999864322 223467789998886 67999999999999999999
Q ss_pred EEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 882 LVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
+||||+. |++.+++.. ..++++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 92 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 92 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 9999996 588887754 45689999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCcccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQ---TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
. ....++..|+|||.+. ...++.++|||||||++|+|++|+.||.......... ....... +
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~--------~ 232 (308)
T cd06634 168 A-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQNES--------P 232 (308)
T ss_pred c-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH--HHhhcCC--------C
Confidence 2 2345788999999864 4567889999999999999999999987643311111 1110000 0
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
..........+.+++.+|++.+|++||++.++++.-
T Consensus 233 -------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 233 -------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred -------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 001123445688899999999999999999998753
No 376
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=8.4e-31 Score=295.43 Aligned_cols=267 Identities=25% Similarity=0.330 Sum_probs=193.4
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC--
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS-- 878 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~-- 878 (1088)
.++|++.+.||+|+||.||+|+++ +++.+|+|++...... ....+.+|+++++. ++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~ 82 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKK----LKHPNVVPLIDMAVERPDK 82 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHh----cCCCCccchhhheeccccc
Confidence 468999999999999999999976 6889999998654322 23456789999886 67999999999875433
Q ss_pred ------eEEEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEee
Q 001384 879 ------EKILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTD 951 (1088)
Q Consensus 879 ------~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~D 951 (1088)
..++||||+++ ++...+.. ...+++.++..++.|+++||+|||++ +|+||||||+||++++++.++++|
T Consensus 83 ~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 83 SKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred ccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 46999999975 77777654 44799999999999999999999999 999999999999999999999999
Q ss_pred cccceeecCCCCc----------ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhH-HHH
Q 001384 952 FGLARVVSAGDSH----------VSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECL-VEW 1019 (1088)
Q Consensus 952 fg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~-~~~ 1019 (1088)
||+++........ ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+..... .+-
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~ 238 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL 238 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999765432211 1123456788999997654 468899999999999999999999998654411 000
Q ss_pred HHhhhcc--CCCCCCccccch----hhcCCCccc----cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1020 GRRVMGY--GRHGPGRAVIPV----VLLGSGLAE----GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1020 ~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....... ..........+. ......... .......+.+++.+|++.||++||++.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000 000000000000 000000000 0112256889999999999999999999874
No 377
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=280.74 Aligned_cols=274 Identities=22% Similarity=0.244 Sum_probs=204.9
Q ss_pred cCHHHHHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCC-CC-CceeEEe
Q 001384 795 FTYSDILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGW-PH-PNLVTLY 871 (1088)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l-~h-~niv~l~ 871 (1088)
+-+......+++|.+...+|+|.||.|-++.++ .+..||||+++.- ....+..+-|++++.++.... .. --+|.+.
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 334434445889999999999999999999976 4689999999864 233455677888888764221 11 1378899
Q ss_pred eEEecCCeEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC------
Q 001384 872 GWCLDGSEKILVYEYMEGGSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK------ 943 (1088)
Q Consensus 872 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~------ 943 (1088)
+||...++.|+|+|.+ |-+++|++..+. +++...++.|+.|++++++|||+. +++|.||||+||++.+
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 9999999999999999 559999998765 688999999999999999999999 9999999999999942
Q ss_pred --------------CCCEEEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCC
Q 001384 944 --------------EGKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAL 1009 (1088)
Q Consensus 944 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~ 1009 (1088)
+..+|++|||.|+.-.. .....+.|..|.|||++.+-.++.++||||+||||+|+.||...|
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LF 309 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHE----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLF 309 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceecc----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceec
Confidence 33689999999986432 235677899999999999999999999999999999999999999
Q ss_pred CCCch--hHHHHHHhhh-ccCCCCCCcc-----------c---------cchhhcCCC-----ccccHHHHHHHHHHHhh
Q 001384 1010 EGGEE--CLVEWGRRVM-GYGRHGPGRA-----------V---------IPVVLLGSG-----LAEGAEEMSELLRIGVR 1061 (1088)
Q Consensus 1010 ~~~~~--~~~~~~~~~~-~~~~~~~~~~-----------~---------~~~~~~~~~-----~~~~~~~~~~l~~li~~ 1061 (1088)
+..+. .+ .-..++. +.+.....+. . .......+. ......+..++++++.+
T Consensus 310 qtHen~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~ 388 (415)
T KOG0671|consen 310 QTHENLEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR 388 (415)
T ss_pred ccCCcHHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence 87652 11 1111111 0000000000 0 000000000 01234556689999999
Q ss_pred hcccCCCCCCCHHHHHH
Q 001384 1062 CTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1062 cl~~dP~~RPs~~eil~ 1078 (1088)
|+..||.+|+|+.|++.
T Consensus 389 mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 389 MLEFDPARRITLREALS 405 (415)
T ss_pred HHccCccccccHHHHhc
Confidence 99999999999999975
No 378
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-31 Score=276.48 Aligned_cols=263 Identities=25% Similarity=0.366 Sum_probs=214.6
Q ss_pred CHHHHHHHcCCCCccceecccCceEEEEEEeCC------CcEEEEEEccccCccch-HHHHHHHHHHhCCCCCCCCCcee
Q 001384 796 TYSDILKATGKFSEDRIIGKGGFGTVYRGVLPD------GREVAVKKLQREGLEGE-REFRAEMEVLSGNGFGWPHPNLV 868 (1088)
Q Consensus 796 ~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-~~~~~E~~~l~~~~~~l~h~niv 868 (1088)
...++.....+++...++-+|.||.||.|.+++ .+.|-||.++....+-+ ..+..|.-.+.. ..|||+.
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~----~sH~nll 350 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYG----ASHPNLL 350 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhc----CcCCCcc
Confidence 345566666788888999999999999998753 34577888876543333 346677666665 5799999
Q ss_pred EEeeEEecC-CeEEEEEEecCCCCHHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCE
Q 001384 869 TLYGWCLDG-SEKILVYEYMEGGSLEDIISDR--------TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNV 939 (1088)
Q Consensus 869 ~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~--------~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NI 939 (1088)
++.+++.++ ...+.++.++.-|+|..++... ..++..+...++.|++.|++|||+. +|||.||.++|+
T Consensus 351 ~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNC 427 (563)
T KOG1024|consen 351 SVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNC 427 (563)
T ss_pred ceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcc
Confidence 999998765 4567889999999999999721 2378889999999999999999999 999999999999
Q ss_pred EEcCCCCEEEeecccceeecCCCCcccc-cccccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHH
Q 001384 940 LLDKEGKALVTDFGLARVVSAGDSHVST-TIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT-GRRALEGGEECLV 1017 (1088)
Q Consensus 940 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~ 1017 (1088)
+||+.-++|++|=.+++.+.+.+.+-.. .-..+..||+||.+....|+.++|||||||++|||+| |+.|+..-++..+
T Consensus 428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm 507 (563)
T KOG1024|consen 428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM 507 (563)
T ss_pred eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence 9999999999999999988877766432 3345779999999999999999999999999999998 8889876554222
Q ss_pred HHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1018 EWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
+ .-...|.+...|-.++.+++.++.-||..+|++||++++++.-|.+.
T Consensus 508 ~------------------~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 508 E------------------HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred H------------------HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1 12234556667888999999999999999999999999999888765
No 379
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=7.4e-31 Score=299.42 Aligned_cols=266 Identities=24% Similarity=0.280 Sum_probs=194.7
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC-----
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG----- 877 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~----- 877 (1088)
..+|++.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++ ++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~----l~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRR----LDHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHh----cCCCcchhhHhhhcccccccc
Confidence 368999999999999999999975 688999999877655556778899999986 6799999999876543
Q ss_pred ---------CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc-CCCCE
Q 001384 878 ---------SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD-KEGKA 947 (1088)
Q Consensus 878 ---------~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~-~~~~~ 947 (1088)
...++||||++ ++|.+++.. .++++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceE
Confidence 35789999997 499988864 4689999999999999999999999 999999999999998 45678
Q ss_pred EEeecccceeecCCCCcc--cccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHH-hh
Q 001384 948 LVTDFGLARVVSAGDSHV--STTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGR-RV 1023 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~-~~ 1023 (1088)
|++|||.++......... .....++..|+|||.+. +..++.++|||||||++|+|++|+.||.+..+....-.. ..
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999998654321111 12235788999999754 456888999999999999999999999865431110000 00
Q ss_pred hccCCCCC---Cccccchhhc--CCCccc-----cHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1024 MGYGRHGP---GRAVIPVVLL--GSGLAE-----GAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1024 ~~~~~~~~---~~~~~~~~~~--~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
........ .....+.... ...... ......++.+++.+|++.||++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000000 0000000000 000000 1123356888999999999999999999983
No 380
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.4e-30 Score=289.19 Aligned_cols=263 Identities=25% Similarity=0.308 Sum_probs=198.4
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
|+..+.||+|++|.||+|+.. +++.||+|++.... ....+.+..|++++++ ++|+|++++++++.+....++|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~----~~~~~i~~~~~~~~~~~~~~~v 76 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKE----LKHPNIVKLLDVIHTERKLYLV 76 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHh----cCCCCHHHHHhhhhcCCceEEE
Confidence 566788999999999999976 58999999998753 2234567889999886 5799999999999999999999
Q ss_pred EEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 884 YEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
|||++ ++|.+++... ..+++.++..++.|++.|++|||++ +|+||||+|+||++++++.++|+|||.++......
T Consensus 77 ~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 77 FEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred ecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 99998 4999999876 5799999999999999999999999 99999999999999999999999999987654322
Q ss_pred CcccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchh-HHHHHHhhhccCC---------CCC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEEC-LVEWGRRVMGYGR---------HGP 1031 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~---------~~~ 1031 (1088)
. ......++..|+|||.+... .++.++||||+|+++|||++|+.||...... ............. ...
T Consensus 153 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 153 R-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred c-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 1 22233457789999987666 8899999999999999999999999765321 1011000000000 000
Q ss_pred CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.....+.................+.+++.+|++.||++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00001100000000001122467899999999999999999999975
No 381
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.5e-30 Score=295.74 Aligned_cols=266 Identities=24% Similarity=0.246 Sum_probs=193.2
Q ss_pred CCCccceecccCceEEEEEEeC-C--CcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC---
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-D--GREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG--- 877 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~--- 877 (1088)
+|++.+.||+|+||.||+|+.. + +..||+|++..... ...+.+.+|++++.++. .||||+++++++...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~---~h~~iv~~~~~~~~~~~~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR---GHKNITCLYDMDIVFPGN 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc---CCCChheeeeeeeecccc
Confidence 4778899999999999999975 4 77899999875321 22456778999888632 699999999875432
Q ss_pred -CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 878 -SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 878 -~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
...++++||++ ++|.+++.....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 78 ~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 78 FNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred CCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 45788999986 59999998888899999999999999999999999 99999999999999999999999999998
Q ss_pred eecCCCCc---ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccCCCCC
Q 001384 957 VVSAGDSH---VSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 957 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~ 1031 (1088)
........ ......|+..|+|||...+ ..++.++||||+|+++|+|++|+.||..... .................
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 76432211 1223568899999997655 5689999999999999999999999976542 11111111000000000
Q ss_pred Cccc-------cchhhcCCC----ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1032 GRAV-------IPVVLLGSG----LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1032 ~~~~-------~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.... ......... ..........+.+++.+|++.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 000000000 0000112356889999999999999999999864
No 382
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.4e-30 Score=294.88 Aligned_cols=267 Identities=21% Similarity=0.280 Sum_probs=197.7
Q ss_pred HHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec
Q 001384 800 ILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD 876 (1088)
Q Consensus 800 ~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~ 876 (1088)
+...+++|++.+.||+|+||.||+|... +++.||+|++.+.. ....+.+..|+++++. ++|||++++++++..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~----l~hpniv~~~~~~~~ 80 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKH----LRHENIISLSDIFIS 80 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHh----cCCCCeeeEeeeEec
Confidence 3456788999999999999999999965 78999999886532 2234567889999986 679999999998875
Q ss_pred -CCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 877 -GSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 877 -~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
....++||||+ +++|.++++. .++++..+..++.|++.||+|||+. +|+||||+|+||++++++.++++|||.+
T Consensus 81 ~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 81 PLEDIYFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred CCCcEEEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 56788999999 5599988864 4578899999999999999999999 9999999999999999999999999998
Q ss_pred eeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhhccC-----
Q 001384 956 RVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVMGYG----- 1027 (1088)
Q Consensus 956 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~----- 1027 (1088)
...... .....++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||...... ...+........
T Consensus 156 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 156 RIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred cccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 754321 123456788999998765 57899999999999999999999999765431 111111000000
Q ss_pred --CCCCCccccchhhcCCCcc---ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1028 --RHGPGRAVIPVVLLGSGLA---EGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1028 --~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
..................+ ........+.+++.+|++.+|++||++.|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000000000 001124678899999999999999999998754
No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=287.73 Aligned_cols=242 Identities=28% Similarity=0.393 Sum_probs=198.6
Q ss_pred cceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEe
Q 001384 810 DRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEY 886 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~ 886 (1088)
.++||+|.||+||-|+++ +|+.||||++.+.. ...+.++++|+.+++. ++||.||.+-..|+..+..++|||.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~----l~HPGiV~le~M~ET~ervFVVMEK 644 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQN----LHHPGIVNLECMFETPERVFVVMEK 644 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHh----cCCCCeeEEEEeecCCceEEEEehh
Confidence 478999999999999975 79999999998754 3345679999999997 7899999999999999999999999
Q ss_pred cCCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC---CCEEEeecccceeecCCC
Q 001384 887 MEGGSLEDIIS-DRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE---GKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 887 ~~~gsL~~~l~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~---~~~kl~Dfg~a~~~~~~~ 962 (1088)
+.|.-|.-++. +.++++++....++.||+.||.|||.+ +|||+||||+|||+.+. ..+||+|||+|+....
T Consensus 645 l~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-- 719 (888)
T KOG4236|consen 645 LHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-- 719 (888)
T ss_pred hcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch--
Confidence 97644554443 467899999999999999999999999 99999999999999754 3799999999998863
Q ss_pred CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcC
Q 001384 963 SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLG 1042 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1088)
......++||+.|.|||++..+.|...-|+||.|||+|--++|..||..+++.-.+...... +.
T Consensus 720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF----------------My 783 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF----------------MY 783 (888)
T ss_pred hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc----------------cc
Confidence 34456789999999999999999999999999999999999999999887653222211111 00
Q ss_pred CCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHH
Q 001384 1043 SGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVL 1077 (1088)
Q Consensus 1043 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1077 (1088)
.. ....+.....+++|...++..-++|.+.+..+
T Consensus 784 Pp-~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 784 PP-NPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CC-CchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 00 11233445778888899999999999887654
No 384
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.4e-30 Score=297.24 Aligned_cols=269 Identities=23% Similarity=0.287 Sum_probs=197.3
Q ss_pred HHHHHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeE
Q 001384 797 YSDILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGW 873 (1088)
Q Consensus 797 ~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~ 873 (1088)
..++...+++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++.+ ++||||++++++
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~----l~h~~iv~~~~~ 84 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH----MKHENVIGLLDV 84 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHH----cCCCcccceeee
Confidence 3456677899999999999999999999864 68899999997542 2234567789998886 679999999998
Q ss_pred EecC------CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCE
Q 001384 874 CLDG------SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKA 947 (1088)
Q Consensus 874 ~~~~------~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~ 947 (1088)
+... ...+++++++ +++|.++++.. .+++..++.++.|+++|++|||+. +|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 85 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred eeecccccccccEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 7643 3467888887 77999888654 589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhH-HHHHHhhhc
Q 001384 948 LVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECL-VEWGRRVMG 1025 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~-~~~~~~~~~ 1025 (1088)
||+|||+++.... ......++..|+|||...+ ..++.++||||+||++|||++|+.||....... ..-......
T Consensus 160 kl~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 160 KILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred EEecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999876432 1233467889999998755 568899999999999999999999997643311 000000000
Q ss_pred cCCCCCC--------ccc---cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1026 YGRHGPG--------RAV---IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1026 ~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....... ... .+................++.+++.+|++.||.+||++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0000000 000 0000000000000012346789999999999999999999875
No 385
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.8e-30 Score=281.22 Aligned_cols=236 Identities=29% Similarity=0.341 Sum_probs=194.8
Q ss_pred ecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 813 IGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
||+|+||.||++... +++.+|+|++...... ....+..|++++++ +.|||++++++.+..+...++||||++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSR----INHPFIVKLHYAFQTEEKLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHH----cCCCcHHHHHHHeecCCeeEEEEecCC
Confidence 699999999999976 5899999998765432 33468889998886 679999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccc
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
+++|.+++.....+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++++|||.+....... .....
T Consensus 77 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 77 GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 999999998887899999999999999999999998 99999999999999999999999999998764332 12334
Q ss_pred ccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCcccc
Q 001384 969 IAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEG 1048 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1088)
..++..|+|||...+...+.++|+||||+++|++++|+.||...+. .+....... . ....+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~-~----------------~~~~~ 213 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKILK-D----------------PLRFP 213 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhc-C----------------CCCCC
Confidence 5678899999999888889999999999999999999999976543 111122211 0 00112
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCHHH
Q 001384 1049 AEEMSELLRIGVRCTAEAPNARPNVKE 1075 (1088)
Q Consensus 1049 ~~~~~~l~~li~~cl~~dP~~RPs~~e 1075 (1088)
......+.+++.+|+..||++||++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 222467888999999999999999954
No 386
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=5.3e-30 Score=314.53 Aligned_cols=145 Identities=30% Similarity=0.472 Sum_probs=131.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
++|++.+.||+|+||.||+|.+. +++.||||+++...... ...+..|+.++.. ++||||+++++++......
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~----l~hp~Iv~~~~~~~~~~~~ 79 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALAL----SKSPFIVHLYYSLQSANNV 79 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHh----cCCCCcCeEEEEEEECCEE
Confidence 57899999999999999999976 68999999997643222 2567788888875 6799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
|+||||+.+++|.++++....+++..++.|+.||+.||+|||.. +||||||||+|||++.++.+||+|||+++
T Consensus 80 ~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 80 YLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999999998888899999999999999999999998 99999999999999999999999999875
No 387
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=281.09 Aligned_cols=256 Identities=26% Similarity=0.382 Sum_probs=196.3
Q ss_pred HHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc---cc----hHHHHHHHHHHhCCCCCCCCCceeEEeeE
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL---EG----EREFRAEMEVLSGNGFGWPHPNLVTLYGW 873 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~----~~~~~~E~~~l~~~~~~l~h~niv~l~~~ 873 (1088)
...++|-+..+||+|+|+.||+|.+- ..+.||||+-..... +. .+...+|.++.+. +.||.||++|++
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKe----LDHpRIVKlYDy 535 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKE----LDHPRIVKLYDY 535 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhc----cCcceeeeeeee
Confidence 34567888899999999999999964 678899998653321 11 1345567777765 789999999999
Q ss_pred Eec-CCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc---CCCCEEE
Q 001384 874 CLD-GSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD---KEGKALV 949 (1088)
Q Consensus 874 ~~~-~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~---~~~~~kl 949 (1088)
+.- .+.+|-|+|||+|.+|+-|++.+.-+++.+++.|++||+.||.||.+. .++|||-||||.|||+. .-|.+||
T Consensus 536 fslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 536 FSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred eeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEe
Confidence 874 567889999999999999999999999999999999999999999997 57999999999999995 4578999
Q ss_pred eecccceeecCCCCc------ccccccccccccCccccC----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCch--hHH
Q 001384 950 TDFGLARVVSAGDSH------VSTTIAGTVGYVAPEYGQ----TWQATTKGDVYSFGVLAMELATGRRALEGGEE--CLV 1017 (1088)
Q Consensus 950 ~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~--~~~ 1017 (1088)
+|||+++.+...... .+....||++|++||.+- ....+.|+||||.|||+|.++.|+.||...-. .+.
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdIL 694 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDIL 694 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHH
Confidence 999999988653322 234578999999999533 23568899999999999999999999986532 222
Q ss_pred HHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHH
Q 001384 1018 EWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVL 1077 (1088)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1077 (1088)
+. ..++ ..-+..+.. -+....+...+|++|++..-++|....++.
T Consensus 695 qe-NTIl---------kAtEVqFP~-----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 695 QE-NTIL---------KATEVQFPP-----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hh-hchh---------cceeccCCC-----CCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 22 1111 111111101 122334567788899999999998877664
No 388
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=270.68 Aligned_cols=244 Identities=25% Similarity=0.331 Sum_probs=198.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchH---HHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGER---EFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.+|.+.++||+|+|++|..++++ +.+.+|+|+++++-...++ =++.|-.+..+.. +||.+|.+..+|..+...
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as---n~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS---NNPFLVGLHSCFQTESRL 326 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc---CCCeEEehhhhhcccceE
Confidence 46889999999999999999976 5778999999876433322 2455666665543 899999999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++|.||++||+|--.+++.++++++.++.+...|+.||.|||++ |||+||+|..||++|..|++|++|+|+++.--
T Consensus 327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l- 402 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL- 402 (593)
T ss_pred EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC-
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999997532
Q ss_pred CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCC-----chhHHHHHHhhhccCCCCCCccc
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGG-----EECLVEWGRRVMGYGRHGPGRAV 1035 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1088)
.+...+.+++||+.|.|||++.+..|.+.+|+|++||+++||+.|+.||+-- +.+..++..+..-..+
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq------- 475 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ------- 475 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc-------
Confidence 2334567799999999999999999999999999999999999999999732 2234444444331111
Q ss_pred cchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCC
Q 001384 1036 IPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARP 1071 (1088)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1071 (1088)
...|.....+...+++.-+++||.+|.
T Consensus 476 ---------iriprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 ---------IRIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---------ccccceeehhhHHHHHHhhcCCcHHhc
Confidence 011222234455677789999999986
No 389
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.6e-30 Score=280.50 Aligned_cols=222 Identities=24% Similarity=0.240 Sum_probs=177.3
Q ss_pred cCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCCCCHHH
Q 001384 816 GGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEGGSLED 894 (1088)
Q Consensus 816 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 894 (1088)
|.+|.||+|+++ +++.||+|++.... .+..|...+.. ..|||++++++++.+....++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIP----HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHh----cCCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 899999999976 68899999997652 12233333322 369999999999999999999999999999999
Q ss_pred HHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccccccccc
Q 001384 895 IISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTTIAGTVG 974 (1088)
Q Consensus 895 ~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~ 974 (1088)
++.+...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.++++|||.+...... .....++..
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~ 147 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENM 147 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCcc
Confidence 998877899999999999999999999998 9999999999999999999999999987655322 122345678
Q ss_pred ccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHH
Q 001384 975 YVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSE 1054 (1088)
Q Consensus 975 y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1088)
|+|||......++.++||||+|+++|||++|+.|+........ . .... ..+......
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----------~----~~~~---------~~~~~~~~~ 204 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----------T----HTTL---------NIPEWVSEE 204 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----------c----cccc---------CCcccCCHH
Confidence 9999999888899999999999999999999988754211000 0 0000 011223456
Q ss_pred HHHHHhhhcccCCCCCCCHHHH
Q 001384 1055 LLRIGVRCTAEAPNARPNVKEV 1076 (1088)
Q Consensus 1055 l~~li~~cl~~dP~~RPs~~ei 1076 (1088)
+.+++.+|++.||++||++.+.
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCcc
Confidence 7889999999999999997443
No 390
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=2.8e-30 Score=294.68 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=194.4
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC-
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS- 878 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~- 878 (1088)
..++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++ ++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH----MKHENVIGLLDVFTPDLS 88 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHh----cCCCCccceeeeecCCcc
Confidence 4578999999999999999999965 789999999865321 223467889999987 67999999999887553
Q ss_pred -----eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 879 -----EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 879 -----~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
..++||||+ +++|.+++.. ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++++|||
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 6799988864 4689999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1088)
++...... .....++..|+|||.+.+ ..++.++||||+|+++|++++|+.||.+.... ............. .
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~-~ 236 (343)
T cd07880 164 LARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL--DQLMEIMKVTGTP-S 236 (343)
T ss_pred cccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCC-C
Confidence 98765321 223456889999998765 46889999999999999999999999865431 1111111000000 0
Q ss_pred ccccc--------h---hhcCCC----ccccHHHHHHHHHHHhhhcccCCCCCCCHHHHH
Q 001384 1033 RAVIP--------V---VLLGSG----LAEGAEEMSELLRIGVRCTAEAPNARPNVKEVL 1077 (1088)
Q Consensus 1033 ~~~~~--------~---~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1077 (1088)
.+..+ . .+.... ..........+.+++.+|++.||++||++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred HHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 00000 0 000000 000112334688999999999999999999998
No 391
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-30 Score=295.44 Aligned_cols=255 Identities=27% Similarity=0.438 Sum_probs=209.7
Q ss_pred HHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec--
Q 001384 800 ILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD-- 876 (1088)
Q Consensus 800 ~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~-- 876 (1088)
+...++.|++.++||.|.+|.||+++.+ +++.+|||+.... ...+++++.|.++++.. ..|||++.+||++..
T Consensus 14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~---~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKY---SHHPNVATFYGAFIKKD 89 (953)
T ss_pred CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhc---cCCCCcceEEEEEEEec
Confidence 3345677899999999999999999954 6888999988765 34566788888888874 489999999999874
Q ss_pred ---CCeEEEEEEecCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEee
Q 001384 877 ---GSEKILVYEYMEGGSLEDIISD--RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTD 951 (1088)
Q Consensus 877 ---~~~~~lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~D 951 (1088)
++..|+|||||.+|+..|+++. ..++.|..+..|.+.++.|+.+||.. .++|||||-.||+++.++.||+.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEee
Confidence 5689999999999999999875 45799999999999999999999999 999999999999999999999999
Q ss_pred cccceeecCCCCcccccccccccccCccccCCC-----CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhcc
Q 001384 952 FGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTW-----QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 952 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
||.+..+... .....+..||+.|||||++... .|+..+|+||+|++..||.-|.+|+.+..+. +.....
T Consensus 167 FGvSaQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm-----raLF~I 240 (953)
T KOG0587|consen 167 FGVSAQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLI 240 (953)
T ss_pred eeeeeeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----hhhccC
Confidence 9999877543 2345567899999999987643 5778899999999999999999999876441 111111
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+ ..+..+.....++.++|..|+.+|.++||++.++++
T Consensus 241 pRNPP-----------PkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 241 PRNPP-----------PKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CCCCC-----------ccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11111 122346788899999999999999999999998764
No 392
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=9.8e-31 Score=298.53 Aligned_cols=260 Identities=25% Similarity=0.341 Sum_probs=196.1
Q ss_pred HcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCe
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSE 879 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~ 879 (1088)
..++|++.+.||+|++|.||+|++. +++.||||++.... ......+.+|+.++++ +.|||++++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKH----MDHENVIGLLDVFTPASS 88 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHh----ccCCCHHHHHHHhhcccc
Confidence 3568999999999999999999976 57899999987532 2233557789999886 679999999998776554
Q ss_pred ------EEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 880 ------KILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 880 ------~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
.++|+||+ +++|.+++.. .++++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||
T Consensus 89 ~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 89 LEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999999 5699999875 4699999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1088)
.+...... .....++..|+|||...+ ..++.++||||+|+++|||++|+.||.+.... +.......... ...
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~~i~~~~~-~~~ 236 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLKRIMNLVG-TPD 236 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcC-CCC
Confidence 99765322 233467889999998754 46789999999999999999999999765431 11111110000 000
Q ss_pred ccccch--------h---hcCCCc----cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1033 RAVIPV--------V---LLGSGL----AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1033 ~~~~~~--------~---~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
...... . ...... ........++.+++.+|++.||++||++.||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000 0 000000 000112467889999999999999999999875
No 393
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=9.8e-32 Score=264.73 Aligned_cols=266 Identities=26% Similarity=0.349 Sum_probs=197.5
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec-----
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD----- 876 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~----- 876 (1088)
+.|+...+||+|.||.||+|+.+ +|+.||+|++..+. ...-....+|++++.. ++|+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~----lkHenv~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQL----LKHENVVNLIEICRTKATPT 92 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHH----hcchhHHHHHHHHhhccCCc
Confidence 45777789999999999999976 67889998775431 2223466789999986 689999999988753
Q ss_pred ---CCeEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeec
Q 001384 877 ---GSEKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDF 952 (1088)
Q Consensus 877 ---~~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Df 952 (1088)
....|+||++|+. +|.-++... .+++..++.+++.++..||.|+|.. .|+|||+||.|++|+.+|.+||+||
T Consensus 93 ~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 93 NRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred ccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecc
Confidence 2457999999987 999998765 5799999999999999999999999 9999999999999999999999999
Q ss_pred ccceeecCCCCcc---cccccccccccCccc-cCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhhccC
Q 001384 953 GLARVVSAGDSHV---STTIAGTVGYVAPEY-GQTWQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVMGYG 1027 (1088)
Q Consensus 953 g~a~~~~~~~~~~---~~~~~gt~~y~aPE~-~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~ 1027 (1088)
|+|+.+...+... .+..+-|..|.+||. +....|+++.|||..||++.||+|+.+-+.+..+ ...........-.
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 9998776543322 334566899999995 5567899999999999999999999999988755 2222222221100
Q ss_pred C--CCCCc------ccc--chhhcCCCcc-----ccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1028 R--HGPGR------AVI--PVVLLGSGLA-----EGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1028 ~--~~~~~------~~~--~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
. .++.- +.+ ++...+.... .+.....+..+++..++..||.+|+.+++++.
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 0 00000 011 0000000000 00111225778888999999999999999874
No 394
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=285.53 Aligned_cols=241 Identities=24% Similarity=0.296 Sum_probs=202.2
Q ss_pred CCCccceecccCceEEEEEEeCCCc-EEEEEEccccCcc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPDGR-EVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
+++.+..||-|+||.|-+++....+ .+|+|.+++.... .++.+..|-.+|.. .+.|.||++|-.|.+....|
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~----~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMME----CRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHh----cCchHHHHHHHHhccchhhh
Confidence 4555678999999999999976433 4899999876543 34568888888876 56999999999999999999
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
+.||-|=||.+...+++++.++...++.++..+++|++|||++ +||+|||||+|.+++.+|-+|+.|||+|+.+..+
T Consensus 497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999999999987643
Q ss_pred CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLL 1041 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1088)
..+-+++||+.|.|||++.....+.++|.||+|+++||+++|.+||.+.++. ..+..++..- +.
T Consensus 574 --~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm--ktYn~ILkGi------d~------ 637 (732)
T KOG0614|consen 574 --RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM--KTYNLILKGI------DK------ 637 (732)
T ss_pred --CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH--HHHHHHHhhh------hh------
Confidence 3455689999999999999999999999999999999999999999987652 2222222110 11
Q ss_pred CCCccccHHHHHHHHHHHhhhcccCCCCCCC
Q 001384 1042 GSGLAEGAEEMSELLRIGVRCTAEAPNARPN 1072 (1088)
Q Consensus 1042 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1072 (1088)
...|........++|++.+...|.+|..
T Consensus 638 ---i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 ---IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 1123445567788888999999999985
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=4.9e-30 Score=281.45 Aligned_cols=203 Identities=26% Similarity=0.371 Sum_probs=173.8
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
.-|..++.||-|+||+|.+++.. +...+|.|.+++.+.-. ...+++|-+||... ..+-||++|..|.+++..
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA----Dn~WVVrLyySFQDkdnL 704 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA----DNEWVVRLYYSFQDKDNL 704 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc----CCcceEEEEEEeccCCce
Confidence 34667789999999999999854 45678999998765333 34678899999863 578899999999999999
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee--
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV-- 958 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~-- 958 (1088)
|+||||++||++-.++-+.+-+.+.-++.++.++.+|+++.|.+ |+|||||||+|||||.+|++||+|||+++-+
T Consensus 705 YFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred EEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecccccccee
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999999998522
Q ss_pred -------cCCCCcc--------------------------------cccccccccccCccccCCCCCCcchhHHHHHHHH
Q 001384 959 -------SAGDSHV--------------------------------STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLA 999 (1088)
Q Consensus 959 -------~~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l 999 (1088)
..++... ....+||+.|+|||++....|+..+|+||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 1111000 1124699999999999999999999999999999
Q ss_pred HHHHhCCcCCCCCch
Q 001384 1000 MELATGRRALEGGEE 1014 (1088)
Q Consensus 1000 ~elltg~~p~~~~~~ 1014 (1088)
|||+.|+.||.+..+
T Consensus 862 ~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTP 876 (1034)
T ss_pred HHHhhCCCCccCCCC
Confidence 999999999987644
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=4e-30 Score=293.27 Aligned_cols=243 Identities=29% Similarity=0.378 Sum_probs=187.7
Q ss_pred CCccceecccCceE-EEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 807 FSEDRIIGKGGFGT-VYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
|.-.+++|.|+.|+ ||+|.. +|++||||++-.. ...-..+|+..++.- -.|||||++|+.-.++...|++.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eS---D~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQES---DEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhc---cCCCceEEEEeeccCCceEEEEeh
Confidence 33446789999975 799998 5889999999765 233557899988863 489999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC---C--CCEEEeecccce
Q 001384 886 YMEGGSLEDIISDRTR----LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK---E--GKALVTDFGLAR 956 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~----l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~---~--~~~kl~Dfg~a~ 956 (1088)
.|.. +|.|+++.... ......+.+..|++.|+++||+. +||||||||+||||+. + .+++|+|||+++
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9976 99999987421 11245578899999999999998 9999999999999986 3 478999999999
Q ss_pred eecCCCCcc--cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhC-CcCCCCCchhHHHHHHhhhccCCCCCCc
Q 001384 957 VVSAGDSHV--STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATG-RRALEGGEECLVEWGRRVMGYGRHGPGR 1033 (1088)
Q Consensus 957 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1088)
.+..+.... .....||.+|+|||++....-+.++||||+||++|+.++| .+||.+.-+......... .
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~-------~-- 730 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN-------Y-- 730 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc-------c--
Confidence 987654332 3457899999999999988888899999999999998886 999986432111000000 0
Q ss_pred cccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1034 AVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... . . ....++ +..++|.+|+++||..||+|.+|+.
T Consensus 731 -~L~--~---L-~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 731 -TLV--H---L-EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -cee--e---e-ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 000 0 0 001111 7778899999999999999999973
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=2.2e-29 Score=300.96 Aligned_cols=262 Identities=20% Similarity=0.217 Sum_probs=170.8
Q ss_pred HcCCCCccceecccCceEEEEEEeC-C----CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeE----
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP-D----GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGW---- 873 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~---- 873 (1088)
..++|++.+.||+|+||.||+|++. + +..||||++..... .+.+..|. +.. ..+.++..++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e~--l~~----~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNER--VRR----ACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHHH--HHh----hchhhHHHHHHhhhcc
Confidence 3568999999999999999999975 4 68999999865321 11112111 111 112222222211
Q ss_pred --EecCCeEEEEEEecCCCCHHHHHhhcCC--------------------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 001384 874 --CLDGSEKILVYEYMEGGSLEDIISDRTR--------------------LTWRRRLDIAIDVARALVFLHHECYPPIVH 931 (1088)
Q Consensus 874 --~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------------l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH 931 (1088)
...+...++||||+++++|.++++.... .....+..++.|++.||+|||++ +|+|
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiH 278 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVH 278 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 2456678999999999999999875421 12334668999999999999999 9999
Q ss_pred cCCCCCCEEEcC-CCCEEEeecccceeecCCCCcccccccccccccCccccCCC----------------------CCCc
Q 001384 932 RDVKASNVLLDK-EGKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTW----------------------QATT 988 (1088)
Q Consensus 932 ~DLkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~ 988 (1088)
|||||+|||++. ++.+||+|||+|+.+............+++.|+|||.+... .++.
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999999999986 58999999999987654444445567889999999954321 2445
Q ss_pred chhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC-CCccccchhhcCC---CccccHHHHHHHHHHHhhhcc
Q 001384 989 KGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG-PGRAVIPVVLLGS---GLAEGAEEMSELLRIGVRCTA 1064 (1088)
Q Consensus 989 ~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~ 1064 (1088)
++||||+||++|||+++..++... ...+........... ......+...... .............+|+.+|++
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 679999999999999977765432 122211111000000 0000000000000 000000112245589999999
Q ss_pred cCCCCCCCHHHHHH
Q 001384 1065 EAPNARPNVKEVLA 1078 (1088)
Q Consensus 1065 ~dP~~RPs~~eil~ 1078 (1088)
.||++||+++|+++
T Consensus 436 ~dP~kR~ta~e~L~ 449 (566)
T PLN03225 436 FKGRQRISAKAALA 449 (566)
T ss_pred CCcccCCCHHHHhC
Confidence 99999999999986
No 398
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=8.7e-29 Score=237.54 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=167.4
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
..-...||+|+||.|-+.++. +|+..|||++...-. +.+++...|+.+..+ ...+|.+|++||....+...++.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r---~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMR---TVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhcc---CCCCCeEEEeehhhhccccEEEeH
Confidence 344567999999999999865 799999999986532 334567778887766 358999999999999999999999
Q ss_pred EecCCCCHHHH----HhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 885 EYMEGGSLEDI----ISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 885 e~~~~gsL~~~----l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|.|+- +|..+ ++....+++.-+-+||..++.||.|||++. .+||||+||+||||+.+|++|+||||.+-.+..
T Consensus 125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 99965 87754 345667999999999999999999999995 899999999999999999999999999987652
Q ss_pred CCCcccccccccccccCccccC----CCCCCcchhHHHHHHHHHHHHhCCcCCCCCch
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQ----TWQATTKGDVYSFGVLAMELATGRRALEGGEE 1014 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~~l~elltg~~p~~~~~~ 1014 (1088)
+...+...|...|||||.+. ...|+-++||||+|+.+.||.+++.||+....
T Consensus 202 --SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 202 --SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred --hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 22233356788999999765 34789999999999999999999999987644
No 399
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-28 Score=230.91 Aligned_cols=264 Identities=22% Similarity=0.264 Sum_probs=192.1
Q ss_pred CCCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc--chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE--GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+|...++||+|.||+||+|+.+ +++.||+|+++-+... -.....+|+-+++. ++|+|||+++++...+...-+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllke----lkhknivrl~dvlhsdkkltl 78 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE----LKHKNIVRLHDVLHSDKKLTL 78 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHH----hhhcceeehhhhhccCceeEE
Confidence 4666789999999999999965 5788999999865322 22456789999886 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
|+|||.. +|..+... ++.++.+.++.++.|+++|+.+.|++ ++.|||+||+|.+|..+|++|++|||+++.+.-.
T Consensus 79 vfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 79 VFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred eHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 9999955 88888865 56799999999999999999999999 9999999999999999999999999999877532
Q ss_pred CCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHh--hh--ccCCCCCCcccc
Q 001384 962 DSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRR--VM--GYGRHGPGRAVI 1036 (1088)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~ 1036 (1088)
-. -....+-|..|.+|.++.+ .-|+...|+||.||++.|+....+|...+.+-..+..+. .. .-...++.....
T Consensus 155 vr-cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred eE-eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 21 1233456889999997655 568899999999999999998666644433322222211 11 111112222111
Q ss_pred chhhcCCCcccc---H----HHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1037 PVVLLGSGLAEG---A----EEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1037 ~~~~~~~~~~~~---~----~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+........+.. . +....=.+++.+.+.-+|..|.++++.++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 111110000000 1 11112346677888889999999998765
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=4.3e-28 Score=262.30 Aligned_cols=238 Identities=32% Similarity=0.475 Sum_probs=194.4
Q ss_pred CceEEEEEEeC-CCcEEEEEEccccCccc-hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCCCCHHH
Q 001384 817 GFGTVYRGVLP-DGREVAVKKLQREGLEG-EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEGGSLED 894 (1088)
Q Consensus 817 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 894 (1088)
+||.||+|+.. +++.+|+|++....... .+.+.+|++.+++ ++|+|++++++++......+++|||+++++|.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~----l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~ 76 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKK----LKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFD 76 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHh----CCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHH
Confidence 58999999987 48999999998765444 6789999999986 589999999999999999999999999999999
Q ss_pred HHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccccccccc
Q 001384 895 IISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTTIAGTVG 974 (1088)
Q Consensus 895 ~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~ 974 (1088)
++.....+++..++.++.+++.+++|||+. +++|+||+|+||+++.++.++++|||.+....... ......++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~ 151 (244)
T smart00220 77 LLKKRGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE 151 (244)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence 998776689999999999999999999999 99999999999999999999999999998765432 2334567889
Q ss_pred ccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHH
Q 001384 975 YVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSE 1054 (1088)
Q Consensus 975 y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1088)
|+|||......++.++||||+|+++|++++|..||...... ............ .... .......+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~~~~~~~~-----~~~~---------~~~~~~~~ 216 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-LELFKKIGKPKP-----PFPP---------PEWKISPE 216 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhccCC-----CCcc---------ccccCCHH
Confidence 99999988888899999999999999999999999763221 111111110000 0000 00003467
Q ss_pred HHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1055 LLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1055 l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 889999999999999999999986
No 401
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=3.1e-28 Score=282.91 Aligned_cols=256 Identities=19% Similarity=0.239 Sum_probs=176.0
Q ss_pred cCCCCccceecccCceEEEEEEe-----------------CCCcEEEEEEccccCccchHHH--------------HHHH
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVL-----------------PDGREVAVKKLQREGLEGEREF--------------RAEM 852 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~E~ 852 (1088)
.++|++.++||+|+||+||+|.+ ..++.||||++........++| ..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999964 2356899999875432222222 2345
Q ss_pred HHHhCCCC-CCCCCceeEEeeEEec--------CCeEEEEEEecCCCCHHHHHhhcC-----------------------
Q 001384 853 EVLSGNGF-GWPHPNLVTLYGWCLD--------GSEKILVYEYMEGGSLEDIISDRT----------------------- 900 (1088)
Q Consensus 853 ~~l~~~~~-~l~h~niv~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------- 900 (1088)
.++.++.. .+.++++++++++|.. +...++||||+++|+|.++++...
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 55444210 0123345677777653 356799999999999999986421
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcccccccccccccCcc
Q 001384 901 -RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPE 979 (1088)
Q Consensus 901 -~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE 979 (1088)
.+++..++.++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++..............+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 246778899999999999999999 9999999999999999999999999999765433222222234578999999
Q ss_pred ccCCCC--------------------C--CcchhHHHHHHHHHHHHhCCc-CCCCCch----------hHHHHHHhhhcc
Q 001384 980 YGQTWQ--------------------A--TTKGDVYSFGVLAMELATGRR-ALEGGEE----------CLVEWGRRVMGY 1026 (1088)
Q Consensus 980 ~~~~~~--------------------~--~~~~DvwslG~~l~elltg~~-p~~~~~~----------~~~~~~~~~~~~ 1026 (1088)
.+.... | ..+.||||+||++|+|++|.. ||..... ....|.....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~-- 458 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG-- 458 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc--
Confidence 764322 1 234799999999999999885 6653211 1111211000
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCC---CCCCCHHHHHH
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAP---NARPNVKEVLA 1078 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~eil~ 1078 (1088)
.. .+ .+..........+++.+++..+| .+|+|++|+++
T Consensus 459 -----~~--~~-------~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 -----QK--YD-------FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred -----cC--CC-------cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 00 00 00112234567788889998765 78999999975
No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=2e-28 Score=238.34 Aligned_cols=258 Identities=19% Similarity=0.273 Sum_probs=193.7
Q ss_pred cCCCCccceecccCceEEEEEEe-CCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC--eE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVL-PDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS--EK 880 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~--~~ 880 (1088)
.++|++.+++|+|.|+.||.|.. .+.+.++||+++.- .++.+.+|+.++..+. .||||+++++...+.. ..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~---gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLR---GGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhcc---CCCCeeehhhhhcCccccCc
Confidence 36799999999999999999994 46788999999753 5678999999999754 6999999999988754 56
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-CCCEEEeecccceeec
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-EGKALVTDFGLARVVS 959 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-~~~~kl~Dfg~a~~~~ 959 (1088)
.+|+||+.+.+...+- ..++..+++.++.+++.||+|+|++ ||+|||+||+|||||. .-.++++|+|+|..+.
T Consensus 111 aLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 7999999886665554 3478899999999999999999999 9999999999999985 4679999999999886
Q ss_pred CCCCcccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhh------------hcc
Q 001384 960 AGDSHVSTTIAGTVGYVAPEYGQ-TWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRV------------MGY 1026 (1088)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~------------~~~ 1026 (1088)
++.. ....+.+..|.-||.+- ...|+..-|+|||||++..|+..+.||..+.++..+.++-. ..|
T Consensus 185 p~~e--YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 185 PGKE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred CCce--eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 5432 23345566788999654 45789999999999999999999999987654333322211 111
Q ss_pred CCC--CCCcccc--------chhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1027 GRH--GPGRAVI--------PVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1027 ~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... .....++ ...+.... ..-...+.++++.+.+..|-.+|||++|.+.
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n---~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSEN---QHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccc---cccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 110 0000000 00000000 0111256788888999999999999999864
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-29 Score=252.34 Aligned_cols=262 Identities=26% Similarity=0.333 Sum_probs=195.8
Q ss_pred ccceecccCceEEEEEEeC-CCcEEEEEEcccc--CccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC-----eE
Q 001384 809 EDRIIGKGGFGTVYRGVLP-DGREVAVKKLQRE--GLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS-----EK 880 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~-----~~ 880 (1088)
-.+.||.|+||+||.+.+. +|+.||.|++..- .....+.+.+|++++.. ++|.|++..++...-.. +.
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcf----FkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSS----FRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHh----hccccHHHHHHhcCCCCchHHHHH
Confidence 3578999999999999975 7999999998753 23455788899999986 78999999888765432 45
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
|+++|.|.. +|..++-....++...+..+.+||++||.|||+. +|.||||||-|.+++++..+||+|||+|+....
T Consensus 133 YV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 788999966 8999888888899999999999999999999999 999999999999999999999999999998766
Q ss_pred CCCcccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCcCCCCCch-hHHHHHHhhh--------ccCCCC
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQT-WQATTKGDVYSFGVLAMELATGRRALEGGEE-CLVEWGRRVM--------GYGRHG 1030 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~elltg~~p~~~~~~-~~~~~~~~~~--------~~~~~~ 1030 (1088)
.+..-.+..+-|..|.|||++.+ ..|+.+.||||.||++.|++..+..|....+ .-.+.....+ .+.-++
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 55555555677899999998765 5799999999999999999999988876543 0001100000 000000
Q ss_pred CCccccc------hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1031 PGRAVIP------VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1031 ~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
.-..+.. ....-.....+...-.+.+.+...++..||++|.+..+.+.
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~ 342 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ 342 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence 0000000 00000011112233345667778999999999999988764
No 404
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1e-28 Score=269.74 Aligned_cols=200 Identities=25% Similarity=0.335 Sum_probs=174.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccc--------hHHHHHHHHHHhCCCCCCCCCceeEEeeEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEG--------EREFRAEMEVLSGNGFGWPHPNLVTLYGWC 874 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~~~~~l~h~niv~l~~~~ 874 (1088)
-..|...+.+|+|+||.|+.|.++ +..+|+||.+.++..-. -..+-.|+++|..+. .-.|+||++++++|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~-~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLN-KHSHENILKLLDFF 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhh-hcCccchhhhhhee
Confidence 356888999999999999999987 46789999998764221 134667899998754 23599999999999
Q ss_pred ecCCeEEEEEEecC-CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecc
Q 001384 875 LDGSEKILVYEYME-GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~-~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg 953 (1088)
++++.+|++||-.. +-+|.|+|+.+.++++.++..|++||+.|+++||++ +|||||||-+||.++.+|-+|++|||
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeecc
Confidence 99999999999864 559999999999999999999999999999999999 99999999999999999999999999
Q ss_pred cceeecCCCCcccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCcCCC
Q 001384 954 LARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQA-TTKGDVYSFGVLAMELATGRRALE 1010 (1088)
Q Consensus 954 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~elltg~~p~~ 1010 (1088)
.|..... .+...++||..|.|||++.+..| +..-|||++|+++|-++....||.
T Consensus 716 saa~~ks---gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKS---GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcC---CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9987653 34567899999999999999887 566899999999999998888875
No 405
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-27 Score=252.82 Aligned_cols=135 Identities=28% Similarity=0.382 Sum_probs=114.5
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCC----CCCCceeEEeeEEec--
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFG----WPHPNLVTLYGWCLD-- 876 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~----l~h~niv~l~~~~~~-- 876 (1088)
.++|.+.++||-|.|++||+|.+. ..+.||+|+++... ...+....|++++++++.. ..-.+||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 378999999999999999999975 57889999998652 3345678899999887632 233579999999874
Q ss_pred --CCeEEEEEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc
Q 001384 877 --GSEKILVYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD 942 (1088)
Q Consensus 877 --~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~ 942 (1088)
+.++|||+|++ |.+|..+|+.. +.++...+.+|++||+.||.|||.+| +|||.||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 56899999999 55999999764 35999999999999999999999999 999999999999983
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=245.35 Aligned_cols=260 Identities=24% Similarity=0.299 Sum_probs=197.7
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC----
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG---- 877 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~---- 877 (1088)
.+|.-.+.+|.|+- .|..|.+. .++.||+|++.... ....+...+|..++.. +.|+|+++++.++.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~----v~~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKC----VNHKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhh----hcccceeeeeeccCccccHH
Confidence 46777788999998 67777755 78999999987652 2233566778888775 6899999999998754
Q ss_pred --CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 878 --SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 878 --~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
...|+|||+|.. +|...++ -.++-..+.++..|+++|+.|||+. +|+||||||+||++..++.+||.|||+|
T Consensus 92 ~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 356999999965 9998887 3467788899999999999999999 9999999999999999999999999999
Q ss_pred eeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCC------
Q 001384 956 RVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRH------ 1029 (1088)
Q Consensus 956 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 1029 (1088)
+.-... ...+.++.|..|.|||++-+..|.+.+||||.||++.||++|+..|.+. +.+.+|.+.....+..
T Consensus 166 r~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~-d~idQ~~ki~~~lgtpd~~F~~ 242 (369)
T KOG0665|consen 166 RTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK-DHIDQWNKIIEQLGTPDPSFMK 242 (369)
T ss_pred cccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc-hHHHHHHHHHHHhcCCCHHHHH
Confidence 865432 4566788899999999988888999999999999999999999999853 4456664433211110
Q ss_pred ------------------CCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1030 ------------------GPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1030 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
....+.++...-......+......+.+++.+|+..+|++|.+++|+++
T Consensus 243 qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 243 QLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 0111111111111111112234456778888999999999999999875
No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=6.9e-28 Score=267.73 Aligned_cols=253 Identities=23% Similarity=0.347 Sum_probs=206.4
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
.++|+....+|.|.||.||||+++ +++..|||+++-.....-...++|+-+++. .+|||||.+++.+...+..++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~d----c~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRD----CRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeec----CCCcChHHHHhhhhhhcCcEE
Confidence 357889999999999999999976 689999999998755555667788888875 689999999999999999999
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGD 962 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 962 (1088)
.||||.||+|.|.-+--+++++.++..+.+...+|++|||++ +-+|||||-.||++++.|.+|++|||.+..+...
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitat- 165 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITAT- 165 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhh-
Confidence 999999999999988888999999999999999999999999 8899999999999999999999999998765432
Q ss_pred CcccccccccccccCccc---cCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchh
Q 001384 963 SHVSTTIAGTVGYVAPEY---GQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVV 1039 (1088)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~---~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1088)
-.....+.||+.|||||+ -..+.|..++|||+.|+...|+-.-+.|..+..+.-..+... +.-.
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT----------kS~~--- 232 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT----------KSGF--- 232 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh----------ccCC---
Confidence 223456789999999995 445688999999999999999998888866543321111110 1111
Q ss_pred hcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1040 LLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1040 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
..............+-++++.|+..+|.+||+++..+.
T Consensus 233 -qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 233 -QPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -CCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11112234455667888999999999999999987654
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.7e-25 Score=236.13 Aligned_cols=209 Identities=38% Similarity=0.637 Sum_probs=182.8
Q ss_pred ecccCceEEEEEEeCC-CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCCC
Q 001384 813 IGKGGFGTVYRGVLPD-GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEGG 890 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 890 (1088)
||+|++|.||++.... ++++++|++...... ....+.+|++.++. +.|++++++++++......+++|||++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~----l~~~~i~~~~~~~~~~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKK----LNHPNIVKLYGVFEDENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHh----cCCCCeeeEeeeeecCCeEEEEEecCCCC
Confidence 6899999999999864 899999999876332 24678899999987 57899999999999999999999999999
Q ss_pred CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-CCCEEEeecccceeecCCCCccccc
Q 001384 891 SLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-EGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 891 sL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
+|.+++... ..+++..++.++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+........ ....
T Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~ 152 (215)
T cd00180 77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKT 152 (215)
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhc
Confidence 999999876 5789999999999999999999999 9999999999999999 89999999999987654321 2233
Q ss_pred ccccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccc
Q 001384 969 IAGTVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAE 1047 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1088)
..+...|++||..... .++.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 5577899999988877 888999999999999999
Q ss_pred cHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1048 GAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1048 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 -----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 357788889999999999999999864
No 409
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=9.9e-27 Score=250.87 Aligned_cols=276 Identities=21% Similarity=0.213 Sum_probs=205.3
Q ss_pred cCHHHHHHHcCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCC--CCCCceeEEe
Q 001384 795 FTYSDILKATGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFG--WPHPNLVTLY 871 (1088)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~--l~h~niv~l~ 871 (1088)
+.+.-......+|.+....|+|-|++|..|.+. .|..||||++..... ..+.=..|+++|.++... -.--|+++++
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 334444456688999999999999999999976 588999999987632 234446788998876521 1234789999
Q ss_pred eEEecCCeEEEEEEecCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC-CCE
Q 001384 872 GWCLDGSEKILVYEYMEGGSLEDIISDRT---RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE-GKA 947 (1088)
Q Consensus 872 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~-~~~ 947 (1088)
..|...++.|+|+|-+.- +|.+.++..+ .+....++.++.|+.-||..|-.. +|+|.||||.||||.+. ..+
T Consensus 501 r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCccee
Confidence 999999999999999854 9999998765 488999999999999999999997 99999999999999865 468
Q ss_pred EEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH--HHHH----
Q 001384 948 LVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLV--EWGR---- 1021 (1088)
Q Consensus 948 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~--~~~~---- 1021 (1088)
||||||.|......+ -+.+.-+..|.|||++.+.+|+...|+||.||+|||+.||+..|.+...+-+ -+..
T Consensus 577 KLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk 653 (752)
T KOG0670|consen 577 KLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK 653 (752)
T ss_pred eeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence 999999998765433 2334456689999999999999999999999999999999999988643211 1111
Q ss_pred ---hhhccCCC------------------CCCcccc------------chhhcCC--CccccHHHHHHHHHHHhhhcccC
Q 001384 1022 ---RVMGYGRH------------------GPGRAVI------------PVVLLGS--GLAEGAEEMSELLRIGVRCTAEA 1066 (1088)
Q Consensus 1022 ---~~~~~~~~------------------~~~~~~~------------~~~~~~~--~~~~~~~~~~~l~~li~~cl~~d 1066 (1088)
.++.-... ....+.. ...+.+. ..........++.+|+..|+..|
T Consensus 654 ~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 654 FPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred CcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 00000000 0000000 0011111 11223455678899999999999
Q ss_pred CCCCCCHHHHHH
Q 001384 1067 PNARPNVKEVLA 1078 (1088)
Q Consensus 1067 P~~RPs~~eil~ 1078 (1088)
|++|.+..++++
T Consensus 734 P~KRit~nqAL~ 745 (752)
T KOG0670|consen 734 PEKRITVNQALK 745 (752)
T ss_pred hhhcCCHHHHhc
Confidence 999999998764
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.2e-26 Score=229.74 Aligned_cols=250 Identities=20% Similarity=0.300 Sum_probs=186.6
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeE-EecCCeEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGW-CLDGSEKIL 882 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~-~~~~~~~~l 882 (1088)
+.|.+.+.+|+|.||.+-+++++ +.+.+|+|.+.+. ....++|.+|..---.+. .|.||+.-|++ |+..+.+++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls---~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLS---PHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeec---cchhhhHHHHHHhhcCceEEE
Confidence 46889999999999999999987 5678999999876 345678999887544332 79999988874 566778889
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc--CCCCEEEeecccceeecC
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD--KEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~--~~~~~kl~Dfg~a~~~~~ 960 (1088)
++||++.|+|..-+...+ +.+....+++.|++.|+.|||++ ++||||||.+||||- +..++|++|||.++..+.
T Consensus 100 ~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred eeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999999887644 78888999999999999999999 999999999999994 335899999999876542
Q ss_pred CCCcccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCcCCCCCc---hhHHHHHHhhhccCCCCCC
Q 001384 961 GDSHVSTTIAGTVGYVAPEYGQT-----WQATTKGDVYSFGVLAMELATGRRALEGGE---ECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~ 1032 (1088)
.- .....+..|.|||.... ....+.+|||.||+++|.++||..||+... ....+|..+.. ....
T Consensus 176 tV----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~--rk~~-- 247 (378)
T KOG1345|consen 176 TV----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK--RKNP-- 247 (378)
T ss_pred ee----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc--ccCc--
Confidence 21 12234567899996432 234678999999999999999999998542 23334433322 1111
Q ss_pred ccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHH
Q 001384 1033 RAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAML 1080 (1088)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1080 (1088)
..+.. -......+.++.++-+.++|++|=...++.++.
T Consensus 248 --~~P~~--------F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 248 --ALPKK--------FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred --cCchh--------hcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 11111 112335677788899999999995555544443
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=4.1e-25 Score=236.08 Aligned_cols=198 Identities=36% Similarity=0.516 Sum_probs=174.4
Q ss_pred CCccceecccCceEEEEEEeCC-CcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPD-GREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
|++.+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+.+ ++|+|++++++++......++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~----~~~~~i~~~~~~~~~~~~~~~v~ 76 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKK----LKHPNIVKLYGVFEDPEPLYLVM 76 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHh----CCCCChhhheeeeecCCceEEEE
Confidence 5667899999999999999874 889999999876544 56688899998886 57999999999999999999999
Q ss_pred EecCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 885 EYMEGGSLEDIISDRTR-LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~~~-l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||+++++|.+++..... +++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++++|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 99999999999988766 89999999999999999999999 999999999999999999999999999987754321
Q ss_pred cccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHhCCcCCCC
Q 001384 964 HVSTTIAGTVGYVAPEYG-QTWQATTKGDVYSFGVLAMELATGRRALEG 1011 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~elltg~~p~~~ 1011 (1088)
.......++..|++||.. ....++.++|||++|++++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122345677889999988 667788899999999999999999999965
No 412
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=1.2e-25 Score=239.88 Aligned_cols=269 Identities=26% Similarity=0.327 Sum_probs=198.2
Q ss_pred HHHHHcCCCCccceecccCceEEEEEEeC----CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEE
Q 001384 799 DILKATGKFSEDRIIGKGGFGTVYRGVLP----DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWC 874 (1088)
Q Consensus 799 ~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~ 874 (1088)
++....+.|..+++||+|.|++||+|.+. ..+.||+|.+... ..-..+.+|++++..++ .+.||+++.+++
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~g---G~~ni~~~~~~~ 104 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLG---GSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhc---cchhhhcchhhh
Confidence 34455678999999999999999999964 3678999999765 23356889999998865 799999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc-CCCCEEEeecc
Q 001384 875 LDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD-KEGKALVTDFG 953 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~-~~~~~kl~Dfg 953 (1088)
...+...+|+||++.....++... ++..++..+++.+..||+++|.+ |||||||||+|++.+ ..++-.|.|||
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEech
Confidence 999999999999999888888754 67899999999999999999999 999999999999998 55788999999
Q ss_pred cceeecC--------C-------------------------CCc----------ccccccccccccCccccC-CCCCCcc
Q 001384 954 LARVVSA--------G-------------------------DSH----------VSTTIAGTVGYVAPEYGQ-TWQATTK 989 (1088)
Q Consensus 954 ~a~~~~~--------~-------------------------~~~----------~~~~~~gt~~y~aPE~~~-~~~~~~~ 989 (1088)
+|..+.. . ..+ ......||++|.|||++. ....+.+
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 9862110 0 000 011346999999999754 5567889
Q ss_pred hhHHHHHHHHHHHHhCCcCCCCCch---hHHHHHH---------hhhccCC--CCC---C---------ccccc-hhhcC
Q 001384 990 GDVYSFGVLAMELATGRRALEGGEE---CLVEWGR---------RVMGYGR--HGP---G---------RAVIP-VVLLG 1042 (1088)
Q Consensus 990 ~DvwslG~~l~elltg~~p~~~~~~---~~~~~~~---------~~~~~~~--~~~---~---------~~~~~-~~~~~ 1042 (1088)
+||||.||++..+++++.||....+ .+.+.+. .....+. .+. . .+... ..+..
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 9999999999999999999975432 2222211 1111111 000 0 00000 00001
Q ss_pred CCc------cccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1043 SGL------AEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1043 ~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... ......+..+++++.+|+..||.+|.+++|.++
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000 011122346889999999999999999999875
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=7.8e-27 Score=244.87 Aligned_cols=295 Identities=22% Similarity=0.218 Sum_probs=215.7
Q ss_pred cccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCccccc---cccccCcccceecccC-ccccccccccc
Q 001384 164 EISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRG---NIWNGLAQLVEFSVSE-NVLSGVVSSSV 239 (1088)
Q Consensus 164 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~---~~~~~l~~L~~L~L~~-n~l~~~~~~~~ 239 (1088)
++|..++ ..-+++.|..|+|+.+++.+|..+++|+.|||++|+|+. ..+.+++++..|.+.+ |.|+ .++...
T Consensus 60 eVP~~LP---~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~ 135 (498)
T KOG4237|consen 60 EVPANLP---PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGA 135 (498)
T ss_pred cCcccCC---CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhH
Confidence 4455544 457788999999999999999999999999999998775 5567788888887777 7887 578899
Q ss_pred ccCCCccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCc
Q 001384 240 FKENCSLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLE 319 (1088)
Q Consensus 240 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 319 (1088)
|.++.+|+.|.+.-|++.-...+.|..+++|..|.+.+|.+..+--..|..+..++.+.+..|.+.. .++++.+.
T Consensus 136 F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla 210 (498)
T KOG4237|consen 136 FGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLA 210 (498)
T ss_pred hhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhh
Confidence 9999999999999999988888899999999999999999984433488889999999998887432 23333322
Q ss_pred EEEcCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccc-cCCCCcCEEEccCCccCCCCC-ccccCCcCcceeecc
Q 001384 320 VLDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGI-LKLPNISRLDLSHNNFTGPLP-VEISQMRSLKFLILA 397 (1088)
Q Consensus 320 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~ 397 (1088)
.- +.- .+..++.........+.++++- ......| ..+..+..=..+.+...+.-| ..|..+++|+.|+|+
T Consensus 211 ~~-~a~------~~ietsgarc~~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnls 282 (498)
T KOG4237|consen 211 DD-LAM------NPIETSGARCVSPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLS 282 (498)
T ss_pred hH-Hhh------chhhcccceecchHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccC
Confidence 21 111 1222333333333333333221 1111111 112222221222333333444 458889999999999
Q ss_pred ccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCcc
Q 001384 398 HNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSG 475 (1088)
Q Consensus 398 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g 475 (1088)
+|+|+++-+.+|..+..+++|.|..|+|...-...|.++..|+.|+|.+|+|+..-|..|..+.+|..|+|-.|++..
T Consensus 283 nN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 283 NNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred CCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 999998889999999999999999999985555678889999999999999998889999999999999999999874
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=1.1e-22 Score=264.10 Aligned_cols=307 Identities=21% Similarity=0.240 Sum_probs=179.9
Q ss_pred ccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcC
Q 001384 245 SLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLS 324 (1088)
Q Consensus 245 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 324 (1088)
+|+.|++.++.+. .+|..+ ...+|++|+|.+|++. .++..+..+++|+.|+|++|.....+|. +..+++|+.|+|+
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~ 665 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLS 665 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEec
Confidence 5677777766654 556555 4567777777777776 5666666777777777776654455553 6667777777777
Q ss_pred CCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCc
Q 001384 325 SNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGS 404 (1088)
Q Consensus 325 ~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 404 (1088)
+|.....+|..++.+++|+.|++++|..+..++... ++++|+.|++++|...+.+|.. .++|+.|++++|.+. .
T Consensus 666 ~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~ 739 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-E 739 (1153)
T ss_pred CCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-c
Confidence 766555666666666666666666554443333221 4556666666665544344432 235556666666655 4
Q ss_pred CCcccCCCCCCcEEEccCCcCC-------CCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCC
Q 001384 405 IPAVYGNMPNLQTLDLSFNELT-------GPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNI 477 (1088)
Q Consensus 405 ~p~~~~~l~~L~~L~L~~N~l~-------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~i 477 (1088)
+|..+ .+++|+.|++.++... ...|......++|+.|+|++|...+.+|..++++++|+.|+|++|...+
T Consensus 740 lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~-- 816 (1153)
T PLN03210 740 FPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLE-- 816 (1153)
T ss_pred ccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcC--
Confidence 55443 3555555555543221 0011111223445555555554444555555555555555555543322
Q ss_pred CchhhccCCCCCccccccccCCcccccCCccccccccccCCCCCCCcceeeehhccccchhhhhcccCCcccccccCCCc
Q 001384 478 PPEVMTIGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPVCLPGLA 557 (1088)
Q Consensus 478 p~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 557 (1088)
T Consensus 817 -------------------------------------------------------------------------------- 816 (1153)
T PLN03210 817 -------------------------------------------------------------------------------- 816 (1153)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceeeeceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCccceEEEccCCcccccCCccccCCccCcE
Q 001384 558 SRTFQITGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLIVLNLTRNNFSGEIPSEFGNIKCLQN 637 (1088)
Q Consensus 558 ~~~~~~l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~l~~l~l~~N~l~~~~p~~~~~l~~L~~ 637 (1088)
.+|..+ ++++|+.|+|++|..-..+|.... .++.|+|++|.++ .+|.+++.+++|+.
T Consensus 817 -------------------~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~--nL~~L~Ls~n~i~-~iP~si~~l~~L~~ 873 (1153)
T PLN03210 817 -------------------TLPTGI-NLESLESLDLSGCSRLRTFPDIST--NISDLNLSRTGIE-EVPWWIEKFSNLSF 873 (1153)
T ss_pred -------------------eeCCCC-CccccCEEECCCCCcccccccccc--ccCEeECCCCCCc-cChHHHhcCCCCCE
Confidence 334333 345555666665544334444322 3567777777777 78888888888888
Q ss_pred EEccc-cccCCcCCcccccccccceeeccCCC
Q 001384 638 LDLSY-NNFSGPFPASFNNLTELSKLNISYNP 668 (1088)
Q Consensus 638 L~l~~-N~l~g~~p~~~~~l~~L~~l~l~~N~ 668 (1088)
|+|++ |+|. .+|..+..+++|+.++++++.
T Consensus 874 L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 874 LDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred EECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 88887 5565 578888888888888888764
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=8.9e-26 Score=236.98 Aligned_cols=383 Identities=24% Similarity=0.196 Sum_probs=259.7
Q ss_pred eeEEeccccccccccccccccCCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECcc-ccccCcc--cCCCCCCCceeec
Q 001384 80 RVNGLNLTDWNISGDIFNNFSALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSH-NILSGDL--NLSGLRSLEILDL 156 (1088)
Q Consensus 80 ~v~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~-n~l~~~~--~l~~l~~L~~L~L 156 (1088)
..+.|+|..|+|+...+.+|+.+.+|+.||||+|+|+.+-|++|.++++|..|-+-+ |+|+... .|.+|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 468999999999998889999999999999999999999999999999998887766 9999754 5999999999999
Q ss_pred ccccccccccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCccccc---------------cccccCccc
Q 001384 157 SVNRIHGEISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRG---------------NIWNGLAQL 221 (1088)
Q Consensus 157 s~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~---------------~~~~~l~~L 221 (1088)
.-|++..... ...+.+++|..|.+.+|.+..+....|..+..++.+.+..|.+-. .-.++....
T Consensus 148 Nan~i~Cir~-~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 148 NANHINCIRQ-DALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred ChhhhcchhH-HHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 9999985444 444567899999999999998888899999999999999987321 112222333
Q ss_pred ceecccCcccccccccccccCC-CccCEEEcCCCcccccCc-ccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeC
Q 001384 222 VEFSVSENVLSGVVSSSVFKEN-CSLEIFDLSENEFIGDFP-GEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFL 299 (1088)
Q Consensus 222 ~~L~L~~n~l~~~~~~~~~~~l-~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 299 (1088)
.-..+..+.+.. +.+..|... .++..--.+.+...+..| ..|..+++|+.|+|++|+|+++-+.+|.++..+++|.|
T Consensus 227 ~p~rl~~~Ri~q-~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 227 SPYRLYYKRINQ-EDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred chHHHHHHHhcc-cchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 333333333332 222233221 122111122222333333 45778888888888888888888888888888888888
Q ss_pred CCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccc---------------cCC
Q 001384 300 GKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGI---------------LKL 364 (1088)
Q Consensus 300 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~---------------~~l 364 (1088)
..|++..+-...|.++..|+.|+|.+|+|+...|..|..+..|..|.+-.|.+.-.-...++ .+-
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p 385 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSP 385 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCC
Confidence 88888777667788888888888888888888888888888888888877765332211111 111
Q ss_pred CCcCEEEccCCccC---CCCCccccCC---------cCcce-eeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCc
Q 001384 365 PNISRLDLSHNNFT---GPLPVEISQM---------RSLKF-LILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPP 431 (1088)
Q Consensus 365 ~~L~~L~Ls~N~l~---~~~p~~l~~l---------~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 431 (1088)
..++.++++++.+. ...|++.+-. +-+.+ ...|++.++ .+|..+ -..-.+|++.+|.++ .+|.
T Consensus 386 ~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~i--P~d~telyl~gn~~~-~vp~ 461 (498)
T KOG4237|consen 386 GFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGI--PVDVTELYLDGNAIT-SVPD 461 (498)
T ss_pred chhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCC--CchhHHHhcccchhc-ccCH
Confidence 23445555555433 1223332211 11222 223333333 444433 124456777777777 5666
Q ss_pred cccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCC
Q 001384 432 SIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNN 471 (1088)
Q Consensus 432 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 471 (1088)
. .+.+| .+|+++|+++-.--..|.++++|.+|.|+.|
T Consensus 462 ~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 462 E--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred H--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 5 55666 7777777776444456777777777777665
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=3.5e-24 Score=270.23 Aligned_cols=192 Identities=18% Similarity=0.206 Sum_probs=137.8
Q ss_pred CC-CceeEEeeEE-------ecCCeEEEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 001384 863 PH-PNLVTLYGWC-------LDGSEKILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRD 933 (1088)
Q Consensus 863 ~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~D 933 (1088)
.| +||+++++++ ......+.++||+ +++|+++++. ...+++.+++.++.||++||+|||++ +|+|||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvHrD 105 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVVHN 105 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceeecc
Confidence 45 5777777776 2334567889988 5599999975 34699999999999999999999999 999999
Q ss_pred CCCCCEEEcCCC-------------------CEEEeecccceeecCCCC---------------cccccccccccccCcc
Q 001384 934 VKASNVLLDKEG-------------------KALVTDFGLARVVSAGDS---------------HVSTTIAGTVGYVAPE 979 (1088)
Q Consensus 934 Lkp~NIll~~~~-------------------~~kl~Dfg~a~~~~~~~~---------------~~~~~~~gt~~y~aPE 979 (1088)
|||+||||+..+ .+|++|||+++....... .......||+.|+|||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 999999996544 455666666543211000 0011235788899999
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHH
Q 001384 980 YGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIG 1059 (1088)
Q Consensus 980 ~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 1059 (1088)
++.+..|+.++|||||||++|||++|..|+............... +.. .........+++
T Consensus 186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~------------~~~--------~~~~~~~~~~~~ 245 (793)
T PLN00181 186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVL------------PPQ--------ILLNWPKEASFC 245 (793)
T ss_pred hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhc------------Chh--------hhhcCHHHHHHH
Confidence 999889999999999999999999998887643222111111110 000 011123456778
Q ss_pred hhhcccCCCCCCCHHHHHH
Q 001384 1060 VRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1060 ~~cl~~dP~~RPs~~eil~ 1078 (1088)
.+|++++|.+||++.|+++
T Consensus 246 ~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 246 LWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHhCCCChhhCcChHHHhh
Confidence 8999999999999999975
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=3.7e-23 Score=248.11 Aligned_cols=174 Identities=25% Similarity=0.316 Sum_probs=92.2
Q ss_pred ccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcC
Q 001384 245 SLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLS 324 (1088)
Q Consensus 245 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 324 (1088)
.-..|+|++|+++ .+|..+. ++|+.|++++|+++ .+|.. .++|++|+|++|+++. +|.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeecc
Confidence 3556778887777 5666664 36778888888777 45532 4566777777776664 3432 2456666666
Q ss_pred CCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCc
Q 001384 325 SNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGS 404 (1088)
Q Consensus 325 ~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 404 (1088)
+|.++..+ .. .++|+.|+|++|+++ .+|.. +++|+.|+|++|+|+ .
T Consensus 271 ~N~L~~Lp-~l----------------------------p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~-~ 316 (788)
T PRK15387 271 SNPLTHLP-AL----------------------------PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLA-S 316 (788)
T ss_pred CCchhhhh-hc----------------------------hhhcCEEECcCCccc-ccccc---ccccceeECCCCccc-c
Confidence 66655321 11 123445555555555 33331 245555555555555 2
Q ss_pred CCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCc
Q 001384 405 IPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLS 474 (1088)
Q Consensus 405 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 474 (1088)
+|... .+|+.|++++|+|+ .+|... .+|++|+|++|+|+ .+|.. .++|+.|++++|+|+
T Consensus 317 Lp~lp---~~L~~L~Ls~N~L~-~LP~lp---~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~ 375 (788)
T PRK15387 317 LPALP---SELCKLWAYNNQLT-SLPTLP---SGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT 375 (788)
T ss_pred CCCCc---ccccccccccCccc-cccccc---cccceEecCCCccC-CCCCC---Ccccceehhhccccc
Confidence 33321 23445555555555 244311 34555555555555 34432 134445555555554
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=6.1e-23 Score=210.39 Aligned_cols=164 Identities=22% Similarity=0.207 Sum_probs=127.3
Q ss_pred CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCccccc
Q 001384 890 GSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTT 968 (1088)
Q Consensus 890 gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 968 (1088)
|+|.++++.+ ..+++.+++.++.|++.||+|||++ + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc------
Confidence 6899999874 4599999999999999999999998 5 999999999999999 99988764321
Q ss_pred ccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh---HHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 969 IAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC---LVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..... . .... ..
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~---~-~~~~----------~~ 129 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP---A-DDPR----------DR 129 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc---c-CCcc----------cc
Confidence 25789999999999999999999999999999999999999764331 111111111 0 0000 00
Q ss_pred cccHHHHH--HHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1046 AEGAEEMS--ELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1046 ~~~~~~~~--~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
..+..... ++.+++.+|++.+|++||++.|+++.+..+.
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 00112222 6899999999999999999999999887664
No 419
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=3.3e-22 Score=259.65 Aligned_cols=223 Identities=26% Similarity=0.255 Sum_probs=125.6
Q ss_pred ccCEEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcC
Q 001384 245 SLEIFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLS 324 (1088)
Q Consensus 245 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 324 (1088)
+|+.|++++|++. .+|..+..+++|+.|+|++|.....+| .++.+++|+.|+|++|.....+|..+.++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 3334444443333 233333444444444444433222333 23344444444444443333344444444444444444
Q ss_pred CCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccC--
Q 001384 325 SNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFN-- 402 (1088)
Q Consensus 325 ~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-- 402 (1088)
+|..-+.+|..+ ++++|+.|++++|..+...+. ...+|++|+|++|.++ .+|..+ .+++|+.|++.++...
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKL 762 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCccc-cccccc-cccccccccccccchhhc
Confidence 432222222222 344444444444432222111 1356788888888877 567655 5777888887764322
Q ss_pred -----CcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCC
Q 001384 403 -----GSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNI 477 (1088)
Q Consensus 403 -----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~i 477 (1088)
...|..+...++|+.|+|++|...+.+|.+++++++|+.|+|++|...+.+|..+ ++++|+.|+|++|.....+
T Consensus 763 ~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~ 841 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTF 841 (1153)
T ss_pred cccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccc
Confidence 1122223345789999999998877899999999999999999986555888776 7999999999988654333
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=9.6e-23 Score=244.60 Aligned_cols=267 Identities=25% Similarity=0.262 Sum_probs=168.9
Q ss_pred cCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCcccCCCCCCCceeecccccccccccCchhhhcccceEEeccC
Q 001384 104 QLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDLNLSGLRSLEILDLSVNRIHGEISFSFPAICEKLVVANLSL 183 (1088)
Q Consensus 104 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~ 183 (1088)
.-..|||++|.++ .+|..+. ++|+.|+|++|+|+.... .+++|++|+|++|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP~--lp~~Lk~LdLs~N~Lt--------------------- 255 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA--LPPELRTLEVSGNQLT--------------------- 255 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCCC--CCCCCcEEEecCCccC---------------------
Confidence 3556778888777 5676664 367777777777665332 1345555555555554
Q ss_pred ccCCCCCCccccCCCCCcEEEccCccccccccccCcccceecccCcccccccccccccCCCccCEEEcCCCcccccCccc
Q 001384 184 NNLTGRIDTCFDGCLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEFIGDFPGE 263 (1088)
Q Consensus 184 n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~ 263 (1088)
.. |. ..++|+.|++++|.++. ++.. ..+|+.|++++|+++ .+|..
T Consensus 256 ----sL-P~---lp~sL~~L~Ls~N~L~~-Lp~l-------------------------p~~L~~L~Ls~N~Lt-~LP~~ 300 (788)
T PRK15387 256 ----SL-PV---LPPGLLELSIFSNPLTH-LPAL-------------------------PSGLCKLWIFGNQLT-SLPVL 300 (788)
T ss_pred ----cc-cC---cccccceeeccCCchhh-hhhc-------------------------hhhcCEEECcCCccc-ccccc
Confidence 22 11 12345555555555441 1111 123445555555554 23331
Q ss_pred ccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhhhcccccc
Q 001384 264 VSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVK 343 (1088)
Q Consensus 264 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 343 (1088)
.++|+.|+|++|++++ +|... .+|+.|++++|++++ +|.. ..+|++|+|++|+|++.++ .
T Consensus 301 ---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~LP~-l-------- 360 (788)
T PRK15387 301 ---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLASLPT-L-------- 360 (788)
T ss_pred ---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCCCCC-C--------
Confidence 3456666666666663 33322 345666677776654 3431 1367777777777764321 1
Q ss_pred eeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCCcccCCCCCCcEEEccCC
Q 001384 344 ILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFN 423 (1088)
Q Consensus 344 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 423 (1088)
.++|+.|++++|+++ .+|.. ..+|+.|++++|+|+ .+|.. .++|+.|++++|
T Consensus 361 --------------------p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N 412 (788)
T PRK15387 361 --------------------PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVL---PSELKELMVSGN 412 (788)
T ss_pred --------------------Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCc---ccCCCEEEccCC
Confidence 134667777778777 45643 246888888999888 56654 357889999999
Q ss_pred cCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCchhhcc
Q 001384 424 ELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPEVMTI 484 (1088)
Q Consensus 424 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~ 484 (1088)
+|+ .+|... .+|+.|+|++|+|+ .+|..++++++|+.|+|++|+|+|.+|..+..+
T Consensus 413 ~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 413 RLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred cCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 998 577643 46788999999998 799999999999999999999999888876544
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1.2e-23 Score=209.87 Aligned_cols=248 Identities=22% Similarity=0.358 Sum_probs=190.9
Q ss_pred CccceecccCceEEEEEEeCCCcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 808 SEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 808 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
....+|.+...|..|+|+++ |..+++|++.... ....++|..|.-.++- +.||||+++++.|..+....++..
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lri----fshpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRI----FSHPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceee----ecCCchhhhhhhccCCCCceEeee
Confidence 34467889999999999996 5667778776443 2334688888887775 679999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 886 YMEGGSLEDIISDRTR--LTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~--l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||+.|+|+..+++... .+..++.+++.++|+|++|||+. .+-|----+....|+||++.+++|. ++-++. +
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~kf-----s 340 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTKF-----S 340 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-ccccee-----e
Confidence 9999999999998764 67889999999999999999997 3233344688999999999988874 222221 1
Q ss_pred cccccccccccccCccccCCCCCC---cchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhh
Q 001384 964 HVSTTIAGTVGYVAPEYGQTWQAT---TKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVL 1040 (1088)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1088)
.........+.||+||.++..+.+ .++|+|||++++||+.|...||.+..+... -+...+
T Consensus 341 fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec-----------------gmkial 403 (448)
T KOG0195|consen 341 FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC-----------------GMKIAL 403 (448)
T ss_pred eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh-----------------hhhhhh
Confidence 112223456899999988776543 578999999999999999999987544111 111122
Q ss_pred cCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1041 LGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1041 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
.+.+...|+.....+.+++.-|++.||.+||.++.|+-.||++.
T Consensus 404 eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 404 EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 23333345666778888999999999999999999999999875
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2e-21 Score=200.06 Aligned_cols=261 Identities=20% Similarity=0.312 Sum_probs=196.6
Q ss_pred CCCCccceecccCceEEEEEE-eCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGV-LPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
-.|+++++||+|+||+.+.|+ +-++++||||.-..... .-+++.|.+..+.+. ..+.|...|.|..++.+..+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~---g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLG---GTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHc---CCCCCCceeeeccccchhhhh
Confidence 368999999999999999999 34799999998765432 235667777666543 688999999999999999999
Q ss_pred EEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-----CEEEeeccccee
Q 001384 884 YEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-----KALVTDFGLARV 957 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-----~~kl~Dfg~a~~ 957 (1088)
+|.+ |-+|+|++.=. ++++.+++..+|.|++.-++|+|++ .+|+|||||+|+||...+ .+.++|||+|+.
T Consensus 103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 9999 66999988654 4699999999999999999999999 999999999999997443 588999999998
Q ss_pred ecCCCCcc------cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCC
Q 001384 958 VSAGDSHV------STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGP 1031 (1088)
Q Consensus 958 ~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1088)
+.+..... .....||.+||+-....+.+.+.+.|+-|+|-++++++.|..||++........ .|+..++
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~-----kYeKIGe 253 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE-----KYEKIGE 253 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH-----HHHHhcc
Confidence 87654332 334679999999999999999999999999999999999999999864321111 1111222
Q ss_pred CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1032 GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
.+..-+..... ...+.++..-++-.-..+-.+-|..+-+...+..+++
T Consensus 254 ~Kr~T~i~~Lc------~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 254 TKRSTPIEVLC------EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred ccccCCHHHHH------hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 22222211111 1123344444444445577778888888777777654
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.9e-21 Score=217.25 Aligned_cols=260 Identities=22% Similarity=0.264 Sum_probs=192.6
Q ss_pred CCCccceecccCceEEEEEEeCCC--cEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEE-ecCCeEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPDG--REVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWC-LDGSEKIL 882 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~-~~~~~~~l 882 (1088)
+|.+.+.||+|+||.||.|..... ..+|+|............+..|..++..+.....-+++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997653 478888887653332226677777777643211236888888888 47788999
Q ss_pred EEEecCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC-----CCEEEeecccc
Q 001384 883 VYEYMEGGSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE-----GKALVTDFGLA 955 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~-----~~~kl~Dfg~a 955 (1088)
||+.+ |.+|.++.+.. ++++..++.+++.|++.+|+++|+. |++||||||.|+++... ..+.+.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999 66999988544 4799999999999999999999999 99999999999999865 36899999999
Q ss_pred e--eecCCCC----cc---cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhh
Q 001384 956 R--VVSAGDS----HV---STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVM 1024 (1088)
Q Consensus 956 ~--~~~~~~~----~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~ 1024 (1088)
+ .+..... .. .....||.+|.+++...+.+.+.+.|+||++.++.|+..|..||...... .........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8 3322211 11 22456999999999999999999999999999999999999999765431 111111111
Q ss_pred ccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCC
Q 001384 1025 GYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILP 1085 (1088)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 1085 (1088)
. ..... . ....+..+.++...+-..+...+|....+...++.+..
T Consensus 255 ~--------~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 255 K--------LLTDR-----F---GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred h--------hcccc-----c---cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 0 00000 0 11122344444445555899999999999999887754
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=1.6e-21 Score=217.37 Aligned_cols=164 Identities=25% Similarity=0.248 Sum_probs=127.8
Q ss_pred HcCCCCccceecccCceEEEEEEeC--CCcEEEEEEccccC-----ccchHHHHHHHHHHhCCCCCCCCCceeE-EeeEE
Q 001384 803 ATGKFSEDRIIGKGGFGTVYRGVLP--DGREVAVKKLQREG-----LEGEREFRAEMEVLSGNGFGWPHPNLVT-LYGWC 874 (1088)
Q Consensus 803 ~~~~~~~~~~LG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~~~~~l~h~niv~-l~~~~ 874 (1088)
..++|.+.+.||+|+||+||+|.++ +++.||||+..... ......+.+|++++.+ +.|+|+++ ++++
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~----L~h~~iv~~l~~~- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKT----VRGIGVVPQLLAT- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHh----ccCCCCCcEEEEc-
Confidence 4567999999999999999999865 47778999875331 1224568999999997 67999985 4432
Q ss_pred ecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCCEEEcCCCCEEEeecc
Q 001384 875 LDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDV-KASNVLLDKEGKALVTDFG 953 (1088)
Q Consensus 875 ~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DL-kp~NIll~~~~~~kl~Dfg 953 (1088)
+..|+||||++|++|... ... . ...++.|+++||+|+|++ +|+|||| ||+||+++.++.+||+|||
T Consensus 91 ---~~~~LVmE~~~G~~L~~~-~~~---~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLHLA-RPH---G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred ---CCcEEEEEccCCCCHHHh-Ccc---c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999732 111 1 246889999999999999 9999999 9999999999999999999
Q ss_pred cceeecCCCCcc-------cccccccccccCccccCCC
Q 001384 954 LARVVSAGDSHV-------STTIAGTVGYVAPEYGQTW 984 (1088)
Q Consensus 954 ~a~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~ 984 (1088)
+|+.+....... -....++..|+|||++...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999775432111 1345678889999986643
No 425
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=2e-21 Score=235.30 Aligned_cols=42 Identities=7% Similarity=-0.043 Sum_probs=32.9
Q ss_pred hcccCCCchhhHHHHHHHHhhcccCCCCCcccccc----cCCCCCCcccCC
Q 001384 25 THVAGDSLETDREVLSNLRSFLENNNPVNEGHYMQ----WNQSSSPCEWPG 71 (1088)
Q Consensus 25 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~s----W~~~~~~C~W~g 71 (1088)
||..+.+...+.+.++.+++.+.. ++.+++ |+.++|+|-=..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~l~~-----p~~~~~~~~~~~~~~~fc~~~~ 99 (754)
T PRK15370 54 CHPPETASPEEIKSKFECLRMLAF-----PAYADNIQYSRGGADQYCILSE 99 (754)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcC-----CchhhccccccCCCCcccccCC
Confidence 677888888899999999999964 234555 999999997544
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.8e-21 Score=191.62 Aligned_cols=259 Identities=21% Similarity=0.293 Sum_probs=190.0
Q ss_pred cCCCCccceecccCceEEEEEEe-CCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVL-PDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
.++|.++++||.|+||.+|.|.. .+|++||||+-..... .-++..|.++...++ .-..|..+..+..+.....+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~---~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQ---GGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhc---cCCCCchhhhhcccccccee
Confidence 47899999999999999999994 5899999998876532 234555666655543 34456666777788888999
Q ss_pred EEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC---CCEEEeecccceee
Q 001384 883 VYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE---GKALVTDFGLARVV 958 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~---~~~kl~Dfg~a~~~ 958 (1088)
|||.. |.+|.+++.- .+.++..+++-+|-|++.-++|+|.+ ++|||||||+|+|..-+ ..+.++|||+|+.+
T Consensus 89 VMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred eeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 99999 6699998864 34699999999999999999999999 89999999999999643 46889999999987
Q ss_pred cCCCCcc------cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHH-HHHHhhhccCCCCC
Q 001384 959 SAGDSHV------STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLV-EWGRRVMGYGRHGP 1031 (1088)
Q Consensus 959 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~ 1031 (1088)
.+..... .....||.+|.+-....+.+.+.+.|+-|+|.++..+-.|..||++.....- +-+..+.. ..
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E-kK--- 240 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE-KK--- 240 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH-hh---
Confidence 6533221 3456799999988877777888999999999999999999999998644211 11111110 00
Q ss_pred CccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1032 GRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
.......+. ...+.++...+.-|-...-++-|+..-+-+.+.-+
T Consensus 241 -~s~~ie~LC-------~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 241 -MSTPIEVLC-------KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred -cCCCHHHHh-------CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 000111111 12245666666677777777778777666665544
No 427
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=2.9e-22 Score=234.60 Aligned_cols=254 Identities=22% Similarity=0.226 Sum_probs=188.1
Q ss_pred CCCccceecccCceEEEEEEeCCCcEEEEEEccccCcc-chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLE-GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
+|...+.+|++.|=+|.+|++++|. |+||++-+.... .-+.+.++++-.+.. .++|||++++.-+-..+...|+|-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~--l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFA--LMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHH--hhcCCcccchHHHHHhhHHHHHHH
Confidence 5677789999999999999998887 999998765422 234444444433321 268999999999888888889999
Q ss_pred EecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCc
Q 001384 885 EYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSH 964 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 964 (1088)
+|..+ +|+|.+..+..+..-+.+.|+.|++.|+.-+|.. ||+|||||.+||||++-.-+.|+||..-+...-.+..
T Consensus 101 qyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 101 QYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 99977 9999999988899999999999999999999999 9999999999999999999999999876543222222
Q ss_pred c--cccc----cccccccCccccCCC----------C-CCcchhHHHHHHHHHHHHhC-CcCCCCCchhHHHHHHhhhcc
Q 001384 965 V--STTI----AGTVGYVAPEYGQTW----------Q-ATTKGDVYSFGVLAMELATG-RRALEGGEECLVEWGRRVMGY 1026 (1088)
Q Consensus 965 ~--~~~~----~gt~~y~aPE~~~~~----------~-~~~~~DvwslG~~l~elltg-~~p~~~~~~~~~~~~~~~~~~ 1026 (1088)
+ ...+ ..-..|.|||.+... . .+++.||||+||+++|+++- ++||.- .+...|
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---------SQL~aY 247 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---------SQLLAY 247 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---------HHHHhH
Confidence 1 1222 223479999965431 2 56789999999999999984 666652 112222
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
.... . ..+..+... -+...+.+++..|++.||++|.+++|.++....+.
T Consensus 248 r~~~--~-~~~e~~Le~------Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 248 RSGN--A-DDPEQLLEK------IEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred hccC--c-cCHHHHHHh------CcCccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 2221 1 111111111 11126888999999999999999999999876553
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=7.7e-22 Score=234.77 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=187.3
Q ss_pred ccceecccCceEEEEEEeC-CCcEEEEEEcccc--CccchHH----HHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEE
Q 001384 809 EDRIIGKGGFGTVYRGVLP-DGREVAVKKLQRE--GLEGERE----FRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKI 881 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~----~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~ 881 (1088)
..+++|.|++|.|+.+... ..+.++.|.+... ....+.. +..|+-+-. .++|||++..+..+.+....+
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~----~l~h~~~~e~l~~~~~~~~~~ 397 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGS----SLSHPNIIETLDIVQEIDGIL 397 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecc----cccCCchhhhHHHHhhcccch
Confidence 3578999999988887754 3444455444311 1122222 233333332 488999988887777766666
Q ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC
Q 001384 882 LVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG 961 (1088)
Q Consensus 882 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~ 961 (1088)
-+||||++ +|..++....+++..++..+++|+..|++|+|.+ ||.|||+|++|++++.+|.+||+|||.+..+...
T Consensus 398 ~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 398 QSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 66999999 9999999888899999999999999999999999 9999999999999999999999999999887654
Q ss_pred CC---cccccccccccccCccccCCCCCCc-chhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccc
Q 001384 962 DS---HVSTTIAGTVGYVAPEYGQTWQATT-KGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIP 1037 (1088)
Q Consensus 962 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1088)
.. ......+|+..|+|||++...+|++ ..||||.|++++.|.+|+.||........++ ....+..+..
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--~~~~~~~~~~------ 545 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--KTNNYSDQRN------ 545 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--hhhccccccc------
Confidence 33 4456678999999999999988876 5799999999999999999998764432222 0000111010
Q ss_pred hhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1038 VVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
............+.+-..++.+|++.||.+|.++++|++
T Consensus 546 --~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 --IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred --cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 001111123344567788899999999999999999975
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=3.6e-19 Score=202.52 Aligned_cols=256 Identities=30% Similarity=0.441 Sum_probs=197.8
Q ss_pred CCccceecccCceEEEEEEeCCCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCC-ceeEEeeEEecCCeEEE
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHP-NLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~-niv~l~~~~~~~~~~~l 882 (1088)
|...+.||.|+||.||++.+. ..+++|.+....... ...+.+|+..+.. +.|+ +++++++++......++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~----~~~~~~i~~~~~~~~~~~~~~~ 75 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILAS----LNHPPNIVKLYDFFQDEGSLYL 75 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHH----ccCCcceeeEEEEEecCCEEEE
Confidence 667789999999999999986 789999998764332 5678889888876 5566 79999999987788899
Q ss_pred EEEecCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC-CEEEeecccceee
Q 001384 883 VYEYMEGGSLEDIISDRT---RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG-KALVTDFGLARVV 958 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~-~~kl~Dfg~a~~~ 958 (1088)
++||+.++++.+++.... .++......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++.+
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~ 152 (384)
T COG0515 76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152 (384)
T ss_pred EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence 999999999998887765 799999999999999999999999 999999999999999998 7999999999866
Q ss_pred cCCCCc-----ccccccccccccCccccCC---CCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhhccCC
Q 001384 959 SAGDSH-----VSTTIAGTVGYVAPEYGQT---WQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVMGYGR 1028 (1088)
Q Consensus 959 ~~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~ 1028 (1088)
...... ......++..|+|||.... ..+....|+|++|++++++++|..||...... ..+..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (384)
T COG0515 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT 232 (384)
T ss_pred CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC
Confidence 543322 2456789999999998887 58889999999999999999999998765420 1111111110000
Q ss_pred CCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHH
Q 001384 1029 HGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1079 (1088)
.......... ........+.+++.+|+..+|..|.++.+....
T Consensus 233 -~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 233 -PSLASPLSPS-------NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -cccccccCcc-------ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000000000 001223567788889999999999998887653
No 430
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=8.9e-21 Score=229.64 Aligned_cols=96 Identities=27% Similarity=0.436 Sum_probs=48.9
Q ss_pred cCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccc
Q 001384 367 ISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLAN 446 (1088)
Q Consensus 367 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 446 (1088)
|+.|+|++|+++ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++
T Consensus 243 L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~ 313 (754)
T PRK15370 243 IQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQS 313 (754)
T ss_pred ccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcC
Confidence 445555555554 3444432 34555555555555 3444332 35556666666655 3444332 3455556666
Q ss_pred cccccCCCccccCCCCCCeEEccCCcCc
Q 001384 447 NSLSGEIPGEIGNCTSLLWLNLSNNKLS 474 (1088)
Q Consensus 447 N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 474 (1088)
|+++ .+|..+. ++|+.|++++|.++
T Consensus 314 N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt 338 (754)
T PRK15370 314 NSLT-ALPETLP--PGLKTLEAGENALT 338 (754)
T ss_pred Cccc-cCCcccc--ccceeccccCCccc
Confidence 6665 3444332 45566666666555
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1.1e-19 Score=186.77 Aligned_cols=139 Identities=20% Similarity=0.239 Sum_probs=106.3
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEccccCcc--c-------h-----------------HHHHHHHHHHhCCCCCCC
Q 001384 810 DRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLE--G-------E-----------------REFRAEMEVLSGNGFGWP 863 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~~~~~l~ 863 (1088)
...||+|+||.||+|.+.+|+.||||+++..... . . .....|++.+.++ .
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~ 77 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL----V 77 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH----H
Confidence 4679999999999999888999999999764221 1 0 1123477777763 3
Q ss_pred CCceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCCEEEc
Q 001384 864 HPNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFL-HHECYPPIVHRDVKASNVLLD 942 (1088)
Q Consensus 864 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yL-H~~~~~~ivH~DLkp~NIll~ 942 (1088)
++++.....+.. ...++||||++++++........++++.++..++.|++.+|+|+ |+. +|+||||||+||+++
T Consensus 78 ~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 78 TAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred HCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 444422222111 22389999999988776544456789999999999999999999 687 999999999999998
Q ss_pred CCCCEEEeecccceee
Q 001384 943 KEGKALVTDFGLARVV 958 (1088)
Q Consensus 943 ~~~~~kl~Dfg~a~~~ 958 (1088)
++.++++|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 578999999999754
No 432
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.4e-19 Score=187.14 Aligned_cols=172 Identities=16% Similarity=0.171 Sum_probs=133.0
Q ss_pred HHcCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccchHH---------HHHHHHHHhCCCCCCCCCceeEEee
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGERE---------FRAEMEVLSGNGFGWPHPNLVTLYG 872 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~~~~~l~h~niv~l~~ 872 (1088)
-..++|+..+++|.|+||.||.+.. ++..+|||.+.......++. +.+|+..+.+ +.|++|..+.+
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~r----L~~~GI~~~~d 102 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDR----VRSEGLASLND 102 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHH----HHHCCCCcceE
Confidence 3468999999999999999999766 57789999998654333332 5788887776 57999999988
Q ss_pred EEecC--------CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC
Q 001384 873 WCLDG--------SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE 944 (1088)
Q Consensus 873 ~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~ 944 (1088)
++... ...++||||++|.+|.++.. +++ ....+++.++..+|+. |++|||++|+||+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKN 171 (232)
T ss_pred eeeecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCC
Confidence 86533 35789999999999988742 233 2456999999999999 99999999999999998
Q ss_pred CCEEEeecccceeecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHH
Q 001384 945 GKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELA 1003 (1088)
Q Consensus 945 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell 1003 (1088)
+ ++++|||........... . .+.....|..++|+|+||+.+..+.
T Consensus 172 g-i~liDfg~~~~~~e~~a~--d-----------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK--D-----------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhH--H-----------HHHHHhHhcccccccceeEeehHHH
Confidence 8 999999988654211110 0 0333445667999999999887664
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.4e-18 Score=175.40 Aligned_cols=186 Identities=18% Similarity=0.143 Sum_probs=140.4
Q ss_pred ccceecccCceEEEEEEeCCCcEEEEEEccccCccch----HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEE
Q 001384 809 EDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGE----REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVY 884 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~ 884 (1088)
+...|++|+||+||.+.. .+.+++.+.+.......+ ..+.+|++++.++. +|+++.+++++ ...+++|
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~---~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLD---GLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcC---CCCCCCEEEEE----cCEEEEE
Confidence 457899999999997776 678888887776533211 24789999999853 46888888886 3468999
Q ss_pred EecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCCEEEcCCCCEEEeecccceeecCCCC
Q 001384 885 EYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDV-KASNVLLDKEGKALVTDFGLARVVSAGDS 963 (1088)
Q Consensus 885 e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DL-kp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 963 (1088)
||+.|.+|...... ....++.|++.+++++|++ ||+|||| ||+||+++.++.++|+|||+|........
T Consensus 78 eyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 78 SYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred eeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 99999999765421 1245788999999999999 9999999 79999999999999999999986543221
Q ss_pred c----c--------cccccccccccCccccC--CCCCCcchhHHHHHHHHHHHHhCCcCCCCC
Q 001384 964 H----V--------STTIAGTVGYVAPEYGQ--TWQATTKGDVYSFGVLAMELATGRRALEGG 1012 (1088)
Q Consensus 964 ~----~--------~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~~l~elltg~~p~~~~ 1012 (1088)
. . ......++.|++|+... ...--...++++-|+.+|.++|++.++-+.
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 0 0 11123577788887322 222235679999999999999999987654
No 434
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.8e-18 Score=178.82 Aligned_cols=140 Identities=21% Similarity=0.207 Sum_probs=108.9
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEccccCccc--------------------------hHHHHHHHHHHhCCCCCCC
Q 001384 810 DRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG--------------------------EREFRAEMEVLSGNGFGWP 863 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~~~~~l~ 863 (1088)
.+.||+|++|.||+|.+.+|+.||||+++...... ......|.+.+.+ +.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~----l~ 77 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR----LY 77 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH----HH
Confidence 47899999999999998789999999988652110 1123467777765 45
Q ss_pred CCceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCEEEc
Q 001384 864 HPNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHH-ECYPPIVHRDVKASNVLLD 942 (1088)
Q Consensus 864 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~~ivH~DLkp~NIll~ 942 (1088)
|+++.....+... ..++||||++|+++........+++..++.+++.|++.++.|+|+ . ||+||||||+||+++
T Consensus 78 ~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 78 EAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred hCCCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 7766433333322 248999999988655433344568889999999999999999999 8 999999999999998
Q ss_pred CCCCEEEeecccceeec
Q 001384 943 KEGKALVTDFGLARVVS 959 (1088)
Q Consensus 943 ~~~~~kl~Dfg~a~~~~ 959 (1088)
++.++++|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 8999999999998764
No 435
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=8.9e-20 Score=205.11 Aligned_cols=226 Identities=28% Similarity=0.332 Sum_probs=182.5
Q ss_pred eecccCceEEEEEEe----CCCcEEEEEEccccCccch--HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEE
Q 001384 812 IIGKGGFGTVYRGVL----PDGREVAVKKLQREGLEGE--REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYE 885 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e 885 (1088)
++|+|+||.|+.++. ..|.-+|.|+.++...... .....|..++.... .||.+|++...+..+...+++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~---~~~f~v~lhyafqt~~kl~l~ld 77 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH---NTPFLVKLHYAFQTDGKLYLILD 77 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc---CCCceeeeeeeeccccchhHhhh
Confidence 379999999998763 2467788888876543222 13444555555432 59999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcc
Q 001384 886 YMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHV 965 (1088)
Q Consensus 886 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 965 (1088)
|..||.+...+.....+++.....+...++-+++++|+. +|+|||+|++||+++.+|++++.|||+++..-....
T Consensus 78 ~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-- 152 (612)
T KOG0603|consen 78 FLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-- 152 (612)
T ss_pred hcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh--
Confidence 999999999998888899999999999999999999999 999999999999999999999999999886543222
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCc
Q 001384 966 STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGL 1045 (1088)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1088)
.+||..|||||++. .....+|+||||++++||+||..||.. +..+.+. ....
T Consensus 153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------~~~~~Il-----------------~~~~ 204 (612)
T KOG0603|consen 153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------DTMKRIL-----------------KAEL 204 (612)
T ss_pred ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------HHHHHHh-----------------hhcc
Confidence 28999999999998 567889999999999999999999986 2222222 1112
Q ss_pred cccHHHHHHHHHHHhhhcccCCCCCCCH
Q 001384 1046 AEGAEEMSELLRIGVRCTAEAPNARPNV 1073 (1088)
Q Consensus 1046 ~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1073 (1088)
..+......+.+++.++...+|..|.-.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 2355666778888889999999999855
No 436
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.7e-18 Score=208.84 Aligned_cols=249 Identities=19% Similarity=0.178 Sum_probs=188.3
Q ss_pred HHcCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCccc---hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG---EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
.-.+.|.+.+.||+|+||+||+|...+|+.||+|+-+....-. -.+++..++ . .--+-|.++..++...+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~------~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-P------QMLPSIMHISSAHVFQN 767 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-h------hhhcchHHHHHHHccCC
Confidence 3456788999999999999999998889999999987653221 122222222 1 12355667777777788
Q ss_pred eEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc-------CCCCEEEee
Q 001384 879 EKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD-------KEGKALVTD 951 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~-------~~~~~kl~D 951 (1088)
..++|+||.+.|+|.|++...+.++|.-++.++.|+++.+++||.. +||||||||+|.|+. ....++|+|
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred cceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEe
Confidence 8899999999999999999888899999999999999999999999 999999999999995 344699999
Q ss_pred cccceeecCC-CCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCC
Q 001384 952 FGLARVVSAG-DSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHG 1030 (1088)
Q Consensus 952 fg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1030 (1088)
||.+..+..- +.......++|..+-.+|+..++++++.+|.|.++.+++-|+.|++--... +..+
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~~~--------------g~~~ 910 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEVKN--------------GSSW 910 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHhcC--------------Ccce
Confidence 9998765432 233455678899999999999999999999999999999999988542000 0000
Q ss_pred CCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhC
Q 001384 1031 PGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKIL 1084 (1088)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~ 1084 (1088)
.....++.. .......+++..+|++|-..=|...++...|++++
T Consensus 911 ~~~~~~~Ry----------~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 911 MVKTNFPRY----------WKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred eccccchhh----------hhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 001001110 11123445666788888888889999999888875
No 437
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.9e-18 Score=181.85 Aligned_cols=196 Identities=20% Similarity=0.268 Sum_probs=141.1
Q ss_pred CCCCceeEEeeEEec---------------------------CCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHH
Q 001384 862 WPHPNLVTLYGWCLD---------------------------GSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDV 914 (1088)
Q Consensus 862 l~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi 914 (1088)
-+|||||++.++|.+ +...|+||...+. +|..++..+. .+....+-+..|+
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQl 350 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQL 350 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHHH
Confidence 379999999988753 2356899999876 9999997766 4666677799999
Q ss_pred HHHHHHHHhcCCCCeEecCCCCCCEEEc--CCC--CEEEeecccceeecCCC---Ccc--cccccccccccCccccCCCC
Q 001384 915 ARALVFLHHECYPPIVHRDVKASNVLLD--KEG--KALVTDFGLARVVSAGD---SHV--STTIAGTVGYVAPEYGQTWQ 985 (1088)
Q Consensus 915 ~~~L~yLH~~~~~~ivH~DLkp~NIll~--~~~--~~kl~Dfg~a~~~~~~~---~~~--~~~~~gt~~y~aPE~~~~~~ 985 (1088)
++|+.|||.+ ||.|||+|.+||++. +|+ .+.|+|||.+---.... .+. .-...|...-||||+....+
T Consensus 351 LEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 9999999999 999999999999995 333 46789999864321100 011 11234667789999865432
Q ss_pred C------CcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHH
Q 001384 986 A------TTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIG 1059 (1088)
Q Consensus 986 ~------~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 1059 (1088)
- -.|+|.|+.|.+.||+++...||.+..+...+-.. ...... ..-++.++..+.+++
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~---------Yqe~qL--------Palp~~vpp~~rqlV 490 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT---------YQESQL--------PALPSRVPPVARQLV 490 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh---------hhhhhC--------CCCcccCChHHHHHH
Confidence 1 35899999999999999999999875543222211 011111 122455667788899
Q ss_pred hhhcccCCCCCCCHHHHHHH
Q 001384 1060 VRCTAEAPNARPNVKEVLAM 1079 (1088)
Q Consensus 1060 ~~cl~~dP~~RPs~~eil~~ 1079 (1088)
...+++||.+|++..-....
T Consensus 491 ~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 491 FDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred HHHhcCCccccCCccHHHhH
Confidence 99999999999987654443
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=1.5e-20 Score=175.67 Aligned_cols=179 Identities=28% Similarity=0.496 Sum_probs=128.2
Q ss_pred ccCCcCcceeeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCC
Q 001384 385 ISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLL 464 (1088)
Q Consensus 385 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 464 (1088)
+.++..++.|.|++|+++ .+|..+..+.+|+.|++++|+++ .+|.++..+++|+.|+++-|++. .+|..||.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 335667788888888888 77778888889999999999998 78889999999999999999998 7899999999999
Q ss_pred eEEccCCcCcc-CCCchhhccCCCCCccccccccCCcccccCCccccccccccCCCCCCCcceeeehhccccchhhhhcc
Q 001384 465 WLNLSNNKLSG-NIPPEVMTIGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLL 543 (1088)
Q Consensus 465 ~L~L~~N~l~g-~ip~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 543 (1088)
+|||..|++.. .+|..++.+
T Consensus 106 vldltynnl~e~~lpgnff~m----------------------------------------------------------- 126 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYM----------------------------------------------------------- 126 (264)
T ss_pred hhhccccccccccCCcchhHH-----------------------------------------------------------
Confidence 99999998862 122211111
Q ss_pred cCCcccccccCCCcccceeeeceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCccceEEEccCCcccc
Q 001384 544 KGTGIFPVCLPGLASRTFQITGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLIVLNLTRNNFSG 623 (1088)
Q Consensus 544 ~~~~~~~~~l~~~~~~~~~~l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~l~~l~l~~N~l~~ 623 (1088)
..++.|+|+.|.|. .+|+++|++++|+.|.+..|.+-
T Consensus 127 ------------------~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll------------------------ 163 (264)
T KOG0617|consen 127 ------------------TTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL------------------------ 163 (264)
T ss_pred ------------------HHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh------------------------
Confidence 01223455555555 56666666666555555555544
Q ss_pred cCCccccCCccCcEEEccccccCCcCCccccccccc---ceeeccCCCC
Q 001384 624 EIPSEFGNIKCLQNLDLSYNNFSGPFPASFNNLTEL---SKLNISYNPL 669 (1088)
Q Consensus 624 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L---~~l~l~~N~l 669 (1088)
.+|.+++.|++|++|.+.+|+++ .+|.+++++.-. +.+.+..|||
T Consensus 164 ~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPw 211 (264)
T KOG0617|consen 164 SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPW 211 (264)
T ss_pred hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCC
Confidence 67888888888888888888887 677777766422 3445566666
No 439
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=5e-18 Score=180.96 Aligned_cols=231 Identities=23% Similarity=0.324 Sum_probs=144.1
Q ss_pred CCccceecccCceEEEEEEeC-CCcEEEEEEccccCcc---chHHHHHHHHHHhCCCCCCC-------CCceeEEeeEEe
Q 001384 807 FSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLE---GEREFRAEMEVLSGNGFGWP-------HPNLVTLYGWCL 875 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~~l~-------h~niv~l~~~~~ 875 (1088)
+...+.||.|+++.||.+.+. +++++|||++...... ..+++++|.-...... ..+ |-.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~-~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFP-GVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGST-T--SHHHHHHHH-B---SEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhc-cCCCHHHHHHhceEEeeeEEEE
Confidence 445688999999999999987 5899999998754322 2245566554443311 000 112222222111
Q ss_pred ---------cC---Ce-----EEEEEEecCCCCHHHHHh---hcCC----CCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 001384 876 ---------DG---SE-----KILVYEYMEGGSLEDIIS---DRTR----LTWRRRLDIAIDVARALVFLHHECYPPIVH 931 (1088)
Q Consensus 876 ---------~~---~~-----~~lv~e~~~~gsL~~~l~---~~~~----l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH 931 (1088)
.. .. .+++|+-+.+ +|.+++. .... +....+..+..|+++.+++||+. |+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 11 12 2577888854 8888764 2221 33444566779999999999999 9999
Q ss_pred cCCCCCCEEEcCCCCEEEeecccceeecCCCCcccccccccccccCccccCC--------CCCCcchhHHHHHHHHHHHH
Q 001384 932 RDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQT--------WQATTKGDVYSFGVLAMELA 1003 (1088)
Q Consensus 932 ~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~~l~ell 1003 (1088)
+||+|+|++++.+|.+.++||+.....+. .... ...+..|.+||.... -.++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~--~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT--RYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE--EEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc--eeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 99999999999999999999988765432 1111 334578999996533 35788999999999999999
Q ss_pred hCCcCCCCCchh-HHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCC
Q 001384 1004 TGRRALEGGEEC-LVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNAR 1070 (1088)
Q Consensus 1004 tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1070 (1088)
+|+.||...... ..+| ....+ . +.++.+..+|..+++++|.+|
T Consensus 245 C~~lPf~~~~~~~~~~~-------------------~f~~C----~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW-------------------DFSRC----R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG-------------------GGTTS----S----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc-------------------cchhc----C-CcCHHHHHHHHHHccCCcccC
Confidence 999999865331 1111 11111 2 556778889999999999988
No 440
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=5e-20 Score=172.10 Aligned_cols=185 Identities=31% Similarity=0.488 Sum_probs=133.9
Q ss_pred cCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhhhcccccce
Q 001384 265 SNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVKI 344 (1088)
Q Consensus 265 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 344 (1088)
.++.+.+.|.|++|+++ .+|+.+..+.+|+.|++++|++.. +|.++..+++|+.|+++-|++. ..
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~l------------ 94 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-IL------------ 94 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cC------------
Confidence 34555666666666666 566666666666666666666654 5666667777777776666654 22
Q ss_pred eecCcCcccCCCCCccccCCCCcCEEEccCCccC-CCCCccccCCcCcceeeccccccCCcCCcccCCCCCCcEEEccCC
Q 001384 345 LALHSNSYIDGMNSSGILKLPNISRLDLSHNNFT-GPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFN 423 (1088)
Q Consensus 345 L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 423 (1088)
+.+|+.+|.|+.|||++|++. ..+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+.+|
T Consensus 95 -------------prgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 95 -------------PRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred -------------ccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccC
Confidence 233444555555555555553 367788888899999999999998 88889999999999999999
Q ss_pred cCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCC---CeEEccCCcCccCCCch
Q 001384 424 ELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSL---LWLNLSNNKLSGNIPPE 480 (1088)
Q Consensus 424 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L---~~L~L~~N~l~g~ip~~ 480 (1088)
.+- .+|..++.++.|++|++.+|+++ .+|++++++.-+ +++.+.+|++...|-+.
T Consensus 161 dll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~pIaeQ 218 (264)
T KOG0617|consen 161 DLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPWVNPIAEQ 218 (264)
T ss_pred chh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCCCChHHHH
Confidence 988 79999999999999999999998 788888876432 55677788876554443
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=5.2e-17 Score=168.18 Aligned_cols=140 Identities=19% Similarity=0.237 Sum_probs=107.6
Q ss_pred CccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCC-CCCCCceeEEeeEEecCC---e-EEE
Q 001384 808 SEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGF-GWPHPNLVTLYGWCLDGS---E-KIL 882 (1088)
Q Consensus 808 ~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~-~l~h~niv~l~~~~~~~~---~-~~l 882 (1088)
.-.+.||+|+||.||. +.+....+||++........+++.+|+++++.+.. ...||||+++++++.++. . +.+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3457899999999996 44333347998876544556789999999987421 126899999999998864 3 337
Q ss_pred EEEe--cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCCEEEcC----CCCEEEeecccc
Q 001384 883 VYEY--MEGGSLEDIISDRTRLTWRRRLDIAIDVARAL-VFLHHECYPPIVHRDVKASNVLLDK----EGKALVTDFGLA 955 (1088)
Q Consensus 883 v~e~--~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L-~yLH~~~~~~ivH~DLkp~NIll~~----~~~~kl~Dfg~a 955 (1088)
|+|| +.+|+|.+++++. .+++. ..++.|++.++ +|||++ +||||||||+||+++. ++.++|+||+.+
T Consensus 83 I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 8999 5579999999764 46655 35678888777 999999 9999999999999974 347999994433
No 442
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=4e-17 Score=184.90 Aligned_cols=212 Identities=30% Similarity=0.429 Sum_probs=161.1
Q ss_pred CCCCceeEEeeEEecCCeEEEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe-EecCCCCCCE
Q 001384 862 WPHPNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISD-RTRLTWRRRLDIAIDVARALVFLHHECYPPI-VHRDVKASNV 939 (1088)
Q Consensus 862 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~i-vH~DLkp~NI 939 (1088)
+.|.|+.+++|.+.++...+.|.+||..|+|.|.+.. .-++++.-...+.++|+.||+|+|.. +| .|+.++++|+
T Consensus 4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKSSNC 80 (484)
T ss_pred cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeeccccc
Confidence 6899999999999999999999999999999999977 44689999999999999999999998 44 9999999999
Q ss_pred EEcCCCCEEEeecccceeecCC-CCcccccccccccccCccccCCC-------CCCcchhHHHHHHHHHHHHhCCcCCCC
Q 001384 940 LLDKEGKALVTDFGLARVVSAG-DSHVSTTIAGTVGYVAPEYGQTW-------QATTKGDVYSFGVLAMELATGRRALEG 1011 (1088)
Q Consensus 940 ll~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslG~~l~elltg~~p~~~ 1011 (1088)
++|..+.+|++|||+....... +........-..-|.|||.+... ..+.+.||||||++++|+++.+.||..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 9999999999999998766421 11112222345679999987653 146779999999999999999999986
Q ss_pred Cch--hHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhhCCC
Q 001384 1012 GEE--CLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKILPH 1086 (1088)
Q Consensus 1012 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 1086 (1088)
... ...+...+... .......+.+.. ..+...++..++.+||..+|.+||+++.|-..++.+.+.
T Consensus 161 ~~~~~~~~eii~~~~~-----~~~~~~rP~i~~-----~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 161 RNLVEDPDEIILRVKK-----GGSNPFRPSIEL-----LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccCChHHHHHHHHh-----cCCCCcCcchhh-----hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 432 21222222221 011111111100 012333688899999999999999999999999887653
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=5.3e-19 Score=200.02 Aligned_cols=277 Identities=25% Similarity=0.239 Sum_probs=132.6
Q ss_pred EEeccCccCC-CCCCccccCCCCCcEEEccCccccccccccCcccceecccCcccccccccccccCCCccCEEEcCCCcc
Q 001384 178 VANLSLNNLT-GRIDTCFDGCLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEF 256 (1088)
Q Consensus 178 ~L~L~~n~l~-~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 256 (1088)
.|+|..+.++ ......+..+.+|+.|+++++.+++.....+ ...+...+++++|+++++.+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i------------------~~~l~~~~~l~~l~l~~~~~ 63 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKAL------------------ASALRPQPSLKELCLSLNET 63 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHH------------------HHHHhhCCCceEEecccccc
Confidence 3566667776 3344555666677777777777654211110 11122333455555555544
Q ss_pred c------ccCcccccCCCCCcEEEccCccccCCCccccCCCCC---CCEEeCCCCcCCc----cCcccccCC-CCCcEEE
Q 001384 257 I------GDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISG---LEALFLGKNNFLS----VIPESLLNL-SKLEVLD 322 (1088)
Q Consensus 257 ~------~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~l~~l-~~L~~L~ 322 (1088)
. ..++..+.++++|+.|++++|.+.+..+..+..+.+ |++|++++|++.+ .+...+..+ ++|+.|+
T Consensus 64 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~ 143 (319)
T cd00116 64 GRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLV 143 (319)
T ss_pred CCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEE
Confidence 3 122344555566666666666665444444444333 6666666666552 222334444 5666666
Q ss_pred cCCCcCCCchh----HhhhcccccceeecCcCcccCCCC---CccccCCCCcCEEEccCCccCCCC----CccccCCcCc
Q 001384 323 LSSNNFGGEVQ----KIFGRFTQVKILALHSNSYIDGMN---SSGILKLPNISRLDLSHNNFTGPL----PVEISQMRSL 391 (1088)
Q Consensus 323 L~~N~l~~~~~----~~~~~l~~L~~L~L~~n~~~~~~~---~~~~~~l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L 391 (1088)
+++|.+++... ..+..+++|+.|++++|.+.+... ...+..+++|+.|+|++|.+++.. +..+..+++|
T Consensus 144 L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L 223 (319)
T cd00116 144 LGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSL 223 (319)
T ss_pred cCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCC
Confidence 66666664322 223333444444444444322110 111223345566666665554321 2233445556
Q ss_pred ceeeccccccCCcCCcccC-----CCCCCcEEEccCCcCCC----CCCccccCCCCCcEEEccccccccC----CCcccc
Q 001384 392 KFLILAHNRFNGSIPAVYG-----NMPNLQTLDLSFNELTG----PIPPSIGNLTSLLWLMLANNSLSGE----IPGEIG 458 (1088)
Q Consensus 392 ~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~ 458 (1088)
++|++++|.+++..+..+. ..+.|+.|++++|.+++ .+...+..+++|+++++++|.++.. +...+.
T Consensus 224 ~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~ 303 (319)
T cd00116 224 EVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLL 303 (319)
T ss_pred CEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHh
Confidence 6666666655532111111 12456666666665541 2233344445566666666665532 222333
Q ss_pred CC-CCCCeEEccCCc
Q 001384 459 NC-TSLLWLNLSNNK 472 (1088)
Q Consensus 459 ~l-~~L~~L~L~~N~ 472 (1088)
.. +.|++|++.+|+
T Consensus 304 ~~~~~~~~~~~~~~~ 318 (319)
T cd00116 304 EPGNELESLWVKDDS 318 (319)
T ss_pred hcCCchhhcccCCCC
Confidence 33 455555555554
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=1.3e-18 Score=196.88 Aligned_cols=252 Identities=21% Similarity=0.244 Sum_probs=189.5
Q ss_pred cccCcccccccccccccCCCccCEEEcCCCcccc----cCcccccCCCCCcEEEccCccccC------CCccccCCCCCC
Q 001384 225 SVSENVLSGVVSSSVFKENCSLEIFDLSENEFIG----DFPGEVSNCRNLVVLNLFGNNFSG------PIPAEIGSISGL 294 (1088)
Q Consensus 225 ~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~L 294 (1088)
+|..+.+++.-....|..+.+|++|+++++.++. .++..+...++|++|+++++.+.+ .++..+..+++|
T Consensus 4 ~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L 83 (319)
T cd00116 4 SLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGL 83 (319)
T ss_pred ccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCce
Confidence 3444444433334455666678899999988753 356677788999999999998872 234567788999
Q ss_pred CEEeCCCCcCCccCcccccCCCC---CcEEEcCCCcCCCc----hhHhhhcc-cccceeecCcCcccCCC---CCccccC
Q 001384 295 EALFLGKNNFLSVIPESLLNLSK---LEVLDLSSNNFGGE----VQKIFGRF-TQVKILALHSNSYIDGM---NSSGILK 363 (1088)
Q Consensus 295 ~~L~L~~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~~~----~~~~~~~l-~~L~~L~L~~n~~~~~~---~~~~~~~ 363 (1088)
+.|++++|.+.+..+..+..+.+ |++|++++|++++. +...+..+ ++|+.|++++|.+.... ....+..
T Consensus 84 ~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~ 163 (319)
T cd00116 84 QELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRA 163 (319)
T ss_pred eEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHh
Confidence 99999999998777777766665 99999999999843 33445667 89999999999876321 2234556
Q ss_pred CCCcCEEEccCCccCCC----CCccccCCcCcceeeccccccCCc----CCcccCCCCCCcEEEccCCcCCCCCCcccc-
Q 001384 364 LPNISRLDLSHNNFTGP----LPVEISQMRSLKFLILAHNRFNGS----IPAVYGNMPNLQTLDLSFNELTGPIPPSIG- 434 (1088)
Q Consensus 364 l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~- 434 (1088)
+++|++|++++|.+++. ++..+..+++|+.|++++|.+++. ++..+..+++|++|++++|++++.....+.
T Consensus 164 ~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~ 243 (319)
T cd00116 164 NRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALAS 243 (319)
T ss_pred CCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHH
Confidence 78999999999999853 333455667999999999999753 345567789999999999999863333332
Q ss_pred ----CCCCCcEEEccccccc----cCCCccccCCCCCCeEEccCCcCccC
Q 001384 435 ----NLTSLLWLMLANNSLS----GEIPGEIGNCTSLLWLNLSNNKLSGN 476 (1088)
Q Consensus 435 ----~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~N~l~g~ 476 (1088)
..+.|++|++++|.++ ..+...+..+++|+++++++|.++..
T Consensus 244 ~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 244 ALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 2479999999999997 23455677779999999999999843
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=1.6e-16 Score=168.98 Aligned_cols=144 Identities=21% Similarity=0.231 Sum_probs=111.6
Q ss_pred CCCCccceecccCceEEEEEE--eCCCcEEEEEEccccCcc------------------------chHHHHHHHHHHhCC
Q 001384 805 GKFSEDRIIGKGGFGTVYRGV--LPDGREVAVKKLQREGLE------------------------GEREFRAEMEVLSGN 858 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~~ 858 (1088)
.-|++.+.||+|+||.||+|. ..+|+.||+|+++..... ....+..|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999998 458999999998754211 012356788888764
Q ss_pred CCCCCCCceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCC
Q 001384 859 GFGWPHPNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPP-IVHRDVKAS 937 (1088)
Q Consensus 859 ~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~-ivH~DLkp~ 937 (1088)
.. .+..+.+++++ ...++||||++++++..+..........++..++.|++.+++|||+. + |+||||||+
T Consensus 108 ~~--~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~ 178 (237)
T smart00090 108 YE--AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEY 178 (237)
T ss_pred Hh--cCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChh
Confidence 31 12333444443 23489999999988877654445567777889999999999999999 8 999999999
Q ss_pred CEEEcCCCCEEEeecccceee
Q 001384 938 NVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 938 NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
||+++ ++.++++|||.+...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 889999999998754
No 446
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66 E-value=1.5e-16 Score=187.45 Aligned_cols=212 Identities=21% Similarity=0.296 Sum_probs=147.2
Q ss_pred cCCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
..+|+.++.|-.|+||.||.++++ ..+.+|.| +.+.. -+.+- ++.. -..|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~-----lilRn--ilt~----a~npfvv-------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN-----LILRN--ILTF----AGNPFVV-------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccc-----hhhhc--cccc----cCCccee--------------
Confidence 357888999999999999999987 46678884 33321 11110 1111 1233333
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCC-
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAG- 961 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~- 961 (1088)
|+-.+.++.-++++... +.+++|+|+. +|+|||+||+|.+|+.-|++|++|||++++-...
T Consensus 136 -------gDc~tllk~~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred -------chhhhhcccCCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 45556666555555443 7899999999 9999999999999999999999999987642110
Q ss_pred -----CC--------cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchh--HHHHHHhhhcc
Q 001384 962 -----DS--------HVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEEC--LVEWGRRVMGY 1026 (1088)
Q Consensus 962 -----~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~ 1026 (1088)
+. .....++||+.|+|||++....|...+|+|++|+++||++-|..||.+..+. +.........+
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w 277 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW 277 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc
Confidence 00 1123568999999999999999999999999999999999999999987441 21221111111
Q ss_pred CCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHH
Q 001384 1027 GRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVL 1077 (1088)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1077 (1088)
.. . ......++.+++.+.++..|..|--....+
T Consensus 278 pE----~--------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~ 310 (1205)
T KOG0606|consen 278 PE----E--------------DEALPPEAQDLIEQLLRQNPLCRLGTGGAL 310 (1205)
T ss_pred cc----c--------------CcCCCHHHHHHHHHHHHhChHhhcccchhh
Confidence 10 0 112234677778899999999998544433
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.64 E-value=1.3e-15 Score=161.02 Aligned_cols=134 Identities=27% Similarity=0.439 Sum_probs=111.2
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEccccCccc--------hHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 811 RIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG--------EREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
+.||+|++|.||+|.. .|..|++|+........ ...+.+|++++.. +.|+++.....++......++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~----l~~~~i~~p~~~~~~~~~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSR----ARKAGVNVPAVYFVDPENFII 76 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCeEEEEeCCCCEE
Confidence 5799999999999987 67889999866432211 2356778888876 568887766666667778899
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
||||++|++|.+++..... ++..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 77 v~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999999999865432 8889999999999999999 999999999999999 88999999998864
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=1e-15 Score=159.61 Aligned_cols=145 Identities=21% Similarity=0.263 Sum_probs=110.4
Q ss_pred HHHHHcCCCCccceecccCceEEEEEEeCCCcEEEEEEccccCcc----------------------chHHHHHHHHHHh
Q 001384 799 DILKATGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLE----------------------GEREFRAEMEVLS 856 (1088)
Q Consensus 799 ~~~~~~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 856 (1088)
++.+....|.+.+.||+|+||.||+|..++|+.||||++...... .......|+..+.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344444458888999999999999999888999999987643210 0113556777776
Q ss_pred CCCCCCCCC--ceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 001384 857 GNGFGWPHP--NLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDV 934 (1088)
Q Consensus 857 ~~~~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DL 934 (1088)
. +.|+ .+.+.++. ...++||||++|++|.+.... .....++.+++.++.++|+. +|+||||
T Consensus 89 ~----l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 89 A----LYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred H----HHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 5 3455 34444432 345899999999999876431 34567899999999999998 9999999
Q ss_pred CCCCEEEcCCCCEEEeecccceeecC
Q 001384 935 KASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 935 kp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
||+||++++++.++|+|||++.....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCCC
Confidence 99999999999999999999976543
No 449
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.63 E-value=7.1e-17 Score=178.54 Aligned_cols=189 Identities=21% Similarity=0.252 Sum_probs=134.3
Q ss_pred CCccceecccCceEEEEEEeCC----CcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEe------eEEe-
Q 001384 807 FSEDRIIGKGGFGTVYRGVLPD----GREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLY------GWCL- 875 (1088)
Q Consensus 807 ~~~~~~LG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~------~~~~- 875 (1088)
..+.+..+..+++.++..+... ...++.+....+....-....+++-.+... .+|+..+..- ..+.
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~---~~~~~s~~~d~~~s~~~~~~~ 322 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDS---SHSNRSILEDLRPSLFESSKR 322 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheecc---ccCCcccccCCCCchhhhccc
Confidence 3445566777777777665432 233444544444312222223333333221 2344433211 0111
Q ss_pred ----cCCeEEEEEEecCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEE
Q 001384 876 ----DGSEKILVYEYMEGGSLEDIISDRT---RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKAL 948 (1088)
Q Consensus 876 ----~~~~~~lv~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~k 948 (1088)
.....|+.|++|+-.+|.+|+.++. ..++.....++.|++.|++| + +.+|+|+||.||+...+..+|
T Consensus 323 ~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~k 396 (516)
T KOG1033|consen 323 NKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLK 396 (516)
T ss_pred cccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhh
Confidence 1235689999999999999997544 46788889999999999999 5 899999999999999999999
Q ss_pred EeecccceeecCCC-----CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHh
Q 001384 949 VTDFGLARVVSAGD-----SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELAT 1004 (1088)
Q Consensus 949 l~Dfg~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ellt 1004 (1088)
|.|||+........ ....+...||..||+||.+.+..|+.|+||||+|++++|++.
T Consensus 397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99999988766544 233456789999999999999999999999999999999986
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.61 E-value=2.5e-15 Score=157.26 Aligned_cols=131 Identities=27% Similarity=0.449 Sum_probs=103.7
Q ss_pred eecccCceEEEEEEeCCCcEEEEEEccccCcc--------chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEE
Q 001384 812 IIGKGGFGTVYRGVLPDGREVAVKKLQREGLE--------GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILV 883 (1088)
Q Consensus 812 ~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv 883 (1088)
.||+|+||.||+|.+ ++..|++|+....... ...++.+|++++.. +.|+++.....++......++|
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~----l~~~~i~~p~~~~~~~~~~~lv 75 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSR----ARKAGVNTPVVYDVDPDNKTIV 75 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHH----HHHCCCCCCEEEEEECCCCEEE
Confidence 489999999999996 5788999986543211 12456778888876 4566554444444556667899
Q ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceee
Q 001384 884 YEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVV 958 (1088)
Q Consensus 884 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~ 958 (1088)
|||++|++|.+++..... .++.+++.+|.++|+. +++|||++|.||+++ ++.++++|||.+...
T Consensus 76 ~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 76 MEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999999998755321 7899999999999999 999999999999999 899999999988653
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.60 E-value=4.1e-15 Score=178.94 Aligned_cols=137 Identities=26% Similarity=0.396 Sum_probs=110.3
Q ss_pred cCCCCccceecccCceEEEEEEeCCCcEEEEEEc-cccCc-------cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe
Q 001384 804 TGKFSEDRIIGKGGFGTVYRGVLPDGREVAVKKL-QREGL-------EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL 875 (1088)
Q Consensus 804 ~~~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~-------~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~ 875 (1088)
...|...+.||+|+||+||+|.+... .+++|+. .+... .....+.+|++++.. ++|++++..+.++.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~----l~~~~i~~p~~~~~ 406 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSE----ARRAGVPTPVIYDV 406 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHh----hcccCCCeeEEEEE
Confidence 34456679999999999999997544 3444432 22111 112457889999987 67999888877777
Q ss_pred cCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccc
Q 001384 876 DGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLA 955 (1088)
Q Consensus 876 ~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a 955 (1088)
.+...++||||+++++|.+++. ....++.|++++++|||+. +++||||||+||++ +++.++|+|||++
T Consensus 407 ~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 407 DPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred eCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 7777899999999999999885 4578999999999999999 99999999999999 6789999999998
Q ss_pred ee
Q 001384 956 RV 957 (1088)
Q Consensus 956 ~~ 957 (1088)
+.
T Consensus 475 ~~ 476 (535)
T PRK09605 475 KY 476 (535)
T ss_pred cc
Confidence 65
No 452
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.55 E-value=2.3e-16 Score=173.89 Aligned_cols=189 Identities=30% Similarity=0.466 Sum_probs=138.6
Q ss_pred ceeeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCC
Q 001384 392 KFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNN 471 (1088)
Q Consensus 392 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 471 (1088)
...||+.|++. ++|..+..+-.|+.+.|++|.+. .+|+.++++..|++|||+.|+++ .+|..++.|+ |+.|-+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 45566666666 66666666666666666666666 66777777777777777777776 6666666664 677777777
Q ss_pred cCccCCCchhhccCCCCCccccccccCCcccccCCccccccccccCCCCCCCcceeeehhccccchhhhhcccCCccccc
Q 001384 472 KLSGNIPPEVMTIGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPV 551 (1088)
Q Consensus 472 ~l~g~ip~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 551 (1088)
+++ .+|++++...
T Consensus 154 kl~-~lp~~ig~~~------------------------------------------------------------------ 166 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLP------------------------------------------------------------------ 166 (722)
T ss_pred ccc-cCCcccccch------------------------------------------------------------------
Confidence 776 5666554111
Q ss_pred ccCCCcccceeeeceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCccceEEEccCCcccccCCccccC
Q 001384 552 CLPGLASRTFQITGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQLPLIVLNLTRNNFSGEIPSEFGN 631 (1088)
Q Consensus 552 ~l~~~~~~~~~~l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~l~~l~l~~N~l~~~~p~~~~~ 631 (1088)
.+..|+.+.|++. .+|..++.+.+|+.|.+..|++. .+|+++..|+|..||+|.|+++ .||-.|.+
T Consensus 167 -----------tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~lDfScNkis-~iPv~fr~ 232 (722)
T KOG0532|consen 167 -----------TLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIRLDFSCNKIS-YLPVDFRK 232 (722)
T ss_pred -----------hHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceeeeecccCcee-ecchhhhh
Confidence 1123566666666 67888888889999999999998 8888889999999999999999 99999999
Q ss_pred CccCcEEEccccccCCcCCcccccccc---cceeeccC
Q 001384 632 IKCLQNLDLSYNNFSGPFPASFNNLTE---LSKLNISY 666 (1088)
Q Consensus 632 l~~L~~L~l~~N~l~g~~p~~~~~l~~---L~~l~l~~ 666 (1088)
|+.|++|-|.+|.|. ..|..+...-+ .++|+.+-
T Consensus 233 m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA 269 (722)
T KOG0532|consen 233 MRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQA 269 (722)
T ss_pred hhhheeeeeccCCCC-CChHHHHhccceeeeeeecchh
Confidence 999999999999998 67877655444 34444443
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.53 E-value=3.7e-14 Score=146.71 Aligned_cols=138 Identities=22% Similarity=0.274 Sum_probs=96.1
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEccccCccch--HHH----------------------HHHHHHHhCCCCCCCCC
Q 001384 810 DRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGE--REF----------------------RAEMEVLSGNGFGWPHP 865 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~~----------------------~~E~~~l~~~~~~l~h~ 865 (1088)
.+.||+|+||+||+|.+.+++.||||++........ ..+ ..|.+.+.+.. -.+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~~ 79 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY--EAGV 79 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH--HcCC
Confidence 467999999999999988899999999875422111 111 23444443321 0112
Q ss_pred ceeEEeeEEecCCeEEEEEEecCCCCHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCEEEcC
Q 001384 866 NLVTLYGWCLDGSEKILVYEYMEGGSLED-IISDRTRLTWRRRLDIAIDVARALVFLHH-ECYPPIVHRDVKASNVLLDK 943 (1088)
Q Consensus 866 niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~~~~ivH~DLkp~NIll~~ 943 (1088)
.+.+.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++|. . +|+||||||+||+++
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~- 149 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD- 149 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-
Confidence 23344432 24589999999954321 111111 11 6778999999999999999 7 999999999999999
Q ss_pred CCCEEEeecccceeec
Q 001384 944 EGKALVTDFGLARVVS 959 (1088)
Q Consensus 944 ~~~~kl~Dfg~a~~~~ 959 (1088)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 9999999999997654
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.53 E-value=3.4e-16 Score=172.52 Aligned_cols=191 Identities=32% Similarity=0.499 Sum_probs=165.4
Q ss_pred eeccccccCCcCCccc--CCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCC
Q 001384 394 LILAHNRFNGSIPAVY--GNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNN 471 (1088)
Q Consensus 394 L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 471 (1088)
|.|++-++. ..|..- ..+.--...||+.|++. .+|..++.+..|+.+.|..|.+. .+|..++++..|++|||+.|
T Consensus 55 l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 55 LLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred cccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 445555554 333211 23455667899999999 89999999999999999999998 89999999999999999999
Q ss_pred cCccCCCchhhccCCCCCccccccccCCcccccCCccccccccccCCCCCCCcceeeehhccccchhhhhcccCCccccc
Q 001384 472 KLSGNIPPEVMTIGRNARPTFEANQRNGERTIAGSSECLSMKRWIPADYPPFSFVYTILTRKSCRSLWDRLLKGTGIFPV 551 (1088)
Q Consensus 472 ~l~g~ip~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 551 (1088)
+++ .+|..++.++
T Consensus 132 qlS-~lp~~lC~lp------------------------------------------------------------------ 144 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP------------------------------------------------------------------ 144 (722)
T ss_pred hhh-cCChhhhcCc------------------------------------------------------------------
Confidence 999 7888775431
Q ss_pred ccCCCcccceeeeceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCc-cceEEEccCCcccccCCcccc
Q 001384 552 CLPGLASRTFQITGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQL-PLIVLNLTRNNFSGEIPSEFG 630 (1088)
Q Consensus 552 ~l~~~~~~~~~~l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-~l~~l~l~~N~l~~~~p~~~~ 630 (1088)
|..|-+++|+++ .+|+.|+.++.|..||.+.|++. .+|+.++.+ +|+.|++.+|++. .+|++++
T Consensus 145 ------------Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~ 209 (722)
T KOG0532|consen 145 ------------LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC 209 (722)
T ss_pred ------------ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh
Confidence 245889999999 89999999999999999999999 788888888 8999999999999 8999999
Q ss_pred CCccCcEEEccccccCCcCCcccccccccceeeccCCCCcc
Q 001384 631 NIKCLQNLDLSYNNFSGPFPASFNNLTELSKLNISYNPLVS 671 (1088)
Q Consensus 631 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~~ 671 (1088)
.| .|..||+|.|+++ .||.+|.+|+.|++|-|.+|||.+
T Consensus 210 ~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 210 SL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred CC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC
Confidence 55 5899999999999 899999999999999999999964
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=2.8e-15 Score=178.86 Aligned_cols=253 Identities=21% Similarity=0.231 Sum_probs=186.7
Q ss_pred CCCCccceecccCceEEEEEEeCC--CcEEEEEEccccC--ccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD--GREVAVKKLQREG--LEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
..|...+.||+|+|+.|-.+.... ...+|+|.+.... .........|..+-.... .|+|++++++...+....
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s---~h~n~~~~~~~~~~~~~~ 96 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS---KHSNTVHMIEPSSSPRSY 96 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc---ccccccccCCccCCCccc
Confidence 356777889999999999988643 3456666665442 112233334555444322 399999999999999999
Q ss_pred EEEEEecCCCCHHHHH-hhcC-CCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCCEEEcCCC-CEEEeecccce
Q 001384 881 ILVYEYMEGGSLEDII-SDRT-RLTWRRRLDIAIDVARALVFLH-HECYPPIVHRDVKASNVLLDKEG-KALVTDFGLAR 956 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l-~~~~-~l~~~~~~~i~~qi~~~L~yLH-~~~~~~ivH~DLkp~NIll~~~~-~~kl~Dfg~a~ 956 (1088)
++++||..++++.+.+ +... ..+...+-.++.|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|.
T Consensus 97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 9999999999999988 6554 6788888999999999999999 76 999999999999999999 99999999998
Q ss_pred eecC--CCCcccccccc-cccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCC
Q 001384 957 VVSA--GDSHVSTTIAG-TVGYVAPEYGQTW-QATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPG 1032 (1088)
Q Consensus 957 ~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1088)
.+.. +........+| ++.|+|||...+. ......|+||.|+++.-+++|..|+.........+..+..
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~-------- 245 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKS-------- 245 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecc--------
Confidence 8765 22333445677 9999999987774 5567899999999999999999999865432211111110
Q ss_pred ccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHH
Q 001384 1033 RAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVL 1077 (1088)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1077 (1088)
.... ..............++..+++..+|..|.+.+++.
T Consensus 246 -----~~~~-~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 246 -----NKGR-FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred -----cccc-cccCccccCChhhhhcccccccCCchhcccccccc
Confidence 0000 00011222334566777789999999999988764
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.49 E-value=8.2e-14 Score=169.19 Aligned_cols=151 Identities=31% Similarity=0.437 Sum_probs=123.0
Q ss_pred CCCchhhHHHHHHHHhhcccCCCCCcccccccCCCCCCc----ccCCceeCCC--C--ceeEEecccccccccccccccc
Q 001384 29 GDSLETDREVLSNLRSFLENNNPVNEGHYMQWNQSSSPC----EWPGIICSPD--K--ARVNGLNLTDWNISGDIFNNFS 100 (1088)
Q Consensus 29 ~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~sW~~~~~~C----~W~gv~C~~~--~--~~v~~L~L~~~~l~~~~~~~l~ 100 (1088)
..+.+.|.+||+++|+.+... . ..+|+. ..|| .|.||+|+.+ . .+|+.|+|+++++.|.+|..++
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~----~--~~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~ 439 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLP----L--RFGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDIS 439 (623)
T ss_pred cccCchHHHHHHHHHHhcCCc----c--cCCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHh
Confidence 445678999999999988531 1 147964 2342 6999999532 2 3699999999999999999999
Q ss_pred CCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCcc--cCCCCCCCceeecccccccccccCchhhhcccceE
Q 001384 101 ALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDL--NLSGLRSLEILDLSVNRIHGEISFSFPAICEKLVV 178 (1088)
Q Consensus 101 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~ 178 (1088)
.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|++++.. .++++++|++|+|++|++++.+|..+.....++..
T Consensus 440 ~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~ 519 (623)
T PLN03150 440 KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRAS 519 (623)
T ss_pred CCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCce
Confidence 9999999999999999999999999999999999999999754 48889999999999999998888777654445556
Q ss_pred EeccCccC
Q 001384 179 ANLSLNNL 186 (1088)
Q Consensus 179 L~L~~n~l 186 (1088)
+++.+|..
T Consensus 520 l~~~~N~~ 527 (623)
T PLN03150 520 FNFTDNAG 527 (623)
T ss_pred EEecCCcc
Confidence 66666543
No 457
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.49 E-value=1.7e-13 Score=136.32 Aligned_cols=137 Identities=19% Similarity=0.189 Sum_probs=112.7
Q ss_pred ccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecC
Q 001384 809 EDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
+.+.||+|.++.||++...+ ..+++|....... ...+..|+..+..+... ..++.+++++....+..+++|||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~--~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARK--GLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHc--CCCCCeEEEEcCCCCccEEEEEecC
Confidence 35789999999999999854 7899999876533 45788888888864310 2578888888887788999999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
++.+..+ +......++.+++.+++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 77 g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8777654 5677788999999999999996434799999999999999989999999998864
No 458
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.47 E-value=2e-13 Score=145.64 Aligned_cols=136 Identities=22% Similarity=0.323 Sum_probs=104.5
Q ss_pred cceec-ccCceEEEEEEeCCCcEEEEEEccccCc-------------cchHHHHHHHHHHhCCCCCCCCCc--eeEEeeE
Q 001384 810 DRIIG-KGGFGTVYRGVLPDGREVAVKKLQREGL-------------EGEREFRAEMEVLSGNGFGWPHPN--LVTLYGW 873 (1088)
Q Consensus 810 ~~~LG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~~~~~l~h~n--iv~l~~~ 873 (1088)
...|| .|+.|+||.+... +..+|||++..... .....+.+|++++.. +.|++ +++.+++
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~----L~~~gi~vP~pl~~ 110 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQ----LYEAGLPVPRPIAA 110 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHH----HHhCCCCCceeEee
Confidence 36788 8999999999884 77899998854211 123457789998886 45666 4666666
Q ss_pred EecC-C---eEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEE
Q 001384 874 CLDG-S---EKILVYEYMEG-GSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKAL 948 (1088)
Q Consensus 874 ~~~~-~---~~~lv~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~k 948 (1088)
...+ . ..++||||++| .+|.+++... ++++. .+.+++.++.+||+. ||+||||||+|||++.++.++
T Consensus 111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 111 RVVRHGLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred eeeecCcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 4432 2 22599999997 6999988653 45544 356899999999999 999999999999999999999
Q ss_pred Eeecccceee
Q 001384 949 VTDFGLARVV 958 (1088)
Q Consensus 949 l~Dfg~a~~~ 958 (1088)
++|||.+...
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999988764
No 459
>PLN03150 hypothetical protein; Provisional
Probab=99.43 E-value=1.6e-13 Score=166.78 Aligned_cols=106 Identities=30% Similarity=0.509 Sum_probs=74.9
Q ss_pred eceEEccCCccccccCcccccCCCccEEeccccccccCCCCcccCc-cceEEEccCCcccccCCccccCCccCcEEEccc
Q 001384 564 TGYLQLSGNQLSGELSPDIGKLQNFSMVHLGFNQFDGKLPSQFDQL-PLIVLNLTRNNFSGEIPSEFGNIKCLQNLDLSY 642 (1088)
Q Consensus 564 l~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l-~l~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 642 (1088)
+..|+|++|.++|.+|..++++++|+.|+|++|+|+|.+|..++.+ .|+.|+|++|+++|.+|+.+++|++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 4567788888888888888888888888887777777777777766 577777777777777777777777777777777
Q ss_pred cccCCcCCcccccc-cccceeeccCCCC
Q 001384 643 NNFSGPFPASFNNL-TELSKLNISYNPL 669 (1088)
Q Consensus 643 N~l~g~~p~~~~~l-~~L~~l~l~~N~l 669 (1088)
|+++|.+|..++.+ .++..+++++|+.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCcc
Confidence 77777777766543 2344444444443
No 460
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=2.7e-12 Score=149.02 Aligned_cols=144 Identities=28% Similarity=0.372 Sum_probs=101.2
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEccccCccc----------------------------------------hHHHH
Q 001384 810 DRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEG----------------------------------------EREFR 849 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~ 849 (1088)
.+.||+|++|.||+|++++|+.||||+.+...... +-++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36899999999999999999999999986431000 01234
Q ss_pred HHHHHHhCCCCCCCCCceeEEeeEEe-cCCeEEEEEEecCCCCHHHHHhhc-CCCCHHHHHHHHHHHHH-HHHHHHhcCC
Q 001384 850 AEMEVLSGNGFGWPHPNLVTLYGWCL-DGSEKILVYEYMEGGSLEDIISDR-TRLTWRRRLDIAIDVAR-ALVFLHHECY 926 (1088)
Q Consensus 850 ~E~~~l~~~~~~l~h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qi~~-~L~yLH~~~~ 926 (1088)
.|.+.+.+....++|.+-+.+-.++. .....++||||++|++|.++.... ... .+..++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~-- 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD-- 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC--
Confidence 44444433322233333333333332 244579999999999999876532 112 23456676666 46788988
Q ss_pred CCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 927 PPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 927 ~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
|++|+|++|.||+++.++.++++|||++..+.
T Consensus 277 -g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 -GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred -CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999998765
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.32 E-value=1.9e-12 Score=150.74 Aligned_cols=105 Identities=40% Similarity=0.576 Sum_probs=50.8
Q ss_pred CcCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEcc
Q 001384 366 NISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLA 445 (1088)
Q Consensus 366 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 445 (1088)
+|+.|++++|.+. .+|..++.+++|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|++|+++
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 3444444444444 33344445555555555555555 44443334455555555555555 444444444445555555
Q ss_pred ccccccCCCccccCCCCCCeEEccCCcCc
Q 001384 446 NNSLSGEIPGEIGNCTSLLWLNLSNNKLS 474 (1088)
Q Consensus 446 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 474 (1088)
+|.+. .++..+.+++++..+.+.+|++.
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceee
Confidence 55332 34444555555555555555544
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=2.8e-12 Score=145.64 Aligned_cols=247 Identities=23% Similarity=0.238 Sum_probs=182.9
Q ss_pred CCCccceecc--cCceEEEEEEe--C-CCcEEEEEEccccCc--cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCC
Q 001384 806 KFSEDRIIGK--GGFGTVYRGVL--P-DGREVAVKKLQREGL--EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGS 878 (1088)
Q Consensus 806 ~~~~~~~LG~--G~~g~Vy~~~~--~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~ 878 (1088)
.|...+.+|+ |.+|.||.+.. + ++..+|+|+-+.... .....=.+|+...... -.|++.++.+..+.+.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i---~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKI---DSHENPVRDSPAWEGSG 191 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccccc---CccccccccCcccccCC
Confidence 4666788999 99999999986 3 678899998554322 2222223444444333 36999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHhhcCC-CCHHHHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCCEEEcCC-CCEEEeec
Q 001384 879 EKILVYEYMEGGSLEDIISDRTR-LTWRRRLDIAIDVAR----ALVFLHHECYPPIVHRDVKASNVLLDKE-GKALVTDF 952 (1088)
Q Consensus 879 ~~~lv~e~~~~gsL~~~l~~~~~-l~~~~~~~i~~qi~~----~L~yLH~~~~~~ivH~DLkp~NIll~~~-~~~kl~Df 952 (1088)
..++-+|++. .+|.++.+.... ++...++.+..+..+ |+.++|.. +++|-|+||.||+..++ ...+++||
T Consensus 192 ~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 192 ILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred cceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9999999995 699988887665 888899999999999 99999999 99999999999999999 88999999
Q ss_pred ccceeecCCCCcc----cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCC
Q 001384 953 GLARVVSAGDSHV----STTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGR 1028 (1088)
Q Consensus 953 g~a~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1088)
|+...+...+-.. .....|...|++||..++ .++...|||++|.+..+-.+|..++.... ...|..-.
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~--~~~W~~~r----- 339 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK--NSSWSQLR----- 339 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC--CCCccccc-----
Confidence 9998877554221 122357788999999887 78899999999999999999888876531 11121110
Q ss_pred CCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1029 HGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
... ++..... .-..++...+..|++.+|..|++++++..
T Consensus 340 --~~~--ip~e~~~-------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 340 --QGY--IPLEFCE-------GGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --ccc--Cchhhhc-------CcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 000 1111110 11134444778999999999999988754
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=2.6e-12 Score=133.17 Aligned_cols=193 Identities=25% Similarity=0.393 Sum_probs=136.3
Q ss_pred CCCCceeEEeeEEecCC-----eEEEEEEecCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 001384 862 WPHPNLVTLYGWCLDGS-----EKILVYEYMEGGSLEDIISDR----TRLTWRRRLDIAIDVARALVFLHHECYPPIVHR 932 (1088)
Q Consensus 862 l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~ 932 (1088)
+.|.|+|++..|+.+.+ ...++.|||..|++..++++- ..+......+|.-||..||.|||+ |.|.|+|+
T Consensus 124 lvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Ppiihg 202 (458)
T KOG1266|consen 124 LVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPPIIHG 202 (458)
T ss_pred HHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCccccC
Confidence 46999999999987643 467899999999999999763 347888889999999999999999 58899999
Q ss_pred CCCCCCEEEcCCCCEEEeecccceeecC----CCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcC
Q 001384 933 DVKASNVLLDKEGKALVTDFGLARVVSA----GDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRA 1008 (1088)
Q Consensus 933 DLkp~NIll~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 1008 (1088)
++..+-|++..+|-+|++- +.-..+.. ........-.+-++|.|||+......+.++|||+||.+..||.-|..-
T Consensus 203 nlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq 281 (458)
T KOG1266|consen 203 NLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQ 281 (458)
T ss_pred CcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheec
Confidence 9999999999999888742 11111110 011111223456899999998888888999999999999999987765
Q ss_pred CCCCch-hHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHH
Q 001384 1009 LEGGEE-CLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1009 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1078 (1088)
-...+. ...+-.-. ....+.. . ..=..++..|++..|..||+|++.+.
T Consensus 282 ~tnseS~~~~ee~ia---------------~~i~~le----n---~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 282 STNSESKVEVEENIA---------------NVIIGLE----N---GLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred cCCCcceeehhhhhh---------------hheeecc----C---ccccCcCcccccCCCCCCcchhhhhc
Confidence 332211 11110000 0000000 0 01124667999999999999998753
No 464
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.28 E-value=3.8e-12 Score=148.30 Aligned_cols=199 Identities=38% Similarity=0.493 Sum_probs=155.8
Q ss_pred EEEcCCCcccccCcccccCCCCCcEEEccCccccCCCccccCCCC-CCCEEeCCCCcCCccCcccccCCCCCcEEEcCCC
Q 001384 248 IFDLSENEFIGDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSIS-GLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSN 326 (1088)
Q Consensus 248 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 326 (1088)
.++++.|.+.. .+..+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+.. +|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhh-hhhhhhccccccccccCCc
Confidence 46666666532 2333445577888888888888 6677777774 88888888888765 4567788888888888888
Q ss_pred cCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCcCcceeeccccccCCcCC
Q 001384 327 NFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIP 406 (1088)
Q Consensus 327 ~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 406 (1088)
+++...+.. ..+++|+.|++++|+++ .+|..+.....|++|++++|++. ..+
T Consensus 174 ~l~~l~~~~--------------------------~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~ 225 (394)
T COG4886 174 DLSDLPKLL--------------------------SNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELL 225 (394)
T ss_pred hhhhhhhhh--------------------------hhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecc
Confidence 887544321 14568888999999998 78877777777999999999755 577
Q ss_pred cccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccCCCch
Q 001384 407 AVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGNIPPE 480 (1088)
Q Consensus 407 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~ 480 (1088)
..+.++.++..+.+.+|++. .++..+++++++++|++++|+++ .++. ++.+.+|+.|++++|.++..+|..
T Consensus 226 ~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 226 SSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhhhhcccccccccCCceee-eccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhh
Confidence 78899999999999999998 56888999999999999999998 5665 899999999999999999665554
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.24 E-value=1.6e-11 Score=143.66 Aligned_cols=145 Identities=22% Similarity=0.275 Sum_probs=97.5
Q ss_pred CCCCccceecccCceEEEEEEeCC-CcEEEEEEccccCcc----------------------------------ch----
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLPD-GREVAVKKLQREGLE----------------------------------GE---- 845 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~---- 845 (1088)
..|+. +.||+|++|.||+|++++ |++||||+.+..-.. ..
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999987 999999999743100 01
Q ss_pred --HHHHHHHHHHhCCCCCCCCCceeEEeeEEec-CCeEEEEEEecCCCCHHHH--HhhcC----CCCHHHHHHHHHHHHH
Q 001384 846 --REFRAEMEVLSGNGFGWPHPNLVTLYGWCLD-GSEKILVYEYMEGGSLEDI--ISDRT----RLTWRRRLDIAIDVAR 916 (1088)
Q Consensus 846 --~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~--l~~~~----~l~~~~~~~i~~qi~~ 916 (1088)
-++..|+.-+.+....+.+...+.+-.++.+ ....++||||++|+.+.++ ++..+ .+....+..++.|+.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif- 277 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF- 277 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Confidence 1233444433332222334444443343332 4567899999999999875 33322 233344444455543
Q ss_pred HHHHHHhcCCCCeEecCCCCCCEEEcCCC----CEEEeecccceeecC
Q 001384 917 ALVFLHHECYPPIVHRDVKASNVLLDKEG----KALVTDFGLARVVSA 960 (1088)
Q Consensus 917 ~L~yLH~~~~~~ivH~DLkp~NIll~~~~----~~kl~Dfg~a~~~~~ 960 (1088)
.. |++|+|++|.||+++.++ +++++|||++..+..
T Consensus 278 ------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 ------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 35 999999999999999888 999999999987754
No 466
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.23 E-value=1.2e-10 Score=133.09 Aligned_cols=165 Identities=21% Similarity=0.261 Sum_probs=127.4
Q ss_pred CCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHH
Q 001384 827 PDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRR 906 (1088)
Q Consensus 827 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~ 906 (1088)
.++.+|.|+..+...........+-++.++. ++||+|+++++.+..+++.|+|+|.+. .|..++++.+ ...
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKt----lRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~---~~~ 105 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKT----LRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG---KEE 105 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhh----ccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH---HHH
Confidence 3688899988877644223345566666664 789999999999999999999999985 6777777643 677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcccccccccccccCccccCCCCC
Q 001384 907 RLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVSTTIAGTVGYVAPEYGQTWQA 986 (1088)
Q Consensus 907 ~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 986 (1088)
+..-+.||+.||.|||..| +++|++|.-.-|+|++.|+.||++|.++.....-.. ......--..|..|+.+....
T Consensus 106 v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc-
Confidence 7788999999999999887 899999999999999999999999998765443221 111222233566777554433
Q ss_pred CcchhHHHHHHHHHHHHhC
Q 001384 987 TTKGDVYSFGVLAMELATG 1005 (1088)
Q Consensus 987 ~~~~DvwslG~~l~elltg 1005 (1088)
-..|.|.||++++|++.|
T Consensus 182 -~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 -WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -cchhhhhHHHHHHHHhCc
Confidence 357999999999999998
No 467
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.21 E-value=1.5e-10 Score=117.66 Aligned_cols=138 Identities=20% Similarity=0.232 Sum_probs=97.8
Q ss_pred cceecccCceEEEEEEeCC-------CcEEEEEEccccCc----------------------cchHHHH----HHHHHHh
Q 001384 810 DRIIGKGGFGTVYRGVLPD-------GREVAVKKLQREGL----------------------EGEREFR----AEMEVLS 856 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~~~----~E~~~l~ 856 (1088)
...||.|..+.||.|...+ +..+|||+.+.... ...+.+. +|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998653 47999998853210 0012222 6777776
Q ss_pred CCCC-CCCCCceeEEeeEEecCCeEEEEEEecCCCCHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecC
Q 001384 857 GNGF-GWPHPNLVTLYGWCLDGSEKILVYEYMEGGSLED-IISDRTRLTWRRRLDIAIDVARALVFL-HHECYPPIVHRD 933 (1088)
Q Consensus 857 ~~~~-~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~l~~~~~~~i~~qi~~~L~yL-H~~~~~~ivH~D 933 (1088)
++.. .+..|. ++++ ...++||||+.++.+.. .+++ ..++..+...+..+++.+|.++ |.. ++||||
T Consensus 82 rl~~~Gv~vP~---pi~~----~~~~lvME~Ig~~~~~~~~Lkd-~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 82 RMQKAGIPCPE---VVVL----KKHVLVMSFIGDDQVPAPKLKD-AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHHcCCCCCe---EEEe----cCCEEEEEEcCCCCccchhhhc-cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 6442 234444 4443 45689999997754422 2322 2355667778889999999999 777 999999
Q ss_pred CCCCCEEEcCCCCEEEeecccceeec
Q 001384 934 VKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 934 Lkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
|+++||+++ ++.+.++|||.+....
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999996 5789999999987654
No 468
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.15 E-value=1.1e-10 Score=118.68 Aligned_cols=131 Identities=20% Similarity=0.146 Sum_probs=94.3
Q ss_pred cceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCc-eeEEeeEEecCCeEEEEEEecC
Q 001384 810 DRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPN-LVTLYGWCLDGSEKILVYEYME 888 (1088)
Q Consensus 810 ~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~ 888 (1088)
.+.++.|.++.||++... ++.|++|....... ....+..|++++..+. +.+ +.+++.+. ....++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~----~~~~~P~~~~~~--~~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAA----EAGIGPKLYYFD--PETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHH----HhCCCCceEEEe--CCCCeEEEEecC
Confidence 367899999999999975 77899999865531 2234567777777532 223 33444443 234579999999
Q ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 889 GGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHEC--YPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 889 ~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~--~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
|.++.+. ......++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9887653 0112346789999999999982 11259999999999998 67899999998753
No 469
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=3.8e-12 Score=133.76 Aligned_cols=237 Identities=23% Similarity=0.265 Sum_probs=142.4
Q ss_pred ceeEEeccccccccc----cccccccCCccCCeeeCCCCCCCC----CcCcc-------CCCCCCCcEEECccccccC--
Q 001384 79 ARVNGLNLTDWNISG----DIFNNFSALTQLSYLDLSRNTFSG----SIPDD-------LSSCRSLKYLNLSHNILSG-- 141 (1088)
Q Consensus 79 ~~v~~L~L~~~~l~~----~~~~~l~~l~~L~~L~Ls~n~l~~----~~p~~-------l~~l~~L~~L~Ls~n~l~~-- 141 (1088)
..++.|+|++|.+.- .+.+.+.+.++|+..++|+ -++| .+|+. +..+++|++|+||.|.+..
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 457788888887643 3456677778888888876 3333 34433 3566788888888888763
Q ss_pred ccc----CCCCCCCceeecccccccccccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCccccc-----
Q 001384 142 DLN----LSGLRSLEILDLSVNRIHGEISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRG----- 212 (1088)
Q Consensus 142 ~~~----l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~----- 212 (1088)
... +.++..|++|.|.+|.+.-.....+... |.+|. .|+. ...-++|+++...+|++..
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~a---l~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~ga~~ 176 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRA---LFELA--VNKK-------AASKPKLRVFICGRNRLENGGATA 176 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHH---HHHHH--HHhc-------cCCCcceEEEEeeccccccccHHH
Confidence 221 5567888888888887653333332221 11111 1111 2334578888888888764
Q ss_pred --cccccCcccceecccCcccccc---cccccccCCCccCEEEcCCCcccc----cCcccccCCCCCcEEEccCccccCC
Q 001384 213 --NIWNGLAQLVEFSVSENVLSGV---VSSSVFKENCSLEIFDLSENEFIG----DFPGEVSNCRNLVVLNLFGNNFSGP 283 (1088)
Q Consensus 213 --~~~~~l~~L~~L~L~~n~l~~~---~~~~~~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~ 283 (1088)
.+++..+.|+++.+..|.|... .....|..+++|++|||.+|-++. .+...+..+++|++|++++|.+...
T Consensus 177 ~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~ 256 (382)
T KOG1909|consen 177 LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENE 256 (382)
T ss_pred HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccc
Confidence 2344556667777766655421 223446667777777777777652 3345556667777777777777644
Q ss_pred Ccccc-----CCCCCCCEEeCCCCcCCcc----CcccccCCCCCcEEEcCCCcC
Q 001384 284 IPAEI-----GSISGLEALFLGKNNFLSV----IPESLLNLSKLEVLDLSSNNF 328 (1088)
Q Consensus 284 ~p~~~-----~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l 328 (1088)
...+| ...++|+.|.|.+|.++.. +...+...+.|..|+|++|.+
T Consensus 257 Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 257 GAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 33332 2356677777777766532 223344556677777777766
No 470
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.11 E-value=4.9e-11 Score=135.60 Aligned_cols=250 Identities=19% Similarity=0.111 Sum_probs=181.1
Q ss_pred HHcCCCCccceecccCceEEEEEEeC--CCcEEEEEEccccCccchHHH--HHHHHHHhCCCCCCCCCceeEEeeEEecC
Q 001384 802 KATGKFSEDRIIGKGGFGTVYRGVLP--DGREVAVKKLQREGLEGEREF--RAEMEVLSGNGFGWPHPNLVTLYGWCLDG 877 (1088)
Q Consensus 802 ~~~~~~~~~~~LG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~~~~~l~h~niv~l~~~~~~~ 877 (1088)
....+|..+..||.|.|+.|+++..+ ++..+++|.+.+.......++ ..|+.+...+ ..|.++++.+..|...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l---~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAIL---GSHLPSVGKNSSWSQL 338 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHh---hcccccCCCCCCcccc
Confidence 34568899999999999999998744 577899999887643333222 2344444332 2588888888777777
Q ss_pred CeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCC-CCEEEeecccce
Q 001384 878 SEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKE-GKALVTDFGLAR 956 (1088)
Q Consensus 878 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~-~~~kl~Dfg~a~ 956 (1088)
...|+--||++++++...+.-...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..+++|||.++
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccc
Confidence 77889999999999988775555688899999999999999999998 99999999999999886 778899999886
Q ss_pred eecCCCCccccccccccccc--CccccCCCCCCcchhHHHHHHHHHHHHhCCcCCCCCchhHHHHHHhhhccCCCCCCcc
Q 001384 957 VVSAGDSHVSTTIAGTVGYV--APEYGQTWQATTKGDVYSFGVLAMELATGRRALEGGEECLVEWGRRVMGYGRHGPGRA 1034 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1088)
.+.- .........+++ +|+......+-.+.|++|||.-+++..+|...-.... +|.....
T Consensus 416 ~~~~----~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~----~~~~i~~---------- 477 (524)
T KOG0601|consen 416 RLAF----SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV----QSLTIRS---------- 477 (524)
T ss_pred ccce----ecccccccccccccchhhccccccccccccccccccccccccCcccCcccc----cceeeec----------
Confidence 4321 111122333444 5556667788899999999999999998776544321 2211110
Q ss_pred ccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHHHHHHHHHhh
Q 001384 1035 VIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~i 1083 (1088)
...+........+..+.+.+..+|+..||.+.+.....+..
T Consensus 478 --------~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 478 --------GDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred --------ccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 00011122225677778899999999999999887655443
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=1e-11 Score=133.84 Aligned_cols=187 Identities=25% Similarity=0.271 Sum_probs=92.0
Q ss_pred cccCCCccCEEEcCCCcccc--cCcccccCCCCCcEEEccCccccCCCcccc-CCCCCCCEEeCCCCcCCccCcccccCC
Q 001384 239 VFKENCSLEIFDLSENEFIG--DFPGEVSNCRNLVVLNLFGNNFSGPIPAEI-GSISGLEALFLGKNNFLSVIPESLLNL 315 (1088)
Q Consensus 239 ~~~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l~~l 315 (1088)
..+.+++++.||||.|-+.. .+-.....+++|+.|+|+.|++........ ..++.|+.|.|+.|.++..
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k-------- 212 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWK-------- 212 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHH--------
Confidence 34445555555555554442 122333455556666666665542222211 1234444444444444321
Q ss_pred CCCcEEEcCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCC--ccccCCcCcce
Q 001384 316 SKLEVLDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLP--VEISQMRSLKF 393 (1088)
Q Consensus 316 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~ 393 (1088)
.+......+++|+.|+|..|..+ .........+..|+.|||++|++-. .+ ...+.++.|+.
T Consensus 213 ---------------~V~~~~~~fPsl~~L~L~~N~~~-~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 213 ---------------DVQWILLTFPSLEVLYLEANEII-LIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQ 275 (505)
T ss_pred ---------------HHHHHHHhCCcHHHhhhhccccc-ceecchhhhhhHHhhccccCCcccc-cccccccccccchhh
Confidence 12233344444555555444311 1111112234455666666665542 22 33455666666
Q ss_pred eeccccccCCc-CCcc-----cCCCCCCcEEEccCCcCCCCCC--ccccCCCCCcEEEcccccccc
Q 001384 394 LILAHNRFNGS-IPAV-----YGNMPNLQTLDLSFNELTGPIP--PSIGNLTSLLWLMLANNSLSG 451 (1088)
Q Consensus 394 L~L~~N~l~~~-~p~~-----~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~ 451 (1088)
|+++.+.+... .|+. ...+++|++|+++.|++. ..+ ..+..+.+|+.|....|.++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhhcccccccc
Confidence 66666666532 2332 345677888888888875 222 244556777777777777763
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.10 E-value=4.3e-12 Score=133.35 Aligned_cols=40 Identities=38% Similarity=0.532 Sum_probs=25.0
Q ss_pred ccccCCccCCeeeCCCCCCCC----CcCccCCCCCCCcEEECcc
Q 001384 97 NNFSALTQLSYLDLSRNTFSG----SIPDDLSSCRSLKYLNLSH 136 (1088)
Q Consensus 97 ~~l~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~ 136 (1088)
+.+-....++.|+||+|.|.. .+...+.+.++|+.-++|+
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd 67 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD 67 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh
Confidence 344556677777777777753 2444556666677666664
No 473
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=2.1e-11 Score=131.54 Aligned_cols=190 Identities=24% Similarity=0.218 Sum_probs=115.5
Q ss_pred ccCCCCCcEEEccCccccc-----cccccCcccceecccCcccccccccccccCCCccCEEEcCCCcccc-cCcccccCC
Q 001384 194 FDGCLNLRYLDLSSNNFRG-----NIWNGLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEFIG-DFPGEVSNC 267 (1088)
Q Consensus 194 l~~l~~L~~L~Ls~N~l~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~p~~l~~l 267 (1088)
...|++++.|||+.|-+.. .+.+.|++|+.|+|+.|.+........-..++.|+.|.|+.|.++- .+...+..+
T Consensus 142 ~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~f 221 (505)
T KOG3207|consen 142 SKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTF 221 (505)
T ss_pred hhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhC
Confidence 4456666677777666554 3455666666666666666554444444455677777777777762 233334466
Q ss_pred CCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccC-cccccCCCCCcEEEcCCCcCCCchhHhhhcccccceee
Q 001384 268 RNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVI-PESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVKILA 346 (1088)
Q Consensus 268 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 346 (1088)
|+|+.|+|..|.....-.....-+..|++|+|++|++.... -...+.++.|+.|+++.|.+...-....+
T Consensus 222 Psl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~--------- 292 (505)
T KOG3207|consen 222 PSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVE--------- 292 (505)
T ss_pred CcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCcc---------
Confidence 77778888777533333334445667777777777765431 13456677777777777766533111000
Q ss_pred cCcCcccCCCCCccccCCCCcCEEEccCCccCCCCC--ccccCCcCcceeeccccccCC
Q 001384 347 LHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLP--VEISQMRSLKFLILAHNRFNG 403 (1088)
Q Consensus 347 L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~~ 403 (1088)
.......+++|++|+++.|++.. .+ ..+..+++|+.|.+..|.++.
T Consensus 293 ----------s~~kt~~f~kL~~L~i~~N~I~~-w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 293 ----------SLDKTHTFPKLEYLNISENNIRD-WRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ----------chhhhcccccceeeecccCcccc-ccccchhhccchhhhhhcccccccc
Confidence 00112356788899999998852 22 345556788888888888874
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=2.3e-10 Score=113.96 Aligned_cols=112 Identities=29% Similarity=0.315 Sum_probs=43.1
Q ss_pred cccCCccCCeeeCCCCCCCCCcCccCC-CCCCCcEEECccccccCcccCCCCCCCceeecccccccccccCchhhhcccc
Q 001384 98 NFSALTQLSYLDLSRNTFSGSIPDDLS-SCRSLKYLNLSHNILSGDLNLSGLRSLEILDLSVNRIHGEISFSFPAICEKL 176 (1088)
Q Consensus 98 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L 176 (1088)
.+.+...+++|+|++|.|+. | +.++ .+.+|+.|+|++|.|+....+..++.|++|++++|+|+... ..+...+++|
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~i~-~~l~~~lp~L 90 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISSIS-EGLDKNLPNL 90 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S-C-HHHHHH-TT-
T ss_pred cccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCccc-cchHHhCCcC
Confidence 34556678999999999983 3 3565 57899999999999998888889999999999999998543 2344557889
Q ss_pred eEEeccCccCCCCCC-ccccCCCCCcEEEccCccccc
Q 001384 177 VVANLSLNNLTGRID-TCFDGCLNLRYLDLSSNNFRG 212 (1088)
Q Consensus 177 ~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~ 212 (1088)
++|+|++|+|..... ..+..+++|+.|+|.+|.++.
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 999999999886433 567788999999999998764
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=3.3e-10 Score=112.74 Aligned_cols=110 Identities=30% Similarity=0.380 Sum_probs=32.0
Q ss_pred cCCCCCcEEEccCccccCCCccccC-CCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhhhcccccc
Q 001384 265 SNCRNLVVLNLFGNNFSGPIPAEIG-SISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVK 343 (1088)
Q Consensus 265 ~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 343 (1088)
.+..++++|+|++|+|+ .+ +.++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|+|+...+.....+++|+
T Consensus 16 ~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQ 91 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--
T ss_pred ccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCC
Confidence 34456677777777776 33 2444 466777777777777664 3466677777777777777755433333455555
Q ss_pred eeecCcCcccCCCCCccccCCCCcCEEEccCCccC
Q 001384 344 ILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFT 378 (1088)
Q Consensus 344 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 378 (1088)
.|++++|++.+......+..+++|+.|+|.+|.++
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 55555555444333344455566666666666555
No 476
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=5.5e-11 Score=121.64 Aligned_cols=138 Identities=27% Similarity=0.289 Sum_probs=106.5
Q ss_pred ccccCCCCCcEEEcCCCcCCCchhHhhhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCCccccCCc
Q 001384 310 ESLLNLSKLEVLDLSSNNFGGEVQKIFGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLPVEISQMR 389 (1088)
Q Consensus 310 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 389 (1088)
..+.....|++||||+|.|+.... ...-+|.++.|++|+|.+.. + ..+..++
T Consensus 278 ~~~dTWq~LtelDLS~N~I~~iDE--------------------------SvKL~Pkir~L~lS~N~i~~-v-~nLa~L~ 329 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLITQIDE--------------------------SVKLAPKLRRLILSQNRIRT-V-QNLAELP 329 (490)
T ss_pred EecchHhhhhhccccccchhhhhh--------------------------hhhhccceeEEeccccceee-e-hhhhhcc
Confidence 344445567777777777653221 12236788899999999873 3 3488889
Q ss_pred CcceeeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccC-CCccccCCCCCCeEEc
Q 001384 390 SLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGE-IPGEIGNCTSLLWLNL 468 (1088)
Q Consensus 390 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L 468 (1088)
+|+.||||+|.++ .+..+-.++.++++|.|+.|.|.. -..+++|-+|..||+++|+|... --..+|+|+-|+.|.|
T Consensus 330 ~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L 406 (490)
T KOG1259|consen 330 QLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRL 406 (490)
T ss_pred cceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhh
Confidence 9999999999998 777777788899999999999872 34678889999999999999842 1357999999999999
Q ss_pred cCCcCccCCCc
Q 001384 469 SNNKLSGNIPP 479 (1088)
Q Consensus 469 ~~N~l~g~ip~ 479 (1088)
.+|++.+ +|+
T Consensus 407 ~~NPl~~-~vd 416 (490)
T KOG1259|consen 407 TGNPLAG-SVD 416 (490)
T ss_pred cCCCccc-cch
Confidence 9999984 454
No 477
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.96 E-value=3.6e-09 Score=112.68 Aligned_cols=144 Identities=24% Similarity=0.298 Sum_probs=108.9
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEccccCc-cchHHHHHHHHHHhCCCCCCCCCceeEEeeEEecC---CeEEEEEEe
Q 001384 811 RIIGKGGFGTVYRGVLPDGREVAVKKLQREGL-EGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDG---SEKILVYEY 886 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~---~~~~lv~e~ 886 (1088)
+.|+.|..+.||++...+|+.+++|+...... ....++..|.+++..+.. .+..+.+++.+.... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~--~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAG--TGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhC--CCCCCCCEEEECCCCCccCCceEEEEE
Confidence 67899999999999987678999999876432 134567888888887542 123455566665553 256899999
Q ss_pred cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 001384 887 MEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHEC----------------------------------------- 925 (1088)
Q Consensus 887 ~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~----------------------------------------- 925 (1088)
++|+++.+.+.. ..++..+...++.++++++.+||+..
T Consensus 82 i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 82 VDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred eCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 999888776532 35777888888899999999998531
Q ss_pred ------------CCCeEecCCCCCCEEEcC--CCCEEEeeccccee
Q 001384 926 ------------YPPIVHRDVKASNVLLDK--EGKALVTDFGLARV 957 (1088)
Q Consensus 926 ------------~~~ivH~DLkp~NIll~~--~~~~kl~Dfg~a~~ 957 (1088)
...++|+|+.+.||+++. ++.+.++||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 146799999999999998 56789999997753
No 478
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.96 E-value=6.6e-09 Score=101.25 Aligned_cols=131 Identities=26% Similarity=0.387 Sum_probs=95.0
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEccccC-cc-------chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEE
Q 001384 811 RIIGKGGFGTVYRGVLPDGREVAVKKLQREG-LE-------GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKIL 882 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~-------~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~l 882 (1088)
..+++|+.+.+|.+.+. |.++++|.-.... .. ......+|+.++.++. --.|...+=+..+.....+
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~----~~GV~~P~v~dvD~~~~~I 76 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR----EAGVPVPIVYDVDPDNGLI 76 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH----HcCCCCCeEEEEcCCCCEE
Confidence 45889999999999774 4456666433221 11 1234567888777543 2222222334456677789
Q ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccccee
Q 001384 883 VYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARV 957 (1088)
Q Consensus 883 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~ 957 (1088)
+|||++|..|.+.+... ...++..+-.-+.-||.. +|||+||.++||++..+. +.++|||++..
T Consensus 77 ~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 77 VMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999999998765 256777888888899999 999999999999997655 99999999874
No 479
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.92 E-value=1.6e-10 Score=134.80 Aligned_cols=212 Identities=29% Similarity=0.312 Sum_probs=103.6
Q ss_pred EeccccccccccccccccCCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCcccCCCCCCCceeeccccccc
Q 001384 83 GLNLTDWNISGDIFNNFSALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDLNLSGLRSLEILDLSVNRIH 162 (1088)
Q Consensus 83 ~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~N~l~ 162 (1088)
.++++.+.|+. +-..+..+++|+.|+|.+|.|. .+...+..+++|++|+|++|.|+....+..++.|+.|++++|.|+
T Consensus 76 ~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~ 153 (414)
T KOG0531|consen 76 ELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLIS 153 (414)
T ss_pred hhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccchhhccchhhheeccCcch
Confidence 33444444443 2233556666666666666666 333335566666666666666666666666666666666666665
Q ss_pred ccccCchhhhcccceEEeccCccCCCCCC-ccccCCCCCcEEEccCccccccccccCcccceecccCccccccccccccc
Q 001384 163 GEISFSFPAICEKLVVANLSLNNLTGRID-TCFDGCLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSVFK 241 (1088)
Q Consensus 163 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 241 (1088)
....... +..|+.+++++|.+....+ . ...+.+++.+++.+| .+...-. +.
T Consensus 154 ~~~~~~~---l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n---------------------~i~~i~~---~~ 205 (414)
T KOG0531|consen 154 DISGLES---LKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGN---------------------SIREIEG---LD 205 (414)
T ss_pred hccCCcc---chhhhcccCCcchhhhhhhhh-hhhccchHHHhccCC---------------------chhcccc---hH
Confidence 3222111 3445555555555544433 2 334444444555544 4432211 11
Q ss_pred CCCccCEEEcCCCcccccCcccccCCC--CCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCc
Q 001384 242 ENCSLEIFDLSENEFIGDFPGEVSNCR--NLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLE 319 (1088)
Q Consensus 242 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 319 (1088)
....+..+++..|.++..-+ +..+. .|+.+++++|.+. .++..+..+..+..|++.+|++... ..+.....+.
T Consensus 206 ~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~ 280 (414)
T KOG0531|consen 206 LLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLS 280 (414)
T ss_pred HHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHH
Confidence 12233333555555442211 11111 2555666666555 3334445555566666665555443 2233444555
Q ss_pred EEEcCCCcCC
Q 001384 320 VLDLSSNNFG 329 (1088)
Q Consensus 320 ~L~L~~N~l~ 329 (1088)
.+.+..|.+.
T Consensus 281 ~~~~~~~~~~ 290 (414)
T KOG0531|consen 281 ELWLNDNKLA 290 (414)
T ss_pred HhccCcchhc
Confidence 5555555544
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.92 E-value=3.3e-10 Score=134.85 Aligned_cols=247 Identities=20% Similarity=0.208 Sum_probs=173.3
Q ss_pred CCCCccceecccCceEEEEEEeC-CCcEEEEEEccccCccch---HHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 805 GKFSEDRIIGKGGFGTVYRGVLP-DGREVAVKKLQREGLEGE---REFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 805 ~~~~~~~~LG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
+.+.+.+-+-+|+++.++.+.-. .|...+.|.......-.. +....+-.+.. ..++|-+++...-+.-....
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i----~p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILI----TPRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccc----cCCCCceecccCCCCCCCCc
Confidence 45667778899999999998744 454555555443211111 11122211111 13567777666655566788
Q ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecC
Q 001384 881 ILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSA 960 (1088)
Q Consensus 881 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~ 960 (1088)
++|++|..+++|...++..+..+...++.+...+.++.+|||.. .+.|+|++|.|.++..+++.+++|||.......
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred chhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 99999999999999999888788888888999999999999998 799999999999999999999999984432211
Q ss_pred C---------------------C---------CcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcCCC
Q 001384 961 G---------------------D---------SHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRALE 1010 (1088)
Q Consensus 961 ~---------------------~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p~~ 1010 (1088)
. . ........+|+.|.|||...+......+|+|+.|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 0 011223568999999999999999999999999999999999999998
Q ss_pred CCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhhcccCCCCCCCHH
Q 001384 1011 GGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRCTAEAPNARPNVK 1074 (1088)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1074 (1088)
.....-.. +.+..... -. ...+.....+..+++.+.+..+|.+|-.+.
T Consensus 1037 a~tpq~~f--~ni~~~~~-------~~-------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQIF--ENILNRDI-------PW-------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchhhhh--hccccCCC-------CC-------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 76441111 11110000 00 011233345566777788899999998765
No 481
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.90 E-value=2.7e-10 Score=132.78 Aligned_cols=246 Identities=30% Similarity=0.328 Sum_probs=155.3
Q ss_pred cCCccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCccc-CCCCCCCceeecccccccccccCchhhhcccceE
Q 001384 100 SALTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDLN-LSGLRSLEILDLSVNRIHGEISFSFPAICEKLVV 178 (1088)
Q Consensus 100 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~ 178 (1088)
..+..++.++++.|.+.. +-..+..+.+|..|++.+|+|..... +..+++|++|+|++|+|+...+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~l----------- 136 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEGL----------- 136 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccch-----------
Confidence 456677777788887763 34457778888888888888887777 77788888888888887754432
Q ss_pred EeccCccCCCCCCccccCCCCCcEEEccCccccc-cccccCcccceecccCcccccccccccccCCCccCEEEcCCCccc
Q 001384 179 ANLSLNNLTGRIDTCFDGCLNLRYLDLSSNNFRG-NIWNGLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEFI 257 (1088)
Q Consensus 179 L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 257 (1088)
..++.|+.|++++|.++. ..+..+..|+.+++++|.++..-... ...+.+++.+++.+|.+.
T Consensus 137 ----------------~~l~~L~~L~l~~N~i~~~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 137 ----------------STLTLLKELNLSGNLISDISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred ----------------hhccchhhheeccCcchhccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 333334445555554443 22233445555555555554332211 356678999999999886
Q ss_pred ccCcccccCCCCCcEEEccCccccCCCccccCCCCC--CCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHh
Q 001384 258 GDFPGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISG--LEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKI 335 (1088)
Q Consensus 258 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 335 (1088)
. ...+..+..+..+++..|.++..-+ +..+.. |+.+++++|.+... +..+..+.++..|++.+|++...-.
T Consensus 200 ~--i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~~~-- 272 (414)
T KOG0531|consen 200 E--IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNLEG-- 272 (414)
T ss_pred c--ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccccc-cccccccccccccchhhcccccccc--
Confidence 3 3334555667777999999883322 223333 89999999998763 3667788899999999998874321
Q ss_pred hhcccccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCC---CCCcc-ccCCcCcceeeccccccCCcCC
Q 001384 336 FGRFTQVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTG---PLPVE-ISQMRSLKFLILAHNRFNGSIP 406 (1088)
Q Consensus 336 ~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~p~~-l~~l~~L~~L~L~~N~l~~~~p 406 (1088)
+ ...+.+..+.+..|.+.. ..... ....+.++.+.+..|.+....+
T Consensus 273 ~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 273 L-------------------------ERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred c-------------------------cccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 1 123344444455554431 11111 4556777888888887775444
No 482
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.90 E-value=1.9e-10 Score=117.68 Aligned_cols=130 Identities=32% Similarity=0.369 Sum_probs=81.1
Q ss_pred CccCCeeeCCCCCCCCCcCccCCCCCCCcEEECccccccCcccCCCCCCCceeecccccccccccCchhhhcccceEEec
Q 001384 102 LTQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNILSGDLNLSGLRSLEILDLSVNRIHGEISFSFPAICEKLVVANL 181 (1088)
Q Consensus 102 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L 181 (1088)
-..|+.||||+|.|+ .|..++.-++.++.|+||+|.|....++..+++|++||||+|.++.... +
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls~~~G--w------------ 347 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLAECVG--W------------ 347 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhHhhhh--h------------
Confidence 356777888888887 6666777777888888888887776677777777777777777753211 1
Q ss_pred cCccCCCCCCccccCCCCCcEEEccCccccccccccCcccceecccCcccccccccccccCCCccCEEEcCCCcccc-cC
Q 001384 182 SLNNLTGRIDTCFDGCLNLRYLDLSSNNFRGNIWNGLAQLVEFSVSENVLSGVVSSSVFKENCSLEIFDLSENEFIG-DF 260 (1088)
Q Consensus 182 ~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~ 260 (1088)
=..+.+.+.|.|++|.+.. + +-+..+-+|..||+++|+|.. .-
T Consensus 348 ------------h~KLGNIKtL~La~N~iE~-----L-------------------SGL~KLYSLvnLDl~~N~Ie~lde 391 (490)
T KOG1259|consen 348 ------------HLKLGNIKTLKLAQNKIET-----L-------------------SGLRKLYSLVNLDLSSNQIEELDE 391 (490)
T ss_pred ------------HhhhcCEeeeehhhhhHhh-----h-------------------hhhHhhhhheeccccccchhhHHH
Confidence 1233444555555554431 1 112223356666666666542 11
Q ss_pred cccccCCCCCcEEEccCccccC
Q 001384 261 PGEVSNCRNLVVLNLFGNNFSG 282 (1088)
Q Consensus 261 p~~l~~l~~L~~L~L~~N~l~~ 282 (1088)
-..++++|.|++|.|.+|.+.+
T Consensus 392 V~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 392 VNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hcccccccHHHHHhhcCCCccc
Confidence 2457788888888888888874
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.87 E-value=2.3e-08 Score=96.65 Aligned_cols=141 Identities=22% Similarity=0.360 Sum_probs=99.5
Q ss_pred ccceecccCceEEEEEEeCCCcEEEEEEcc-cc----Ccc---chHHHHHHHHHHhCCCCCCCCCceeEEeeEEecCCeE
Q 001384 809 EDRIIGKGGFGTVYRGVLPDGREVAVKKLQ-RE----GLE---GEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEK 880 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~-~~----~~~---~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~ 880 (1088)
....+-+|+.+.|+++.+. |+.++||.-. +. ... ..+...+|++.+.++. --.|.-..=++.+...-
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~----~~GI~~P~l~~~D~~~~ 85 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR----ALGIPAPRLIFIDTYGG 85 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH----HhCCCCceEEEEecCCC
Confidence 4578999999999999984 7776766432 21 111 2356678888877643 11222222234455566
Q ss_pred EEEEEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCC---CEEEeeccc
Q 001384 881 ILVYEYMEG-GSLEDIISDRT--RLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEG---KALVTDFGL 954 (1088)
Q Consensus 881 ~lv~e~~~~-gsL~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~---~~kl~Dfg~ 954 (1088)
.++|||++| -++.+++.... .........++.+|-+.+.-||.. +||||||..+||++..++ .+.++|||+
T Consensus 86 ~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgl 162 (229)
T KOG3087|consen 86 QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGL 162 (229)
T ss_pred eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecc
Confidence 789999976 47888876532 223333378999999999999999 999999999999997654 458999999
Q ss_pred cee
Q 001384 955 ARV 957 (1088)
Q Consensus 955 a~~ 957 (1088)
+..
T Consensus 163 s~~ 165 (229)
T KOG3087|consen 163 SSV 165 (229)
T ss_pred hhc
Confidence 865
No 484
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.86 E-value=6.8e-08 Score=104.34 Aligned_cols=256 Identities=18% Similarity=0.220 Sum_probs=159.4
Q ss_pred ccceecccCceEEEEEEeCCCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEe------cC-CeEE
Q 001384 809 EDRIIGKGGFGTVYRGVLPDGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCL------DG-SEKI 881 (1088)
Q Consensus 809 ~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~------~~-~~~~ 881 (1088)
..+.||+|+.+.+|-.-- -...+.|++.......+.+...|+ ... -.||-+-.-+.|=. ++ ....
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aqk~a~l---a~~---p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQKVAEL---AAT---PDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHHHHHHHHh---ccC---CCCcchhhhhcccHHHhhCCCccceeE
Confidence 357799999999997542 233567888876555444433333 221 35664433222211 12 2256
Q ss_pred EEEEecCCC-CHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeeccc
Q 001384 882 LVYEYMEGG-SLEDIISD------RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGL 954 (1088)
Q Consensus 882 lv~e~~~~g-sL~~~l~~------~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~ 954 (1088)
+.|..+++. ...++... .....|.-++++++.+|.+.+.||.. |.+-+|+.++|+|+++++.+.+.|=+.
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 778887764 23333321 12378999999999999999999999 999999999999999999999998654
Q ss_pred ceeecCCCCcccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhC-CcCCCCCc-----h--hHHHHHH
Q 001384 955 ARVVSAGDSHVSTTIAGTVGYVAPEYGQ-----TWQATTKGDVYSFGVLAMELATG-RRALEGGE-----E--CLVEWGR 1021 (1088)
Q Consensus 955 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~elltg-~~p~~~~~-----~--~~~~~~~ 1021 (1088)
-.... +.......+|...|.+||.-. +..-+...|.|.+|+++++++.| ++||.+-- + ..-..+.
T Consensus 164 fqi~~--ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 164 FQINA--NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred eeecc--CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 43322 223344567889999999643 34557789999999999998886 99997531 1 1111222
Q ss_pred hhhccCCCCCCccccchhhcCCCccc-cHHHHHHHHHHHhhhccc--CCCCCCCHHHHHHHHHhh
Q 001384 1022 RVMGYGRHGPGRAVIPVVLLGSGLAE-GAEEMSELLRIGVRCTAE--APNARPNVKEVLAMLIKI 1083 (1088)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~--dP~~RPs~~eil~~L~~i 1083 (1088)
....|...... . ........ ..-.+..+.-+..+|+.. .|.-||+++.++..|.++
T Consensus 242 g~f~ya~~~~~-g-----~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 242 GRFAYASDQRR-G-----LKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred ceeeechhccC-C-----CCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 22211111000 0 00000000 112234555566688865 367899999988777654
No 485
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.81 E-value=2e-07 Score=103.63 Aligned_cols=166 Identities=19% Similarity=0.273 Sum_probs=124.9
Q ss_pred ceEEEEEEeC-CCcEEEEEEccccCccchHHHHHHHHHHhCCCCCCCCCceeEEeeEEec----CCeEEEEEEecCC-CC
Q 001384 818 FGTVYRGVLP-DGREVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLD----GSEKILVYEYMEG-GS 891 (1088)
Q Consensus 818 ~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gs 891 (1088)
-.+.|++... +|..|++|++..........-..-++.+++ +.|+|+|++.+++.. +...++||+|.++ ++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkk----l~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKK----LCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHH----hccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 3578999864 899999999954332222122233455554 579999999998873 4578999999885 57
Q ss_pred HHHHHh---------------hcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccce
Q 001384 892 LEDIIS---------------DRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLAR 956 (1088)
Q Consensus 892 L~~~l~---------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~ 956 (1088)
|.++-- ...+.++..+|.++.|+..||.++|+. |+..+-|.+.+|+++.+.+++|...|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEeccccee
Confidence 776541 122478899999999999999999999 99999999999999999999999888877
Q ss_pred eecCCCCcccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCcC
Q 001384 957 VVSAGDSHVSTTIAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRA 1008 (1088)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~elltg~~p 1008 (1088)
.+..... |-+ +-..+-|.-.+|.++..+.||..-
T Consensus 442 vl~~d~~---------------~~l---e~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 442 VLQEDPT---------------EPL---ESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred eecCCCC---------------cch---hHHhhhhHHHHHHHHHHHhhcccc
Confidence 6543220 111 123467999999999999998644
No 486
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.75 E-value=4.5e-08 Score=101.25 Aligned_cols=138 Identities=25% Similarity=0.308 Sum_probs=98.5
Q ss_pred CCCccceecccCceEEEEEEeCCCcEEEEEEccccC----------------------ccchHHHHHHHHHHhCCCCCCC
Q 001384 806 KFSEDRIIGKGGFGTVYRGVLPDGREVAVKKLQREG----------------------LEGEREFRAEMEVLSGNGFGWP 863 (1088)
Q Consensus 806 ~~~~~~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~~~~~l~ 863 (1088)
-+.+...||.|..+.||.|.+.+|.++|||.=+... .......++|+++|.++. .
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~---~ 168 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLY---P 168 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhh---h
Confidence 355678999999999999999999999999643111 011234567888887642 1
Q ss_pred C-CceeEEeeEEecCCeEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEc
Q 001384 864 H-PNLVTLYGWCLDGSEKILVYEYMEGGSLEDIISDRTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLD 942 (1088)
Q Consensus 864 h-~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~ 942 (1088)
+ -.+.+.+++ +...+||||++|-.|+..- ++......++..|++-+.-+-.. ||||+|+.+-||+++
T Consensus 169 ~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 169 EGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred cCCCCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 1 134455544 4567999999996666532 23444555666666666666666 999999999999999
Q ss_pred CCCCEEEeecccceee
Q 001384 943 KEGKALVTDFGLARVV 958 (1088)
Q Consensus 943 ~~~~~kl~Dfg~a~~~ 958 (1088)
++|.+.++||--+...
T Consensus 237 ~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 237 EDGDIVVIDWPQAVPI 252 (304)
T ss_pred cCCCEEEEeCcccccC
Confidence 9999999999766543
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.73 E-value=6.4e-08 Score=98.22 Aligned_cols=128 Identities=26% Similarity=0.351 Sum_probs=82.1
Q ss_pred EEEEEEeCCCcEEEEEEccccCc-------------c-------------chHHHHHHHHHHhCCCCCCCCCceeEEeeE
Q 001384 820 TVYRGVLPDGREVAVKKLQREGL-------------E-------------GEREFRAEMEVLSGNGFGWPHPNLVTLYGW 873 (1088)
Q Consensus 820 ~Vy~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~~~~~l~h~niv~l~~~ 873 (1088)
.||.|...+|..+|||+.+.... . .....++|++.|.++... --++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~--Gv~vP~p~~~ 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA--GVPVPKPYDY 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT--T-SS--EEEE
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC--CccCCcEEEE
Confidence 48999998899999998853210 0 013467788988875421 1234455544
Q ss_pred EecCCeEEEEEEecC--CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCCEEEcCCCCEEEe
Q 001384 874 CLDGSEKILVYEYME--GGSLEDIISDRTRLTWRRRLDIAIDVARALVFL-HHECYPPIVHRDVKASNVLLDKEGKALVT 950 (1088)
Q Consensus 874 ~~~~~~~~lv~e~~~--~gsL~~~l~~~~~l~~~~~~~i~~qi~~~L~yL-H~~~~~~ivH~DLkp~NIll~~~~~~kl~ 950 (1088)
. ..++||||++ |..+..+.... ++..+...++.+++..+..+ |.. ||||||+.+.||+++++ .+.++
T Consensus 79 ~----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 79 N----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp E----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE-
T ss_pred e----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEE
Confidence 2 3479999998 65554433221 22455677888888866665 576 99999999999999887 99999
Q ss_pred ecccceeec
Q 001384 951 DFGLARVVS 959 (1088)
Q Consensus 951 Dfg~a~~~~ 959 (1088)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999887653
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.69 E-value=1.8e-08 Score=125.19 Aligned_cols=273 Identities=20% Similarity=0.211 Sum_probs=166.0
Q ss_pred CCCcEEEccCccccc-cccccCcccceecccCccc-ccccccccccCCCccCEEEcCCCcccccCcccccCCCCCcEEEc
Q 001384 198 LNLRYLDLSSNNFRG-NIWNGLAQLVEFSVSENVL-SGVVSSSVFKENCSLEIFDLSENEFIGDFPGEVSNCRNLVVLNL 275 (1088)
Q Consensus 198 ~~L~~L~Ls~N~l~~-~~~~~l~~L~~L~L~~n~l-~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 275 (1088)
...+...+-+|++.. ......++|+.|-+..|.. -..++...|..++.|++|||++|.-.+.+|..++++-+|++|+|
T Consensus 523 ~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L 602 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDL 602 (889)
T ss_pred hheeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccc
Confidence 455666666665432 1122334677777777752 23456677888999999999998877899999999999999999
Q ss_pred cCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCC--CchhHhhhcccccceeecCcCccc
Q 001384 276 FGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFG--GEVQKIFGRFTQVKILALHSNSYI 353 (1088)
Q Consensus 276 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~n~~~ 353 (1088)
++..+. .+|..++++..|.+|++..+.....+|..+..+++|++|.+..-... ...-..+..+.+|+.+.......
T Consensus 603 ~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~- 680 (889)
T KOG4658|consen 603 SDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV- 680 (889)
T ss_pred cCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh-
Confidence 999998 88999999999999999988776667777778999999998776522 22233345555555555433221
Q ss_pred CCCCCccccCCCCcC----EEEccCCccCCCCCccccCCcCcceeeccccccCCcCCcccCCC------CCCcEEEccCC
Q 001384 354 DGMNSSGILKLPNIS----RLDLSHNNFTGPLPVEISQMRSLKFLILAHNRFNGSIPAVYGNM------PNLQTLDLSFN 423 (1088)
Q Consensus 354 ~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~L~~N 423 (1088)
.....+..+..|. .+.+..+... ..+..++.+.+|+.|.+.++.+........... +++..+...++
T Consensus 681 --~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~ 757 (889)
T KOG4658|consen 681 --LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNC 757 (889)
T ss_pred --HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcc
Confidence 0011112222222 2333333333 445566677777777777777753222221111 11222222222
Q ss_pred cCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcCccC
Q 001384 424 ELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKLSGN 476 (1088)
Q Consensus 424 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ 476 (1088)
..- ..+.+.--.++|+.|++..+.....+.+....+..+..+.+..+.+.|.
T Consensus 758 ~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 758 HML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred ccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 211 2333333456777777777766655555566666666666666666543
No 489
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.67 E-value=3.1e-07 Score=99.17 Aligned_cols=143 Identities=20% Similarity=0.105 Sum_probs=97.5
Q ss_pred ceecccCceEEEEEEeCCCcEEEEEEccccCc-----------cchHHHHHHHHHHhCCC-CCCCCCceeEEeeEEec--
Q 001384 811 RIIGKGGFGTVYRGVLPDGREVAVKKLQREGL-----------EGEREFRAEMEVLSGNG-FGWPHPNLVTLYGWCLD-- 876 (1088)
Q Consensus 811 ~~LG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~~~-~~l~h~niv~l~~~~~~-- 876 (1088)
+.+-+-....|+++.. +|+.+.||+...... .....+.+|...+.++. ..+..|.+|-+...-..
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444445667665 578899997754321 11123566766554432 12455555444321111
Q ss_pred CCeEEEEEEecCCC-CHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcC-------CCC
Q 001384 877 GSEKILVYEYMEGG-SLEDIISD--RTRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDK-------EGK 946 (1088)
Q Consensus 877 ~~~~~lv~e~~~~g-sL~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~-------~~~ 946 (1088)
....++|||++++. +|.+++.. ..+.+...+..++.+++..+.-||.. ||+|+|++++|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 23568999999886 89999864 23456677889999999999999999 9999999999999985 468
Q ss_pred EEEeeccccee
Q 001384 947 ALVTDFGLARV 957 (1088)
Q Consensus 947 ~kl~Dfg~a~~ 957 (1088)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998753
No 490
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.64 E-value=2.2e-08 Score=74.81 Aligned_cols=40 Identities=38% Similarity=0.891 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHhhcccCCCCCcccccccCCC--CCCcccCCceeC
Q 001384 33 ETDREVLSNLRSFLENNNPVNEGHYMQWNQS--SSPCEWPGIICS 75 (1088)
Q Consensus 33 ~~d~~~l~~~~~~~~~~~~~~~~~~~sW~~~--~~~C~W~gv~C~ 75 (1088)
++|++||++||+.+... +.+.+.+|+.+ ++||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~---~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNND---PSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-S---C-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccc---cCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999999752 24689999987 799999999996
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.59 E-value=3.2e-08 Score=80.93 Aligned_cols=60 Identities=47% Similarity=0.576 Sum_probs=33.4
Q ss_pred CCcEEEccCCcCCCCCCccccCCCCCcEEEccccccccCCCccccCCCCCCeEEccCCcC
Q 001384 414 NLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNSLSGEIPGEIGNCTSLLWLNLSNNKL 473 (1088)
Q Consensus 414 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 473 (1088)
+|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555533334555555566666666655544445555666666666665553
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.57 E-value=3.7e-08 Score=80.56 Aligned_cols=59 Identities=42% Similarity=0.613 Sum_probs=27.2
Q ss_pred CcceeeccccccCCcCCcccCCCCCCcEEEccCCcCCCCCCccccCCCCCcEEEccccc
Q 001384 390 SLKFLILAHNRFNGSIPAVYGNMPNLQTLDLSFNELTGPIPPSIGNLTSLLWLMLANNS 448 (1088)
Q Consensus 390 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 448 (1088)
+|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333344444444444444444443333444444445555554444
No 493
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.54 E-value=4.4e-08 Score=121.78 Aligned_cols=102 Identities=23% Similarity=0.245 Sum_probs=49.3
Q ss_pred ccCCeeeCCCCCCCCCcCccCCCCCCCcEEECcccc--ccCcc--cCCCCCCCceeecccccccccccCchhhhcccceE
Q 001384 103 TQLSYLDLSRNTFSGSIPDDLSSCRSLKYLNLSHNI--LSGDL--NLSGLRSLEILDLSVNRIHGEISFSFPAICEKLVV 178 (1088)
Q Consensus 103 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~--l~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~ 178 (1088)
...+...+.+|.+. .++... .+++|++|-+..|. +.... .|..++.|+.|||++|.=.+..|..+... -+|++
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~L-i~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGEL-VHLRY 599 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhh-hhhhc
Confidence 45566666666664 333332 23356666666664 22221 15556666666666554444444443322 34445
Q ss_pred EeccCccCCCCCCccccCCCCCcEEEccCc
Q 001384 179 ANLSLNNLTGRIDTCFDGCLNLRYLDLSSN 208 (1088)
Q Consensus 179 L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N 208 (1088)
|+|++..++ .+|..+.++.+|.+|++..+
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~ 628 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVT 628 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccc
Confidence 555555544 33444455555555554443
No 494
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.51 E-value=3.2e-08 Score=114.24 Aligned_cols=150 Identities=19% Similarity=0.279 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCCEEEeecccceeecCCCCcccc--------cccccccccCccccCC
Q 001384 912 IDVARALVFLHHECYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVSAGDSHVST--------TIAGTVGYVAPEYGQT 983 (1088)
Q Consensus 912 ~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~ 983 (1088)
.+++.|+.|+|.. .++||++|.|++|.++.++..|++.|+.+........+... .......|.|||++..
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455999999998 49999999999999999999999999988765442222211 1233457999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHh-CCcCCCCCchhHHHHHHhhhccCCCCCCccccchhhcCCCccccHHHHHHHHHHHhhh
Q 001384 984 WQATTKGDVYSFGVLAMELAT-GRRALEGGEECLVEWGRRVMGYGRHGPGRAVIPVVLLGSGLAEGAEEMSELLRIGVRC 1062 (1088)
Q Consensus 984 ~~~~~~~DvwslG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 1062 (1088)
...+.++|+||+|+++|.+.. |+.-+... .....+............ ......+.++.+=+.++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-~~~~~~~~~~~~~~~~~~--------------~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAAN-GGLLSYSFSRNLLNAGAF--------------GYSNNLPSELRESLKKL 248 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhcc-CCcchhhhhhcccccccc--------------cccccCcHHHHHHHHHH
Confidence 899999999999999999994 55444433 222222222111111000 01133445677777789
Q ss_pred cccCCCCCCCHHHHHH
Q 001384 1063 TAEAPNARPNVKEVLA 1078 (1088)
Q Consensus 1063 l~~dP~~RPs~~eil~ 1078 (1088)
+..++..||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 9999999997776643
No 495
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=5.4e-09 Score=107.48 Aligned_cols=176 Identities=25% Similarity=0.210 Sum_probs=111.9
Q ss_pred CCceeecccccccccccCchhhhcccceEEeccCccCCCCCCccccCCCCCcEEEccCc-cccc----cccccCccccee
Q 001384 150 SLEILDLSVNRIHGEISFSFPAICEKLVVANLSLNNLTGRIDTCFDGCLNLRYLDLSSN-NFRG----NIWNGLAQLVEF 224 (1088)
Q Consensus 150 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N-~l~~----~~~~~l~~L~~L 224 (1088)
.|++||||+..|+-.--..+..-|++|+.|+|.++++.+.+...++...+|+.|+|+.+ .++. .++.+++.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 36666666666554333344455677777777777777777777778888888888775 3554 345667777777
Q ss_pred cccCccccccccc-ccccCCCccCEEEcCCCcc---cccCcccccCCCCCcEEEccCcc-ccCCCccccCCCCCCCEEeC
Q 001384 225 SVSENVLSGVVSS-SVFKENCSLEIFDLSENEF---IGDFPGEVSNCRNLVVLNLFGNN-FSGPIPAEIGSISGLEALFL 299 (1088)
Q Consensus 225 ~L~~n~l~~~~~~-~~~~~l~~L~~L~Ls~n~l---~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L 299 (1088)
+++.+.++...-. .+-.--.+|+.|+|++++= ...+..-...+++|.+|||++|. ++.....+|..++.|++|.|
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 7777766543222 2222234778888877631 11222234567888888888765 45444456677888888888
Q ss_pred CCCcCCccCccc---ccCCCCCcEEEcCCCc
Q 001384 300 GKNNFLSVIPES---LLNLSKLEVLDLSSNN 327 (1088)
Q Consensus 300 ~~N~l~~~~p~~---l~~l~~L~~L~L~~N~ 327 (1088)
+.|. +++|.. +...++|.+|+..++-
T Consensus 346 sRCY--~i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 346 SRCY--DIIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred hhhc--CCChHHeeeeccCcceEEEEecccc
Confidence 7775 345553 4556778888877763
No 496
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.50 E-value=1e-08 Score=105.45 Aligned_cols=86 Identities=29% Similarity=0.265 Sum_probs=40.7
Q ss_pred CCCCCCcEEECccccccCccc---C-CCCCCCceeeccccccccccc-CchhhhcccceEEeccCccCCCCCCccccCCC
Q 001384 124 SSCRSLKYLNLSHNILSGDLN---L-SGLRSLEILDLSVNRIHGEIS-FSFPAICEKLVVANLSLNNLTGRIDTCFDGCL 198 (1088)
Q Consensus 124 ~~l~~L~~L~Ls~n~l~~~~~---l-~~l~~L~~L~Ls~N~l~~~~~-~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~ 198 (1088)
..+.-+..|.|.++.|..... + +.++.+++|||.+|+|++... .++...++.|+.|+|+.|++...+...=..+.
T Consensus 42 ~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~ 121 (418)
T KOG2982|consen 42 SSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLK 121 (418)
T ss_pred ccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCccccc
Confidence 334455566666666654321 2 235566677777776664321 12233334455555555555443332112334
Q ss_pred CCcEEEccCcc
Q 001384 199 NLRYLDLSSNN 209 (1088)
Q Consensus 199 ~L~~L~Ls~N~ 209 (1088)
+|+.|-|.+..
T Consensus 122 nl~~lVLNgT~ 132 (418)
T KOG2982|consen 122 NLRVLVLNGTG 132 (418)
T ss_pred ceEEEEEcCCC
Confidence 44444444443
No 497
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.43 E-value=1.3e-06 Score=91.29 Aligned_cols=109 Identities=25% Similarity=0.345 Sum_probs=80.7
Q ss_pred HHHHHHHHHhCCC-CCCCCCceeEEeeEEec-CCeEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001384 847 EFRAEMEVLSGNG-FGWPHPNLVTLYGWCLD-GSEKILVYEYMEGG-SLEDIISDRTRLTWRRRLDIAIDVARALVFLHH 923 (1088)
Q Consensus 847 ~~~~E~~~l~~~~-~~l~h~niv~l~~~~~~-~~~~~lv~e~~~~g-sL~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~ 923 (1088)
...+|...+.++. ..+.-|..+-+...-.. ....++|+|++++. +|.+++......+......++.+++..++-||.
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~ 136 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHD 136 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 4555655443321 12455555544322111 13458999999874 899999875557778889999999999999999
Q ss_pred cCCCCeEecCCCCCCEEEcCCC---CEEEeecccceee
Q 001384 924 ECYPPIVHRDVKASNVLLDKEG---KALVTDFGLARVV 958 (1088)
Q Consensus 924 ~~~~~ivH~DLkp~NIll~~~~---~~kl~Dfg~a~~~ 958 (1088)
. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 137 ~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 137 A---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred C---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9 999999999999999887 8999999987653
No 498
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.40 E-value=1.7e-06 Score=88.97 Aligned_cols=157 Identities=22% Similarity=0.256 Sum_probs=101.8
Q ss_pred CccCHHHHHHHcCCCCccceec---ccCceEEEEEEeCCCcEEEEEEccccCccchH-------------------H---
Q 001384 793 TAFTYSDILKATGKFSEDRIIG---KGGFGTVYRGVLPDGREVAVKKLQREGLEGER-------------------E--- 847 (1088)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~LG---~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------------------~--- 847 (1088)
...++..+.+...+..+....| .|..+.||+|...++..+|||+++......++ +
T Consensus 33 D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~ 112 (268)
T COG1718 33 DKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVF 112 (268)
T ss_pred hhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHH
Confidence 4456666777777776666554 67778899999888999999999754322110 0
Q ss_pred --HHHHHHHHhCCCCCCCCCceeEEeeEEecCCeEEEEEEecCCCC-HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 001384 848 --FRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMEGGS-LEDIISDRTRLTWRRRLDIAIDVARALVFLHHE 924 (1088)
Q Consensus 848 --~~~E~~~l~~~~~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs-L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~ 924 (1088)
...|+.-|.++.. -+-.+.+.+++ ....+||||+.... -.-.+++- ++...++..+..++++.+.-|-..
T Consensus 113 ~W~~kEf~NL~R~~e--AGVrvP~Pi~~----~~nVLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~ 185 (268)
T COG1718 113 AWARKEFRNLKRAYE--AGVRVPEPIAF----RNNVLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKE 185 (268)
T ss_pred HHHHHHHHHHHHHHH--cCCCCCCceee----cCCeEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHh
Confidence 1234333332210 11122222322 24579999996531 11122222 233346788888999999988874
Q ss_pred CCCCeEecCCCCCCEEEcCCCCEEEeecccceeec
Q 001384 925 CYPPIVHRDVKASNVLLDKEGKALVTDFGLARVVS 959 (1088)
Q Consensus 925 ~~~~ivH~DLkp~NIll~~~~~~kl~Dfg~a~~~~ 959 (1088)
+ ++||+||+.-|||+. ++.+.|+|||-|....
T Consensus 186 a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 186 A--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred c--CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 3 999999999999999 8899999999987654
No 499
>PRK09902 hypothetical protein; Provisional
Probab=98.39 E-value=5.6e-06 Score=84.38 Aligned_cols=140 Identities=21% Similarity=0.179 Sum_probs=101.3
Q ss_pred ecccCceEEEEEEeCCCcEEEEEEcccc---C---ccchHHHHHHHHHHhCCCC-CCCCCceeEEeeEEecC--CeEEEE
Q 001384 813 IGKGGFGTVYRGVLPDGREVAVKKLQRE---G---LEGEREFRAEMEVLSGNGF-GWPHPNLVTLYGWCLDG--SEKILV 883 (1088)
Q Consensus 813 LG~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~~~~-~l~h~niv~l~~~~~~~--~~~~lv 883 (1088)
-|+||.+.|+..... |+.+-+|+-... . +-.+..|.+|+..+.++.. .+.-|-++ +.+....+ ..-++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467899999998764 556888876511 1 3356789999887776442 12333333 22221122 235799
Q ss_pred EEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEcCCCC--EEEeeccccee
Q 001384 884 YEYMEG-GSLEDIISDR--TRLTWRRRLDIAIDVARALVFLHHECYPPIVHRDVKASNVLLDKEGK--ALVTDFGLARV 957 (1088)
Q Consensus 884 ~e~~~~-gsL~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~~~~ivH~DLkp~NIll~~~~~--~kl~Dfg~a~~ 957 (1088)
+|-++| .+|.+++.+. .+.+..+...+..+++.++.-||.. |+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998764 4899998663 3567888889999999999999999 9999999999999986677 99999986653
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.33 E-value=1.5e-08 Score=115.71 Aligned_cols=180 Identities=24% Similarity=0.235 Sum_probs=89.9
Q ss_pred CccccCCCCCcEEEccCccccc-cccccC-cccceecccCcccc---ccccc--ccccCC---CccCEEEcCCCcccccC
Q 001384 191 DTCFDGCLNLRYLDLSSNNFRG-NIWNGL-AQLVEFSVSENVLS---GVVSS--SVFKEN---CSLEIFDLSENEFIGDF 260 (1088)
Q Consensus 191 ~~~l~~l~~L~~L~Ls~N~l~~-~~~~~l-~~L~~L~L~~n~l~---~~~~~--~~~~~l---~~L~~L~Ls~n~l~~~~ 260 (1088)
|-.+....+|++|.|.++.|.. .....+ .+|+.|..+ |.+. .++.. +.+.+- -.|...+.+.|.+. ..
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~m 179 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LM 179 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hH
Confidence 4445667778888888877653 111111 233333222 2111 11110 011110 14555556666655 44
Q ss_pred cccccCCCCCcEEEccCccccCCCccccCCCCCCCEEeCCCCcCCccCcccccCCCCCcEEEcCCCcCCCchhHhhhccc
Q 001384 261 PGEVSNCRNLVVLNLFGNNFSGPIPAEIGSISGLEALFLGKNNFLSVIPESLLNLSKLEVLDLSSNNFGGEVQKIFGRFT 340 (1088)
Q Consensus 261 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 340 (1088)
..++.-++.|+.|||++|+++.. +.+..++.|++|||++|.+..+.--....+ +|+.|.+++|.++..
T Consensus 180 D~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL--------- 247 (1096)
T KOG1859|consen 180 DESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTL--------- 247 (1096)
T ss_pred HHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhh---------
Confidence 55555566666666666666532 255566666666666666554322222223 266666666655422
Q ss_pred ccceeecCcCcccCCCCCccccCCCCcCEEEccCCccCCCCC-ccccCCcCcceeeccccccC
Q 001384 341 QVKILALHSNSYIDGMNSSGILKLPNISRLDLSHNNFTGPLP-VEISQMRSLKFLILAHNRFN 402 (1088)
Q Consensus 341 ~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~ 402 (1088)
.++.++.+|+.|||++|-|.+.-. ..++.+..|+.|+|.+|.+.
T Consensus 248 ------------------~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 248 ------------------RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ------------------hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 233455666666666666654211 12344566666777776664
Done!