BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001387
         (1088 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
          Length = 1089

 Score = 2144 bits (5554), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1043/1089 (95%), Positives = 1071/1089 (98%), Gaps = 1/1089 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAE+SE+ITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPW+QNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA+AFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SASAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VY+GSSYGDSQLIK++LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA+Y+QLVQVTS SVRLV STSRELR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEWK+P GYSVNVATANA+QVLLATGGGHLVYLEIGDG LTEVKHAQLEY+ISCLDINPI
Sbjct: 481  NEWKAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP++SQ+AAVGMWTDISVRIFSLPDLNLITKE+LGGEIIPRSVLLC+FEGI YLLCAL
Sbjct: 541  GENPNFSQLAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNFLLNM TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG+LTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQSRTFAICSLK NQS  E+SEMHF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD
Sbjct: 721  QEQSRTFAICSLKYNQSSTEDSEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKWMLRDDGTRELQSE GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
Sbjct: 841  NQKIQLYKWMLRDDGTRELQSESGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 900

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWMSAVEILDDDIYLGAENNFN+FTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 960

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH+QY+FLEKLQ NLRKV
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKV 1020

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVGGL+HEQWRSFNNEKKTVDAKNFLDGDLIE+FLDL+RTRMDEISK M VSVEELCK
Sbjct: 1021 IKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCK 1080

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
 gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
          Length = 1088

 Score = 2129 bits (5516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1033/1088 (94%), Positives = 1065/1088 (97%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFTS QELNLIIAKCTRIEI+LLTPQGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTSSQELNLIIAKCTRIEINLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAE+SELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL+GC+KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCSKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDF+EGPWSQNNLDNGADLLIPVPPP CGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFIEGPWSQNNLDNGADLLIPVPPPFCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SAN F+AIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SANVFRAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA V+IGSSYGDSQL+KLNL PDAKG+YVEVL+RYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVFIGSSYGDSQLVKLNLHPDAKGTYVEVLDRYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS TDDPFDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN+EDELEETEIEGFCSQ QTLFCH A++NQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
             EW +P GYS+NVATANA+QVLLATGGGHLVYLEIGDG LT+ KHAQLE EISCLDINPI
Sbjct: 481  QEWNAPSGYSINVATANATQVLLATGGGHLVYLEIGDGTLTQAKHAQLECEISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP+YSQ+AAVGMWTDISVRIFSLPDLNLITKE LGGEIIPRSVLLC+FEGI+YLLCAL
Sbjct: 541  GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCSFEGIAYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNFLLN+ TG L DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFLLNLSTGGLKDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL+IGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQSRTF+ICS+KNQS AEESEMHF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS
Sbjct: 721  QEQSRTFSICSMKNQSNAEESEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN
Sbjct: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
Sbjct: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
Sbjct: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ+NLRKVI
Sbjct: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVI 1020

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR+RMDEISK M +SVEELCKR
Sbjct: 1021 KGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCKR 1080

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1081 VEELTRLH 1088


>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine max]
          Length = 1089

 Score = 2104 bits (5451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1023/1089 (93%), Positives = 1062/1089 (97%), Gaps = 1/1089 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MSIWNYVVTAHKPTNVTHSCVGNFTSPQ+LNLIIAKCTRIEIHLL+PQGLQPMLDVPIYG
Sbjct: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQD+LFIATERYKFCVLQWD+E++EL+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETAELVTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDF+EGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFLEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDH GLL LLVITHEKEKVTGLKIE LGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKIEPLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VYIGSSYGDSQLIKLNLQPDAKGSYVE LERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA++NQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEW +P GYSVNVATANA+QVLLATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPI
Sbjct: 481  NEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP++S +AAVGMWTDISVRIFSLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GENPNHSHLAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF+LN  TGEL DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFMLNTSTGELADRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQSRTFAICSLK N +  E+SEMHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD
Sbjct: 721  QEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +NVYYCVGTAYVLPEENEPTKGRILVF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAI
Sbjct: 781  NNVYYCVGTAYVLPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKW+LRDDGT ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
Sbjct: 841  NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 900

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWMSAVEI+DDDIYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 960

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKV
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV 1020

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVGGL+HEQWRSFNNEKKTV+A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCK
Sbjct: 1021 IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKALDVSVEELCK 1080

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine max]
          Length = 1089

 Score = 2102 bits (5447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1020/1089 (93%), Positives = 1062/1089 (97%), Gaps = 1/1089 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            M+IWNYVVTAHKPTNVTHSCVGNFTSPQ+LNLIIAKCTRIEIHLL+PQGLQPMLDVPIYG
Sbjct: 1    MTIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQD+LFIATERYKFCVLQWD+E+ EL+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETGELVTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDH GL+ LLVI HEKEKVTGLKIE LGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLVSLLVIIHEKEKVTGLKIEPLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VY+GSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA++NQLVQVTS SVRLVSST+R+LR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEW +P GYSVNVATANA+QVLLATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPI
Sbjct: 481  NEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP++S +AAVGMWTDISVRIFSLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GENPNHSNLAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF+LN  TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQSRTFAICSLK N +  E+SEMHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD
Sbjct: 721  QEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +NVYYCVGTAYVLPEENEPTKGRI+VF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAI
Sbjct: 781  NNVYYCVGTAYVLPEENEPTKGRIIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKW+LRDDGT ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
Sbjct: 841  NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 900

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWMSAVEI+DDDIYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 960

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKV
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV 1020

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVGGL+HEQWRSFNNEKKTV+A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCK
Sbjct: 1021 IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKAVDVSVEELCK 1080

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
 gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
          Length = 1088

 Score = 2091 bits (5418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1007/1088 (92%), Positives = 1057/1088 (97%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS WNYVVTAHKPT+VTHSCVGNFTSPQELNLI+AKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL+GCAKPTI VL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDHAGL+HLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNAVV++GSSYGDSQL+KLNL PDAKGSYVEVLERY+NLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAVVFVGSSYGDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            +EW +P G++VNVATANASQVLLATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPI
Sbjct: 481  DEWHAPAGFTVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+YSQ+A+VGMWTDISVRIFSLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GDNPNYSQLASVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF L+  TG+L DRKKVSLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFQLDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQ+RTF ICSL NQS AEESEMHFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF+DD 
Sbjct: 721  QEQTRTFGICSLGNQSNAEESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTDDK 780

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAIN
Sbjct: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAIN 840

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGA
Sbjct: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGA 900

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWMSAVEILDDDIYLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLG
Sbjct: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLVTVKKNSEGATDEERGRLEVVGEYHLG 960

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVI
Sbjct: 961  EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVI 1020

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKR
Sbjct: 1021 KGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKR 1080

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1081 VEELTRLH 1088


>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
          Length = 1088

 Score = 2091 bits (5417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1007/1088 (92%), Positives = 1057/1088 (97%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS WNYVVTAHKPT+VTHSCVGNFTSPQELNLI+AKCTRIEIHLLTPQGLQPMLDVP+YG
Sbjct: 1    MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPMYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL+GCAKPTI VL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDHAGL+HLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNAVV++GSSYGDSQL+KLNL PDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAVVFVGSSYGDSQLVKLNLHPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGA+KDGSLRIVRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAFKDGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETR+LAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRVLAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            +EW +P G++VNVATANASQVLLATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPI
Sbjct: 481  DEWHAPAGFTVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHAVLEYEVSCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+YSQ+A+VGMWTDISVRIFSLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GDNPNYSQLASVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF L+  TG+L DRKKVSLGTQPITLRTFSSKN THVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFQLDTTTGQLKDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQ+RTF ICSL NQ+ AEESEMHFVRLLDDQ+FEF+STYPLD FEYGCSILSCSF+DD 
Sbjct: 721  QEQTRTFGICSLGNQTNAEESEMHFVRLLDDQSFEFVSTYPLDAFEYGCSILSCSFADDK 780

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG+VYSLNAFNGKLLAAIN
Sbjct: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGSVYSLNAFNGKLLAAIN 840

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
Sbjct: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWMSAVEILDDDIYLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLG
Sbjct: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLG 960

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVIASLP EQY+FLEKLQ++LRKVI
Sbjct: 961  EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYMFLEKLQSSLRKVI 1020

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKR
Sbjct: 1021 KGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKR 1080

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1081 VEELTRLH 1088


>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
          Length = 1068

 Score = 2087 bits (5407), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1022/1089 (93%), Positives = 1050/1089 (96%), Gaps = 22/1089 (2%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAE+SE+ITRAMGDVSDRIGRPTDNGQ 
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIGRPTDNGQ- 119

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
                                VIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 120  --------------------VIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 159

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPW+QNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 160  YQDNKDARHVKTYEVALKDKDFVEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 219

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA+AFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
Sbjct: 220  SASAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 279

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VY+GSSYGDSQLIK++LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 280  SIASTISYLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 339

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP DTFLVVS
Sbjct: 340  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVS 399

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA+Y+QLVQVTS SVRLV STSRELR
Sbjct: 400  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELR 459

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEWK+P GYSVNVATANA+QVLLATGGGHLVYLEIGDG LTEVKHAQLEY+ISCLDINPI
Sbjct: 460  NEWKAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPI 519

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP++SQ+AAVGMWTDISVRIFSLPDLNLITKE+LGGEIIPRSVLLC+FEGI YLLCAL
Sbjct: 520  GENPNFSQLAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCAL 579

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNFLLNM TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 580  GDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 639

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG+LTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 640  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICH 699

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQSRTFAICSLK NQS  E+SEMHF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD
Sbjct: 700  QEQSRTFAICSLKYNQSSTEDSEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 759

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
Sbjct: 760  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 819

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKWMLRDDGTRELQSE GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
Sbjct: 820  NQKIQLYKWMLRDDGTRELQSESGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 879

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWMSAVEILDDDIYLGAENNFN+FTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 880  AIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 939

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH+QY+FLEKLQ NLRKV
Sbjct: 940  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKV 999

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVGGL+HEQWRSFNNEKKTVDAKNFLDGDLIE+FLDL+RTRMDEISK M VSVEELCK
Sbjct: 1000 IKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCK 1059

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1060 RVEELTRLH 1068


>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
 gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName: Full=UV-damaged
            DNA-binding protein 1a; Short=DDB1a
 gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
 gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
 gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
          Length = 1088

 Score = 2081 bits (5393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1001/1088 (92%), Positives = 1056/1088 (97%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS WNYVVTAHKPT+VTHSCVGNFTSPQELNLI+AKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWD ESSELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL+GCAKPTI VL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LKDKDFVEGPWSQN+LDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVSLKDKDFVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA+AFKAIPIRPSITKAYGRVD DGSRYLLGDHAG++HLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SASAFKAIPIRPSITKAYGRVDVDGSRYLLGDHAGMIHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNAVV++GSSYGDSQL+KLNL PDAKGSYVEVLERY+NLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAVVFVGSSYGDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            +EW +P G++VNVATANASQVLLATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPI
Sbjct: 481  DEWHAPAGFTVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+YSQ+AAVGMWTDISVRIFSLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GDNPNYSQLAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF ++  TG+L DRKKVSLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQ+RTF ICSL NQS +EESEMHFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF++D 
Sbjct: 721  QEQTRTFGICSLGNQSNSEESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDK 780

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAIN
Sbjct: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAIN 840

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGA
Sbjct: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGA 900

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWMSAVEILDDDIYLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLG
Sbjct: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLG 960

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVI
Sbjct: 961  EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVI 1020

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKR
Sbjct: 1021 KGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKR 1080

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1081 VEELTRLH 1088


>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
 gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
 gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
            pigmentation protein 1; AltName: Full=UV-damaged
            DNA-binding protein 1
 gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
 gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
          Length = 1090

 Score = 2075 bits (5377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1009/1090 (92%), Positives = 1055/1090 (96%), Gaps = 2/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGE QD LFIATERYKFCVLQWD E+SE+ITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LKDKDF+EGPW+QNNLDNGA LLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVSLKDKDFIEGPWAQNNLDNGASLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA+AFKAIPIRPSIT+AYGRVDADGSRYLLGDH GLLHLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SASAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA V+IGSSYGDSQL+KLNLQPD KGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS+TDDP+DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETR+LAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSSTSR+L+
Sbjct: 421  FISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLK 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEW +P GYSVNVATANA+QVLLATGGGHLVYLEIGDG+L EVK+A+L+Y+ISCLDINPI
Sbjct: 481  NEWFAPVGYSVNVATANATQVLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP+YS IAAVGMWTDISVRI+SLPDLNLITKE LGGEIIPRSVL+C+FEGISYLLCAL
Sbjct: 541  GENPNYSNIAAVGMWTDISVRIYSLPDLNLITKEQLGGEIIPRSVLMCSFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF+L+M TGELTDRKKVSLGTQPITLRTFSSK+TTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFVLSMSTGELTDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFN AAFPDSLAIAKEGELTIGTID+IQKLHIRSIPLGEH RRI H
Sbjct: 661  LYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISH 720

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQ+RTFA+CS+K  QS A++ EMHFVRLLDDQTFEFISTYPLD FEYGCSILSCSFSDD
Sbjct: 721  QEQTRTFALCSVKYTQSNADDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            SNVYYC+GTAYV+PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  SNVYYCIGTAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDD-GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            NQKIQLYKW  R+D G+RELQ+ECGHHGHILALYVQTRGDFIVVGDLMKSISLLI+KHEE
Sbjct: 841  NQKIQLYKWASREDGGSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEE 900

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER RLEVVGEYH
Sbjct: 901  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYH 960

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH+QYLFLEKLQTNLRK
Sbjct: 961  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRK 1020

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
            VIKGVGGL+HEQWRSF NEKKTVDAKNFLDGDLIESFLDLSR RM+EISK M+V VEEL 
Sbjct: 1021 VIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELM 1080

Query: 1079 KRVEELTRLH 1088
            KRVEELTRLH
Sbjct: 1081 KRVEELTRLH 1090


>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName: Full=UV-damaged
            DNA-binding protein 1
 gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
          Length = 1095

 Score = 2068 bits (5358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1009/1095 (92%), Positives = 1055/1095 (96%), Gaps = 7/1095 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ-----PMLD 55
            MS+WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAKCTRIEIHLLTPQGLQ     PMLD
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQCICLQPMLD 60

Query: 56   VPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPT 115
            VPIYGRIATLELFRPHGE QD LFIATERYKFCVLQWD E+SE+ITRAMGDVSDRIGRPT
Sbjct: 61   VPIYGRIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPT 120

Query: 116  DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP 175
            DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KP
Sbjct: 121  DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEE 235
            TIVVLYQDNKDARHVKTYEV+LKDKDF+EGPW+QNNLDNGA LLIPVPPPLCGVLIIGEE
Sbjct: 181  TIVVLYQDNKDARHVKTYEVSLKDKDFIEGPWAQNNLDNGASLLIPVPPPLCGVLIIGEE 240

Query: 236  TIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIE 295
            TIVYCSA+AFKAIPIRPSIT+AYGRVDADGSRYLLGDH GLLHLLVITHEKEKVTGLKIE
Sbjct: 241  TIVYCSASAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVTGLKIE 300

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
            LLGETSIASTISYLDNA V+IGSSYGDSQL+KLNLQPD KGSYVEVLERYVNLGPIVDFC
Sbjct: 301  LLGETSIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFC 360

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDT 415
            VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS+TDDP+DT
Sbjct: 361  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDT 420

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
            FLVVSFISETR+LAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST
Sbjct: 421  FLVVSFISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSST 480

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCL 535
            SR+L+NEW +P GYSVNVATANA+QVLLATGGGHLVYLEIGDG+L EVK+A+L+Y+ISCL
Sbjct: 481  SRDLKNEWFAPVGYSVNVATANATQVLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCL 540

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY 595
            DINPIGENP+YS IAAVGMWTDISVRI+SLPDLNLITKE LGGEIIPRSVL+C+FEGISY
Sbjct: 541  DINPIGENPNYSNIAAVGMWTDISVRIYSLPDLNLITKEQLGGEIIPRSVLMCSFEGISY 600

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            LLCALGDGHLLNF+L+M TGELTDRKKVSLGTQPITLRTFSSK+TTHVFAASDRPTVIYS
Sbjct: 601  LLCALGDGHLLNFVLSMSTGELTDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYS 660

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 715
            SNKKLLYSNVNLKEVSHMCPFN AAFPDSLAIAKEGELTIGTID+IQKLHIRSIPLGEH 
Sbjct: 661  SNKKLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHA 720

Query: 716  RRICHQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC 774
            RRI HQEQ+RTFA+CS+K  QS A++ EMHFVRLLDDQTFEFISTYPLD FEYGCSILSC
Sbjct: 721  RRISHQEQTRTFALCSVKYTQSNADDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSC 780

Query: 775  SFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 834
            SFSDDSNVYYC+GTAYV+PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK
Sbjct: 781  SFSDDSNVYYCIGTAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 840

Query: 835  LLAAINQKIQLYKWMLRDD-GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            LLAAINQKIQLYKW  R+D G+RELQ+ECGHHGHILALYVQTRGDFIVVGDLMKSISLLI
Sbjct: 841  LLAAINQKIQLYKWASREDGGSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 900

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            +KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER RLEV
Sbjct: 901  FKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEV 960

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
            VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH+QYLFLEKLQ
Sbjct: 961  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQ 1020

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            TNLRKVIKGVGGL+HEQWRSF NEKKTVDAKNFLDGDLIESFLDLSR RM+EISK M+V 
Sbjct: 1021 TNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVP 1080

Query: 1074 VEELCKRVEELTRLH 1088
            VEEL KRVEELTRLH
Sbjct: 1081 VEELMKRVEELTRLH 1095


>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
          Length = 1093

 Score = 2058 bits (5331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 999/1093 (91%), Positives = 1050/1093 (96%), Gaps = 5/1093 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAKCTRIEIHLLT QGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTAQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWD ESSELITRAMGDVSDRIGRPTD+GQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDTESSELITRAMGDVSDRIGRPTDSGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC++PTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV LKDKDFVEGPWSQNNLDNGA +LIPVPPPLCGV+IIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVVLKDKDFVEGPWSQNNLDNGAAVLIPVPPPLCGVIIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA AFKAIP+RPSIT+AYGRVDADGSRYLLGDHAGLLHLLVITHEKE+VTGLKIELLGET
Sbjct: 241  SATAFKAIPVRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKERVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VYIGSSYGDSQL+KLN+QPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYIGSSYGDSQLVKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGF SQ QTLFCHDA++NQLVQVTS SVRLVSST+REL 
Sbjct: 421  FISETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELL 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEW +P  YS+NVATANASQVLLATGGG LV+LEI DG+L E KH QLE+EISCLDINPI
Sbjct: 481  NEWNAPSNYSINVATANASQVLLATGGGVLVHLEICDGLLVEKKHIQLEHEISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+ SQ+AAVGMWTDISVRIFSLPDLNL+TKE LGGEIIPRSVLLC FEGISYLLCAL
Sbjct: 541  GDNPNCSQLAAVGMWTDISVRIFSLPDLNLLTKEQLGGEIIPRSVLLCTFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTG----ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 656
            GDGHLLNF+LN  +     EL DRKKVSLGTQPITLRTFSSKN THVFAASDRPTVIYSS
Sbjct: 601  GDGHLLNFILNTNSNSNSCELMDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSS 660

Query: 657  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPR 716
            NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH R
Sbjct: 661  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHAR 720

Query: 717  RICHQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
            RICHQEQSRTFAICSL+ NQS  E++EMHF+RLLDDQTFE ISTY LDT+EYGCSILSCS
Sbjct: 721  RICHQEQSRTFAICSLRYNQSGTEDTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCS 780

Query: 776  FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
            FSDD+NVYYCVGTAYV+PEENEPTKGRILVF+VE+GKLQLIAEKETKG+VYSLNAFNGKL
Sbjct: 781  FSDDNNVYYCVGTAYVMPEENEPTKGRILVFVVEEGKLQLIAEKETKGSVYSLNAFNGKL 840

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            LAAINQKIQLYKW LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK
Sbjct: 841  LAAINQKIQLYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 900

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 955
            HEEGAIEERARDYNANWMSAVEILDDDIYLGAEN FNLFTVRKNSEGATDEER RLEVVG
Sbjct: 901  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENYFNLFTVRKNSEGATDEERSRLEVVG 960

Query: 956  EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            EYHLGEFVNRF+HGSLVMRLPDSDVGQIPTVIFG+VNGVIGVIASLPH+QY+FLE+LQ+N
Sbjct: 961  EYHLGEFVNRFQHGSLVMRLPDSDVGQIPTVIFGSVNGVIGVIASLPHDQYVFLERLQSN 1020

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            LRKVIKGVGGL+HEQWRSFNNEK+T +AKNFLDGDLIESFLDL+R++M+EIS+ M+VS E
Sbjct: 1021 LRKVIKGVGGLSHEQWRSFNNEKRTAEAKNFLDGDLIESFLDLNRSKMEEISRAMSVSAE 1080

Query: 1076 ELCKRVEELTRLH 1088
            ELCKRVEELTRLH
Sbjct: 1081 ELCKRVEELTRLH 1093


>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine max]
          Length = 1068

 Score = 2049 bits (5308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1002/1089 (92%), Positives = 1041/1089 (95%), Gaps = 22/1089 (2%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MSIWNYVVTAHKPTNVTHSCVGNFTSPQ+LNLIIAKCTRIEIHLL+PQGLQPMLDVPIYG
Sbjct: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQD+LFIATERYKFCVLQWD+E++EL+TRAMGDVSDRIGRPTDNGQ 
Sbjct: 61   RIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETAELVTRAMGDVSDRIGRPTDNGQ- 119

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
                                VIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 120  --------------------VIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 159

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDF+EGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 160  YQDNKDARHVKTYEVALKDKDFLEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 219

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDH GLL LLVITHEKEKVTGLKIE LGET
Sbjct: 220  SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKIEPLGET 279

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VYIGSSYGDSQLIKLNLQPDAKGSYVE LERYVNLGPIVDFCVVDLE
Sbjct: 280  SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLE 339

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
Sbjct: 340  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 399

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA++NQLVQVTS SVRLVSST+RELR
Sbjct: 400  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELR 459

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEW +P GYSVNVATANA+QVLLATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPI
Sbjct: 460  NEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI 519

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP++S +AAVGMWTDISVRIFSLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 520  GENPNHSHLAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 579

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF+LN  TGEL DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 580  GDGHLLNFMLNTSTGELADRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 639

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 640  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH 699

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQSRTFAICSLK N +  E+SEMHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD
Sbjct: 700  QEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD 759

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +NVYYCVGTAYVLPEENEPTKGRILVF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAI
Sbjct: 760  NNVYYCVGTAYVLPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI 819

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKW+LRDDGT ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
Sbjct: 820  NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 879

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWMSAVEI+DDDIYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 880  AIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 939

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKV
Sbjct: 940  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV 999

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVGGL+HEQWRSFNNEKKTV+A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCK
Sbjct: 1000 IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKALDVSVEELCK 1059

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1060 RVEELTRLH 1068


>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine max]
          Length = 1068

 Score = 2045 bits (5297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 999/1089 (91%), Positives = 1041/1089 (95%), Gaps = 22/1089 (2%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            M+IWNYVVTAHKPTNVTHSCVGNFTSPQ+LNLIIAKCTRIEIHLL+PQGLQPMLDVPIYG
Sbjct: 1    MTIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQD+LFIATERYKFCVLQWD+E+ EL+TRAMGDVSDRIGRPTDNGQ 
Sbjct: 61   RIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETGELVTRAMGDVSDRIGRPTDNGQ- 119

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
                                VIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 120  --------------------VIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 159

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 160  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 219

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDH GL+ LLVI HEKEKVTGLKIE LGET
Sbjct: 220  SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLVSLLVIIHEKEKVTGLKIEPLGET 279

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VY+GSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 280  SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 339

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
Sbjct: 340  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 399

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA++NQLVQVTS SVRLVSST+R+LR
Sbjct: 400  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLR 459

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEW +P GYSVNVATANA+QVLLATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPI
Sbjct: 460  NEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI 519

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP++S +AAVGMWTDISVRIFSLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 520  GENPNHSNLAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 579

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF+LN  TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 580  GDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 639

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 640  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH 699

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQSRTFAICSLK N +  E+SEMHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD
Sbjct: 700  QEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD 759

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +NVYYCVGTAYVLPEENEPTKGRI+VF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAI
Sbjct: 760  NNVYYCVGTAYVLPEENEPTKGRIIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI 819

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKW+LRDDGT ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
Sbjct: 820  NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 879

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWMSAVEI+DDDIYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 880  AIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 939

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKV
Sbjct: 940  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV 999

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVGGL+HEQWRSFNNEKKTV+A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCK
Sbjct: 1000 IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKAVDVSVEELCK 1059

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1060 RVEELTRLH 1068


>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
 gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
          Length = 1171

 Score = 2038 bits (5280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1008/1171 (86%), Positives = 1051/1171 (89%), Gaps = 83/1171 (7%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MSIWNYVVTAHKPTNVTHSCVGNFTSPQ+LNLI+AKCTRIEIHLLT QGLQ +LDVP+YG
Sbjct: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLILAKCTRIEIHLLTAQGLQSILDVPLYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGE QDFLFIATERYKFCVLQWD E SEL+TR+MGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGETQDFLFIATERYKFCVLQWDTEKSELVTRSMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPWSQN+LDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SAN FKAIPIR +ITKAYGRVD DGSRYLLGDH GLL LLVITHEKEKVTGLKIE LGET
Sbjct: 241  SANGFKAIPIRAAITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKIEPLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VYIGSSYGDSQLIKLNLQPD KGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDPKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQAS--------------------------- 393
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQ S                           
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQVSPLFSCLSVGSFTQDTTKRKRFFFFLII 420

Query: 394  ---VELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 450
               +ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ QT
Sbjct: 421  NNTLELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQT 480

Query: 451  LFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ---------- 500
            LFCHDA++NQLVQVTS SVRLVSS++REL NEW +P  YSVNVATANA+Q          
Sbjct: 481  LFCHDAVHNQLVQVTSNSVRLVSSSTRELLNEWHAPSDYSVNVATANATQSQNHFIFQIS 540

Query: 501  ------------------------------------------VLLATGGGHLVYLEIGDG 518
                                                      VLLATGGGHLVYLEIGDG
Sbjct: 541  SPSLSHGNIMICLSCKDVDNWSSTSSSLSLIYRVLFLLVAASVLLATGGGHLVYLEIGDG 600

Query: 519  ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 578
            IL EVKHAQLEYEISCLDINPIGENP+ SQ+AAVGMWTDISVR+FSLP+LNLITKEHLGG
Sbjct: 601  ILQEVKHAQLEYEISCLDINPIGENPNQSQLAAVGMWTDISVRLFSLPELNLITKEHLGG 660

Query: 579  EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            EIIPRSVLLCAFEGISYLLCALGDGHLLNF+LN  TGELTDRKKVSLGTQPITLRTFSSK
Sbjct: 661  EIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSK 720

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI
Sbjct: 721  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 780

Query: 699  DDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFI 757
            DDIQKLHIR+IPLGEH RRICHQEQ+RTFAICSLK N + AEESEMHFVRLLDDQTF+FI
Sbjct: 781  DDIQKLHIRTIPLGEHARRICHQEQTRTFAICSLKYNSASAEESEMHFVRLLDDQTFDFI 840

Query: 758  STYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIA 817
            S YPLDT+EYGC I+SCSFSDD+NVYYCVGTAYVLPEENEPTKGRILVF VE+GKLQL+A
Sbjct: 841  SVYPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGRILVFSVEEGKLQLVA 900

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 877
            EKETKGAVY LNAFNGKLLAAINQKIQLYKW+LR+DGTRELQSECGHHGHILALYVQTRG
Sbjct: 901  EKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLREDGTRELQSECGHHGHILALYVQTRG 960

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 937
            DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD+YLGAEN+FNLFTVR
Sbjct: 961  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGAENSFNLFTVR 1020

Query: 938  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 997
            KNSEGATDEERGRLEV GEYHLGEF+NRFRHGSLVMRLPDSDVGQIPTVIFGT+NGVIGV
Sbjct: 1021 KNSEGATDEERGRLEVAGEYHLGEFINRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGV 1080

Query: 998  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
            IASLPHEQY+FLEKLQ+NLRKVIKGVGGL+HEQWRSFNNEKKTV+A+NFLDGDLIESFLD
Sbjct: 1081 IASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLD 1140

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            L R++MDEISK M VSVEEL KRVEELTRLH
Sbjct: 1141 LKRSKMDEISKAMEVSVEELAKRVEELTRLH 1171


>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1088

 Score = 2035 bits (5272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 979/1088 (89%), Positives = 1042/1088 (95%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNY VTA KPT VTHSCVGNFTSPQELNLI+AK TRIEIHLL+PQGLQ +LDVP+YG
Sbjct: 1    MSVWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLF+ATERYKFCVLQWD ESSELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTI VL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCTKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LK+KDFVEGPWSQNNLDNGADLLIPVP PLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVSLKEKDFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDH+GL+HLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDLDGSRYLLGDHSGLIHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIAS+ISYLDNAVV++GSSYGDSQLIKLNLQPDA GSYVE+LE+YVNLGPIVDFCVVDLE
Sbjct: 301  SIASSISYLDNAVVFVGSSYGDSQLIKLNLQPDATGSYVEILEKYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN+EDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRILAMNIEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            N+W +P G++VNVATANASQVLLATGGGHLVYLEIGDG LTEVKH  LEYE+SCLDINPI
Sbjct: 481  NKWDAPAGFAVNVATANASQVLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+YSQ+AAVG+WTDISVRIF LPDL LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GDNPNYSQLAAVGLWTDISVRIFVLPDLTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF L+  +G+L DRKKVSLGTQPITLRTFSSK+ THVFAASDRP VIYS+NKKL
Sbjct: 601  GDGHLLNFQLDTSSGKLRDRKKVSLGTQPITLRTFSSKSATHVFAASDRPAVIYSNNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IP+GEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICH 720

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQ+RTFAIC L+NQ  AEESEMHFVRLLD Q+FEF+STYPLD FEYGCSILSCSF+DD 
Sbjct: 721  QEQTRTFAICCLRNQPSAEESEMHFVRLLDAQSFEFLSTYPLDAFEYGCSILSCSFTDDK 780

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVE+G+LQLI EKETKGAVYSLNAFNGKLLAAIN
Sbjct: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLAAIN 840

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
Sbjct: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWM+AVEILDDDIYLGA+N FNLFTV+KN+EGATDEER R+EVVGEYH+G
Sbjct: 901  IEERARDYNANWMAAVEILDDDIYLGADNCFNLFTVKKNNEGATDEERARMEVVGEYHIG 960

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVMRLPDS++GQIPTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVI
Sbjct: 961  EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVI 1020

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEK+T +AK++LDGDLIESFLDLSR +M+EISK M+V VEELCKR
Sbjct: 1021 KGVGGLSHEQWRSFNNEKRTAEAKSYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKR 1080

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1081 VEELTRLH 1088


>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score = 2029 bits (5257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1000/1089 (91%), Positives = 1025/1089 (94%), Gaps = 47/1089 (4%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAE+SE+ITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPW+QNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA+AFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SASAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNA VY+GSSYGDSQLIK++LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA+Y+QLVQVTS SVRLV STSRELR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEWK+P GYSVNVATANA+QVLLATGGGHLVYLEIGDG LTEVKHAQLEY+ISCLDINPI
Sbjct: 481  NEWKAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP++SQ+AAVGMWTDISVRIFSLPDLNLITKE+LGGEIIPRSVLLC+FEGI YLLCAL
Sbjct: 541  GENPNFSQLAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNFLLNM TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG+LTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 721  QEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            QEQSRTFAICSLK NQS  E+SEMHF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD
Sbjct: 721  QEQSRTFAICSLKYNQSSTEDSEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKWMLRDDGTRELQSE GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
Sbjct: 841  NQKIQLYKWMLRDDGTRELQSESGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 900

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWMSAVEILDDDIYLGAENNFN+FTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 960

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH+QY+FLEKLQ NLRKV
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKV 1020

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKG                                               M VSVEELCK
Sbjct: 1021 IKG----------------------------------------------AMAVSVEELCK 1034

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1035 RVEELTRLH 1043


>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
 gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
          Length = 1067

 Score = 2026 bits (5250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 980/1088 (90%), Positives = 1035/1088 (95%), Gaps = 21/1088 (1%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS WNYVVTAHKPT+VTHSCVGNFTSPQELNLI+AKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPHGEAQDFLFIATERYKFCVLQWD ESSELITRAMGDVSDRIGRPTDNGQ 
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELITRAMGDVSDRIGRPTDNGQ- 119

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
                                VIPFDNKGQLKEAFNIRLEELQVLDIKFL+GCAKPTI VL
Sbjct: 120  --------------------VIPFDNKGQLKEAFNIRLEELQVLDIKFLFGCAKPTIAVL 159

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LKDKDFVEGPWSQN+LDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 160  YQDNKDARHVKTYEVSLKDKDFVEGPWSQNSLDNGADLLIPVPPPLCGVLIIGEETIVYC 219

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA+AFKAIPIRPSITKAYGRVD DGSRYLLGDHAG++HLLVITHEKEKVTGLKIELLGET
Sbjct: 220  SASAFKAIPIRPSITKAYGRVDVDGSRYLLGDHAGMIHLLVITHEKEKVTGLKIELLGET 279

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNAVV++GSSYGDSQL+KLNL PDAKGSYVEVLERY+NLGPIVDFCVVDLE
Sbjct: 280  SIASTISYLDNAVVFVGSSYGDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLE 339

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVS
Sbjct: 340  RQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS 399

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR
Sbjct: 400  FISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 459

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            +EW +P G++VNVATANASQVLLATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPI
Sbjct: 460  DEWHAPAGFTVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPI 519

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+YSQ+AAVGMWTDISVRIFSLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 520  GDNPNYSQLAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 579

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF ++  TG+L DRKKVSLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKL
Sbjct: 580  GDGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKL 639

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICH
Sbjct: 640  LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICH 699

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQ+RTF ICSL NQS +EESEMHFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF++D 
Sbjct: 700  QEQTRTFGICSLGNQSNSEESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDK 759

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAIN
Sbjct: 760  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAIN 819

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGA
Sbjct: 820  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGA 879

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWMSAVEILDDDIYLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLG
Sbjct: 880  IEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLG 939

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVI
Sbjct: 940  EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVI 999

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKR
Sbjct: 1000 KGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKR 1059

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1060 VEELTRLH 1067


>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
 gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName: Full=UV-damaged
            DNA-binding protein 1b; Short=DDB1b
 gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
 gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
          Length = 1088

 Score = 2015 bits (5220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 969/1088 (89%), Positives = 1036/1088 (95%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNY VTA KPT VTHSCVGNFTSPQELNLI+AK TRIEIHLL+PQGLQ +LDVP+YG
Sbjct: 1    MSVWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIAT+ELFRPHGEAQDFLF+ATERYKFCVLQWD ESSELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATMELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCR+IGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTI VL
Sbjct: 121  GIIDPDCRVIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCTKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LKDK+FVEGPWSQNNLDNGADLLIPVP PLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVSLKDKNFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDHAGL+HLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDLDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIAS+ISYLDNAVV++GSSYGDSQLIKLNLQPDAKGSYVE+LE+YVNLGPIVDFCVVDLE
Sbjct: 301  SIASSISYLDNAVVFVGSSYGDSQLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN+EDELEETEIEGF S+ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            N+W +P G+SVNVATANASQVLLATGGGHLVYLEIGDG LTEVKH  LEYE+SCLDINPI
Sbjct: 481  NKWDAPAGFSVNVATANASQVLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+YSQ+AAVGMWTDISVRIF LPDL LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GDNPNYSQLAAVGMWTDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF L+   G+L DRKKVSLGT+PITLRTFSSK+ THVFAASDRP VIYS+NKKL
Sbjct: 601  GDGHLLNFQLDTSCGKLRDRKKVSLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IP+GEH RRICH
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICH 720

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQ+RTFAI  L+N+  AEESE HFVRLLD Q+FEF+S+YPLD FE GCSILSCSF+DD 
Sbjct: 721  QEQTRTFAISCLRNEPSAEESESHFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDK 780

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVE+G+LQLI EKETKGAVYSLNAFNGKLLA+IN
Sbjct: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASIN 840

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI VGDLMKSISLLIYKHEEGA
Sbjct: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGA 900

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWM+AVEIL+DDIYLG +N FN+FTV+KN+EGATDEER R+EVVGEYH+G
Sbjct: 901  IEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHIG 960

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVM+LPDSD+GQIPTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVI
Sbjct: 961  EFVNRFRHGSLVMKLPDSDIGQIPTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVI 1020

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEK+T +AK +LDGDLIESFLDLSR +M+EISK M+V VEELCKR
Sbjct: 1021 KGVGGLSHEQWRSFNNEKRTAEAKGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKR 1080

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1081 VEELTRLH 1088


>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
          Length = 1088

 Score = 2013 bits (5216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 968/1088 (88%), Positives = 1036/1088 (95%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNY VTA KPT VTHSCVGNFTSPQELNLI+AK TRIEIHLL+PQGLQ +LDVP+YG
Sbjct: 1    MSVWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIAT+ELFRPHGEAQDFLF+ATERYKFCVLQWD ESSELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATMELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCR+IGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTI VL
Sbjct: 121  GIIDPDCRVIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCTKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV+LKDK+FVEGPWSQNNLDNGADLLIPVP PLCGVLIIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVSLKDKNFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYC 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSITKAYGRVD DGSRYLLGDHAGL+HLLVITHEKEKVTGLKIELLGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDLDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIAS+ISYLDNAVV++GSSYGDSQLIKLNLQPDAKGSYVE+LE+YVNLGPIVDFCVVDLE
Sbjct: 301  SIASSISYLDNAVVFVGSSYGDSQLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN+EDELEETEIEGF S+ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR
Sbjct: 421  FISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELR 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            N+W +P G+SVNVATANASQVLLATGGGHLVYLEIGDG LTEVKH  LEYE+SCLDINPI
Sbjct: 481  NKWDAPAGFSVNVATANASQVLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP+YSQ+AAVGMWTDISVRIF LPDL LITKE LGGEIIPRSVLLCAFEGISYLLCAL
Sbjct: 541  GDNPNYSQLAAVGMWTDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNF L+   G+L DRKKVSLGT+PITLRTFSSK+ THVFAASDRP VIYS+NKKL
Sbjct: 601  GDGHLLNFQLDTSCGKLRDRKKVSLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNV+LKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IP+GEH RRICH
Sbjct: 661  LYSNVSLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICH 720

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQ+RTFAI  L+N+  AEESE HFVRLLD Q+FEF+S+YPLD FE GCSILSCSF+DD 
Sbjct: 721  QEQTRTFAISCLRNEPSAEESESHFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDK 780

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            NVYYCVGTAYVLPEENEPTKGRILVFIVE+G+LQLI EKETKGAVYSLNAFNGKLLA+IN
Sbjct: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASIN 840

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI VGDLMKSISLLIYKHEEGA
Sbjct: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGA 900

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWM+AVEIL+DDIYLG +N FN+FTV+KN+EGATDEER R+EVVGEYH+G
Sbjct: 901  IEERARDYNANWMAAVEILNDDIYLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHIG 960

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVM+LPDSD+GQIPTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVI
Sbjct: 961  EFVNRFRHGSLVMKLPDSDIGQIPTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVI 1020

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEK+T +AK +LDGDLIESFLDLSR +M+EISK M+V VEELCKR
Sbjct: 1021 KGVGGLSHEQWRSFNNEKRTAEAKGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKR 1080

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1081 VEELTRLH 1088


>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
 gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
          Length = 1102

 Score = 1950 bits (5051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 948/1102 (86%), Positives = 1019/1102 (92%), Gaps = 14/1102 (1%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNY VTA KPT VTHSCVGNFTSPQELNLI+AK TRIEIHLL+PQGLQ +LDVP+YG
Sbjct: 1    MSVWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYG 60

Query: 61   RIATLELFRPHGEA----QDFLFIATERYKFCVLQWDAESS----------ELITRAMGD 106
            RIAT+ELFRPH         FL +  +   FC+LQ    +S           L+  AMGD
Sbjct: 61   RIATMELFRPHVSIVFLLNTFLCLRVKHKTFCLLQLKDINSVFFNGIMSPLSLLQGAMGD 120

Query: 107  VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDI 166
            VSDRIGRPTDNGQIGIIDPDCR+IGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDI
Sbjct: 121  VSDRIGRPTDNGQIGIIDPDCRVIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDI 180

Query: 167  KFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPL 226
            KFLYGC KPTI VLYQDNKDARHVKTYEV+LKDK+FVEGPWSQNNLDNGADLLIPVP PL
Sbjct: 181  KFLYGCTKPTIAVLYQDNKDARHVKTYEVSLKDKNFVEGPWSQNNLDNGADLLIPVPSPL 240

Query: 227  CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK 286
            CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVD DGSRYLLGDHAGL+HLLVITHEK
Sbjct: 241  CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDLDGSRYLLGDHAGLIHLLVITHEK 300

Query: 287  EKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYV 346
            EKVTGLKIELLGETSIAS+ISYLDNAVV++GSSYGDSQLIKLNLQPDAKGSYVE+LE+YV
Sbjct: 301  EKVTGLKIELLGETSIASSISYLDNAVVFVGSSYGDSQLIKLNLQPDAKGSYVEILEKYV 360

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 406
            NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL+
Sbjct: 361  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLK 420

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
            SS D+ FDTFLVVSFISETRILAMN+EDELEETEIEGF S+ QTLFCHDA+YNQLVQVTS
Sbjct: 421  SSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTS 480

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA 526
             SVRLVSST+RELRN+W +P G+SVNVATANASQVLLATGGGHLVYLEIGDG LTEVKH 
Sbjct: 481  NSVRLVSSTTRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVYLEIGDGTLTEVKHV 540

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL 586
             LEYE+SCLDINPIG+NP+YSQ+AAVGMWTDISVRIF LPDL LITKE LGGEIIPRSVL
Sbjct: 541  LLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIFVLPDLTLITKEELGGEIIPRSVL 600

Query: 587  LCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
            LCAFEGISYLLCALGDGHLLNF L+   G+L DRKKVSLGT+PITLRTFSSK+ THVFAA
Sbjct: 601  LCAFEGISYLLCALGDGHLLNFQLDTSCGKLRDRKKVSLGTRPITLRTFSSKSATHVFAA 660

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 706
            SDRP VIYS+NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHI
Sbjct: 661  SDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHI 720

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFE 766
            R+IP+GEH RRICHQEQ+RTFAI  L+N+  AEESE HFVRLLD Q+FEF+S+YPLD FE
Sbjct: 721  RTIPIGEHARRICHQEQTRTFAISCLRNEPSAEESESHFVRLLDAQSFEFLSSYPLDAFE 780

Query: 767  YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVY 826
             GCSILSCSF+DD NVYYCVGTAYVLPEENEPTKGRILVFIVE+G+LQLI EKETKGAVY
Sbjct: 781  CGCSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRILVFIVEEGRLQLITEKETKGAVY 840

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 886
            SLNAFNGKLLA+INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI VGDLM
Sbjct: 841  SLNAFNGKLLASINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIAVGDLM 900

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 946
            KSISLLIYKHEEGAIEERARDYNANWM+AVEIL+DDIYLG +N FN+FTV+KN+EGATDE
Sbjct: 901  KSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKNNEGATDE 960

Query: 947  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 1006
            ER R+EVVGEYH+GEFVNRFRHGSLVM+LPDSD+GQIPTVIFGTV+G+IGVIASLP EQY
Sbjct: 961  ERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQIPTVIFGTVSGMIGVIASLPQEQY 1020

Query: 1007 LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
             FLEKLQT+LRKVIKGVGGL+HEQWRSFNNEK+T +AK +LDGDLIESFLDLSR +M+EI
Sbjct: 1021 AFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEAKGYLDGDLIESFLDLSRGKMEEI 1080

Query: 1067 SKTMNVSVEELCKRVEELTRLH 1088
            SK M+V VEELCKRVEELTRLH
Sbjct: 1081 SKGMDVQVEELCKRVEELTRLH 1102


>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
          Length = 1089

 Score = 1918 bits (4969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 919/1089 (84%), Positives = 1007/1089 (92%), Gaps = 1/1089 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPT+V+HSCVGNFTSP +LNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIAT+ELFRPH E QDFLFIATERYKFCVLQWDAE SELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATIELFRPHNETQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL+GCAKPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCAKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKD RHVKTYEVALKDKDFVEGPWSQNN+DNGA LLIPVP PL GV+IIGEE IVYC
Sbjct: 181  YQDNKDVRHVKTYEVALKDKDFVEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYC 240

Query: 241  SANA-FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
            +AN+ FKAIPI+ SI +AYGRVD DGSRYLLGD+ G+LHLLV+THE+E+VTGLKIE LGE
Sbjct: 241  NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIEYLGE 300

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            TSIAS+ISYLDN VVY+GS +GDSQL+KLNLQ DA GS+VE+LERYVNLGPIVDFCVVDL
Sbjct: 301  TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDL 360

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
            +RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKG+WSL+SS +DPFD +LVV
Sbjct: 361  DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSINDPFDMYLVV 420

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SFISETR LAMN+EDELEETEIEGF +QTQTLFC +AI + L+QVT+ SVRLVS TSREL
Sbjct: 421  SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL 480

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
             N+W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKHAQLE+EISCLD+NP
Sbjct: 481  VNQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLDLNP 540

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
            IGENP YS +AAVGMWTDISVRIFSLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCA
Sbjct: 541  IGENPQYSSLAAVGMWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA 600

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            LGDG+L +FLLN  TGELTDRKKV+LGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKK
Sbjct: 601  LGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK 660

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            LLYSNVNLKEV+HMCPFN+AAFPDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRIC
Sbjct: 661  LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC 720

Query: 720  HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            HQEQSRT A CS K     EESE H +RLLD QTFE +  YPLD +E GCSI+SCSF+DD
Sbjct: 721  HQEQSRTLAFCSFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFADD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            SNVYYCVGTAYV+PEENEPTKGRILVF VEDG LQLI EKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  SNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKWM R+DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE 
Sbjct: 841  NQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES 900

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEERARDYNANWM+AVE+LDD++Y+GAEN++NLFTVRKNS+ ATD+ER RLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKNSDAATDDERARLEVVGEYHL 960

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNRFRHGSLVMRLPDSD+GQIPTVIFGT+NGVIG+IASLPH+QY+FLEKLQ+ L K 
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDIGQIPTVIFGTINGVIGIIASLPHDQYIFLEKLQSTLVKY 1020

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVG L+HEQWRSF+N+KKT +A+NFLDGDLIESFLDLSR++M+E+SK M V VEEL K
Sbjct: 1021 IKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSK 1080

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
 gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
 gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
 gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
          Length = 1090

 Score = 1916 bits (4964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 923/1090 (84%), Positives = 1009/1090 (92%), Gaps = 2/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPT+VTHSCVGNFT P +LNLI+AKCTRIEIHLLTPQGLQPM+DVPIYG
Sbjct: 1    MSVWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQGLQPMIDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPH E QDFLFIATERYKFCVLQWD E SEL+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA LLIPVP PL GV+IIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC 240

Query: 241  SANA-FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
            +AN+ F+AIPI+ SI +AYGRVD DGSRYLLGD+AG+LHLLV+THE+E+VTGLKIE LGE
Sbjct: 241  NANSTFRAIPIKQSIIRAYGRVDPDGSRYLLGDNAGILHLLVLTHERERVTGLKIEYLGE 300

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            TSIAS+ISYLDN VVY+GS +GDSQL+KLNLQ D  GSYVEVLERYVNLGPIVDFCVVDL
Sbjct: 301  TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDL 360

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
            +RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKG+WSL+SS +DP+D +LVV
Sbjct: 361  DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV 420

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SFISETR LAMN+EDELEETEIEGF +QTQTLFC +AI + L+QVT+ SVRLVS TSREL
Sbjct: 421  SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL 480

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
             ++W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKH QLE+EISC+D+NP
Sbjct: 481  VDQWNAPEGFSVNVASANASQVLLATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNP 540

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
            IGENP YS +AAVGMWTDISVRI SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCA
Sbjct: 541  IGENPQYSSLAAVGMWTDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA 600

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            LGDGHL +FLLN  TGELTDRKKVSLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKK
Sbjct: 601  LGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK 660

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            LLYSNVNLKEV+HMCPFN+AA PDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRIC
Sbjct: 661  LLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC 720

Query: 720  HQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            HQEQSRT A CS K NQ+  EESE HFVRLLD QTFEF+S Y LD +E+GCSI+SCSFSD
Sbjct: 721  HQEQSRTLAFCSFKHNQTSIEESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSD 780

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            D+NVYYCVGTAYVLPEENEP+KGRILVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAA
Sbjct: 781  DNNVYYCVGTAYVLPEENEPSKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAA 840

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            INQKIQLYKWMLR+DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE
Sbjct: 841  INQKIQLYKWMLREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEE 900

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             AIEE ARDYNANWMSAVE+LDD+IY+GAENN+N+FTVRKNS+ ATDEERGRLEVVGEYH
Sbjct: 901  SAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYH 960

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEFVNR RHGSLVMRLPDS++GQIPTVIFGT+NGVIG+IASLPHEQY+FLEKLQ+ L K
Sbjct: 961  LGEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVK 1020

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
             IKGVG L+HEQWRSF+N+KKT +A+NFLDGDLIESFLDLSR +M+E++K M V VEEL 
Sbjct: 1021 FIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELS 1080

Query: 1079 KRVEELTRLH 1088
            KRVEELTRLH
Sbjct: 1081 KRVEELTRLH 1090


>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
          Length = 1090

 Score = 1912 bits (4954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 921/1090 (84%), Positives = 1007/1090 (92%), Gaps = 2/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPT+VTHSCVGNFT P +LNLI+AKCTRIEIHLLTPQGLQPM+DVPIYG
Sbjct: 1    MSVWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQGLQPMIDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPH E QDFLFIATERYKFCVLQWD E SEL+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA LLIPVP PL GV+IIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC 240

Query: 241  SANA-FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
            +AN+ F+AIPI+ SI +AYGRVD DGSRYLLGD+AG+LHLLV+THE+E+VTGLKIE LGE
Sbjct: 241  NANSTFRAIPIKQSIIRAYGRVDPDGSRYLLGDNAGILHLLVLTHERERVTGLKIEYLGE 300

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            TSIAS+ISYLDN VVY+GS +GDSQL+KLNLQ D  GSYVEVLERYVNLGPIVDFCVVDL
Sbjct: 301  TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDL 360

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
            +RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKG+WSL+SS +DP+D +LVV
Sbjct: 361  DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV 420

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SFISETR LAMN+EDELEETEIEGF +QTQTLFC +AI + L+QVT+ SVRLVS TSREL
Sbjct: 421  SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL 480

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
             ++W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKH QLE+EISC+D+NP
Sbjct: 481  VDQWNAPEGFSVNVASANASQVLLATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNP 540

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
            IGENP YS +AAVGMWTDISVRI S PDL LI KE+LGGEI+PRSVLLC  EG+SYLLCA
Sbjct: 541  IGENPQYSSLAAVGMWTDISVRILSFPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA 600

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            LGDGHL +FLLN  TGELTDRKKVSLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKK
Sbjct: 601  LGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK 660

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            LLYSNVNLKEV+HMCPFN+AA PDSLAIAKEGEL+IGTIDDIQKLHIR+IPL    RRIC
Sbjct: 661  LLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLDHQTRRIC 720

Query: 720  HQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            HQEQSRT A CS K NQ+  EESE HFVRLLD QTFEF+S Y LD +E+GCSI+SCSFSD
Sbjct: 721  HQEQSRTLAFCSFKHNQTSIEESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSD 780

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            D+NVYYCVGTAYVLPEENEP+KGRILVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAA
Sbjct: 781  DNNVYYCVGTAYVLPEENEPSKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAA 840

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            INQKIQLYKWMLR+DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE
Sbjct: 841  INQKIQLYKWMLREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEE 900

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             AIEE ARDYNANWMSAVE+LDD+IY+GAENN+N+FTVRKNS+ ATDEERGRLEVVGEYH
Sbjct: 901  SAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYH 960

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEF NRFRHGSLVMRLPDS++GQIPTVIFGT+NGVIG+IASLPHEQY+FLEKLQ+ L K
Sbjct: 961  LGEFGNRFRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVK 1020

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
             IKGVG L+HEQWRSF+N+KKT +A+NFLDGDLIESFLDLSR +M+E++K M V VEEL 
Sbjct: 1021 FIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELS 1080

Query: 1079 KRVEELTRLH 1088
            KRVEELTRLH
Sbjct: 1081 KRVEELTRLH 1090


>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
 gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
          Length = 1033

 Score = 1905 bits (4936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 957/1088 (87%), Positives = 990/1088 (90%), Gaps = 55/1088 (5%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MSIWNYVVTA KPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSIWNYVVTAQKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELF                                            RP    Q 
Sbjct: 61   RIATLELF--------------------------------------------RPHGEAQ- 75

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
                 D   I    Y   F V+ +D +         RLEELQVLDIKFLYGC+KPTIVVL
Sbjct: 76   -----DFLFIATERYK--FCVLQWDAE---TSELITRLEELQVLDIKFLYGCSKPTIVVL 125

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDF EGPW+QNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
Sbjct: 126  YQDNKDARHVKTYEVALKDKDFGEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 185

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SANAFKAIPIRPSIT+AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
Sbjct: 186  SANAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 245

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLDNAVVYIGSSYGDSQL+KLNLQPDAKGSYVEVLE YVNLGPIVDFCVVDLE
Sbjct: 246  SIASTISYLDNAVVYIGSSYGDSQLVKLNLQPDAKGSYVEVLESYVNLGPIVDFCVVDLE 305

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
Sbjct: 306  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 365

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMNLEDELEETEIEGFCSQ QTLFCH A+YNQLVQVTS SVRLVSST+REL+
Sbjct: 366  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHYAVYNQLVQVTSSSVRLVSSTTRELQ 425

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            NEW +P GYS+NVATANA+QVLLATGGGHLVYLEIGDG LT  KHAQLE EISCLDINPI
Sbjct: 426  NEWHAPAGYSINVATANATQVLLATGGGHLVYLEIGDGTLTHTKHAQLECEISCLDINPI 485

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP+YSQ+AAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLC+FEGISYLLCAL
Sbjct: 486  GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCSFEGISYLLCAL 545

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHLLNFLLN+ TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 546  GDGHLLNFLLNLNTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 605

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICH
Sbjct: 606  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH 665

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQSRTFA+CSLKNQ+ AEESE HF+RLLDDQTFEFISTY LD FEYGCSILSCSFSDD+
Sbjct: 666  QEQSRTFAVCSLKNQASAEESETHFIRLLDDQTFEFISTYQLDPFEYGCSILSCSFSDDN 725

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            N+YYCVGTAYV+PEENEPTKGRILVF+VEDGKLQ+I EKETKGAVYSLN+FNGKLLAAIN
Sbjct: 726  NLYYCVGTAYVMPEENEPTKGRILVFLVEDGKLQVITEKETKGAVYSLNSFNGKLLAAIN 785

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKIQLYKWMLRDDG+RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
Sbjct: 786  QKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 845

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
Sbjct: 846  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 905

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY+FLEKLQ+NLR+VI
Sbjct: 906  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYIFLEKLQSNLRRVI 965

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            KGVGGL+HEQWRSFNNEKKTV+AKNFLDGDLIESFLDLSR RMDEISK + VSVEELCKR
Sbjct: 966  KGVGGLSHEQWRSFNNEKKTVEAKNFLDGDLIESFLDLSRNRMDEISKAIGVSVEELCKR 1025

Query: 1081 VEELTRLH 1088
            VEELTRLH
Sbjct: 1026 VEELTRLH 1033


>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
            distachyon]
          Length = 1090

 Score = 1891 bits (4899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 908/1090 (83%), Positives = 1008/1090 (92%), Gaps = 2/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS WNYVVTAHKPT+V+HSCVGNFTS  +LNLI+AKCTRIEIHLLTPQG+QP+LDVPIYG
Sbjct: 1    MSTWNYVVTAHKPTSVSHSCVGNFTSNTQLNLIVAKCTRIEIHLLTPQGIQPLLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIAT+ELFRP  EAQDFLFIATERYKFCVLQWDAE SELITR++GDVSDRIGRPTDNGQI
Sbjct: 61   RIATIELFRPPTEAQDFLFIATERYKFCVLQWDAEKSELITRSVGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC +PTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCLRPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA LLIPVP PL GV+IIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC 240

Query: 241  SANA-FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
            +AN+ FKAIPI+ SI +AYGRVD DGSRYLLGD+ G+LHLLV+T E+E+VTGLKIE LGE
Sbjct: 241  NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTQERERVTGLKIEHLGE 300

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            TS+AS+ISYLDN VVY+GS +GDSQL+KLNLQ DA GS+VEVLERYVNLGPIVDFCVVDL
Sbjct: 301  TSVASSISYLDNGVVYVGSRFGDSQLVKLNLQADATGSFVEVLERYVNLGPIVDFCVVDL 360

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
            +RQGQGQVVTCSGA+KDGS+R+VRNGIGINEQASVELQGIKG+WSL+SS +DP+DTFLVV
Sbjct: 361  DRQGQGQVVTCSGAFKDGSIRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDTFLVV 420

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SFISETR LAMN+EDELEETEIEGF +Q QTLFC +AI + L+QVT+ SVRLVS  SREL
Sbjct: 421  SFISETRFLAMNMEDELEETEIEGFDAQIQTLFCQNAISDLLIQVTANSVRLVSCASREL 480

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
             + W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKHAQLE+EISC+D+NP
Sbjct: 481  VDHWNAPDGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCVDLNP 540

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
            IGENP YS +AA+GMWTDISV + SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCA
Sbjct: 541  IGENPQYSSLAAIGMWTDISVSLLSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA 600

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            LGDGHL +FLLN+ TGELTD+KKVSLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKK
Sbjct: 601  LGDGHLFSFLLNVSTGELTDKKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK 660

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            LLYSNVNLKEV+HMCPFN+AAFPDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRIC
Sbjct: 661  LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC 720

Query: 720  HQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            HQEQSRT A CS K N +  EESE HF+RLLD QTFEF+ST+PLD +E GCS++SCSFSD
Sbjct: 721  HQEQSRTLAFCSFKYNPNSMEESEAHFIRLLDHQTFEFLSTHPLDQYECGCSMISCSFSD 780

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            D+N YYCVGTAYVLPEENEPTKGRILVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAA
Sbjct: 781  DNNFYYCVGTAYVLPEENEPTKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAA 840

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            INQKIQLYKWM R+DG+ ELQSECGHHGHILAL+ QTRGDFIVVGDLMKSISLL+YKHEE
Sbjct: 841  INQKIQLYKWMTREDGSHELQSECGHHGHILALFTQTRGDFIVVGDLMKSISLLVYKHEE 900

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             AIEE ARDYNANWM+AVE++DDDIY+GAEN++NLFTVRKNS+ ATDEERGRLEVVGEYH
Sbjct: 901  SAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKNSDAATDEERGRLEVVGEYH 960

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEFVNRFRHGSLVMRLPD+++GQIPTVIFGT+NGVIG+IASLPH+QY+FLEKLQ+ L K
Sbjct: 961  LGEFVNRFRHGSLVMRLPDTEMGQIPTVIFGTINGVIGIIASLPHDQYVFLEKLQSILGK 1020

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
             IKGVG L+H+QWRSF+NEKKT +A+NFLDGDLIESFLDL+R++M+E+SK M VSVE L 
Sbjct: 1021 FIKGVGSLSHDQWRSFHNEKKTAEARNFLDGDLIESFLDLNRSKMEEVSKGMGVSVENLS 1080

Query: 1079 KRVEELTRLH 1088
            KRVEELTRLH
Sbjct: 1081 KRVEELTRLH 1090


>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
          Length = 1089

 Score = 1882 bits (4876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 909/1089 (83%), Positives = 997/1089 (91%), Gaps = 1/1089 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPT+VTHSCVGNFT P +LNLI+AKCTRIEIHLLTPQGLQPM+DVPIYG
Sbjct: 1    MSVWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQGLQPMIDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRPH E QDFLFIATERYKFCVLQWD E SEL+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA LLIPVP PL GV+IIGEETIVYC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC 240

Query: 241  SANA-FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
            +AN+ F+AIPI+ SI +AYGRVD DGSRYLLGD+AG+LHLLV+THE+E+VTGLKIE LGE
Sbjct: 241  NANSTFRAIPIKQSIIRAYGRVDPDGSRYLLGDNAGILHLLVLTHERERVTGLKIEYLGE 300

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            TSIAS+ISYLDN VVY+GS +GDSQL+KLNLQ D  GSYVEVLERYVNLGPIVDFCVVDL
Sbjct: 301  TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDL 360

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
            +RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKG+WSL+SS +DP+D +LVV
Sbjct: 361  DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV 420

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SFISETR LAMN+EDELEETEIEGF +QTQTLFC +AI + L+QVT+ SVRLVS TSREL
Sbjct: 421  SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL 480

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
             ++W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKH QLE+EISC+D+NP
Sbjct: 481  VDQWNAPEGFSVNVASANASQVLLATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNP 540

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
            IGENP YS +AAVGMWTDISVRI SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCA
Sbjct: 541  IGENPQYSSLAAVGMWTDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA 600

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            LGDGHL +FLLN  TGELTDRKKVSLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKK
Sbjct: 601  LGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK 660

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            LLYSNVNLKEV+HMCPFN+AA PDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E      
Sbjct: 661  LLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQHVAFA 720

Query: 720  HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
             +    T  +    NQ+  EESE HFVRLLD QTFEF+S Y LD +E+GCSI+SCSFSDD
Sbjct: 721  IRNVQDTSVLQLQHNQTSIEESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +NVYYCVGTAYVLPEENEP+KGRILVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  NNVYYCVGTAYVLPEENEPSKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            NQKIQLYKWMLR+DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE 
Sbjct: 841  NQKIQLYKWMLREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES 900

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            AIEE ARDYNANWMSAVE+LDD+IY+GAENN+N+FTVRKNS+ ATDEERGRLEVVGEYHL
Sbjct: 901  AIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHL 960

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GEFVNR RHGSLVMRLPDS++GQIPTVIFGT+NGVIG+IASLPHEQY+FLEKLQ+ L K 
Sbjct: 961  GEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVKF 1020

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            IKGVG L+HEQWRSF+N+KKT +A+NFLDGDLIESFLDLSR +M+E++K M V VEEL K
Sbjct: 1021 IKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSK 1080

Query: 1080 RVEELTRLH 1088
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>gi|242089089|ref|XP_002440377.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
 gi|241945662|gb|EES18807.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
          Length = 1783

 Score = 1881 bits (4873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 903/1108 (81%), Positives = 998/1108 (90%), Gaps = 24/1108 (2%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPT+V+HSCVGNFTSP +LNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIAT+ELFRPH E QDFLFIATERYKFCVLQWDAE SELITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATIELFRPHNETQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL+GC KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCVKPTIVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKD RHVKTYEVALKDKDFVEGPWSQNN+DNGA LLIPVP PL GV+IIGEE IVYC
Sbjct: 181  YQDNKDVRHVKTYEVALKDKDFVEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYC 240

Query: 241  SANA-FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
            +AN+ FKAIPI+ SI +AYGRVD DGSRYLLGD+ G+LHLLV+THE+E+VTGLKIE LGE
Sbjct: 241  NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIEYLGE 300

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            TSIAS+ISYLDN VVY+GS +GDSQL+KLNLQ DA GS+VE+LERYVNLGPIVDFCVVDL
Sbjct: 301  TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDL 360

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
            +RQGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKG+WSL+SS +DP+D +LVV
Sbjct: 361  DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV 420

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SFISETR LAMN+EDELEETEIEGF +QTQTLFC +A  + L+QVT+ SVRLVS TSREL
Sbjct: 421  SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNATNDLLIQVTANSVRLVSCTSREL 480

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
             ++W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKHAQLE+EISCLD+NP
Sbjct: 481  VDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDSKLVEVKHAQLEHEISCLDLNP 540

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
            IGENP YS +AAVGMWTDISVRIFSLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCA
Sbjct: 541  IGENPQYSSLAAVGMWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA 600

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            LGDG+L +FLLN  TGELTDRKKV+LGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKK
Sbjct: 601  LGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK 660

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            LLYSNVNLKEV+HMCPFN+AAFPDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRIC
Sbjct: 661  LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC 720

Query: 720  HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            HQEQS+T A CS K     EESE H +RLLD QTFE +  YPLD +E+GCSI+SCSF+DD
Sbjct: 721  HQEQSKTLAFCSFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYEFGCSIISCSFADD 780

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +NVYYCVGTAYV+PEENEPTKGRILVF VEDG LQLI EKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  NNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAI 840

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE-- 897
            NQKIQLYKWM R+DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YK    
Sbjct: 841  NQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKVVPL 900

Query: 898  ---------------------EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
                                 E AIEERARDYNANWM+AVE+LDD++Y+GAEN +NLFTV
Sbjct: 901  TVCLTHIVLSVIFFVSLFVVLESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTV 960

Query: 937  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
            RKNS+ ATD+ER RLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQIPTVIFGT+NGVIG
Sbjct: 961  RKNSDAATDDERARLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTINGVIG 1020

Query: 997  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 1056
            +IASLPH+QY+FLEKLQ+ L K IKGVG L+HEQWRSF+N+KKT +A+NFLDGDLIESFL
Sbjct: 1021 IIASLPHDQYVFLEKLQSTLVKYIKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFL 1080

Query: 1057 DLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DLSR++M+E+SK M V VEEL KRV+ +
Sbjct: 1081 DLSRSKMEEVSKAMGVPVEELSKRVDTI 1108


>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
 gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
          Length = 1089

 Score = 1878 bits (4864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 887/1090 (81%), Positives = 989/1090 (90%), Gaps = 3/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFTSP ELNLIIAKCTRIE HLLT QGLQP+LDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEFHLLTAQGLQPLLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRP GE QD LF++TERYKFCVLQWD+E++EL+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPPGETQDVLFVSTERYKFCVLQWDSETTELVTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GI+DP+CRLIGLHLYDGLFKVIP DNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTI VL
Sbjct: 121  GIVDPECRLIGLHLYDGLFKVIPIDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYE+ LK+KDF EGPW QNNLDNGA +LIPVP PL GV+IIGE+TIVY 
Sbjct: 181  YQDNKDARHVKTYEIQLKEKDFGEGPWLQNNLDNGAGMLIPVPTPLGGVIIIGEQTIVYY 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            S +AFKAIPIRPSITKAYG+VDADGSRYLL DH G LHLLVITHE+++V GLK+ELLGET
Sbjct: 241  SGSAFKAIPIRPSITKAYGKVDADGSRYLLSDHTGSLHLLVITHERDRVLGLKVELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            S AS++SYLDN VVY+GSSYGDSQLIKLN Q D++ SYVEVLE +VNLGPIVD CVVDLE
Sbjct: 301  SAASSLSYLDNGVVYVGSSYGDSQLIKLNAQVDSRNSYVEVLESFVNLGPIVDLCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQAS ELQGIKGMWSLR+++ D FD FLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN++DELEETEIEGF S+ QTLFCH+AI++Q++QVTS S+RLV +TSR   
Sbjct: 421  FISETRILAMNMDDELEETEIEGFDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQL 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
             EW++P G ++NVATANASQVLLATGGG+LVY+EIG G LTEVKH QL+ EISCLDINPI
Sbjct: 481  TEWRTPSGVAINVATANASQVLLATGGGNLVYIEIGRGSLTEVKHVQLQNEISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G +P  S IAAVGMWTDISV++FSLP+L ++ KE LGGEIIPRSVL+CAFEG+SYLLCAL
Sbjct: 541  GTDPDRSNIAAVGMWTDISVQVFSLPNLEVLAKESLGGEIIPRSVLICAFEGVSYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHL NFL++  TG+L+DRKK+SLGTQPI LRTF SKN THVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLFNFLIDTSTGQLSDRKKISLGTQPIMLRTFRSKNATHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEV+HMCPFNSA+FPDSLAI KEGELTIGTIDDIQKLHIR++ LGEHPRRICH
Sbjct: 661  LYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVALGEHPRRICH 720

Query: 721  QEQSRTFAICSLK--NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            QEQ+RTF +C+ +  +    E+ E HFV+LLDDQTFE + +Y LDTFE GC+I++CSF+D
Sbjct: 721  QEQTRTFGLCTARFYSNPNGEDHESHFVKLLDDQTFEVLGSYNLDTFENGCTIITCSFTD 780

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            D   YYCVGTAY LPEENEP+KGRIL+F VEDGK QL+ EKETKGAVY+LNAFNGKLLA 
Sbjct: 781  DPATYYCVGTAYALPEENEPSKGRILIFTVEDGKFQLVTEKETKGAVYNLNAFNGKLLAG 840

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            INQKIQLYKW  R D TRELQSECGHHGHILALYVQ+RGDFIVVGDLMKSISLL+YK EE
Sbjct: 841  INQKIQLYKWTQR-DSTRELQSECGHHGHILALYVQSRGDFIVVGDLMKSISLLLYKPEE 899

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            GAIEERARDYNANWM+AVEILDDDIYLGAEN+FNLFTVRKNS+ ATDEERGRLEVVGEYH
Sbjct: 900  GAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKNSDAATDEERGRLEVVGEYH 959

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEFVNRFRHGSLVMRLPD++  QIPTVIFGTVNGVIGV+ASL  EQ+ FL++LQ  L K
Sbjct: 960  LGEFVNRFRHGSLVMRLPDNETSQIPTVIFGTVNGVIGVVASLQQEQFNFLQRLQHCLAK 1019

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
            VIKGVGGL+HEQWRSF++E+K  DAKNFLDGDLIESFLDL+R +MDE+S  M+VSVEELC
Sbjct: 1020 VIKGVGGLSHEQWRSFSSERKNADAKNFLDGDLIESFLDLNRAKMDEVSAAMSVSVEELC 1079

Query: 1079 KRVEELTRLH 1088
            KRVEE+TRLH
Sbjct: 1080 KRVEEMTRLH 1089


>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
 gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
          Length = 1089

 Score = 1875 bits (4856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 886/1090 (81%), Positives = 988/1090 (90%), Gaps = 3/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS+WNYVVTAHKPTNVTHSCVGNFTSP ELNLIIAKCTRIE HLLT QGLQP+LDVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEFHLLTAQGLQPLLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRP GE QD LF++TERYKFCVLQWD+E++EL+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPPGETQDVLFVSTERYKFCVLQWDSETTELVTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GI+DP+CRLIGLHLYDGLFKVIP DNKGQLKEAFNIRLEELQVLDIKFLYGC+KPTI VL
Sbjct: 121  GIVDPECRLIGLHLYDGLFKVIPIDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYE+ LK+KDF EGPWSQNNLDNGA +LIPVP PL GV+IIGE+TIVY 
Sbjct: 181  YQDNKDARHVKTYEIQLKEKDFGEGPWSQNNLDNGAGMLIPVPTPLGGVIIIGEQTIVYY 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            S +AFKAIPIRPSITKAYG+VDADGSRYLL DH G LHLLVITHE+++V GLK+ELLGET
Sbjct: 241  SGSAFKAIPIRPSITKAYGKVDADGSRYLLSDHTGSLHLLVITHERDRVLGLKVELLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            S AS++SYLDN VVY+GSSYGDSQLIKLN Q D++ SYVEVLE +VNLGPIVD CVVDLE
Sbjct: 301  SAASSLSYLDNGVVYVGSSYGDSQLIKLNAQVDSRNSYVEVLESFVNLGPIVDLCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQAS ELQGIKGMWSLR+++ D FD FLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN++DELEETEIEGF S+ QTLFCH+AI++Q++QVTS S+RLV +TSR   
Sbjct: 421  FISETRILAMNMDDELEETEIEGFDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQL 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
             EW++P   ++NVATANASQVLLATGGG+LVY+EIG G LTEVKH QL+ EISCLDINPI
Sbjct: 481  TEWRTPSAVAINVATANASQVLLATGGGNLVYIEIGRGSLTEVKHVQLQNEISCLDINPI 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G +P  S IAAVGMWTDISV++FSLP+L ++ KE LGGEIIPRSVL+CAFEG+SYLLCAL
Sbjct: 541  GTDPDRSNIAAVGMWTDISVQVFSLPNLEVLAKESLGGEIIPRSVLICAFEGVSYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHL NFL++   G+L+DRKK+SLGTQPI LRTF SKN THVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLFNFLIDTSNGQLSDRKKISLGTQPIMLRTFRSKNATHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEV+HMCPFNSA+FPDSLAI KEGELTIGTIDDIQKLHIR++ LGEHPRRICH
Sbjct: 661  LYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVALGEHPRRICH 720

Query: 721  QEQSRTFAICSLK--NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            QEQ+RTF +C+ +  +    E+ E HFV+LLDDQTFE + +Y LDTFE GC+I++CSF+D
Sbjct: 721  QEQTRTFGLCTARFYSNPNGEDHESHFVKLLDDQTFEVLGSYNLDTFENGCTIITCSFTD 780

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            D   YYCVGTAY LPEENEP+KGRIL+F VEDGK QL+ EKETKGAVY+LNAFNGKLLA 
Sbjct: 781  DPATYYCVGTAYALPEENEPSKGRILIFTVEDGKFQLVTEKETKGAVYNLNAFNGKLLAG 840

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            INQKIQLYKW  R D TRELQSECGHHGHILALYVQ+RGDFIVVGDLMKSISLL+YK EE
Sbjct: 841  INQKIQLYKWTQR-DSTRELQSECGHHGHILALYVQSRGDFIVVGDLMKSISLLLYKPEE 899

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            GAIEERARDYNANWM+AVEILDDDIYLGAEN+FNLFTVRKNS+ ATDEERGRLEVVGEYH
Sbjct: 900  GAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKNSDAATDEERGRLEVVGEYH 959

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEFVNRFRHGSLVMRLPD++  QIPTVIFGTVNGVIGV+ASL  EQ+ FL++LQ  L K
Sbjct: 960  LGEFVNRFRHGSLVMRLPDNETSQIPTVIFGTVNGVIGVVASLQQEQFNFLQRLQHCLAK 1019

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
            VIKGVGGL+HEQWRSF++E+K  DAKNFLDGDLIESFLDL+R +MDE+S  M+VSVEELC
Sbjct: 1020 VIKGVGGLSHEQWRSFSSERKNADAKNFLDGDLIESFLDLNRAKMDEVSAAMSVSVEELC 1079

Query: 1079 KRVEELTRLH 1088
            KRVEE+TRLH
Sbjct: 1080 KRVEEMTRLH 1089


>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1090

 Score = 1871 bits (4847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 894/1090 (82%), Positives = 985/1090 (90%), Gaps = 2/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS WNYVVTAHKPTNVTHSCVG FT+PQELNLIIAKCTRIEIHLLT  GLQPMLDVPIYG
Sbjct: 1    MSGWNYVVTAHKPTNVTHSCVGYFTNPQELNLIIAKCTRIEIHLLTASGLQPMLDVPIYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRP GE+QD LFI+ ERYKFCVLQWDAE+  L+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPPGESQDVLFISFERYKFCVLQWDAETGLLVTRAMGDVSDRIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GI+DPDCRLIGLHLYDGLFKVIP DNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTI VL
Sbjct: 121  GIVDPDCRLIGLHLYDGLFKVIPIDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV LK+KDF EGPW QNNLDNGA LLIPVP PL G +IIGE+TIVY 
Sbjct: 181  YQDNKDARHVKTYEVQLKEKDFGEGPWLQNNLDNGAGLLIPVPLPLGGAIIIGEQTIVYY 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            + + FKAIPIRPSITKAYGRVD+DGSRYLL DH G+L+LLVI+H+KE+V+ L +E LGET
Sbjct: 241  NGSVFKAIPIRPSITKAYGRVDSDGSRYLLSDHNGMLYLLVISHDKERVSALNVEPLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            S AST+SYLDN VV++GSSYGDSQLI+LN Q DAK SYVEVLE YVNLGPIVD CVVDLE
Sbjct: 301  SAASTLSYLDNGVVFVGSSYGDSQLIRLNHQADAKNSYVEVLESYVNLGPIVDLCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGA+KDGSLRIVRNGIGINEQAS ELQGIKGMWSLR+S+ D +DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAFKDGSLRIVRNGIGINEQASAELQGIKGMWSLRASSSDVYDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN +DELEETEI+GF S+ QTLFC++A+++QLVQVT+GS+RLV + +R   
Sbjct: 421  FISETRILAMNTDDELEETEIDGFDSEAQTLFCYNAVHDQLVQVTAGSLRLVDAKTRRQL 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
             EWK+P   ++NVATANASQVLLATGGG+LVY+EIG G L EV H QLEYEISCLDINP+
Sbjct: 481  TEWKAPAPMTINVATANASQVLLATGGGNLVYIEIGQGTLVEVAHVQLEYEISCLDINPV 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            G+NP  S + AVGMWTDIS+RIF+LP L LITKE LGGEIIPRSVL C+F+GI+YLLCAL
Sbjct: 541  GDNPERSNLVAVGMWTDISIRIFALPSLTLITKEMLGGEIIPRSVLFCSFDGIAYLLCAL 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHL NF LN  TGEL+DRKK+SLGTQPI LRTF SKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLFNFTLNPATGELSDRKKISLGTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEV+HMCPFNSA+FPDSLAI KEGELTIGTID+IQKLHIR++PLGEHPRRI H
Sbjct: 661  LYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDEIQKLHIRTVPLGEHPRRIAH 720

Query: 721  QEQSRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            QEQSRTFAICS K    S  E+ E H+VRL++DQTFE IS +PLD +E GCSI++CSF+D
Sbjct: 721  QEQSRTFAICSAKYAPGSNGEDMETHYVRLIEDQTFEIISGFPLDPYENGCSIITCSFTD 780

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            DSNVYYCVGTAY LPEE+EP+KGRILVF VEDGK+QL+AEKE KGAVY+LNAFNGKLLA 
Sbjct: 781  DSNVYYCVGTAYALPEESEPSKGRILVFSVEDGKIQLVAEKEVKGAVYNLNAFNGKLLAG 840

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            INQKI LYKW LRDDGTRELQ E  HHGHILALYVQ+RGDFIVVGDLMKSISLLIYK EE
Sbjct: 841  INQKIALYKWTLRDDGTRELQYESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEE 900

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            GAIEERARDYNANWM+AVEILDDD YLGAEN+FNLFTVRKN++ ATDEERGRLEVVGEYH
Sbjct: 901  GAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYH 960

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEFVNRFRHGSLVMRLPDS+  QIPTVIFGTVNGVIGVIASLP +Q+LFL+KLQ  L K
Sbjct: 961  LGEFVNRFRHGSLVMRLPDSEASQIPTVIFGTVNGVIGVIASLPQDQFLFLQKLQQALVK 1020

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
            VIKGVGGL+HEQWRSF+NE+KTVDA+NFLDGDLIESFLDLSR +M+EI+ ++ VSVEEL 
Sbjct: 1021 VIKGVGGLSHEQWRSFSNERKTVDARNFLDGDLIESFLDLSRNKMEEIATSLEVSVEELH 1080

Query: 1079 KRVEELTRLH 1088
            K VEELTRLH
Sbjct: 1081 KAVEELTRLH 1090


>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1089

 Score = 1841 bits (4768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 881/1090 (80%), Positives = 978/1090 (89%), Gaps = 3/1090 (0%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS WNYVVTA KPTNVTHSCVG FT+PQELNLIIAKCTRIEIHLLT  GLQ MLDVP+YG
Sbjct: 1    MSGWNYVVTAQKPTNVTHSCVGYFTNPQELNLIIAKCTRIEIHLLTASGLQSMLDVPLYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIATLELFRP GE+QD LFI+ ERYKFCVLQWDAE+   ITRAMGDVSDR GRPTDNGQI
Sbjct: 61   RIATLELFRPPGESQDVLFISFERYKFCVLQWDAETGSPITRAMGDVSDRTGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            GI+DPDCRLIGLHLYDG+FKVIP DNKGQLKEAFNIRLEELQVLDIKFLYGCA PTI VL
Sbjct: 121  GIVDPDCRLIGLHLYDGMFKVIPIDNKGQLKEAFNIRLEELQVLDIKFLYGCANPTIAVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            YQDNKDARHVKTYEV LK+KDF EGPW QNNLDNGA LLIPVP PL G +IIGE+TIVY 
Sbjct: 181  YQDNKDARHVKTYEVNLKEKDFGEGPWLQNNLDNGAGLLIPVPLPLGGAIIIGEQTIVYY 240

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            + + FKAIPIRPSITKAYGRVD+DGSRYLL DH G+L+LLVI+H+KE+V+ L +E LGET
Sbjct: 241  NGSVFKAIPIRPSITKAYGRVDSDGSRYLLSDHNGMLYLLVISHDKERVSALNVEPLGET 300

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            S AST+SYLDN VV++GSSYGDSQLI+LN Q D KGSYVEVLE +VNLGPIVD CVVDLE
Sbjct: 301  SAASTLSYLDNGVVFVGSSYGDSQLIRLNHQADVKGSYVEVLESFVNLGPIVDLCVVDLE 360

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQVVTCSGA+KDGSLRIVRNGIGINEQASVELQGIKGMWSLR+S+ D +DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAFKDGSLRIVRNGIGINEQASVELQGIKGMWSLRASSSDVYDTFLVVS 420

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FISETRILAMN +DELEETEI+GF S+ QTLFCH+A+++QLVQVT+GS+RLV++ +R+  
Sbjct: 421  FISETRILAMNTDDELEETEIDGFDSEAQTLFCHNAVHDQLVQVTAGSLRLVNAKTRKQL 480

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
             EWK+P   ++NVATANASQVLLATGGG+LVY+EIG G LT V H+QLEYEISCLDINP+
Sbjct: 481  TEWKAPAPMTINVATANASQVLLATGGGNLVYIEIGQGTLTGVAHSQLEYEISCLDINPV 540

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP  S + AVGMWTDISVRIF+LP L LI KE LGGEIIPRSVL C+F+G++YLLCA+
Sbjct: 541  GENPERSNLVAVGMWTDISVRIFALPSLTLINKEMLGGEIIPRSVLFCSFDGLAYLLCAV 600

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHL NF+LN  TGEL+DRKK+SLGTQPI LRTF SKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLFNFMLNPSTGELSDRKKISLGTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYSNVNLKEV+HMCPFNSA+FPDSLAI KEGELTIGTIDDIQKLHIR++PLGE P RI H
Sbjct: 661  LYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVPLGERPCRIAH 720

Query: 721  QEQSRTFAICSLKNQSCA--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            QEQSR+FAICS K       E+ E H+VRL++DQTFE  S + LD +E GCSI++CSF+D
Sbjct: 721  QEQSRSFAICSAKYSQGPNNEDIETHYVRLIEDQTFEITSGFALDLYEIGCSIITCSFTD 780

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            DSNVYYCVGTAY LPEE+EPTKGRILVF+VEDGKLQL+AEKE KGAVY+LNAFNGKLLA 
Sbjct: 781  DSNVYYCVGTAYALPEESEPTKGRILVFLVEDGKLQLVAEKEMKGAVYNLNAFNGKLLAG 840

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            INQKI LYKW LR DGTR L+ E  HHGHILALYVQ+RGDFIVVGDLMKSISLLIYK EE
Sbjct: 841  INQKIALYKWTLR-DGTRVLEIESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEE 899

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            GAIEERARDYNANWM+AVEILDDD YLGAEN+FNLFTVRKN++ ATDEERGRLEVVGEYH
Sbjct: 900  GAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYH 959

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGEFVNRFRHGSLVMRLPDS+   IPTVIFGTVNGVIGVIASLP +++LFL+KLQ  L K
Sbjct: 960  LGEFVNRFRHGSLVMRLPDSEASLIPTVIFGTVNGVIGVIASLPQDKFLFLQKLQQALVK 1019

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
            VIKGVGGL+HEQWRSF+NE+KTVDA+NFLDGDLIESFLDLSR +M+EI+  + +SVEELC
Sbjct: 1020 VIKGVGGLSHEQWRSFSNERKTVDARNFLDGDLIESFLDLSRNKMEEIAAPLEISVEELC 1079

Query: 1079 KRVEELTRLH 1088
            KRVEELTRLH
Sbjct: 1080 KRVEELTRLH 1089


>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
            distachyon]
          Length = 1074

 Score = 1550 bits (4012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 747/1088 (68%), Positives = 891/1088 (81%), Gaps = 14/1088 (1%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            M  WNYVVTAHKPT V+HSCVGNFT+P  LNLI+AKC R+EI+LLTPQGLQ M+DVP+YG
Sbjct: 1    MRAWNYVVTAHKPTAVSHSCVGNFTAPHHLNLIVAKCNRMEIYLLTPQGLQLMVDVPLYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             IATLELFR   E QDFLFI+ ERY+  VL WD  +SELITR+ GDVSD IGRPTDNGQI
Sbjct: 61   TIATLELFRSRSETQDFLFISMERYRCIVLHWDGRNSELITRSGGDVSDFIGRPTDNGQI 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
            G+IDP  RLIGL LYDGLFKVIPFDNKG LKEA NIRL+E  VLDIKFLYGCA+PT+VVL
Sbjct: 121  GVIDPQNRLIGLSLYDGLFKVIPFDNKGNLKEALNIRLQEFLVLDIKFLYGCARPTVVVL 180

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            +QDNKD+RHVKTYEVAL+DKDFVEG WSQ+NLDN A LLIPVP  L GV+IIGE TIVYC
Sbjct: 181  HQDNKDSRHVKTYEVALEDKDFVEGSWSQSNLDNSAHLLIPVP--LGGVIIIGEHTIVYC 238

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
            SA  FKA+ I+ SI +A GRVD DGSRYL GD+ G LHL+VITHE  +VT LK   +GET
Sbjct: 239  SATTFKALSIKQSIIRAVGRVDPDGSRYLYGDNTGALHLIVITHEWGRVTDLKTHYMGET 298

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            SIASTISYLD+ +VYIGS +GDSQLIKLN+Q DA  S+VE+LE+++N GPIVDFCVVD E
Sbjct: 299  SIASTISYLDSGLVYIGSRFGDSQLIKLNIQADASASFVEILEQFMNTGPIVDFCVVDTE 358

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            R+GQGQV+TCSGAYKDGS+R VRNG+ I +QASVEL+G+KG+WS++SS +DP+DTFLVV+
Sbjct: 359  RRGQGQVITCSGAYKDGSIRAVRNGVVITDQASVELRGMKGLWSMKSSLNDPYDTFLVVT 418

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            FI+ET  LAMN+E+ELEE +I+GF S+TQTL C  AI+NQL+QVTS SVRLVSS S EL 
Sbjct: 419  FINETHFLAMNMENELEEVDIKGFDSETQTLACGSAIHNQLIQVTSRSVRLVSSVSLELL 478

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            ++W +P  +SVNVA ANA+QVLLATG  HLVYLEI    +  VKH QLE+EISCLDINPI
Sbjct: 479  DQWFAPARFSVNVAAANANQVLLATGNCHLVYLEITSSKIVPVKHIQLEHEISCLDINPI 538

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GENP YS +AAVGMWTDISVRIFSLP L LI KEHL GE++PRSVLLC  E +SYL C L
Sbjct: 539  GENPQYSSLAAVGMWTDISVRIFSLPGLKLIRKEHL-GEVVPRSVLLCTIEAVSYLFCGL 597

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDGHL +F+LN  T EL+DR++VSLG QPI+L  FSS+N THVFAASDRP VIYSS++KL
Sbjct: 598  GDGHLFSFVLNSSTCELSDRRRVSLGAQPISLHIFSSQNRTHVFAASDRPAVIYSSDQKL 657

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            LYS  NLKEV+H+CPFN+A FP+S+ +AKE EL+IG I+DI++LHIR+IPL E  RRICH
Sbjct: 658  LYSYANLKEVNHVCPFNTAVFPESIVLAKESELSIGEINDIRQLHIRTIPLKEQARRICH 717

Query: 721  QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            QEQS+T A+CS K +    ES  HFVRLLD QTF  +ST+ LD FE GCSI+SCSFSDD 
Sbjct: 718  QEQSQTLALCSFKPKFIHAESGKHFVRLLDYQTFWVLSTHTLDEFECGCSIVSCSFSDDD 777

Query: 781  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            N YYCVGTAY+LP E EPTKGRIL+F+VE+ KL+L+AE+ETKGAVYSLNA  GKLLAA+N
Sbjct: 778  NFYYCVGTAYILPYEIEPTKGRILIFLVEERKLRLVAERETKGAVYSLNALTGKLLAAVN 837

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            QKI +YKW+ RD+   +LQSEC + G +LAL+ QT G FIVVGD+++S+SLL YK+EEG 
Sbjct: 838  QKIIVYKWVRRDN-RHQLQSECSYRGCVLALHTQTHGHFIVVGDMVRSVSLLRYKYEEGL 896

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            IE   RD+N  W++AV +LDDDIY+GA+N  NLFT+            GR  VVGEYHLG
Sbjct: 897  IEVVTRDFNTKWITAVAMLDDDIYIGADNCCNLFTLHS----------GRPGVVGEYHLG 946

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            + VNR  HGSLVM   DS++GQIPTVIFGT++G IGVIAS P++QY+FLEKLQ+ L K I
Sbjct: 947  DLVNRMHHGSLVMHHTDSEIGQIPTVIFGTISGAIGVIASFPYDQYVFLEKLQSVLVKFI 1006

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
            K VG L+H +WRSF N  +T +A+NF+DGDLIESFL LS ++M+E+S+ M +  +ELCK 
Sbjct: 1007 KSVGNLSHVEWRSFYNVSRTAEARNFVDGDLIESFLSLSPSKMEEVSQVMGLRADELCKI 1066

Query: 1081 VEELTRLH 1088
            VEEL +LH
Sbjct: 1067 VEELRKLH 1074


>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
            C-169]
          Length = 1101

 Score = 1398 bits (3619), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/1091 (60%), Positives = 845/1091 (77%), Gaps = 9/1091 (0%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTAHKPT+VT S VGNFTSP ++NLII+KCTRIEIH LTP+GL+ + DV IYGR+A
Sbjct: 9    FNYVVTAHKPTSVTQSIVGNFTSPTDINLIISKCTRIEIHTLTPEGLKGVADVAIYGRVA 68

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            T+ELFRP GE++D LF++TERYKFCVL++D+E+ EL+TRA GD+ D++GRP DNGQIGI+
Sbjct: 69   TMELFRPVGESKDLLFLSTERYKFCVLEYDSETGELVTRANGDIEDQVGRPCDNGQIGIV 128

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            DP CR+IGLHLYDGLFKVIP D+KGQL EAFN+R++EL V+D+ FL GCAKPTI VLYQD
Sbjct: 129  DPGCRMIGLHLYDGLFKVIPIDDKGQLHEAFNMRIDELNVIDMIFLEGCAKPTIAVLYQD 188

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-A 242
            NKDARH+KTYEV LK+KD  EGPW Q+NLD GA  +I VP PL G L++GE  I Y    
Sbjct: 189  NKDARHIKTYEVVLKEKDLTEGPWRQSNLDAGASRVIAVPEPLGGALVVGESVIAYMGQG 248

Query: 243  NAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSI 302
             A K  PI+ +I +A+GRVD DGSRYLLGD+ G L+LLV+ H+ E V GLK+E LG TS 
Sbjct: 249  QAMKCTPIKATIIRAHGRVDEDGSRYLLGDYVGNLYLLVLQHDGEHVAGLKVEPLGRTSA 308

Query: 303  ASTISYLDNAVVYIGSSYGDSQLIKLN---LQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
             ST++YLDN VV++GSS GDSQL++L+   + P    ++VEVLE   NLGPI+DF VVDL
Sbjct: 309  PSTLTYLDNGVVFVGSSGGDSQLVRLHPTPVTPQEPSNFVEVLETMTNLGPIIDFVVVDL 368

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
            ERQGQGQVV CSG   DGSLRIVRNGIG+ EQA+VEL GIKGMW+LR+S  D FDTFLV+
Sbjct: 369  ERQGQGQVVMCSGIMADGSLRIVRNGIGMIEQATVELPGIKGMWALRASHMDAFDTFLVI 428

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF+ ETRILA+N +DEL+E E+ GF +  QTL C + + + LVQV    VRLV +++R+L
Sbjct: 429  SFVGETRILAINADDELDEAELPGFSADAQTLCCGNTVSDHLVQVAGADVRLVDASTRQL 488

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
             ++W+ P G ++NVA+ + +Q   +T  G+LVYLE+G+  + +  H +L+ E++C+DI+P
Sbjct: 489  THQWRPPAGLNINVASVSPTQASPSTAHGNLVYLELGESGIEQKGHVKLDAEVACVDISP 548

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
            + E+   + + AVG W D+ V IFSLP +  +  E LGGEIIPRSVL  AFEG+ YLLCA
Sbjct: 549  LSEDGEAASLLAVGTW-DMRVHIFSLPAMAPLVSEPLGGEIIPRSVLFAAFEGVPYLLCA 607

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            +GDG L NF ++  TG L DRKK+ LGT+PI LR+F S   +HVFAASDRPTVIYS+NKK
Sbjct: 608  MGDGQLYNFHVDEATGALADRKKICLGTKPIMLRSFRSNGQSHVFAASDRPTVIYSANKK 667

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            LLYSNVN  EV+ M  FNS++FPDSLA+AKEG +TIG+ID IQKLHIR++PLGE PRR+ 
Sbjct: 668  LLYSNVNENEVNFMTSFNSSSFPDSLALAKEGAMTIGSIDQIQKLHIRTVPLGEQPRRLA 727

Query: 720  HQEQSRTFAICSLKNQSCA--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
            HQE SR+F + +  N      +++    VRLLDDQTFE +  + L+T E  C+  S SFS
Sbjct: 728  HQEASRSFLVLTSPNNGATGMDDAGPDSVRLLDDQTFETLDRFGLETNEVCCAAASMSFS 787

Query: 778  DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 837
            DD   YY VGTA  + EE EPTKGRILVF  + GKL L+ EKE KGA Y+L+ F GKL+A
Sbjct: 788  DDPCPYYVVGTAITVAEEPEPTKGRILVFGAKGGKLSLVCEKEVKGAAYNLHPFQGKLIA 847

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
             IN ++QL+KW   +DG+REL +EC H GH+LALY+ TRGDF++VGDLM+S+ LLIY+ +
Sbjct: 848  GINSRVQLFKWTQSEDGSRELTNECSHVGHVLALYIVTRGDFVIVGDLMRSLQLLIYRAD 907

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 957
            EG +E RARDY  +WM+AVE+LDDD YLGAEN+ N+FT+RKN++ A DE+R RLE VG+Y
Sbjct: 908  EGILEVRARDYKTHWMTAVEVLDDDTYLGAENSNNIFTLRKNTDAAADEDRNRLETVGQY 967

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 1017
            HLG FVNRFRHGSLVM+LPDS+  +IPTV+F T+NG IGVIASLP +Q+ FL +LQ  LR
Sbjct: 968  HLGVFVNRFRHGSLVMKLPDSEAAKIPTVLFVTINGSIGVIASLPQQQFQFLSRLQDCLR 1027

Query: 1018 KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM--NVSVE 1075
            KVIKGVGGL+H  WR+F +E   + ++NF+DGDLIE FLDL R  M+ +++ M   V+ E
Sbjct: 1028 KVIKGVGGLSHVAWRTFQDEHTKMPSQNFVDGDLIEQFLDLKRDSMERVAREMGEGVTSE 1087

Query: 1076 ELCKRVEELTR 1086
            +L + VEEL+R
Sbjct: 1088 DLLRMVEELSR 1098


>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
          Length = 727

 Score = 1358 bits (3516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/727 (90%), Positives = 700/727 (96%)

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSF 421
            QGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSF
Sbjct: 1    QGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSF 60

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            ISETRILAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR+
Sbjct: 61   ISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRD 120

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIG 541
            EW +P G++VNVATANASQVLLATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPIG
Sbjct: 121  EWHAPAGFTVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIG 180

Query: 542  ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALG 601
            +NP+YSQ+AAVGMWTDISVRIFSLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCALG
Sbjct: 181  DNPNYSQLAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALG 240

Query: 602  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL 661
            DGHLLNF ++  TG+L DRKKVSLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKLL
Sbjct: 241  DGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLL 300

Query: 662  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 721
            YSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICHQ
Sbjct: 301  YSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQ 360

Query: 722  EQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 781
            EQ+RTF ICSL NQS +EESEMHFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF++D N
Sbjct: 361  EQTRTFGICSLGNQSNSEESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKN 420

Query: 782  VYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
            VYYCVGTAYVLPEENEPTKGRILVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAINQ
Sbjct: 421  VYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQ 480

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
            KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGAI
Sbjct: 481  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAI 540

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 961
            EERARDYNANWMSAVEILDDDIYLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLGE
Sbjct: 541  EERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLGE 600

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK 1021
            FVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVIK
Sbjct: 601  FVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVIK 660

Query: 1022 GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
            GVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKRV
Sbjct: 661  GVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRV 720

Query: 1082 EELTRLH 1088
            EELTRLH
Sbjct: 721  EELTRLH 727


>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
 gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
          Length = 1114

 Score = 1301 bits (3368), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/1116 (58%), Positives = 818/1116 (73%), Gaps = 38/1116 (3%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT+VTHS VGNFT   ELNLI+AKCTRIEIH+LTP GLQPM DVP+YGRIA
Sbjct: 3    YNYVVTAQKPTSVTHSLVGNFTHDNELNLIVAKCTRIEIHMLTPDGLQPMHDVPVYGRIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             ++L+RP GE +  L++ATER  FCVL +D  S  + TRAMGD+S+ IGRP ++G IG +
Sbjct: 63   VMKLYRPAGEKRQLLYVATERLMFCVLAYDQTSGAIATRAMGDLSNTIGRPCEHGLIGEV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            DP+CRLIG   YDGLFKV+P D  GQL+EAF++RLEEL V+D+KF++GCA PTI VLY+D
Sbjct: 123  DPECRLIGSQAYDGLFKVVPMDRAGQLREAFDVRLEELNVVDVKFMHGCATPTICVLYED 182

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
             K+ARHVKTYEV +K+K   +GPWSQ++++ G+ L+IPVP PL G +++GE  IVY + +
Sbjct: 183  TKEARHVKTYEVDVKEKTLRDGPWSQSDVEGGSSLIIPVPAPLGGAIVVGESVIVYLNKD 242

Query: 244  AFKAIPIRPSITK----AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
                     +       A+G VDADGSRYLL D  G+LHLLV+ H++ +V  LK+E LG+
Sbjct: 243  GGNGAGGAIATKSVNVMAHGVVDADGSRYLLSDSTGMLHLLVLVHDRRRVHALKLESLGQ 302

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP----------DAKG-SYVEVLERYVNL 348
            TSIAST+SYLDN VVY+GS+YGDSQL++L+ QP             G +YVE LE + NL
Sbjct: 303  TSIASTLSYLDNGVVYVGSAYGDSQLVRLHAQPVRCAADQVPATPDGLTYVECLESFTNL 362

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR-- 406
            GPIVDF VVDL+R GQGQVVTCSG  KDGSLR+VRNG+GI+E+A++EL G+KG WSLR  
Sbjct: 363  GPIVDFAVVDLDRHGQGQVVTCSGVNKDGSLRVVRNGVGIHERAAIELPGVKGCWSLRRG 422

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             ++  P DT LVVSF  ETRILA++ +DEL E E  GF +  QTL   +     +VQ  +
Sbjct: 423  DASTHPSDTHLVVSFAGETRILAIDDDDELAECEFRGFSANEQTLCVCNVDGGFVVQCVA 482

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKH 525
              VRLV++   E R  W  P G +V+VA+AN +Q L+AT GG L  L +G   ++ E   
Sbjct: 483  SGVRLVNAADGEPRATWSPPGGATVSVASANRTQALVATTGGSLYSLALGSAALIRETAS 542

Query: 526  AQLE-YEISCLDINPIGE-NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL---GGEI 580
            A L+  EI+CLD  P+ +   + +++ AVG WT   V + ++PDL L+T   L   GG +
Sbjct: 543  ASLDGKEIACLDCTPLSDPGDAAARLCAVGTWT-AEVFLLTMPDLRLVTTSPLGGGGGGV 601

Query: 581  IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            IPR+VLLC+FEG  +LL  LGDG L  F ++ + G L D K +SLGTQPITLRTF SK  
Sbjct: 602  IPRAVLLCSFEGTPHLLAGLGDGALHTFGVDPEAGTLRDGKSLSLGTQPITLRTFRSKGA 661

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            THVFA SDRPTVIY +N KL+YSNVNL+EV H CPFN  AFPDSLA+A E +LTIG IDD
Sbjct: 662  THVFAGSDRPTVIYGNNGKLIYSNVNLREVLHACPFNCDAFPDSLALASESDLTIGGIDD 721

Query: 701  IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTY 760
            IQKLHIR++PLGE PRRI HQ ++RT+A  +        +   +FVRL DD TFE +  +
Sbjct: 722  IQKLHIRTVPLGEQPRRIAHQPETRTYAALTENF-----DENGYFVRLFDDVTFETLCKF 776

Query: 761  PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKE 820
             L+  E   S++SC+F+DD  VYY VGT Y LPEE EPT+GRILVF  EDGKLQL+AEKE
Sbjct: 777  RLEPDEQDSSVISCAFADDPRVYYVVGTGYSLPEEPEPTRGRILVFRAEDGKLQLVAEKE 836

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKW--MLRDDG----TRELQSECGHHGHILALYVQ 874
             KGAVY+LNAFNGKLLA IN K++L++    +  DG    T EL  EC HHGHI+ALYV 
Sbjct: 837  VKGAVYNLNAFNGKLLAGINSKVELFRGGDPVGADGAGGSTYELAKECSHHGHIVALYVA 896

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
             RG+FIVVGDLMKS+SLL YK EE  IEERARDYNANWM+AV+ILDDD YLGAENNFNLF
Sbjct: 897  VRGEFIVVGDLMKSVSLLAYKPEESVIEERARDYNANWMTAVDILDDDTYLGAENNFNLF 956

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
            T+R+ S+ ATDEER RLEVVGEYH+GEFVNRFR GSLVMRLPD +   +PT++FGTV+GV
Sbjct: 957  TLRRQSDAATDEERSRLEVVGEYHVGEFVNRFRRGSLVMRLPDQENADVPTLLFGTVSGV 1016

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE---KKTVDAKNFLDGDL 1051
            IGV+A+LP EQ+ FL  LQ  L K + GVGGL+H+ WRSF NE   +    A+ F+DGDL
Sbjct: 1017 IGVLATLPREQFEFLSALQAALNKTVSGVGGLSHDAWRSFQNEHRHRAKDGARGFVDGDL 1076

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            IESFLDL   +  E++  + +SV+EL +RVE+L RL
Sbjct: 1077 IESFLDLRPEKAREVAAAVKLSVDELTRRVEDLQRL 1112


>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1223

 Score = 1298 bits (3358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1209 (55%), Positives = 827/1209 (68%), Gaps = 128/1209 (10%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT+VTHS VGNFT   ELNL++AKCTR+EIHLLTPQGLQ M+DVPIYGRIA
Sbjct: 16   YNYVVTAQKPTSVTHSVVGNFTHEDELNLVVAKCTRVEIHLLTPQGLQAMMDVPIYGRIA 75

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            T+EL RP  E +  LFI TER  FCVL +DA   ELITRAMGD++DR+GRP++ G IG +
Sbjct: 76   TMELVRPPFEKKPMLFILTERNMFCVLSYDAAKGELITRAMGDLTDRVGRPSECGPIGAV 135

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            DP+CR+ GLHLYDGLFKVIP D  GQL+EAF++RLEELQV D+KFL G  KPTI VLYQD
Sbjct: 136  DPECRMYGLHLYDGLFKVIPMDQTGQLREAFSVRLEELQVFDVKFLAGTPKPTIAVLYQD 195

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
             K+ RH+KTYEV LKDKDF  GPW+QN++++G+  LI VP PL GV+++GE+ I Y +  
Sbjct: 196  TKEGRHIKTYEVCLKDKDFNPGPWAQNDVESGSRFLIAVPAPLGGVVVVGEKVIAYLNKE 255

Query: 244  A-------------------FKAIPIRPSIT-KAYGRVDADGSRYLLGDHAGLLHLLVIT 283
                                 KAI ++   T   YG VD DGSRYLL D AG LHLLV+ 
Sbjct: 256  TTHGVGDGGGGGGGGGGGMIVKAIAMQSDATIMTYGAVDKDGSRYLLSDSAGRLHLLVLM 315

Query: 284  HEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP----------- 332
            H+K +V  LK+E LG+TSIAS++SYLDN VVY+GS+YGDSQL++L+  P           
Sbjct: 316  HDKTRVRALKLESLGQTSIASSLSYLDNGVVYVGSAYGDSQLVRLHSTPIPIAGGGGGDG 375

Query: 333  -------------------DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGA 373
                               DA  +YVEVLE + +LGPIVDF VVDL+R GQGQVVTCSG 
Sbjct: 376  DGGGGGGGEIVPVDSGAVTDAP-NYVEVLESFTSLGPIVDFVVVDLDRHGQGQVVTCSGV 434

Query: 374  YKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
            +KDGSLR+VRNG+GI+EQA++EL G+KG W+L+++ D   DTFLVV+FI ETRILA+N +
Sbjct: 435  HKDGSLRVVRNGVGIHEQAAIELPGVKGCWALKNADDAVSDTFLVVAFIGETRILAINDK 494

Query: 434  DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 493
            DEL+ETE EGF    + L C +       QVTSG +RLV   +  LR  W   PG  V+V
Sbjct: 495  DELDETEFEGFAGDERALACANVDGGYACQVTSGGIRLVDVATGALRARWTPEPGERVSV 554

Query: 494  ATANASQVLLATGGGHLVYLEIGDG-----------ILTEVKHAQLEYEISCLDINPIGE 542
            A AN +QV++A  GG LV +  G G           +L E+    + +EI+CLD+ P+ +
Sbjct: 555  AAANRTQVVVALEGGTLVSVAAGGGGDAMDVDDASPLLRELARVNVGHEIACLDVTPLAD 614

Query: 543  -NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL-GGEIIPRSVLLCAFEGISYLLCAL 600
               + S+I AVG+W+   VR+ +   L  ++   L   E+IPR+VLLC+FEGI YLL  L
Sbjct: 615  PRAASSEICAVGLWS-AEVRVLATATLEELSSAPLTDAEVIPRAVLLCSFEGIPYLLAGL 673

Query: 601  GDGHLLNF-LLNMKTGELTDRKKVSLGTQ--------------PITLRTFSSKNTTHVFA 645
            GDG L  F L+  ++G + D KK+S+GTQ              PITL+TF +KNTTHVFA
Sbjct: 674  GDGQLFTFALMGERSGIIGDGKKLSVGTQARSIHWFPYDRVGVPITLKTFRNKNTTHVFA 733

Query: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 705
             SDRPTVIYS NKKL+YSNVNL+EV HMC FN  AFPDSLA+A E ELTIG IDDIQKLH
Sbjct: 734  GSDRPTVIYSQNKKLIYSNVNLREVLHMCAFNCDAFPDSLALASESELTIGGIDDIQKLH 793

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 765
            IR++PLGE PRRI HQ  SRTFA+ +        E E  +VRL DD TFE +  Y LD  
Sbjct: 794  IRTVPLGEQPRRIAHQPASRTFAVLTSHVSDVTNE-ESFYVRLFDDVTFETLFKYRLDVG 852

Query: 766  EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 825
            E   SI+SCSF+DD   YY VGTA+ LPEE EP++GRILV   ++G+L L+AEKE KGAV
Sbjct: 853  ETDSSIISCSFADDPASYYVVGTAFSLPEEVEPSRGRILVLRADEGRLSLVAEKEVKGAV 912

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDG------------------------------- 854
            Y+LNAFNGKLLA IN K+QL+KW+ R  G                               
Sbjct: 913  YNLNAFNGKLLAGINSKVQLFKWVSRGAGAGAGAGGGAEGGAVAMADGGGGGGGGGGAPA 972

Query: 855  ---TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
               T EL SEC HHGHI+ALYV  RGDFIVVGDLMKSISLL+YK +EG IEERARD+N N
Sbjct: 973  AATTCELASECSHHGHIVALYVDVRGDFIVVGDLMKSISLLVYKPDEGVIEERARDFNPN 1032

Query: 912  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 971
            WM+AV  LDD+ YLGAEN+FNLFTVRKNS+ A DEER RL+V+GEYHLGEFVNRFR GSL
Sbjct: 1033 WMTAVCALDDETYLGAENSFNLFTVRKNSDAAADEERSRLDVIGEYHLGEFVNRFRAGSL 1092

Query: 972  VMRLPDSDV-----------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            VMRLP                + PT +FGTVNG IGV+ASLP   + FL  LQ  + KV+
Sbjct: 1093 VMRLPGDGDGAGLGLGLDASNEAPTQLFGTVNGAIGVVASLPESTHTFLAALQKAMNKVV 1152

Query: 1021 KGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
             GVGG +H+ WRSF+NE ++  V+A+ F+DGDLIESFLDL   +  E++  + V VEEL 
Sbjct: 1153 SGVGGFSHDAWRSFHNEHRSRLVEARGFVDGDLIESFLDLRPEKASEVASVVGVGVEELT 1212

Query: 1079 KRVEELTRL 1087
            KR+EEL R+
Sbjct: 1213 KRIEELVRI 1221


>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
          Length = 1092

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1093 (57%), Positives = 810/1093 (74%), Gaps = 14/1093 (1%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVVTAH+ +    S  G+FT P++ NLI+AK +R+ I+ LTP+GLQP+LD  IYGRIA +
Sbjct: 4    YVVTAHRASCAQLSVRGSFTGPKDTNLIVAKGSRLVIYTLTPEGLQPVLDTGIYGRIAAI 63

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
            EL+   G  ++ L+I TER KFC++++D+ + ELIT+AMGDV D +GRP D G I  IDP
Sbjct: 64   ELYTVAGAERESLYILTERLKFCIVEYDSSTGELITKAMGDVQDSVGRPVDGGPIAHIDP 123

Query: 126  DCRLIGLHLYDGLFKVIPFDNK-GQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
            + R+IG  LYDGLFKVIP D + GQL+EAFNIRLEELQVLD++FLYG A+PTIV+LYQD 
Sbjct: 124  ERRMIGFLLYDGLFKVIPIDTRNGQLREAFNIRLEELQVLDVQFLYGYAQPTIVLLYQDP 183

Query: 185  KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA 244
            K+ RH+KTY+V+++DKDF+ GPWSQ  ++ GA ++IPVP P+ G +++GE+TI Y + + 
Sbjct: 184  KEMRHLKTYQVSIRDKDFIAGPWSQTGVEIGATMIIPVPTPIGGCILLGEQTISYLNGDK 243

Query: 245  --FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSI 302
               K I +  ++ +A+G++D DG RYLLGDH G L++LV+  +  KV GLK++ LGETS 
Sbjct: 244  GDTKTIHMDMTVIRAWGKIDEDGRRYLLGDHLGQLYVLVLEFDGNKVLGLKLDTLGETSS 303

Query: 303  ASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ 362
            A TI+YLD+ VV+IGS +GDSQLI+L+   D   S +EVLE + NLGPI DFCVVDLERQ
Sbjct: 304  AKTITYLDSGVVFIGSCFGDSQLIRLHPDKDENDSNIEVLESFTNLGPIQDFCVVDLERQ 363

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFI 422
            GQGQVVTCSG  KDGSLR+VRNGIGINEQA+VEL GIKG+WSLR S D  +D +L+ SF+
Sbjct: 364  GQGQVVTCSGTLKDGSLRVVRNGIGINEQAAVELPGIKGLWSLRESIDAQYDKYLIQSFV 423

Query: 423  SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
            +ETR+L +  ++EL ETEI+GF    QT+FC + + + L+Q+T  S+RLVS+ S++L  E
Sbjct: 424  NETRVLEIA-DEELSETEIDGFDHNAQTIFCSNVLGDCLLQITEVSLRLVSTKSKQLLKE 482

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGE 542
            W  P G  + VA  N  QV+L +G   L+YL++ +G +TEVK  +++ EI+CL++NP+GE
Sbjct: 483  WFPPNGERITVAGGNVQQVVLTSGKRTLIYLDVSNGDVTEVKRIEMDQEIACLNLNPLGE 542

Query: 543  NPSY--SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
               +  S   AVG W ++S+ +  LP + ++  E +GG+ IPRS+LL   EG+ YLLCAL
Sbjct: 543  KSDHNKSDFVAVGHW-NLSLSMLRLPSMEVVCTESIGGDAIPRSLLLVTLEGVDYLLCAL 601

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDG+L  F ++  T ++ +RKK+SLGT P+ L  F S+  THVFAASDRPTVIYS+N+KL
Sbjct: 602  GDGYLFTFAIDASTAQIGERKKISLGTHPMILSKFMSRGATHVFAASDRPTVIYSNNRKL 661

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            L+SNVNLKEV+ M PFNS  FPDSLAIA E  L IG IDDIQKLHIR++ L E PRRICH
Sbjct: 662  LFSNVNLKEVTQMAPFNSEGFPDSLAIATETSLRIGVIDDIQKLHIRTVYLREQPRRICH 721

Query: 721  QEQSRTF--AICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
            QE S+TF  A  S++     EE E  F++L DDQTFE + TY L  FE  CS+   SFSD
Sbjct: 722  QESSKTFCVATLSIRINRDGEEVEEQFIKLFDDQTFEILDTYQLQEFENTCSVECASFSD 781

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            D  +YY VGTA  +P+E+EP +GR+LVF V D KL L A KE KGA Y +  FNGKLLA 
Sbjct: 782  DPTLYYIVGTATAVPQESEPKEGRLLVFEVIDRKLHLKASKEIKGAPYQIKPFNGKLLAG 841

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            IN KI+L++    D G  EL SEC H GHIL LY+QTRGDFIV GDLM+SISLL YK  +
Sbjct: 842  INSKIELFRLSDSDTGHMELVSECCHRGHILVLYLQTRGDFIVAGDLMRSISLLTYKQVD 901

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            G IEE ARD+NANWM+AV+ILDDD +LGAE  FNLFTVRKN++  +DEER RLEVVGEYH
Sbjct: 902  GQIEEIARDFNANWMTAVDILDDDTFLGAEGYFNLFTVRKNTDATSDEERARLEVVGEYH 961

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LG+ VNRF+ GSLV+R   SD     T+IFGTVNG+IGVIA L  E+Y FL K+Q  L  
Sbjct: 962  LGDMVNRFQRGSLVLR--SSDTPTTDTIIFGTVNGMIGVIAVLSKEEYEFLLKVQDALNF 1019

Query: 1019 VIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NVSVE 1075
            VIKGVGGL HE WRSF NE+       K F+DGDLIESFLDL R +M+E+   + +++VE
Sbjct: 1020 VIKGVGGLRHEDWRSFENERTQGARAPKGFIDGDLIESFLDLRREKMEEVCHAIGSITVE 1079

Query: 1076 ELCKRVEELTRLH 1088
            EL +++EEL RLH
Sbjct: 1080 ELSRKIEELQRLH 1092


>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
          Length = 1108

 Score = 1267 bits (3279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1105 (56%), Positives = 799/1105 (72%), Gaps = 28/1105 (2%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVV+AHKPT+V HS VG+FT+  +LNL+I+K T++E+H LT +GLQ +LDVP+YGR+A
Sbjct: 12   YNYVVSAHKPTSVQHSAVGHFTAASDLNLVISKSTQLEVHRLTAEGLQGVLDVPLYGRVA 71

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             L+LFRP  E +D L + TER KFCVL +D ES EL+TRA GD SDR+GR  + GQ GI+
Sbjct: 72   ALQLFRPASEPRDLLLLLTERNKFCVLGFDEESGELVTRANGDASDRVGRQVELGQRGIV 131

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            DP CRLIGLHLYDGLFKVIP D +G L+EAFN+RL+EL+V+DI FL GCA PTI VLY+D
Sbjct: 132  DPQCRLIGLHLYDGLFKVIPMDERGGLQEAFNMRLDELKVVDIAFLDGCAAPTIAVLYED 191

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
             K+ RHVKTYEV+L++K+ VEGPW Q+NLD GA +LIPVP    G +++GE  + + +  
Sbjct: 192  TKEQRHVKTYEVSLREKELVEGPWQQSNLDAGASMLIPVPAS-GGAMVVGESVVTFIAPG 250

Query: 244  AFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG------------ 291
              ++  I+P++  AYG+VD DGSR+LL D  G L+LL++  E+                 
Sbjct: 251  VVRSAAIKPTL--AYGQVDDDGSRFLLSDFLGNLYLLLLLREEGAAGASSSSGAGAGAVA 308

Query: 292  -LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP---DAKGSYVEVLERYVN 347
             LK+E LG T  ASTI+YLD+ VV++GSS+GDSQLI+L+  P       S+VEVL+   N
Sbjct: 309  GLKLEPLGRTPAASTIAYLDSGVVFVGSSFGDSQLIRLHSSPPDPSQPTSFVEVLDSQPN 368

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
            LGPIVDF VVDLERQGQGQVVTCSG   DGSLRIVRNGIG+ EQA VEL GIK +WSLR 
Sbjct: 369  LGPIVDFAVVDLERQGQGQVVTCSGTGVDGSLRIVRNGIGVVEQALVELPGIKDLWSLRK 428

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  D  DT+LV++F  ETR+L MN EDEL+E EI GF S   TL C + +++QL+QVT+ 
Sbjct: 429  TFMDAHDTYLVLTFSGETRVLGMNAEDELDEAEIPGFNSTALTLCCANTVHDQLLQVTAT 488

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
            + RLV   +++L  +W+      + +A A+ +Q++ A GG  LVYLE+GDG + E    Q
Sbjct: 489  AFRLVDCMTQQLVTQWEPGADGRITIAAASPTQLVAAVGGRTLVYLELGDGQIEEKGRVQ 548

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLL 587
            L+ +I+CLDI P+GE    S++ AVG W  +   IF+LP L  + +E L  ++IPRS L 
Sbjct: 549  LDADIACLDITPVGELSEASEVVAVGSWA-LEAHIFALPSLAPLFREKLPTDVIPRSTLF 607

Query: 588  CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
              FEG +YL+  LGDG L+N+ L+      TDRKK++LGT+PI+LRTF S+    VFAAS
Sbjct: 608  AQFEGDTYLMYGLGDGQLVNYRLDADGP--TDRKKIALGTKPISLRTFRSRGAAAVFAAS 665

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 707
            DRPTVIYSSN+KLLYSN+N  EVSHM  FN+AAFPDSLA+ K+  L IGTID+IQKLH+R
Sbjct: 666  DRPTVIYSSNRKLLYSNLNENEVSHMTSFNTAAFPDSLALGKQEALLIGTIDEIQKLHVR 725

Query: 708  SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEY 767
            ++PLGE PRRI HQE SRTFA+   +     E  +   VRL+D+QTFE +    L   E 
Sbjct: 726  TVPLGEQPRRIAHQETSRTFAVTCTQATISGEGGDS--VRLVDEQTFELLDRLQLQQHEL 783

Query: 768  GCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYS 827
             CS+ S    DD   YY VGTA+  P E EPTKGRI V     GKL ++ EKET+GAVYS
Sbjct: 784  ACSLCSTQLGDDPATYYVVGTAFAPPNEPEPTKGRIFVLAAAGGKLCVVCEKETRGAVYS 843

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 887
            L  F G+LLA IN ++Q+YKW+ + +G R L  EC H GH+LALY+ TRGD +VVGDLMK
Sbjct: 844  LAEFQGRLLAGINSRVQMYKWLEQGEGGRALVPECSHAGHVLALYLATRGDLVVVGDLMK 903

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE 947
            SI LL +  EEGA+E RARD++ NWMSAV +LDDD Y+GAEN++NLFTVR+N++ ATDEE
Sbjct: 904  SIQLLAWGEEEGALELRARDFHPNWMSAVTVLDDDTYMGAENSYNLFTVRRNADAATDEE 963

Query: 948  RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL 1007
            R RLE VG YHLGEFVNRF+ GSLVMRLPDS++ QIPTV+FGT+NGVIGV+ASLPH QY 
Sbjct: 964  RSRLETVGRYHLGEFVNRFQPGSLVMRLPDSELSQIPTVLFGTINGVIGVVASLPHAQYQ 1023

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
             LE LQ  +RKV+KGVGG +H QWR+F+N+      A+ F+DGDLIE FLDL R   + +
Sbjct: 1024 LLESLQEAMRKVVKGVGGFDHAQWRAFSNQHMPATPARQFVDGDLIEQFLDLKRDSAEAV 1083

Query: 1067 SKTM---NVSVEELCKRVEELTRLH 1088
               M     +VE + + VEEL+RLH
Sbjct: 1084 IAAMAGGGATVESVTQLVEELSRLH 1108


>gi|348681092|gb|EGZ20908.1| hypothetical protein PHYSODRAFT_259403 [Phytophthora sojae]
          Length = 1137

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1136 (54%), Positives = 804/1136 (70%), Gaps = 52/1136 (4%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYV TA KPT+VTHS    FT P + NL++AK TR E+HLLTP+GL P  DV +YGRIA
Sbjct: 3    YNYVATAQKPTSVTHSLTAAFTGPNDTNLLLAKSTRFEVHLLTPEGLSPQHDVNLYGRIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
              E+FR   E QD+LFI T+R++FCVL +DA + + +T+A G + D IGR ++    G I
Sbjct: 63   IFEVFRALNEPQDWLFIVTQRFQFCVLAYDAAAQQFVTKAHGSIRDSIGRSSEIVTSGNI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDN-KGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            DP+ RLIG++LY+G FKVIP D+ KG LK+ FNIRL+EL+V+DIKFL+G  KPTI VLY+
Sbjct: 123  DPEGRLIGMNLYEGYFKVIPIDSGKGILKDTFNIRLDELRVIDIKFLHGYTKPTICVLYE 182

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D K ARH+KTY + LK+KDF EGPWSQ+N+++GA LLIPVP P+ GVLI+  +TIVY + 
Sbjct: 183  DYKAARHIKTYHILLKEKDFAEGPWSQSNVESGASLLIPVPAPVGGVLIVSNQTIVYHNG 242

Query: 243  NAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSI 302
            + F AIP++ ++ + YG VD DGSR+LL D  G L ++ + H  ++VTG+ +E+LGET+I
Sbjct: 243  STFHAIPMQSTVIQVYGAVDKDGSRFLLADQYGTLSVVALQHTGKEVTGVHLEVLGETNI 302

Query: 303  ASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ 362
            AS +SYLDN VV+IGS++GDSQLIKLN   D  GSY+EVL+ YVN+GPI+DFCV+DL+RQ
Sbjct: 303  ASCLSYLDNGVVFIGSTFGDSQLIKLNADRDENGSYIEVLDTYVNVGPIIDFCVMDLDRQ 362

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFI 422
            GQGQ+VTCSGA KDG+LR++RNGIGINEQAS EL GIKGMW+LR +     D +L+ S++
Sbjct: 363  GQGQIVTCSGADKDGTLRVIRNGIGINEQASAELPGIKGMWALRETFAAEHDKYLLQSYV 422

Query: 423  SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
            SE RILA+  EDE+EE EI  F +  +TL C +   +  +QVT   VRL+S TS  L + 
Sbjct: 423  SEIRILAIGDEDEMEEKEIPAF-TNVKTLLCRNMYGDVWLQVTESEVRLISCTSLSLSST 481

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGE 542
            W  P G  + VA AN +QV +AT GG LVYLE+ +G +TE    ++E+EI+C+DI P+  
Sbjct: 482  WSPPLGSRITVAAANPTQVAVATSGGVLVYLEVENGQVTEKTKVKMEHEIACVDITPLAR 541

Query: 543  NPSY-------------------SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR 583
            + +                    S I  VG+WT+ SV +  LP L  +T E LG +++PR
Sbjct: 542  SQATDGDVAMTGSSTHWDMAALNSSICVVGLWTNFSVSVLKLPTLEKLTTESLGTDLLPR 601

Query: 584  SVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
            SVL   FEG  YLL  LGDG L+N+ LN+  G L  RK+VSLG+QP++L TF SKN THV
Sbjct: 602  SVLCNTFEGKDYLLVGLGDGSLMNYELNVAQGTLGTRKRVSLGSQPLSLSTFRSKNMTHV 661

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 703
            FAA DRPTVIYSSN KLLYSN+N KEV+ MCPF+S +FP+ LA++ E ELTIGT+DDIQK
Sbjct: 662  FAACDRPTVIYSSNNKLLYSNINSKEVNVMCPFDSESFPECLALSSEEELTIGTVDDIQK 721

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFISTYP 761
            LHI++  L E  RRI H  +S T  +   S       EE +  FVRL DDQTFE + +Y 
Sbjct: 722  LHIQTFHLNEWARRIAHDPESHTLGVLTVSFTVDDTGEEVDQGFVRLFDDQTFEVLHSYR 781

Query: 762  LDTFEYGCSILSCSFSDDSN--VYYCVGTAYVLPEENEPTKGRILVFIVE----DGKLQL 815
            LD FE   S++ C FS DS+   Y+ VGTAY+  +E EP +GRILVF V     + KLQL
Sbjct: 782  LDPFETPSSVVVCPFSGDSSSGSYFVVGTAYIHEDEAEPHQGRILVFAVTGIHGERKLQL 841

Query: 816  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQT 875
            + EKE KGAVY LNAFNGK+LA +N K QLYKW    D  +EL SECGH+GH L LY+++
Sbjct: 842  VTEKEVKGAVYCLNAFNGKVLAGVNSKAQLYKWSENTDNEKELVSECGHYGHTLVLYMES 901

Query: 876  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 935
            RGDFIVVGDLMKS+SLL YK  +G IEE A+D N+NWMSA+ I+DDD Y+G+E +FNLFT
Sbjct: 902  RGDFIVVGDLMKSVSLLSYKQLDGTIEEIAKDLNSNWMSALGIVDDDTYIGSETDFNLFT 961

Query: 936  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL-------------VMRLPDSDVGQ 982
            V++NS  A+DEERGRLE VGE+HLGEFVNRFR+GSL             V + P     Q
Sbjct: 962  VQRNSGAASDEERGRLETVGEFHLGEFVNRFRYGSLTPAAAGPTDMVDVVEQAPIVPAAQ 1021

Query: 983  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
              +++FGTV+G+IGVI  L  +QY FL ++Q  L +V+KGVGG +H+ WR F N +   +
Sbjct: 1022 NQSMLFGTVSGMIGVILPLTKDQYSFLLRVQQALTQVVKGVGGFSHKDWRMFENRRSVSE 1081

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 1088
            A+NF+DGDL+ESFLDL + +M ++   +N           +VE+L  R+EEL +LH
Sbjct: 1082 ARNFIDGDLVESFLDLPKAQMTKVVDKLNSDGMLDGTDQFTVEDLTLRIEELAQLH 1137


>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1120

 Score = 1222 bits (3163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1107 (56%), Positives = 810/1107 (73%), Gaps = 30/1107 (2%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NYVVTAHKPT VTHS VG FTS +  +LI+AK TR+E++ L  +GL+P+LDVPI GRIAT
Sbjct: 18   NYVVTAHKPTVVTHSAVGKFTSSEATDLIVAKSTRLEVYRLHAEGLKPVLDVPINGRIAT 77

Query: 65   LELFRP-HGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            + L +   G+ +  L++ TERY F VL +D  + EL T A GDV D IGRP D+GQIGI+
Sbjct: 78   MSLCQTGSGDGKARLYLTTERYGFTVLSYDEANEELKTEAFGDVQDNIGRPADDGQIGIV 137

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            D  CR IGL LYDGLFKVIP D KG +KEAFNIRLEEL+V DIKFL+G  KPTI VLY+D
Sbjct: 138  DDTCRAIGLRLYDGLFKVIPCDEKGGVKEAFNIRLEELRVEDIKFLHGTPKPTIAVLYRD 197

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-- 241
             KDA H+KTYE+ +++K+FV  PW+QN+L+ G++ +IPVP P+ GV+++G+E IVY +  
Sbjct: 198  TKDAVHIKTYEIGIREKEFVSSPWAQNDLEGGSNKIIPVPAPIGGVVVLGQEIIVYLNKF 257

Query: 242  ---ANAF-KA-----IPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGL 292
               A+ F KA     IP R +IT  YG +D DGSRYLLGD  G+L+LLVI H+ ++V  L
Sbjct: 258  EDDADVFLKAINIPNIPDRTNIT-CYGAIDPDGSRYLLGDADGMLYLLVILHDGKRVREL 316

Query: 293  KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----NLQPDAKGSYVEVLERYVN 347
            KIE LG+TSIAST+SYLDN VV++GS+YGDSQLIKL     ++  D   +YV++LE + N
Sbjct: 317  KIERLGDTSIASTLSYLDNGVVFVGSTYGDSQLIKLHAEKTSIDKDGNPTYVQILEEFTN 376

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
            LGPIVDF  VDLER GQGQVVTCSGA KDGSLR+VRNGIGI+EQA ++L G+KG++SLR 
Sbjct: 377  LGPIVDFAFVDLERHGQGQVVTCSGALKDGSLRVVRNGIGIDEQAVIQLPGVKGLFSLRD 436

Query: 408  STDDPFDTFLVVSFISETRILAM--NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            S D   D +LVV+FI+ETRIL    +  D L+ETEI GF ++ QTL C +   N  +QVT
Sbjct: 437  SDDSQMDKYLVVTFINETRILGFVGDEGDTLDETEIAGFDAEAQTLCCGNMQGNVFLQVT 496

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKH 525
               VRLVS    +L +EWK   G  +  A  N +Q+L+A  GG L  L +  G +  +  
Sbjct: 497  HRGVRLVSRGG-DLLDEWKPKDGAEILSAKCNPTQILVAAAGGQLHCLNVAKGKIVLLAS 555

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV 585
               E EI+CLD  P+G+  S S + AVG+W+ + + + S+ DL++ITKE    +IIPRS 
Sbjct: 556  KTFENEIACLDCTPMGDGMS-SPVCAVGLWS-MDIVLASMSDLSVITKESTDEDIIPRST 613

Query: 586  LLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS--KNTTHV 643
            LLC+FE I YL   LGDG L+ ++L+  TG L+ RKK+SLGT+PITL+TF S   N + V
Sbjct: 614  LLCSFEDIPYLFVGLGDGQLITYVLDQNTGALSGRKKLSLGTKPITLQTFKSHATNVSSV 673

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 703
            FAASDRPTVI+S+NKKL+YSNVN++EV H+CPF+S AFPD+LA+A + +LTIG IDDIQK
Sbjct: 674  FAASDRPTVIFSNNKKLIYSNVNVQEVLHVCPFSSEAFPDALALAGDEDLTIGGIDDIQK 733

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLD 763
            LHIR+IPLG HPRRI HQ  + TFA+ ++++     + E+ F+RL+DD +F+ +  + L+
Sbjct: 734  LHIRTIPLGGHPRRIAHQVDTNTFAV-AVEHLMSKGDQEL-FIRLIDDGSFDTLHQFRLE 791

Query: 764  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 823
              E   S++SCSF+ DS  YY VGT +   +E+EP++GRILV  VE   L+L++EKE +G
Sbjct: 792  EHELASSLMSCSFAGDSREYYVVGTGFAYEQEDEPSRGRILVLRVEADALELVSEKEVRG 851

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 883
            AVY+LNAF GKLLA IN K++L+KW  R+D   EL SEC HHG I+   V+TRGD+I+VG
Sbjct: 852  AVYNLNAFKGKLLAGINSKLELFKWTPREDDAHELVSECSHHGQIITFSVKTRGDWILVG 911

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD-IYLGAENNFNLFTVRKNSEG 942
            DL+KS+SLL YK EEGAI+E ARD+NANWM+AV +LDDD  YLGAEN+ NLFTV +N   
Sbjct: 912  DLLKSMSLLQYKPEEGAIDEIARDFNANWMTAVAMLDDDETYLGAENSLNLFTVARNMNA 971

Query: 943  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP 1002
             TDEER RLE+ GEYHLGEFVN F  GSLVM L D D  ++PT++FGT NGVIGV+ASLP
Sbjct: 972  MTDEERSRLEITGEYHLGEFVNVFSPGSLVMSLKDGDSLEVPTLLFGTGNGVIGVLASLP 1031

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN--EKKTVDAKNFLDGDLIESFLDLSR 1060
             + Y F E+LQT++ K I+GVGGL H +WRSF +   +K+  ++NF+DGDL+ESFLDL  
Sbjct: 1032 KDAYDFAERLQTSMNKHIQGVGGLKHAEWRSFRHTLRRKSDPSRNFVDGDLVESFLDLKV 1091

Query: 1061 TRMDEISKTMNVSVEELCKRVEELTRL 1087
             + D ++  M     E+ +RVEEL RL
Sbjct: 1092 EQADVVAADMKCDRAEIIRRVEELQRL 1118


>gi|301121252|ref|XP_002908353.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
 gi|262103384|gb|EEY61436.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
          Length = 1150

 Score = 1214 bits (3141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1149 (53%), Positives = 803/1149 (69%), Gaps = 65/1149 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYV TA KPT+VTHS    FT   + NL++AK TR E+HLLTP+GLQP  D+ +YGRIA
Sbjct: 3    YNYVATAQKPTSVTHSLTAAFTGANDTNLLLAKSTRFEVHLLTPEGLQPQHDINLYGRIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
              E+FR   E QD++FI T+R++FCVL +D+ + +++T+A G + D IGR ++    G I
Sbjct: 63   IFEVFRAANEPQDWIFIVTQRFQFCVLAYDSSAQQVVTKAHGSIRDSIGRSSEIVTSGNI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDN-KGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            DP+ RLIG++LY+G FKVIP D+ KG L++ FNIRL+EL+V+DIKFL+G  KPTI VLY+
Sbjct: 123  DPEGRLIGMNLYEGYFKVIPIDSGKGILRDTFNIRLDELRVIDIKFLHGYNKPTICVLYE 182

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D K ARHVKTY + LK+KDF EGPWSQ+N+++GA LLIPVP P  GVLI+  +TIVY + 
Sbjct: 183  DYKAARHVKTYHILLKEKDFAEGPWSQSNVESGASLLIPVPAPTGGVLIVSNQTIVYHNG 242

Query: 243  NAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSI 302
            + F AIP++ ++ + YG VD DGSR+LL D  G L ++ + H  ++V+G+ +E+LGET+I
Sbjct: 243  STFHAIPMQSTVIQVYGAVDKDGSRFLLADQYGTLSVVALQHTGKEVSGVHLEVLGETNI 302

Query: 303  ASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ 362
            AS +SYLDN VV+IGS++GDSQLIKLN   D  GSY+EVL+ YVN+GPI+DFCV+DL+RQ
Sbjct: 303  ASCLSYLDNGVVFIGSTFGDSQLIKLNADRDETGSYIEVLDSYVNVGPIIDFCVMDLDRQ 362

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFI 422
            GQGQ+VTCSGA KDG+LR++RNGIGINEQAS EL GIKGMW+LR +     D FL+ S++
Sbjct: 363  GQGQIVTCSGADKDGTLRVIRNGIGINEQASAELPGIKGMWALRETFAAEHDKFLLQSYV 422

Query: 423  SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
            SE RILA+  EDE+EE EI  F +  +TL C +   +  +QVT   VRL+S +S  L + 
Sbjct: 423  SEVRILAIGDEDEMEEKEIPAF-TNVKTLLCRNMYGDYWLQVTESEVRLISCSSFSLSST 481

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGE 542
            W    G  + VA AN +QV +AT GG LVYLEI +G + E    ++E+E++C+DI P+  
Sbjct: 482  WSPASGSRITVAAANPTQVAVATSGGVLVYLEIENGQVVEKTTVKMEHELACVDITPLTS 541

Query: 543  NPS-------------------YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR 583
            + +                    S +  VG+WT  SV +  LP L   T E LG +++PR
Sbjct: 542  SGAGDGDVAMTGSSTHWDMAALRSTLCVVGLWTSFSVCVLQLPTLEKRTTEALGTDLLPR 601

Query: 584  SVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
            SVL   FEG  YLL  LGDG L+N+ L+++ G L  RK+VSLG+QP++L TF SKN THV
Sbjct: 602  SVLCNTFEGKDYLLVGLGDGSLMNYELDVQQGALGTRKRVSLGSQPLSLSTFRSKNMTHV 661

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 703
            FAA DRPTVIYS+N KLLYSN+N KEV+ MCPF+S +FP+ LA++ E ELTIGT+DDIQK
Sbjct: 662  FAACDRPTVIYSNNNKLLYSNINSKEVNVMCPFDSESFPECLALSSEEELTIGTVDDIQK 721

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFISTYP 761
            LHI++  L E  RRI H  +S T  +   S       EE +  FVRL DDQTFE + +Y 
Sbjct: 722  LHIQTFHLNEWARRIAHDPESHTLGVLTVSFTVDDTGEEVDQGFVRLFDDQTFEVLHSYR 781

Query: 762  LDTFEYGCSILSCSFSDDS--NVYYCVGTAYVLPEENEPTKGRILVFIVE----DGKLQL 815
            LD FE  CS++ C  + DS    Y+ VGTAY+  EE EP +GRILVF V     + KLQL
Sbjct: 782  LDPFETPCSVVVCPLAGDSVNASYFVVGTAYIHEEEAEPHQGRILVFAVTGIHGERKLQL 841

Query: 816  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQT 875
            + EKE KGAVY LN+FNGK+LA +N K QLYKW    D  +EL SECGH+GH L LY+++
Sbjct: 842  VTEKEVKGAVYCLNSFNGKVLAGVNSKAQLYKWSENTDNEKELVSECGHYGHTLVLYMES 901

Query: 876  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 935
            RGDFIVVGDLMKSISLL YK  +G IEE A+D N+NWMSAV I+DDD Y+G+E +FNLFT
Sbjct: 902  RGDFIVVGDLMKSISLLSYKQLDGTIEEIAKDLNSNWMSAVGIVDDDTYIGSETDFNLFT 961

Query: 936  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR--------------------- 974
            V++NS  A+DEERGRLE VGE+HLGEFVNRFR+GSLVM+                     
Sbjct: 962  VQRNSGAASDEERGRLETVGEFHLGEFVNRFRYGSLVMQNSSSTSQTPSGVVSTGPTAMV 1021

Query: 975  -----LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
                  P + V Q  +++FGTV+G+IGVI  +  +QY FL ++Q  L  V+KGVGG +H+
Sbjct: 1022 DVGESAPAAPVVQNQSMLFGTVSGMIGVILPISKDQYSFLLRVQQALTHVVKGVGGFSHK 1081

Query: 1030 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCK 1079
             WR+F N +   +A+NF+DGDL+ESFLDL + +M ++   +N           +VE+L  
Sbjct: 1082 DWRTFENRRSVSEARNFIDGDLVESFLDLPKPQMTKVVDKLNSDGMLDGTDQFTVEDLTL 1141

Query: 1080 RVEELTRLH 1088
            R+EEL +LH
Sbjct: 1142 RIEELVQLH 1150


>gi|413081953|ref|NP_741992.2| DNA damage-binding protein 1 [Rattus norvegicus]
 gi|293344614|ref|XP_002725831.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
 gi|293356422|ref|XP_002728912.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
 gi|149062405|gb|EDM12828.1| damage-specific DNA binding protein 1 [Rattus norvegicus]
          Length = 1140

 Score = 1210 bits (3130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1145 (53%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+GE+   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGESNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|149725200|ref|XP_001502072.1| PREDICTED: DNA damage-binding protein 1 [Equus caballus]
          Length = 1140

 Score = 1209 bits (3128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 800/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHAQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTATHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|344295432|ref|XP_003419416.1| PREDICTED: DNA damage-binding protein 1 [Loxodonta africana]
          Length = 1140

 Score = 1209 bits (3128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1145 (53%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVSLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +    QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAQQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +V+VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNVSVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|73983859|ref|XP_533275.2| PREDICTED: DNA damage-binding protein 1 [Canis lupus familiaris]
 gi|291409601|ref|XP_002721069.1| PREDICTED: damage-specific DNA binding protein 1 [Oryctolagus
            cuniculus]
 gi|301781686|ref|XP_002926259.1| PREDICTED: DNA damage-binding protein 1-like [Ailuropoda melanoleuca]
          Length = 1140

 Score = 1209 bits (3127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 800/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|7657011|ref|NP_056550.1| DNA damage-binding protein 1 [Mus musculus]
 gi|134034087|sp|Q3U1J4.2|DDB1_MOUSE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=UV-damaged DNA-binding factor
 gi|5931596|dbj|BAA84699.1| XPE UV-damaged DNA binding factor [Mus musculus]
 gi|16307148|gb|AAH09661.1| Damage specific DNA binding protein 1 [Mus musculus]
 gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus musculus]
 gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score = 1209 bits (3127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|354504619|ref|XP_003514371.1| PREDICTED: DNA damage-binding protein 1-like [Cricetulus griseus]
 gi|344258340|gb|EGW14444.1| DNA damage-binding protein 1 [Cricetulus griseus]
          Length = 1140

 Score = 1209 bits (3127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
          Length = 1140

 Score = 1209 bits (3127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1147 (53%), Positives = 807/1147 (70%), Gaps = 71/1147 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+ +T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    +S ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            I+DP+CR+IGL LYDGLFKVIP D + +  +AFNIRLEELQV+D++FLYGC  PT+  +Y
Sbjct: 123  IVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVQFLYGCQAPTVCFIY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG------- 291
             + + A+    I+ S    + RVD +GSRYLLGD  G L +L++  EKE++         
Sbjct: 242  GDKYLAVAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLL--EKEELMDGAVVLKD 299

Query: 292  LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
            L +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV V+E + NLGPI
Sbjct: 300  LHVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVGVMETFTNLGPI 359

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD 411
            VD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS +  
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESSR 419

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
              D  LV+SF+ +TR+L ++ E E+EETE++GF    QT FC +  + QL+Q+TS SVRL
Sbjct: 420  DTDDMLVLSFVGQTRVLMLSGE-EVEETELQGFVDNQQTFFCGNVAHQQLIQITSVSVRL 478

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            V+  S+ L +EWK P G +++VA+ N +QV+LA G   L YL+I  G L ++   ++E+E
Sbjct: 479  VTQDSKALVSEWKEPQGRNISVASCNNTQVVLAVGR-VLYYLQILSGELKQISSTEMEHE 537

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            ++CLDI P+GE  + S I AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FE
Sbjct: 538  VACLDITPLGERTADSCICAVGLWTDISARLLKLPCFTPLHKEMLGGEIIPRSILMTTFE 597

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
            G  YLLCALGDG L  F L+++TG L++RKKV+LGTQP  LRTF S +T++VFA SDRPT
Sbjct: 598  GSHYLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPT 657

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            VIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL
Sbjct: 658  VIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPL 717

Query: 712  GEHPRRICHQEQSRTFAICSLK-------------------------------------- 733
             E P+RIC+QE S+ F + S +                                      
Sbjct: 718  YESPKRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALSSSVSSSKLFPSSTSP 777

Query: 734  -NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
               S  EE E+H + ++D  TFE +  +     EY  S++SC    D  VY+ VGTA V 
Sbjct: 778  HETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGTAMVY 837

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W    
Sbjct: 838  PEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT--- 894

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
               +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG+ EE ARD+N NW
Sbjct: 895  -AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNW 953

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
            MSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLV
Sbjct: 954  MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFSHGSLV 1013

Query: 973  MR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
            ++ L +S      +V+FGTVNG+IG++ SL    Y  L  LQ  L KVIK VG + H  W
Sbjct: 1014 LQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFW 1073

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRV 1081
            RSF+ E+KT  A  F+DGDLIESFLDL R +M E+  T+ +          +V+E+ K V
Sbjct: 1074 RSFHTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIV 1133

Query: 1082 EELTRLH 1088
            EELTR+H
Sbjct: 1134 EELTRIH 1140


>gi|122692537|ref|NP_001073731.1| DNA damage-binding protein 1 [Bos taurus]
 gi|426251842|ref|XP_004019630.1| PREDICTED: DNA damage-binding protein 1 [Ovis aries]
 gi|134034086|sp|A1A4K3.1|DDB1_BOVIN RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|119223918|gb|AAI26630.1| Damage-specific DNA binding protein 1, 127kDa [Bos taurus]
 gi|296471644|tpg|DAA13759.1| TPA: DNA damage-binding protein 1 [Bos taurus]
          Length = 1140

 Score = 1208 bits (3125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 800/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGMSPLCAIGLWTDISARIAKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis niloticus]
          Length = 1140

 Score = 1207 bits (3124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1145 (53%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YGRIA
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGRIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWD--AESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTSKYNACILEYKQTGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            I+DP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEELQV+D+ FLYGC  PT+  +Y
Sbjct: 123  IVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E+       +  L 
Sbjct: 242  GDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLH 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV V+E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVAVMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L ++ E E+EETE+ GF    QT +C +  + QL+Q+TSGSVRLV 
Sbjct: 422  DDMLVLSFVGQTRVLMLSGE-EVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              S+ L +EWK P G +++VA  N +QV+LA G   L YL+I  G L ++   ++E+E++
Sbjct: 481  QDSKTLVSEWKEPQGRNISVAACNHTQVVLAVGRA-LYYLQILAGELKQISTTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+GE    S + AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FEG 
Sbjct: 540  CLDITPLGEGGGESPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F L+++TG L++RKKV+LGTQP  LRTF S +T++VFA SDRPTVI
Sbjct: 600  YYLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PRRIC+QE S+ F + S +                                        
Sbjct: 720  SPRRICYQEVSQCFGVLSSRVEIQDVSGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D +VY+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLVVDQHTFEVLHAHQFLPSEYALSLVSCRLGKDPSVYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGK LA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKFLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKSMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLV++
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVLQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L +S      +V+FGTVNG+IG++ SL    Y  L  LQ  L KVIK VG + H  WRS
Sbjct: 1016 NLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLDL R +M E+  T+ +          +V+E+ K VEE
Sbjct: 1076 FHTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score = 1207 bits (3124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +++S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQRDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|358440066|pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
          Length = 1159

 Score = 1207 bits (3124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 81

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 82   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 141

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 142  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 201

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 202  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPKPFGGAIIIGQESITYHN 260

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 261  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 320

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 321  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 380

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 381  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 440

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 441  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 499

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 500  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 558

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 559  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 618

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 619  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 678

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 679  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 738

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 739  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 798

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 799  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 858

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 859  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 915

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 916  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 974

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 975  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1034

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1035 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1094

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1095 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1154

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1155 LTRIH 1159


>gi|403255013|ref|XP_003920244.1| PREDICTED: DNA damage-binding protein 1 [Saimiri boliviensis
            boliviensis]
          Length = 1140

 Score = 1207 bits (3123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|359546285|pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex
 gi|361132519|pdb|4A0K|C Chain C, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
          Length = 1159

 Score = 1207 bits (3123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 81

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 82   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 141

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 142  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 201

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 202  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 260

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 261  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 320

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 321  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 380

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 381  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 440

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 441  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 499

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 500  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 558

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 559  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 618

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 619  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 678

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 679  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 738

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 739  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 798

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 799  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 858

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 859  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 915

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 916  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 974

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 975  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1034

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1035 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1094

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1095 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1154

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1155 LTRIH 1159


>gi|358440070|pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
 gi|358440072|pdb|4A0B|C Chain C, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
          Length = 1159

 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 81

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 82   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 141

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 142  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 201

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 202  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPSPFGGAIIIGQESITYHN 260

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 261  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 320

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 321  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 380

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 381  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 440

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 441  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 499

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 500  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 558

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 559  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 618

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 619  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 678

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 679  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 738

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 739  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 798

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 799  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 858

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 859  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 915

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 916  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 974

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 975  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1034

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1035 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1094

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1095 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1154

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1155 LTRIH 1159


>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
          Length = 1140

 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 798/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE +D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGENKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFSKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELVGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSCGLSPLCAIGLWTDISARILQLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTVLRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCRLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEQATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|221046711|pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4 Photoproduct
            Containing Dna-Duplex
 gi|221046715|pdb|3EI2|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
            Containing Dna-Duplex
 gi|221046719|pdb|3EI3|A Chain A, Structure Of The Hsddb1-Drddb2 Complex
          Length = 1158

 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 21   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 80

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 81   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 140

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 141  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 200

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 201  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 259

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 260  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 319

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 320  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 379

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 380  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 439

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 440  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 498

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 499  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 557

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 558  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 617

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 618  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 677

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 678  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 737

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 738  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 797

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 798  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 857

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 858  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 914

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 915  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 973

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 974  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1033

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1034 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1093

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1094 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1153

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1154 LTRIH 1158


>gi|410974071|ref|XP_003993471.1| PREDICTED: DNA damage-binding protein 1 [Felis catus]
          Length = 1193

 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 800/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 56   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 115

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 116  VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 175

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 176  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 235

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 236  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 294

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 295  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 354

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 355  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 414

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 415  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 474

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 475  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 533

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 534  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 592

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 593  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 652

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 653  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 712

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 713  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 772

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 773  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 832

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 833  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 892

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 893  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 949

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 950  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 1008

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 1009 AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1068

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1069 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1128

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1129 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1188

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1189 LTRIH 1193


>gi|148529014|ref|NP_001914.3| DNA damage-binding protein 1 [Homo sapiens]
 gi|296218432|ref|XP_002807395.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
            [Callithrix jacchus]
 gi|397516558|ref|XP_003828491.1| PREDICTED: DNA damage-binding protein 1 [Pan paniscus]
 gi|402893195|ref|XP_003909786.1| PREDICTED: DNA damage-binding protein 1 [Papio anubis]
 gi|426368721|ref|XP_004051351.1| PREDICTED: DNA damage-binding protein 1 [Gorilla gorilla gorilla]
 gi|12643730|sp|Q16531.1|DDB1_HUMAN RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=DNA damage-binding protein a;
            Short=DDBa; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=HBV X-associated protein 1;
            Short=XAP-1; AltName: Full=UV-damaged DNA-binding factor;
            AltName: Full=UV-damaged DNA-binding protein 1;
            Short=UV-DDB 1; AltName: Full=XPE-binding factor;
            Short=XPE-BF; AltName: Full=Xeroderma pigmentosum group
            E-complementing protein; Short=XPCe
 gi|203282525|pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1)
 gi|695362|gb|AAA62838.1| X-associated protein 1, partial [Homo sapiens]
 gi|1052865|gb|AAC50349.1| DDBa p127 [Homo sapiens]
 gi|15079750|gb|AAH11686.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|29792243|gb|AAH50530.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|61354161|gb|AAX44048.1| damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|119594341|gb|EAW73935.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_c [Homo
            sapiens]
 gi|168275638|dbj|BAG10539.1| DNA damage-binding protein 1 [synthetic construct]
 gi|189065506|dbj|BAG35345.1| unnamed protein product [Homo sapiens]
 gi|355566436|gb|EHH22815.1| Damage-specific DNA-binding protein 1 [Macaca mulatta]
 gi|380784123|gb|AFE63937.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|380808126|gb|AFE75938.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|380810144|gb|AFE76947.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|383408123|gb|AFH27275.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|410305600|gb|JAA31400.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
 gi|410352015|gb|JAA42611.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
          Length = 1140

 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|400260815|pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
            Dimerization And Its Roles In Chromatinized Dna Repair
 gi|401871507|pdb|4E5Z|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
            Dimerization And Its Roles In Chromatinized Dna Repair
          Length = 1150

 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 13   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 72

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 73   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 132

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 133  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 192

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 193  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 251

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 252  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 311

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 312  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 371

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 372  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 431

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 432  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 490

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 491  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 549

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 550  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 609

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 610  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 669

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 670  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 729

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 730  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 789

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 790  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 849

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 850  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 906

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 907  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 965

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 966  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1025

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1026 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1085

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1086 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1145

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1146 LTRIH 1150


>gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score = 1206 bits (3121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +P+SLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPNSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|311247551|ref|XP_003122699.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Sus scrofa]
          Length = 1140

 Score = 1206 bits (3121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 800/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N++QV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSNQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARISKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
 gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
          Length = 1152

 Score = 1206 bits (3121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1160 (52%), Positives = 809/1160 (69%), Gaps = 85/1160 (7%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTAHKPT V     G+FT P++LNLIIAK TR+EI+L+TP+GL+P+ +V  YGRIA
Sbjct: 3    YNYVVTAHKPTAVNACVTGHFTGPEDLNLIIAKNTRLEIYLVTPEGLRPVKEVGCYGRIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE +D LFI T RY  C+L++  D +   ++TRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPPGETKDLLFILTARYNACILEYKQDGDDVSIVTRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PT+V +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELNVIDVKFLYGCQVPTVVFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD    RHVKTYE++++DK+F +GPW Q+N++  A ++I VP P CG LIIG+E+I Y +
Sbjct: 183  QD-PHGRHVKTYEISVRDKEFSKGPWKQDNVETEASMVIAVPEPFCGSLIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-------VTG 291
             + + A+    I+ S    +GRVDA+GSRYLLGD +G L +L++  EKE+       V  
Sbjct: 242  GDKYVAVAPPAIKQSTLICHGRVDANGSRYLLGDMSGRLFMLLL--EKEELIDGSVTVKD 299

Query: 292  LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
            LK+ELLGETSIA  ++YLDN VVY+GS  GDSQLIKLN+  D  GSYV V+E + NLGPI
Sbjct: 300  LKVELLGETSIAECLTYLDNGVVYLGSRLGDSQLIKLNVDADDSGSYVHVMETFTNLGPI 359

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD 411
            VD CVVDLERQGQGQ+VTCSGAYK+GSLRI+RNGIGI+E AS++L GIKG+W L    + 
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLCVDPNG 419

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
              D  LV++F+ +TR+L ++ E E+EETE+ GF    QT FC + +  QL+Q+T+ SVRL
Sbjct: 420  TMDDTLVLAFVGQTRVLLLSGE-EVEETELPGF-EDKQTFFCGNVMGGQLLQITAASVRL 477

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            VS  +++L +EWK P   +++VA++N +QV+ A  G  + Y+EI +G L ++    +  E
Sbjct: 478  VSRQTKQLVSEWKPPSEKNISVASSNTTQVVCAV-GQVVYYIEIHEGELKQLGETVMARE 536

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            ++CLD+ P+ E    + + AVG+WTDIS  +  LP+L  +  E LGGEIIPRS+L+  FE
Sbjct: 537  VACLDVTPLVEGSDRAHLCAVGLWTDISAHMLQLPNLEPMHVEMLGGEIIPRSILMTTFE 596

Query: 592  GISYLLCALGDGHLLNFLLNMKTGE------LTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
            GI YLLCALGDG L  F LN +TG+      LT + KV+LGTQP  LRTF S +TT+VFA
Sbjct: 597  GIHYLLCALGDGSLFYFNLNPETGKNFSLHILTIKSKVTLGTQPTVLRTFRSLSTTNVFA 656

Query: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 705
             SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+  +  LTIGTID+IQKLH
Sbjct: 657  CSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSQGYPDSLALTNDSTLTIGTIDEIQKLH 716

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ------------------------------ 735
            IR++PL E PRRI +QE S+TF + S + +                              
Sbjct: 717  IRTVPLYESPRRIAYQETSQTFGVLSTRTEVEDASGGSGTQPVRPSASTTALSTSVSPNK 776

Query: 736  -----------SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 784
                       +  EE E+H + ++D  TFE +  + L   E+  S++SC   DD N Y+
Sbjct: 777  NALRSSNDSDGAFGEEIEIHSLLVVDQHTFEILHAHQLLKDEFALSMVSCKLGDDPNTYF 836

Query: 785  CVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
             +GTA V PEE+EP  GRI+VF   DGKLQ +AEKE KGAVYSL  FN KLLA+IN  ++
Sbjct: 837  IIGTAMVYPEESEPKSGRIIVFQYTDGKLQQVAEKEVKGAVYSLVQFNNKLLASINSTVR 896

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
            L++W       +EL+ EC H+ +ILALY++T+GDFI+VGDLM+S++LL YK  EG  EE 
Sbjct: 897  LFEWT----AEKELRVECNHYNNILALYLKTKGDFILVGDLMRSVTLLAYKPMEGCFEEI 952

Query: 905  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
            ARD+N NWMSAVEILDDD +LGAEN+FN FT +K+S   TDEER  L+ VG +HLGEFVN
Sbjct: 953  ARDFNPNWMSAVEILDDDNFLGAENSFNFFTCQKDSAATTDEERQHLQEVGHFHLGEFVN 1012

Query: 965  RFRHGSLVMRLP-DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGV 1023
             FRHGSLVM+ P ++      +V+FGTVNG +G++  LP + + FL+++Q+ L +VIK V
Sbjct: 1013 VFRHGSLVMQHPGETSTPTQGSVLFGTVNGAVGLVTQLPADFFNFLQEVQSKLTRVIKSV 1072

Query: 1024 GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------- 1072
            G + H  WRSFN E+KT   + F+DGDLIESFLDLSR +M E+ + + V           
Sbjct: 1073 GKIEHSFWRSFNTERKTEACQGFIDGDLIESFLDLSRDKMQEVVQGLQVGGAIMDDGSGM 1132

Query: 1073 ----SVEELCKRVEELTRLH 1088
                +VE+L K VEELTR+H
Sbjct: 1133 KRECTVEDLIKLVEELTRIH 1152


>gi|361132523|pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
 gi|361132525|pdb|4A0L|C Chain C, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
          Length = 1144

 Score = 1206 bits (3121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 7    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 66

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 67   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 126

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 127  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 186

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 187  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 245

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 246  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 305

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 306  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 365

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 366  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 425

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 426  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 484

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 485  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 543

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 544  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 603

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 604  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 663

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 664  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 723

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 724  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 783

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 784  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 843

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 844  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 900

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 901  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 959

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 960  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1019

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1020 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1079

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1080 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1139

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1140 LTRIH 1144


>gi|395852550|ref|XP_003798801.1| PREDICTED: DNA damage-binding protein 1 [Otolemur garnettii]
          Length = 1140

 Score = 1206 bits (3121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLV 
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVC 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
          Length = 1156

 Score = 1206 bits (3120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1161 (52%), Positives = 818/1161 (70%), Gaps = 83/1161 (7%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTAHKPT V+    GNFTSP ++NLI+AK TR+EI++++P+GL+P+ ++ IYGRI+
Sbjct: 3    YNYVVTAHKPTGVSACATGNFTSPDDINLILAKNTRLEIYVVSPEGLRPVKEIGIYGRIS 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQ--WDAESSELITRAMGDVSDRIGRPTDNGQIG 121
             ++L+RP GE +D LF  T +Y   +L+     +S E+IT+A G+++D   RP++ G IG
Sbjct: 63   IMKLYRPAGEKKDLLFFLTAKYNAAILECVQYGDSIEIITKAHGNIADTFSRPSETGNIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIR+EEL V D++FL+GC  PTIV+L+
Sbjct: 123  IIDPECRVIGLRLYDGLFKVIPLDKDNRELKAFNIRMEELTVQDMEFLHGCKTPTIVLLH 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD++ ARH+KTYEV+LKDK+FV+GPW Q+++++ A+L+I VP P CG LIIG+E+I Y +
Sbjct: 183  QDSQ-ARHMKTYEVSLKDKEFVKGPWKQDHVESEANLVIAVPEPFCGALIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + +  I    IR S    YG+VDA+GSRYLLGD AG L +L++  E +      V  LK
Sbjct: 242  GDQYVVITPHLIRQSTIVCYGKVDANGSRYLLGDMAGRLFMLLLEREDKMDGTTTVKDLK 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +E LGE +IA  I+YLDN VVY+GS  GDSQLIKL+ + + +GS+VE++E + NLGPIVD
Sbjct: 302  LEFLGEITIAECITYLDNGVVYVGSRLGDSQLIKLHAERNDQGSFVEIMEVFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR------- 406
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKGMW LR       
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGMWPLRVGPGVAP 421

Query: 407  --SSTDDPFDTF-----LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 459
                  DP D+      LV+SF+ +TR+L ++ E E+EETE+ GF +  QT FC +    
Sbjct: 422  HGGDGRDPGDSAERDNTLVLSFVRQTRVLMLSGE-EVEETELAGFDTSQQTFFCGNVRNK 480

Query: 460  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI 519
            QL+QVT+ +VRLV S +++L NEWK P   +++V T N SQV+ A     +  LEIGDG+
Sbjct: 481  QLIQVTAAAVRLVDSQTKQLLNEWKPPGARNISVVTCNQSQVVCAVRK-EVFCLEIGDGV 539

Query: 520  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
            L ++ +A+LE E++CLDI P+ E    + + AVG+WTDIS+RI SLP L  + KE++GGE
Sbjct: 540  LNQISNAELENEVACLDITPLSEKAEKATLCAVGLWTDISIRILSLPSLQQLQKENIGGE 599

Query: 580  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
            IIPRS+L+  FEGI YLLCALGDG L  FLL   TG LTDRKKV+LGTQP  L+TF S +
Sbjct: 600  IIPRSILITTFEGIHYLLCALGDGSLFYFLLEATTGALTDRKKVTLGTQPTVLKTFKSLS 659

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
            T++VFA SDRPTVIYSSN KL++SNVNLKEV+HMCP NS  +PDSLA+A +  L IGTID
Sbjct: 660  TSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDNTLLIGTID 719

Query: 700  DIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-------------------------- 733
            +IQKLHIR++PLGE PRRI +QE ++TF + +++                          
Sbjct: 720  EIQKLHIRTVPLGELPRRIAYQEATQTFGVITIRNDILGSSGLTPVRPSASTQAQNVTHS 779

Query: 734  ---------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
                           N    +E E+H + ++D  TFE +  +     EY  SI+S    +
Sbjct: 780  AQMSSIFKPGSVSTGNDQLGQEVEIHNLLIIDQHTFEVLHAHQFMQTEYAMSIVSTRLGN 839

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            D N YY VGTA VLP+E++P +GRI+VF   DGKL+ +AE+E KGA YS+  FNGKLLAA
Sbjct: 840  DPNTYYIVGTANVLPDESDPKQGRIVVFHWVDGKLEHVAEQEIKGAPYSMLEFNGKLLAA 899

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            IN  ++L++W    +  REL++EC H  +ILALY++ +GDF++VGDLM+S+SLL YK  E
Sbjct: 900  INSTVRLFEW----NAERELRNECSHFNNILALYLRAKGDFVLVGDLMRSMSLLAYKPLE 955

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            G  EE ARDY  NWMS+VEILDDD +LGAE+  NLF  +K+S   TDEER  L+ VG++H
Sbjct: 956  GNFEEIARDYQTNWMSSVEILDDDTFLGAESTTNLFVCQKDSAATTDEERQHLQEVGQFH 1015

Query: 959  LGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 1017
            LGEFVN FRHGSLVM+ P ++      +V+FGT++G IG+++ LP + Y FL ++Q  L 
Sbjct: 1016 LGEFVNVFRHGSLVMQHPGETSSPTQGSVLFGTIHGAIGLVSQLPADFYTFLSEVQEKLT 1075

Query: 1018 KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM------- 1070
            KVIK VG ++H  WRSF+ E+KT  A  F+DGDLIESFLDLSR +M E+ + +       
Sbjct: 1076 KVIKSVGKIDHAFWRSFSTERKTEPAVGFIDGDLIESFLDLSRDKMQEVVQGIQMDDGSG 1135

Query: 1071 ---NVSVEELCKRVEELTRLH 1088
               + SV++L K +EEL+R+H
Sbjct: 1136 MKRDASVDDLIKIIEELSRIH 1156


>gi|432851195|ref|XP_004066902.1| PREDICTED: DNA damage-binding protein 1-like [Oryzias latipes]
          Length = 1140

 Score = 1206 bits (3120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1145 (53%), Positives = 804/1145 (70%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YGRI+
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGRIS 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++  + +S ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTSKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            I+DP+CR+IGL LYDGLFKVIP D + +  +AFNIRLEELQV+D+ FLYGC  PT+  +Y
Sbjct: 123  IVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E+       +  L 
Sbjct: 242  GDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLH 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV V+E + NLGPI+D
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVTVMETFTNLGPILD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRES 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L ++ E E+EETE+ GF    QT +C +  + QL+Q+TSGSVRLV 
Sbjct: 422  DDMLVLSFVGQTRVLMLSGE-EVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              S+ L +EWK P G +++VA  N +QV+LA G   L YL+I  G L ++   ++E+E++
Sbjct: 481  QDSKALVSEWKEPQGRNISVAACNHTQVVLAVGRA-LYYLQILAGELKQISTTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+GE+ S S + AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FEG 
Sbjct: 540  CLDITPLGESSSESPLCAVGLWTDISARMLKLPCFTPLHKEMLGGEIIPRSILMTTFEGS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F L+++TG L++RKKV+LGTQP  LRTF S +T++VFA SDRPTVI
Sbjct: 600  YYLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PRRIC+QE S+ F + S +                                        
Sbjct: 720  SPRRICYQEVSQCFGVLSSRVEIQDASGAISAVRPSASTQALSSSVSSSKLFPSSTSPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EYG S++SC    D +VY+ VGTA V PE
Sbjct: 780  TSFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYGLSLVSCRLGKDPSVYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EPEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLV++
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L +S      +V+FGTVNG+IG++ SL    +  L  LQ  L KVIK VG + H  WRS
Sbjct: 1016 NLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWHSLLLDLQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEE 1083
            F  E+KT  A  F+DGDLIESFLDL R +M E+  T+ +          +V+E+ K VEE
Sbjct: 1076 FYTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGGGMKREATVDEVIKIVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
 gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 1139

 Score = 1206 bits (3119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1147 (53%), Positives = 802/1147 (69%), Gaps = 72/1147 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++  + ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            I+DP+CR+IGL LYDGLFKVIP D + +  +AFNIRLEELQV+D+ FLYGC  PT+  +Y
Sbjct: 123  IVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG------- 291
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  EKE++         
Sbjct: 242  GDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLL--EKEELMDGAVVLKD 299

Query: 292  LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
            L++ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  +  GSYV V+E + NLGPI
Sbjct: 300  LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDSGSYVAVMETFTNLGPI 359

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD 411
            VD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS    
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGR 419

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
              D  LV+SF+ +TR+L ++ E E+EETE+ GF    QT +C +  + QL+Q+TSG VRL
Sbjct: 420  ETDDMLVLSFVGQTRVLMLSGE-EVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVRL 478

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            V   S+ L +EWK P G +++VA  N+SQV+LA G   L YL+I  G L ++   ++E+E
Sbjct: 479  VMQDSKALVSEWKEPQGRNISVAACNSSQVVLAVGRA-LYYLQILSGELKQISTVEMEHE 537

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            ++CLDI P+GE    S + AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FE
Sbjct: 538  VACLDITPLGEGGE-SPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFE 596

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
            G  YLLCALGDG L  F L++ TG L++RKKV+LGTQP  LRTF S +T++VFA SDRPT
Sbjct: 597  GGYYLLCALGDGALFYFGLDLTTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPT 656

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            VIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL
Sbjct: 657  VIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPL 716

Query: 712  GEHPRRICHQEQSRTFAICSLK-------------------------------------- 733
             E PRRIC+QE S+ F + S +                                      
Sbjct: 717  YESPRRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALSSSVSSSKLFPSSTSP 776

Query: 734  -NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
               S  EE E+H + ++D  TFE +  +     EY  S++SC    D  VY+ VGTA V 
Sbjct: 777  HETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDPAVYFIVGTAMVY 836

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W    
Sbjct: 837  PEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT--- 893

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
               +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NW
Sbjct: 894  -AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 952

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
            MSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLV
Sbjct: 953  MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLV 1012

Query: 973  MR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
            ++ L +S      +V+FGTVNG+IG++ SL    Y  L  LQ  L KVIK VG + H  W
Sbjct: 1013 LQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFW 1072

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRV 1081
            RSF+ E+KT  A  F+DGDLIESFLDL R +M E+  T+ +          +V+E+ K V
Sbjct: 1073 RSFHTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIV 1132

Query: 1082 EELTRLH 1088
            EELTR+H
Sbjct: 1133 EELTRIH 1139


>gi|441604084|ref|XP_004087862.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
            [Nomascus leucogenys]
          Length = 1140

 Score = 1206 bits (3119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1145 (52%), Positives = 798/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGP VD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVAAMETFTNLGPXVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|418316|sp|P33194.1|DDB1_CERAE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=DDBa; AltName:
            Full=Damage-specific DNA-binding protein 1; AltName:
            Full=UV-damaged DNA-binding protein 1; Short=UV-DDB 1
 gi|304026|gb|AAA03021.1| UV-damaged DNA-binding protein [Chlorocebus aethiops]
          Length = 1140

 Score = 1205 bits (3118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1145 (52%), Positives = 798/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V      +FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTAHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|358440058|pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
            Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
 gi|358440062|pdb|4A09|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
            (Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
          Length = 1159

 Score = 1205 bits (3117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1145 (52%), Positives = 798/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 22   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 81

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 82   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 141

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 142  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 201

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTY V+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 202  QDPQ-GRHVKTYAVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 260

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 261  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 320

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 321  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 380

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 381  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 440

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 441  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 499

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 500  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 558

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 559  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 618

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 619  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 678

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 679  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 738

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 739  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 798

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 799  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 858

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 859  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 915

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 916  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 974

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 975  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1034

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1035 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1094

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1095 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1154

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1155 LTRIH 1159


>gi|197097564|ref|NP_001126613.1| DNA damage-binding protein 1 [Pongo abelii]
 gi|75041202|sp|Q5R649.1|DDB1_PONAB RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo abelii]
          Length = 1140

 Score = 1204 bits (3116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1145 (52%), Positives = 798/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNVCILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVY +  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYPMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 1139

 Score = 1204 bits (3116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1147 (53%), Positives = 803/1147 (70%), Gaps = 72/1147 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++  + ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            I+DP+CR+IGL LYDGLFKVIP D + +  +AFNIRLEELQV+D+ FLYGC  PT+  +Y
Sbjct: 123  IVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCFIY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG------- 291
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  EKE++         
Sbjct: 242  GDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLL--EKEELMDGAVVLKD 299

Query: 292  LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
            L++ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  +  GSYV V+E + NLGPI
Sbjct: 300  LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDSGSYVAVMETFTNLGPI 359

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD 411
            VD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS    
Sbjct: 360  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGR 419

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
              D  LV+SF+ +TR+L ++ E E+EETE+ GF    QT +C +  + QL+Q+TSG VRL
Sbjct: 420  ETDDMLVLSFVGQTRVLMLSGE-EVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVRL 478

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            V   S+ L +EWK P G +++VA  N+SQV+LA G   L YL+I  G L ++   ++E+E
Sbjct: 479  VMQDSKALVSEWKEPQGRNISVAACNSSQVVLAVGRA-LYYLQILSGELKQISTVEMEHE 537

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            ++CLDI P+GE+   S + AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FE
Sbjct: 538  VACLDITPLGEDGD-SPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFE 596

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
               YLLCALGDG L  F L++ +G L++RKKV+LGTQP  LRTF S +T++VFA SDRPT
Sbjct: 597  ASYYLLCALGDGALFYFGLDLTSGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPT 656

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            VIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL
Sbjct: 657  VIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPL 716

Query: 712  GEHPRRICHQEQSRTFAICSLK-------------------------------------- 733
             E PRRIC+QE S+ F + S +                                      
Sbjct: 717  YESPRRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALSSSVSSSKLFPSSTSP 776

Query: 734  -NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
               S  EE E+H + ++D  TFE +  +     EY  S++SC    D +VY+ VGTA V 
Sbjct: 777  HETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDLSVYFIVGTAMVY 836

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W    
Sbjct: 837  PEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMMEFNGKLLASINSTVRLYEWT--- 893

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
               +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NW
Sbjct: 894  -AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 952

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
            MSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLV
Sbjct: 953  MSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLV 1012

Query: 973  MR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
            ++ L +S      +V+FGTVNG+IG++ SL    Y  L  LQ  L KVIK VG + H  W
Sbjct: 1013 LQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFW 1072

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRV 1081
            RSF+ E+KT  A  F+DGDLIESFLDL R +M E+  T+ +          +V+E+ K V
Sbjct: 1073 RSFHTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIV 1132

Query: 1082 EELTRLH 1088
            EELTR+H
Sbjct: 1133 EELTRIH 1139


>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
          Length = 1140

 Score = 1204 bits (3115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1144 (53%), Positives = 799/1144 (69%), Gaps = 67/1144 (5%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA 
Sbjct: 4    NYVVTAQKPTAVNSCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +ELFRP GE +D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IGI
Sbjct: 64   MELFRPKGENKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGI 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP+CR+IGL LYDGLFKVIP + + +  +AFNIRLEELQV+D+KFLYGC  PTI  +YQ
Sbjct: 124  IDPECRMIGLRLYDGLFKVIPLERENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y + 
Sbjct: 184  DPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG-----LKI 294
            + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++   G     L++
Sbjct: 243  DKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGGVSLKDLRV 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD 
Sbjct: 303  ELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDM 362

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
            CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      D
Sbjct: 363  CVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHHETD 422

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLV+ 
Sbjct: 423  NTLVLSFVGQTRVLMLNGE-EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVTQ 481

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
              + L +EWK P G +++VA+ N+SQV++A G   L YLEI    L ++   ++E+E++C
Sbjct: 482  EPKALVSEWKEPNGKNISVASCNSSQVVVAVGR-VLYYLEIHPQELKQISCTEMEHEVAC 540

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+G+    S + A+G+WTDIS RI  LP  +L+ KE LGGEIIPRS+L+  FE   
Sbjct: 541  LDITPLGDASGMSPLCAIGLWTDISARILKLPSFDLLHKEMLGGEIIPRSILMTTFENSH 600

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIY
Sbjct: 601  YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY 660

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E 
Sbjct: 661  SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLSES 720

Query: 715  PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
            PR+IC+QE S+ F + S +                                         
Sbjct: 721  PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET 780

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
            S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V P+E
Sbjct: 781  SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPDE 840

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       
Sbjct: 841  AEPKQGRIVVFHYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----AE 896

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL++EC H+ +I+ALYV+T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSA
Sbjct: 897  KELRTECNHYNNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA 956

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            VEILDDD +LGAEN FNLF  +K+S   TDEER  L+  G +HLGEFVN F HGSLVM+ 
Sbjct: 957  VEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEFGLFHLGEFVNVFCHGSLVMQN 1016

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF
Sbjct: 1017 LGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSF 1076

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEEL 1084
            + E+KT  A  F+DGDLIESFLD+SR +M E+   + +          +V++L K VEEL
Sbjct: 1077 HTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEEL 1136

Query: 1085 TRLH 1088
            TR+H
Sbjct: 1137 TRIH 1140


>gi|384941436|gb|AFI34323.1| DNA damage-binding protein 1 [Macaca mulatta]
          Length = 1140

 Score = 1204 bits (3115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1145 (52%), Positives = 798/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NY VTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYGVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|5353754|gb|AAD42230.1|AF159853_1 damage-specific DNA binding protein 1 [Mus musculus]
          Length = 1140

 Score = 1204 bits (3114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1146 (52%), Positives = 799/1146 (69%), Gaps = 69/1146 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR++I+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLKIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG------L 292
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E E++ G      L
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKE-EQMDGTVTPKDL 300

Query: 293  KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIV 352
            ++ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIV
Sbjct: 301  RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV 360

Query: 353  DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP 412
            D CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS     
Sbjct: 361  DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRE 420

Query: 413  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
             D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLV
Sbjct: 421  TDDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 532
            S   + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E+
Sbjct: 480  SQEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEV 538

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            +CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE 
Sbjct: 539  ACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFES 598

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
              YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTV
Sbjct: 599  SRYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV 658

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            IYS N KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL 
Sbjct: 659  IYSXNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLY 718

Query: 713  EHPRRICHQEQSRTFAICSLK--------------------------------------- 733
            E PR+IC+QE S+ F + S +                                       
Sbjct: 719  ESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPH 778

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
              S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V P
Sbjct: 779  ETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYP 838

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W     
Sbjct: 839  EEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE-- 896

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWM
Sbjct: 897  --KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            SAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM
Sbjct: 955  SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVM 1014

Query: 974  R-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
            + L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WR
Sbjct: 1015 QNLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWR 1074

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVE 1082
            SF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VE
Sbjct: 1075 SFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVE 1134

Query: 1083 ELTRLH 1088
            ELTR+H
Sbjct: 1135 ELTRIH 1140


>gi|45383688|ref|NP_989547.1| DNA damage-binding protein 1 [Gallus gallus]
 gi|82098863|sp|Q805F9.1|DDB1_CHICK RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=UV-damaged DNA-binding factor
 gi|28375613|dbj|BAC56999.1| damaged-DNA binding protein DDB p127 subunit [Gallus gallus]
 gi|53130071|emb|CAG31438.1| hypothetical protein RCJMB04_6h2 [Gallus gallus]
          Length = 1140

 Score = 1203 bits (3113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1145 (52%), Positives = 801/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+ A
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++  + ++ ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D + +  +AFNIRLEELQV+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS +    
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHREM 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DNMLVLSFVGQTRVLMLNGE-EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N++QV++A G   L YLEI    L ++   ++E+E++
Sbjct: 481  QEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRA-LYYLEIRPQELRQINCTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G+    S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F L+++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG  HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   + +          +V++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
 gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
          Length = 1140

 Score = 1202 bits (3111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1145 (53%), Positives = 799/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS  +LNL+IAK TR+EI+++TP+GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNACVTGHFTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    +S ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDPDCR+IGL LYDGLFKVIP +   +  +AFNIRLEEL V+D+KFLY C  PTI  +Y
Sbjct: 123  IIDPDCRMIGLRLYDGLFKVIPLERDNKELKAFNIRLEELHVIDVKFLYSCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFSKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDVNGSRYLLGDMEGRLFMLLLEKEEQMDGSVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KL  + + +GSYV V+E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLTTESNEQGSYVVVMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LR + D   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRVAADRDT 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +  E E+EET++ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLTLTGE-EVEETDLAGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G  V+V + N+ QVLLA G   L YLEI  G L +    ++E+E++
Sbjct: 481  QNPQNLVSEWKEPQGRKVSVCSCNSRQVLLAVGR-VLYYLEIHPGELRQTSCTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLD+ P+G N + S + A+G+WTDIS RI SLP   L+ KE LGGEIIPRS+L+ +FE  
Sbjct: 540  CLDVTPLGGNDTLSSLCAIGLWTDISARILSLPGFQLLHKEMLGGEIIPRSILMTSFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN  TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFSLNTDTGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLFE 719

Query: 714  HPRRICHQEQSRTFAICSLKNQ------------------------SCA----------- 738
             PR+IC+QE S+ F + S + +                        SC+           
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDASGGSSPLRPSASTQALSSSVSCSKLFSGSTSPHE 779

Query: 739  ----EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
                EE E+H + ++D  TFE + T+     EY  S++SC    D   Y+ VGTA V P+
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHTHQFLQNEYTLSLVSCKLGKDPTTYFVVGTAMVYPD 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYNDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSPPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   + +          +V++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRETTVDDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
            tropicalis]
          Length = 1140

 Score = 1202 bits (3109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1145 (52%), Positives = 801/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS  +LNL+IAK TR+EI+++TP+GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNACVTGHFTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++  + +S ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDPDCR+IGL LYDGLFKVIP +   +  +AFNIRLEEL V+D+KFLY C  PTI  +Y
Sbjct: 123  IIDPDCRMIGLRLYDGLFKVIPLERDNKELKAFNIRLEELHVIDVKFLYSCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFSKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDVNGSRYLLGDMEGRLFMLLLEKEEQMDGSVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KL  + + +GSYV V+E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLTAESNEQGSYVVVMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LR + D   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRVAADRDT 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +  E E+EET++ GF    QT FC +  + QL+Q+TS SVRLV+
Sbjct: 422  DDTLVLSFVGQTRVLTLTGE-EVEETDLAGFVDDQQTFFCGNVAHQQLIQITSASVRLVA 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G  V+V + N+ QVLLA G   L YLEI  G L ++   ++E+E++
Sbjct: 481  QNPQSLVSEWKEPQGRKVSVCSCNSRQVLLAVGR-VLYYLEIHPGELRQISCTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLD+ P+G + + S + A+G+WTDIS RI SLP   L+ KE LGGEIIPRS+L+ +FE  
Sbjct: 540  CLDVTPLGGSDTLSSLCAIGLWTDISARILSLPGFQLLHKEMLGGEIIPRSILMTSFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN  TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFSLNTDTGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLKNQ------------------------SCA----------- 738
             PR+IC+QE S+ F + S + +                        SC+           
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDASGGSSPLRPSASTQALSSSVSCSKLFSGSTSPHE 779

Query: 739  ----EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
                EE E+H + ++D  TFE + T+     EY  S++SC    D   Y+ VGTA V P+
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHTHQFLQNEYTLSLVSCKLGKDPTTYFVVGTAMVYPD 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYNDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSPPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   + +          +V++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRETTVDDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|90108797|pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
            Protein
 gi|90108798|pdb|2B5L|B Chain B, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
            Protein
 gi|90108801|pdb|2B5M|A Chain A, Crystal Structure Of Ddb1
 gi|116667897|pdb|2HYE|A Chain A, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
 gi|1136228|gb|AAA88883.1| UV-damaged DNA binding factor [Homo sapiens]
 gi|1588524|prf||2208446A xeroderma pigmentosum group E-binding factor
          Length = 1140

 Score = 1201 bits (3108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1146 (52%), Positives = 801/1146 (69%), Gaps = 69/1146 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTD-DP 412
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  + + 
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 413  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
            +DT LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLV
Sbjct: 422  YDT-LVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 532
            S   + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E+
Sbjct: 480  SQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEV 538

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            +CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE 
Sbjct: 539  ACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFES 598

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
              YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTV
Sbjct: 599  SHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV 658

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            IYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL 
Sbjct: 659  IYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLY 718

Query: 713  EHPRRICHQEQSRTFAICSLK--------------------------------------- 733
            E PR+IC+QE S+ F + S +                                       
Sbjct: 719  ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPH 778

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
              S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V P
Sbjct: 779  ETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYP 838

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W    D
Sbjct: 839  EEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKD 898

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
                +++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWM
Sbjct: 899  ----VRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 954

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            SAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM
Sbjct: 955  SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVM 1014

Query: 974  R-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
            + L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WR
Sbjct: 1015 QNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWR 1074

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVE 1082
            SF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VE
Sbjct: 1075 SFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVE 1134

Query: 1083 ELTRLH 1088
            ELTR+H
Sbjct: 1135 ELTRIH 1140


>gi|270346571|pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Hbx
 gi|270346573|pdb|3I7K|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Whx
 gi|270346575|pdb|3I7L|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Ddb2
 gi|270346577|pdb|3I7N|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdtc1
 gi|270346579|pdb|3I7O|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Iqwd1
 gi|270346581|pdb|3I7P|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr40a
 gi|270346583|pdb|3I89|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr22
 gi|270346585|pdb|3I8C|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr21a
 gi|270346587|pdb|3I8E|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr42a
 gi|270346588|pdb|3I8E|B Chain B, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr42a
          Length = 1143

 Score = 1201 bits (3108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1146 (52%), Positives = 801/1146 (69%), Gaps = 69/1146 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 6    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 65

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 66   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 125

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 126  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 185

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 186  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 244

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 245  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 304

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 305  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 364

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTD-DP 412
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  + + 
Sbjct: 365  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 424

Query: 413  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
            +DT LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLV
Sbjct: 425  YDT-LVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 482

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 532
            S   + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E+
Sbjct: 483  SQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEV 541

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            +CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE 
Sbjct: 542  ACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFES 601

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
              YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTV
Sbjct: 602  SHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV 661

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            IYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL 
Sbjct: 662  IYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLY 721

Query: 713  EHPRRICHQEQSRTFAICSLK--------------------------------------- 733
            E PR+IC+QE S+ F + S +                                       
Sbjct: 722  ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPH 781

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
              S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V P
Sbjct: 782  ETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYP 841

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W    D
Sbjct: 842  EEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKD 901

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
                +++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWM
Sbjct: 902  ----VRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 957

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            SAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM
Sbjct: 958  SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVM 1017

Query: 974  R-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
            + L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WR
Sbjct: 1018 QNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWR 1077

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVE 1082
            SF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VE
Sbjct: 1078 SFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVE 1137

Query: 1083 ELTRLH 1088
            ELTR+H
Sbjct: 1138 ELTRIH 1143


>gi|224050582|ref|XP_002191856.1| PREDICTED: DNA damage-binding protein 1 [Taeniopygia guttata]
          Length = 1140

 Score = 1201 bits (3107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1145 (52%), Positives = 800/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+ A
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++  + +S ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEELQV+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DNTLVLSFVGQTRVLMLNGE-EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N++QV++A G   L YLEI    L ++   ++E+E++
Sbjct: 481  QEPKSLVSEWKEPNGKNISVASCNSNQVVVAVGRA-LYYLEIRPQELRQISCTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F L+++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG  HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   + +          +V++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|221046721|pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex
 gi|221046723|pdb|3EI4|C Chain C, Structure Of The Hsddb1-Hsddb2 Complex
 gi|221046725|pdb|3EI4|E Chain E, Structure Of The Hsddb1-Hsddb2 Complex
          Length = 1158

 Score = 1201 bits (3107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1146 (52%), Positives = 801/1146 (69%), Gaps = 69/1146 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 21   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 80

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 81   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 140

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 141  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 200

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 201  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 259

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 260  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 319

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 320  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 379

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTD-DP 412
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  + + 
Sbjct: 380  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 439

Query: 413  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
            +DT LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLV
Sbjct: 440  YDT-LVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 497

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 532
            S   + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E+
Sbjct: 498  SQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEV 556

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            +CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE 
Sbjct: 557  ACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFES 616

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
              YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTV
Sbjct: 617  SHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV 676

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            IYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL 
Sbjct: 677  IYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLY 736

Query: 713  EHPRRICHQEQSRTFAICSLK--------------------------------------- 733
            E PR+IC+QE S+ F + S +                                       
Sbjct: 737  ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPH 796

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
              S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V P
Sbjct: 797  ETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYP 856

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W    D
Sbjct: 857  EEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKD 916

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
                +++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWM
Sbjct: 917  ----VRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 972

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            SAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM
Sbjct: 973  SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVM 1032

Query: 974  R-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
            + L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WR
Sbjct: 1033 QNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWR 1092

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVE 1082
            SF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VE
Sbjct: 1093 SFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVE 1152

Query: 1083 ELTRLH 1088
            ELTR+H
Sbjct: 1153 ELTRIH 1158


>gi|431910407|gb|ELK13480.1| DNA damage-binding protein 1 [Pteropus alecto]
          Length = 1143

 Score = 1201 bits (3106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1148 (52%), Positives = 800/1148 (69%), Gaps = 70/1148 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW-- 1031
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  +  
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSLYPS 1075

Query: 1032 -RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKR 1080
             RSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K 
Sbjct: 1076 QRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKV 1135

Query: 1081 VEELTRLH 1088
            VEELTR+H
Sbjct: 1136 VEELTRIH 1143


>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]
          Length = 1140

 Score = 1200 bits (3104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1145 (52%), Positives = 796/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H  +E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTGMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KG VYS+  FNGKLLA+IN  ++LY+W    D 
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGDVYSMVEFNGKLLASINSTVRLYEWTTEKD- 898

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
               +++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 899  ---VRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|440893607|gb|ELR46310.1| DNA damage-binding protein 1 [Bos grunniens mutus]
          Length = 1143

 Score = 1200 bits (3104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1148 (52%), Positives = 800/1148 (69%), Gaps = 70/1148 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGMSPLCAIGLWTDISARIAKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW-- 1031
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  +  
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSLYPS 1075

Query: 1032 -RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKR 1080
             RSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K 
Sbjct: 1076 QRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKV 1135

Query: 1081 VEELTRLH 1088
            VEELTR+H
Sbjct: 1136 VEELTRIH 1143


>gi|355683071|gb|AER97036.1| damage-specific DNA binding protein 1, 127kDa [Mustela putorius furo]
          Length = 1122

 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1113 (53%), Positives = 786/1113 (70%), Gaps = 57/1113 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEV 1108


>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 1148

 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1148 (51%), Positives = 802/1148 (69%), Gaps = 63/1148 (5%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRI 62
            +++YV TA K T+VTH+   +FTSP +LNL+IAKCT  E+HLLT +GLQP  D+ +YGRI
Sbjct: 2    VYSYVATAQKSTSVTHAFTAHFTSPTDLNLLIAKCTHFEVHLLTAEGLQPQHDIKMYGRI 61

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            A  E FRP GE QD++F+ T+R++FCVL +D    ++IT+A G + D IGR ++    G 
Sbjct: 62   AIFEKFRPSGETQDWIFLVTQRFQFCVLAYDTTLQQIITKANGSLRDTIGRNSEILTNGN 121

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQ-LKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IDPD RLIG+++Y+G FKVIP DN  + LK AFNIRL+EL++LDIKFLYG  KPTI VLY
Sbjct: 122  IDPDGRLIGMNIYEGYFKVIPIDNHSKSLKAAFNIRLDELRILDIKFLYGYNKPTICVLY 181

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            +D K ARHVKTY + LK+KDF EGPWSQ+N++ GA+LLIPVP P  GVLII  +TIVY +
Sbjct: 182  EDFKAARHVKTYFILLKEKDFAEGPWSQSNVEAGANLLIPVPMPYGGVLIISNQTIVYHN 241

Query: 242  ANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETS 301
               F AIP++ ++ + YG V  DGSR+LL D  G LH++ +  E ++V  + +E+LG+TS
Sbjct: 242  GTYFHAIPMQNTMIQVYGAVGDDGSRFLLADQYGALHVVALQTEGKEVLDVYLEVLGQTS 301

Query: 302  IASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER 361
            IAS +SYLDN VV++GS++GDSQL+KLN + D  GSY+EVL+ YVN+GPI+DFCV+DL+R
Sbjct: 302  IASCVSYLDNGVVFVGSTFGDSQLVKLNSKRDESGSYIEVLDSYVNIGPIIDFCVMDLDR 361

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSF 421
            QGQGQ+VTCSGA KDGSLR++RNGIGINEQAS EL GIKGMW+LR S    +D +LV S+
Sbjct: 362  QGQGQIVTCSGADKDGSLRVIRNGIGINEQASAELPGIKGMWALRESLASEYDKYLVQSY 421

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            ++E RI+ +   DE+EE EIE F    +TL+C +   +  +QVT   VR++ + +  +  
Sbjct: 422  LNEIRIMTIGDSDEMEEVEIEAFL-DAKTLYCRNVNEDGWLQVTETEVRIIDAQTTSICC 480

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP-- 539
             W  PP   + VA+AN +Q++LAT    L+Y+EI D  L E    ++E+EI+C+D++P  
Sbjct: 481  GWIPPPSTRITVASANPTQIVLATSSKVLIYMEILDKQLMEKARKEMEFEIACIDLSPRL 540

Query: 540  -------------------------IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE 574
                                        N   + I AVG WT  SV + SLP L+ ++KE
Sbjct: 541  DQIDPPALTRSSQVMDEAMEDAIVSRDANALRTSICAVGFWTSSSVCVLSLPSLDELSKE 600

Query: 575  HLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
                +++PRSVL  +FE   YLL  LGDG L+   L+ + G L++RK++SLGTQPI+L  
Sbjct: 601  TFDKDLLPRSVLCASFEDSDYLLIGLGDGSLVTCHLDREFGTLSERKRISLGTQPISLSA 660

Query: 635  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
            F SK+  HVFA+ DRPTVIY + KKLLYSNVN KEV+ M  F+S  FP+ LA+A   ELT
Sbjct: 661  FWSKDKLHVFASCDRPTVIYYNKKKLLYSNVNAKEVAVMSTFHSEVFPECLALASGSELT 720

Query: 695  IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMHFVRLLDDQ 752
            IGT+DDIQKLHI+S  L E  RRI H  +SRT  + ++K       +E E  ++RL DDQ
Sbjct: 721  IGTVDDIQKLHIQSFHLNEWARRIAHDSRSRTLGVATVKLSKDDGGDEVEQGYIRLFDDQ 780

Query: 753  TFEFISTYPLDTFEYGCSILSCSFSDDSN--VYYCVGTAYVLPEENEPTKGRILVFIVE- 809
            TFE + ++ LD FE  CSI++C F+ DS+   YY VGTA+V  EE EP +GRILVF V  
Sbjct: 781  TFECLKSFRLDPFESPCSIITCIFTGDSSGGTYYVVGTAFVHEEEAEPHQGRILVFTVSG 840

Query: 810  ---DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 866
               D +LQL+ EKE KG+VY LNAFNGKLLA +N K+ L+KW   ++   EL SECGHHG
Sbjct: 841  IHGDRRLQLVTEKEVKGSVYCLNAFNGKLLAGVNSKVYLFKWSESEENGEELVSECGHHG 900

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
            H L LY+++RGDFIVVGDLMKSISLL +K  +G+IEE ARD N+NWM+AV I+DDD Y+G
Sbjct: 901  HTLVLYMESRGDFIVVGDLMKSISLLNHKQLDGSIEEIARDLNSNWMTAVGIIDDDNYVG 960

Query: 927  AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP-- 984
            +E +FNLFTV++NS  A+DEERGRLE +GEYHLGEFVNRFR+GSLVM+   S   + P  
Sbjct: 961  SETDFNLFTVQRNSGAASDEERGRLETIGEYHLGEFVNRFRYGSLVMQHNLSIGAEAPGI 1020

Query: 985  -----------------TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
                             +++FGTV+G+IGVI  +  E++ FL ++Q+ L +VI+GVGG +
Sbjct: 1021 SLSDDRPESLSPLSVQRSMLFGTVSGMIGVILPISKEKHEFLMRVQSALNQVIQGVGGFS 1080

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-------VSVEELCKR 1080
            H +WR+F N + +++A NF+DGDLIESFLDLS+  M ++   +N        ++E L  R
Sbjct: 1081 HSEWRTFENRRSSIEAHNFIDGDLIESFLDLSKDEMKQVVDELNRDQLEGKTTLEALAAR 1140

Query: 1081 VEELTRLH 1088
            +EEL+++H
Sbjct: 1141 IEELSQMH 1148


>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
          Length = 1160

 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1168 (51%), Positives = 813/1168 (69%), Gaps = 95/1168 (8%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NYVVTAHKPT V     GNFTSP +LNLIIA+ TR+EI+++TP+GL+P+ +V +YGRIA 
Sbjct: 4    NYVVTAHKPTAVNACVTGNFTSPDDLNLIIARNTRMEIYVVTPEGLRPVKEVGVYGRIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQ--WDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +ELFRP GE++D +F+ T+RY   +L+   + E+ ++ITRA G+V D+IGR ++ G IGI
Sbjct: 64   MELFRPPGESKDLMFLLTQRYNAMILECNQNGENIDIITRAHGNVQDKIGRASETGIIGI 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP CR+IGL LYDGLFKVIP +   +  +AFNIRLEEL V+DI+FL+GC  PT+++++Q
Sbjct: 124  IDPLCRVIGLRLYDGLFKVIPLERDNKELKAFNIRLEELTVIDIQFLHGCTTPTLILIHQ 183

Query: 183  DN--------------------KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
             N                    +  RHVKTYE++L+DK+F +GPW Q+N++  A +LI V
Sbjct: 184  ANLNCYHLMTLCITNLLSFKQDQHGRHVKTYEISLRDKEFQKGPWKQDNVETEACMLIAV 243

Query: 223  PPPLCGVLIIGEETIVYCSANAFKAIPIRPSITK-----AYGRVDADGSRYLLGDHAGLL 277
            P P  G LIIG+E+I Y   + F  IPI P   K      YG+VDA+GSRYLLGD  G L
Sbjct: 244  PEPFGGALIIGQESITYHKGDNF--IPIAPPAIKQSTLTCYGKVDANGSRYLLGDMMGRL 301

Query: 278  HLLVITHEKE-----KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP 332
             +L++  E++      V  LK+ELLGET+IA  I+YLDNAVVYIGS  GDSQL+KLN++P
Sbjct: 302  FMLMLEKEEKMDSTVTVKDLKVELLGETTIAECITYLDNAVVYIGSRLGDSQLVKLNVEP 361

Query: 333  DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 392
            D  GSYV+ +ER+ NLGPI+D CVVDLERQGQGQ+VTCSGAYK+GSLRI+RNGIGI+E A
Sbjct: 362  DENGSYVQEMERFTNLGPILDMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHA 421

Query: 393  SVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF 452
            S++L GIKG+WSLR ++ + +D  +V+SF+ +TR+L +N E E+EETE+ G  S  QT  
Sbjct: 422  SIDLPGIKGIWSLRVNSPE-YDNMIVLSFVGQTRVLMLNGE-EVEETELSGIESDQQTFL 479

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 512
            C + ++NQL+Q+T  SVRL+S  +++L  EWK   G ++++A++N  QV+ A  G  L Y
Sbjct: 480  CANVVHNQLLQITPQSVRLISCDNQKLLKEWKHSGGKNISLASSNTCQVV-ACVGSELYY 538

Query: 513  LEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT 572
            LE+  G + +V  + +E+E++C+D+ P+ E    S + A+G+WTDIS R+ SLPD N + 
Sbjct: 539  LELLQGDIKQVSTSTMEHEVACVDLTPLREGEEKSHLCAIGLWTDISARVLSLPDFNSLH 598

Query: 573  KEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
             E LGGEIIPRS+L+  FEGI YLLCALGDG L  F  N+ TG  T+++KV+LGTQP  L
Sbjct: 599  VEMLGGEIIPRSILMTTFEGIHYLLCALGDGSLFYFNFNIDTGYFTEKRKVTLGTQPTVL 658

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
            RTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMCP NS  +PDSLA+A +G 
Sbjct: 659  RTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDGT 718

Query: 693  LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------------------- 733
            LTIGTID+IQKLHIR+IPLGE PRRI +QE S+TF + S++                   
Sbjct: 719  LTIGTIDEIQKLHIRTIPLGESPRRIAYQESSQTFGVISMRMDLQDSNGLNPTRPSASTH 778

Query: 734  --------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
                                  S  +E E+H + ++D  TFE + ++ L   E+  S++S
Sbjct: 779  AAMMSSSSSGKVTMGTSTMGEHSAGDEVEVHSLLIIDQHTFEVLHSHQLMPNEFATSLIS 838

Query: 774  CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNG 833
                +D   YY VGTA V PEE EP +GRI++F   +GKL  IAEKE KGA Y+L  FNG
Sbjct: 839  ARLGEDPCNYYIVGTALVHPEEAEPKQGRIVIFHFHEGKLNQIAEKEIKGAAYTLVEFNG 898

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            KLLA+IN  ++L++W       +EL+ EC +   I+ALY++T+GDFI+VGDLM+SI+LL+
Sbjct: 899  KLLASINSTVRLFEWTT----DKELRLECNYFNSIVALYLKTKGDFILVGDLMRSITLLL 954

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            YK  EG  EE ARD N NW +AVEILDDD +LGAEN+FNLFT +K+S   TDE+R  L+ 
Sbjct: 955  YKPMEGTFEEIARDCNPNWTTAVEILDDDNFLGAENSFNLFTCQKDSASTTDEDRQNLQE 1014

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLE 1010
            VG +HLGEFVN FRHGSLVM+   S     PT   V++GTVNG +G++  +P E Y FL+
Sbjct: 1015 VGMFHLGEFVNVFRHGSLVMQ--HSGETSTPTQGSVLYGTVNGAVGLVTQVPQEFYSFLQ 1072

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             +Q+ L KVIK VG + H  WRSF+ E+KT   + F+DGDLIESFLDL+R +M E  K +
Sbjct: 1073 DIQSRLAKVIKSVGKIEHSFWRSFHTERKTEACEGFIDGDLIESFLDLNRDKMQETVKGL 1132

Query: 1071 NV----------SVEELCKRVEELTRLH 1088
             +          +V++L K +EELTR+H
Sbjct: 1133 QIDDGSGMKREATVDDLVKTIEELTRIH 1160


>gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score = 1197 bits (3098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1145 (52%), Positives = 795/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
              LLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HCLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR+ PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTDPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++   TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIGQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP  GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKLGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
          Length = 1181

 Score = 1196 bits (3095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1186 (51%), Positives = 821/1186 (69%), Gaps = 108/1186 (9%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTAHKPT V+    GNFTSP ++NLI+AK TR+EI++++P+GL+P+ ++ IYGRI+
Sbjct: 3    YNYVVTAHKPTGVSACATGNFTSPDDINLILAKNTRLEIYVVSPEGLRPVKEIGIYGRIS 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQ--WDAESSELITRAMGDVSDRIGRPTDNGQIG 121
             ++L+RP GE +D LF  T +Y   +L+     +S E+IT+A G+++D   RP++ G IG
Sbjct: 63   IMKLYRPAGEKKDLLFFLTAKYNAAILECVQYGDSIEIITKAHGNIADTFSRPSETGNIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIR+EEL V D++FL+GC  PTIV+L+
Sbjct: 123  IIDPECRVIGLRLYDGLFKVIPLDKDNRELKAFNIRMEELTVQDMEFLHGCKTPTIVLLH 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD++ ARH+KTYEV+LKDK+FV+GPW Q+++++ A+L+I VP P CG LIIG+E+I Y +
Sbjct: 183  QDSQ-ARHMKTYEVSLKDKEFVKGPWKQDHVESEANLVIAVPEPFCGALIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHE------------- 285
             + +  I    IR S    YG+VDA+GSRYLLGD AG L +L++  E             
Sbjct: 242  GDQYVVITPHLIRQSTIVCYGKVDANGSRYLLGDMAGRLFMLLLEREDKMDGTXYLLGDM 301

Query: 286  -----------KEKVTG------LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
                       ++K+ G      LK+E LGE +IA  I+YLDN VVY+GS  GDSQLIKL
Sbjct: 302  AGRLFMLLLEREDKMDGTTTVKDLKLEFLGEITIAECITYLDNGVVYVGSRLGDSQLIKL 361

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI 388
            + + + +GS+VE++E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI
Sbjct: 362  HAERNDQGSFVEIMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGI 421

Query: 389  NEQASVELQGIKGMWSLR---------SSTDDPFDTF-----LVVSFISETRILAMNLED 434
            +E AS++L GIKGMW LR             DP D+      LV+SF+ +TR+L ++ E 
Sbjct: 422  HEHASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVRQTRVLMLSGE- 480

Query: 435  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            E+EETE+ GF +  QT FC +    QL+QVT+ +VRLV S +++L NEWK P   +++V 
Sbjct: 481  EVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQTKQLLNEWKPPGARNISVV 540

Query: 495  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
            T N SQV+ A     +  LEIGDG+L ++ +A+LE E++CLDI P+ E    + + AVG+
Sbjct: 541  TCNQSQVVCAVRK-EVFCLEIGDGVLNQISNAELENEVACLDITPLSEKAEKATLCAVGL 599

Query: 555  WTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT 614
            WTDIS+RI SLP L  + KE++GGEIIPRS+L+  FEGI YLLCALGDG L  FLL   T
Sbjct: 600  WTDISIRILSLPSLQQLQKENIGGEIIPRSILITTFEGIHYLLCALGDGSLFYFLLEATT 659

Query: 615  GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 674
            G LTDRKKV+LGTQP  L+TF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV+HMC
Sbjct: 660  GALTDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMC 719

Query: 675  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK- 733
            P NS  +PDSLA+A +  L IGTID+IQKLHIR++PLGE PRRI +QE ++TF + +++ 
Sbjct: 720  PLNSEGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLGELPRRIAYQEATQTFGVITIRN 779

Query: 734  ----------------------------------------NQSCAEESEMHFVRLLDDQT 753
                                                    N    +E E+H + ++D  T
Sbjct: 780  DILGSSGLTPVRPSASTQAQNVTHSAQMSSIFKPGSVSTGNDQLGQEVEIHNLLIIDQHT 839

Query: 754  FEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKL 813
            FE +  +     EY  SI+S    +D N YY VGTA VLP+E++P +GRI+VF   DGKL
Sbjct: 840  FEVLHAHQFMQTEYAMSIVSTRLGNDPNTYYIVGTANVLPDESDPKQGRIVVFHWVDGKL 899

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV 873
            + +AE+E KGA YS+  FNGKLLAAIN  ++L++W    +  REL++EC H  +ILALY+
Sbjct: 900  EHVAEQEIKGAPYSMLEFNGKLLAAINSTVRLFEW----NAERELRNECSHFNNILALYL 955

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            + +GDF++VGDLM+S+SLL YK  EG  EE ARDY  NWMS+VEILDDD +LGAE+  NL
Sbjct: 956  RAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEILDDDTFLGAESTTNL 1015

Query: 934  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFGTVN 992
            F  +K+S   TDEER  L+ VG++HLGEFVN FRHGSLVM+ P ++      +V+FGT++
Sbjct: 1016 FVCQKDSAATTDEERQHLQEVGQFHLGEFVNVFRHGSLVMQHPGETSSPTQGSVLFGTIH 1075

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
            G IG+++ LP + Y FL ++Q  L KVIK VG ++H  WRSF+ E+KT  A  F+DGDLI
Sbjct: 1076 GAIGLVSQLPADFYTFLSEVQEKLTKVIKSVGKIDHAFWRSFSTERKTEPAVGFIDGDLI 1135

Query: 1053 ESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 1088
            ESFLDLSR +M E+ + +          + SV++L K +EEL+R+H
Sbjct: 1136 ESFLDLSRDKMQEVVQGIQMDDGSGMKRDASVDDLIKIIEELSRIH 1181


>gi|444513057|gb|ELV10249.1| DNA damage-binding protein 1 [Tupaia chinensis]
          Length = 1146

 Score = 1195 bits (3091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1151 (52%), Positives = 798/1151 (69%), Gaps = 73/1151 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSSGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL------N 1027
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK    +      +
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKRCFQISPNSLTD 1075

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEEL 1077
               WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L
Sbjct: 1076 MSTWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDL 1135

Query: 1078 CKRVEELTRLH 1088
             K VEELTR+H
Sbjct: 1136 IKVVEELTRIH 1146


>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
          Length = 1140

 Score = 1194 bits (3089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/1145 (52%), Positives = 800/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++  + ES ++ITRA G+V D IGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVKDPIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            I+DP+CR+IGL LYDGLFKVIP D   +  +A+NIRLEELQV+D+ FLYGC  PT+  +Y
Sbjct: 123  IVDPECRMIGLRLYDGLFKVIPLDRDNRELKAYNIRLEELQVIDVHFLYGCQAPTVCFIY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E+       +  L 
Sbjct: 242  GDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDLH 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GD QL+KLN+  + +GS+V V+E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDPQLVKLNVDSNDQGSFVTVMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L ++ E E+EETE+ GF    QT +C +  +NQL+Q+TSGSVRLV 
Sbjct: 422  DDMLVLSFVGQTRVLMLSGE-EVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVRLVL 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              S+ L +EWK P G +++VA  N +QV+LA G   L YL+I  G L ++   ++E+E++
Sbjct: 481  QDSKALVSEWKEPQGRNISVAACNHTQVVLAVGRA-LYYLQILAGELKQISTTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+GE  + S + AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FEG 
Sbjct: 540  CLDITPLGEAGAESPLCAVGLWTDISARVLKLPCFTPLHKEMLGGEIIPRSILMTTFEGS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F L+++TG L++ KKV+LGTQP  LRTF S +T++VFA SDRPTVI
Sbjct: 600  YYLLCALGDGALFYFGLDLQTGALSECKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PRRIC+QE S+ F + S +                                        
Sbjct: 720  SPRRICYQEVSQCFGVLSSRVEIQDVSGTTSPVRPSASTQALSSSMSSSKLFPSSTSPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D +VY+ VGTA V PE
Sbjct: 780  SSFGEEVEIHSLLVVDQHTFEVLHAHQFLPSEYALSMVSCRLGKDPSVYFVVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896  EKELRTECSHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDE+R  L+ VG +HLGEFVN F HGSLV++
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEDRQHLQEVGVFHLGEFVNVFCHGSLVLQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+FGTV G+IG++ SL    +  L  LQ  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLFGTVTGMIGLVTSLSEGWHSLLLDLQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEE 1083
            F+ E+KT  AK F+DGDLIESFLDL R +M E+  T+ +          +V+E+ K VEE
Sbjct: 1076 FHTERKTEQAKGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|119594342|gb|EAW73936.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_d [Homo
            sapiens]
          Length = 1146

 Score = 1194 bits (3089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1151 (52%), Positives = 797/1151 (69%), Gaps = 73/1151 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK-----GVGGLNH 1028
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK         L H
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKRCFLISTCSLTH 1075

Query: 1029 -EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEEL 1077
               WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L
Sbjct: 1076 PSTWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDL 1135

Query: 1078 CKRVEELTRLH 1088
             K VEELTR+H
Sbjct: 1136 IKVVEELTRIH 1146


>gi|81868411|sp|Q9ESW0.1|DDB1_RAT RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|9843869|emb|CAB89874.2| damage-specific DNA binding protein 1 [Rattus norvegicus]
          Length = 1140

 Score = 1193 bits (3086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1145 (52%), Positives = 796/1145 (69%), Gaps = 67/1145 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS +++NL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDINLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQ +KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQPVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPRAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLD+ P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDVTPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGT+++IQKLHIR++P+ E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANTSTLTIGTMNEIQKLHIRTVPIYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSTRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSAAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF    GKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSGGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
             L ++      +V+ GTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRS
Sbjct: 1016 NLGETSTPTQGSVLLGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRS 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEE 1083
            F+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEE
Sbjct: 1076 FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEE 1135

Query: 1084 LTRLH 1088
            LTR+H
Sbjct: 1136 LTRIH 1140


>gi|355752055|gb|EHH56175.1| Damage-specific DNA-binding protein 1, partial [Macaca fascicularis]
          Length = 1125

 Score = 1186 bits (3068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1127 (52%), Positives = 788/1127 (69%), Gaps = 67/1127 (5%)

Query: 22   GNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIA 81
            G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA +ELFRP GE++D LFI 
Sbjct: 6    GHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFIL 65

Query: 82   TERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLF 139
            T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IGIIDP+CR+IGL LYDGLF
Sbjct: 66   TAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLF 125

Query: 140  KVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKD 199
            KVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +YQD +  RHVKTYEV+L++
Sbjct: 126  KVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQ-GRHVKTYEVSLRE 184

Query: 200  KDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITK 256
            K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y + + + AI    I+ S   
Sbjct: 185  KEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIV 244

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDN 311
             + RVD +GSRYLLGD  G L +L++  E++      +  L++ELLGETSIA  ++YLDN
Sbjct: 245  CHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDN 304

Query: 312  AVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCS 371
             VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCS
Sbjct: 305  GVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCS 364

Query: 372  GAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            GA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N
Sbjct: 365  GAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLN 424

Query: 432  LEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
             E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   ++
Sbjct: 425  GE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNI 483

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAA 551
            +VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A
Sbjct: 484  SVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCA 542

Query: 552  VGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLN 611
            +G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN
Sbjct: 543  IGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 602

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
            ++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+
Sbjct: 603  IETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVN 662

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 731
            +MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S
Sbjct: 663  YMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLS 722

Query: 732  LK---------------------------------------NQSCAEESEMHFVRLLDDQ 752
             +                                         S  EE E+H + ++D  
Sbjct: 723  SRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQH 782

Query: 753  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK 812
            TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGK
Sbjct: 783  TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK 842

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            LQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY
Sbjct: 843  LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALY 898

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            ++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FN
Sbjct: 899  LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFN 958

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTV 991
            LF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTV
Sbjct: 959  LFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTV 1018

Query: 992  NGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
            NG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDL
Sbjct: 1019 NGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDL 1078

Query: 1052 IESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 1088
            IESFLD+SR +M E+   +            + ++L K VEELTR+H
Sbjct: 1079 IESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1125


>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
 gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
          Length = 1148

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1156 (51%), Positives = 808/1156 (69%), Gaps = 81/1156 (7%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTAHKPT V     GNFTSP ++NLI+AK TR+EI++++P+GL+P+ ++ IYGRI+
Sbjct: 3    YNYVVTAHKPTGVCACVTGNFTSPNDINLILAKNTRLEIYVVSPEGLRPVKEIGIYGRIS 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESS----ELITRAMGDVSDRIGRPTDNGQ 119
             ++LFRP GE +D LF  T +Y   +L+   +      E+IT+A G+++D   RP++ G 
Sbjct: 63   IMKLFRPPGEKKDLLFFLTAKYNAAILECIQDGGDGGVEIITKAHGNIADSFSRPSETGN 122

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVV 179
            IGIIDP+CR+IGL LYDGLFKVIP D   +  +AFNIR+EEL V D++FL+GC  PTIV+
Sbjct: 123  IGIIDPECRVIGLRLYDGLFKVIPLDRDNRELKAFNIRMEELTVQDMEFLHGCKTPTIVL 182

Query: 180  LYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
            L+QD++ ARH+KTYE++LKDK+FV+GPW Q+++++ A ++I VP P C    IG+E+I Y
Sbjct: 183  LHQDSQ-ARHMKTYEISLKDKEFVKGPWKQDHVESEATIVIAVPEPFCDARCIGQESITY 241

Query: 240  CSANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTG 291
             + +    I    IR S    YG+VDA+GSRYLLGD AG L +L++  E +      V  
Sbjct: 242  HNGDQDVVITPHLIRQSTIVCYGKVDANGSRYLLGDMAGRLFMLLLEREDKMDGTTTVKD 301

Query: 292  LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
            LK+E LGE +IA  ++YLDN VVY+GS  GDSQLIKLN + + +GSYVEV+E + NLGPI
Sbjct: 302  LKLEFLGEITIAECMTYLDNGVVYVGSRLGDSQLIKLNSERNEQGSYVEVMEVFTNLGPI 361

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD 411
            VD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LR +TD 
Sbjct: 362  VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLRVNTDS 421

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
              D  LV+SF+ +TR+L ++ E E+EETE+ GF    QT FC +   NQL+QVT+ +VRL
Sbjct: 422  SRDNTLVLSFVGQTRVLMLSGE-EVEETELAGFDISQQTFFCGNVRNNQLIQVTAAAVRL 480

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            V   ++ L NEWK P G +++V T N +QV+ A     +  LEI DG L +  +A++E E
Sbjct: 481  VDGKTKLLLNEWKPPGGKNISVVTCNQNQVVCAVRQ-EVFCLEIADGTLKQTSNAEMENE 539

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            ++CLDI P+ +    S + AVG+WTDIS+R+  LP L  + KE++GGEIIPRS+L+  FE
Sbjct: 540  VACLDITPLNDGSGKSDLCAVGLWTDISIRVLRLPSLEQLQKENIGGEIIPRSILMTTFE 599

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
            G+ YLLCALGDG L  FLL+  TG ++DRKKV+LGTQP  L+TF S +T++VFA SDRPT
Sbjct: 600  GVHYLLCALGDGSLFYFLLDASTGAVSDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPT 659

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            VIYSSN KL++SNVNLKEV+HMCP NS  +PDSLA+A +G L IGTID+IQKLHIR++PL
Sbjct: 660  VIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDGTLLIGTIDEIQKLHIRTVPL 719

Query: 712  GEHPRRICHQEQSRTFAICSLK-------------------------------------- 733
            GE   RI +QE ++TF + +++                                      
Sbjct: 720  GE---RIAYQEATQTFGVITIRNDIQGTGGLTPVRPSASTQAQNVTYSSTMSSVFKPGTG 776

Query: 734  --NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 791
              N    +E E+H + ++D  TFE +  +     EY  SI+S     D NVY+ VGTA V
Sbjct: 777  SGNDQLGQEVEVHNLLIVDQHTFEVLHAHQFMQTEYAMSIVSTRLGSDPNVYFIVGTAIV 836

Query: 792  LPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
            LP+E++P +GRI++F   DGKLQ +AEKE KGA YSL  FNGKLLA+IN  ++L++W   
Sbjct: 837  LPDESDPKQGRIIIFHWVDGKLQQVAEKEIKGAPYSLLEFNGKLLASINSTVRLFEW--- 893

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
             +  REL +EC H  +ILALY++T+GDFI+VGDLM+S+SLL YK  EG+ EE ARDY  N
Sbjct: 894  -NAERELHNECSHFNNILALYLKTKGDFILVGDLMRSMSLLAYKPLEGSFEEIARDYQTN 952

Query: 912  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 971
            WM AVEILDDD +LGAE+  NLF  +K+S   TDE+R  L+ VG++HLGEFVN FRHGSL
Sbjct: 953  WMCAVEILDDDTFLGAESTTNLFVCQKDSAATTDEDRQHLQEVGQFHLGEFVNIFRHGSL 1012

Query: 972  VMRLP-DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE- 1029
            VM+ P ++      +V+FGT++G IG++A LP + Y FL ++Q NL KVIK VG ++H  
Sbjct: 1013 VMQHPGEASSPTQGSVLFGTIHGAIGLVAQLPSDFYNFLLEVQGNLTKVIKSVGKIDHTL 1072

Query: 1030 -------QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NV 1072
                    WRSF+ E+KT  A+ F+DGDLIESFLDLSR +M E+ + +          + 
Sbjct: 1073 YPFVRLFTWRSFSTERKTEQAQGFIDGDLIESFLDLSRDKMQEVLQGIQMDDGSGMKRDA 1132

Query: 1073 SVEELCKRVEELTRLH 1088
            +V++L K +EEL+R+H
Sbjct: 1133 TVDDLIKIIEELSRVH 1148


>gi|281345356|gb|EFB20940.1| hypothetical protein PANDA_015888 [Ailuropoda melanoleuca]
          Length = 1124

 Score = 1179 bits (3049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1129 (52%), Positives = 788/1129 (69%), Gaps = 69/1129 (6%)

Query: 22   GNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIA 81
            G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA +ELFRP GE++D LFI 
Sbjct: 3    GHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFIL 62

Query: 82   TERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLF 139
            T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IGIIDP+CR+IGL LYDGLF
Sbjct: 63   TAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLF 122

Query: 140  KVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKD 199
            KVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +YQD +  RHVKTYEV+L++
Sbjct: 123  KVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQ-GRHVKTYEVSLRE 181

Query: 200  KDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITK 256
            K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y + + + AI    I+ S   
Sbjct: 182  KEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIV 241

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDN 311
             + RVD +GSRYLLGD  G L +L++  E++      +  L++ELLGETSIA  ++YLDN
Sbjct: 242  CHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDN 301

Query: 312  AVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCS 371
             VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCS
Sbjct: 302  GVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCS 361

Query: 372  GAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            GA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N
Sbjct: 362  GAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLN 421

Query: 432  LEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
             E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G ++
Sbjct: 422  GE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNI 480

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAA 551
            +VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A
Sbjct: 481  SVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCA 539

Query: 552  VGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLN 611
            +G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN
Sbjct: 540  IGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 599

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
            ++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+
Sbjct: 600  IETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVN 659

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 731
            +MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S
Sbjct: 660  YMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLS 719

Query: 732  LK---------------------------------------NQSCAEESEMHFVRLLDDQ 752
             +                                         S  EE E+H + ++D  
Sbjct: 720  SRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQH 779

Query: 753  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK 812
            TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGK
Sbjct: 780  TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK 839

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            LQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY
Sbjct: 840  LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALY 895

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            ++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FN
Sbjct: 896  LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFN 955

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTV 991
            LF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTV
Sbjct: 956  LFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTV 1015

Query: 992  NGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG-GLNH-EQWRSFNNEKKTVDAKNFLDG 1049
            NG+IG++ SL    Y  L  +Q  L KVIK +   L H   WRSF+ E+KT  A  F+DG
Sbjct: 1016 NGMIGLVTSLSESWYNLLLDMQNRLNKVIKNITHSLTHLSTWRSFHTERKTEPATGFIDG 1075

Query: 1050 DLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 1088
            DLIESFLD+SR +M E+   +            + ++L K VEELTR+H
Sbjct: 1076 DLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1124


>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1123

 Score = 1177 bits (3046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1101 (53%), Positives = 767/1101 (69%), Gaps = 76/1101 (6%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            +S +NY+VTAH P+ VTH   GNFT+P E NLIIAK TRIEIH +   G+  +LD  +YG
Sbjct: 24   LSPFNYIVTAHPPSVVTHVVTGNFTAPHERNLIIAKSTRIEIHTIAADGIHGLLDAGMYG 83

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            RIA ++LFRP    QD LFI TERY F VL +DA++ EL+T+A GD+ D+ G P D G I
Sbjct: 84   RIAIMQLFRPPNAQQDLLFICTERYAFTVLAYDAQTGELVTKANGDLQDKSGNPADLGPI 143

Query: 121  GIIDPDCRL------------------------------IGLHLYDGLFKVIPFDNKGQL 150
            G+IDPDCRL                              IGL LY+G+FKVIP D  GQ 
Sbjct: 144  GVIDPDCRLIGENAALDLWGGGHPPFYFGCSCSLRLVVWIGLRLYNGMFKVIPIDPHGQF 203

Query: 151  KEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQN 210
            K+AFNIRLEELQV DIKFL G  +PTI+VLYQD K+ RHVKTY+V LK+K+F EGPW+QN
Sbjct: 204  KDAFNIRLEELQVFDIKFLRGYDRPTILVLYQDTKETRHVKTYQVLLKEKEFAEGPWAQN 263

Query: 211  NLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLL 270
            N++ GA LLIPV  PL GVLI+GE+TI Y S +AF+++ +RP+I K Y  +D +  R+LL
Sbjct: 264  NVEGGASLLIPVLMPLGGVLIVGEQTITYHSGSAFRSVAMRPAIIKCYSVIDTN--RFLL 321

Query: 271  GDHAGLLHLLVITHEKE-KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN 329
             D  G L  +++TH+++ KVT +KI+ LG TSI S ++YLDN VV+ GS +GDSQL++L 
Sbjct: 322  ADSEGNLLSVLLTHDRQDKVTAIKIDRLGVTSILSCLTYLDNGVVFGGSQFGDSQLLRLA 381

Query: 330  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 389
             + D  GS+V VLE + NLGPI D  VVDLERQGQ QVVTCSGA+KDGSLR+VRNG+GI 
Sbjct: 382  TERDETGSFVRVLESFSNLGPICDMAVVDLERQGQCQVVTCSGAFKDGSLRVVRNGVGIE 441

Query: 390  EQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 449
            EQA++EL GIKG+WSL+ +    + + LVVSFI ETR+L M+  +ELEE +I G    +Q
Sbjct: 442  EQATIELPGIKGIWSLKPTEAALYRSILVVSFIGETRLLGMSSGEELEEMQIPGLDQNSQ 501

Query: 450  TLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW-------KSPPGYSVNVATANASQVL 502
            TL C +   +Q +QVT+  VRLV+ +++ L   W       +  PG  + +A++N  QVL
Sbjct: 502  TLHCANVSGDQFLQVTATEVRLVNCSTQALVASWSPASVPDRYAPGTRITMASSNDFQVL 561

Query: 503  LATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 561
            +A GGGHLV L +   G L  + HA++++EI+C+DI PIG  P  SQ+ AVG+WTDI+VR
Sbjct: 562  VACGGGHLVCLSVEASGNLVPIGHARMDHEIACVDITPIGGQP-LSQVCAVGLWTDITVR 620

Query: 562  IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 621
            + S+P L  +  + L G+IIPRS+L+  FEG   LLCALGDG +  +  ++ + +LTD K
Sbjct: 621  VLSVPTLEQVLVQPLEGQIIPRSILMATFEGQPRLLCALGDGSMHTYSFDVLSQQLTDHK 680

Query: 622  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 681
            +VSLGTQPI L  F S+  THVFA SDRPTVIYSSN+KLLYSNVNL+EV+H+CPF S +F
Sbjct: 681  RVSLGTQPILLSAFVSRGQTHVFACSDRPTVIYSSNRKLLYSNVNLREVTHVCPFTSESF 740

Query: 682  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-------- 733
             D LA+     LTIGTID+IQKLH+R+IPLGE PRRI + E +RT+ + ++         
Sbjct: 741  ADCLAVVSSTSLTIGTIDEIQKLHVRAIPLGEMPRRIAYHEPTRTYGVATVTLAEPLPVG 800

Query: 734  ----NQSCAEES------------------EMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
                N +   ++                  +  FVRL D QTFE   ++ L + E   S 
Sbjct: 801  SNSGNVAARAQNVRPMAFDDGPRSPSDVLEDTSFVRLFDGQTFEIRDSFQLPSTETIMSF 860

Query: 772  LSCSF---SDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSL 828
            +SCSF   S DS VY  VGTA+V+P E+EP +GRILVF V  G L L+  K+ KG VYSL
Sbjct: 861  ISCSFANDSSDSTVYLVVGTAFVIPSEDEPKRGRILVFDVAGGALHLVTAKDVKGCVYSL 920

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
            NAFNGKLLA IN K+ L+KW L  DG REL SEC HHGHIL LY+++RGDFI+VGDLM+S
Sbjct: 921  NAFNGKLLAGINSKVNLFKWNLTGDGIRELVSECSHHGHILTLYLKSRGDFIIVGDLMRS 980

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 948
            ISLL+YK    +IEE A+D   NW++AV++LDDD+++G E++FN+FT R+N E +TDEER
Sbjct: 981  ISLLMYKSGTSSIEEIAQDTCPNWVTAVDMLDDDVFIGGESSFNIFTCRRNLEASTDEER 1040

Query: 949  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHEQYL 1007
             RLEVVGE+H+GEF+N+FR GSLVM+LPD     I P+ +FGT NGVIGVIA L   QY 
Sbjct: 1041 KRLEVVGEFHVGEFINQFRAGSLVMKLPDEQEQPIQPSTLFGTGNGVIGVIARLTRSQYE 1100

Query: 1008 FLEKLQTNLRKVIKGVGGLNH 1028
            FL+ +Q  + KVIKGVGGLNH
Sbjct: 1101 FLQLVQAAMAKVIKGVGGLNH 1121


>gi|449283451|gb|EMC90093.1| DNA damage-binding protein 1 [Columba livia]
          Length = 1140

 Score = 1174 bits (3036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1138 (52%), Positives = 790/1138 (69%), Gaps = 78/1138 (6%)

Query: 22   GNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIA 81
            G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA +ELFRP GE++D LFI 
Sbjct: 10   GHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFIL 69

Query: 82   TERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLF 139
            T +Y  C+L++  + +S ++ITRA G+V DRIGRP++ G IGIIDP+CR+IGL LYDGLF
Sbjct: 70   TAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLF 129

Query: 140  KVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKD 199
            KVIP D + +  +AFNIRLEELQV+D+KFLYGC  PTI  +YQD +  RHVKTYEV+L++
Sbjct: 130  KVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQ-GRHVKTYEVSLRE 188

Query: 200  KDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITK 256
            K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y + + + AI    I+ S   
Sbjct: 189  KEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIV 248

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDN 311
             + RVD +GSRYLLGD  G L +L++  E++      +  L++ELLGETSIA  ++YLDN
Sbjct: 249  CHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDN 308

Query: 312  AVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCS 371
             VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCS
Sbjct: 309  GVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCS 368

Query: 372  GAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            GA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N
Sbjct: 369  GAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDAHRETDNMLVLSFVGQTRVLMLN 428

Query: 432  LEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
             E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G ++
Sbjct: 429  GE-EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNI 487

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAA 551
            +VA+ N+SQV++A G   L YLEI    L ++   ++E+E++CLDI P+G+    S + A
Sbjct: 488  SVASCNSSQVVVAVGRA-LYYLEIRPQELRQISCTEMEHEVACLDITPLGDTNGMSPLCA 546

Query: 552  VGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLN 611
            +G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F L+
Sbjct: 547  IGLWTDISARILRLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLS 606

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
            ++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+
Sbjct: 607  LETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVN 666

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 731
            +MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S
Sbjct: 667  YMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLS 726

Query: 732  LK---------------------------------------NQSCAEESEMHFVRLLDDQ 752
             +                                         S  EE E+H + ++D  
Sbjct: 727  SRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQH 786

Query: 753  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK 812
            TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGK
Sbjct: 787  TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGK 846

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            LQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY
Sbjct: 847  LQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALY 902

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            ++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FN
Sbjct: 903  LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFN 962

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTV 991
            LF  +K+S   TDEER  L+ VG  HLGEFVN F HGSLVM+ L ++      +V+FGTV
Sbjct: 963  LFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTV 1022

Query: 992  NGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH---------EQW--RSFNNEKKT 1040
            NG+IG++ SL    Y  L  +Q  L KVIK VG + H           W  +SF+ E+KT
Sbjct: 1023 NGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSLYPSLVQLRAWASQSFHTERKT 1082

Query: 1041 VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 1088
              A  F+DGDLIESFLD+SR +M E+   + +          +V++L K VEELTR+H
Sbjct: 1083 EPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1140


>gi|351699158|gb|EHB02077.1| DNA damage-binding protein 1 [Heterocephalus glaber]
          Length = 1144

 Score = 1172 bits (3033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1149 (51%), Positives = 792/1149 (68%), Gaps = 71/1149 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVALKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS+     
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSAPSRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELVGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P G + +VA+ ++SQV++A G   L YL+I    L ++   ++E+E++
Sbjct: 481  QEPKALVSEWKEPQGKNNSVASGSSSQVVVAVGRA-LYYLQIHPRELRQISQTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSSGLSPLCAIGLWTDISARILQLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   D + ++ +    KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDEEREVSSRGLVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR- 1032
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  +  
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSLYPS 1075

Query: 1033 ---SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCK 1079
               SF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K
Sbjct: 1076 RAVSFHTERKTEQATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIK 1135

Query: 1080 RVEELTRLH 1088
             VEELTR+H
Sbjct: 1136 VVEELTRIH 1144


>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
 gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
          Length = 1157

 Score = 1168 bits (3021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1162 (51%), Positives = 796/1162 (68%), Gaps = 86/1162 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NYVVTA KPT V  + VGNFT P +LNL+IAK TR+EIHL+TP+GL+PMLDV +YG +  
Sbjct: 4    NYVVTAQKPTAVNAAVVGNFTGPDDLNLVIAKNTRLEIHLVTPEGLRPMLDVGLYGSVGV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            +ELFRP  E QD LFI T +Y+ C+L +  E+ +++TRA GDV DRIGRP+D GQIGIID
Sbjct: 64   MELFRPPNEPQDLLFILTAKYRVCILGYRKETGDIVTRACGDVQDRIGRPSDTGQIGIID 123

Query: 125  PDCRLIGLHLYDGLFKVIPF--DNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            P CR+IGL LYDGLFKVIP   D+  +LK AFNIRLEEL V+DI+FLYGCA PTIV +YQ
Sbjct: 124  PSCRVIGLRLYDGLFKVIPLELDSDKELK-AFNIRLEELHVVDIQFLYGCANPTIVFIYQ 182

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D    RHVKTYE+ L+D +F +GPW Q+N++  A  +I VP PL G LIIG+E+I Y   
Sbjct: 183  D-PHGRHVKTYEINLRDHEFAKGPWKQDNVEVEACRVIAVPNPLGGALIIGQESITYHKG 241

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTGLKI 294
            + + AI    ++ S    +G++D +GSRYLLGD  G L++L++  ++      +V  LK+
Sbjct: 242  SNYHAIAPPALKQSSLTCHGKIDTNGSRYLLGDMNGRLYMLLLERQELIDGTYEVKDLKL 301

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            E+LGETSIA  + YLDN VV+IGS  GDSQL KL+ +PDA GSYV+V+E + NLGPIVD 
Sbjct: 302  EMLGETSIAHCLVYLDNGVVFIGSMLGDSQLAKLSTEPDADGSYVQVMETFTNLGPIVDM 361

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR-SSTDDPF 413
             VVDLERQGQGQ+VTCSGA K+GSLRI+RNGIGI+E A+++L GI G+W+L+   T   +
Sbjct: 362  VVVDLERQGQGQLVTCSGAKKEGSLRIIRNGIGIHEHATIDLAGIMGIWALKLRKTQQEY 421

Query: 414  DTFLVVSFISETR---------ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
            D  LV+SF+ ++R         +L+++ E E+EETEI GF    QT +  +    QL+QV
Sbjct: 422  DDTLVLSFVGQSRRVLCTIHSRVLSLSGE-EVEETEIPGFSDDQQTYYSGNVTGAQLIQV 480

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVK 524
            T+ SVRLV+  +R+L +EWK P   +++VA+ N  QV+ A G   L Y+EI  G L ++ 
Sbjct: 481  TAASVRLVNCETRQLVSEWKHPSAKNISVASCNTEQVVAAVGS-ELYYIEIMPGELRQIS 539

Query: 525  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS 584
               LEYE++CLDI P  E  S + + AVG+WTDISVR+  LP LN +  + LGGEIIPRS
Sbjct: 540  QVTLEYEVACLDITPTVEGKSRADMVAVGLWTDISVRVLQLPKLNQLHVQMLGGEIIPRS 599

Query: 585  VLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
            +L  AFEGI YLLCALGDG L  F ++  TG L + KKV+LGTQP  LRTF S +T +VF
Sbjct: 600  ILKTAFEGIHYLLCALGDGTLFYFTMDPSTGALAECKKVTLGTQPTMLRTFKSLSTVNVF 659

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
            A SDRPTVIYSSN KL++SNVNLKEV+ MCP NS  +PDSLA+A +G LTIGTID+IQKL
Sbjct: 660  ACSDRPTVIYSSNHKLVFSNVNLKEVNFMCPLNSQGYPDSLALANDGSLTIGTIDEIQKL 719

Query: 705  HIRSIPLGEHPRRICHQEQSRTFAICSLKNQ----------------------------- 735
            HIR++PLGE PRRI +QE ++TF + S++ +                             
Sbjct: 720  HIRTVPLGESPRRIAYQEATQTFGVISVRIEISEPGTSGTVPLHPSASTTAHNVSSSVGT 779

Query: 736  --------------SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 781
                          +  +E E+  + ++D  TFE    + L   E   S++SC+ SDD +
Sbjct: 780  GVSGSASSSAPDGITFGDEMEIGSLLIIDQHTFEVTHAHQLHDNEQATSLMSCTLSDDPH 839

Query: 782  VYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             YYCVGTAYV PEE EP  GR+L+F + +GKL  +AEKE KGAVYSL  FNGK+LA IN 
Sbjct: 840  TYYCVGTAYVFPEEPEPKAGRLLLFHLSEGKLVQVAEKEVKGAVYSLVEFNGKVLAGINS 899

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
             + +++W       +E + EC ++ +ILALY++T+GDFI+VGDLM+S++LL+Y   EG+ 
Sbjct: 900  TVSIFEWT----ADKEFRYECSYYDNILALYLKTKGDFILVGDLMRSMTLLVYLPLEGSF 955

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 961
            +E A D++  WM+A+EILDDD +LGAEN++NLFT  K+S   TDEER  L+  G+YHLGE
Sbjct: 956  QEIAHDFSPKWMTAIEILDDDTFLGAENSYNLFTCTKDSGATTDEERYHLQDAGQYHLGE 1015

Query: 962  FVNRFRHGSLVMRLP-DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            FVN FRHGSLVM  P D+       V+FGTVNG IG++A +  + + FL ++Q  L KVI
Sbjct: 1016 FVNVFRHGSLVMEHPGDASTPFQGCVLFGTVNGRIGIVAQIAQDLFNFLIQVQKKLNKVI 1075

Query: 1021 KGVGGLNHEQW-----RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV--- 1072
            K VG ++H  +      + ++ +K   A  F+DGDLIESFLDL R RM+E+   + +   
Sbjct: 1076 KSVGKIDHSLYPFPHCSNLSHSRKMEPAHGFIDGDLIESFLDLPRARMEEVVTGLQIDDG 1135

Query: 1073 ------SVEELCKRVEELTRLH 1088
                  +V++L K VEELTR+H
Sbjct: 1136 GMKKECTVDDLVKTVEELTRIH 1157


>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
          Length = 1128

 Score = 1155 bits (2987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/1131 (50%), Positives = 795/1131 (70%), Gaps = 48/1131 (4%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRI 62
            ++NYVVTAHK + VTH+ VG+F SP   +LI+ KC+R+EI+ L+ +GL P++++PIYGRI
Sbjct: 1    MYNYVVTAHKASAVTHAAVGSFLSPNNRDLILGKCSRMEIYSLSSEGLVPVIELPIYGRI 60

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            + ++L R   + QD LF  TE+YKF VL+W+ ++ E  T A GDV DRIG PT  G IGI
Sbjct: 61   SVMKLCRFPDDLQDSLFFLTEKYKFAVLRWNTQTGECDTIAGGDVHDRIGHPTSAGHIGI 120

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
             DP     GLHLYDGLFKVIP D K   KEAFNIRLEEL VLDI+FLYG +KPTI VLY 
Sbjct: 121  CDPSMTCFGLHLYDGLFKVIPTDFK---KEAFNIRLEELDVLDIQFLYGHSKPTIAVLYT 177

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D+++ RH+KTY V+LKDKDF  GP  Q NL++GA +LIPVP P+ GV+++G+ET+ Y S 
Sbjct: 178  DSEENRHLKTYTVSLKDKDFGNGPLFQGNLESGASMLIPVPTPIGGVVVLGQETVTYISG 237

Query: 243  NAFK---AIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI---------THEKEKVT 290
            +  +   +IP+  +I +AYGR+D DG+RYLLGD  G+L+LLV+         T  + K+T
Sbjct: 238  SGLRGYHSIPVSATIFRAYGRIDKDGTRYLLGDEKGILYLLVLEQSTSLSTFTETETKIT 297

Query: 291  GLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAK-GSYVEVLERYVNLG 349
            GLKI+ LGETS+ STI YLDN  VYIGS +GDSQLI+L  +P  + GS++EV+E Y NL 
Sbjct: 298  GLKIQTLGETSLPSTIDYLDNGFVYIGSCHGDSQLIRLLSEPHPETGSFLEVMETYPNLS 357

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 409
            PIVDFCV+D ERQGQGQVVTCSGA KDGSLRI+RNGIGI+EQASVE+ G+K ++SL+ S+
Sbjct: 358  PIVDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHEQASVEVPGVKELFSLKRSS 417

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
                 + L++SF SE+R+L +   + + E     F  Q  TL+C + + + +VQ+T    
Sbjct: 418  LSSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQITPSKA 477

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI--LTEVKHAQ 527
            RL+S     + NEW  P G+ ++VA+ N+ Q+++AT GG+L+Y +I      + E  +  
Sbjct: 478  RLISCEDMSIVNEWHPPSGFRISVASGNSMQLIIATTGGNLIYFDIDANPKRIMEKSYKS 537

Query: 528  LEYEISCLDINPIGE-------NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
            LEYEI  LDI+P+G+           S   AVGMWT++S+R +SLP L+LI  E LG ++
Sbjct: 538  LEYEICSLDISPLGQAGMNLASQAIPSSFVAVGMWTEVSIRFYSLPSLDLIHTEKLGLDV 597

Query: 581  IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE-------LTDRKKVSLGTQPITLR 633
            I RS+L    +G  Y L ALGDG LL + L+    +       L D++++S+GTQP +L 
Sbjct: 598  IARSLLFVTMDGEDYFLAALGDGRLLTYRLDKSAKDTDSEKKFLYDQRQMSIGTQPASLS 657

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNK--KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
             F ++N  HVFAA DRPTVI+SS+   KLL SNVNL+EV+ +C F+S AFPD LA+  EG
Sbjct: 658  IFETQNALHVFAACDRPTVIHSSSGGGKLLCSNVNLREVTRVCSFSSEAFPDCLALVTEG 717

Query: 692  ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------NQSCAEESE 742
             L +GT+D+IQKLHIR+IPLGE PRRI H +    FA+ + K         N++ +E +E
Sbjct: 718  SLLLGTVDNIQKLHIRTIPLGEQPRRIAHLDTHHVFAVLTTKQVVTISEDGNEALSETTE 777

Query: 743  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENE 797
              +VRL+DD   E + +Y L+ FE  CS+++ +F DD+       Y+ VGTAY   +E E
Sbjct: 778  EGYVRLIDDTMMEIVHSYKLEQFETPCSVITVNFGDDAAAKDNQDYFVVGTAYSYADEPE 837

Query: 798  PTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRE 857
            P++GR+LVF V + +L L+AE+  KGA+YS++AFNGK+LA++N  ++L +W   + G R 
Sbjct: 838  PSRGRMLVFAVREQRLTLVAERTFKGALYSMDAFNGKILASVNSMLKLVRWSETESGART 897

Query: 858  LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
            L  EC +HG I  L ++  GDFI++GDL++S+SLL YK   G IE+ ARD + +W++ +E
Sbjct: 898  LTEECTYHGSIFILQIKCLGDFILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSWITVIE 957

Query: 918  ILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
            +LD D Y+ AEN FNLFT+++NS+ +T+EER RLE VGEYHLGE VNR RHG LV+++P+
Sbjct: 958  MLDLDYYISAENCFNLFTLKRNSDASTEEERSRLEKVGEYHLGELVNRIRHGRLVLQIPE 1017

Query: 978  SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 1037
            S +  + ++++GT NG +GVIAS+  + + FL  LQT L +VIKGVGG+ HE WR F +E
Sbjct: 1018 SGISILKSLLYGTANGALGVIASIDEKTFQFLHSLQTALNEVIKGVGGIQHEDWRRFTSE 1077

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            ++  D+KNFLDGDLIE FLDLSR +M+ ++K +NV VEEL K+VEELTR+H
Sbjct: 1078 RRIGDSKNFLDGDLIERFLDLSRDKMELVAKKVNVPVEELAKQVEELTRIH 1128


>gi|410045300|ref|XP_508472.4| PREDICTED: DNA damage-binding protein 1 [Pan troglodytes]
          Length = 1107

 Score = 1147 bits (2968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/1126 (51%), Positives = 765/1126 (67%), Gaps = 105/1126 (9%)

Query: 22   GNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIA 81
            G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA +ELFRP GE++D LFI 
Sbjct: 28   GHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFIL 87

Query: 82   TERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLF 139
            T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IGIIDP+CR+IGL LYDGLF
Sbjct: 88   TAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLF 147

Query: 140  KVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKD 199
            KVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +YQD +  RHVKTYEV+L++
Sbjct: 148  KVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQ-GRHVKTYEVSLRE 206

Query: 200  KDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITK 256
            K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y + + + AI    I+ S   
Sbjct: 207  KEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIV 266

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDN 311
             + RVD +GSRYLLGD  G L +L++  E++      +  L++ELLGETSIA  ++YLDN
Sbjct: 267  CHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDN 326

Query: 312  AVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCS 371
             VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCS
Sbjct: 327  GVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCS 386

Query: 372  GAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            GA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N
Sbjct: 387  GAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLN 446

Query: 432  LEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
             E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   ++
Sbjct: 447  GE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNI 505

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAA 551
            +VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A
Sbjct: 506  SVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCA 564

Query: 552  VGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLN 611
            +G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN
Sbjct: 565  IGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 624

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
            ++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+
Sbjct: 625  IETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVN 684

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 731
            +MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S
Sbjct: 685  YMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLS 744

Query: 732  LK---------------------------------------NQSCAEESEMHFVRLLDDQ 752
             +                                         S  EE E+H + ++D  
Sbjct: 745  SRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQH 804

Query: 753  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK 812
            TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGK
Sbjct: 805  TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK 864

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            LQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY
Sbjct: 865  LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALY 920

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            ++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FN
Sbjct: 921  LKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFN 980

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
            LF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM                   
Sbjct: 981  LFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVM------------------- 1021

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
                                Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLI
Sbjct: 1022 --------------------QNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLI 1061

Query: 1053 ESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 1088
            ESFLD+SR +M E+   +            + ++L K VEELTR+H
Sbjct: 1062 ESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1107


>gi|298711490|emb|CBJ26578.1| n/a [Ectocarpus siliculosus]
          Length = 1135

 Score = 1147 bits (2968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/1113 (52%), Positives = 771/1113 (69%), Gaps = 47/1113 (4%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV TA K T V+ S V +FT P +LNL+IAK   +EI  +T +GLQ  LDVP+YG IAT+
Sbjct: 5    YVATAKKATAVSKSLVCHFTGPDDLNLVIAKGAHLEIRAITAEGLQHRLDVPLYGAIATM 64

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
            E +R   E  + +F+ TERY+FCVLQ+D    E+ TR+ G V DRIGR  DN +IG++DP
Sbjct: 65   EAYRLADENCERIFVLTERYQFCVLQYDVSRQEIRTRSSGSVKDRIGRAIDNSKIGVMDP 124

Query: 126  DCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNK 185
              R+IGLHLY+G FKVIP D KGQLK+AFNIRLEEL+VLDI+FL GC K TI VLYQD +
Sbjct: 125  QSRMIGLHLYEGYFKVIPMDAKGQLKDAFNIRLEELEVLDIQFLSGCPKATIAVLYQDQR 184

Query: 186  DARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAF 245
            +ARH+KTY ++ +DK+F  GPW+Q N+++ A  LIPVP P  GVLI+G +TI Y S  AF
Sbjct: 185  NARHIKTYTISTRDKEFDTGPWAQLNVEHNASELIPVPAPFGGVLILGHQTICYHSGKAF 244

Query: 246  KAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHE--KEKVTGLKIELLGETSIA 303
              IPI+ +   AYG VDADGSR L+ DH+G LH++++T +     V    IE LGETS A
Sbjct: 245  ITIPIQNTRMCAYGWVDADGSRLLVSDHSGGLHVVILTPDATNTAVETAHIEALGETSCA 304

Query: 304  STISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG 363
            S+ISYLDN VV+IGS+ GDSQLIKLN + DA+G+Y++VLE Y NLGPI+D CV DL+RQG
Sbjct: 305  SSISYLDNGVVFIGSASGDSQLIKLNPEKDAQGTYIQVLETYDNLGPILDMCVADLDRQG 364

Query: 364  QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFIS 423
            QGQ VTCSG  KDGSLRI+RNGIGINE A++EL GIKGMWSLR S  +  D +LV +FIS
Sbjct: 365  QGQAVTCSGCSKDGSLRIIRNGIGINEHAAIELAGIKGMWSLRPSNTN-HDKYLVQAFIS 423

Query: 424  ETRILAMNLEDE-----LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            ETR+LA   EDE     L E EI GF  +  TLFC     N  VQVT   V L+     +
Sbjct: 424  ETRVLAFE-EDEDGDHQLAEGEIAGF-QEGCTLFCGCVGGNMAVQVTKRGVVLICCDGLQ 481

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA--QLEYEISCLD 536
              + W  P   ++ VA+ NA++V+LA GGG+LV+LE+       V+ A  QL+ EI+C+ 
Sbjct: 482  EIDRWDPPTDLNITVASGNATRVVLALGGGNLVHLEVDATAKKLVQKARVQLDNEIACIS 541

Query: 537  INPIGENP-----------------SYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
            +NP    P                     + AVGMWTD++VR+ SLPDL  ++ + LGG+
Sbjct: 542  LNPPSNQPVSNAEPATTAMECDEESKLDSLVAVGMWTDMTVRLLSLPDLQGVSSQPLGGD 601

Query: 580  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM---KTGELTDRKKVSLGTQPITLRTFS 636
               RSV+L     + YL   LGDGH+++F L +    T  L   KKV+LGTQP+ L  F 
Sbjct: 602  TQARSVILATIADVHYLFVGLGDGHVVSFPLEVTAESTLALGTPKKVALGTQPVGLACFR 661

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
            +     VF ASDRP VIY S  KLLY+NVN+ EV+ +C F+S+  P  LA+A E  LTIG
Sbjct: 662  NNGMVCVFVASDRPAVIYCSGGKLLYANVNMGEVNSVCSFDSSELPHCLALASENSLTIG 721

Query: 697  TIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA---EESEMHFVRLLDDQT 753
            TIDDIQKLHI+ + LGE P+RI H +  R F I +   ++     EE E +FV+ LDD  
Sbjct: 722  TIDDIQKLHIQKVSLGEAPQRITHHDSGRMFGIITTSYRAVENSDEEEEHNFVKFLDDTN 781

Query: 754  FEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE---- 809
            FE +  +PLD FE G S++SC F++D   Y  VGT YV  +E EP  GR+LVF VE    
Sbjct: 782  FEELYCHPLDAFENGSSMVSCVFANDKKEYLVVGTGYVREDECEPAVGRLLVFSVEGQGA 841

Query: 810  DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHIL 869
            + K+ L AE ET+GAVY LN FNGKLLA IN K+QL++W+ +DDG +ELQ+ECG+HGHIL
Sbjct: 842  ERKVDLAAEVETRGAVYVLNGFNGKLLACINSKVQLFRWIEKDDGIQELQTECGYHGHIL 901

Query: 870  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
            AL++Q+RGDFI+VGDLM+S+SLL+YK  +GAIEE ARDY+ANWM+AVE+L+DD+Y+G E 
Sbjct: 902  ALHMQSRGDFIIVGDLMRSVSLLVYKAVDGAIEEVARDYHANWMTAVEMLNDDVYIGGEA 961

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP--------DSDVG 981
            + N+FT+R+N++ AT+EER RLE+ GE+HLGEFVN+F  GSL+M+          DS + 
Sbjct: 962  DCNIFTLRRNADAATEEERARLEIQGEFHLGEFVNKFCRGSLLMQSSEVNSPGGMDSPLV 1021

Query: 982  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
            +   ++FGTVNG++G I +L  + + FL +LQT + KV+KGVGG +H++WRSF N ++T 
Sbjct: 1022 KGQPLLFGTVNGMVGTILTLTEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTS 1081

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSV 1074
             + NF+DGDL+ES+LD+ R   +E+ + ++  V
Sbjct: 1082 PSSNFIDGDLVESYLDMPRHNQEEVLRHVDTPV 1114


>gi|221040048|dbj|BAH11787.1| unnamed protein product [Homo sapiens]
          Length = 1092

 Score = 1146 bits (2964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1075 (53%), Positives = 755/1075 (70%), Gaps = 57/1075 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD  GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPHGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEH 1070


>gi|297267724|ref|XP_001082958.2| PREDICTED: DNA damage-binding protein 1 [Macaca mulatta]
          Length = 1092

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1075 (53%), Positives = 756/1075 (70%), Gaps = 57/1075 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEH 1070


>gi|119594339|gb|EAW73933.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_a [Homo
            sapiens]
          Length = 1094

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1075 (53%), Positives = 756/1075 (70%), Gaps = 57/1075 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3    YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63   VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123  IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183  QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242  ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
             + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242  GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302  VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362  MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422  DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481  QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540  CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600  HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660  YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------N 734
             PR+IC+QE S+ F + S +                                        
Sbjct: 720  SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780  TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840  EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
             +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897  -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+
Sbjct: 956  AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ 1015

Query: 975  -LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
             L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H
Sbjct: 1016 NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEH 1070


>gi|242010743|ref|XP_002426118.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
 gi|212510165|gb|EEB13380.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
          Length = 1148

 Score = 1142 bits (2955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/1156 (49%), Positives = 789/1156 (68%), Gaps = 83/1156 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT VT    GNFTSP +LNLI+AK TR+EIHL+TP+GL+P+ ++ +Y RI+ 
Sbjct: 4    HYVVTAQKPTAVTACVTGNFTSPSDLNLILAKNTRLEIHLVTPEGLRPLKEIGLYDRISV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LFI T RY   +L+   D E+ E+ T+A G+V+DRIG+ ++ G I +
Sbjct: 64   VKFFRPPHEHKDLLFIVTTRYNAMILECIGDGENIEIKTKAHGNVADRIGKQSETGIIAV 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP+ R+IGL LYDGL K+IP        +A +IR+EE++V D+ FL+GC  PTI++++Q
Sbjct: 124  IDPEARVIGLRLYDGLLKIIPLGKDNSELKASSIRMEEVEVQDLNFLHGCQNPTIILIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP PLCG +IIG+E+I+Y + 
Sbjct: 184  D-INGRHVKTHEISLRDKEFVKMPWKQDNVEPDASIVIPVPEPLCGAIIIGQESILYHNG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-------KVTGL 292
              + A+    I  S    Y +VD++GSRYLLGD AG L +L++  E++       K  GL
Sbjct: 243  AGYVAVAPPVINQSTITCYTQVDSNGSRYLLGDMAGHLFMLLLETEEKIDGTPCVKENGL 302

Query: 293  KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIV 352
            K+ELLGE SI   I+YLDN V++IGS  GDSQL+KLN  PD  G YV ++E + NL PI+
Sbjct: 303  KVELLGEISIPEAITYLDNGVLFIGSRCGDSQLVKLNTSPDENGYYVTIMEAFTNLAPIL 362

Query: 353  DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP 412
            D  VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E A+++L GIKGMW+LR+S D  
Sbjct: 363  DMVVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQEHATIDLLGIKGMWALRASLDSV 422

Query: 413  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
            +D  +V++F+ +TRIL +N E E+EETEI GF S  Q+ +C +   N ++Q+T    RL+
Sbjct: 423  YDNTIVLAFVGQTRILTLNGE-EVEETEIPGFLSDQQSFYCGNVENNNMIQLTPTCARLI 481

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 532
            S  +++L +EW+ P G +++V   N  Q + A  G  L YLEI    L +  +  LEYE+
Sbjct: 482  SVETKQLVSEWRPPAGKTISVVACNTVQAICA-AGSDLYYLEILKNELVQKGNTTLEYEV 540

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            +CLDI P+ E    + I AVG+WTDIS RI  LPDL  + +E+LGGEIIPRS+L+  FE 
Sbjct: 541  ACLDITPLSEGGKTADIIAVGLWTDISARILKLPDLEELNREYLGGEIIPRSILMTCFEN 600

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
            I+YLLCALGDG +  F LN + G L+D+KKV+LGTQP  LRTF S +TT+VFA SDRPTV
Sbjct: 601  INYLLCALGDGSMFYFSLNNQNGILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV 660

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            IYSSN KL++SNVNLKEV+HMC  NS A+PDSLA+A +  +TIGTID+IQKLHIR++PLG
Sbjct: 661  IYSSNHKLVFSNVNLKEVNHMCSLNSEAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLG 720

Query: 713  EHPRRICHQEQSRTFAICSLK------------NQSCA---------------------- 738
            E PRRI +QE ++TF + +++             QS +                      
Sbjct: 721  ESPRRIAYQETTQTFGVITMRMDVHQRSGLIPVKQSASTQAQSISSSSNIGGAHNLKSGP 780

Query: 739  -----------EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG 787
                       +E E+H + ++D  TFE +  +     EY  S++S    DD N YY VG
Sbjct: 781  AASINSFAEFGQEVEVHNLLVIDQHTFEVLHAHQFMQSEYALSLISTKLGDDPNTYYIVG 840

Query: 788  TAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 847
            TA V P+E+E  +GRIL+F  ++GKL  +AEKE KGA YSL  FNGKLLA+IN  ++L++
Sbjct: 841  TAMVNPDESESKQGRILIFQFQEGKLYQVAEKEIKGAAYSLVEFNGKLLASINSTVRLFE 900

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
            W       +EL+ EC H  +I++LY++T+GDFI+VGDL++S++LL YK  EG  EE ARD
Sbjct: 901  WT----AEQELRLECSHFNNIISLYLKTKGDFILVGDLIRSMTLLQYKTMEGCFEEMARD 956

Query: 908  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
            +N NWM+AVEI+DDD +LGAEN+FNLF  +K+S  ATDEER ++  VG +HLG+ VN FR
Sbjct: 957  HNPNWMTAVEIIDDDTFLGAENSFNLFVCQKDSAAATDEERQQMHAVGMFHLGDMVNVFR 1016

Query: 968  HGSLVMRLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 1022
            HGSLVM+    +VG+  T     ++FGTV+G IG++  +    Y FL +L+  L +VIK 
Sbjct: 1017 HGSLVMQ----NVGETSTPTTGCILFGTVSGAIGLVTQISANFYNFLHELECKLTEVIKS 1072

Query: 1023 VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---------- 1072
            VG + H  WRSF  E KT     F+DGDLIESFLDLS  +M E++  + +          
Sbjct: 1073 VGKIKHSFWRSFTTEIKTEPCDGFIDGDLIESFLDLSHEKMKEVAAGLQIDNGSGMKQEA 1132

Query: 1073 SVEELCKRVEELTRLH 1088
            +V++L K VE+LTR+H
Sbjct: 1133 TVDDLVKMVEDLTRIH 1148


>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
          Length = 1150

 Score = 1141 bits (2951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/1153 (49%), Positives = 795/1153 (68%), Gaps = 70/1153 (6%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRI 62
            ++NYVVTAHK + VTH+ VG+F SP   +LI+ KC+R+EI+ L+ +GL P++++PIYGRI
Sbjct: 1    MYNYVVTAHKASAVTHAAVGSFLSPNNRDLILGKCSRMEIYSLSSEGLVPVIELPIYGRI 60

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            + ++L R   + QD LF  TE+YKF VL+W+ ++ E  T A GDV DRIG PT  G IGI
Sbjct: 61   SVMKLCRFPDDLQDSLFFLTEKYKFAVLRWNTQTGECDTIAGGDVHDRIGHPTSAGHIGI 120

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
             DP     GLHLYDGLFKVIP D K   KEAFNIRLEEL VLDI+FLYG +KPTI VLY 
Sbjct: 121  CDPSMTCFGLHLYDGLFKVIPTDFK---KEAFNIRLEELDVLDIQFLYGHSKPTIAVLYT 177

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D+++ RH+KTY V+LKDKDF  GP  Q NL++GA +LIPVP P+ GV+++G+ET+ Y S 
Sbjct: 178  DSEENRHLKTYTVSLKDKDFGNGPLFQGNLESGASMLIPVPTPIGGVVVLGQETVTYISG 237

Query: 243  NAFK---AIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI---------THEKEKVT 290
            +  +   +IP+  +I +AYGR+D DG+RYLLGD  G+L+LLV+         T  + K+T
Sbjct: 238  SGLRGYHSIPVSATIFRAYGRIDKDGTRYLLGDEKGILYLLVLEQSTSLSTFTETETKIT 297

Query: 291  GLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAK-GSYVEVLERYVNLG 349
            GLKI+ LGETS+ STI YLDN  VYIGS +GDSQLI+L  +P  + GS++EV+E Y NL 
Sbjct: 298  GLKIQTLGETSLPSTIDYLDNGFVYIGSCHGDSQLIRLLSEPHPETGSFLEVMETYPNLS 357

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 409
            PIVDFCV+D ERQGQGQVVTCSGA KDGSLRI+RNGIGI+EQASVE+ G+K ++SL+ S+
Sbjct: 358  PIVDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHEQASVEVPGVKELFSLKRSS 417

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
                 + L++SF SE+R+L +   + + E     F  Q  TL+C + + + +VQ+T    
Sbjct: 418  LSSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQITPSKA 477

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI--LTEVKHAQ 527
            RL+S     + NEW  P G+ ++VA+ N+ Q+++AT GG+L+Y +I      + E  +  
Sbjct: 478  RLISCEDMSIVNEWHPPSGFRISVASGNSMQLIIATTGGNLIYFDIDANPKRIMEKSYKS 537

Query: 528  LEYEISCLDINPIGE-------NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
            LEYEI  LDI+P+G+           S   AVGMWT++S+R +SLP L+LI  E LG ++
Sbjct: 538  LEYEICSLDISPLGQAGMNLASQAIPSSFVAVGMWTEVSIRFYSLPSLDLIHTEKLGLDV 597

Query: 581  IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE-------LTDRKKVSLGTQPITLR 633
            I RS+L    +G  Y L ALGDG LL + L+    +       L D++++S+GTQP +L 
Sbjct: 598  IARSLLFVTMDGEDYFLAALGDGRLLTYRLDKSAKDTDSEKKFLYDQRQMSIGTQPASLS 657

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNK--KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
             F ++N  HVFAA DRPTVI+SS+   KLL SNVNL+EV+ +C F+S AFPD LA+  EG
Sbjct: 658  IFETQNALHVFAACDRPTVIHSSSGGGKLLCSNVNLREVTRVCSFSSEAFPDCLALVTEG 717

Query: 692  ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------NQSCAEESE 742
             L +GT+D+IQKLHIR+IPLGE PRRI H +    FA+ + K         N++ +E +E
Sbjct: 718  SLLLGTVDNIQKLHIRTIPLGEQPRRIAHLDTHHVFAVLTTKQVVTISEDGNEALSETTE 777

Query: 743  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENE 797
              +VRL+DD   E + +Y L+ FE  CS+++ +F DD+       Y+ VGTAY   +E E
Sbjct: 778  EGYVRLIDDTMMEIVHSYKLEQFETPCSVITVNFGDDAAAKDNQDYFVVGTAYSYADEPE 837

Query: 798  PTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRE 857
            P++GR+LVF V + +L L+AE+  KGA+YS++AFNGK+LA++N  ++L +W   + G R 
Sbjct: 838  PSRGRMLVFAVREQRLTLVAERTFKGALYSMDAFNGKILASVNSMLKLVRWSETESGART 897

Query: 858  LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
            L  EC +HG I  L ++  GDFI++GDL++S+SLL YK   G IE+ ARD + +W++ +E
Sbjct: 898  LTEECTYHGSIFILQIKCLGDFILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSWITVIE 957

Query: 918  ILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
            +LD D Y+ AEN FNLFT+++NS+ +T+EER RLE VGEYHLGE VNR RHG LV+++P+
Sbjct: 958  MLDLDYYISAENCFNLFTLKRNSDASTEEERSRLEKVGEYHLGELVNRIRHGRLVLQIPE 1017

Query: 978  SDVGQIPTVIF----------------------GTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            S +  + ++++                      GT NG +GVIAS+  + + FL  LQT 
Sbjct: 1018 SGISILKSLLYGMYICFDDNLKELFMHKYRFNLGTANGALGVIASIDEKTFQFLHSLQTA 1077

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            L +VIKGVGG+ HE WR F +E++  D+KNFLDGDLIE FLDLSR +M+ ++K +NV VE
Sbjct: 1078 LNEVIKGVGGIQHEDWRRFTSERRIGDSKNFLDGDLIERFLDLSRDKMELVAKKVNVPVE 1137

Query: 1076 ELCKRVEELTRLH 1088
            EL K+VEELTR+H
Sbjct: 1138 ELAKQVEELTRIH 1150


>gi|91087281|ref|XP_975549.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
            castaneum]
 gi|270010588|gb|EFA07036.1| hypothetical protein TcasGA2_TC010010 [Tribolium castaneum]
          Length = 1149

 Score = 1137 bits (2940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/1156 (48%), Positives = 798/1156 (69%), Gaps = 80/1156 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            ++YVVTAHKPT VT    GNFTSP +LNLI+AK T++EI+L+TP+GL+P+ +V +YG++A
Sbjct: 3    YHYVVTAHKPTAVTACVTGNFTSPGDLNLIVAKNTKLEIYLVTPEGLRPVKEVALYGKVA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
             ++LFRP  E +D LFI T RY   +L+   DA++ ++IT+A G+V+D+IG+P++ G + 
Sbjct: 63   VMKLFRPQHEKKDLLFIVTMRYNAMILECVNDADNLDIITKAHGNVADKIGKPSETGILA 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            +IDP  R+IGL LYDGLFK+IP +      +A NIR++ELQV D++FL+GCA PT+++++
Sbjct: 123  VIDPKARVIGLRLYDGLFKIIPLEKDNSELKASNIRIDELQVHDVEFLHGCANPTLILIH 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
            QD  + RHVKT+E++L++K+FV+ PW Q+N++  A ++IPVP PL G +IIG+E I+Y  
Sbjct: 183  QD-VNGRHVKTHEISLREKEFVKVPWRQDNVETEASMIIPVPSPLGGAIIIGQENILY-- 239

Query: 242  ANAFKAIPIRPSITK-----AYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTG 291
             +    + + P++ K      Y +VD  G RYLLGD AG L +L +  +      + V  
Sbjct: 240  HDGITPVVVAPAVIKQSTIVCYAKVDPGGLRYLLGDMAGHLFMLFLEVDNRGDGNDVVKD 299

Query: 292  LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
            LK+ELLGE +    I+YLDN V++IGS  GDSQL+KL  +P+  GSYV V+E + NL PI
Sbjct: 300  LKVELLGEIATPECITYLDNGVLFIGSRLGDSQLVKLTTKPNESGSYVTVMESFTNLAPI 359

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD 411
            +D CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+ ++D 
Sbjct: 360  LDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALQVASDG 419

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             +D  LV++F+ +TR+L++N E E+EET+I GF S  QT FC + I+ Q+VQ+T  S RL
Sbjct: 420  RYDNTLVLAFVGQTRVLSLNGE-EVEETDIAGFASDQQTFFCGNVIHEQIVQITPISARL 478

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            +S+ ++ L  EWK P   ++ V   N  Q++++TG   L Y+EI    L       L+ E
Sbjct: 479  ISAQNKTLLAEWKPPSDKNIAVVACNTCQIVVSTGS-ILYYIEIHQNELIMKGVTTLDVE 537

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            ++CLDI+P+G+  + S+  AVG+WTDI+ RI  +PDL+  TKE+LGGEIIPRSVL+  FE
Sbjct: 538  VACLDISPLGDGVTTSEYIAVGLWTDITARILRIPDLSEATKEYLGGEIIPRSVLMTCFE 597

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
            G SYLLCALGDG +  F+ +  TG L+D+K+V+LGTQP  LRTF S +TT+VFA SDRPT
Sbjct: 598  GHSYLLCALGDGSMFYFVFHKDTGTLSDKKRVTLGTQPTVLRTFRSLSTTNVFACSDRPT 657

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            VIYSSN KL++SNVN+KEV+HMC  N+ A+PDSLA+A +  +TIGTID+IQKLHIR++PL
Sbjct: 658  VIYSSNHKLVFSNVNMKEVNHMCSLNAEAYPDSLALATDSSVTIGTIDEIQKLHIRTVPL 717

Query: 712  GEHPRRICHQEQSRTFAICSLKNQ------------------------------------ 735
             E P+RI +QE+S+TF + + +                                      
Sbjct: 718  QESPKRIAYQEESQTFGVLTARIDIQDSTGLNPARPSASTMAQSTTSSSSVGSLSMSKSG 777

Query: 736  -----------SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS-FSDDSNVY 783
                          +E E+H + ++D  TFE +  + L   EY  SI+S +    D N Y
Sbjct: 778  SSSLIGGNIIPDYGQEVEVHNLLIIDQHTFEVLHAHQLMQQEYAMSIISTNRLGGDMNEY 837

Query: 784  YCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            Y VGTA V PEE+EP +GRIL+F   D KL  ++EKE KGA YSL  FNGKLLA+IN  +
Sbjct: 838  YIVGTATVNPEESEPKQGRILIFQWNDNKLTQVSEKEIKGACYSLAEFNGKLLASINSTV 897

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
            +L++W +     +EL+ EC H  +IL L+++T+GDFI++GDLM+S++LL YK  EG+ EE
Sbjct: 898  RLFEWTVE----KELRLECSHFNNILTLFLKTKGDFILLGDLMRSMTLLQYKTMEGSFEE 953

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFV 963
             ARDYN NWM+AVEILDDDI+LGAEN+FN+F  +K+S   TDEER ++  VG +H+G+ +
Sbjct: 954  IARDYNPNWMTAVEILDDDIFLGAENSFNIFVCQKDSAATTDEERSQMHEVGRFHVGDMI 1013

Query: 964  NRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 1022
            N FRHGSLVM+ L ++       V+FGTV+G IG++  +  + Y FL +LQ  L  VIK 
Sbjct: 1014 NVFRHGSLVMQNLGETSTPTTGCVLFGTVSGAIGLVTQITQDFYDFLLELQNKLSTVIKS 1073

Query: 1023 VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---------- 1072
            VG ++H QWR+FN + KT  ++ F+DGDLIESFLDLS  +M E++  + +          
Sbjct: 1074 VGKIDHSQWRAFNTDIKTEPSEGFIDGDLIESFLDLSHDKMKEVADGLQITGEGGMKQDC 1133

Query: 1073 SVEELCKRVEELTRLH 1088
            +V++L K VE+LTR+H
Sbjct: 1134 TVDDLVKMVEDLTRIH 1149


>gi|308808936|ref|XP_003081778.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
 gi|116060244|emb|CAL56303.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
          Length = 1282

 Score = 1129 bits (2919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1050 (56%), Positives = 746/1050 (71%), Gaps = 83/1050 (7%)

Query: 10   AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELF- 68
            AHKPT VTHS VG FTS +E +LI+AKCTR+EI+ L+  GL+P++DVPIYGR+AT+ L  
Sbjct: 233  AHKPTVVTHSAVGRFTSSEETDLIVAKCTRLEIYRLSSSGLRPIMDVPIYGRVATMSLCG 292

Query: 69   -RPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDC 127
             R  G ++  LFI TERY F  L +D ES EL T A GDV D IGRP +NGQIGI+D DC
Sbjct: 293  GRERG-SKGRLFITTERYGFTALSYDEESEELKTEAFGDVRDNIGRPAENGQIGIVDEDC 351

Query: 128  RLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDA 187
            R IGL LYDGLFKVIP D KG++KEAFNIRLEEL+V DI+FL+G AKPTI VLY+D K+A
Sbjct: 352  RSIGLQLYDGLFKVIPCDEKGKVKEAFNIRLEELRVEDIQFLHGTAKPTIAVLYRDMKEA 411

Query: 188  RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA--- 244
             H+KTYE+ +++K+FV  PW+QN+L+ G+  +IPVP P+ GV+++GEETIVY +  +   
Sbjct: 412  VHIKTYEIGVREKEFVSSPWAQNDLEGGSSKIIPVPAPVGGVVVLGEETIVYLNKTSDDT 471

Query: 245  ---FKAI--PIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
                KAI  P R SI   YG +D DGSRYLLGDH G L+LLV+ H+ ++V  LKIE LGE
Sbjct: 472  DVFLKAINIPERSSIV-CYGAIDPDGSRYLLGDHDGTLYLLVLVHDGKRVNELKIERLGE 530

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKL-----NLQPDAKGSYVEVLERYVNLGPIVDF 354
            TSI ST+SYLDN VV++GS+YGDSQLIKL     N+  D   SY+++LE + NLGPIVDF
Sbjct: 531  TSIPSTVSYLDNGVVFVGSAYGDSQLIKLHSEKTNVDKDGNLSYIQILEEFTNLGPIVDF 590

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
              VDLER GQGQVVTCSGAYKDGSLR+VRNGIGI+EQA ++L G+KG++SLR   +   D
Sbjct: 591  AFVDLERHGQGQVVTCSGAYKDGSLRVVRNGIGIDEQAVIQLPGVKGLFSLRDDDESQVD 650

Query: 415  TFLVVSFISETRILAM--NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
             +LVV+FI+ETRIL    +  D L+ETEI GF ++ QTL C + + +             
Sbjct: 651  KYLVVTFINETRILGFVGDEGDTLDETEISGFNAEAQTLCCGNMLES------------- 697

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 532
                                              GG L  L    G L  V  A  E EI
Sbjct: 698  ----------------------------------GGKLHCLSAMKGKLALVASATFEDEI 723

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            +CLD  P+GE  S S + AVG+W+ + + + S+ DL++I +E  G +IIPRS LLC+FE 
Sbjct: 724  ACLDCTPMGEATS-SPVCAVGLWS-MEIVLASMSDLSVIKRESTGEDIIPRSTLLCSFES 781

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS--KNTTHVFAASDRP 650
            I YLL  LGDG L+ +LL+ K+GEL+ RKK+SLGT+PITL+TF S   N   VFAASDRP
Sbjct: 782  IPYLLVGLGDGQLITYLLDEKSGELSVRKKLSLGTKPITLQTFKSHATNVHSVFAASDRP 841

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
            TVI+S+NKKL+YSNVN++EV H+CPF+SAAFPD+LA+A E +LTIG IDDIQKLHIR+IP
Sbjct: 842  TVIFSNNKKLIYSNVNVQEVLHVCPFSSAAFPDALALAGEEDLTIGGIDDIQKLHIRTIP 901

Query: 711  LGEHPRRICHQEQSRTFAIC-----SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 765
            LG  PRRI HQ ++ TFA+      S  +Q C       FVRL+DD +FE +S + L+  
Sbjct: 902  LGGQPRRIAHQPETNTFAVVVEHLWSKSSQDC-------FVRLVDDGSFETLSQFQLEDQ 954

Query: 766  EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 825
            E   S+ SC+F+ DS  YY VGT   L  E+EP++GRILVF V+D +L L++EKE +GAV
Sbjct: 955  ELTSSLTSCTFAGDSTTYYVVGTGIALETEDEPSRGRILVFKVDDDQLVLVSEKEVRGAV 1014

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 885
            Y+LNAF GKLLA IN K++L+KW  R+D   EL SEC HHG I+   V+TRGD+I+VGDL
Sbjct: 1015 YNLNAFKGKLLAGINSKLELFKWTPREDEVHELVSECSHHGQIVTFAVKTRGDWILVGDL 1074

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD-IYLGAENNFNLFTVRKNSEGAT 944
            MKS+SLL+YK EEGAI+E ARD+NANWM+AV +LDDD  YLGAEN+ NLFTV +N    T
Sbjct: 1075 MKSMSLLLYKPEEGAIDEVARDFNANWMTAVAMLDDDETYLGAENSLNLFTVSRNVNAVT 1134

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
            DEER RLE+ GEYHLGE VN F  GSLVM L D +   +PT++FGT NGVIGV+ASLP +
Sbjct: 1135 DEERSRLEITGEYHLGELVNAFAPGSLVMSLRDGESLSVPTLLFGTANGVIGVLASLPKD 1194

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
             Y F E+LQ ++ K I+GVGGL H  WRSF
Sbjct: 1195 VYEFTERLQASINKHIQGVGGLKHADWRSF 1224


>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
          Length = 1158

 Score = 1129 bits (2919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1164 (50%), Positives = 781/1164 (67%), Gaps = 89/1164 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NYVVTAHK T VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 4    NYVVTAHKQTAVTSCVTGNFTSPNDLNLIVAKNYRLEIYLVTPEGLRPLKEVGIYGKIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++L++   + +D LFI T RY   +L+   + E+ E+ITR  G+V+D+IG+P++ G I I
Sbjct: 64   MKLYKSGNDKKDSLFILTARYNAMILECSGEGENMEIITRTQGNVADKIGKPSETGIIAI 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDPDCR+IGL LYDGL K+IP +      +A+NIR+EEL + DI FLYGCA PT+V+++Q
Sbjct: 124  IDPDCRVIGLRLYDGLLKIIPLEKDSSEIKAYNIRIEELCIQDIAFLYGCANPTVVIIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D    RHVKT E++L+DK+F +  W Q+N++  A +L+PVP P  G LIIG+E+I Y + 
Sbjct: 184  D-AHGRHVKTREISLRDKEFAKTSWKQDNVETEAAMLLPVPEPYGGALIIGQESITYHNG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG------LK 293
              +  I    I+ S    YG+VD +GSRYLLGD AG L +LV+  E EK+ G      +K
Sbjct: 243  QNYVTIAPPIIKQSTVTCYGKVDPNGSRYLLGDLAGHLFMLVLEKE-EKMDGTVTVRDIK 301

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            IELLGE SI   ++YLDN VV+IGS +GDSQL+KLN+ PD   SYV V+E + NL PIVD
Sbjct: 302  IELLGEVSIPECLTYLDNGVVFIGSRFGDSQLVKLNVTPDDNNSYVTVMETFTNLAPIVD 361

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR--SSTDD 411
              +VDL+RQGQGQ+VTCSGAYK+GSLRI+RNGIGI+EQAS++L GIKG+W+L+  SS + 
Sbjct: 362  MTIVDLDRQGQGQLVTCSGAYKEGSLRIIRNGIGIHEQASIDLPGIKGIWALKMGSSGNP 421

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
              D  +V+SF+ +TR+L +N E E+EETEI G  +  QT FC +   + ++Q+T+GSVRL
Sbjct: 422  SVDDTVVLSFVGQTRVLMLNGE-EMEETEIPGLTADQQTFFCGNVGKDSVLQITTGSVRL 480

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVK-HAQLEY 530
            +S  +++  +EW  P G  +NV   N  QVL A  G  L YLE+ D     +K H  L+Y
Sbjct: 481  ISVNTKQKLSEWTPPDGKMLNVVACNHGQVLCA-AGRELYYLEMEDDTQVVLKTHVTLDY 539

Query: 531  EISCLDINPIG------ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS 584
            E++CLD+ PI          S +++ AVG+WTDIS R+  LP L    KE LGGEIIPRS
Sbjct: 540  EVACLDLTPISIGSQQNTTVSKAEVCAVGLWTDISARLLKLPTLEEFHKEPLGGEIIPRS 599

Query: 585  VLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
            +L+  FEG  YLL ALGDG L  F +N  T  L DRKKV+LGTQP  LR F S++T +VF
Sbjct: 600  ILMALFEGTPYLLVALGDGSLFYFSMNPVTKLLGDRKKVTLGTQPTVLRPFRSQSTVNVF 659

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
            A SDRPTVIYSSN KL++SNVNLKEV+HMCP NS A+PDSL +A +  +TIGTID+IQKL
Sbjct: 660  ACSDRPTVIYSSNHKLVFSNVNLKEVAHMCPLNSEAYPDSLVLATDTAVTIGTIDEIQKL 719

Query: 705  HIRSIPLGEHPRRICHQEQSRTFAICSLK------------------------------- 733
            HIR++PLGE PRRI +QE ++TF + + +                               
Sbjct: 720  HIRTVPLGESPRRIAYQENTQTFGVITSRVDIVESSGLTPARQSASTQAQSVSSSSSLGS 779

Query: 734  --------NQSC--------AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
                      SC         +E E++ + ++D  +F  +  +     EY  SI+S    
Sbjct: 780  AIKAPVSTRDSCGSGGGAEIGQEIEVYNLLIVDQHSFAVLHAHQFMQNEYALSIVSTRLG 839

Query: 778  DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 837
            DD N YY VGTA V+PEE+EP +GRI++F   DGKL  +AEKE KGA YSL  FN K+LA
Sbjct: 840  DDVNPYYVVGTALVVPEESEPKQGRIVLFQWADGKLTTVAEKEVKGACYSLVDFNSKILA 899

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            AIN  ++LY+W       +EL+ EC +  HI+ALY++ +GDFI+VGDLM+SI+LL YK  
Sbjct: 900  AINNVVRLYEWT----AEKELRLECSNFNHIIALYLKRKGDFILVGDLMRSITLLQYKTM 955

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 957
            EG+ EE ARD N NWMSAVEILDDD +LGAEN+FNLF  +K+S   T+EER +L  VG +
Sbjct: 956  EGSFEEMARDSNPNWMSAVEILDDDTFLGAENSFNLFVCQKDSAATTEEERQQLTEVGRF 1015

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            HLG+ VN FRHGSLVM    ++    PT   V+FGTV+G IGV+  LP E Y FL ++QT
Sbjct: 1016 HLGDMVNVFRHGSLVMDHA-AETLTTPTQGCVLFGTVHGAIGVVTQLPSEFYHFLSEVQT 1074

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV-- 1072
             + +VIK VG + H  WRSF  E+K    + F+DGDLIESFLDLS  +M E++  + +  
Sbjct: 1075 RMARVIKPVGKIEHSFWRSFATERKVEPCEGFIDGDLIESFLDLSSDKMKEVATGLQMDD 1134

Query: 1073 --------SVEELCKRVEELTRLH 1088
                    +VE++ K +E+LTR+H
Sbjct: 1135 GSGMKREATVEDIIKLIEDLTRIH 1158


>gi|326919947|ref|XP_003206238.1| PREDICTED: DNA damage-binding protein 1-like [Meleagris gallopavo]
          Length = 1079

 Score = 1124 bits (2908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/1081 (52%), Positives = 750/1081 (69%), Gaps = 69/1081 (6%)

Query: 70   PH--GEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
            PH  GE++D LFI T +Y  C+L++  + ++ ++ITRA G+V DRIGRP++ G IGIIDP
Sbjct: 6    PHTRGESKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGIIGIIDP 65

Query: 126  DCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNK 185
            +CR+IGL LYDGLFKVIP D + +  +AFNIRLEELQV+D+KFLYGC  PTI  +YQD +
Sbjct: 66   ECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQ 125

Query: 186  DARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAF 245
              RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y + + +
Sbjct: 126  -GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKY 184

Query: 246  KAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELL 297
             AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L++ELL
Sbjct: 185  LAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELL 244

Query: 298  GETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVV 357
            GETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD CVV
Sbjct: 245  GETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVV 304

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFL 417
            DLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS +    D  L
Sbjct: 305  DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHHEMDNML 364

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            V+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   +
Sbjct: 365  VLSFVGQTRVLMLNGE-EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 423

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI 537
             L +EWK P G +++VA+ N++QV++A G   L YLEI    L ++   ++E+E++CLDI
Sbjct: 424  ALVSEWKEPNGKNISVASCNSNQVVVAVGRA-LYYLEIRPQELRQINCTEMEHEVACLDI 482

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLL 597
             P+G+    S + A+G+WTDIS RI  LP   ++ KE LGGEIIPRS+L+  FE   YLL
Sbjct: 483  TPLGDTNGMSPLCAIGLWTDISARILKLPSFEMLHKEMLGGEIIPRSILMTTFESSHYLL 542

Query: 598  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSN 657
            CALGDG L  F L+++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN
Sbjct: 543  CALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN 602

Query: 658  KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRR 717
             KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+
Sbjct: 603  HKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRK 662

Query: 718  ICHQEQSRTFAICSLK---------------------------------------NQSCA 738
            IC+QE S+ F + S +                                         S  
Sbjct: 663  ICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHETSFG 722

Query: 739  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 798
            EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP
Sbjct: 723  EEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEP 782

Query: 799  TKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 858
             +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL
Sbjct: 783  KQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----AEKEL 838

Query: 859  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
            ++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEI
Sbjct: 839  RTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEI 898

Query: 919  LDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPD 977
            LDDD +LGAEN FNLF  +K+S   TDEER  L+ VG  HLGEFVN F HGSLVM+ L +
Sbjct: 899  LDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGE 958

Query: 978  SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 1037
            +      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF+ E
Sbjct: 959  TSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTE 1018

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRL 1087
            +KT  A  F+DGDLIESFLD+SR +M E+   + +          +V++L K VEELTR+
Sbjct: 1019 RKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRI 1078

Query: 1088 H 1088
            H
Sbjct: 1079 H 1079


>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
          Length = 674

 Score = 1117 bits (2890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/673 (80%), Positives = 605/673 (89%)

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
            +LVVSFISETR LAMN+EDELEETEIEGF +QTQTLFC +AI + L+QVT+ SVRLVS T
Sbjct: 2    YLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCT 61

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCL 535
            SREL ++W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKHAQLE+EISCL
Sbjct: 62   SRELVDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCL 121

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY 595
            D+NPIGE+  YS +AAVGMWTDISVRIFSLPDL LI KE+LGGEI+PRSVLLC  EG+SY
Sbjct: 122  DLNPIGEHLEYSSLAAVGMWTDISVRIFSLPDLVLIRKENLGGEIVPRSVLLCTLEGVSY 181

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            LLCALGDG+L +FLLN  TGELTDRKKV+LGTQPI+LRTFSSK TTHVFA+SDRPTVIYS
Sbjct: 182  LLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYS 241

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 715
            SNKKLLYSNVNLKEV+HMCPFN+AAFPDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  
Sbjct: 242  SNKKLLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQA 301

Query: 716  RRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
            RRICHQEQS+T A CS K     EESE H +RLLD QTFE +  YPLD +E GCSI+SCS
Sbjct: 302  RRICHQEQSKTLAFCSFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCS 361

Query: 776  FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
            F DD+NVYYCVGTAYV+PEENEPTKGRILVF VEDG LQLI EKETKGAVYSLNAFNGKL
Sbjct: 362  FVDDNNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKL 421

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            LAAINQKIQLYKWM R+DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YK
Sbjct: 422  LAAINQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYK 481

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 955
            HEE AIEERARDYNANWM+AVE+LDD++Y+GAEN +NLFTVRKNS+ ATD+ER +LEVVG
Sbjct: 482  HEESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERAKLEVVG 541

Query: 956  EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            EYHLGEFVNRFRHGSLVMRLPDS++G+IPTVIFGT+NGVIG+IASLPH+ Y FLEK Q+ 
Sbjct: 542  EYHLGEFVNRFRHGSLVMRLPDSEIGKIPTVIFGTINGVIGIIASLPHDHYTFLEKFQST 601

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            L K IKGVG ++HEQWRSF+N+KKT +A+NFLDGDLIESFLDLSR++M+ +SK M VSVE
Sbjct: 602  LVKYIKGVGNMSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEVVSKAMGVSVE 661

Query: 1076 ELCKRVEELTRLH 1088
            +L K VEELTRLH
Sbjct: 662  DLSKIVEELTRLH 674


>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
          Length = 1084

 Score = 1115 bits (2885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/1143 (50%), Positives = 766/1143 (67%), Gaps = 119/1143 (10%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTAHKPT VT    GNFTS ++LNLIIAK TR+E++++TP+GL+P+ ++ IYGRIA
Sbjct: 3    YNYVVTAHKPTAVTACVTGNFTSTKDLNLIIAKNTRLEVYVVTPEGLRPIKEIGIYGRIA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQ--WDAESSELITRAMGDVSDRIGRPTDNGQIG 121
             LELFRP GE++D LF+ T RY   +L+   D +  E+ITRA G+V DRIGRP++ G IG
Sbjct: 63   VLELFRPPGESKDLLFLLTARYNAMILECSQDGDHIEIITRAHGNVQDRIGRPSETGIIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            I+DP CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D++FL+GC+ PTI++  
Sbjct: 123  IVDPLCRIIGLRLYDGLFKVIPLDRDMRELKAFNIRLEELNVIDVQFLHGCSTPTIILSI 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
              +K                               D  + V PP     II + TI  C 
Sbjct: 183  TYHK------------------------------GDNYLAVAPP-----IIKQSTITCC- 206

Query: 242  ANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIEL 296
                             G+VDA+G RY+LGD AG L +L++  E+       V  +K+EL
Sbjct: 207  -----------------GKVDANGCRYMLGDMAGRLFMLLLEKEERIDGSMAVKDIKVEL 249

Query: 297  LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCV 356
            LGE++IA  I+YLDN VVY+GS  GDSQL+KLN++ D  GSYV+V+E + NLGP+VD CV
Sbjct: 250  LGESAIAECITYLDNGVVYVGSRLGDSQLVKLNVEADDSGSYVQVMETFTNLGPVVDMCV 309

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF-DT 415
            VDLERQGQGQ+VTCSG YK+GSLRI+RNGIGI+E A+++L GIKGMW LR   D P  D 
Sbjct: 310  VDLERQGQGQLVTCSGGYKEGSLRIIRNGIGIHEHATIDLPGIKGMWPLR--VDSPTQDD 367

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
             +V+SF+ +TR+L ++ E E+EETE+ GF +  QT FC +  ++QL+Q+T+ SVRLV   
Sbjct: 368  MIVLSFVGQTRVLLLSGE-EVEETELGGFEADQQTFFCGNVAHSQLLQITAASVRLVDPR 426

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCL 535
            +++L +EW+ P G +++VA  N  QV+ A     +  L+I  G L       +E+E++C+
Sbjct: 427  TKKLLSEWRPPSGKNLSVAGCNHCQVVCAVSR-EVFCLDIQQGALILQGSTTMEHEVACV 485

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY 595
            DI P+ +    SQ+ AVG+WTDIS RI  LP L  + +E LGGEIIPRS+LL  FEG++Y
Sbjct: 486  DITPLNDESGPSQLCAVGLWTDISARILQLPSLEQLHQEMLGGEIIPRSILLATFEGVNY 545

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            +LCALGDG L  F L   TG L+DRKKV+LGTQP  LRTF S  TT+VFA SDRPTV+YS
Sbjct: 546  VLCALGDGALFYFHLQPSTGVLSDRKKVTLGTQPTVLRTFKSPGTTNVFACSDRPTVVYS 605

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 715
            SN KL++SNVNLKEV++MCP NS  +PDSLA+A +  LTIGTID+IQKLHIR++PLGE P
Sbjct: 606  SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANDCTLTIGTIDEIQKLHIRNVPLGETP 665

Query: 716  RRICHQEQSRTFAICSLKN---------------------------------------QS 736
            RRI +QE S+TF + +L++                                        +
Sbjct: 666  RRIAYQEASQTFGVITLRSDLQDSNGSTPARPSASTQALSTSSSSNVKVMAASNANTEHT 725

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 796
              +E E+H + +LD  TFE + ++ L  +E+  +++S  F +D   YY VGTA V PEE 
Sbjct: 726  FGDEVEVHSLLVLDQHTFEVLHSHQLMQYEFATALMSGRFGEDPTTYYVVGTAMVYPEEA 785

Query: 797  EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            EP +GRI+VF   DGKL  +AEKE KGA Y+L  FNGKLLA+IN  ++L++W       +
Sbjct: 786  EPKQGRIIVFRFHDGKLTQVAEKEIKGAAYTLTEFNGKLLASINSTVRLFEWT----AEK 841

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
            EL+ EC +  +I+ALY++T+GDFI+VGDLM+S++LL YK  EG  EE ARDYN NWM+++
Sbjct: 842  ELRVECSYFNNIIALYLKTKGDFILVGDLMRSVTLLSYKPMEGCFEEIARDYNPNWMTSI 901

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 976
            ++LDDD +LGAEN+FN+FT +K+S   TDEER  L+ VG YHLGEFVN FRHGSLVM+ P
Sbjct: 902  DVLDDDTFLGAENSFNIFTCQKDSAATTDEERQHLQEVGLYHLGEFVNVFRHGSLVMQHP 961

Query: 977  DSDVGQIP-TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                     +V+FGTVNG +G++  LP E YLFL ++Q  L K IK VG + H  WRSF+
Sbjct: 962  GECTSPTQGSVLFGTVNGALGLVTQLPQEFYLFLLEVQNKLAKTIKSVGKVEHAFWRSFH 1021

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELT 1085
             E+KT  A  F+DGDLIESFLDLSR +M E+ + + +          +V++L K +EELT
Sbjct: 1022 TERKTEPATGFIDGDLIESFLDLSRDKMQEVVQGLQMDDGSGMKREAAVDDLVKMIEELT 1081

Query: 1086 RLH 1088
            R+H
Sbjct: 1082 RIH 1084


>gi|345498295|ref|XP_001607743.2| PREDICTED: DNA damage-binding protein 1-like [Nasonia vitripennis]
          Length = 1140

 Score = 1110 bits (2870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/1143 (49%), Positives = 775/1143 (67%), Gaps = 68/1143 (5%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 7    HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNMRLEIYLVTPEGLRPLKEVGIYGKIAV 66

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   + E  E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 67   VKFFRPQHEKKDLLFLLTTRYNAMILECVGEGEDIEIITKAHGNVADRIGKASETGIKAV 126

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR++E  V D+ FL+GC  PT+++++Q
Sbjct: 127  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQNVQDVNFLHGCTNPTLILIHQ 186

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 187  D-INGRHVKTHEISLRDKEFVKIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDG 245

Query: 243  NAF-KAIP--IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
              +   +P  I+ S    Y +VD  G RYLLGD AG L +L +  +K+      +  LK+
Sbjct: 246  TTYVTVVPPIIKQSTISCYAKVDNQGLRYLLGDLAGHLFMLFLEQDKKADGSMVIKDLKV 305

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V++IGS  GDSQLIKLN +PD  GSY   +E + NL PIVD 
Sbjct: 306  ELLGEVSIPECITYLDNGVIFIGSRLGDSQLIKLNTKPDENGSYCSTMETFTNLAPIVDM 365

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+  + + FD
Sbjct: 366  AVVDLERQGQGQIVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALKVDSVN-FD 424

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EETEI GF +  QT    +   + ++Q+T  S RL+S+
Sbjct: 425  NTLVLSFVGQTRILMLNGE-EVEETEIPGFVADEQTFHTGNVTNDVIIQITPTSARLISN 483

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             S  + +EW+     +++V   N +QVL ATG   L YLEI D  +    +  L++E++C
Sbjct: 484  KSSSVISEWEPDNKRTISVVACNGTQVLCATGN-DLFYLEINDNQIVSKGYTTLQHEVAC 542

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            +DI+P+ +  S ++I AVG+WTDISVRI +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 543  VDISPL-DGSSEAKIVAVGLWTDISVRILTLPKLEEINKELLGGEIIPRSILMTCFEGNT 601

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F LN + G L D+KKV+LGTQP  LRTF S +TT+VFA SDRPTVIY
Sbjct: 602  YLLCALGDGSMYYFTLNKQNGMLADKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY 661

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++ DSLA+A +  +TIGTID+IQKLHIR++PL E 
Sbjct: 662  SSNHKLVFSNVNLKEVNHMCSLNAESYSDSLALATDNTVTIGTIDEIQKLHIRTVPLYES 721

Query: 715  PRRICHQEQSRTFAICSLK--------------------------------------NQS 736
            PRRI +QE ++TF + +++                                         
Sbjct: 722  PRRIAYQESTQTFGVITMRVDIQESNGVNIARPSASTQAASISNSNHIPTHNKPSNTASE 781

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 796
              +E E+H + ++D  TFE +  + L   EY  S++S    +D   YY VGTA + P+E+
Sbjct: 782  IGQEVEIHNLLIVDQHTFEVLHAHTLVPTEYAMSLISTKLGEDPTPYYIVGTAMINPDES 841

Query: 797  EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            EP  GRIL++   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       +
Sbjct: 842  EPKSGRILLYHWNDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWT----AEK 897

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
            EL+ EC H  +I+ALY++T+GDF++VGDLM+S++LL YK  EG+ EE ARDYN NWM+++
Sbjct: 898  ELRLECSHFNNIIALYLKTKGDFVLVGDLMRSVTLLQYKTMEGSFEEIARDYNPNWMTSI 957

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-L 975
            EILDDD +LGAEN FNLF  +K+S   ++EER +++ VG++HLG+ VN FRHGSLVM+ L
Sbjct: 958  EILDDDTFLGAENCFNLFVCQKDSAATSEEERQQMQEVGQFHLGDMVNVFRHGSLVMQHL 1017

Query: 976  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             +S       V+FGTV G IG++  +P   Y FL  L+  L  VIK VG + H  WRSFN
Sbjct: 1018 GESSTPTHGCVLFGTVCGAIGLVTQIPSTFYEFLRNLEDRLTSVIKSVGKIEHNFWRSFN 1077

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELT 1085
             + K    + F+DGDLIESFLDLS  +M E++  + +          +V++L K VE+LT
Sbjct: 1078 TDLKIEQCEGFIDGDLIESFLDLSHEKMAEVAMGIVIDDGSGMKKEATVDDLVKIVEDLT 1137

Query: 1086 RLH 1088
            R+H
Sbjct: 1138 RIH 1140


>gi|58383228|ref|XP_312466.2| AGAP002472-PA [Anopheles gambiae str. PEST]
 gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anopheles gambiae str. PEST]
          Length = 1138

 Score = 1109 bits (2869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/1142 (48%), Positives = 770/1142 (67%), Gaps = 65/1142 (5%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+VTA KPT VT    GNFTSP +LNLI+AK +R+EI+L+TP+GL+P+ ++ I G+IA 
Sbjct: 4    NYIVTAQKPTAVTACVTGNFTSPTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            ++LFRP  E +D +FI T RY   +LQ   +    E+IT+A G+V+DR+G+P + G + +
Sbjct: 64   MKLFRPAEETKDLIFILTHRYNAMILQCAVQGDDIEIITKAHGNVADRVGKPAETGILAV 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY+GLFK+IP D      +A ++R+EE+ V D++FLYG   PT++V++Q
Sbjct: 124  IDPKARVIGMRLYEGLFKIIPLDKDTNELKATSLRMEEMHVQDVEFLYGTTHPTLIVIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RH+KT+E++LKDK+F +  W Q+N++  A +LI VP PL G ++IG+E+IVY   
Sbjct: 184  D-INGRHIKTHEISLKDKEFTKIAWKQDNVETEATMLIAVPMPLGGAIVIGQESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK----VTGLKI 294
            +++ A+    I+ S    Y R+D+ G RYLLG+ AG L ++ + T E  K    V  +K+
Sbjct: 243  DSYVAVAPAIIKQSTINCYARIDSKGLRYLLGNMAGNLFMMFLETEENAKGQTTVRDIKV 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE +I   I+YLDN V++IGS +GDSQL+KLN      G+YV ++E + NL PIVD 
Sbjct: 303  ELLGEITIPECITYLDNGVLFIGSRHGDSQLVKLNTTAGDNGAYVMLMETFTNLAPIVDM 362

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PF 413
            CVVDLERQGQGQ++TCSG++K+GSLRI+RNGIGI E A ++L GIKGMW+LR   DD P+
Sbjct: 363  CVVDLERQGQGQMITCSGSFKEGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSPY 422

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  L++SF+  TR+L ++  DE+EETEI G     QT +C +  + Q++QVT  S RL+S
Sbjct: 423  DNTLILSFVGHTRVLMLS-GDEVEETEIAGILGDQQTFYCANVSHGQILQVTPSSARLIS 481

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              ++ +  EWK P    + V  AN +Q++ A+    + Y+EIGDG L       L YE++
Sbjct: 482  CDNKAMICEWKPPDNKRIGVVGANTTQIVCASAQ-DVYYVEIGDGKLEYKGQTTLSYEVA 540

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLD++P+ +N + S+  AVG+WTDIS  +  +P L L+ KE LGGEIIPRS+L+ AFEGI
Sbjct: 541  CLDVSPLEDNATRSEFVAVGLWTDISACVLKVPTLELLHKEKLGGEIIPRSILMAAFEGI 600

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
            +YLLCALGDG +  F+LN  TG LT++KKV+LGTQP  L+TF S +TT+VFA SDRPTVI
Sbjct: 601  NYLLCALGDGSMYYFVLNKATGCLTEQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVI 660

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV+HMC  N+ A+ DSLA+A    +  GTID+IQKLHIR++PLGE
Sbjct: 661  YSSNHKLVFSNVNLKEVNHMCSLNAEAYQDSLALATRNSVIFGTIDEIQKLHIRTVPLGE 720

Query: 714  HPRRICHQEQSRTFAICSLK-------------------------------------NQS 736
             PRRI +QE S+TF + + +                                     N  
Sbjct: 721  SPRRIAYQEASQTFGVITFRMDVQDSSGLTPARQSASTQTNNITQSSGMGLLKPGASNTE 780

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 796
              +E E+H + ++D  TFE +  +     EY  S++S    +D N Y+ VGT  V PEE 
Sbjct: 781  FGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYALSLMSAKLGNDPNTYFIVGTGLVNPEEP 840

Query: 797  EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            EP  GRI+++   D +L+++++KE KGA YSL  FNG++LA IN  ++LY+W   DD  +
Sbjct: 841  EPKTGRIIIYRYADNELKMVSDKEVKGACYSLVEFNGRVLACINSTVRLYEWT--DD--K 896

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
            +L+ EC H  ++LALY +T+GDFI+VGDLM+SI+LL YK  EG+ EE ARDY  NWM+AV
Sbjct: 897  DLRLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAV 956

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-L 975
            EILDDD +LGA+N+ NLF   K+S   TDEER ++  V ++HLG+ VN FRHGSLVM+ +
Sbjct: 957  EILDDDAFLGADNSNNLFVCLKDSAATTDEERQQMPEVAQFHLGDMVNVFRHGSLVMQNI 1016

Query: 976  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             +        V+FGTV+G IG++  +  + Y FL KLQ NL   IK VG ++H  WRSF+
Sbjct: 1017 SERSTPTTGCVLFGTVSGAIGLVTQIQSDFYEFLRKLQENLTNTIKSVGKIDHSYWRSFH 1076

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE---------ELCKRVEELTR 1086
             E K    + F+DGDL+ESFLDLSR +M E S  + + VE         ++ K VE+LTR
Sbjct: 1077 TETKMERCEGFIDGDLVESFLDLSREKMREASLGLEIDVEGTKREATVDDIIKIVEDLTR 1136

Query: 1087 LH 1088
            +H
Sbjct: 1137 IH 1138


>gi|340714589|ref|XP_003395809.1| PREDICTED: DNA damage-binding protein 1-like [Bombus terrestris]
          Length = 1141

 Score = 1108 bits (2866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/1144 (49%), Positives = 777/1144 (67%), Gaps = 69/1144 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 7    HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAV 66

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   + E+ E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 67   VKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAV 126

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR+EE QV D+ FL+GCA PT+++++Q
Sbjct: 127  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQ 186

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 187  D-INGRHVKTHEISLRDKEFVKVPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDG 245

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
            N + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 246  NTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFVEQEKKPDGTQVVKDLKV 305

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+++GS +GDSQL+KL  + D  GSY   +E + NL PI+D 
Sbjct: 306  ELLGEISIPECITYLDNGVIFVGSRFGDSQLVKLITKADENGSYCVPMETFTNLAPIIDM 365

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+    + FD
Sbjct: 366  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGIKGMWALKVGGGN-FD 424

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  S RL+S 
Sbjct: 425  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISH 483

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ + +EW+     +++V   N +QVL ATG   L Y+EI  G +     A L+YE++C
Sbjct: 484  ETKTVVSEWEPENKRTISVVACNGTQVLCATGN-DLFYMEISYGQIVPKGFATLQYEVAC 542

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+ +  + ++IAAVG+WT ISVRI +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 543  LDISPL-DGHTEAKIAAVGLWTHISVRILTLPALEEINKELLGGEIIPRSILMTCFEGNT 601

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F L+ + G L+D+KKV+LGTQP  LRTF S  TT+VFA SDRPTVIY
Sbjct: 602  YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIY 661

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 662  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 721

Query: 715  PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
            PRRI +QE S+TF + +++                                         
Sbjct: 722  PRRIAYQESSQTFGVITMRVDIQDSSGVSIVRHSASTQAASTSSSSHIASYNKPTGHTAS 781

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
               +E E+H + ++D  TFE +  + L   EY  S++S    +D   YY VGTA V P+E
Sbjct: 782  DICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVGTALVHPDE 841

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP  GRIL++   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       
Sbjct: 842  TEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLTEFNGKLLASINSTVRLFEWT----AE 897

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL+ EC H  +I+ALY++T+GDFI+VGDLM+S++LL YK  EG  EE ARDYN NWM+A
Sbjct: 898  KELRLECSHFNNIIALYLKTKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTA 957

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            +EILDDD +LGAEN FNLF  +K+S   +++ER +++ VG++HLG+ VN FRHGSLVM+ 
Sbjct: 958  IEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQN 1017

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L +S       V+FGTV+G IG++  +P   Y FL  L+  L  VIK VG + H  WRSF
Sbjct: 1018 LGESSTPTQGCVLFGTVSGAIGLVTQIPFTFYEFLRNLEERLTGVIKSVGKIEHNFWRSF 1077

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEEL 1084
            N E K    + F+DGDLIESFLDLS  +M +++  + +          +V++L K VE+L
Sbjct: 1078 NTELKIEQCEGFIDGDLIESFLDLSPNKMADVASGLMIDDPSGMKKEATVDDLVKIVEDL 1137

Query: 1085 TRLH 1088
            TR+H
Sbjct: 1138 TRIH 1141


>gi|350410909|ref|XP_003489174.1| PREDICTED: DNA damage-binding protein 1-like [Bombus impatiens]
          Length = 1141

 Score = 1107 bits (2864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/1144 (49%), Positives = 776/1144 (67%), Gaps = 69/1144 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 7    HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAV 66

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   + E+ E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 67   VKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAV 126

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR+EE QV D+ FL+GCA PT+++++Q
Sbjct: 127  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQ 186

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 187  D-INGRHVKTHEISLRDKEFVKVPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDG 245

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
            N + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 246  NTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFVEQEKKPDGTQVVKDLKV 305

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+++GS  GDSQL+KL  + D  GSY   +E + NL PIVD 
Sbjct: 306  ELLGEISIPECITYLDNGVIFVGSRLGDSQLVKLITKADENGSYCVPMETFTNLAPIVDM 365

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+    + FD
Sbjct: 366  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGIKGMWALKVGGGN-FD 424

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  S RL+S 
Sbjct: 425  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISH 483

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ + +EW+     +++V   N +QVL ATG   L Y+EI  G +     A L+YE++C
Sbjct: 484  ETKTVVSEWEPENKRTISVVACNGTQVLCATGN-DLFYMEISCGQIVPKGFATLQYEVAC 542

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+ +  + ++IAAVG+WT ISVRI +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 543  LDISPL-DGHTEAKIAAVGLWTHISVRILTLPALEEINKELLGGEIIPRSILMTCFEGNT 601

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F L+ + G L+D+KKV+LGTQP  LRTF S  TT+VFA SDRPTVIY
Sbjct: 602  YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIY 661

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 662  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 721

Query: 715  PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
            PRRI +QE S+TF + +++                                         
Sbjct: 722  PRRIAYQESSQTFGVITMRVDIQDSSGVSIVRHSASTQAASTSSSSHIASYNKPTGHTAS 781

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
               +E E+H + ++D  TFE +  + L   EY  S++S    +D   YY VGTA V P+E
Sbjct: 782  DICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVGTALVHPDE 841

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP  GRIL++   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       
Sbjct: 842  TEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLTEFNGKLLASINSTVRLFEWT----AE 897

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL+ EC H  +I+ALY++T+GDFI+VGDLM+S++LL YK  EG  EE ARDYN NWM+A
Sbjct: 898  KELRLECSHFNNIIALYLKTKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTA 957

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            +EILDDD +LGAEN FNLF  +K+S   +++ER +++ VG++HLG+ VN FRHGSLVM+ 
Sbjct: 958  IEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQN 1017

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L +S       V+FGTV+G IG++  +P   Y FL  L+  L  VIK VG + H  WRSF
Sbjct: 1018 LGESSTPTQGCVLFGTVSGAIGLVTQIPFTFYEFLRNLEERLTGVIKSVGKIEHNFWRSF 1077

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEEL 1084
            N E K    + F+DGDLIESFLDLS  +M +++  + +          +V++L K VE+L
Sbjct: 1078 NTELKIEQCEGFIDGDLIESFLDLSPNKMADVASGLMIDDPSGMKKEATVDDLVKIVEDL 1137

Query: 1085 TRLH 1088
            TR+H
Sbjct: 1138 TRIH 1141


>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1138

 Score = 1105 bits (2859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/1146 (48%), Positives = 773/1146 (67%), Gaps = 73/1146 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+VTA KPT VT    GNFTS  +LNLI+AK +R+EI+L+TP+GL+P+ +V I G+IA 
Sbjct: 4    NYIVTAQKPTAVTACVTGNFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEVGINGKIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVL--QWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++LFRP    +D LFI T RY   +L  Q   +  E+IT+A G+V+DR+G+P + G + +
Sbjct: 64   MKLFRPAEAQKDLLFILTHRYNAMILACQVQGDDIEIITKAHGNVADRVGKPAETGILAV 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY+GLFK+IP D      +A ++R+EE+ V D++FLYG A PT++V++Q
Sbjct: 124  IDPKARVIGMRLYEGLFKIIPLDRDTHELKATSLRMEEMHVQDVEFLYGTAHPTLIVIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RH+KT+E+ LKDKDF +  W Q+N++  A +LIPVP PL G ++IG+E++VY   
Sbjct: 184  D-LNGRHIKTHEINLKDKDFTKIAWKQDNVETEATMLIPVPTPLGGAIVIGQESVVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
            +++ A+    I+ S    Y RVD+ G RYLLG+  G L ++ +  E+       V  +K+
Sbjct: 243  DSYVAVAPAIIKQSTINCYARVDSRGFRYLLGNMIGHLFMMFLETEENTRGQLTVKDIKV 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE +I   I+YLDN V++IGS +GDSQL+KLN    A G+YV V+E + NL PI+D 
Sbjct: 303  ELLGEITIPECITYLDNGVLFIGSRHGDSQLVKLNTTAAASGAYVTVMETFTNLAPIIDM 362

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PF 413
            C+VDLERQGQGQ++TCSG+YK+GSLRI+RNGIGI E A ++L GIKGMW+LR   DD P+
Sbjct: 363  CIVDLERQGQGQMITCSGSYKEGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSPY 422

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+  TRIL ++ E E+EETEI GF S  QT +C +  + Q++QVT  + RL+S
Sbjct: 423  DNTLVLSFVGHTRILMLSGE-EVEETEIPGFLSDQQTFYCANVDFGQIIQVTPMTARLIS 481

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              ++ +  EWK P    + V   N+ Q++ AT    + Y+EI  G L       L+YE++
Sbjct: 482  CDNKSMICEWKPPDDKRIGVVACNSCQMVCATAR-DIYYIEIEAGKLVHKSTVTLDYEVA 540

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI+P+ E  + S++ AVG+WT+IS  I  LP+L  + KE LGGEIIPRS+L+  FEGI
Sbjct: 541  CLDISPLDEPATRSELVAVGLWTEISACILRLPNLEFVHKEKLGGEIIPRSILMACFEGI 600

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG +  F+++  T  LTD+KKV+LGTQP  L+TF S +TT+VFA SDRPTVI
Sbjct: 601  IYLLCALGDGSMFYFVVDKTTHRLTDQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVI 660

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV+HMC  N+ ++ DSLA+A +  + +GTID+IQKLHIR++PLGE
Sbjct: 661  YSSNHKLVFSNVNLKEVNHMCSLNAESYQDSLALATKNSVILGTIDEIQKLHIRTVPLGE 720

Query: 714  HPRRICHQEQSRTFAICSLK-------------------------------------NQS 736
             PRRI +QE S+TF + +++                                     N  
Sbjct: 721  SPRRIAYQEASQTFGVITVRMDIQDSSGLTPSRQSASTQTSNVTSSSNMGLLKPGASNTE 780

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 796
              +E E+H + ++D  TFE +  +     EY  S++S    +D   YY VGTA V PEE 
Sbjct: 781  FGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYVLSLISAKLGNDPATYYIVGTAMVNPEER 840

Query: 797  EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            EP  GRI+++   DG L  ++EKE KGA YSL  FNG++LA IN  ++LY+W   DD  +
Sbjct: 841  EPKVGRIIIYHYADGALTQVSEKEIKGACYSLVEFNGRVLATINSTVRLYEWT--DD--K 896

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
            +L+ EC H  ++LALY +T+GDFI+VGDLM+SI+LL YK  EG+ EE ARDY   WM+AV
Sbjct: 897  DLRLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPKWMTAV 956

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 976
            EILDDD +LGAEN+ NLF   K+S   TD+ER ++  V ++HLG+ VN FRHGSLVM+  
Sbjct: 957  EILDDDAFLGAENSNNLFVCLKDSAATTDDERQQMPEVAQFHLGDMVNVFRHGSLVMQ-- 1014

Query: 977  DSDVGQ--IPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
              ++G+   PT   V+FGTV+G IG++  +P + Y FL KLQ NL   IK VG ++H  W
Sbjct: 1015 --NIGERTTPTSGCVLFGTVSGAIGLVTQIPPDYYEFLRKLQENLTNTIKSVGRIDHTYW 1072

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE---------ELCKRVE 1082
            RSF+ E KT +++ F+DGDL+ESFLDL+R +M E +  + + VE         ++ K VE
Sbjct: 1073 RSFHTEMKTENSEGFIDGDLVESFLDLTREKMHEAALGLQIDVEGTKKEANVDDIIKIVE 1132

Query: 1083 ELTRLH 1088
            +LTR+H
Sbjct: 1133 DLTRIH 1138


>gi|328788389|ref|XP_396048.3| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Apis
            mellifera]
          Length = 1141

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/1144 (49%), Positives = 774/1144 (67%), Gaps = 69/1144 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 7    HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAV 66

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   + E+ E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 67   VKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAV 126

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR+EE QV D+ FL+GCA PT+++++Q
Sbjct: 127  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQ 186

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 187  D-INGRHVKTHEISLRDKEFVKIPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDG 245

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
            N + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 246  NTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFVEQEKKADGTQVVKDLKV 305

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+++GS  GDSQL+KL  + D  GSY   +E + NL PIVD 
Sbjct: 306  ELLGEISIPECITYLDNGVIFVGSRLGDSQLVKLITKADENGSYCVPMETFTNLAPIVDM 365

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+    + FD
Sbjct: 366  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGIKGMWALKIGGGN-FD 424

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  S RL+S 
Sbjct: 425  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISY 483

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ + +EW+     +++V   N +QVL ATG   L YLEI  G +       L+YE++C
Sbjct: 484  ETKTVVSEWEPENKRTISVVACNGTQVLCATGN-DLFYLEISCGQILPKGFTTLQYEVAC 542

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+  N + ++IAAVG+WT ISV I +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 543  LDISPLDGN-TEAKIAAVGLWTHISVHILTLPALEEINKELLGGEIIPRSILMTCFEGNT 601

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F L+ + G L+D+KKV+LGTQP  LRTF S  TT+VFA SDRPTVIY
Sbjct: 602  YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIY 661

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 662  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 721

Query: 715  PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
            PRRI +QE S+TF + +++                                         
Sbjct: 722  PRRIAYQESSQTFGVITMRVDIQDSSGVSIVRHSASTQAASTSSSSHIASYNKPTGHTAS 781

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
               +E E+H + ++D  TFE +  + L   EY  S++S    +D   YY VGTA V P+E
Sbjct: 782  DICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVGTALVHPDE 841

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP  GRIL++   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       
Sbjct: 842  TEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLTEFNGKLLASINSTVRLFEWT----AE 897

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL+ EC H  +I+ALY++++GDFI+VGDLM+S++LL YK  EG  EE ARDYN NWM+A
Sbjct: 898  KELRLECSHFNNIIALYLKSKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTA 957

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            +EILDDD +LGAEN FNLF  +K+S   +++ER +++ VG++HLG+ VN FRHGSLVM+ 
Sbjct: 958  IEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQN 1017

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L +S       V+FGTV+G IG++  +P   Y FL  L+  L  VIK VG + H  WRSF
Sbjct: 1018 LGESSTPTQGCVLFGTVSGAIGLVTQIPFIFYEFLRNLEDRLTSVIKSVGKIEHNFWRSF 1077

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEEL 1084
            N E K    + F+DGDLIESFLDLS  +M E++  + +          +V++L K VE+L
Sbjct: 1078 NTELKIEQCEGFIDGDLIESFLDLSPDKMAEVASGLMIDDPSGMKKEATVDDLVKIVEDL 1137

Query: 1085 TRLH 1088
            TR+H
Sbjct: 1138 TRIH 1141


>gi|383863765|ref|XP_003707350.1| PREDICTED: DNA damage-binding protein 1-like [Megachile rotundata]
          Length = 1138

 Score = 1104 bits (2856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/1141 (49%), Positives = 778/1141 (68%), Gaps = 66/1141 (5%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 7    HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAV 66

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELI--TRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   E  E+   T+A G+V+DRIG+ ++ G   +
Sbjct: 67   VKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEEIEIITKAHGNVADRIGKASETGIKAV 126

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR++E QV D+ FL+GCA PT+++++Q
Sbjct: 127  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQ 186

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 187  D-INGRHVKTHEISLRDKEFVKIPWRQDNVEREATMVIPVPSPICGAIIIGQESILYHDG 245

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTGLKI 294
              + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK     + V  LK+
Sbjct: 246  TTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFLEQEKNPDGTQVVKDLKV 305

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+++GS  GDSQLIKL  + D  GSY   +E + NL PIVD 
Sbjct: 306  ELLGEISIPECITYLDNGVIFVGSRLGDSQLIKLITKADENGSYCVPMETFTNLAPIVDM 365

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+LR    + FD
Sbjct: 366  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGIKGMWALRIGGGN-FD 424

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  S RL+S 
Sbjct: 425  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISH 483

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ + +EW+     +++V   N +QVL ATG   L Y+EI  G +     A L+YE++C
Sbjct: 484  ETKTVVSEWEPENKRTISVVACNGTQVLCATGN-DLFYMEISCGQIVPKGFATLQYEVAC 542

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+  N + ++IAAVG+WTDISVRI +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 543  LDISPLDGN-TEAKIAAVGLWTDISVRILTLPALEEINKELLGGEIIPRSILMTCFEGNT 601

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F L+ + G L+D+KKV+LGTQP  LRTF S +T +VFA SDRPTVIY
Sbjct: 602  YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLSTINVFACSDRPTVIY 661

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 662  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 721

Query: 715  PRRICHQEQSRTFAICSLK--------------------------------NQSCA---- 738
            PRRI +QE S+TF + +++                                N+  A    
Sbjct: 722  PRRIAYQENSQTFGVITMRVDIQDSSGVSIVRHSASTQAASTSSSSHIASHNKPTASDIS 781

Query: 739  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 798
            +E E+H + ++D  TFE +  + L   EY  S++S    +D   YY VGTA V P+E EP
Sbjct: 782  QEIEVHNLLIIDQHTFEVLHAHMLMPNEYALSLISTKLGEDPTFYYVVGTALVNPDETEP 841

Query: 799  TKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 858
              GRIL++   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       +EL
Sbjct: 842  KMGRILLYHWNDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWT----AEKEL 897

Query: 859  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
            + EC H  +I+ALY++T+GDF++VGDLM+S++LL YK  EG+ EE ARDYN NWM+AVEI
Sbjct: 898  RLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTAVEI 957

Query: 919  LDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPD 977
            LDDD +LGAEN FNLF  +K+S   +++ER +++ +G++HLG+ VN FRHGSLVM+ L +
Sbjct: 958  LDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEIGQFHLGDMVNVFRHGSLVMQNLGE 1017

Query: 978  SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 1037
            S       V+FGTV+G IG++  +P   Y FL  L+  L +VIK VG + H  WRSFN E
Sbjct: 1018 SSTPTQGCVLFGTVSGAIGLVTQIPFTFYEFLRHLEYRLTEVIKSVGKIEHRFWRSFNTE 1077

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRL 1087
             K  + + F+DGDLIESFLDLS  +M E++  +            +V++L K VE+LTR+
Sbjct: 1078 LKVENCEGFIDGDLIESFLDLSPDKMAEVAVDLMMDDSSGMRKEATVDDLVKIVEDLTRI 1137

Query: 1088 H 1088
            H
Sbjct: 1138 H 1138


>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
            nagariensis]
 gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
            nagariensis]
          Length = 1104

 Score = 1102 bits (2851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/1113 (50%), Positives = 775/1113 (69%), Gaps = 67/1113 (6%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYVVTAHKPT VTH+ V +FT P ++NLI A  TR+EI  L PQGL  +LDVPIYG I+
Sbjct: 1    FNYVVTAHKPTAVTHAVVASFTGPNDVNLITACSTRLEIRTLGPQGLSAVLDVPIYGNIS 60

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             L++FRP     D LFI TE+YKFCVLQ+DA   +L+TRA GDV+DRIGRP +NGQ+G++
Sbjct: 61   ALQVFRPRDLHADLLFILTEKYKFCVLQYDAAKGQLLTRANGDVADRIGRPAENGQLGVV 120

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNK-GQLKEAFNIRLEELQVLDIKFLYGCAKPT------ 176
            DP CRLIGLHLYDG+ KVIP D++ GQL EAF++RLEEL VLD+ +L+            
Sbjct: 121  DPACRLIGLHLYDGMLKVIPMDDRSGQLSEAFSVRLEELSVLDMAWLHPQPPGGGGGGGS 180

Query: 177  -----IVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLI 231
                 + VL+QD K ARHVKTYE+ L   D ++GPW Q ++D+GA LLIPVP PL GV++
Sbjct: 181  PGRPLLCVLHQDPKGARHVKTYEMQLGANDLLDGPWQQQHVDSGAALLIPVPSPLGGVVV 240

Query: 232  IGEETIVYCSANAFKA---IPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK 288
            +GE  + Y      +A    P+R +I  A+  VD DGSR+LLG+  G + LLV+ H+  +
Sbjct: 241  VGENVVSYLGGPGGQAPVSAPLRQTIVTAWCPVDPDGSRFLLGNRQGGMQLLVLAHDGSR 300

Query: 289  VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP-DAKGSYVEVLERYVN 347
            V+GL+ E LG T   S ++YLD+ + ++GS  GDSQL++++ QP +   +Y+E+++ + +
Sbjct: 301  VSGLRTEPLGYTCAPSCLAYLDSGLTFVGSRSGDSQLVRISAQPVNQPPTYLELVDSFPS 360

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
            L PIVDF V+DLERQGQGQ+V CSG   DGSLR+VRNGIGIN QA+VEL GIKG+WSLRS
Sbjct: 361  LAPIVDFVVMDLERQGQGQLVMCSGIDSDGSLRVVRNGIGINRQATVELPGIKGVWSLRS 420

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
              DD +D +L+++F+ ETR+LA+N E+EL+E E+ GF S +QTL+C +   + L+Q +  
Sbjct: 421  HYDDEYDKYLLLTFVGETRLLALNTEEELDEAELPGFDSGSQTLWCGNMATDHLLQASGS 480

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI---GDGI--LTE 522
            SVRLV + S +L +EW+  PG++++VA  + +QV++ATGGGHLVYLE+    +G+  + E
Sbjct: 481  SVRLVDTASLQLVSEWRPAPGFAIHVAAGSPTQVVVATGGGHLVYLEVVRRPEGVVEVVE 540

Query: 523  VKHAQLEYEISCLDINPI--------GENP-SYSQIAAVGMWTDISVRIFSLPDLNLITK 573
            + +  L+ E++C+D++P+        GE P   S + AVG W D ++++ S+P L  ++ 
Sbjct: 541  ISNVVLDSEVACVDVSPLMLQQQPLAGEWPGGRSSVVAVGRW-DQTMQLLSVPSLAPLSS 599

Query: 574  EHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
              LGGE+IPRSVL  A EG+ Y +  LGDG L  + L+  TG L+D+K++ LGT+PI LR
Sbjct: 600  TPLGGEVIPRSVLCTALEGVPYCMVGLGDGALHTWRLDPATGGLSDKKRLVLGTKPIMLR 659

Query: 634  TFSSKNT------------------THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
            TF +                       VFAASDRPTV+YSSNKKLLYSN+N  +V+ +  
Sbjct: 660  TFRTAAAVSGGGGGSLRGSGGGHGGVSVFAASDRPTVVYSSNKKLLYSNLNENDVAFLAS 719

Query: 676  FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ 735
            F+SAAFP SLA+A EG LTIGT D+IQKLH+R++PLGE+PRRI H E +R   + +++  
Sbjct: 720  FHSAAFPRSLAVASEGALTIGTADEIQKLHVRAVPLGENPRRIAHHEGARMLGVLTMRLD 779

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS-------NVYYCVGT 788
            S  + SE  F+RLLDD TF+ +++Y L   E  CS+ +   S +        N  + VGT
Sbjct: 780  S--DGSERSFLRLLDDTTFDVVASYALAPGEMPCSLAAWPGSSNGTAAVGALNACFLVGT 837

Query: 789  AYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF-NGKLLAAINQKIQLYK 847
            A+++PEE EPTKGRILV       ++L+ EKE KGA Y++  F   K+LA++N K+    
Sbjct: 838  AFIVPEEPEPTKGRILVL----EHVRLVTEKEVKGAAYNVLPFVKDKILASVNSKVPASG 893

Query: 848  WMLRDDGTR-ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
              L   G R EL SEC + G+ILALY+ TRG+ +VVGDLM+S+SLL Y  E+G +E RA 
Sbjct: 894  CDL--GGVRVELASECSYLGNILALYLATRGNLVVVGDLMRSVSLLSYNVEQGVLEHRAA 951

Query: 907  DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
            DYN+ W ++VE LDDD YL  +N+ NL  +R+N++ ATDEER RL+VVGEYH G FVNRF
Sbjct: 952  DYNSGWTTSVEALDDDTYLEGDNHLNLVVLRRNADSATDEERARLQVVGEYHTGTFVNRF 1011

Query: 967  RHGSLVMRLPDSDVGQIPT-VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 1025
            RHGSLVMR PDS+   +P  ++FG  +G +GVIA LP   Y  L KLQ+ LR+V++GVGG
Sbjct: 1012 RHGSLVMRPPDSEFVSLPVPLLFGGTDGRLGVIARLPPGLYEMLTKLQSALRQVVRGVGG 1071

Query: 1026 LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
            L+HE W +F+NE++T DAK F+DGDLIE+FLDL
Sbjct: 1072 LSHEAWIAFSNERRTADAKGFVDGDLIETFLDL 1104


>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
 gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
          Length = 1138

 Score = 1102 bits (2851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/1146 (47%), Positives = 775/1146 (67%), Gaps = 73/1146 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+VTA KPT VT    GNFTS  +LNLI+AK +R+EI+L+TP+GL+P+ ++ I G+IA 
Sbjct: 4    NYIVTAQKPTAVTACVTGNFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            ++LFRP    +D +FI T RY   +L+   +    E+IT+A G+V+DR+G+P + G + +
Sbjct: 64   MKLFRPAEAQKDLIFILTHRYNAMILECAVQGDDIEIITKAHGNVADRVGKPAETGILAV 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY+GLFK+IP D      +A ++R+EE+ V D++FLYG   PT++V++Q
Sbjct: 124  IDPKARVIGMRLYEGLFKIIPLDRDTHELKATSLRMEEVHVQDVEFLYGTQHPTLIVIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RH+KT+E+ LKDKDF +  W Q+N++  A +LIPVP PL G ++IG+E++VY   
Sbjct: 184  D-LNGRHIKTHEINLKDKDFTKIAWKQDNVETEATMLIPVPTPLGGAIVIGQESVVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK----VTGLKI 294
            +++ A+    I+ S    Y RVD+ G RYLLG+ +G L ++ + T E  K    V  +K+
Sbjct: 243  DSYVAVAPAIIKQSTINCYARVDSKGFRYLLGNMSGHLFMMFLETEENSKGLLSVKDIKV 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLG+ +I   I+YLDN V++IGS +GDSQL+KLN      G+YV V+E + NL PI+D 
Sbjct: 303  ELLGDITIPECITYLDNGVLFIGSRHGDSQLVKLNTTAGDNGAYVTVMETFTNLAPIIDM 362

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PF 413
            C+VDLE+QGQGQ++TCSG+YK+GSLRI+RNGIGI E A ++L GIKGMW+LR   DD P+
Sbjct: 363  CIVDLEKQGQGQMITCSGSYKEGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSPY 422

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D  LV+SF+  TRIL ++ E E+EETEI GF S  QT +C +  + Q++QVT  + RL+ 
Sbjct: 423  DNTLVLSFVGHTRILTLSGE-EVEETEIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQ 481

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              ++ +  EWK P    ++V   N+ Q++ AT    + Y+EIG+  L       L+YE++
Sbjct: 482  CDNKSMICEWKPPDDKRISVVACNSCQMVCATAC-DIYYIEIGESKLVHKSTVTLDYEVA 540

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI+P+ +N +++++ AVG+WTDIS  I  LP+L ++  E LGGEIIPRS+L+  FEGI
Sbjct: 541  CLDISPLEDNATHAELVAVGLWTDISACILRLPNLEVVHTEKLGGEIIPRSILMAHFEGI 600

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG +  F+L+  T  LTD+KKV+LGTQP  L+TF S +TT+VFA SDRPTVI
Sbjct: 601  VYLLCALGDGSMFYFVLDKNTNRLTDQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVI 660

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV+HMC  N+ A+ DSLA+A +  + +GTID+IQKLHIR++PLGE
Sbjct: 661  YSSNHKLVFSNVNLKEVNHMCSLNAEAYQDSLALATKNSVILGTIDEIQKLHIRTVPLGE 720

Query: 714  HPRRICHQEQSRTFAICSLK-------------------------------------NQS 736
             PRRI +QE S+TF + +++                                     N  
Sbjct: 721  SPRRIAYQEASQTFGVITVRTDIQDSSGLTPSRQSASTQTTNVTLSTNMGLLKAGASNAE 780

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 796
              +E E+H + ++D  TFE +  +     EY  S++S    +D N YY VGTA V PEE 
Sbjct: 781  FGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYAMSLISAKLGNDPNTYYIVGTALVNPEEP 840

Query: 797  EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            EP  GRI+++   DG L  ++EKE KG+ YSL  FNG++LA+IN  ++LY+W   DD  +
Sbjct: 841  EPKVGRIIIYHYADGNLTQVSEKEIKGSCYSLVEFNGRVLASINSTVRLYEWT--DD--K 896

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
            +L+ EC H  ++LALY +T+GDFI+VGDLM+SI+LL YK  EG+ EE ARDY  NWM+AV
Sbjct: 897  DLRLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAV 956

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 976
            EILDDD +LGA+N+ NLF   K+    TD+ER ++  V + HLG+ VN FRHGSLVM   
Sbjct: 957  EILDDDAFLGADNSNNLFVCLKDGAATTDDERQQMPEVAQVHLGDMVNVFRHGSLVME-- 1014

Query: 977  DSDVGQ--IPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
              ++G+   PT   V+FGTV+G IG++  +P + Y FL KLQ NL   IK VG ++H  W
Sbjct: 1015 --NIGERTTPTSGCVLFGTVSGAIGLVTQIPADYYEFLRKLQENLTDTIKSVGKIDHAYW 1072

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---------SVEELCKRVE 1082
            RSF+ E KT   + F+DGDL+ESFLDLSR +M E +  + +         +V+++ K VE
Sbjct: 1073 RSFHTEMKTERCEGFIDGDLVESFLDLSREKMHEAALGLQIDVDGTKKEATVDDIIKIVE 1132

Query: 1083 ELTRLH 1088
            +LTR+H
Sbjct: 1133 DLTRIH 1138


>gi|380025901|ref|XP_003696702.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
            [Apis florea]
          Length = 1141

 Score = 1102 bits (2849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/1144 (49%), Positives = 773/1144 (67%), Gaps = 69/1144 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 7    HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAV 66

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   + E+ E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 67   VKFFRPPHEKKDLLFLLTTRYNAMILECIGEGENIEIITKAHGNVADRIGKASETGIKAV 126

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR+EE QV D+ FL+GCA PT+++++Q
Sbjct: 127  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEEHQVQDVNFLHGCANPTLILIHQ 186

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 187  D-INGRHVKTHEISLRDKEFVKIPWRQDNVEREAMIVIPVPSPICGAIIIGQESILYHDG 245

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
            N + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 246  NTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFVEQEKKTDGTQVVKDLKV 305

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+++GS  GDSQL+KL  + D  GSY   +E + NL PIVD 
Sbjct: 306  ELLGEISIPECITYLDNGVIFVGSRLGDSQLVKLITKADENGSYCVPMETFTNLAPIVDM 365

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+    + FD
Sbjct: 366  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIEEHASIDLPGIKGMWALKIGGGN-FD 424

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  S RL+S 
Sbjct: 425  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISY 483

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ + +EW+     +++V   N +QVL ATG   L YLEI  G +       L+YE++C
Sbjct: 484  ETKTVVSEWEPENKRTISVVACNGTQVLCATGN-DLFYLEISCGQILPKGFTTLQYEVAC 542

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+  N + ++IAAVG+WT ISV I +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 543  LDISPLDGN-TEAKIAAVGLWTHISVHILTLPALEEINKELLGGEIIPRSILMTCFEGNT 601

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F L+ + G L+D+KKV+LGTQP  LRTF S  TT+VFA SDRPTVIY
Sbjct: 602  YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLFTTNVFACSDRPTVIY 661

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 662  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 721

Query: 715  PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
            PRRI +QE S+TF + +++                                         
Sbjct: 722  PRRIAYQESSQTFGVITMRVDIQDSSGVSIVRHSASTQAASTSSSSHIASYNKPTGHTAS 781

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
               +E E+H + ++D  TFE +  + L   EY  S++S    +D   YY VGTA V P+E
Sbjct: 782  DICQEIEVHNLLIIDQHTFEVLHAHMLMPTEYALSLISTKLGEDPTSYYIVGTALVHPDE 841

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP  GRIL++   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       
Sbjct: 842  TEPKMGRILLYHWSDGKLTQVAEKEXKGSCYSLTEFNGKLLASINSTVRLFEWT----AE 897

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL+ EC H  +I+ALY++++GDFI+VGDLM+S++LL YK  EG  EE ARDYN NWM+A
Sbjct: 898  KELRLECSHFNNIIALYLKSKGDFILVGDLMRSLTLLQYKTMEGCFEEIARDYNPNWMTA 957

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            +EILDDD +LGAEN FNLF  +K+S   +++ER +++ VG++HLG+ VN FRHGSLVM+ 
Sbjct: 958  IEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQN 1017

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L +S       V+ GTV+G IG++  +P   Y FL  L+  L  VIK VG + H  WRSF
Sbjct: 1018 LGESSTPTQGCVLXGTVSGAIGLVTQIPFIFYEFLRNLEDRLTSVIKSVGKIEHNFWRSF 1077

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEEL 1084
            N E K    + F+DGDLIESFLDLS  +M E++  + +          +V++L K VE+L
Sbjct: 1078 NTELKIEQCEGFIDGDLIESFLDLSPDKMAEVASGLMIDDPSGMKKEATVDDLVKIVEDL 1137

Query: 1085 TRLH 1088
            TR+H
Sbjct: 1138 TRIH 1141


>gi|307205760|gb|EFN83990.1| DNA damage-binding protein 1 [Harpegnathos saltator]
          Length = 1138

 Score = 1100 bits (2844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/1144 (48%), Positives = 775/1144 (67%), Gaps = 69/1144 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT V     GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYGRIA 
Sbjct: 4    HYVVTAHKPTAVNACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGRIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   + E  E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 64   VKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIGKASETGIKAV 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR++E QV D+ FL+GCA PT+++++Q
Sbjct: 124  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E++L+DK+FV+ PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 184  D-INGRHVKTHEISLRDKEFVKIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
              + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 243  TTYIAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFLEQEKKPDGTQVVKDLKV 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+++GS  GDSQLIKL  + D  GSY   +E + NL PIVD 
Sbjct: 303  ELLGEISIPECITYLDNGVIFVGSRLGDSQLIKLITKADENGSYCVPMETFTNLAPIVDM 362

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+    + FD
Sbjct: 363  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALKVGGGN-FD 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  S RL+S 
Sbjct: 422  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISH 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ + +EW+     +++V   N +QVL ATG   L Y+EI    +     A L++E++C
Sbjct: 481  ETKIVVSEWEPENKRTISVVACNGTQVLCATGN-DLFYMEIICNQIVPKGFATLQHEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+ +  S ++I AVG+WTDISVRI +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 540  LDISPL-DGISEAKIVAVGLWTDISVRILTLPGLEEINKELLGGEIIPRSILMTCFEGNT 598

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F L+ + G L+D+KKV+LGTQP  LRTF S +TT+VFA SDRPTVIY
Sbjct: 599  YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY 658

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 659  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 718

Query: 715  PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
            PRRI +QE S+TF + +++                                         
Sbjct: 719  PRRIAYQESSQTFGVITMRVDVQESSGVSIVRHSASTQAASTSSSSHIASHNKPSGHTAS 778

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
               +E E+H + ++D  TFE +  + L   EY  S++S    +D   Y+ VGTA + P+E
Sbjct: 779  EIGQEIEVHNLLIIDQHTFEVLHAHTLMPTEYALSLISTRLGEDPTSYFVVGTALINPDE 838

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP  GRIL++   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       
Sbjct: 839  TEPKMGRILLYHWSDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWT----AE 894

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL+ EC H  +I+ALY++T+GDF++VGDLM+S++LL YK  EG+ EE ARDYN NWM++
Sbjct: 895  KELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTS 954

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            +EILDDD +LGAEN FNLF  +K+S   +++ER +++ VG++HLG+ VN FRHGSLVM+ 
Sbjct: 955  IEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQN 1014

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L +S    +  V+FGTV+G IG++  +P   Y FL  L+  L  VIK VG + H  WRSF
Sbjct: 1015 LGESSTPTLGCVLFGTVSGAIGLVTQIPFAFYEFLRNLEDRLNSVIKSVGKIEHNFWRSF 1074

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEEL 1084
            N E K    + F+DGDLIESFLDL+  +M E++  + +          +V++L K VE+L
Sbjct: 1075 NTELKIEQCEGFIDGDLIESFLDLNHDKMAEVAMGLMIDDGSGMKKEATVDDLVKVVEDL 1134

Query: 1085 TRLH 1088
            TR+H
Sbjct: 1135 TRIH 1138


>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
            DNA-binding protein 1) (UV-damaged DNA-binding factor)
            (DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
            (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
            pigmentosum group E-co... isoform 2 [Ciona intestinalis]
          Length = 1142

 Score = 1100 bits (2844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/1150 (50%), Positives = 762/1150 (66%), Gaps = 77/1150 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+VTAHKPT V     GNFTS  +LNL+I+K TR+E+  +TP+GL+P+ ++ IYGRIA 
Sbjct: 4    NYIVTAHKPTAVKQCITGNFTSGSDLNLLISKNTRLELFTVTPEGLRPVKEINIYGRIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            L+ FRP GE +D LFI TERY  C+LQ+ A     E+IT+A GD+SD +GRP + G IGI
Sbjct: 64   LKFFRPEGEDRDLLFILTERYHGCILQYKATDGGCEIITKASGDLSDTVGRPPETGIIGI 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  +LIGL LY+G+FK +P+D   +    FNIR+EEL V+D KFL+G   PT+V++YQ
Sbjct: 124  IDPTSKLIGLRLYEGVFKFLPYDPTSEELRPFNIRIEELSVIDAKFLHGYTTPTLVIIYQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
             N   RHVKTY V ++DK+ V GPW Q N+D  A+ +I VP PL G +IIG+E+I Y   
Sbjct: 184  -NSQGRHVKTYIVDVRDKEVVAGPWKQENIDAEANFIINVPKPLAGSIIIGQESITY--H 240

Query: 243  NAFKAIPIRP-----SITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTGL 292
            N  K IPI P          Y  VD DGSRYLLGD AG L +L++  ++       V  L
Sbjct: 241  NGDKYIPIAPLCFFQDTINCYAPVDKDGSRYLLGDLAGHLFILLLESDEMMDGTNTVRDL 300

Query: 293  KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIV 352
            KIELLGE SI   ISYLDN VVYIGS  GDSQLI+L+  P  +   + VL+ Y NLGPI+
Sbjct: 301  KIELLGEVSIPEAISYLDNGVVYIGSRLGDSQLIRLHTTP-VEVHLISVLDTYTNLGPII 359

Query: 353  DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS-STDD 411
            D CVVDL+RQGQGQVVTCSGA+K+GSLRI+RNGIGI E AS++L GIKG+W LR   T  
Sbjct: 360  DMCVVDLDRQGQGQVVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGLWPLRVFDTSR 419

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             +DT LV+SF+  +RIL ++ E E+EET++ GF  ++QT +C +  +NQLVQ+T  S+RL
Sbjct: 420  SYDT-LVISFVGHSRILQLSGE-EVEETDLPGFDDESQTFYCSNVCHNQLVQITEKSIRL 477

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            +S T R   +EWK      ++VAT N SQVLLA G   L Y EI  G + E     L +E
Sbjct: 478  ISHTERRQVHEWKPKNDRHISVATCNKSQVLLAIGSS-LHYFEIQPGEVIERACVDLPHE 536

Query: 532  ISCLDINPIGENPS--------YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR 583
            ++CL I P+  +PS         + I AVG+W D + R+  LP L  + ++ L  EIIPR
Sbjct: 537  VACLTIEPLVSDPSELEGPDFVTASICAVGLWNDNTARVLKLPTLEEMHQQKLADEIIPR 596

Query: 584  SVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
            S+LL  F+GI+YLL  LGDG L  F LN +TG ++DRKKV LGTQP +L  F+S  +  V
Sbjct: 597  SILLVQFDGINYLLVTLGDGTLFYFTLNPETGYISDRKKVPLGTQPTSLSVFTSGGSRTV 656

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 703
            FA SDRPTV+YSSNKKL++SNVNLKEVSHMCP +S  +PDSLA+A +  L IGTID+IQK
Sbjct: 657  FACSDRPTVVYSSNKKLVFSNVNLKEVSHMCPLDSDGYPDSLALANDNTLLIGTIDEIQK 716

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-AEESEMHFVR--------------- 747
            LHIR++PL E PRRI +QE+S+ F + +L+  S  A   +M   R               
Sbjct: 717  LHIRTVPLYESPRRIAYQEESQCFGLVTLRTDSVDATGDKMKITRPSASTQASVCTKSPP 776

Query: 748  -------------------LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGT 788
                               ++D  TFE    Y LDT E   SI+SC    D N Y+ VGT
Sbjct: 777  VDGRSVEGFSATADIGSLLIIDQHTFEVHHAYQLDTNEEPLSIMSCKLGSDPNSYFVVGT 836

Query: 789  AYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
            A+V  EE EP  GRILVF   D KL L+AEKE KGAV+ L  FNG +LAAIN  + +Y+W
Sbjct: 837  AFVYMEETEPKHGRILVFHYIDNKLTLVAEKEVKGAVFCLCQFNGHVLAAINTSVSIYQW 896

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
                   +EL++EC +  +ILALY++ +GDF++VGDLM+S+S+L YKH EG ++E A+DY
Sbjct: 897  TTE----KELRAECSNQSNILALYLKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDY 952

Query: 909  NANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH 968
            + NWM+AVEILDDD +LGAEN +N+F  +K+S   TDEER +L     +H+G+ +N FRH
Sbjct: 953  SPNWMTAVEILDDDNFLGAENFYNVFICQKDSGATTDEERSKLREAALFHVGDSINTFRH 1012

Query: 969  GSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
            GSLVM+ + ++ V     ++FGTV+G IGVI ++  + Y FL  +Q  L KVIK VG ++
Sbjct: 1013 GSLVMQNVGETAVSSKGHILFGTVHGSIGVITTVDEDLYAFLHSIQNRLAKVIKSVGNID 1072

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---------SVEELC 1078
            HE WRSF   +KT   + F+DGDLIE FLDL+R +M E++K + V         +V++L 
Sbjct: 1073 HESWRSFCTNEKTEAHRGFVDGDLIECFLDLNREKMAEVAKGLMVKEHGTKREATVDDLI 1132

Query: 1079 KRVEELTRLH 1088
            K VEE+ R+H
Sbjct: 1133 KAVEEMNRIH 1142


>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
            DNA-binding protein 1) (UV-damaged DNA-binding factor)
            (DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
            (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
            pigmentosum group E-co... isoform 1 [Ciona intestinalis]
          Length = 1150

 Score = 1099 bits (2843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1157 (50%), Positives = 765/1157 (66%), Gaps = 83/1157 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+VTAHKPT V     GNFTS  +LNL+I+K TR+E+  +TP+GL+P+ ++ IYGRIA 
Sbjct: 4    NYIVTAHKPTAVKQCITGNFTSGSDLNLLISKNTRLELFTVTPEGLRPVKEINIYGRIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            L+ FRP GE +D LFI TERY  C+LQ+ A     E+IT+A GD+SD +GRP + G IGI
Sbjct: 64   LKFFRPEGEDRDLLFILTERYHGCILQYKATDGGCEIITKASGDLSDTVGRPPETGIIGI 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  +LIGL LY+G+FK +P+D   +    FNIR+EEL V+D KFL+G   PT+V++YQ
Sbjct: 124  IDPTSKLIGLRLYEGVFKFLPYDPTSEELRPFNIRIEELSVIDAKFLHGYTTPTLVIIYQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
             N   RHVKTY V ++DK+ V GPW Q N+D  A+ +I VP PL G +IIG+E+I Y   
Sbjct: 184  -NSQGRHVKTYIVDVRDKEVVAGPWKQENIDAEANFIINVPKPLAGSIIIGQESITY--H 240

Query: 243  NAFKAIPIRPSITK----AYGRVDADGSRYLLGDHAGLLHLLVITHEK-----EKVTGLK 293
            N  K IPI P   K     Y  VD DGSRYLLGD AG L +L++  ++       V  LK
Sbjct: 241  NGDKYIPIAPPQIKDTINCYAPVDKDGSRYLLGDLAGHLFILLLESDEMMDGTNTVRDLK 300

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL----NLQPDAKGSYVEVLERYVNLG 349
            IELLGE SI   ISYLDN VVYIGS  GDSQLI+L    +++   K S + VL+ Y NLG
Sbjct: 301  IELLGEVSIPEAISYLDNGVVYIGSRLGDSQLIRLPTDSSMEGRPKPSLISVLDTYTNLG 360

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS-S 408
            PI+D CVVDL+RQGQGQVVTCSGA+K+GSLRI+RNGIGI E AS++L GIKG+W LR   
Sbjct: 361  PIIDMCVVDLDRQGQGQVVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGLWPLRVFD 420

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
            T   +DT LV+SF+  +RIL ++ E E+EET++ GF  ++QT +C +  +NQLVQ+T  S
Sbjct: 421  TSRSYDT-LVISFVGHSRILQLSGE-EVEETDLPGFDDESQTFYCSNVCHNQLVQITEKS 478

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL 528
            +RL+S T R   +EWK      ++VAT N SQVLLA G   L Y EI  G + E     L
Sbjct: 479  IRLISHTERRQVHEWKPKNDRHISVATCNKSQVLLAIGSS-LHYFEIQPGEVIERACVDL 537

Query: 529  EYEISCLDINPIGENPS--------YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
             +E++CL I P+  +PS         + I AVG+W D + R+  LP L  + ++ L  EI
Sbjct: 538  PHEVACLTIEPLVSDPSELEGPDFVTASICAVGLWNDNTARVLKLPTLEEMHQQKLADEI 597

Query: 581  IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            IPRS+LL  F+GI+YLL  LGDG L  F LN +TG ++DRKKV LGTQP +L  F+S  +
Sbjct: 598  IPRSILLVQFDGINYLLVTLGDGTLFYFTLNPETGYISDRKKVPLGTQPTSLSVFTSGGS 657

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              VFA SDRPTV+YSSNKKL++SNVNLKEVSHMCP +S  +PDSLA+A +  L IGTID+
Sbjct: 658  RTVFACSDRPTVVYSSNKKLVFSNVNLKEVSHMCPLDSDGYPDSLALANDNTLLIGTIDE 717

Query: 701  IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-AEESEMHFVR------------ 747
            IQKLHIR++PL E PRRI +QE+S+ F + +L+  S  A   +M   R            
Sbjct: 718  IQKLHIRTVPLYESPRRIAYQEESQCFGLVTLRTDSVDATGDKMKITRPSASTQASVCTK 777

Query: 748  ----------------------LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 785
                                  ++D  TFE    Y LDT E   SI+SC    D N Y+ 
Sbjct: 778  SPPVDGRSVEGFSATADIGSLLIIDQHTFEVHHAYQLDTNEEPLSIMSCKLGSDPNSYFV 837

Query: 786  VGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 845
            VGTA+V  EE EP  GRILVF   D KL L+AEKE KGAV+ L  FNG +LAAIN  + +
Sbjct: 838  VGTAFVYMEETEPKHGRILVFHYIDNKLTLVAEKEVKGAVFCLCQFNGHVLAAINTSVSI 897

Query: 846  YKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 905
            Y+W       +EL++EC +  +ILALY++ +GDF++VGDLM+S+S+L YKH EG ++E A
Sbjct: 898  YQWTTE----KELRAECSNQSNILALYLKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIA 953

Query: 906  RDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 965
            +DY+ NWM+AVEILDDD +LGAEN +N+F  +K+S   TDEER +L     +H+G+ +N 
Sbjct: 954  KDYSPNWMTAVEILDDDNFLGAENFYNVFICQKDSGATTDEERSKLREAALFHVGDSINT 1013

Query: 966  FRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 1024
            FRHGSLVM+ + ++ V     ++FGTV+G IGVI ++  + Y FL  +Q  L KVIK VG
Sbjct: 1014 FRHGSLVMQNVGETAVSSKGHILFGTVHGSIGVITTVDEDLYAFLHSIQNRLAKVIKSVG 1073

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV------------ 1072
             ++HE WRSF   +KT   + F+DGDLIE FLDL+R +M E++K + V            
Sbjct: 1074 NIDHESWRSFCTNEKTEAHRGFVDGDLIECFLDLNREKMAEVAKGLMVKNFNDQHGTKRE 1133

Query: 1073 -SVEELCKRVEELTRLH 1088
             +V++L K VEE+ R+H
Sbjct: 1134 ATVDDLIKAVEEMNRIH 1150


>gi|159489018|ref|XP_001702494.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
            reinhardtii]
 gi|158280516|gb|EDP06273.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
            reinhardtii]
          Length = 1147

 Score = 1098 bits (2840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/1136 (49%), Positives = 763/1136 (67%), Gaps = 85/1136 (7%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ------PMLDVP 57
            +NYVVTAHKPT VT S V NFT P ++NLI A CTR+EI  L  QGL        +LDVP
Sbjct: 16   YNYVVTAHKPTAVTQSVVANFTGPNDINLITACCTRLEIRTLGAQGLYVCVCVYAVLDVP 75

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
            IYG +++L+ FRP     D LFI TE+YKFCVLQ+D+   +L+TR+ GDV+DR GRPTDN
Sbjct: 76   IYGNVSSLQAFRPRDLQTDLLFILTEKYKFCVLQYDSAKGQLVTRSNGDVADRTGRPTDN 135

Query: 118  GQIGIIDPDCRLIGLHLYDGLFKVIPFDNK-GQLKEAFNIRLEELQVLDIKFLYGCAK-- 174
            GQ+G +DP CR+IGLHLYDG+ KVIP D + G L EA+N+RLEEL VLD+ +L   +K  
Sbjct: 136  GQLGFVDPACRVIGLHLYDGMLKVIPMDERTGALSEAYNVRLEELCVLDMAWLAPTSKGS 195

Query: 175  ---------------PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
                           P + VL+QD K ARHVKTYE AL  K+ VEGPW Q ++D GA +L
Sbjct: 196  AAGPSGSSAAAASGRPLLCVLHQDPKGARHVKTYEAALAAKELVEGPWQQQHVDAGAGIL 255

Query: 220  IPVPPPLCGVLIIGEETIVYCSANAFK-------AIPIRPSITKAYGRVDADGSRYLLGD 272
            IPVP PL GV+++GE  + YC             + P+R +I  A+  VD DGSRYLLGD
Sbjct: 256  IPVPAPLGGVVVVGENVLSYCGGPGAGPGGGAPVSAPLRQTIITAWCPVDPDGSRYLLGD 315

Query: 273  HAGLLHLLVITHEKE-KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQ 331
              G LHLLV+ H+   +V+GL++E LG TS  S +SYLD+ + ++GS  GD QL++++  
Sbjct: 316  RLGGLHLLVLAHDGAGRVSGLRVEPLGHTSTPSCLSYLDSGLTFVGSRSGDCQLVRISPT 375

Query: 332  P-DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
            P +   SYVE+++ + NLGPI+DF V+DLERQGQGQ+VTCSG   DGSLR++RNGIGIN 
Sbjct: 376  PVNQPPSYVELVDSFPNLGPILDFVVMDLERQGQGQLVTCSGVDGDGSLRVIRNGIGINR 435

Query: 391  QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 450
            QA+VEL GIKG+WSLR+   D  D +LV++F+ ETR+LA+N E+EL+E EI GF +  QT
Sbjct: 436  QATVELAGIKGVWSLRAHYGDEHDAYLVLTFVGETRLLALNAEEELDEAEIPGFDAAAQT 495

Query: 451  LFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 510
            L+C +   + L+QVTS SVRLV S+S  L +EW+ P G+S+NVA  + +QV++ATGGGHL
Sbjct: 496  LWCGNTACDHLLQVTSSSVRLVDSSSLALVSEWRPPAGFSINVAAGSPTQVVVATGGGHL 555

Query: 511  VYLEI----GDGILTEVKHAQLEYEISCLDINPI------GENPSYSQIAAVGMWTDISV 560
            VYLE+    G   + EV +  L+ E++C+D++P+      G +   S + AVG W D ++
Sbjct: 556  VYLEVQAQAGGAAVVEVANVTLDSEVACVDVSPLLLTAGPGGSAERSGLVAVGRW-DQTL 614

Query: 561  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 620
            ++ ++P L  ++   LGGE+IPRSVL    EG+ Y +  LGDG L  + L   TG LTDR
Sbjct: 615  QLLAVPGLTPLSVTPLGGEVIPRSVLCVGLEGVPYCMVGLGDGALHTWRLEPATGALTDR 674

Query: 621  KKVSLGTQPITLRTFSS-------------------KNTTHVFAASDRPTVIYSSNKKLL 661
            K+V LGT+PITLRTF +                        VFAASDRPTV+YSSN+KL+
Sbjct: 675  KRVVLGTKPITLRTFRTAAAAAAAAGGDNGGARGGGGGGVSVFAASDRPTVVYSSNRKLM 734

Query: 662  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 721
            YSN+N  +V+H+  F++AAFP SLA+A E  LTIGT D +QKLH+R++ LGE PRRI H 
Sbjct: 735  YSNLNENDVAHLSSFHAAAFPHSLAVASEAALTIGTADQLQKLHVRTVVLGEQPRRIAHH 794

Query: 722  EQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 781
            E  R   + + ++    E  ++   RLLDD TF+ +++Y L   E  C   + + S    
Sbjct: 795  EAGRLLGVLTQRDPDGEERGQL---RLLDDTTFDVVASYGLAPGEMPCGGSASAASAAGP 851

Query: 782  VYYCVGTAYVLPEENEPTKGRILVF----------IVEDGKLQLIAEKETKGAVYSLNAF 831
              + VGT  + P+E EP++GRILV               G ++L+ EKE KGA Y++  F
Sbjct: 852  ATFIVGTVLLRPDEPEPSRGRILVLEYLPGGAGGAAAGGGAVRLVTEKEVKGAAYNVRPF 911

Query: 832  NG-KLLAAINQKIQLYKWMLRDDGTR-------ELQSECGHHGHILALYVQTRGDFIVVG 883
             G K+LA++N K+ +Y+W++R+           EL SEC H G++LALY+  RG  +VVG
Sbjct: 912  AGDKILASVNNKVTVYRWVVREGSGGPGGCGAYELASECHHLGNVLALYLAARGGLVVVG 971

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 943
            DLM+S+SLL Y  E+G +E RA DYN+ W +AVEILDDD Y+ A+N+ NL+ VR+N++ A
Sbjct: 972  DLMRSVSLLSYNAEQGVLEHRAADYNSGWTTAVEILDDDNYIAADNHCNLYVVRRNADSA 1031

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD-VGQIPTVIFGTVNGVIGVIASLP 1002
            TDEER RL+VVGE+H G F+N+ R+GSLVMRLPDS+  G  P ++F   +G +GV+A LP
Sbjct: 1032 TDEERARLQVVGEFHTGTFINQMRNGSLVMRLPDSEHAGLPPPLLFAGTDGRLGVVARLP 1091

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
               Y +  KLQT +R V++GVGGL+HEQWR+F N+++  +A+ F+DGDLIES LDL
Sbjct: 1092 PALYEWATKLQTAMRSVVRGVGGLDHEQWRAFANDRRCGEARGFVDGDLIESLLDL 1147


>gi|332030156|gb|EGI69950.1| DNA damage-binding protein 1 [Acromyrmex echinatior]
          Length = 1138

 Score = 1097 bits (2837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/1144 (48%), Positives = 777/1144 (67%), Gaps = 69/1144 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+I+ 
Sbjct: 4    HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKISV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T RY   +L+   + E  E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 64   IKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIGKASETGIKAV 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR++E QV D+ FL+GCA PT+++++Q
Sbjct: 124  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E+ L+DK+F + PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 184  D-INGRHVKTHEINLRDKEFAKIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
              + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 243  TTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFLEQEKKPDGSQVVKDLKV 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+Y+GS  GDSQLIKL  + D  GSY   +E + NL PIVD 
Sbjct: 303  ELLGEISIPECITYLDNGVIYVGSRLGDSQLIKLITKADENGSYCVPMETFTNLAPIVDM 362

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+      FD
Sbjct: 363  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASMDLPGIKGMWALKVGGSH-FD 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+TS SVRL+S 
Sbjct: 422  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTDDLFIQITSTSVRLISH 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ + +EW+     +++V   N +QVL ATG   L Y+EI    +       L++E++C
Sbjct: 481  ENKIVVSEWEPQNKRTISVVACNGTQVLCATGN-DLFYIEIICNQIVSKGFVTLQHEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+ +  + ++I AVG+WTDISVRI +LP+L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 540  LDISPL-DGVNEAKIVAVGLWTDISVRILTLPNLEEINKELLGGEIIPRSILMTCFEGNT 598

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+L+ ++G L+D+KKV+LGTQP  LRTF S +TT+VFA SDRPTVIY
Sbjct: 599  YLLCALGDGSMYYFILHRQSGMLSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY 658

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 659  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 718

Query: 715  PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
            PRRI +QE S+TF + +++                                         
Sbjct: 719  PRRIAYQESSQTFGVITMRVDVQESSGVSIVRHSASTQAASTSSSSHVVSHNKPSGHTAS 778

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
               +E E+H + ++D  TFE +  + L   EY  S++S    +D   Y+ VGTA++ P+E
Sbjct: 779  EIGQEIEVHNLLIIDQHTFEVLHAHTLMATEYALSLISTKLGEDPTSYFVVGTAFINPDE 838

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP  GRIL++   +GK   +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       
Sbjct: 839  TEPKMGRILLYHWSEGKFTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWT----AE 894

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL+ EC H  +I+ALY++T+GDF++VGDLM+S++LL YK  EG+ EE ARDYN NWM++
Sbjct: 895  KELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTS 954

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            +EILDDD +LGAEN FNLF  +K+S   +++ER +++ +G++HLG+ VN FRHGSLVM+ 
Sbjct: 955  IEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEIGQFHLGDMVNVFRHGSLVMQN 1014

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L +S    +  V+FGTV+G IG++  +P   Y FL  ++  L  VIK VG + H  WRSF
Sbjct: 1015 LGESSTPTLGCVLFGTVSGAIGLVTQIPVTFYEFLRNMEDRLNSVIKSVGKIEHNFWRSF 1074

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEEL 1084
            N E K    + F+DGDLIESFLDL+  +M E++  + +          +V++L K VE+L
Sbjct: 1075 NTELKIEQCEGFIDGDLIESFLDLNHDKMAEVAMGLMIDDGSGMKKEATVDDLVKIVEDL 1134

Query: 1085 TRLH 1088
            TR+H
Sbjct: 1135 TRIH 1138


>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
            anatinus]
          Length = 1045

 Score = 1095 bits (2833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/1040 (52%), Positives = 726/1040 (69%), Gaps = 65/1040 (6%)

Query: 107  VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDI 166
            + DRIGRP++ G IGIIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEELQV+D+
Sbjct: 13   LKDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDV 72

Query: 167  KFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPL 226
            KFLYGC  PTI  +YQD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P 
Sbjct: 73   KFLYGCQAPTICFVYQDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPF 131

Query: 227  CGVLIIGEETIVYCSANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVIT 283
             G +IIG+E+I Y + + + AI    I+ S    + RVD +GSRYLLGD  G L +L++ 
Sbjct: 132  GGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLE 191

Query: 284  HEKE-----KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSY 338
             E++      +  L++ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSY
Sbjct: 192  KEEQMDGAVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSY 251

Query: 339  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 398
            V  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L G
Sbjct: 252  VVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG 311

Query: 399  IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 458
            IKG+W LRS+++   D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  +
Sbjct: 312  IKGLWPLRSNSNRETDDTLVLSFVGQTRVLMLNGE-EVEETELTGFVDNQQTFFCGNVAH 370

Query: 459  NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG 518
             QL+Q+TS SVRLV+   + L +EWK P G +++VA+ N+SQV++A G   L YL+I   
Sbjct: 371  QQLIQITSASVRLVTQEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPR 429

Query: 519  ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 578
             L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGG
Sbjct: 430  ELRQISHTEMEHEVACLDITPLGDSHGMSPLCAIGLWTDISARILKLPSFELLHKEMLGG 489

Query: 579  EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            EIIPRS+L+  FE   YLLCALGDG L  F L+++TG L+DRKKV+LGTQP  LRTF S 
Sbjct: 490  EIIPRSILMTTFESSHYLLCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSL 549

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTI
Sbjct: 550  STTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTI 609

Query: 699  DDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------------------------- 733
            D+IQKLHIR++PL E PR+IC+QE S+ F + S +                         
Sbjct: 610  DEIQKLHIRTVPLYESPRKICYQEGSQCFGVLSSRIEVQDASGGTTALRPSGSTQALSSS 669

Query: 734  --------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
                            S  EE E+H + ++D  TFE +  +     EY  S++SC    D
Sbjct: 670  VSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKD 729

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+I
Sbjct: 730  ANTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASI 789

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            N  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG
Sbjct: 790  NSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG 845

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
              EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HL
Sbjct: 846  NFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL 905

Query: 960  GEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            GEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L K
Sbjct: 906  GEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNK 965

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV------ 1072
            VIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   + +      
Sbjct: 966  VIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGM 1025

Query: 1073 ----SVEELCKRVEELTRLH 1088
                +V++L K VEELTR+H
Sbjct: 1026 KREATVDDLIKIVEELTRIH 1045


>gi|307186138|gb|EFN71863.1| DNA damage-binding protein 1 [Camponotus floridanus]
          Length = 1136

 Score = 1092 bits (2823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 556/1142 (48%), Positives = 769/1142 (67%), Gaps = 67/1142 (5%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y+VTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 4    HYIVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP  E +D LF+ T  Y   +L+   + E  E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 64   IKFFRPPHEKKDLLFLLTTSYNAMILECMGEGEDIEIITKAHGNVADRIGKASETGIKAV 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D      +A +IR++E QV D+ FL+GC  PT+++++Q
Sbjct: 124  IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFLHGCTNPTLILIHQ 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D  + RHVKT+E+ L++K+F + PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 184  D-INGRHVKTHEINLREKEFSKIPWRQDNVEREAMMVIPVPSPICGAIIIGQESILYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-----VTGLKI 294
              + A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 243  TTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFLELEKKPDGTQVVKDLKV 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGE SI   I+YLDN V+Y+GS  GDSQLIKL  + D  GSY   +E + NL PIVD 
Sbjct: 303  ELLGEISIPECITYLDNGVIYVGSRLGDSQLIKLITKADENGSYCVPMETFTNLAPIVDM 362

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+    + FD
Sbjct: 363  AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALKVGGGN-FD 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  S RL+S 
Sbjct: 422  NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLISH 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             S+ + +EW+     +++V   N +QVL ATG   L Y+EI    +     A L++E++C
Sbjct: 481  ESKMVVSEWEPQNKRTISVVACNGTQVLCATGN-DLFYMEISCNQIVPKGFATLQHEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI+P+ +  + ++I AVG+WTDISVRI +LP L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 540  LDISPL-DGVNEAKIVAVGLWTDISVRILTLPGLEEINKELLGGEIIPRSILMTCFEGNT 598

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F L  + G L+D+K+V+LGTQP  LRTF S +TT+VFA SDRPTVIY
Sbjct: 599  YLLCALGDGSMYYFTLYKQNGVLSDKKRVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY 658

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 659  SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 718

Query: 715  PRRICHQEQSRTFAICSLK-------------------------------------NQSC 737
            PRRI +QE S+TF + +++                                         
Sbjct: 719  PRRIAYQESSQTFGVITMRVDVQESSGVSIVRHSASTQAASLSSGIASHNKPSGHTASEI 778

Query: 738  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE 797
             +E E+H + ++D  TFE +  + L   EY  S++S    +DS  YY VGTA++ P+E E
Sbjct: 779  GQEIEVHNLLIIDQHTFEVLHAHTLMPTEYALSLISTRLGEDSTSYYVVGTAFINPDETE 838

Query: 798  PTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRE 857
            P  GRIL+F   DGKL  +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       +E
Sbjct: 839  PKMGRILLFHWSDGKLSQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWT----AEKE 894

Query: 858  LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
            L+ EC H  +I+ALY++T+ DF++VGDLM+S++LL YK  EG+ EE ARDYN NWM+++E
Sbjct: 895  LRLECSHFNNIIALYLKTKSDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIE 954

Query: 918  ILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LP 976
            ILDDD +LGAEN FNLF  +K+S   +++ER +++ VG++HLG+ VN FRHGSLVM+ L 
Sbjct: 955  ILDDDTFLGAENCFNLFICQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLG 1014

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN 1036
            +S       V+FGTV+G IG++  +P   Y FL  L+  L  VIK VG + H  WRSF  
Sbjct: 1015 ESSTPTQGCVLFGTVSGAIGLVTQIPFGFYEFLRNLEDKLTSVIKSVGKIEHNFWRSFKT 1074

Query: 1037 EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTR 1086
            + K    + F+DGDLIESFLDLS  +M E++  +            +V++L K VE+LTR
Sbjct: 1075 DLKIEQCEGFIDGDLIESFLDLSHDKMAEVAMGLMMDDGSGMKKEATVDDLVKIVEDLTR 1134

Query: 1087 LH 1088
            +H
Sbjct: 1135 IH 1136


>gi|449519304|ref|XP_004166675.1| PREDICTED: DNA damage-binding protein 1a-like [Cucumis sativus]
          Length = 596

 Score = 1091 bits (2821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/593 (88%), Positives = 562/593 (94%), Gaps = 5/593 (0%)

Query: 501  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 560
            VLLATGGG LV+LEI DG+L E KH QLE+EISCLDINPIG+NP+ SQ+AAVGMWTDISV
Sbjct: 4    VLLATGGGVLVHLEICDGLLVEKKHIQLEHEISCLDINPIGDNPNCSQLAAVGMWTDISV 63

Query: 561  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTG----E 616
            RIFSLPDLNL+TKE LGGEIIPRSVLLC FEG+ + LCALGDGHLLNF+LN  +     E
Sbjct: 64   RIFSLPDLNLLTKEQLGGEIIPRSVLLCTFEGVCFCLCALGDGHLLNFILNTNSNSNSCE 123

Query: 617  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
            L DRKKVSLGTQPITLRTFSSKN THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF
Sbjct: 124  LMDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 183

Query: 677  NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQ 735
            NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSL+ NQ
Sbjct: 184  NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLRYNQ 243

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
            S  E++EMHF+RLLDDQTFE ISTY LDT+EYGCSILSCSFSDD+NVYYCVGTAYV+PEE
Sbjct: 244  SGTEDTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCSFSDDNNVYYCVGTAYVMPEE 303

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
            NEPTKGRILVF+VE+GKLQLIAEKETKG+VYSLNAFNGKLLAAINQKIQLYKW LRDDGT
Sbjct: 304  NEPTKGRILVFVVEEGKLQLIAEKETKGSVYSLNAFNGKLLAAINQKIQLYKWTLRDDGT 363

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA
Sbjct: 364  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 423

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL 975
            VEILDDDIYLGAEN FNLFTVRKNSEGATDEER RLEVVGEYHLGEFVNRF+HGSLVMRL
Sbjct: 424  VEILDDDIYLGAENYFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFQHGSLVMRL 483

Query: 976  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
            PDSDVGQIPTVIFG+VNGVIGVIASLPH+QY+FLE+LQ+NLRKVIKGVGGL+HEQWRSFN
Sbjct: 484  PDSDVGQIPTVIFGSVNGVIGVIASLPHDQYVFLERLQSNLRKVIKGVGGLSHEQWRSFN 543

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            NEK+T +AKNFLDGDLIESFLDL+R++M+EIS+ M+VS EELCKRVEELTRLH
Sbjct: 544  NEKRTAEAKNFLDGDLIESFLDLNRSKMEEISRAMSVSAEELCKRVEELTRLH 596


>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
          Length = 1156

 Score = 1085 bits (2807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/1159 (47%), Positives = 779/1159 (67%), Gaps = 85/1159 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y VTAHKPT V  S   NFTSP + NL++A+  RI+I L+T +GLQP+ ++ +YG+I  +
Sbjct: 7    YTVTAHKPTAVVTSISANFTSPTDRNLLVARFNRIDISLVTEEGLQPIKEIALYGKIEIM 66

Query: 66   ELFRPHGEAQDFLFIATERYKFCVL---QWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++FRP  + +D LF+ T RY   +L   Q ++   ++IT+A G++SD+IG+ ++ G + +
Sbjct: 67   KVFRPKHKDKDLLFVVTARYNTMILECVQTESGDIDIITKAHGNISDQIGKISEIGAMAV 126

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IGL LYDGLFK+IP D +G+LK A+ +R+EE++V DI FLYGCA PTI++++Q
Sbjct: 127  IDPSARVIGLKLYDGLFKIIPLDKEGELK-AYCLRMEEVEVQDIDFLYGCANPTIIIIHQ 185

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D    RH+K  E+++KDK+FV+ PW Q N++  A ++IPVP PLCG +IIG E+++Y + 
Sbjct: 186  DTM-GRHIKAKELSIKDKEFVKTPWKQENVETEASMIIPVPEPLCGAIIIGRESVLYHNG 244

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKI 294
            ++F AI    I+ S    Y R+D +G+RYLLGD AG L +L++ +EK      K+   K+
Sbjct: 245  SSFIAISPPVIKQSTIVCYARIDPEGTRYLLGDMAGHLFMLLLNYEKNPDGTFKIKDPKV 304

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            +LLGE SI  +++YLDN ++Y+ S  GDSQLIKLN +PD  GS++ VL+ ++NLGPIVD 
Sbjct: 305  DLLGEISIPESLTYLDNKIIYVASRVGDSQLIKLNKKPDQFGSHITVLDTFMNLGPIVDM 364

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
            CV+DLERQGQGQVVTCSGAYK+GSLRI+RNGIGI E A+++L GIKGMW LR +TD   D
Sbjct: 365  CVIDLERQGQGQVVTCSGAYKEGSLRIIRNGIGIQEVATIDLVGIKGMWPLRITTDSLLD 424

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV+SF+  +R+LA + E E+EE ++EGF S+ QT +C +   N++VQ+TS SVRL+  
Sbjct: 425  DTLVLSFVGHSRVLAYSGE-EVEEIDLEGFQSELQTFYCGNTSDNKMVQITSASVRLICL 483

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             S+ L +EW  P G S+NV + N  Q + ATG   L Y+EIG   + +     LE+E+SC
Sbjct: 484  ESKCLVSEWNVPDGKSINVVSCNGHQAVCATGNS-LYYIEIGTDKVDQKGFITLEHEVSC 542

Query: 535  LDINPIGENPSY--SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            LD+    +N  Y  S + AVG+W DISV+I  LPD   + +E LG EIIPRS+L+  FE 
Sbjct: 543  LDVCSF-KNEFYKNSSLVAVGLWMDISVKILQLPDFVELVREPLGEEIIPRSILMVTFEN 601

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
            I YLLCALGDG L  F LN + G L+D++KV+LGTQP  +R F S  TT VFA SD PTV
Sbjct: 602  IDYLLCALGDGSLCYFHLNPENGVLSDKRKVNLGTQPTLIRKFQSLATTSVFACSDHPTV 661

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            IYSSN KL++SNVNL++V+HMC  N+ ++PDSLA+A +  + IGTID++QKLHIR+IPLG
Sbjct: 662  IYSSNNKLIFSNVNLRKVNHMCSLNTKSYPDSLAMATDTAIIIGTIDEMQKLHIRTIPLG 721

Query: 713  EHPRRICHQEQSRTFAICSLK---------------------------------NQSCAE 739
            E PRRI HQE S++F I +++                                 N S   
Sbjct: 722  EAPRRIAHQESSKSFGIITMRIDVHEGINLVPARPSASTSAQNISGAINNRMPNNASAVN 781

Query: 740  ------------ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG 787
                        E E+H + +LD  TFE +  + L++ EY  SI+S    DD   YY +G
Sbjct: 782  SNQGPLSSEYGLEVEIHNMLVLDQNTFEVLHAHQLNSNEYALSIISAKLGDDPATYYILG 841

Query: 788  TAYVLPEENEPTKGRILVFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 845
            TA V PE+ +P  GRIL+F  +D   KL  I EKE KGA Y +  FNGKLLAA+N  ++L
Sbjct: 842  TAVVNPEDQDPKLGRILIFHWDDSSSKLTPITEKEVKGACYGMAEFNGKLLAAVNCTVRL 901

Query: 846  YKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 905
            ++W       +EL+ EC H  +I+AL+V+T+GDFIV GDLM+S++LL YK  EG+ EE A
Sbjct: 902  FEWT----AEKELRLECSHFNNIVALFVKTKGDFIVCGDLMRSLTLLQYKTMEGSFEEIA 957

Query: 906  RDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 965
            RDYN  W +A+EI+DDD++LGAEN+ NLF + K+S   +DE R +L+ +G++H G+ +N 
Sbjct: 958  RDYNPKWSTAIEIIDDDVFLGAENDKNLFIIHKDSTLTSDEARHQLQEIGQFHCGDLINV 1017

Query: 966  FRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 1024
            FRHGSLVM+   D+ V     +++GT +G +G++  L  + + FL  L+ +L  V+KGVG
Sbjct: 1018 FRHGSLVMQHFTDTYVSVQGGILYGTCSGALGLVTQLTPKMFDFLSDLEKSLATVVKGVG 1077

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM---------------DEISKT 1069
             +NH+ WRS++ E +T  +++F+DGDLIESFLDLS+  M                +I K 
Sbjct: 1078 KINHQFWRSYHTEIRTEPSESFVDGDLIESFLDLSKREMIAVVDALQGAYDHEFKKIPKD 1137

Query: 1070 MNVSVEELCKRVEELTRLH 1088
              +S++++ K VE+LTR+H
Sbjct: 1138 TKISLDDVIKLVEDLTRIH 1156


>gi|432089478|gb|ELK23419.1| DNA damage-binding protein 1 [Myotis davidii]
          Length = 1047

 Score = 1065 bits (2754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/993 (53%), Positives = 701/993 (70%), Gaps = 56/993 (5%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
           +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
            +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63  VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
           IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123 IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182 QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
           QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183 QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242 ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
            + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242 GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
           +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302 VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354 FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
            CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362 MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPTRET 421

Query: 414 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
           D  LV+SF+ +TR+L +N E E+EETE+ GF  + QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422 DDTLVLSFVGQTRVLMLNGE-EVEETELTGFVDEQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474 STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              + L +EWK P G +++VA+ N+SQV++A G   L  L+I    L ++ H ++E+E++
Sbjct: 481 QDPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYCLQIHPQELRQISHTEMEHEVA 539

Query: 534 CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
           CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540 CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
            YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600 HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
           YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660 YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714 HPRRICHQEQSRTFAICSLK---------------------------------------N 734
            PR+IC+QE S+ F + S +                                        
Sbjct: 720 SPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735 QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
            S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780 TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795 ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
           E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840 EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----A 895

Query: 855 TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
            +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 896 EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915 AVEILDDDIYLGAENNFNLFTVRKNSEGATDEE 947
           AVEILDDD +LGAEN FNLF  +K+    T+ +
Sbjct: 956 AVEILDDDNFLGAENAFNLFVCQKDRSFHTERK 988



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 10/67 (14%)

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRV 1081
            RSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K V
Sbjct: 981  RSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVV 1040

Query: 1082 EELTRLH 1088
            EELTR+H
Sbjct: 1041 EELTRIH 1047


>gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus]
          Length = 994

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/986 (53%), Positives = 698/986 (70%), Gaps = 56/986 (5%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
           +NYVVTA KPT V     G+FTS +++NL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3   YNYVVTAQKPTAVNGCVTGHFTSAEDINLLIAKNTRLEIYVVTTEGLRPVKEVGMYGKIA 62

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
            +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63  VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
           IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123 IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182 QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
           QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183 QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242 ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
            + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242 GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
           +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302 VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354 FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
            CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   
Sbjct: 362 MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRET 421

Query: 414 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
           D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422 DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474 STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481 QEPKALVSEWKEPRAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534 CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
           CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540 CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
            YLLCALGDG L  F LN++TG L+DRKK++LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600 HYLLCALGDGALFYFGLNIETGLLSDRKKMTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
           YSSN KL++SNVN KEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660 YSSNHKLVFSNVNFKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714 HPRRICHQEQSRTFAICSLK---------------------------------------N 734
            PR+IC+QE S+ F + S +                                        
Sbjct: 720 SPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735 QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
            S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780 TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795 ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
           E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840 EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855 TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
            +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897 -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915 AVEILDDDIYLGAENNFNLFTVRKNS 940
           AVEILDDD +LGAEN FNLF  +K+S
Sbjct: 956 AVEILDDDNFLGAENAFNLFVCQKDS 981


>gi|357623954|gb|EHJ74904.1| putative DNA repair protein xp-e [Danaus plexippus]
          Length = 1128

 Score = 1061 bits (2743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/1139 (47%), Positives = 759/1139 (66%), Gaps = 67/1139 (5%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            ++YVVTA KPT V     GNFTSP +LNL++AK +R+E++L+TP+GL+PM +V +YGR+A
Sbjct: 3    YHYVVTAQKPTAVISCITGNFTSPTDLNLLVAKVSRLEMYLVTPEGLRPMKEVGLYGRVA 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQI 120
             ++LFRP  E +D +FI T RY   +L+W   ++   E++TRA G+V+DRIG+P++NG +
Sbjct: 63   KMKLFRPPYEQKDLVFILTARYNAMILEWRTGANGELEVVTRAHGNVADRIGKPSENGIL 122

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
             +IDP  R+IGL LYDGLFK+IP D      +A ++RLEEL V D++FL+GC+ PT++++
Sbjct: 123  AVIDPQARVIGLRLYDGLFKIIPLDKDSTELKAASLRLEELNVYDLEFLHGCSNPTLILI 182

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            +QD  + RH+KT+E+ L+DK+F++ PW Q+N++  A +LIPVP PL G ++IG+E+IVY 
Sbjct: 183  HQD-LNGRHIKTHEINLRDKEFMKIPWKQDNVETEASILIPVPSPLGGAIVIGQESIVYH 241

Query: 241  SANAFKAI--PIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE----KVTGLKI 294
               ++ A+  P   +    Y RVD  G RYLLGD AG L +L++   +      V  LK+
Sbjct: 242  DGQSYVAVAPPQIKTPINCYCRVDVRGLRYLLGDIAGRLFMLLLELSERDGTASVRDLKV 301

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLG+  I   ++YLDN VV++GS  GDS L++L    D    YV+ +E + +L PIVD 
Sbjct: 302  ELLGDIPIPECMTYLDNGVVFVGSRLGDSALVRLAAVRDDASQYVQPMETFTSLAPIVDM 361

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
            CVVDLERQGQ Q++TCSGA+K GSLRI+RNGIGI EQAS++L GIKGMW+L        D
Sbjct: 362  CVVDLERQGQNQLITCSGAFKMGSLRIIRNGIGIQEQASIDLPGIKGMWALTLGQGPHHD 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
            T LV+SF+ +TR+L +N E E+EETEI+GF S  QT F  +  ++QL+QVT   +RL+  
Sbjct: 422  T-LVLSFVGQTRVLTLNGE-EVEETEIKGFVSDRQTFFTGNVCHDQLIQVTDEGIRLIGR 479

Query: 475  TSRELRN--EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 532
                      W +P G +V+V +   ++ + A  G  +  + I  G L  +    +  E+
Sbjct: 480  GPGGWNGVAAW-APAGRAVSVVSCGETRAV-AAAGLRIYLVAIKQGALELISEVCMNEEV 537

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
            +CLD+ P GE      +  VG+WTDISVR+  LPDL  +  E L GEIIPRS+L+C  EG
Sbjct: 538  ACLDLGPGGEE----ALLGVGLWTDISVRVLKLPDLRPLHTEKLSGEIIPRSLLICVLEG 593

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
            + YLLCALGDG +  F ++  +G LT++KKV+LGTQP  LR+F S +TT++FA SDRPTV
Sbjct: 594  VCYLLCALGDGSMFYFTVDPDSGVLTNKKKVTLGTQPTVLRSFRSLSTTNIFACSDRPTV 653

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            I+SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  +TIGTID+IQKLHIR++PLG
Sbjct: 654  IFSSNHKLVFSNVNLKEVAHMCSLNAVAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLG 713

Query: 713  EHPRRICHQEQSRTFAICSL---------------------------------KNQSCAE 739
            E PRRI +QE S+TF + ++                                 K+     
Sbjct: 714  ETPRRIAYQEASQTFGVITMRVDKVEWTGGCGSLVRPSASTAAASASAAAPPSKHAPAPL 773

Query: 740  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT 799
            + E+H + +LD  TFE +  + L   E+  S++SC  +DD N YY VGTA + PEE+EP 
Sbjct: 774  DLELHNLLILDHHTFEVLHAHQLLANEFAMSLVSCKLADDPNHYYAVGTAILNPEESEPK 833

Query: 800  KGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
            +GRIL+F   +GKL  +AEKE KG  Y+L  FNGKLLA+IN  ++L++W       +EL+
Sbjct: 834  QGRILLFHWCEGKLTQVAEKEIKGGCYTLVEFNGKLLASINSTVRLFEWT----SEKELR 889

Query: 860  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
             EC H  +I+ALY++ +GDFI+VGDLM+S+SLL YK  EG+ EE ARDY+ NWM+AVEIL
Sbjct: 890  LECSHFNNIVALYLKVKGDFILVGDLMRSMSLLQYKQMEGSFEEIARDYSPNWMTAVEIL 949

Query: 920  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
            DDD +LGAEN+FNLF  +K+S   TDEER ++  +G++H+G+ VN  R G+LV +L D+ 
Sbjct: 950  DDDTFLGAENSFNLFVCQKDSAATTDEERQQMGYMGQFHVGDMVNVMRRGALVAQLADTA 1009

Query: 980  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
                  V+  TV+G I ++  L  E + FL +L+  L   IK VG + H  WRSFN + K
Sbjct: 1010 APVARPVLLATVSGAICLVVQLSQELFDFLHQLEERLTHTIKSVGKIPHSFWRSFNTDIK 1069

Query: 1040 TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 1088
            T  A+ F+DGDLIESFLDLSR    E  + + +          +V++L K VE+LTR+H
Sbjct: 1070 TEPAEGFIDGDLIESFLDLSRDMQQETLQGLQIDDGGGMMRDATVDDLIKIVEDLTRIH 1128


>gi|148709424|gb|EDL41370.1| damage specific DNA binding protein 1 [Mus musculus]
          Length = 968

 Score = 1049 bits (2712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/973 (53%), Positives = 688/973 (70%), Gaps = 56/973 (5%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
           +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
            +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63  VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
           IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123 IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182 QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
           QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y +
Sbjct: 183 QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHN 241

Query: 242 ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLK 293
            + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L+
Sbjct: 242 GDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLR 301

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
           +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD
Sbjct: 302 VELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVD 361

Query: 354 FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
            CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      
Sbjct: 362 MCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPGRET 421

Query: 414 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
           D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS
Sbjct: 422 DDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS 480

Query: 474 STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
              + L +EWK P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++
Sbjct: 481 QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVA 539

Query: 534 CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
           CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE  
Sbjct: 540 CLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 599

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
            YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVI
Sbjct: 600 HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI 659

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
           YSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E
Sbjct: 660 YSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYE 719

Query: 714 HPRRICHQEQSRTFAICSLK---------------------------------------N 734
            PR+IC+QE S+ F + S +                                        
Sbjct: 720 SPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHE 779

Query: 735 QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
            S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PE
Sbjct: 780 TSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPE 839

Query: 795 ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
           E EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W      
Sbjct: 840 EAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE--- 896

Query: 855 TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
            +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMS
Sbjct: 897 -KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS 955

Query: 915 AVEILDDDIYLGA 927
           AVEILDDD + G+
Sbjct: 956 AVEILDDDNFTGS 968


>gi|194901554|ref|XP_001980317.1| GG19434 [Drosophila erecta]
 gi|190652020|gb|EDV49275.1| GG19434 [Drosophila erecta]
          Length = 1140

 Score = 1027 bits (2655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/1149 (46%), Positives = 748/1149 (65%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G IA 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDA--ESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T RY   +L+     ++  ++T+A G+VSD +G P++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRYNVMILEARMVNDAITVVTKANGNVSDSVGVPSEGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPLDKDASELKATNLRMDELNVYDVEFLHGCMNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L++K+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLREKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RV ++G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++LN +    GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGARHGDSQLVRLNSEA-IDGSYVVPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+ P++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  Y+QL+QVTS SVRLVSS
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EW+     S+ V + N +Q+++A+    L Y+ I DG L E     LEYE++C
Sbjct: 481  ATKALVAEWRPTGDRSIGVVSCNTTQIVVASAC-DLFYIVIEDGTLREQSRRTLEYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E    S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDETQKKSDMVAVGLWTDISAVIMSLPDLETIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S +TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +   + E   S++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHQFVSPETISSLMSAKLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP  GRI++F   + KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  EEPEPKVGRIIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I ALY++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS---------VEELCK 1079
              +R+F    K   ++ F+DGDLIESFLDL R +M +  + + ++         VE++ K
Sbjct: 1072 TYYRNFQINTKVEPSEGFIDGDLIESFLDLGREKMRDAVQGLELTLNGERKSADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
 gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
          Length = 1140

 Score = 1024 bits (2647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/1149 (46%), Positives = 750/1149 (65%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G IA 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDA--ESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D +FI T RY   +L+     ++  ++T+A G+VSD +G P++ G +  
Sbjct: 64   MRHFRPPDSNKDLIFILTRRYNVMILEARMVNDAITVVTKANGNVSDSVGIPSEGGVMAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPLDKDASELKATNLRMDELTVYDVEFLHGCLNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L++K+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLREKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RV ++G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVSSNGLRYLLGNMDGQLYMLFLGTSETSKGVTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++LN +    GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGARHGDSQLVRLNSEA-IDGSYVVPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+ P++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  Y+Q++QVTS SVRLVSS
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCSNVDYDQVIQVTSDSVRLVSS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EW+     S+ V + N +Q+++A+    + Y+ I DG L E     LEYE++C
Sbjct: 481  ATKALVAEWRPTGDRSIGVVSCNTTQIVVASAC-DIFYIVIEDGSLREQSRRTLEYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E  + S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDETQTKSDLVAVGLWTDISAVIMSLPDLKTIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S +TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +   + E   S++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHHFVSPETISSLMSAKLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP  GRI++F   + KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  EEPEPKVGRIIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I ALY++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  LQ  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLQERLKKIIKSVGKIEH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE----ISKTMN-----VSVEELCK 1079
              +R+F    K   ++ F+DGDLIESFLDLSR +M +    +  T+N       VE++ K
Sbjct: 1072 TYYRNFQINNKVEPSEGFIDGDLIESFLDLSREKMRDSVQGLELTLNGERKGADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|21357503|ref|NP_650257.1| piccolo [Drosophila melanogaster]
 gi|74872881|sp|Q9XYZ5.1|DDB1_DROME RecName: Full=DNA damage-binding protein 1; Short=D-DDB1; AltName:
            Full=Damage-specific DNA-binding protein 1; AltName:
            Full=Protein piccolo
 gi|4928452|gb|AAD33592.1|AF132145_1 damage-specific DNA binding protein DDBa p127 subunit [Drosophila
            melanogaster]
 gi|7299719|gb|AAF54901.1| piccolo [Drosophila melanogaster]
 gi|220942640|gb|ACL83863.1| DDB1-PA [synthetic construct]
          Length = 1140

 Score = 1021 bits (2641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1149 (46%), Positives = 746/1149 (64%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G IA 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T RY   +L+    +    ++T+A G+VSD +G P++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPMDKDASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D+ D RHVK++E+ L+DK+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DS-DGRHVKSHEINLRDKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RV ++G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++LN +    GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGARHGDSQLVRLNSEA-IDGSYVVPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+ P++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  Y+QL+QVTS SVRLVSS
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EW+     ++ V + N +Q+L+A+    + Y+ I DG L E     L YE++C
Sbjct: 481  ATKALVAEWRPTGDRTIGVVSCNTTQILVASAC-DIFYIVIEDGSLREQSRRTLAYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E    S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDETQKKSDLVAVGLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S +TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQESSQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +     E   S++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP  GRI++F   + KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  EEPEPKVGRIIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I AL+++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS---------VEELCK 1079
              +R+F    K   ++ F+DGDLIESFLDLSR +M +  + + ++         VE++ K
Sbjct: 1072 TYYRNFQINSKVEPSEGFIDGDLIESFLDLSRDKMRDAVQGLELTLNGERKSADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
 gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
          Length = 1140

 Score = 1019 bits (2634), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/1149 (46%), Positives = 747/1149 (65%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G IA 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T RY   +L+    +    ++T+A G+VSD +G P++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPMDKDASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L+DK+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLRDKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RV ++G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++LN +    GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGARHGDSQLVRLNSEA-IDGSYVVPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP-FD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+  ++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESSYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  Y+QL+QVTS SVRLVSS
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EW+     S+ V + N +Q+L+A+    + Y+ I DG L E     L YE++C
Sbjct: 481  ATKALVAEWRPTGDRSIGVVSCNTTQILVASAC-DIFYIVIEDGSLREQSRRTLAYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E    S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDETQKKSDLVAVGLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S +TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQESSQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +   + E   S++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHQFVSPETISSLMSAQLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP  GRI++F   + KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  EEPEPKVGRIIIFHYNENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I ALY++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKLVGKIGH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS---------VEELCK 1079
            + +R+F    +   ++ F+DGDLIESFLDLSR +M +  + + ++         VE++ K
Sbjct: 1072 KFYRNFRIHTQVEPSQGFIDGDLIESFLDLSRDKMRDAVQGLELTLNGERKSADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
 gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
          Length = 1140

 Score = 1018 bits (2633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/1149 (47%), Positives = 747/1149 (65%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G +A 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTVAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDA--ESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T RY   +L+     +S  +IT+A G+VSD  G P++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRYNVMILEARMVNDSITVITKANGNVSDSAGIPSEGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D +    +A N+R++EL V D++FL+GC  PTI+V+++
Sbjct: 124  IDPKARVIGMVLYQGLFTIIPMDKEASELKATNLRMDELNVYDVEFLHGCLNPTIIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L++K+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLREKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RVD  G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVDGKGLRYLLGNMDGQLYMLFLGTSETSKGVTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++L+ +   +GSYV  +E + NL PI+D  
Sbjct: 303  KLGEISIPECITYLDNGFLYIGARHGDSQLVRLSSE-SIEGSYVIPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+ P++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESPYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  ++QL+QVTS SVRLV S
Sbjct: 422  NTLVLAFVGLTRILTLSGE-EVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EW+     S+ V + N++Q++LA+    + Y+ I DG L E     L YE++C
Sbjct: 481  ATKALICEWRPEGDRSIGVVSCNSTQIVLASAR-DIFYIVIEDGRLVEKSRKTLAYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E  + S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDETQNKSDLIAVGLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S  TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNILPKPGGNNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +     E   S++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            +E EP  GRI++F   D KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  DEPEPKVGRIIIFHYHDSKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I ALY++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE----ISKTMN-----VSVEELCK 1079
              +R+F    K   ++ F+DGDLIESFLDLSR +M +    +  T+N       VE++ K
Sbjct: 1072 TYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMRDAVLGLELTLNGERKGADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
 gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
          Length = 1140

 Score = 1018 bits (2632), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/1149 (47%), Positives = 747/1149 (65%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G +A 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTVAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDA--ESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T RY   +L+     +S  +IT+A G+VSD  G P++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRYNVMILEARMVNDSITVITKANGNVSDSAGIPSEGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D +    +A N+R++EL V D++FL+GC  PTI+V+++
Sbjct: 124  IDPKARVIGMVLYQGLFTIIPMDKEASELKATNLRMDELSVYDVEFLHGCLNPTIIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L++K+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLREKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RVD  G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVDGKGLRYLLGNMDGQLYMLFLGTSETSKGVTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++L+ +   +GSYV  +E + NL PI+D  
Sbjct: 303  KLGEISIPECITYLDNGFLYIGARHGDSQLVRLSSE-SIEGSYVIPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+ P++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESPYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  ++QL+QVTS SVRLV S
Sbjct: 422  NTLVLAFVGLTRILTLSGE-EVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EW+     S+ V + N++Q++LA+    + Y+ I DG L E     L YE++C
Sbjct: 481  ATKALICEWRPEGDRSIGVVSCNSTQIVLASAR-DIFYIVIEDGRLVEKSRKTLAYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E  + S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDETQNKSDLIAVGLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S  TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNILPKPGGNNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +     E   S++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            +E EP  GRI++F   D KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  DEPEPKVGRIIIFHYHDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I ALY++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE----ISKTMN-----VSVEELCK 1079
              +R+F    K   ++ F+DGDLIESFLDLSR +M +    +  T+N       VE++ K
Sbjct: 1072 TYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMRDAVLGLELTLNGERKGADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
 gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
          Length = 1140

 Score = 1018 bits (2631), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1149 (46%), Positives = 750/1149 (65%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI ++TP+GL+P+ ++ I G IA 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIGIVTPEGLRPLKEININGTIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWD--AESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++ FRP    +D LFI T RY   +L+     ++  +IT+A G+VSD +G P++ G I  
Sbjct: 64   MKHFRPPDSNKDLLFILTRRYNVMILEARMVGDTITVITKANGNVSDSVGIPSEGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP +      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPMEKDASELKATNLRMDELMVYDVEFLHGCLNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L+DK+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLRDKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RVD+ G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVDSKGLRYLLGNMHGQLYMLFLGTSESSKGITVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++L+ +   +GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGARHGDSQLVRLSSEA-IEGSYVIPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+  TDD P++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGTDDSPYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  ++QL+QVTS SVRLV S
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
            +S+ L  EW+     S+ V + N +Q+++A+    + Y+ I DG L E     L YE++C
Sbjct: 481  SSKSLVAEWRPEGDRSIGVVSCNGTQIVVASAR-DIFYIVIEDGNLQEKCRKTLAYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E  + S++ AVG+WTDIS  + SLP L+ I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDEKQNKSELVAVGLWTDISAVMLSLPSLDTIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S  TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDPITGQLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGPKPLRSSASTRAQNITCSSNILPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +   + E   +++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHQFVSPETISALMSAKLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            +E EP  GRI++F   D KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  DEPEPKVGRIIIFHYHDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I ALY++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI---------SKTMNVSVEELCK 1079
              +R+F    K   ++ F+DGDLIESFLDLSR +M E           +  +  VE++ K
Sbjct: 1072 TYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMREAVLGLELTLYGERKSADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|195571247|ref|XP_002103615.1| GD18880 [Drosophila simulans]
 gi|194199542|gb|EDX13118.1| GD18880 [Drosophila simulans]
          Length = 1140

 Score = 1014 bits (2622), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/1149 (46%), Positives = 744/1149 (64%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G IA 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGTIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T RY   +L+    +    ++T+A G+VSD +G  +  G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGILSAGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            ID   R+IG+ LY GLF +IP D      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDLKARVIGMCLYQGLFTIIPMDKDASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L+DK+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLRDKEFMKIAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RV ++G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVSSNGLRYLLGNMDGQLYMLFLGTAETSKGVTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIG+ +GDSQL++LN +    GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGARHGDSQLVRLNSEA-IDGSYVVPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+ P++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGVDESPYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  Y+QL+QVTS SVRLVSS
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EW+     S+ V + N +Q+L+A+    + Y+ I DG L E     L YE++C
Sbjct: 481  ATKALVAEWRPTGDRSIGVVSCNTTQILVASAC-DIFYIVIEDGNLREQCRRTLAYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LDI P+ E    S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FEGI 
Sbjct: 540  LDITPLDETQKKSDLVAVGLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEGIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S +TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSLSTTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQESSQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNFLPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +   + E   S++S    DD N YY V T+ V+P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHAHQFVSPETISSLMSAKLGDDPNTYYVVATSLVIP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP  GRI++F   + KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  EEPEPKVGRIIIFHYNENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I ALY++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS---------VEELCK 1079
              +R+F    K   ++ F+DGDLIESFLDLSR +M +  + + ++         VE++ K
Sbjct: 1072 TYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMRDAVQGLELTLNGERKSADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|194741158|ref|XP_001953056.1| GF17579 [Drosophila ananassae]
 gi|190626115|gb|EDV41639.1| GF17579 [Drosophila ananassae]
          Length = 1140

 Score = 1013 bits (2618), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/1150 (46%), Positives = 748/1150 (65%), Gaps = 79/1150 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNL+IA+  ++EI L+TP+GL+P+ ++ I G IA 
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLVIARNNQVEIDLVTPEGLRPLKEININGTIAV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T RY   +L+    +    ++T+A G+VSD +G P++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRYNVMILEARMVNDVITVVTKANGNVSDSVGIPSEGGVIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D +    +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPMDKEASELKATNLRMDELNVYDVEFLHGCLNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L++K+F++  W Q+N++  A +LI VP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLREKEFMKIAWKQDNVETEATMLITVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y RVD+ G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVDSKGFRYLLGNMDGQLYMLFLGTSETSKGITVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA-KGSYVEVLERYVNLGPIVDF 354
             LGE SI   I+YLDN  +YIG+ +GDSQL++L+   DA  GSYV  +E + NL PI+D 
Sbjct: 303  QLGEISIPECITYLDNGFLYIGARHGDSQLVRLS--SDAIDGSYVIPVENFTNLAPILDI 360

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PF 413
             VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   DD P+
Sbjct: 361  AVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDDSPY 420

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            +  LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  ++Q++QVTS SVRLV 
Sbjct: 421  ENTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCANVEHDQIIQVTSDSVRLVK 479

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
            S +++L  EW+     S+ V + N++Q+++A+    + Y+ I DG L E     L YE++
Sbjct: 480  SATKDLVAEWRPEGDRSIGVVSCNSTQIVVASAR-DIFYIVIEDGKLVEKSRKTLAYEVA 538

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            CLDI P+ E+ + S + AVG+WTDIS  I SLP+L  I  E L GEIIPRS+L+  FEGI
Sbjct: 539  CLDITPLDESQNKSDLVAVGLWTDISAVILSLPELETIYTEKLSGEIIPRSILMTTFEGI 598

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             YLLCALGDG +  F+++  TG+LTD+KKV+LGTQP TLRTF S  TT+VFA SDRPTVI
Sbjct: 599  HYLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVI 658

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YSSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE
Sbjct: 659  YSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGE 718

Query: 714  HPRRICHQEQSRTFAICSLK---------------------------------------- 733
             PRRI +QE S+TFA+ +L+                                        
Sbjct: 719  GPRRIAYQEASQTFAVSTLRIDVHGRGGTKPLRNSASTQAQNITYSSNILPKPGTGTSTA 778

Query: 734  -NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
             N    +E ++H + ++D  TFE +  +     E   S++S    DD N YY V T+ V+
Sbjct: 779  TNAEVGQEIDVHNLLVIDQNTFEVLHAHQFVAPETISSLMSAKLGDDPNTYYVVATSLVI 838

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            P+E EP  GRI++F   D KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W    
Sbjct: 839  PDEPEPKVGRIIIFHYHDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT--- 895

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
               +EL+ EC     I AL+++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    W
Sbjct: 896  -NEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKW 954

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
            M AVEILDDD +LG+E N NLF  +K+S   TDEER  L  +  +HLG+ VN FRHGSLV
Sbjct: 955  MRAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLV 1014

Query: 973  MRLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
            M+    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG + 
Sbjct: 1015 MQ----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIE 1070

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS---------VEELC 1078
            H  +R+F    K   ++ F+DGDLIESFLDL R +M +  + + ++         VE++ 
Sbjct: 1071 HTYYRNFQINTKVEPSEGFIDGDLIESFLDLGRDKMRDAVQGLEITLNGERKSADVEDVI 1130

Query: 1079 KRVEELTRLH 1088
            K VE+LTR+H
Sbjct: 1131 KIVEDLTRMH 1140


>gi|195395112|ref|XP_002056180.1| GJ10363 [Drosophila virilis]
 gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila virilis]
          Length = 1140

 Score = 1005 bits (2598), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/1149 (46%), Positives = 746/1149 (64%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G+I  
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGKITV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWD--AESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T R+   +L+     ++  ++T+A G+VSD +G  ++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRFNVMILEARMVGDAVTVVTKANGNVSDSVGILSEGGFIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPLDKDASELKATNLRMDELTVYDVEFLHGCQNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L+DK+F++  W Q+N++  A +LIPVP  + GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLRDKEFIKVAWKQDNVETEATMLIPVPSSIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI----THEKEKVTGLKIE 295
            + + A+     R S    Y RVD+ G RYLLG+  G L++L +    T +   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVDSKGLRYLLGNMDGQLYMLFLGTTETSKGTTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIGS +GDSQL++L+ +    GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGSRHGDSQLVRLSSEA-IDGSYVIPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PFD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   DD  ++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDDSAYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  QT  C +  Y+QL+QVT+ SVRLV S
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQTFLCANVDYDQLIQVTAESVRLVKS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EWK     S+ V + N++Q++ A+    + Y+ I DG L E     L YE++C
Sbjct: 481  ATKTLVGEWKPEGDRSIGVVSCNSTQIVAASAR-EIFYISIEDGSLVEKCRKTLPYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LD+ P+ E  + S++ AVG+WTDIS  I  LPDL  I  E L GEIIPRS+L+  FE I+
Sbjct: 540  LDVTPLDEKQTKSELVAVGLWTDISAVILRLPDLETIYTEKLSGEIIPRSILMTTFEDIN 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+L+  TG+LTD+KKV+LGTQP TLRTF S +TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFILDRTTGQLTDKKKVTLGTQPTTLRTFRSFSTTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK---------------------NQSCA--------------- 738
            PRRI +QE S+TFA+ +L+                     N SC+               
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNSSCSSNILPKPGGGNSTAA 779

Query: 739  -----EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
                 +E ++H + ++D  TFE + ++     E   S++S    DD N YY V T+ V P
Sbjct: 780  NAEVGQEIDVHNLLVIDQNTFEVLHSHQFVPPETISSLMSAKLGDDPNTYYVVATSLVFP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            +E EP  GRI++F   + KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  DEPEPKVGRIIIFHYNENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I AL+++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG E + NLF  +K+S   TDEER  L  +  +HLG+ +N FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGCETHDNLFVCQKDSAATTDEERQLLPELARFHLGDTINVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG ++H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIDH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE----ISKTMN-----VSVEELCK 1079
              +R++    K   ++ F+DGDLIESFLDL+R +M E    +  T+N       VE++ K
Sbjct: 1072 TYYRNYQINTKVEPSEGFIDGDLIESFLDLNRDKMREAVSGLELTLNGERKSADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|195108657|ref|XP_001998909.1| GI23368 [Drosophila mojavensis]
 gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mojavensis]
          Length = 1140

 Score = 1000 bits (2585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/1149 (46%), Positives = 742/1149 (64%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTSP +LNLIIA+  ++EI L+TP+GL+P+ ++ I G+I  
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEGLRPLKEININGKITV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWD--AESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T R+   +L+     ++  ++T+A G+VSD +G  ++ G I  
Sbjct: 64   MRHFRPPDSNKDLLFILTRRFNVMILEARMVGDNITVVTKANGNVSDSVGILSEGGFIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D      +A ++R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPLDKDASELKATSLRMDELIVYDVEFLHGCLNPTVIVIHK 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK +E+ L+DK+F++  W Q+N++  A +LIPVP P+ GV++IG E+IVY   
Sbjct: 184  DN-DGRHVKCHEINLRDKEFMKLAWKQDNVETEATMLIPVPSPIGGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI----THEKEKVTGLKIE 295
            + + A+     R S    Y RVD+ G RYLLG+  G L++L +    T +   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARVDSKGLRYLLGNMDGQLYMLFLGINETGKVPTVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIGS +GDSQL++L+ +P   GSYV  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGSRHGDSQLVRLSSEP-IDGSYVIPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP-FD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   DD  ++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDDSVYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EETEI GF S  Q+  C +  Y+QL+QVT+ SVRLV S
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETEIPGFASDLQSFLCANVEYDQLIQVTAESVRLVKS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
            +++ L  EWK     S+ V + N++Q++ A+    + Y+ I DG L E     L YE++C
Sbjct: 481  STKALVGEWKPEGDRSIGVVSCNSTQIVAASAR-EIFYIAIEDGSLVEKCRKTLAYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LD+ P+ E  + S++ AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FE I 
Sbjct: 540  LDVTPLDEKQNKSELVAVGLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEDIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+L+  TG LTD+KKV+LGTQP TLRTF S  TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFILDRTTGFLTDKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCSSNMLPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +     E   +++S    DD N YY V T+ V P
Sbjct: 780  NAEVGQEIDVHNLLIIDQNTFEVLHAHQFVPPETISALMSAKLGDDPNTYYVVATSLVFP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            +E EP  GRI++F   + KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  DEPEPKVGRIIIFHYHENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I AL+++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG E + NLF  +K+S   TDEER  L  +  +HLG+ +N FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGCETHDNLFVCQKDSAATTDEERQLLPELARFHLGDTINVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG ++H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIDH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE----ISKTMN-----VSVEELCK 1079
              +R++    K   ++ F+DGDLIESFLDLSR +M E    +  T+N       VE++ K
Sbjct: 1072 TYYRNYQINTKVEPSEGFIDGDLIESFLDLSRDKMHEAVTGLELTLNGERKSADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|166240328|ref|XP_637896.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
 gi|238064940|sp|B0M0P5.1|DDB1_DICDI RecName: Full=DNA damage-binding protein 1; AltName: Full=DNA repair
            protein E; AltName: Full=UV-damaged DNA-binding protein 1
 gi|165988543|gb|EAL64385.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
          Length = 1181

 Score =  994 bits (2571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1188 (44%), Positives = 757/1188 (63%), Gaps = 114/1188 (9%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRI 62
            ++N+V T  KPT+VTHS  GNFT P + NLII+KCT+IEI L+   GL+PM DV IYGRI
Sbjct: 1    MYNFVSTVQKPTSVTHSVTGNFTGPNDKNLIISKCTKIEIFLMDQDGLKPMFDVNIYGRI 60

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            + L+LF   G  QD+LFI+TE +KFC+L +D E  E+IT+A G+  D IGRPT+ GQ+GI
Sbjct: 61   SVLKLFSVAGSKQDYLFISTESFKFCILAYDYEKKEIITKASGNAEDTIGRPTEAGQLGI 120

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQL-------------------------------- 150
            IDPD R++ LHLY+GL K+I  DN                                    
Sbjct: 121  IDPDGRIVALHLYEGLLKLITLDNNNTPNKINNNNNNNNNNNNNNNNNNNNNINNNNFNI 180

Query: 151  ----------KEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDK 200
                      K   N+RLEELQVLD+ FLYGC  PTI VL++D KD +H+ TYE++ KD 
Sbjct: 181  NNNNNNSPIQKNVNNVRLEELQVLDMTFLYGCKVPTIAVLFKDTKDEKHISTYEISSKDT 240

Query: 201  DFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGR 260
            + V GPWSQ+N+   + LL+PVP  L GVL++ +  I Y +    +++ +  +   A+ R
Sbjct: 241  ELVVGPWSQSNVGVYSSLLVPVP--LGGVLVVADNGITYLNGKVTRSVAVSYTKFLAFTR 298

Query: 261  VDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
            VD DGSR+L GDH G L +LV+ H+++KV  LK E LG  SI S+ISYLD+ VVYIGSS 
Sbjct: 299  VDKDGSRFLFGDHFGRLSVLVLIHQQQKVMELKFEQLGRISIPSSISYLDSGVVYIGSSS 358

Query: 321  GDSQLIKLNLQPD-AKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSL 379
            GDSQLI+LN + D    SYV  LE + N+GP+VDFCVVD E+QGQ Q+VTCSG Y+DGSL
Sbjct: 359  GDSQLIRLNTEKDQTTDSYVTYLEAFTNIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSL 418

Query: 380  RIVRNGIGINEQASVELQGIKGMWSL---------------------RSSTDDPFDTFLV 418
            RI+RNGIGI EQAS+EL+GIKG++ +                      +   D  D +L+
Sbjct: 419  RIIRNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLI 478

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH--DAIYNQLVQVTSGSVRLVSSTS 476
             SFI  T++L+    +E+EETE EG  S   TL+C   D + N L+Q+T+ S+ L+ S +
Sbjct: 479  TSFIECTKVLSFQ-GEEIEETEFEGLESNCSTLYCGTIDKL-NLLIQITNVSINLIDSNT 536

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI--GDGILTEVKHAQLEYEISC 534
             +  ++W   P   +N+ + N  Q++L+     L+Y +I   +  +  VK  +L +EISC
Sbjct: 537  FKRVSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQINSSNKSIQLVKEIELPHEISC 595

Query: 535  LDINPIGE-NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            +DI+P      + SQ+ +VG+W DI++RIF LP L  I KE LGGEI+PRS+L+ +F+ I
Sbjct: 596  IDISPFDSFMDTKSQLVSVGLWNDITLRIFKLPTLEEIWKEPLGGEILPRSILMISFDSI 655

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             Y+ C+LGDGHL  F  +  + +L D++K++LGTQPI L+ F  KNT ++FA SDRPTVI
Sbjct: 656  DYIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKNTINIFAISDRPTVI 715

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
            YS NKKL YS VNLK+V+++  FNS  FP+S+AIA    LTIGTID+IQKLHI++IPL E
Sbjct: 716  YSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTIDEIQKLHIKTIPLNE 775

Query: 714  H-PRRICHQEQSRTFAICSLKNQS---------CAEESEMHFVRLLDDQTFEFISTYPLD 763
               RRI H E    +A+ ++KN           C E+ E+ ++R+ +DQTFE IS+Y LD
Sbjct: 776  EMGRRIVHLEDHSCYAVITVKNNEGLLGGAQDLCEEDEEVSYIRIYNDQTFELISSYKLD 835

Query: 764  TFEYGCSILSCSFS-DDSNVYYCVGTAYVLPEENEPTKGRILVFIV-------------- 808
             +E G SI  C F+ DD N Y  VGT+   P +   + GR+L+F +              
Sbjct: 836  PYEMGWSITPCKFAGDDVNTYLAVGTSINTPIK---SSGRVLLFSLSSSSSSNDKDSLDN 892

Query: 809  ---------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-LRDDGTREL 858
                      +GKL L+ E + + +VY L +FNG+L+AA+++++   ++   ++   + +
Sbjct: 893  NNNNNNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIAAVHKRLFSIRYTHSKEKNCKVI 952

Query: 859  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
             SE  H GH + L + +RG FI+VGD+MKS+SLL+ +  +G++E+ AR+    W+ +V +
Sbjct: 953  SSESVHKGHTMILKLASRGHFILVGDMMKSMSLLV-EQSDGSLEQIARNPQPIWIRSVAM 1011

Query: 919  LDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            ++DD ++GAE + N   V+KN++   + ER  L+ VG YH+GE +N  RHGSLV RLPDS
Sbjct: 1012 INDDYFIGAEASNNFIVVKKNNDSTNELERELLDSVGHYHIGESINSMRHGSLV-RLPDS 1070

Query: 979  DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 1038
            D   IPT+++ +VNG IGV+AS+  E ++F  KLQ  L +V++GVGG +HE WR+F+N+ 
Sbjct: 1071 DQPIIPTILYASVNGSIGVVASISEEDFIFFSKLQKGLNQVVRGVGGFSHETWRAFSNDH 1130

Query: 1039 KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
             T+D+KNF+DGDLIE+FLDL      +    + ++ ++  +R+E L +
Sbjct: 1131 HTIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDAFRRIESLMQ 1178


>gi|195037449|ref|XP_001990173.1| GH18378 [Drosophila grimshawi]
 gi|193894369|gb|EDV93235.1| GH18378 [Drosophila grimshawi]
          Length = 1140

 Score =  993 bits (2567), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/1149 (45%), Positives = 739/1149 (64%), Gaps = 77/1149 (6%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVVTA KPT V     GNFTS  +LNL+IA+  +IEI L+TP+GL+P+ ++ I G+I  
Sbjct: 4    HYVVTAQKPTAVVACLTGNFTSETDLNLVIARNNQIEIDLVTPEGLRPLKEININGKITV 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWD--AESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +  FRP    +D LFI T R+   +L+     ++  ++T+A G+VSD +G  ++ G I  
Sbjct: 64   MRHFRPPDTKKDLLFILTRRFNVMILEARMVGDTITVVTKANGNVSDSVGILSEGGFIAA 123

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            IDP  R+IG+ LY GLF +IP D      +A N+R++EL V D++FL+GC  PT++V+++
Sbjct: 124  IDPKARVIGMCLYQGLFTIIPLDKDASELKATNLRMDELTVYDVEFLHGCLNPTVIVIHR 183

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            DN D RHVK++E+ L+DK+F++  W Q+N++  A +LIPVP P+CGV++IG E+IVY   
Sbjct: 184  DN-DGRHVKSHEINLRDKEFMKIAWKQDNVETEATMLIPVPSPICGVIVIGRESIVYHDG 242

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIE 295
            + + A+     R S    Y R+D  G RYLLG+  G L++L + T E  K   V  +K+E
Sbjct: 243  SNYHAVAPLTFRQSTINCYARIDEKGLRYLLGNMDGQLYMLFLGTTETSKGITVKDIKVE 302

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             LGE SI   I+YLDN  +YIGS +GDSQL++L+ +    G++V  +E + NL PI+D  
Sbjct: 303  QLGEISIPECITYLDNGFLYIGSRHGDSQLVRLSSEA-IDGTFVIPVENFTNLAPILDIA 361

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP-FD 414
            VVDL+RQGQGQ++TCSG++KDGSLRI+R GIGI E A ++L GIKGMWSL+   D+  ++
Sbjct: 362  VVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDESSYE 421

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
              LV++F+  TRIL ++ E E+EET+I GF S  Q+  C +  Y+QL+QVT+ SVRLV S
Sbjct: 422  NTLVLAFVGHTRILTLSGE-EVEETDIPGFASDLQSFLCANVDYDQLIQVTAESVRLVKS 480

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
             ++ L  EWK     S+ V + N +Q++ A+    + Y+ I DG L E     L YE++C
Sbjct: 481  ATKALVGEWKPEGDRSIGVVSCNTTQIVAASAR-EIFYISIEDGSLVEKCRKILPYEVAC 539

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            LD+ P+ E  + S + AVG+WTDIS  I SLPDL  I  E L GEIIPRS+L+  FE I 
Sbjct: 540  LDVTPLDEKQNKSDLVAVGLWTDISAVILSLPDLETIYTEKLSGEIIPRSILMTTFEDIH 599

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLLCALGDG +  F+L+  TG+LT++KKV+LGTQP TLRTF S  TT+VFA SDRPTVIY
Sbjct: 600  YLLCALGDGSMYYFILDKTTGQLTEKKKVTLGTQPTTLRTFRSFATTNVFACSDRPTVIY 659

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            SSN KL++SNVNLKEV+HMC  N+ A+PDSLA+A +  + +GTID+IQKLHIR++PLGE 
Sbjct: 660  SSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEG 719

Query: 715  PRRICHQEQSRTFAICSLK----------------------------------------- 733
            PRRI +QE S+TFA+ +L+                                         
Sbjct: 720  PRRIAYQEASQTFAVSTLRIDVHGRGGAKPLRNSASTQAQNITCGSNILPKPGGGNSTAA 779

Query: 734  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
            N    +E ++H + ++D  TFE +  +     E   +++S    DD N YY V T+ V P
Sbjct: 780  NAEVGQEIDVHNLLIIDQNTFEVLHAHQFVPPETISTLMSAKLGDDPNTYYVVATSLVYP 839

Query: 794  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            EE EP  GRI++F   D KL  +AE +  G  Y+L  FNGK+LA I   ++LY+W     
Sbjct: 840  EEPEPKVGRIIIFHYNDNKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT---- 895

Query: 854  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +EL+ EC     I AL+++ +GDFI+VGDLM+SI+LL +K  EG   E ARD    WM
Sbjct: 896  NEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWM 955

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
             AVEILDDD +LG E + NLF  +K+S   TDEER  L  +  +HLG+ +N FRHGSLVM
Sbjct: 956  RAVEILDDDTFLGCETHDNLFVCQKDSAATTDEERQLLPELARFHLGDTINVFRHGSLVM 1015

Query: 974  RLPDSDVGQIPT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +    +VG+  T     V++GT NG IG++  +P + Y FL  L+  L+K+IK VG ++H
Sbjct: 1016 Q----NVGERTTPINGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIKSVGKIDH 1071

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE----ISKTMN-----VSVEELCK 1079
              +R++    K   ++ F+DGDLIESFLDL+R +M E    +  TM        VE++ K
Sbjct: 1072 TYYRNYQINTKVEPSEGFIDGDLIESFLDLNREKMREAVLGLELTMGGERKAADVEDVIK 1131

Query: 1080 RVEELTRLH 1088
             VE+LTR+H
Sbjct: 1132 IVEDLTRMH 1140


>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
          Length = 1054

 Score =  992 bits (2564), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/1104 (46%), Positives = 742/1104 (67%), Gaps = 77/1104 (6%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRI 62
            ++N+V T  KPT V HS  G FTSP E NLII+K T++EI  LTP+GL P+LDV IYGRI
Sbjct: 1    MYNFVSTVQKPTAVYHSVTGCFTSPNERNLIISKGTKLEIFTLTPEGLSPVLDVNIYGRI 60

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            + + +    G+ QD LFI TE+YK+C+L +++ES EL+T A GD    IGRP + GQIGI
Sbjct: 61   SDMRILTATGDKQDRLFILTEKYKYCILAFNSESRELVTIATGDAEGTIGRPAEAGQIGI 120

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
            +DP+CR+IG+HLY+GLF+V+P ++   ++E+F++R+E+LQ++D+ FL  CAKPT+ +L++
Sbjct: 121  VDPECRMIGMHLYEGLFRVVPLEHGQPVRESFSMRIEQLQIVDMVFLKQCAKPTLALLFK 180

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D +DARH+ TY + +  K+ +EG  SQ++++  + +L+P+      +LI+GE  I Y + 
Sbjct: 181  DTRDARHIVTYSIDVVTKELIEGA-SQDSVEENSTMLVPLDNG--AMLIVGEMAITYMNL 237

Query: 243  NAFKAIPIRPSITK----AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLG 298
                + P+  SI      AY ++D D  R+LL D  G                       
Sbjct: 238  KG-NSQPVTISIDHTHIVAYEQIDRD--RFLLADDCGSF--------------------- 273

Query: 299  ETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAK-GSYVEVLERYVNLGPIVDFCVV 357
                          VVY+GSS GDSQLI+LN   D   GSY+ V++++ NLGPI DFCVV
Sbjct: 274  -------------GVVYVGSSSGDSQLIRLNSHIDPNTGSYISVIDQFTNLGPITDFCVV 320

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF-DTF 416
            D+E+QGQGQ+VTCSG ++DGSLRI+RNGIGI EQAS+EL GI+G+WSL ++++       
Sbjct: 321  DVEKQGQGQLVTCSGTFQDGSLRIIRNGIGIAEQASIELPGIRGLWSLSNNSNPSSLHRH 380

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI-YNQLVQVTSGSVRLVSST 475
            L+VSFI+ T++L  + E E+EETEI GF S   TL+C +    N  +Q+ +  + LV S+
Sbjct: 381  LIVSFINSTKVLTFSGE-EIEETEIAGFDSNATTLYCGNTTENNHFIQIATSGIYLVDSS 439

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCL 535
            S  +R +  +P   S+N+A+ N SQ+L++ G  +L YLEI D  L   K AQL+YEISCL
Sbjct: 440  SL-MRLDQYTPEKGSINLASCNGSQILISQGS-NLTYLEISDSKLIIKKEAQLQYEISCL 497

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY 595
            DI+ + +  + S + AVG+WTDISVRI  LP+LN + KE LGGEI+PRS+L   FEG +Y
Sbjct: 498  DISLL-DGFTSSPVCAVGLWTDISVRILQLPNLNEVCKETLGGEILPRSILFITFEGTNY 556

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            LLC+LGDGHL NF  ++    L +RKK+SLGT PI L      N+T+VFA+SDRPTVIYS
Sbjct: 557  LLCSLGDGHLFNFTFDVVENLLQERKKLSLGTTPILL------NSTNVFASSDRPTVIYS 610

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 715
            +NKKLLYS +N+K VSH+C FNS AF DS+AIA E  L IGTID+IQKLHIR++PLGE  
Sbjct: 611  NNKKLLYSAINMKVVSHVCSFNSEAFRDSIAIATESSLVIGTIDEIQKLHIRNVPLGEMA 670

Query: 716  RRICHQEQSRTFAICSLKNQSCAEESEM---------------HFVRLLDDQTFEFISTY 760
            RRI + E+  ++A+ +++       +                 ++V+LL++QTFE  S Y
Sbjct: 671  RRITYVEEYHSYAVITIQRNDGNNNNNDNDNFNNNNNNGVPLTNYVKLLNEQTFETTSKY 730

Query: 761  PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKE 820
             L +FE+G SI++C F +D  +Y  VGTA+    E++ +KGRILVF +ED +L L+ E  
Sbjct: 731  ALKSFEFGWSIVTCRFKNDDALYVVVGTAFHNEVESQQSKGRILVFRIEDNRLILLDEVA 790

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 880
                VY L  FNG+LLA IN+++Q + W +    T +L     + GH L+  + +RG F+
Sbjct: 791  LPACVYCLLPFNGRLLAGINKRVQAFNWGV---DTNKLTKAESYSGHTLSHSMVSRGHFV 847

Query: 881  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
            +V DLMKS++LL+ + ++GAI+E AR+    W+S +E++DD+ ++G +N++NL  V+KN+
Sbjct: 848  LVADLMKSMTLLV-EDQQGAIKELARNPLPIWLSRIEMIDDETFIGGDNSYNLIVVQKNA 906

Query: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
            E +++ +   L+ VG++HLGE +N+F+HGSLV   PD D  ++PT++FGTV+G IGVI S
Sbjct: 907  EASSEIDNELLDTVGQFHLGETINKFKHGSLVTS-PDMDSPKLPTILFGTVSGAIGVIVS 965

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 1060
            +  + Y F EKLQ  L +V+ GVGGL  E WRSF+ E  T+ +KNF+DGDLIE+FLDL  
Sbjct: 966  ISKDDYEFFEKLQKGLNRVVHGVGGLPFENWRSFSTEHMTIPSKNFIDGDLIETFLDLRH 1025

Query: 1061 TRMDEISKTMNVSVEELCKRVEEL 1084
             +M E  K MN+S+E+  +R+E L
Sbjct: 1026 DKMLEAIKDMNISIEDTYRRIESL 1049


>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
          Length = 1275

 Score =  991 bits (2563), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/1253 (43%), Positives = 760/1253 (60%), Gaps = 172/1253 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRI 62
            ++NYVVTAHKPT V++SCVG+FT  +  NLI+A+  RIEI+LLT +GL+P+L+  +YGRI
Sbjct: 25   VFNYVVTAHKPTAVSYSCVGHFTHLERQNLIVARSNRIEIYLLTEEGLEPVLETTVYGRI 84

Query: 63   ATLELF--RPHGEAQDF---LFIATE-RYKFCVLQWDAESSELITRAMGDVSDRIGRPTD 116
            A L+L   R +G+ ++    L + TE RY   VL +DA ++ L T + GDVSD  GRP +
Sbjct: 85   AMLKLCEGRKNGDRENIPGRLVVVTEDRYSLAVLSYDAATNTLRTVSSGDVSDLTGRPVE 144

Query: 117  NGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL------- 169
            +G +G ID + R+I LH+YDGL K IPFD  G L +AFN  L EL+VLD  FL       
Sbjct: 145  HGMLGDIDRNARVIALHIYDGLIKFIPFDENGNLLQAFNANLNELKVLDFVFLPSTSSST 204

Query: 170  ---------YG--------------------------------------CAKPTIVVLYQ 182
                     YG                                       + P I VL++
Sbjct: 205  SGIAIDASEYGNNNNNNNNNNASDMNITLSNVSSLTRSINRENAGGGGLSSMPVIAVLHK 264

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY--- 239
            D KD RHV TY V L+D+D   GP+ Q  ++ G+  L+ +  P+ G +++GEETI Y   
Sbjct: 265  DVKDERHVSTYRVNLRDRDLEPGPFEQREVEIGSKKLLALSSPIGGCVVVGEETIAYLNE 324

Query: 240  --------------------------CSANAFKAIPIR---PSITKAYGRV--------- 261
                                       S NA   +  R    S T A  R          
Sbjct: 325  PAGIMDDHENNNNKNNNTATKNATSTLSNNANSNVMFRGENKSSTSALVRAITTPDLLMF 384

Query: 262  --------DADGSRYL-----LGDHAGLLHLLVI------THEKEKVTGLKIELLGETSI 302
                    D + S  L     + D  G L+LL++      T     V+ L IE LG+TS 
Sbjct: 385  SSACLIPSDENVSNQLVDRFLIADEDGDLYLLMLSKGTTSTMSTSIVSKLTIERLGKTSS 444

Query: 303  ASTISYLDNAVVYIGSSYGDSQLIKLNLQ--------PDAKGSYVEVLERYVNLGPIVDF 354
            AS +SYLDN+VV+IGS+YGDSQ+IKL+ +         +   SYVEVLE + NLGPIVDF
Sbjct: 445  ASAMSYLDNSVVFIGSAYGDSQIIKLHTEQVNTMMSASNELPSYVEVLEEFTNLGPIVDF 504

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
            CV+DLER GQGQ+VTCSG    GSLR++RNGIGI EQA + L GIKG++S +     P D
Sbjct: 505  CVMDLERHGQGQLVTCSGVGTSGSLRVIRNGIGIREQAQISLSGIKGLYSCKRDETMPLD 564

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
            ++L+VSFI+ETRILA+N  DELEE    GF + +QT+ C +   N + QVTS  V +  +
Sbjct: 565  SYLIVSFIAETRILAINDNDELEEAVFPGFDASSQTIECANISGNVICQVTSKGVYVCDA 624

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
            +S EL   W       +  ++A+ + + +AT GG+L YL    G ++E      + EISC
Sbjct: 625  SSGELVASWVPSDESPITASSASENTIAVATVGGNLHYLSFQGGKISETGKMTFDAEISC 684

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
            +D    G+      + AVG+W+   + +     + +   E+L  +++PRS L C FE   
Sbjct: 685  IDKTQCGDR----NVCAVGLWSTKVLLVELGSGMKVCHTENLSLDVVPRSTLFCFFEDTI 740

Query: 595  YLLCALGDGHLLNFLLNMKTG----ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 650
            YLL  LGDGHL+  +++  +      L+DRK VSLGTQP+TL+ F S+++ HVFA SDRP
Sbjct: 741  YLLTGLGDGHLITNVVDSSSSAGGFALSDRKSVSLGTQPVTLKLFKSQHSMHVFAGSDRP 800

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
            T+IYS++KKL+YSNVNL EV H+ PFN  AFPD+LA+A    LTIG +DDIQKLHIR++P
Sbjct: 801  TIIYSNSKKLVYSNVNLNEVLHVAPFNCDAFPDALALASGEHLTIGAVDDIQKLHIRTVP 860

Query: 711  LGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCS 770
            L E PRRI HQ +++T A+ ++K      + E  FVRL D++TFE ++ YPL+  E   S
Sbjct: 861  LREQPRRIAHQPETKTLAVLTMKESDVPGQEEEFFVRLFDNKTFETLAKYPLEPNENDAS 920

Query: 771  ILSCSFSDDSNVYYCVGTAYVLP-EENEPTKGRILVFIVE------------------DG 811
            I+SCSF  D ++Y+ VGTA+  P  E E ++GRILVF V                   DG
Sbjct: 921  IISCSFDGDDDIYFVVGTAFADPHSEPESSRGRILVFKVSNTSSSGGGNAVVNGNDHGDG 980

Query: 812  K-----------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 860
            +           L L+ EKET+GAVY+LNAF GKLLA IN  ++L+ W +  +  REL  
Sbjct: 981  RASASSSVLQKSLTLVCEKETRGAVYNLNAFCGKLLAGINSLVKLFNWGVSKENKRELVH 1040

Query: 861  ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            EC H GHI+AL V+T+ + IVVGDLMKSI+LL Y+ E G IEE A D+++NWM+AVEILD
Sbjct: 1041 ECSHMGHIIALKVETKDNLIVVGDLMKSITLLQYQRESGRIEEVAHDFSSNWMTAVEILD 1100

Query: 921  DDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--- 977
            D+ YLGAE+++NLFTV++N++  T+++RG LE+ G +HLG+ VNRFR GSLVMR+PD   
Sbjct: 1101 DNTYLGAESSYNLFTVQRNADADTEDKRGTLELCGAFHLGDSVNRFRRGSLVMRMPDLSD 1160

Query: 978  --SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
              S + +I T +FGT++G +GV+A+LP   ++ L K+Q  ++KV+ GVG  +H  +RSF+
Sbjct: 1161 DTSSLSEISTWLFGTISGGLGVVATLPKRDFMLLNKVQEAMQKVVTGVGNFSHSDFRSFH 1220

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS-VEELCKRVEELTRL 1087
            N +++V+ +NF+DGDL+E FLDLS+     +S+   VS  E+L K++EE++RL
Sbjct: 1221 NVQRSVEMRNFIDGDLVEIFLDLSKEDQVAVSELSGVSNSEDLVKKIEEISRL 1273


>gi|322787057|gb|EFZ13281.1| hypothetical protein SINV_13198 [Solenopsis invicta]
          Length = 986

 Score =  979 bits (2532), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/993 (49%), Positives = 680/993 (68%), Gaps = 59/993 (5%)

Query: 5   NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
           +YVVTAHKPT VT    GNFTSP +LNLI+AK  R+EI+L+TP+GL+P+ +V IYG+IA 
Sbjct: 4   HYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAI 63

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGI 122
           ++ FRP  E +D LF+ T RY   +L+   + E  E+IT+A G+V+DRIG+ ++ G   +
Sbjct: 64  IKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIGKASETGIKAV 123

Query: 123 IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
           IDP  R+IGL LYDGLFK+IP D      +A +IR++E QV D+ FL+GCA PT+++++Q
Sbjct: 124 IDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMDEQQVQDVNFLHGCANPTLILIHQ 183

Query: 183 DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
           D  + RHVKT+E+ L+DK+F + PW Q+N++  A ++IPVP P+CG +IIG+E+I+Y   
Sbjct: 184 D-INGRHVKTHEINLRDKEFSKIPWRQDNVEREAMMVIPVPSPMCGAIIIGQESILYHDG 242

Query: 243 NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKI 294
           N++ A+    I+ S    Y +VD  G RYLLGD AG L +L +  EK+      V  LK+
Sbjct: 243 NSYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFLEQEKKPDGTLSVKDLKV 302

Query: 295 ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
           ELLGE SI   I+YLDN V+Y+GS  GDSQLIKL  + D  GSY   +E + NL PIVD 
Sbjct: 303 ELLGEISIPECITYLDNGVIYVGSRLGDSQLIKLITKADENGSYCVPMETFTNLAPIVDM 362

Query: 355 CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
            VVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI E AS++L GIKGMW+L+      FD
Sbjct: 363 AVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALKVGGSH-FD 421

Query: 415 TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             LV+SF+ +TRIL +N E E+EET+I GF +  QT    +   +  +Q+T  SVRL+S 
Sbjct: 422 NTLVLSFVGQTRILTLNGE-EVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSVRLISY 480

Query: 475 TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
            S+ + +EW+     +++V   N +QVL ATG   L Y+EI    +       L++E++C
Sbjct: 481 ESKMVISEWEPQNKRTISVVACNGTQVLCATGN-DLFYIEISCNQIVSKGFVTLQHEVAC 539

Query: 535 LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
           LDI+P+  N +  +I AVG+WTDISVRI  LP+L  I KE LGGEIIPRS+L+  FEG +
Sbjct: 540 LDISPLDGNEA--KIVAVGLWTDISVRILILPNLEEINKELLGGEIIPRSILMTCFEGNT 597

Query: 595 YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
           YLLCALGDG +  F+L+ +TG L+D+KKV+LGTQP  LRTF S +TT+VFA SDRPTVIY
Sbjct: 598 YLLCALGDGSMYYFILHKQTGILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY 657

Query: 655 SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
           SSN KL++SNVNLKEV+HMC  N+ ++PDSLA+A +  +TIGTID+IQKLHIR++PLGE 
Sbjct: 658 SSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGES 717

Query: 715 PRRICHQEQSRTFAICSLK---------------------------------------NQ 735
           PRRI +QE S+TF + +++                                         
Sbjct: 718 PRRIAYQESSQTFGVITMRVDVQESSGVSIVRHSASTQATSTSSSSHIASHNKPSGHTAS 777

Query: 736 SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
              +E E+H + ++D  TFE +  + L   EY  S++S    +D   Y+ VGTA++ P+E
Sbjct: 778 EIGQEIEVHNLLIIDQHTFEVLHAHTLMATEYALSLISTRLGEDPTSYFVVGTAFINPDE 837

Query: 796 NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
            EP  GRIL++   +GK   +AEKE KG+ YSL  FNGKLLA+IN  ++L++W       
Sbjct: 838 TEPKMGRILLYHWSEGKFTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWT----AE 893

Query: 856 RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
           +EL+ EC H  +I+ALY++T+GDF++VGDLM+S++LL YK  EG+ EE ARDYN NWM++
Sbjct: 894 KELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTS 953

Query: 916 VEILDDDIYLGAENNFNLFTVRKNSEGATDEER 948
           +EILDDD +LGAEN FNLF  +K+S   +++ER
Sbjct: 954 IEILDDDTFLGAENCFNLFVCQKDSAATSEDER 986


>gi|328874742|gb|EGG23107.1| UV-damaged DNA binding protein1 [Dictyostelium fasciculatum]
          Length = 1116

 Score =  973 bits (2516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/1133 (46%), Positives = 751/1133 (66%), Gaps = 80/1133 (7%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +N++ T HKPT VT S  G+FTSP E NLII+KCT+IEI  L P+GL P+L+  IYGRI+
Sbjct: 3    YNFITTVHKPTAVTESVTGHFTSPNEKNLIISKCTKIEIFTLAPEGLVPILETNIYGRIS 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             ++LF  HGE Q+ LFI TER+K+CVL +DAE  ELITRA G+  D IGRP D+GQ+ II
Sbjct: 63   NMKLFSVHGEKQELLFILTERFKYCVLSYDAEKKELITRASGEADDSIGRPADSGQLAII 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCA-KPTIVVLYQ 182
            DPD +++ LHLY+GL K+IP + KG LK A+N+RL+ELQV+DI F+     +PT+ VL +
Sbjct: 123  DPDSKVLALHLYEGLLKIIPIE-KGTLKTAYNVRLQELQVIDIVFIAPTNNQPTLAVLSK 181

Query: 183  DNKDARHVKTYEVALKDKDFVEGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            D +D+++V TY ++LKDK+ +E    W+Q+N+++GA  LI       G+L++GE  + + 
Sbjct: 182  DTRDSKNVNTYILSLKDKELIESANTWAQSNVEDGASKLIAHQN---GLLVVGETLVSFL 238

Query: 241  S-ANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVIT-HEKEKVTGLKIELLG 298
               ++ + IPI  +   A GRVD D  ++L GDH G L+ L+++ +EKE    L+ E LG
Sbjct: 239  KPTSSPRTIPIAGTRITAVGRVDKD--KFLFGDHLGQLYFLLLSQNEKE----LRFEKLG 292

Query: 299  ETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAK-GSYVEVLERYVNLGPIVDFCVV 357
            ET  ASTISYLD+ VV+IGS+ GDSQLI+L    D    SYV VL+ + NLGPI DFC+V
Sbjct: 293  ETCTASTISYLDSGVVFIGSALGDSQLIRLLSDRDPNTNSYVTVLDTFANLGPIPDFCLV 352

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFL 417
            D+E+QGQ Q+V CSG +K+GSLR++RNGIGI EQAS++L GIK +WSL   +D     +L
Sbjct: 353  DIEKQGQNQIVACSGGFKEGSLRVIRNGIGITEQASIDLPGIKAIWSLARGSD----RYL 408

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            ++SFIS T++L    ED +EETEI GF  Q+ TL+C +    Q++Q+++  + LV   + 
Sbjct: 409  ILSFISSTKVLEFQGED-IEETEIAGFDLQSPTLYCGNVADKQILQISTSGIYLVDHETN 467

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI 537
               + WK P   S+N+A+   +Q+L++ G   L+Y EI D  + ++K  ++E+EISCLDI
Sbjct: 468  LNYDVWK-PSSGSINLASHQGNQILISFGKT-LIYFEIKDQKIIKLKELEMEFEISCLDI 525

Query: 538  NP--IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY 595
            +   +GE    S+I  VG+WTDIS+RI SLP L  + KE+LGGE+IPRSVL+ AFEGI+Y
Sbjct: 526  SSFQVGER---SKICVVGLWTDISLRILSLPTLEQVHKENLGGEVIPRSVLMIAFEGINY 582

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            LLC+LGDGHL NF+++     L +RKKVSLG QPI L  F  K T +VFA+SDRPTVIYS
Sbjct: 583  LLCSLGDGHLFNFIVDTINNTLHERKKVSLGNQPIILSKFQLKGTVNVFASSDRPTVIYS 642

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL-GEH 714
            SN+KLLYS VNLK V  +C F+S  F D +AIA +  L+IG IDDIQ+LHI+ I L GE 
Sbjct: 643  SNRKLLYSVVNLKVVVGVCSFDSEVFRDCIAIATDKTLSIGHIDDIQRLHIKKIDLGGEF 702

Query: 715  PRRICHQEQSRTFAICSLK-NQSCAEES--EMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
             RRI H E  + +A+ +++ ++S  EES  E +F+R+++ QTFE I  YPL   EYG +I
Sbjct: 703  ARRIAHVEAHQCYALITIRPDESGLEESETEQNFIRIVNQQTFETIVKYPLKENEYGWTI 762

Query: 772  LSCSFS-----------------------------------------DDSNVYYCVGTAY 790
            LS +F                                          ++ + Y  VGT Y
Sbjct: 763  LSTNFKETLTSNSSSTSSSTSTTSTTSTSGRRRLPTTTTTTTTSNDEEEQSEYIVVGTTY 822

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
               +  E   GRILVF + D +L L+ E   +G+++ + AFNG+LL AIN+ +  Y W  
Sbjct: 823  HCHDRKEC--GRILVFKMIDSRLILLDETTVRGSIFCMIAFNGQLLVAINKSVHRYTWS- 879

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
             D  + +L  E  + GH  +LY+  RGDF++VGD+MKS++LL    ++  ++E +R    
Sbjct: 880  GDSSSGKLTGEEIYGGHTASLYLAGRGDFVLVGDMMKSMALLQASGKD--VKELSRSSQP 937

Query: 911  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 970
             W++ +  +DDD YLG++N++NL  ++KN+E A + +   L+ +G  H GEF+NRF HG+
Sbjct: 938  FWLTGLTFIDDDTYLGSDNSYNLILMKKNTETANEVDSQLLDNIGHIHTGEFINRFHHGT 997

Query: 971  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
            L   L D D  +  ++IF T++G IGVI+++  + Y F  KLQ  L +VI+G+GG +H++
Sbjct: 998  LAT-LTDVDSPKPNSIIFATISGCIGVISTISKQDYDFFSKLQVGLNRVIRGIGGFSHDR 1056

Query: 1031 WRSFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE 1082
            WRSF NE    ++++NF+DGDL+E FL L   +M E++K M++S+E+  K++E
Sbjct: 1057 WRSFQNEHISNIESRNFIDGDLVEQFLHLRHDKMLEVTKDMDISIEDTYKKIE 1109


>gi|195996153|ref|XP_002107945.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
 gi|190588721|gb|EDV28743.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
          Length = 1134

 Score =  972 bits (2513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/1149 (45%), Positives = 750/1149 (65%), Gaps = 83/1149 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NYVVTAHKPT    S  GNFT P +LNLI+AK  R++I L+T +GL P+LDV +YGRIA+
Sbjct: 4    NYVVTAHKPTAANASLFGNFTGPHDLNLIVAKNNRLDIQLVTAEGLVPLLDVGVYGRIAS 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            ++L RP  E  D LFI T RY+ C+LQ+  E+  +ITRA GD+ +R+ RP++ G IGI+D
Sbjct: 64   MQLIRPENENCDLLFILTCRYRVCILQYKPETKSIITRAYGDMKNRVSRPSETGLIGIVD 123

Query: 125  PDCRLIGLHLYDGLFKVIPFD-NKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            PDC++I L LYDG  K+IP + +  +   A ++RLEELQVLD+KFLYG  +PTI ++Y+ 
Sbjct: 124  PDCKVICLKLYDGWLKLIPLELDTDKEMSAEDVRLEELQVLDVKFLYGFTEPTIALIYES 183

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
             ++ R++KTYE++L++ D    PW+   ++  A +++PVPPP CG+++IG  +I Y    
Sbjct: 184  GQN-RYLKTYEISLQNADIHRQPWNIGKVEEEAFMILPVPPPSCGMVVIGAGSISYYKGQ 242

Query: 244  AFKAIPIRPSITK----AYGRVDADGSRYLLGDHAGLLHLLVITHEKE----KVTGLKIE 295
               ++ I P+  K     +GRVD++G RYLLGD++G L +L++  E      KV  L +E
Sbjct: 243  --DSLHITPASLKDRITCFGRVDSNGCRYLLGDYSGRLFMLILVQEHSQSGIKVKDLCLE 300

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIK-LNLQPDAK-GSYVEVLERYVNLGPIVD 353
             LGETSI S I+YLDNA  YIGSS GDSQLIK LN  PD++  SY++V++ + NLGPI+D
Sbjct: 301  YLGETSIPSCITYLDNAFAYIGSSCGDSQLIKVLNTSPDSETDSYIDVIDNFTNLGPIID 360

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR--SSTDD 411
               VDL++QGQ Q+VTCSG  K+ SLR++RNGIGI+E A+++L  I G+W LR  S +  
Sbjct: 361  MVSVDLDKQGQSQLVTCSGFGKNASLRVLRNGIGIHELANIDLDHICGIWRLRTVSRSIS 420

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             +D  LV+SF   +R L  +   E+EET+I GF    +T F  +  ++Q+VQ+++ SVRL
Sbjct: 421  EYDDVLVLSFAGHSRFLKFDGR-EVEETDISGFDDYKETDFAANVAFDQIVQISNESVRL 479

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
                 R L  EWK P G +++ +TA  +Q+++A+G   L YLEIG+G L +V +  LE++
Sbjct: 480  AGCDGRGLLQEWKPPNGKTISKSTAGNTQIMVASGC-ELFYLEIGEGELKQVSNISLEHD 538

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            I+C+DI+ + ++   +QI AVG+W D+S R+  LP+L L+  E LGG+IIPRS++L  F+
Sbjct: 539  IACIDIS-LKDDNERAQICAVGLWVDMSARLLLLPNLQLMLTESLGGDIIPRSIMLNRFD 597

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
               YLL A+GDG L  +L+N  T  LT+RK V+LG     L TF S + ++VFA SDRPT
Sbjct: 598  NEIYLLVAMGDGTLAYYLVNTTTCSLTNRKSVNLGVVHSNLYTFKSGSISNVFACSDRPT 657

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            VIY +N KL++SNVNLK+V+ M PF+S +FP+SLA+  +    IGTID+IQKLHIR+ PL
Sbjct: 658  VIYINNHKLVFSNVNLKKVNFMSPFHSESFPNSLALVNDSGFIIGTIDEIQKLHIRTKPL 717

Query: 712  GEHPRRICHQEQSRTFAICSLKNQ------------------------SCAEESE----- 742
            GE  R    QE+S++F I + + +                         C E+S+     
Sbjct: 718  GETTR----QEESQSFGIITCRTEVPSEDDKNFVPTHQSASLLVSNRTMCPEQSDNSSST 773

Query: 743  ----------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
                      +  V ++D  + +      L   E+G S++SC+F +D   YYCVGTA+V 
Sbjct: 774  FDSDTLSEKNIDSVLIIDQHSLDAQCALQLQDCEWGMSLISCTFENDPEAYYCVGTAFVN 833

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
             E+ EPTKG I +    +GK+Q +  KE  GAVY + AFNG+LLA++N  + +Y+W    
Sbjct: 834  LEDKEPTKGNIRILKYFEGKIQQVHSKEVSGAVYCMVAFNGRLLASVNSTVSVYEWT--- 890

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
               +EL  E   H ++LALY++T+GDFI++GDLM+SISL  Y+     IE   ++ + NW
Sbjct: 891  -SNKELVEETSFHNNVLALYLKTKGDFILIGDLMRSISLCAYRPMNNEIELICKNNDPNW 949

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
            M+AVEI+DDD YLG EN+ NLFT +KNS  +++EE+  L  VG YH+GEFVN FR GSLV
Sbjct: 950  MTAVEIIDDDSYLGGENSHNLFTCQKNS-SSSEEEQKHLPTVGVYHVGEFVNVFRQGSLV 1008

Query: 973  MR----LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            M+    +PDS  G I   +FGTV+G +GV+ +L    + F+  +   L  V+KGVG + H
Sbjct: 1009 MQNTVDIPDSVQGSI---LFGTVSGAVGVVVTLAPAMFEFVSAIANKLSTVVKGVGKIEH 1065

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS---------VEELCK 1079
            + WRSF+N++KT   ++F+DGDL+ESFLDLS   M  ++  + +          VE++ K
Sbjct: 1066 QFWRSFSNDRKTEPCQSFVDGDLVESFLDLSPEDMQRVANGLTIQTADGTRPAMVEDVLK 1125

Query: 1080 RVEELTRLH 1088
             VEEL+R+H
Sbjct: 1126 TVEELSRIH 1134


>gi|157128866|ref|XP_001655232.1| DNA repair protein xp-e [Aedes aegypti]
 gi|108882187|gb|EAT46412.1| AAEL002407-PA [Aedes aegypti]
          Length = 980

 Score =  969 bits (2505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/983 (48%), Positives = 672/983 (68%), Gaps = 55/983 (5%)

Query: 5   NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
           NY+VTA KPT VT    GNFTS  +LNLI+AK +R+EI+L+TP+GL+P+ ++ I G+IA 
Sbjct: 4   NYIVTAQKPTAVTACVTGNFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEIGINGKIAV 63

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGI 122
           ++LFRP    +D +FI T RY   +L+   +    E+IT+A G+V+DR+G+P + G + +
Sbjct: 64  MKLFRPAEAQKDLIFILTHRYNAMILECAVQGDDIEIITKAHGNVADRVGKPAETGILAV 123

Query: 123 IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
           IDP  R+IG+ LY+GLFK+IP D      +A ++R+EE+ V D++FLYG   PT++V++Q
Sbjct: 124 IDPKARVIGMRLYEGLFKIIPLDRDTHELKATSLRMEEVHVQDVEFLYGTQHPTLIVIHQ 183

Query: 183 DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
           D  + RH+KT+E+ LKDKDF +  W Q+N++  A +LIPVP PL G ++IG+E++VY   
Sbjct: 184 D-LNGRHIKTHEINLKDKDFTKIAWKQDNVETEATMLIPVPTPLGGAIVIGQESVVYHDG 242

Query: 243 NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI-THEKEK----VTGLKI 294
           +++ A+    I+ S    Y RVD+ G RYLLG+ +G L ++ + T E  K    V  +K+
Sbjct: 243 DSYVAVAPAIIKQSTINCYARVDSKGFRYLLGNMSGHLFMMFLETEENSKGLLSVKDIKV 302

Query: 295 ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
           ELLG+ +I   I+YLDN V++IGS +GDSQL+KLN      G+YV V+E + NL PI+D 
Sbjct: 303 ELLGDITIPECITYLDNGVLFIGSRHGDSQLVKLNTTAGDNGAYVTVMETFTNLAPIIDM 362

Query: 355 CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD-PF 413
           C+VDLE+QGQGQ++TCSG+YK+GSLRI+RNGIGI E A ++L GIKGMW+LR   DD P+
Sbjct: 363 CIVDLEKQGQGQMITCSGSYKEGSLRIIRNGIGIQEHACIDLPGIKGMWALRVGIDDSPY 422

Query: 414 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
           D  LV+SF+  TRIL ++ E E+EETEI GF S  QT +C +  + Q++QVT  + RL+ 
Sbjct: 423 DNTLVLSFVGHTRILTLSGE-EVEETEIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQ 481

Query: 474 STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
             ++ +  EWK P    ++V   N+ Q++ AT    + Y+EIG+  L       L+YE++
Sbjct: 482 CDNKSMICEWKPPDDKRISVVACNSCQMVCATAC-DIYYIEIGESKLVHKSTVTLDYEVA 540

Query: 534 CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
           CLDI+P+ +N +++++ AVG+WTDIS  I  LP+L ++  E LGGEIIPRS+L+  FEGI
Sbjct: 541 CLDISPLEDNATHAELVAVGLWTDISACILRLPNLEVVHTEKLGGEIIPRSILMAHFEGI 600

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
            YLLCALGDG +  F+L+  T  LTD+KKV+LGTQP  L+TF S +TT+VFA SDRPTVI
Sbjct: 601 VYLLCALGDGSMFYFVLDKNTNRLTDQKKVTLGTQPTILKTFRSLSTTNVFACSDRPTVI 660

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
           YSSN KL++SNVNLKEV+HMC  N+ A+ DSLA+A +  + +GTID+IQKLHIR++PLGE
Sbjct: 661 YSSNHKLVFSNVNLKEVNHMCSLNAEAYQDSLALATKNSVILGTIDEIQKLHIRTVPLGE 720

Query: 714 HPRRICHQEQSRTFAICSLK-------------------------------------NQS 736
            PRRI +QE S+TF + +++                                     N  
Sbjct: 721 SPRRIAYQEASQTFGVITVRTDIQDSSGLTPSRQSASTQTTNVTLSTNMGLLKAGASNAE 780

Query: 737 CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 796
             +E E+H + ++D  TFE +  +     EY  S++S    +D N YY VGTA V PEE 
Sbjct: 781 FGQEVEVHNLLIIDQNTFEVLHAHQFMQTEYAMSLISAKLGNDPNTYYIVGTALVNPEEP 840

Query: 797 EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
           EP  GRI+++   DG L  ++EKE KG+ YSL  FNG++LA+IN  ++LY+W   DD  +
Sbjct: 841 EPKVGRIIIYHYADGNLTQVSEKEIKGSCYSLVEFNGRVLASINSTVRLYEWT--DD--K 896

Query: 857 ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
           +L+ EC H  ++LALY +T+GDFI+VGDLM+SI+LL YK  EG+ EE ARDY  NWM+AV
Sbjct: 897 DLRLECSHFNNVLALYCKTKGDFILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAV 956

Query: 917 EILDDDIYLGAENNFNLFTVRKN 939
           EILDDD +LGA+N+ NLF   K+
Sbjct: 957 EILDDDAFLGADNSNNLFVCLKD 979


>gi|330792580|ref|XP_003284366.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
 gi|325085712|gb|EGC39114.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
          Length = 1064

 Score =  964 bits (2491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/1067 (47%), Positives = 727/1067 (68%), Gaps = 37/1067 (3%)

Query: 48   QGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV 107
            +GL+PM DV IYGRI+ L+LF   G+ QD+LFI+TE +KFC+L +D+E  E++T+A G+ 
Sbjct: 4    EGLKPMFDVNIYGRISVLKLFSAGGK-QDYLFISTESFKFCILAYDSEKKEIVTKASGNA 62

Query: 108  SDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFD---NKGQLKEAFNIRLEELQVL 164
             D IGRPT+ GQ+GIIDPD RLI LHLY+GL K+I  +   N    K A N RLEELQV+
Sbjct: 63   EDTIGRPTEAGQLGIIDPDGRLIALHLYEGLLKLINIEKGLNNPIQKTAANTRLEELQVM 122

Query: 165  DIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPP 224
            D+ FLYGC  PTI VL++D KD +H+ TYEV+ KD++   GPWSQ+N+   + +L+ VP 
Sbjct: 123  DMTFLYGCKIPTIAVLFKDTKDEKHIVTYEVSQKDQELCPGPWSQSNVGVYSSMLVAVP- 181

Query: 225  PLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITH 284
             L GVL++ +  I Y +    ++I I  +   AY RVD DGSRYL GDH G L +LV+ +
Sbjct: 182  -LGGVLVVADNGITYMNGRTTRSIAIPYTKFLAYDRVDKDGSRYLFGDHFGRLSVLVLLN 240

Query: 285  EKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPD-AKGSYVEVLE 343
             +++VT LK E LG TSI S+ISYLD+ VV+IGSS GDSQLI+LN + D A  SY+  LE
Sbjct: 241  HQQRVTELKFETLGRTSIPSSISYLDSGVVFIGSSSGDSQLIRLNTEKDPATDSYISHLE 300

Query: 344  RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW 403
             + N+GPIVDFC+VD E+QGQ Q+VTCSG Y+DG+LR++RNGIGI E+A +EL+G+KG+W
Sbjct: 301  NFTNIGPIVDFCLVDTEKQGQAQIVTCSGTYRDGTLRVIRNGIGIAEKALIELEGVKGLW 360

Query: 404  SLR----SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA-IY 458
             ++    S   +P D +L+VSFI  T++L     +E+EETE EG  S + T+ C +    
Sbjct: 361  PIKENDPSDPLNPKDQYLIVSFIGYTKVLQFQ-GEEIEETEFEGLDSNSSTILCSNIDKE 419

Query: 459  NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG 518
            N +VQVT+ ++ L++  + +  ++WKSP G  +N+ ++N SQ+ L+ G   L Y EI + 
Sbjct: 420  NVIVQVTNQAINLINPITFKRVDQWKSPSGSPINLVSSNQSQIALSIGKS-LYYFEINEQ 478

Query: 519  ILTE-VKHAQLEYEISCLDINPIGE-NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
               E +K  +L +EISC+DI+P+     S SQI AVG+WTDI++R+F LP L  I KE L
Sbjct: 479  SRIELIKEIELPHEISCIDISPLDSFMDSRSQICAVGLWTDITLRLFKLPTLEEIHKEPL 538

Query: 577  GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTG-ELTDRKKVSLGTQPITLRTF 635
            GGEIIPRS+L+ +FEGI Y+ C+LGDGHL  F +++    +L D++K++LGTQPI L+ F
Sbjct: 539  GGEIIPRSILMISFEGIDYIFCSLGDGHLFKFKIDIANNWKLFDKRKLTLGTQPIILKKF 598

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
              KNT ++FA SDRPTVIYS+NKKL YS VNLKEV+++  FNS AFP S+AI+ E  L I
Sbjct: 599  KLKNTINIFALSDRPTVIYSNNKKLFYSVVNLKEVTNVTSFNSDAFPGSMAISSESSLII 658

Query: 696  GTIDDIQKLHIRSIPL-GEHPRRICHQEQSRTFAICSLK-----------NQSCAEE--S 741
            GTID+IQKLHI++I L GE  RRI H E+   +A+ ++K           N +  +E   
Sbjct: 659  GTIDEIQKLHIKTISLNGEMARRIVHLEEYSCYAVITIKTNEDIISGNGENATTIDEVEE 718

Query: 742  EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 801
            E+ +VRL DDQTFE +S++ L+ +E G S+ S  F DD   Y  VGT+  +P+    T G
Sbjct: 719  EVSYVRLFDDQTFEPLSSFRLEHYEMGWSLTSTKFDDDPCTYLAVGTSINIPDRQ--TSG 776

Query: 802  RILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML-RDDGTRELQ 859
            R+L+F I E  KL L+ E   +  V  L+ FNG+L+AA+ +++   ++   ++   + + 
Sbjct: 777  RVLLFNINEAKKLVLLEEISFRSGVLYLHQFNGRLIAAVLKRLYSIRYSYSKEKNCKVIS 836

Query: 860  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
            SE  H GH + L + +RG F++VGD+MKS+SLL  + E G++ + A++    W+ ++ ++
Sbjct: 837  SENVHKGHTMILKLASRGHFMLVGDMMKSMSLL-GQSENGSLVQIAKNPQPIWIRSIAMI 895

Query: 920  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
            +DD ++G+E + N   V+KN++   + ER  L+ VG YH+GE +N    GSLV RLPDSD
Sbjct: 896  NDDYFIGSETSNNFVVVKKNNDSTNELERELLDSVGHYHIGESINSMLCGSLV-RLPDSD 954

Query: 980  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
               IPT+++ +VNG IGVIAS+  E Y F  KLQ  L +V+ G+GG  HE WR+F+N+  
Sbjct: 955  APPIPTILYASVNGSIGVIASISKEDYEFFSKLQKGLNRVVNGIGGFTHESWRAFSNDHH 1014

Query: 1040 TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
            TV+++NF+DGDLIE F DL    M ++ + MNV+++E  KR+E L +
Sbjct: 1015 TVESRNFIDGDLIEMFPDLKIESMAKVIQDMNVTLDETLKRIESLMQ 1061


>gi|449488592|ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
           [Cucumis sativus]
          Length = 570

 Score =  959 bits (2480), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/502 (93%), Positives = 487/502 (97%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
           MS+WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAKCTRIEIHLLT QGLQPMLDVPIYG
Sbjct: 1   MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTAQGLQPMLDVPIYG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
           RIATLELFRPHGEAQDFLFIATERYKFCVLQWD ESSELITRAMGDVSDRIGRPTD+GQI
Sbjct: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDTESSELITRAMGDVSDRIGRPTDSGQI 120

Query: 121 GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL 180
           GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC++PTIVVL
Sbjct: 121 GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVL 180

Query: 181 YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
           YQDNKDARHVKTYEV LKDKDFVEGPWSQNNLDNGA +LIPVPPPLCGV+IIGEETIVYC
Sbjct: 181 YQDNKDARHVKTYEVVLKDKDFVEGPWSQNNLDNGAAVLIPVPPPLCGVIIIGEETIVYC 240

Query: 241 SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300
           SA AFKAIP+RPSIT+AYGRVDADGSRYLLGDHAGLLHLLVITHEKE+VTGLKIELLGET
Sbjct: 241 SATAFKAIPVRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKERVTGLKIELLGET 300

Query: 301 SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
           SIASTISYLDNA VYIGSSYGDSQL+KLN+QPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301 SIASTISYLDNAFVYIGSSYGDSQLVKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 361 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
           RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
Sbjct: 361 RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420

Query: 421 FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
           FISETRILAMNLEDELEETEIEGF SQ QTLFCHDA++NQLVQVTS SVRLVSST+REL 
Sbjct: 421 FISETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELL 480

Query: 481 NEWKSPPGYSVNVATANASQVL 502
           NEW +P  YS+NVATANASQ +
Sbjct: 481 NEWNAPSNYSINVATANASQCI 502


>gi|41055225|ref|NP_956920.1| DNA damage-binding protein 1 [Danio rerio]
 gi|34784892|gb|AAH56837.1| Zgc:63840 [Danio rerio]
          Length = 897

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/896 (52%), Positives = 633/896 (70%), Gaps = 56/896 (6%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
           +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+ +T +GL+P+ +V +YG+IA
Sbjct: 3   YNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYAVTAEGLRPVKEVGMYGKIA 62

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
            +ELFRP GE++D LFI T +Y  C+L++    +S ++ITRA G+V DRIGRP++ G IG
Sbjct: 63  VMELFRPKGESKDLLFILTAKYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
           I+DP+CR+IGL LYDGLFKVIP D + +  +AFNIRLEELQV+D++FLYGC  PT+  +Y
Sbjct: 123 IVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVQFLYGCQAPTVCFIY 182

Query: 182 QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
           QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y +
Sbjct: 183 QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHN 241

Query: 242 ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG------- 291
            + + A+    I+ S    + RVD +GSRYLLGD  G L +L++  EKE++         
Sbjct: 242 GDKYLAVAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLL--EKEELMDGAVVLKD 299

Query: 292 LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
           L +ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV V+E + NLGPI
Sbjct: 300 LHVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVGVMETFTNLGPI 359

Query: 352 VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD 411
           VD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS +  
Sbjct: 360 VDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESSR 419

Query: 412 PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             D  LV+SF+ +TR+L ++ E E+EETE++GF    QT FC +  + QL+Q+TS SVRL
Sbjct: 420 DTDDMLVLSFVGQTRVLMLSGE-EVEETELQGFVDNQQTFFCGNVAHQQLIQITSVSVRL 478

Query: 472 VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
           V+  S+ L +EWK P G +++VA+ N +QV+LA G   L YL+I  G L ++   ++E+E
Sbjct: 479 VTQDSKALVSEWKEPQGRNISVASCNNTQVVLAVGR-VLYYLQILSGELKQISSTEMEHE 537

Query: 532 ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
           ++CLDI P+GE  + S I AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FE
Sbjct: 538 VACLDITPLGERTADSCICAVGLWTDISARLLKLPCFTPLHKEMLGGEIIPRSILMTTFE 597

Query: 592 GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
           G  YLLCALGDG L  F L+++TG L++RKKV+LGTQP  LRTF S +T++VFA SDRPT
Sbjct: 598 GSHYLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPT 657

Query: 652 VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
           VIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL
Sbjct: 658 VIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPL 717

Query: 712 GEHPRRICHQEQSRTFAICSLK-------------------------------------- 733
            E P+RIC+QE S+ F + S +                                      
Sbjct: 718 YESPKRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALSSSVSSSKLLPSSTSP 777

Query: 734 -NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
              S  EE E+H + ++D  TFE +  +     EY  S++SC    D  VY+ VGTA V 
Sbjct: 778 HETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGTAMVY 837

Query: 793 PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
           PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W
Sbjct: 838 PEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEW 893


>gi|119594340|gb|EAW73934.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_b [Homo
            sapiens]
          Length = 923

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/929 (51%), Positives = 632/929 (68%), Gaps = 64/929 (6%)

Query: 218  LLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHA 274
            ++I VP P  G +IIG+E+I Y + + + AI    I+ S    + RVD +GSRYLLGD  
Sbjct: 1    MVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDME 60

Query: 275  GLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN 329
            G L +L++  E++      +  L++ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN
Sbjct: 61   GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLN 120

Query: 330  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 389
            +  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+
Sbjct: 121  VDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIH 180

Query: 390  EQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 449
            E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ GF    Q
Sbjct: 181  EHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQ 239

Query: 450  TLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 509
            T FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++A G   
Sbjct: 240  TFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA- 298

Query: 510  LVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLN 569
            L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI  LP   
Sbjct: 299  LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 358

Query: 570  LITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
            L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV+LGTQP
Sbjct: 359  LLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQP 418

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
              LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A 
Sbjct: 419  TVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALAN 478

Query: 690  EGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------------- 733
               LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +                
Sbjct: 479  NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPS 538

Query: 734  -----------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCS 770
                                     S  EE E+H + ++D  TFE +  +     EY  S
Sbjct: 539  ASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALS 598

Query: 771  ILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 830
            ++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  
Sbjct: 599  LVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVE 658

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
            FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ 
Sbjct: 659  FNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVL 714

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 950
            LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  
Sbjct: 715  LLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQH 774

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 1009
            L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL    Y  L
Sbjct: 775  LQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLL 834

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
              +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   
Sbjct: 835  LDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVAN 894

Query: 1070 MN----------VSVEELCKRVEELTRLH 1088
            +            + ++L K VEELTR+H
Sbjct: 895  LQYDDGSGMKREATADDLIKVVEELTRIH 923


>gi|1399512|gb|AAC47162.1| repE [Dictyostelium discoideum]
          Length = 1139

 Score =  937 bits (2423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/1142 (43%), Positives = 723/1142 (63%), Gaps = 114/1142 (9%)

Query: 49   GLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVS 108
            GL+PM DV IYGRI+ L+LF   G  QD+LFI+TE +KFC+L +D E  E+IT+A G+  
Sbjct: 5    GLKPMFDVNIYGRISVLKLFSVAGSKQDYLFISTESFKFCILAYDYEKKEIITKASGNAE 64

Query: 109  DRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQL------------------ 150
            D IGRPT+ GQ+GIIDPD R++ LHLY+GL K+I  DN                      
Sbjct: 65   DTIGRPTEAGQLGIIDPDGRIVALHLYEGLLKLITLDNNNTPNKINNNNNNNNNNNNNNN 124

Query: 151  ------------------------KEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKD 186
                                    K   N+RLEELQVLD+ FLYGC  PTI VL++D KD
Sbjct: 125  NNNNNNINNNNFNINNNNNNSPIQKNVNNVRLEELQVLDMTFLYGCKVPTIAVLFKDTKD 184

Query: 187  ARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFK 246
             +H+ TYE++ KD + V GPWSQ+N+   + LL+PVP  L GVL++ +  I Y +    +
Sbjct: 185  EKHISTYEISSKDTELVVGPWSQSNVGVYSSLLVPVP--LGGVLVVADNGITYLNGKVTR 242

Query: 247  AIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTI 306
            ++ +  +   A+ RVD DGSR+L GDH G L +LV+ H+++KV  LK E LG  SI S+I
Sbjct: 243  SVAVSYTKFLAFTRVDKDGSRFLFGDHFGRLSVLVLIHQQQKVMELKFEQLGRISIPSSI 302

Query: 307  SYLDNAVVYIGSSYGDSQLIKLNLQPD-AKGSYVEVLERYVNLGPIVDFCVVDLERQGQG 365
            SYLD+ VVYIGSS GDSQLI+LN + D    SYV  LE + N+GP+VDFCVVD E+QGQ 
Sbjct: 303  SYLDSGVVYIGSSSGDSQLIRLNTEKDQTTDSYVTYLEAFTNIGPVVDFCVVDAEKQGQA 362

Query: 366  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------------------- 405
            Q+VTCSG Y+DGSLRI+RNGIGI EQAS+EL+GIKG++ +                    
Sbjct: 363  QIVTCSGTYRDGSLRIIRNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNN 422

Query: 406  -RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH--DAIYNQLV 462
              +   D  D +L+ SFI  T++L+    +E+EETE EG  S   TL+C   D + N L+
Sbjct: 423  NSNGITDSKDRYLITSFIECTKVLSFQ-GEEIEETEFEGLESNCSTLYCGTIDKL-NLLI 480

Query: 463  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI--GDGIL 520
            Q+T+ S+ L+ S + +  ++W   P   +N+ + N  Q++L+     L+Y +I   +  +
Sbjct: 481  QITNVSINLIDSNTFKRVSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQINSSNKSI 539

Query: 521  TEVKHAQLEYEISCLDINPIGE-NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
              VK  +L +EISC+DI+P      + SQ+ +VG+W DI++RIF LP L  I KE LGGE
Sbjct: 540  QLVKEIELPHEISCIDISPFDSFMDTKSQLVSVGLWNDITLRIFKLPTLEEIWKEPLGGE 599

Query: 580  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
            I+PRS+L+ +F+ I Y+ C+LGDGHL  F  +  + +L D++K++LGTQPI L+ F  KN
Sbjct: 600  ILPRSILMISFDSIDYIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKN 659

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
            T ++FA SDRPTVIYS NKKL YS VNLK+V+++  FNS  FP+S+AIA    LTIGTID
Sbjct: 660  TINIFAISDRPTVIYSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTID 719

Query: 700  DIQKLHIRSIPLGEH-PRRICHQEQSRTFAICSLKNQS---------CAEESEMHFVRLL 749
            +IQKLHI++IPL E   RRI H E    +A+ ++KN           C E+ E+ ++R+ 
Sbjct: 720  EIQKLHIKTIPLNEEMGRRIVHLEDHSCYAVITVKNNEGLLGGAQDLCEEDEEVSYIRIY 779

Query: 750  DDQTFEFISTYPLDTFEYGCSILSCSFS-DDSNVYYCVGTAYVLPEENEPTKGRILVFIV 808
            +DQTFE IS+Y LD +E G SI  C F+ DD N Y  VGT+   P +   + GR+L+F +
Sbjct: 780  NDQTFELISSYKLDPYEMGWSITPCKFAGDDVNTYLAVGTSINTPIK---SSGRVLLFSL 836

Query: 809  -----------------------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 845
                                    +GKL L+ E + + +VY L +FNG+L+AA+++++  
Sbjct: 837  SSSSSSNDKDSLDNNNNNNNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIAAVHKRLFS 896

Query: 846  YKWM-LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             ++   ++   + + SE  H GH + L + +RG FI+VGD+MKS+SLL+ +  +G++E+ 
Sbjct: 897  IRYTHSKEKNCKVISSESVHKGHTMILKLASRGHFILVGDMMKSMSLLV-EQSDGSLEQI 955

Query: 905  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
            AR+    W+ +V +++DD ++GAE + N   V+KN++   + ER  L+ VG YH+GE +N
Sbjct: 956  ARNPQPIWIRSVAMINDDYFIGAEASNNFIVVKKNNDSTNELERELLDSVGHYHIGESIN 1015

Query: 965  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 1024
              RHGSLV RLPDSD   IPT+++ +VNG IGV+AS+  E ++F  KLQ  L +V++GVG
Sbjct: 1016 SMRHGSLV-RLPDSDQPIIPTILYASVNGSIGVVASISEEDFIFFSKLQKGLNQVVRGVG 1074

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            G +HE WR+F+N+  T+D+KNF+DGDLIE+FLDL      +    + ++ ++  +R+E L
Sbjct: 1075 GFSHETWRAFSNDHHTIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDAFRRIESL 1134

Query: 1085 TR 1086
             +
Sbjct: 1135 MQ 1136


>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
            occidentalis]
          Length = 1154

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/1169 (43%), Positives = 716/1169 (61%), Gaps = 101/1169 (8%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NY+VTAHKPT VT    GNFT+P + NLI+AK TR+EI  +T +GL+P+ +V IYGRI+
Sbjct: 3    YNYIVTAHKPTAVTGCLTGNFTTPTDRNLIVAKNTRLEILTITEEGLKPIKEVNIYGRIS 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSE---LITRAMGDVSDRIGRPTDNGQI 120
             ++ FR   E++D LF  T++Y   +L++ AESSE   +ITR+ G VSD   RP++ G +
Sbjct: 63   VMKKFRYPNESKDLLFFLTDKYNVAILEFSAESSENFEVITRSHGCVSDPYARPSEAGNL 122

Query: 121  GIID-PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVV 179
             ++D P  R+I L LYDGL K+IP + + +   ++NIR+EE Q+ D+ FL   +   ++ 
Sbjct: 123  VVVDQPKARVIALRLYDGLLKMIPLNREAKELRSYNIRVEEAQITDMCFLSSSSSDPVLA 182

Query: 180  LYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
            +  + +  RH+KT+ +AL+DK+ ++GPW Q NLD  AD+LIPV     GV+I+G ETIVY
Sbjct: 183  IVYEEQQTRHMKTHVIALRDKELMKGPWGQRNLDLEADMLIPVEDTETGVIIVGGETIVY 242

Query: 240  CSANAFKAIPIRPSITKA-----YGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKI 294
                 +  I I+PS  +      Y R+D +   ++LG   G L +L +  E +KV    +
Sbjct: 243  HYGQDY--ICIQPSFLRTTKISCYCRIDNNRLVFILGGICGRLFILTLRRENKKVVSHSL 300

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            +LLG  SI   +SYLDN VV++GS  GDSQLI+++    A+  ++EVLE Y NLG I+D 
Sbjct: 301  DLLGSVSIPECLSYLDNGVVFVGSRLGDSQLIRMH----AQEPFIEVLESYTNLGAILDM 356

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST----- 409
             VVDLE+QGQ Q++TCSG    GSLRI+RNGIGI+E A VEL GIKG+W+LR +T     
Sbjct: 357  IVVDLEKQGQDQLITCSGQGACGSLRIIRNGIGIHELACVELSGIKGIWALRMNTAQLEE 416

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEI-EGFCSQTQTLFCHDAIYNQLVQVTSGS 468
            D P D  LV+SF+ +TR+   +  +ELE+  +   F   +QT    + + NQ++QVT   
Sbjct: 417  DTPTDDTLVLSFVGQTRVFNCSSTEELEQVTLPAAFDIDSQTFCARNVLGNQVIQVTDKR 476

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL 528
            V L+S TS+   ++W  P G  +     N  QV LA     LVYLEI DG LTE+K  +L
Sbjct: 477  VNLISVTSKTRVDQWFPPEGEIITQCACNDVQVALALKNV-LVYLEIRDGSLTEIKRTRL 535

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLC 588
            EYEI+C+D+N + +    + I  VG+WTD+S+ + SLPDL  + ++ L  ++IPRSVL  
Sbjct: 536  EYEIACMDLNTLDKEGDQTSIITVGLWTDVSILVLSLPDLEQLFRQELPKDVIPRSVLKI 595

Query: 589  AFEGIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
             FEG + YLLC L DG L  + L   TGELT +K+V+LGTQP TLR F S+ T  VFA S
Sbjct: 596  TFEGSTDYLLCTLADGSLFYYHL-ASTGELTGQKRVTLGTQPTTLRKFRSQRTWSVFACS 654

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 707
            DRPTVIYSS  KL++S VNL+EV HMC F+S AFPDSLA+A E E  IGTID IQKLHIR
Sbjct: 655  DRPTVIYSSTSKLVFSKVNLREVKHMCSFSSEAFPDSLALASEDEFVIGTIDAIQKLHIR 714

Query: 708  SIPLGEHPRRICHQEQSRTFAI--------CSLKNQS----------------------- 736
            ++PLGE PRRI +QE++ TF +        CS +  S                       
Sbjct: 715  TVPLGESPRRIAYQEETGTFGVIVSRSDMACSTRCASLDAPNKSNASPYAWHKDFSSFGH 774

Query: 737  --CAEE--------------------SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC 774
              CA+                      E   + ++D  TFE +        EYG SI S 
Sbjct: 775  TQCADRVDSGIPSCSSTSLQRPPSGCDETFSLLIIDQNTFEVLHAMQFCPNEYGVSICSA 834

Query: 775  SFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 834
                D N YY VGTA++  EE+EP  GRI V    DGKL+ IAEKE  GA YS+  F+ K
Sbjct: 835  KLGSDPNPYYIVGTAFINQEESEPKVGRIFVLRWHDGKLETIAEKEAAGAPYSIREFHQK 894

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
            L  AIN  ++LY W    +  ++LQSEC    +I+ L+++  GD+I+VGDLM+S++LL Y
Sbjct: 895  LAIAINSTVRLYSW----NAEKDLQSECTPFFNIVILHLKCLGDYILVGDLMRSMTLLNY 950

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
              +  ++EE  RDY  NW +AVEILD+D +L AE+N NL+  +++   A D+ R  +  V
Sbjct: 951  NADITSLEEIGRDYQTNWTTAVEILDEDTFLAAESNLNLYVCKRDPSAA-DDTRQHMHEV 1009

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIP-----TVIFGTVNGVIGVIASLPHEQYLFL 1009
              YHLGE VN    GSLVM  P    G +P     + ++G+++G +GVI  +  E Y  L
Sbjct: 1010 ALYHLGEMVNVIVKGSLVMAQP----GDMPLPLNKSFLYGSLHGAVGVIVPIKQELYAIL 1065

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
             ++QTNL K IK VG + H  WR+F  E+K   A  F+DGDLIE  LDL +  ++ +S++
Sbjct: 1066 NQIQTNLAKTIKSVGKIEHGFWRTFLAERKIEPATGFIDGDLIEQLLDLPKEALESVSQS 1125

Query: 1070 M----------NVSVEELCKRVEELTRLH 1088
            +          N++ E+L K VE+LTR+H
Sbjct: 1126 IKVDEEGGHQRNMTPEDLVKLVEDLTRIH 1154


>gi|194389106|dbj|BAG61570.1| unnamed protein product [Homo sapiens]
          Length = 1009

 Score =  927 bits (2397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/916 (51%), Positives = 623/916 (68%), Gaps = 64/916 (6%)

Query: 231  IIGEETIVYCSANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
            IIG+E+I Y + + + AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++
Sbjct: 100  IIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQ 159

Query: 288  -----KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVL 342
                  +  L++ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +
Sbjct: 160  MDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAM 219

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGM 402
            E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+
Sbjct: 220  ETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGL 279

Query: 403  WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV 462
            W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ GF    QT FC +  + QL+
Sbjct: 280  WPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNVAHQQLI 338

Query: 463  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTE 522
            Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++A G   L YL+I    L +
Sbjct: 339  QITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQ 397

Query: 523  VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 582
            + H ++E+E++CLDI P+G++   S + A+G+WTDIS RI  LP   L+ KE LGGEIIP
Sbjct: 398  ISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIP 457

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
            RS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+
Sbjct: 458  RSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTN 517

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ 702
            VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQ
Sbjct: 518  VFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQ 577

Query: 703  KLHIRSIPLGEHPRRICHQEQSRTFAICSLK----------------------------- 733
            KLHIR++PL E PR+IC+QE S+ F + S +                             
Sbjct: 578  KLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQGTSGGTTALRPSASTQALSSSVSSS 637

Query: 734  ----------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 783
                        S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y
Sbjct: 638  KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTY 697

Query: 784  YCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            + VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  +
Sbjct: 698  FIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTV 757

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
            +LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE
Sbjct: 758  RLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEE 813

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFV 963
             ARD+N NWMSAVEILDDD +LGAEN FN F  +K+S   TDEER  L+ VG +HLGEFV
Sbjct: 814  IARDFNPNWMSAVEILDDDNFLGAENAFNSFVCQKDSAATTDEERQHLQEVGLFHLGEFV 873

Query: 964  NRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 1022
            N F HGSLVM+ L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK 
Sbjct: 874  NVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKS 933

Query: 1023 VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------V 1072
            VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            
Sbjct: 934  VGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREA 993

Query: 1073 SVEELCKRVEELTRLH 1088
            + ++L K VEELTR+H
Sbjct: 994  TADDLIKVVEELTRIH 1009



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 7/118 (5%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
           +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQW-------DAESSELITRAMGDVSDRIGRP 114
            +ELFRP GE++  LFI T +Y  C+L++       D    E IT   GD    I  P
Sbjct: 63  VMELFRPKGESKGLLFILTAKYNACILEYKQSGESIDIIGQESITYHNGDKYLAIAPP 120


>gi|290998415|ref|XP_002681776.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
 gi|284095401|gb|EFC49032.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
          Length = 1103

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/1114 (43%), Positives = 725/1114 (65%), Gaps = 45/1114 (4%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NYV  A+KPT +  S  GNFTSP ++NLI+ K   ++++ L+ +G+  +++    GRI 
Sbjct: 3    FNYVSYAYKPTTIGCSASGNFTSPSDINLIMCKNQYLQVNRLSEEGVSSVVEFEAPGRID 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            T+ LFRP GE QD LFI  E   F +   D +   + T + G + D +GR +++G I  I
Sbjct: 63   TMSLFRPSGEKQDLLFITIEDTFFTLGFIDGK---IETLSSGSIDDPVGRRSESGSITTI 119

Query: 124  DPDCRLIGLHLYDGLFKVIPFDN-KGQLKEAFNIRLEELQVLDIKFLYGCAK-----PTI 177
            DP CR + L +Y+GL K+IPF+N K Q KEAFN+RLEEL V+DI FL          PT 
Sbjct: 120  DPLCRAVALSIYEGLLKIIPFENNKHQFKEAFNVRLEELNVIDIAFLESLGSKSKSGPTF 179

Query: 178  VVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETI 237
             +LYQD+  +RHVKTYEV   DKD  E   +Q N+D+GA++LIPVP PL GV+ +GE  +
Sbjct: 180  ALLYQDHVGSRHVKTYEVKTLDKDMEESSLNQLNVDHGANILIPVPAPLGGVICVGEAQV 239

Query: 238  VY---CSANAFKAIPIRPSIT-KAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLK 293
             Y    + N   A P    +  ++YG++D   +R+ LGD +G L+LL +     +VTGL 
Sbjct: 240  SYINESNKNHSVASPANSRMAIRSYGKLD--NTRWFLGDQSGQLYLLSLQVSDSEVTGLT 297

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN--LQPDAKGSYVEVLERYVNLGPI 351
            ++ LG TSI+S ISYLDN  V+IGS+YGDSQ+I+++  L P+   SY EV + Y N+GPI
Sbjct: 298  LKELGVTSISSCISYLDNGYVFIGSNYGDSQVIRISDELNPETN-SYFEVFQTYSNIGPI 356

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTD 410
            VDFC VD ++QGQGQ+VTCSGA+KDGSLRI++NGIGI E  ++ +L G+  +WSL++ T 
Sbjct: 357  VDFCFVDADKQGQGQIVTCSGAFKDGSLRIIKNGIGIEELTTISDLVGLNRIWSLKTETG 416

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            +  + +LV+SF  +T I +++ E E+ E +I GF   + T+ C   I N  +QVT  + R
Sbjct: 417  E--EKYLVMSFTGQTLISSVDNE-EIGEAKIPGFDVDSTTVLCDTVIGNNYLQVTDKTAR 473

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY 530
            LVSS + EL +EWK P   ++++A +N +Q++++ G G LVY+EI    L +++  +L+Y
Sbjct: 474  LVSSHTLELIDEWK-PSSGTISLAASNPTQLVVSLGEGKLVYIEISAQSLKQIQQTKLDY 532

Query: 531  EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAF 590
            E+SC+DI+P  E    S + AVGMWT+ISVR+ +LP  +++T + LGGEI+PRS+L+  F
Sbjct: 533  EVSCIDISP-EEGKISSTVCAVGMWTEISVRVLTLPSFDILTVQELGGEILPRSILMPTF 591

Query: 591  EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDR 649
            EGI+YL+C LGDGHL  F ++   G LTD+K++  G++PI LR F SK+   +VFAAS+R
Sbjct: 592  EGINYLMCGLGDGHLFTFKMDRGMGILTDKKRIVAGSKPIMLRPFISKDRQLNVFAASER 651

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI 709
            PT+IYS N+KL+YSNVNL EV+ MC FN  +FP  +AIA E  + IG ID+IQKLHI+++
Sbjct: 652  PTIIYSRNQKLVYSNVNLGEVNDMCSFNHESFPFHIAIANENSILIGQIDEIQKLHIKTV 711

Query: 710  PLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC 769
             L   P +ICHQ  ++ + +   +     E  E   +  LD+  FE  S   L+  E G 
Sbjct: 712  QLHAQPTKICHQPSTKAYGLLITQ----FENPETSAIFSLDENNFEKKSEIRLEGNELGQ 767

Query: 770  SILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 829
            SI+SC F+DD N Y+ VGTA    +E EP+KGRILV  V+D KL L AEK+ KGAV  L+
Sbjct: 768  SIISCKFTDDDNEYFIVGTAITEGDEEEPSKGRILVLQVQDDKLVLKAEKDVKGAVMVLH 827

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDG-TRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
            +FNGKLLA ++ ++ L+KW   DDG  ++L  EC   G I  L + + GDFI++GD+MKS
Sbjct: 828  SFNGKLLAGVSGRLMLFKWAESDDGDNKDLVQECSCSGGIYILDIDSHGDFILIGDMMKS 887

Query: 889  ISLLIY-----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 943
            + L +Y     +H  G +   ++DY  +W+S   +L++  Y+  +   N+ T++KN E A
Sbjct: 888  VHLFVYENPEEQHVSGNLRLISKDYQYSWLSCSLMLNESEYVAVDQQGNMITLKKNDEAA 947

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--SDVGQIP--TVIFGTVNGVIGVIA 999
            ++EER +L  VG+Y+  + VNR + G + MR  +  SD+   P  T +FGT++G IGV+A
Sbjct: 948  SEEERKQLVRVGKYYCSDRVNRIQPGFIGMRFANSSSDINTQPVKTALFGTISGGIGVLA 1007

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL- 1058
             LP E + F+ K+Q  +  V+ G+  ++ E +R + +E+   D+  F+DGD +ESFL+  
Sbjct: 1008 QLPPETFAFVTKIQKAMSSVVTGLANISRETYRQYRSERTREDSVGFIDGDFVESFLEFD 1067

Query: 1059 ---SRTRMDEISKTM--NVSVEELCKRVEELTRL 1087
                +  ++E+S      +++EEL K +E+L+ L
Sbjct: 1068 FETQQRVIEELSNNHQEQITLEELVKNIEDLSHL 1101


>gi|119594343|gb|EAW73937.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_e [Homo
            sapiens]
          Length = 896

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/886 (52%), Positives = 608/886 (68%), Gaps = 61/886 (6%)

Query: 258  YGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDNA 312
            + RVD +GSRYLLGD  G L +L++  E++      +  L++ELLGETSIA  ++YLDN 
Sbjct: 17   HNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG 76

Query: 313  VVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSG 372
            VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSG
Sbjct: 77   VVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSG 136

Query: 373  AYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNL 432
            A+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N 
Sbjct: 137  AFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNG 196

Query: 433  EDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
            E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++
Sbjct: 197  E-EVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNIS 255

Query: 493  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAV 552
            VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+
Sbjct: 256  VASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAI 314

Query: 553  GMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM 612
            G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN+
Sbjct: 315  GLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 374

Query: 613  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 672
            +TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++
Sbjct: 375  ETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNY 434

Query: 673  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL 732
            MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S 
Sbjct: 435  MCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSS 494

Query: 733  K---------------------------------------NQSCAEESEMHFVRLLDDQT 753
            +                                         S  EE E+H + ++D  T
Sbjct: 495  RIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHT 554

Query: 754  FEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKL 813
            FE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKL
Sbjct: 555  FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKL 614

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV 873
            Q +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY+
Sbjct: 615  QTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYL 670

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            +T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNL
Sbjct: 671  KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNL 730

Query: 934  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVN 992
            F  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVN
Sbjct: 731  FVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVN 790

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
            G+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLI
Sbjct: 791  GMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLI 850

Query: 1053 ESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 1088
            ESFLD+SR +M E+   +            + ++L K VEELTR+H
Sbjct: 851  ESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 896


>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 953

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/1018 (47%), Positives = 651/1018 (63%), Gaps = 135/1018 (13%)

Query: 140  KVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKD 199
            K+IP D   +  +A+NIRLEELQV+D+ FLYGC  PT+  +YQD +  RHVKTYEV+L D
Sbjct: 2    KMIPLDGDNREWKAYNIRLEELQVIDVHFLYGCQAPTVCFIYQDPQ-GRHVKTYEVSLAD 60

Query: 200  KDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITK 256
            K+F +GPW Q N++  A ++IPVP P  G +IIG+E+I Y + + + AI    I+ S   
Sbjct: 61   KEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIV 120

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG-------LKIELLGETSIASTISYL 309
             + RVD +GSRYLLGD  G L +L++  EKE++         L +ELLGETSIA  ++YL
Sbjct: 121  CHNRVDPNGSRYLLGDMEGRLFMLLL--EKEELMDGTVALKDLHVELLGETSIAECLTYL 178

Query: 310  DNAVVYIGSSYGDSQLIK---------LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            DN VV++GS  GDSQL+K         LN+  + +GS+V V+E + NLGPIVD CVVDLE
Sbjct: 179  DNGVVFVGSRLGDSQLVKVRVTHSLSELNVDSNDQGSFVTVMETFTNLGPIVDMCVVDLE 238

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420
            RQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LRS      D  LV+S
Sbjct: 239  RQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLS 298

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            F+ +TR+L ++ E E+EETE+ GF    QT +C +  +NQL+Q+TSGSVRLV   S+ L 
Sbjct: 299  FVGQTRVLMLSGE-EVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVRLVLQDSKALV 357

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI 540
            +EW+ P G +++VA  N +QV+LA G   L YL+I  G L ++   ++E+E++CLDI P+
Sbjct: 358  SEWREPQGRNISVAACNHTQVVLAVGRA-LYYLQILAGELKQISTTEMEHEVACLDITPL 416

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
            GE  + S + AVG+WTDIS R+  LP    + KE LGGEIIPRS+L+  FEG  YLLCAL
Sbjct: 417  GEAGAESPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSYYLLCAL 476

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
            GDG L  F L+++TG L++RKKV+LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL
Sbjct: 477  GDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKL 536

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            ++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PRRIC+
Sbjct: 537  VFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICY 596

Query: 721  QEQSRTFAICSLKNQ---------------------------------------SCAEES 741
            QE S+ F + S + +                                       S  EE 
Sbjct: 597  QEVSQCFGVLSSRMEIQDVSGTTSPVRPSASTQALSSSVSSSKLFPSSTSPHESSFGEEV 656

Query: 742  EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 801
            E+H + ++D  TFE +  +     EY  S++SC    D ++         +P E      
Sbjct: 657  EVHNLLVVDQHTFEVLHAHQFLPSEYALSLVSCRLGKDPSL-------QTIPNE------ 703

Query: 802  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
               VF                                   +++LY+W       +EL++E
Sbjct: 704  --CVF-----------------------------------QVRLYEWT----AEKELRTE 722

Query: 862  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 921
            C H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSA+EILDD
Sbjct: 723  CNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAIEILDD 782

Query: 922  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDV 980
            D +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLV++ L ++  
Sbjct: 783  DNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGETST 842

Query: 981  GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 1040
                +V+FGTVNG+IG++ SL    Y  L  LQ  L KVIK         WRSF+ E+KT
Sbjct: 843  PTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKTT-------WRSFHTERKT 895

Query: 1041 VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 1088
              A  F+DGDLIESFLDL R +M E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 896  EQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH 953


>gi|340381612|ref|XP_003389315.1| PREDICTED: DNA damage-binding protein 1-like [Amphimedon
            queenslandica]
          Length = 1142

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/1153 (41%), Positives = 712/1153 (61%), Gaps = 81/1153 (7%)

Query: 4    WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +NY+VTAHK T V  S  GNFT P +LNLI AK + + + L+T +GL+P+LDV ++GRI 
Sbjct: 3    YNYIVTAHKATAVPLSVTGNFTGPDDLNLIQAKGSNLAVSLVTSEGLKPVLDVDVFGRIL 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             ++LFRP GE  D LFI T RY   ++ +D  +++++TRA GD+ +R+G+PT    + ++
Sbjct: 63   AIQLFRPQGERMDLLFILTARYHVAIVGYDPIANDVLTRAYGDIKERVGKPTLGKNVAMV 122

Query: 124  DPDCRLIGLHLYDGLFKVIP--FDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            DP C+LI LHLY G  K++P  FD+   LK AFNIRLE+L + DI+FL+G   PTI  + 
Sbjct: 123  DPSCQLIALHLYTGQLKIVPLQFDSGSPLK-AFNIRLEDLYITDIQFLHGTENPTIAYIS 181

Query: 182  QDNKDA--RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
            ++   A  R +KT+ ++ +DK+ + GPW  N ++  A LL  VP P  G++++G +++ Y
Sbjct: 182  EEPSVATGRVLKTFVISQRDKELLPGPWKPNTIEGQASLLCSVPSPYNGLIVVGADSVAY 241

Query: 240  C--SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGL----- 292
               +++    I I+ S+      +D   SRYLLGD  G L  L +   +E  +G+     
Sbjct: 242  FNDTSHTVDPIVIKESVISCIEPLDH--SRYLLGDFRGRLLTLFLEFSEEMESGMTNIVN 299

Query: 293  -KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
             K+E+LGE SI  T+SYLDN VV++GS+ GDSQL+KL+  P   G Y++VLE   N+GPI
Sbjct: 300  MKLEVLGEISIPHTLSYLDNGVVFVGSTKGDSQLVKLSSSPLENGGYIDVLESMTNIGPI 359

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR-SSTD 410
            +D  VVDL++QG+  +V CSG  KDG+LRIV++GIGINE AS++L GIKG+WSL+ +  +
Sbjct: 360  LDMSVVDLDKQGRDVLVCCSGLGKDGALRIVKSGIGINEAASIDLPGIKGIWSLKCAGRE 419

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D  D  +V++F+ +T  L +  E E+EETE+    +  QT +C +   N ++Q+T+ SVR
Sbjct: 420  DELDDTVVLTFVGQTMALRLAGE-EVEETELPALVTDQQTFYCSNVTGNAIIQITTKSVR 478

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTE---VKHAQ 527
            L+   + EL  +W  P G  ++ A  N+SQV++A G   L YLE+  G   E   + H  
Sbjct: 479  LMDDKAMELICDWSPPDGRGISTAACNSSQVMVAVGC-DLYYLEVKPGSPGELLLISHTT 537

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLL 587
            + +E++CLDINP+ E  + S + AVG+WTDISV+I ++P    +  + LGG+IIPRSVL+
Sbjct: 538  MSHEVACLDINPLSEAGT-SSLCAVGLWTDISVQILNVPQFEHLFTQPLGGDIIPRSVLM 596

Query: 588  CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
                G  YLLCALGDG L  + ++ +TG+L   K+V LGT+PI L+ F S   T VFA S
Sbjct: 597  VELGGACYLLCALGDGCLHYYTMDSETGQLRGGKRVVLGTKPIVLKQFKSDGVTSVFACS 656

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 707
            D PT+I+ SN+KLL+SNVN+KEV+++C  NS AF +SLA+     L  G +D IQ LHI 
Sbjct: 657  DHPTIIHFSNQKLLFSNVNVKEVNYICTLNSEAFQNSLALVDSSTLIFGCVDQIQMLHIE 716

Query: 708  SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES-------------------------- 741
            +IPLGE PR I +QE S+TF +   +      ++                          
Sbjct: 717  TIPLGESPRCIAYQESSQTFLVGGYRTDKSGPDNTYTPSRQSVSTRTSNVSVAVVPPQLN 776

Query: 742  ---------EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--DDSNVYYCVGTAY 790
                     EMH + L D  TF+    Y L   E+   + SC+ +  D+    Y VGTA 
Sbjct: 777  IEEFKCPQVEMHSLILFDQTTFDVSHVYQLCPQEHILCVTSCNLTTNDEERSVYVVGTAL 836

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V PEE E + GRILVF V  GKL+L+ EK   GAV+ +  FNGK+L ++N  + +   + 
Sbjct: 837  VKPEEKESSTGRILVFAVNSGKLELLHEKLENGAVFQVLGFNGKILNSVNSGVFVNALV- 895

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
              DG   L+ EC +  +ILALY++T+GDFI+VGD+++S+ LL+YK E G +EE   D+N 
Sbjct: 896  --DGA--LKEECAYKNNILALYLKTKGDFILVGDILRSLKLLVYKEELG-LEEIGVDHNI 950

Query: 911  N--WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH 968
            +  + +A+E++DD+ YLGA+   ++F  +KN+E  ++ +   +      + G+ VN F  
Sbjct: 951  SPCFCTAIEMIDDENYLGADGR-HIFICQKNTEATSEADLLYMVQPSRMYFGDNVNVFSR 1009

Query: 969  GSLVMRLPD---SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 1025
            GS VM  P    S + Q   ++FGTV+G IG+I +L  + Y  L KLQ  +   IK VG 
Sbjct: 1010 GSFVMDHPGAGASSLLQGKPILFGTVHGAIGLIGTLNMDTYTLLSKLQQKMAANIKSVGN 1069

Query: 1026 LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVE 1075
            + HE +RSF+NE ++     F+DGDL+E FL+L R +M +I + +          +VSV+
Sbjct: 1070 IEHEIYRSFSNEHRSKPFAGFIDGDLVEKFLELPRPQMSQIVQGIKTTDVTGTEVDVSVD 1129

Query: 1076 ELCKRVEELTRLH 1088
            ++ K +E+L+RLH
Sbjct: 1130 DILKLIEDLSRLH 1142


>gi|324502823|gb|ADY41238.1| DNA damage-binding protein 1, partial [Ascaris suum]
          Length = 1129

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/1148 (42%), Positives = 698/1148 (60%), Gaps = 86/1148 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+V+A K T VTH+ V NFT P +LNL++AK  R+E+ ++TP GL+   +VP++GRIA 
Sbjct: 4    NYIVSAQKATVVTHAVVCNFTGPNDLNLVLAKTNRLELMVVTPDGLKSYREVPVFGRIAA 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            ++ FR   E+ D + + T+++   +L WD+ + EL TRA G ++DR+GR ++ G I  + 
Sbjct: 64   VKAFRVKNESVDSILVLTQKHHLAILCWDS-NGELRTRASGHIADRVGRHSETGIIACVH 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
                L+   LYDGL KV+ +     L+  FNIR E+L ++D+ FL    KPT+V +Y+D+
Sbjct: 123  SS-GLMAFRLYDGLIKVVQWTEGSDLR-GFNIRCEDLYIVDLDFLSDPEKPTVVYIYRDH 180

Query: 185  KDARHVKTYEVALKDKDFVEGP-WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-A 242
             + RH+K   + L+DK+    P W Q+N++  A ++IP+P P  GV+++G E I Y   A
Sbjct: 181  -NGRHLKAAAINLEDKELSSPPLWKQDNIEAEACMVIPIPQPYGGVIVVGHEAISYHKDA 239

Query: 243  NAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAG-----LLHLLVITHEKEKVTGLKI 294
            NA+ AI    I  S    YG++D DG RYLLGD +G     LL L V T     V  LK+
Sbjct: 240  NAYSAIAPPLIHQSQISCYGKIDRDGQRYLLGDLSGRIFMLLLDLDVATDGTASVKDLKV 299

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            ELLGETSI   + YLDN VV+IGS +GDSQL++L  +P   GSY+ +++ YVNL PI D 
Sbjct: 300  ELLGETSIPECVVYLDNGVVFIGSRFGDSQLVRLRSEPCPDGSYISLMDTYVNLAPIRDM 359

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
             V++ +  GQ QV+TCSGA+KDGSLRI+RNGIGI E ASVEL G+K +++L   ++   D
Sbjct: 360  VVINAD--GQQQVITCSGAFKDGSLRIIRNGIGIEELASVELPGVKALFTLNVESE--LD 415

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             +LVV F+ ET IL ++ E ELE+T++ GF +  QTL+        + Q+T   V L+  
Sbjct: 416  DYLVVGFVDETHILKISGE-ELEDTQLPGFSTTEQTLWAGRVGSGGIAQITPLKVVLI-- 472

Query: 475  TSRELRNE---WKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
                LR     W+ P   SV      + QV+LA G   L YL + D I T + + + E+E
Sbjct: 473  ----LRGNTLTWEPPSRISVVSVNELSGQVVLACGN-QLHYLLLTDKI-TPITNIECEFE 526

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            I+C+D+  +G+    S++ AV  WTD+SV + SLPDLN I +E  GGE++ RS+L+C  E
Sbjct: 527  IACIDVGCVGDEIE-SKLCAVAYWTDMSVALRSLPDLNEIVREKCGGEMLARSLLICMME 585

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
            GI YLL ALGDG L  + ++M +G LT  KK +LGTQP TL+ F S+   +VFA SDRPT
Sbjct: 586  GIVYLLVALGDGTLYYYQIDMNSGALTQPKKATLGTQPTTLKKFMSRGARNVFACSDRPT 645

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            VIYSS++KL++SNVNLK V+HMC  NSA + DSL +     L IG IDDIQKLHIR++PL
Sbjct: 646  VIYSSSQKLVFSNVNLKLVAHMCALNSATYTDSLVMTDGQTLVIGRIDDIQKLHIRTVPL 705

Query: 712  GEHPRRICHQEQSRTFAICSLKNQ-----------SCA---------------------- 738
            GE   RI +Q ++ T AI   +N+            CA                      
Sbjct: 706  GESVSRIAYQPETGTIAILVQRNEFVDADGKHHCGHCASKMAVNASSSHPSVVTSATTPP 765

Query: 739  ---EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
               EE E+  V + D  T E + ++ L   E   SI SC   DD   YY VGTA VL +E
Sbjct: 766  IEPEEIEVSSVVVFDANTLEILHSHELGKNELAMSIKSCVLGDDPQPYYAVGTAVVLTDE 825

Query: 796  NEPTKGRILVFIV----EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
             E   GR+L+F V    E G+++L+ +KE KGA YS+    GKL+ AIN  ++L++W   
Sbjct: 826  TESKSGRLLIFQVAPSSEGGRMRLVHDKEIKGAAYSIQVLMGKLVVAINSCVRLFEWT-- 883

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
                +EL+ EC    ++ ALY++T+ D ++VGDLM+S+S+L YK  E + E+ ARD+  N
Sbjct: 884  --AEKELRLECSDFDNVTALYLRTKNDVVLVGDLMRSLSVLAYKPMESSFEKIARDFVTN 941

Query: 912  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 971
            WM+A EI+D + +LGAE  FNLFTV K+     +  R +L+  G Y+LGE VN F HGSL
Sbjct: 942  WMTACEIIDMETFLGAEIMFNLFTVVKDCSSKDEGIRLQLQETGMYYLGESVNAFCHGSL 1001

Query: 972  VMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
            +    D        +++GT +G +GVI  L  + Y F+ +L+T +  V K    + H Q+
Sbjct: 1002 IATHIDLTPSFTTPILYGTSDGGLGVIVQLTPQFYDFVHELETRIAAVTKNCMRIEHGQY 1061

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV-----------SVEELCKR 1080
            R+F ++ +T  +  F+DGDL+E  LD+SR  ++++   + +           ++EE+ K 
Sbjct: 1062 RTFESDGRTEQSVGFIDGDLVEGLLDMSRDSVEKLIDGLTLPAAAGQEQKVATIEEVLKV 1121

Query: 1081 VEELTRLH 1088
            VE+L R+H
Sbjct: 1122 VEDLARIH 1129


>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1098

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/1104 (40%), Positives = 685/1104 (62%), Gaps = 29/1104 (2%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKC----TRIEIHLLTPQGLQPMLDVPIYGR 61
            Y VTAHKP +V+ +   NFTS  ++NLI+       T I+ +    + L+ + DVPIYGR
Sbjct: 3    YHVTAHKPDSVSSAIRANFTSASDINLIVRMTDEFSTNIDSNPTVRKSLRLITDVPIYGR 62

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            IA +  FRP     D +F++TER    VL +D ++  L+  A GD +D   R  D GQIG
Sbjct: 63   IACIHAFRPEHRDTDLIFVSTERGSVIVLSFDQQTQRLVPEATGDFNDPSSRLADPGQIG 122

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
            ++DP  R+IGLH++ G FK+IP  +      ++N+ +   Q +  K +     PT+ VL+
Sbjct: 123  LVDPQNRMIGLHIHQGNFKIIPMFHSQISLSSWNLLVNSSQSIKGKGVARPPHPTLAVLH 182

Query: 182  QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
             D+K++R+V  YEV +K+K  V    +   ++NG+ LLIPVP    GVL++GE++I   S
Sbjct: 183  MDSKESRYVTQYEVVIKEKALVLKS-AATKVENGSSLLIPVPLAAGGVLVVGEQSIALHS 241

Query: 242  ANAFKAI--PIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
             +  K I   I+ ++ K + +VD  G RYLLGD+ G L++L I         LK+  +G+
Sbjct: 242  PSLQKPIMLSIKATLIKCFNQVDV-GFRYLLGDYEGQLYILAIIFANGTARELKMTPVGQ 300

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            T  AS+++YL +  +++ S +GDS+L  +  +    G+ + + + + NL PI DFCVVD+
Sbjct: 301  TVQASSLTYLTDGYLFVASHFGDSELYLIVPEDANTGNVLTLCKTFSNLAPISDFCVVDI 360

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLV 418
            E+QGQ Q+V CSGA +DGS+RI+RNGIG+ E   ++ ++ + G+W+L+  +    D  LV
Sbjct: 361  EKQGQAQIVACSGAQRDGSIRIIRNGIGVEEIGQLDDMEELTGVWALKPYSAARHDNVLV 420

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            +SFI ETR+  ++ +   E   +  F +  +TL+C +   + +VQ+TS S+ +++     
Sbjct: 421  LSFIGETRLQKLDGDSMAEMDMLGNFKTAERTLWCQNLSSDMVVQITSQSITILTIEGWT 480

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDIN 538
               EW    G SV  A+   + +L++ GGG +   E  D  L   +  Q++ E+SCL I 
Sbjct: 481  TVAEWCFDLGASVTHASVYQNMILVSLGGGMIHLFEFNDRELVMKRSIQIQVEVSCLHIC 540

Query: 539  PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLC 598
             + E      + AVG W D SVR+  +PDL+ I KE L G+ IPRS+LL  F+ + YLL 
Sbjct: 541  KMEELNVC--LCAVGCWEDNSVRLLKIPDLSEIQKEILPGDTIPRSILLVEFDNLPYLLV 598

Query: 599  ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 658
            +LGDG L NF +  K+ +L DRKK++L TQPITLRTF S   THVFAASDRPTVI+  + 
Sbjct: 599  SLGDGQLFNFRIG-KSLKLADRKKITLATQPITLRTFQSHGRTHVFAASDRPTVIFVKSG 657

Query: 659  KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRI 718
            +LLYSNVN++E+SH+ PFNS     +LA A +G L IGTI+ +QKLHI++I LGE PRRI
Sbjct: 658  QLLYSNVNVREISHVSPFNSHMAEGALAFASDGALKIGTIETVQKLHIKTIKLGETPRRI 717

Query: 719  CHQEQSRTFAICSL--KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 776
             + + S TF + ++  +N    + +++  +RLLD Q +E + +  L  FE   S+++  F
Sbjct: 718  AYHDVSHTFGVLTVFSRNLPNGDLADISCLRLLDGQGYEVLDSIELQPFEIASSLITIRF 777

Query: 777  SDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
            +DD  +YY VGT +  P E+EP +GRILVF V D + LQL+ E + +G+ YS  + +G+L
Sbjct: 778  TDDDTLYYTVGTGFAFPHEDEPVRGRILVFKVNDMRLLQLVHEYDIRGSAYSFVSVHGRL 837

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            +A +N  + + +W   D    ELQS   +HGH+LAL +  RGDFI+V DL+KSI+LL + 
Sbjct: 838  VAGVNSNVMVLRWN-SDTSLLELQSM--NHGHVLALSLAVRGDFILVADLIKSITLLQFD 894

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 955
                +++E A D ++NWM+A E++DDD +LGA+++ N+F + K  +  ++EER RL   G
Sbjct: 895  LATDSLKELAYDADSNWMTAAELIDDDTFLGADSSMNIFALSKQGDQVSEEERQRLRPKG 954

Query: 956  EYHLGEFVNRFRHGSLVMRLPDSDVG--QIPTVIFGTVNGVIGVIASLPHEQYL-FLEKL 1012
             +H GE +NRFR GSL +   D  +    IP +++ TV+G IGV+A +P ++    L  L
Sbjct: 955  WFHTGELINRFRKGSLTLHATDETLALPAIPEILYCTVHGAIGVVARIPSDETAKILSTL 1014

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD-------- 1064
            Q  L+ V++GVGGL H  WR +  E++++ +   +DGDLIESFL+L R+  D        
Sbjct: 1015 QEALKSVVQGVGGLIHSDWRRYRTERRSIKSAGIIDGDLIESFLELDRSMQDHVFTQVAT 1074

Query: 1065 EISKTMNVSVEELCKRVEELTRLH 1088
            +++ +  V++E L K VE+LTR+H
Sbjct: 1075 QVAGSTPVTLETLTKMVEDLTRIH 1098


>gi|393905247|gb|EJD73911.1| CPSF A subunit region family protein [Loa loa]
          Length = 1145

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/1158 (40%), Positives = 699/1158 (60%), Gaps = 90/1158 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+VTA+KPT VTH+ VG+F  P ELNL++AK  R+E+ L+TP+GL+P  + P++GRIAT
Sbjct: 4    NYIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIAT 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            ++LFR  GE  D L I T +Y   +++W   +SEL TRA G + DR+GRP++ G I  + 
Sbjct: 64   IKLFRAPGEDVDSLLILTAKYHLAIIRW-TPTSELRTRASGHIVDRVGRPSETGMIATVH 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
                ++   LYDGL KV+ + N+G+    FN+R ++L ++DI F+    +PT+  +YQD+
Sbjct: 123  SSGLMV-FRLYDGLLKVVQW-NEGKDLRGFNVRCDDLYIIDITFMSDPDRPTLAYIYQDD 180

Query: 185  KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS--- 241
             + RH+K   + ++DK+     W  +NL+  A ++I VP P  G LI G + I Y     
Sbjct: 181  -NGRHIKVVTLNIEDKELSSPLWKHDNLEGEASMVIGVPEPAGGCLIAGPDAISYHKGGD 239

Query: 242  -ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK--------- 288
             A  +  +P   +  +    Y  VD DG RYLL D AG L++L++   K +         
Sbjct: 240  DALRYAGVPGSRLHNTHPNCYAPVDRDGQRYLLADLAGNLYMLLLEFGKGQEQDESSTVS 299

Query: 289  VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGS-YVEVLERYVN 347
            V  +K+E LG T IA  + YLDN V +IGS +GDSQLI+L+ +P A G+ Y+ +L+ Y N
Sbjct: 300  VKDMKVESLGNTCIAECMCYLDNGVCFIGSRFGDSQLIRLSTEPRADGTGYISLLDSYTN 359

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
            L PI D  V  +   GQ Q++TCSGAYKDG++RI+RNGIGI E ASVEL+GIK M++LR+
Sbjct: 360  LAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKNMFTLRT 417

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTS 466
              D  FD +L++SF S+T +L +N E ELE+T+I GF     TL+      +  ++QVT 
Sbjct: 418  R-DHEFDDYLILSFDSDTHVLLINGE-ELEDTQITGFVVDGATLWAGCLFQSTTILQVTH 475

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA 526
            G V L+   + ++   WK+    ++        Q+++A G   L+YLE        +   
Sbjct: 476  GEVILIDGDNIQI---WKASKWITLVAVNEITGQLVIACGA-LLIYLEADSAGFKLISEL 531

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL 586
            + E+EISC+DI PIG     S+I AVG WTD+SV + +LP L  + +E + G+++ RS++
Sbjct: 532  ECEFEISCIDITPIGNETLRSEICAVGYWTDLSVALRTLPQLMEVVREKIPGDMLSRSIM 591

Query: 587  LCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT--HVF 644
            L   EG  YLL ALGDG +  F ++MKTG L D KK +LGTQPI LR F S+ ++  ++F
Sbjct: 592  LSPMEGHVYLLVALGDGTVHYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRCSSVHNIF 651

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
              SDRP VIYSSN+KLL+SNVNL+ VS M P  + A+PD+L +     L IG IDDIQKL
Sbjct: 652  VCSDRPAVIYSSNQKLLFSNVNLRMVSTMTPLYAEAYPDALVLTDGNSLVIGRIDDIQKL 711

Query: 705  HIRSIPLGEHPRRICHQEQSRTFAI------------------CSLKN------------ 734
            HIR++PLGE P RI +Q ++ T A+                  C+ KN            
Sbjct: 712  HIRTVPLGESPSRIAYQPETNTIAVTVERLEFVDAMGKHHFGQCASKNAMETSSSRLSSM 771

Query: 735  ------QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGT 788
                  +  AEE E+  + LLD  TFE + ++ L+  E   S+ SC   +DS  Y+ VGT
Sbjct: 772  RREPTPECLAEEMEVSSILLLDSNTFEILHSHELEGSEMAMSLASCQLGNDSQPYFVVGT 831

Query: 789  AYVLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 846
            A ++ +E E   GRI++F   +G  +++L+ EKE KGA YS+ + +GKL+ A+N  ++L+
Sbjct: 832  AVIMSDETESKMGRIMMFQASEGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLF 891

Query: 847  KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
            +W       +EL+ EC    ++ ALY++T+ D I+VGDLM+S+SLL YK  E   E+ AR
Sbjct: 892  EWT----ADKELRLECSDFDNVTALYLKTKNDLILVGDLMRSLSLLSYKSVESTFEKVAR 947

Query: 907  DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
            D+  NWMSA EI+D D +LGAEN++NLFTV K+S     EE  RL+ +G ++LGE VN F
Sbjct: 948  DFMTNWMSACEIIDSDSFLGAENSYNLFTVVKDSFTVFKEEGTRLQELGLFYLGEMVNVF 1007

Query: 967  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 1026
             HGSL     D       ++++GT +G IGVI  +P   Y FL  +Q  L    +    +
Sbjct: 1008 CHGSLTATQVDVAPLYHSSILYGTSDGGIGVIVQMPPVLYTFLHDVQKRLADYTENCMRI 1067

Query: 1027 NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI----------------SKTM 1070
            +H Q+R+F  EK++     F+DGDLIES LD+ +  + +I                ++ +
Sbjct: 1068 SHTQYRTFETEKRSEVPNGFIDGDLIESLLDMGKDSVGQIVNGLKMPLLNIPSSETTELV 1127

Query: 1071 NVSVEELCKRVEELTRLH 1088
            + + E++ K VE+L+R+H
Sbjct: 1128 DATAEDVLKLVEDLSRIH 1145


>gi|313238818|emb|CBY20011.1| unnamed protein product [Oikopleura dioica]
 gi|313245836|emb|CBY34826.1| unnamed protein product [Oikopleura dioica]
          Length = 1135

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/1140 (37%), Positives = 661/1140 (57%), Gaps = 71/1140 (6%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVVTAHK + VTHS VG FTS  +LNLI+AK +RIE++L T  GL+P+ +  +YGRIA +
Sbjct: 10   YVVTAHKQSAVTHSVVGQFTSAADLNLIVAKYSRIEVNLSTQTGLKPVTEFNLYGRIAVI 69

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
            E+FR   E +D LFI TE    C+L++     ++ITRA GD+ D+    + +G    +DP
Sbjct: 70   EVFRYKNEKKDCLFILTESCYACILEY--VDGKIITRAYGDMRDKNYSVSQSGMHACVDP 127

Query: 126  DCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNK 185
            + R I L LYDG+ K+I  ++  +   +   R+EE+ V+D+ FL+   KPT+ +LY DN 
Sbjct: 128  EARCIALRLYDGVLKIINLNSSSKHLTSAEQRIEEILVVDMCFLHTANKPTLALLYDDNS 187

Query: 186  DARHVKTYEVALKDK----DFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
             +RH+ T  + L +        +GP+    ++    L++ VP PL G+L++G   I Y  
Sbjct: 188  -SRHLSTIAITLDNSGSGASIHKGPFRHTQVEQDTILIVAVPEPLAGILLLGHVNITYHD 246

Query: 242  ANAFKAIPIRPSITKAYGRVDA-DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL---- 296
            +       I   + +    V   D  RYL GD  G L LL++ + + ++   ++ L    
Sbjct: 247  SKNRSTCSIENIVKRTIECVTPIDKHRYLCGDSNGELFLLLLDYNENRIPEERMRLATKY 306

Query: 297  LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCV 356
            LG T++ +T+SY+DN VV++GS++GDS+LI++ +  +  G +   L +Y NLGPI D C+
Sbjct: 307  LGRTTLPNTLSYIDNYVVFVGSTFGDSELIRIEVSDNNSGQHFTSLHQYDNLGPIKDMCI 366

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTF 416
            VD E+QGQGQ+VT SG    GSLRI+RNG+GI+E AS++L+G+KG+W+L+  +       
Sbjct: 367  VDFEKQGQGQLVTASGVGTGGSLRIIRNGVGIHEYASIDLEGVKGLWALKYLSSSTKQDS 426

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            L++SF+ +T  L +  +D  E  EI GF +  QT++  +    Q +Q+T   VRL++  S
Sbjct: 427  LLLSFVGQTIFLRLEGQDVTEVEEIPGFTNGEQTMYAGNVTDQQFLQITEKQVRLIADES 486

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLD 536
              L+  W+      +N+ + N +QVLL  G    +YLEI D  + E      + EI+C+D
Sbjct: 487  --LKGSWEPEENTQINLCSVNKNQVLLGVGST-AIYLEINDCEIVEKSRHVFDSEIACVD 543

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAF--EGIS 594
            I+P+ +  S S    +G+W +++V +  LP + +I K  LGG IIPRSVLL +F      
Sbjct: 544  ISPLQKEMS-SDFFTIGLW-NVTVSVNKLPSMEVIAKMELGGNIIPRSVLLNSFGENNTP 601

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YLL ++GDG L    LN +    + +K++ LGTQP +L  F + N + VFA SDRP VI+
Sbjct: 602  YLLVSIGDGALFYIKLN-EDHSFSSKKRIQLGTQPTSLNKFQTSNGSTVFACSDRPAVIH 660

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            S+N+K+ +SNVNLK+V+HMC  ++  +P++LA+  E  L IG IDDIQKLH  +I L E 
Sbjct: 661  STNEKIFFSNVNLKQVNHMCVLDTEGYPNALALVNENALLIGKIDDIQKLHTSTIRLNET 720

Query: 715  PRRICHQEQSRTFAI-----------------------------CSLK--------NQSC 737
            P  + H E+   FA                              C  K        + S 
Sbjct: 721  PHSVLHYEEREVFAYLGEFDEEDLRDTRPDQESTKKLFTPLSIQCPYKSGVVERDDSNSL 780

Query: 738  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE 797
               + ++ + + D+ TF     +  D  E    +           +  VGTA +  +E E
Sbjct: 781  THYTMVNTLVICDEITFTPKWAHFFDVGEISSCMCIAKLGKKDEQFIVVGTA-ITADEQE 839

Query: 798  PTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNG-KLLAAINQKIQLYKWMLRDDGT 855
               GRI VF   ++ KL L++ K+  GAVYS+ A NG K++ AINQ++++++     +  
Sbjct: 840  CKNGRICVFSYSKEEKLTLVSTKQVNGAVYSVKALNGNKIICAINQQLKVFEM----NEQ 895

Query: 856  RELQSECGHHGHILALYVQ-TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
              LQSE     HI  + V  ++  FI+  DLM+SIS+  YK  EGA+EE ARDY+ NWM+
Sbjct: 896  TTLQSEAPIANHITCVAVDVSKNGFILSADLMRSISVFSYKPLEGALEEIARDYHPNWMT 955

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            A++++DDD Y+GAEN+ N+F   +N+E   +E+R +L   G YH+GE +N    G+LVM 
Sbjct: 956  AIKMIDDDNYIGAENSENIFICTRNTEAPDEEDRQQLLPTGYYHVGEHINTIVEGNLVMD 1015

Query: 975  LP-DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
            +  +S +    T + G+V+G +G++A  P +Q+ FL KL+  +RKVI+GVG ++HE WR 
Sbjct: 1016 VHVESSITPTRTFLMGSVSGYVGLLAIFPEKQWQFLSKLEAKMRKVIRGVGKIDHESWRR 1075

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE-----ELCKRVEELTRLH 1088
            F ++ +  D K F+DGDLIE F DL   +  E+   + +  E     ++ + V++L RLH
Sbjct: 1076 FESDSRMEDCKGFVDGDLIEMFQDLRPEKQKEVISELTMDGEPATHDDVVRLVDDLCRLH 1135


>gi|194381178|dbj|BAG64157.1| unnamed protein product [Homo sapiens]
          Length = 826

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/747 (51%), Positives = 499/747 (66%), Gaps = 56/747 (7%)

Query: 392  ASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTL 451
            AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ GF    QT 
Sbjct: 86   ASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTF 144

Query: 452  FCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLV 511
            FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++A G   L 
Sbjct: 145  FCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LY 203

Query: 512  YLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 571
            YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI  LP   L+
Sbjct: 204  YLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 263

Query: 572  TKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
             KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  
Sbjct: 264  HKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTV 323

Query: 632  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
            LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A   
Sbjct: 324  LRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNS 383

Query: 692  ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------------------ 733
             LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +                  
Sbjct: 384  TLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSAS 443

Query: 734  ---------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSIL 772
                                   S  EE E+H + ++D  TFE +  +     EY  S++
Sbjct: 444  TQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLV 503

Query: 773  SCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 832
            SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FN
Sbjct: 504  SCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN 563

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
            GKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL
Sbjct: 564  GKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLL 619

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 952
             YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+
Sbjct: 620  AYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQ 679

Query: 953  VVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEK 1011
             VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL    Y  L  
Sbjct: 680  EVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLD 739

Query: 1012 LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
            +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   + 
Sbjct: 740  MQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQ 799

Query: 1072 ----------VSVEELCKRVEELTRLH 1088
                       + ++L K VEELTR+H
Sbjct: 800  YDDGSGMKREATADDLIKVVEELTRIH 826



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 65/82 (79%)

Query: 4  WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
          +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3  YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64 TLELFRPHGEAQDFLFIATERY 85
           +ELFRP GE++D LFI T +Y
Sbjct: 63 VMELFRPKGESKDLLFILTAKY 84


>gi|226510488|ref|NP_001145925.1| uncharacterized protein LOC100279448 [Zea mays]
 gi|219884971|gb|ACL52860.1| unknown [Zea mays]
          Length = 416

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/416 (82%), Positives = 379/416 (91%)

Query: 673  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL 732
            MCPFN+AAFPDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRICHQEQSRT A CS 
Sbjct: 1    MCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSF 60

Query: 733  KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
            K     EESE H +RLLD QTFE +  YPLD +E GCSI+SCSF+DDSNVYYCVGTAYV+
Sbjct: 61   KYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFADDSNVYYCVGTAYVI 120

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PEENEPTKGRILVF VEDG LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWM R+
Sbjct: 121  PEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSRE 180

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
            DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE AIEERARDYNANW
Sbjct: 181  DGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEERARDYNANW 240

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
            M+AVE+LDD++Y+GAEN++NLFTVRKNS+ ATD+ER RLEVVGEYHLGEFVNRFRHGSLV
Sbjct: 241  MTAVEMLDDEVYVGAENSYNLFTVRKNSDAATDDERARLEVVGEYHLGEFVNRFRHGSLV 300

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
            MRLPDSD+GQIPTVIFGT+NGVIG+IASLPH+QY+FLEKLQ+ L K IKGVG L+HEQWR
Sbjct: 301  MRLPDSDIGQIPTVIFGTINGVIGIIASLPHDQYIFLEKLQSTLVKYIKGVGNLSHEQWR 360

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            SF+N+KKT +A+NFLDGDLIESFLDLSR++M+E+SK M V VEEL KRVEELTRLH
Sbjct: 361  SFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSKRVEELTRLH 416


>gi|328700785|ref|XP_001945395.2| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
          Length = 1072

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/1041 (38%), Positives = 623/1041 (59%), Gaps = 86/1041 (8%)

Query: 22   GNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIA 81
            G F SP + NLI+AK   IEI+L+   GL  + +  + G+I  L++FRP  +  D +F+ 
Sbjct: 53   GFFISPVQRNLIVAKLNCIEIYLINEHGLLLLSETELNGKIEILKVFRPKSKTTDLIFVV 112

Query: 82   TERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLF 139
            T +Y   +L++   S   E++T+   +V D  G  T+   +GIIDP+ +L+ L L++ +F
Sbjct: 113  TAQYNAMILEYTQGSDKIEMMTKGHCNVFDHFGVATE--FMGIIDPNAKLVMLKLFEKMF 170

Query: 140  KVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKD 199
            K+IP D +G+L + ++I +EE  + DI FLYG   PTI+++Y+ N   R +K  ++    
Sbjct: 171  KIIPLDKEGEL-DVYSITMEETNIQDIGFLYGFTNPTIIIIYE-NAMGRTIKIKKIIDSK 228

Query: 200  KDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY--CSANAFKAIPIRPSI-TK 256
                       +++  A ++IPVP PLCG +IIGE +I Y   S N  + +PIR  I   
Sbjct: 229  --------KYKSIEKEASMVIPVPSPLCGAIIIGENSIFYHNGSCNIIR-LPIRQKIEIV 279

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDN 311
             Y RVD +G+RYLLGDH+G L +L + +EK      KVT L +   GE SI  +++YLDN
Sbjct: 280  CYTRVDLEGTRYLLGDHSGCLLMLFLKYEKTLNGKFKVTDLYLRYFGEISIPISLTYLDN 339

Query: 312  AVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCS 371
             V+Y+ S +GDSQLIKL+ + +  GS++ +L++Y+NLGPIVD C+VD++++GQ Q+VTCS
Sbjct: 340  KVIYVASKFGDSQLIKLHYELNETGSHLTILDQYLNLGPIVDMCLVDIDQRGQEQIVTCS 399

Query: 372  GAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            GAYKDGSLRI+ NG+GI E A+++L GIKG+WSL  +T    D  LV+SF+  +++LA +
Sbjct: 400  GAYKDGSLRIINNGVGIQEIATIDLLGIKGIWSLSFNTKSDLDDTLVLSFVWHSKVLAYD 459

Query: 432  LEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
             E E EE  +EGF S+ QT +C   + N++VQVTS SVRL+   S++L +EWK P   ++
Sbjct: 460  SE-EAEEIYVEGFESELQTFYCGKTLDNKMVQVTSASVRLICMESKKLISEWKVPYFRNI 518

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQI-A 550
            N  + N  Q + ++G   L Y+EIG   + + KH  LE+E+SCLDI    +    + I  
Sbjct: 519  NAVSCNGHQAVCSSGHD-LYYIEIGSQKIFQNKHITLEHEVSCLDICLFKDKFGETIILL 577

Query: 551  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLL 610
            A+G+WTD S+++  LPD   + KE+L   I+PRSV     E I YL CALG+G L  F L
Sbjct: 578  AIGLWTDTSIKVLKLPDFVELEKENLFEGIVPRSVSFVTLENIHYLFCALGNGSLCYFYL 637

Query: 611  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV 670
            N++TG+L    K+ LG +P  ++ F + ++  +F  SD P +I+SSNKKL+++NVN  +V
Sbjct: 638  NIETGKLYKNGKIKLGNRPALIKKFQTASS--IFICSDFPIIIHSSNKKLVFTNVNSIKV 695

Query: 671  SHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAIC 730
            +++C  N+  +P+SL +A +  + IG ID  +K H+R+IPLGE PRRI +QE S+TF I 
Sbjct: 696  NNICMVNTDNYPNSLILATDTAIIIGVIDMEKKHHVRTIPLGESPRRIAYQEASKTFGII 755

Query: 731  SLKNQSCAE-----------------------------------------------ESEM 743
            ++K     E                                               E E+
Sbjct: 756  TIKKNIKDEMIKGPVHPSASTRTQNITSAMGNRFLIDQHLSSSSEASSLSDSDFNPEVEI 815

Query: 744  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 803
              + +L   TFE +  Y L + EY  SI+S   ++D N YY +GTA +  E  +P +GRI
Sbjct: 816  SSMIILHQDTFEILHVYQLYSNEYALSIISTKLANDPNTYYVLGTALMTEECQDPKEGRI 875

Query: 804  LVFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            +VF  +    KL  I+EK   G  +S+  F+  L+A +N  +QLY W       ++    
Sbjct: 876  VVFHYDTSLSKLTQISEKIVYGGCFSMVTFHDMLIATVNSSVQLYIWT----HEKKFVLR 931

Query: 862  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 921
            C  + + L+ +V+T G +I+ GDLMKS++L  YK +E  +E+   D    W SA+EI+DD
Sbjct: 932  CTQNNNSLSQHVKTNGKYILCGDLMKSLALFKYKTDEPNLEKIVTDDCLKWSSAIEIIDD 991

Query: 922  DIYLGAENNFNLFTVRKNSEGAT-DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD- 979
            D+++GAEN+  L+   K+S   + D +    + +G +HLG+ VN FRHGSLVM+  +++ 
Sbjct: 992  DLFIGAENDKYLYVFYKHSNFVSGDYQHNNFKEIGRFHLGDLVNVFRHGSLVMKQFENEY 1051

Query: 980  ---VGQIPTVIFGTVNGVIGV 997
               +    ++++GT++G +G+
Sbjct: 1052 ETQLSVQGSILYGTISGALGL 1072


>gi|395544366|ref|XP_003774082.1| PREDICTED: DNA damage-binding protein 1 [Sarcophilus harrisii]
          Length = 1239

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/713 (51%), Positives = 476/713 (66%), Gaps = 56/713 (7%)

Query: 426  RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 485
            R+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK 
Sbjct: 533  RVLMLNGE-EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKE 591

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPS 545
            P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++CLDI P+G++  
Sbjct: 592  PQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 650

Query: 546  YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHL 605
             S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L
Sbjct: 651  MSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGAL 710

Query: 606  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 665
              F L+++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNV
Sbjct: 711  FYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV 770

Query: 666  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 725
            NLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+
Sbjct: 771  NLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQ 830

Query: 726  TFAICSLK---------------------------------------NQSCAEESEMHFV 746
             F + S +                                         S  EE E+H +
Sbjct: 831  CFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNL 890

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF 806
             ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF
Sbjct: 891  LIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVF 950

Query: 807  IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 866
               DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ 
Sbjct: 951  QYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYN 1006

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
            +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LG
Sbjct: 1007 NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLG 1066

Query: 927  AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPT 985
            AEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +
Sbjct: 1067 AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGS 1126

Query: 986  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  
Sbjct: 1127 VLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATG 1186

Query: 1046 FLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 1088
            F+DGDLIESFLD+SR +M E+   +            + ++L K VEELTR+H
Sbjct: 1187 FIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1239



 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/348 (56%), Positives = 261/348 (75%), Gaps = 11/348 (3%)

Query: 69  RPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPD 126
           R  GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IGIIDP+
Sbjct: 73  RQQGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPE 132

Query: 127 CRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKD 186
           CR+IGL LYDGLFKVIP D   +  +AFNIRLEELQV+D+KFLYGC  PTI  +YQD + 
Sbjct: 133 CRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQ- 191

Query: 187 ARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFK 246
            RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y + + + 
Sbjct: 192 GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYL 251

Query: 247 AIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLG 298
           AI    I+ S    + RVD +GSRYLLGD  G L +L++  E++      +  L++ELLG
Sbjct: 252 AIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLG 311

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
           ETSIA  ++YLDN VV++GS  GDSQL+KLN+  + +GSYV  +E + NLGPIVD CVVD
Sbjct: 312 ETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVD 371

Query: 359 LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 406
           LERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+E AS++L GIKG+W LR
Sbjct: 372 LERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLR 419



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 44/50 (88%)

Query: 21  VGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRP 70
           +G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA +ELFRP
Sbjct: 469 IGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRP 518


>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
            magnipapillata]
          Length = 725

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/801 (46%), Positives = 514/801 (64%), Gaps = 88/801 (10%)

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            TSI   ++YLDN VV+IGS  GDSQ++KLN +PD KGS++ +L  + NLGPI+D CVVDL
Sbjct: 1    TSIPHCLTYLDNGVVFIGSCLGDSQIVKLNTEPDKKGSFITILRSFTNLGPILDMCVVDL 60

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR--SSTDDPFDTFL 417
            ERQGQ Q+VTCSGA+KDGSLRI+RNGIGINE AS++L GI G+W L+  S   D  DT +
Sbjct: 61   ERQGQDQLVTCSGAFKDGSLRIIRNGIGINELASIDLAGIMGLWCLKVNSINSDLHDT-M 119

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            V+SF+ ++R+L+++  +E+EE EIEGF S  QT +C +  +NQL+Q              
Sbjct: 120  VLSFVGQSRVLSLS-TEEVEEIEIEGFSSDKQTTYCANVNFNQLIQ------------KH 166

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI 537
               + W  P    ++VA +N+ Q++++ G   L+YLE+ D  + ++ H  LEYE++CLD+
Sbjct: 167  FFFSNWLPPDNKHISVAVSNSFQIVVSLGK-ELIYLEVEDSNIKQISHTVLEYEVACLDL 225

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLL 597
            +P G N + S    VG+WTDISVRI +LP+L  +  E L GE+IPRS+L+  FE   YLL
Sbjct: 226  SPKGSNETTSDRLCVGLWTDISVRILALPNLEELYVEKLSGEMIPRSILMITFEDKEYLL 285

Query: 598  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSN 657
            CALGDG L  FLLN  TG L+D+KKVSLGT+P  +++F S ++THVFA SDRPTVIYSSN
Sbjct: 286  CALGDGSLFYFLLNRLTGVLSDQKKVSLGTKPTVIQSFKSGSSTHVFACSDRPTVIYSSN 345

Query: 658  KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRR 717
             KL++SNVNLKEV +M P N+ A+P+S           G ID I K+      L  H  +
Sbjct: 346  NKLVFSNVNLKEVCYMSPLNTQAYPNSFY--------SGHIDSIYKMFF----LVTHSHQ 393

Query: 718  ICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
                E + +   CS                                            FS
Sbjct: 394  FLENEWATSLTSCS--------------------------------------------FS 409

Query: 778  DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 837
            +D N YYCVGT+ V PEE+EP +G+I++F + +GKL  I  K   GAVY L  FNGKLLA
Sbjct: 410  NDPNTYYCVGTSMVYPEESEPKEGKIILFQLFEGKLVQIGSKTVNGAVYVLQGFNGKLLA 469

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
             +N  + +Y+W       +EL+ EC +H  ILALY++++GDFI+VGDLM+S++LL YK  
Sbjct: 470  GVNSLVSVYEWT----SDKELKQECCYHNTILALYLKSKGDFILVGDLMRSMTLLAYK-P 524

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 957
             G +EE A D++ NWM+AVEI+DDD +LGAEN+FNLF  +K++    DEER  L+ +G+Y
Sbjct: 525  LGRLEEIAHDFSPNWMTAVEIIDDDTFLGAENSFNLFICQKDNSSVNDEERHHLQTIGKY 584

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
            HLG+FVN F+HGSLVM      +  I  ++++GTV G IG++A LP   + FL ++Q  L
Sbjct: 585  HLGDFVNVFKHGSLVMHHSTEQLTPISSSILYGTVRGAIGLVAGLPKNTFDFLSQVQEKL 644

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---- 1072
             K IK VG + HE WRSF N+KKT  A   +DGDLIES LDL+RT++ E+   + +    
Sbjct: 645  SKTIKSVGKIEHEFWRSFYNDKKTDLAVGCVDGDLIESCLDLTRTQLHEVVSGLEIEEAG 704

Query: 1073 -----SVEELCKRVEELTRLH 1088
                 +V++L K VEEL+R+H
Sbjct: 705  IKRECTVDDLIKVVEELSRIH 725


>gi|255316764|gb|ACU01763.1| putative DNA damage binding protein [Brachypodium distachyon]
          Length = 384

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/384 (81%), Positives = 352/384 (91%), Gaps = 1/384 (0%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 764
            IR+IPL E  RRICHQEQSRT A CS K N +  EESE HF+RLLD QTFEF+ST+PLD 
Sbjct: 1    IRTIPLNEQARRICHQEQSRTLAFCSFKYNPNSMEESEAHFIRLLDHQTFEFLSTHPLDQ 60

Query: 765  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 824
            +E GCS++SCSFSDD+N YYCVGTAYVLPEENEPTKGRILVF VEDG+LQLI EKETKGA
Sbjct: 61   YECGCSMISCSFSDDNNFYYCVGTAYVLPEENEPTKGRILVFAVEDGRLQLIVEKETKGA 120

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 884
            VYSLNAFNGKLLAAINQKIQLYKWM R+DG+ ELQSECGHHGHILAL+ QTRGDFIVVGD
Sbjct: 121  VYSLNAFNGKLLAAINQKIQLYKWMTREDGSHELQSECGHHGHILALFTQTRGDFIVVGD 180

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
            LMKSISLL+YKHEE AIEE ARDYNANWM+AVE++DDDIY+GAEN++NLFTVRKNS+ AT
Sbjct: 181  LMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKNSDAAT 240

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
            DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD+++GQIPTVIFGT+NGVIG+IASLPH+
Sbjct: 241  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDTEMGQIPTVIFGTINGVIGIIASLPHD 300

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
            QY+FLEKLQ+ L K IKGVG L+H+QWRSF+NEKKT +A+NFLDGDLIESFLDL+R++M+
Sbjct: 301  QYVFLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAEARNFLDGDLIESFLDLNRSKME 360

Query: 1065 EISKTMNVSVEELCKRVEELTRLH 1088
            E+SK M VSVE L KRVEELTRLH
Sbjct: 361  EVSKGMGVSVENLSKRVEELTRLH 384


>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
          Length = 1057

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/1132 (36%), Positives = 624/1132 (55%), Gaps = 120/1132 (10%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            MS   YVVTA KPT    S  G+FTS +E+NLI+ K TRIE++ LTP GL+P ++     
Sbjct: 1    MSYHKYVVTAQKPTATQFSVKGSFTSSEEINLILGKGTRIEVYTLTPDGLKPTIE----- 55

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
                   F+  GE   F F    R          E++ +IT                   
Sbjct: 56   -------FKGSGE---FTFPGQPR---------NETTNVITA------------------ 78

Query: 121  GIIDPDCRLIGLHLYDGLFKV----------IPFDNKGQLK---------------EAFN 155
              +DP  R +   LY+    +          +P   K  L+               +  N
Sbjct: 79   --LDPSWRYLAATLYESTVTLLIPEASQHPTVPIQRKVSLRHKEGKRRPQEYNHPQDHIN 136

Query: 156  IRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNG 215
            I L + +V+ + FL     PT+++LY+D  + R ++ + +  KD+  V G    ++ ++ 
Sbjct: 137  ISLPDKKVISLAFLQDTLDPTLLILYEDALEQRLLQMFTI--KDRQLVPGDIILDHFESD 194

Query: 216  ADLLIPVPPPLCGVLIIGEETIVYCSANAFK-AIPIRPSITKAYGRVDADGSRYLLGDHA 274
            A LLI +PP + GVL++  + I Y   N    AI IR S   ++  ++ +GSR LLGD  
Sbjct: 195  ASLLIAMPPAVGGVLLVASKFIRYLKPNQPPIAIGIRSSTINSHCIMNEEGSRVLLGDAE 254

Query: 275  GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA 334
            GLL+LL +    + V  L    LG  SI S ++YLDN +V++GS+  DSQL+ +      
Sbjct: 255  GLLYLLALNTTNQCVESLSFIYLGSISIPSCLAYLDNDIVFVGSNLADSQLVYIQRTTGE 314

Query: 335  KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
                ++++E + NLGPI DFCV D  + GQ QV+TCSGA K+GSLRI+RNG+G+NE A +
Sbjct: 315  SEDILQIIETFANLGPITDFCVAD--KGGQTQVITCSGAGKEGSLRIIRNGVGLNELAMI 372

Query: 395  ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS---QTQTL 451
             + G+KG+W+L       +D  L++SF+ +TR+L +  +  +   +++ F +     +TL
Sbjct: 373  PISGVKGIWAL-----GEYD-LLLMSFVHQTRLLQLQKDHTI--VQLDTFSAIDLNARTL 424

Query: 452  FCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLV 511
                 +   ++QVT  SVRL+ + S  L + W S     + VA+ N +Q +++ G G LV
Sbjct: 425  VAGCVVDGMIIQVTDHSVRLMDTMS--LLDVWSSDE--LITVASVNPTQCVISLGFGKLV 480

Query: 512  YLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW-TDISVRIFSLPDLNL 570
             L++ +  L  +   +L +EISC+DI+PIG   + S   A+G W ++ +V + SL DL  
Sbjct: 481  ALQVLNRKLNVIGETRLSFEISCIDIHPIGSR-TESAFVALGTWNSNTNVCLLSLSDLQP 539

Query: 571  ITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
            I ++ LGG ++PRS+L+  FE   YLL ALGDG   NF L+  +G+L+D+K+  LG  PI
Sbjct: 540  IAQKSLGGTVVPRSILISQFENTVYLLVALGDGQFYNFKLDSISGQLSDKKRTFLGKLPI 599

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA-IAK 689
             L  FS    THVFAASD+P+V++S N+KL+YSNVNLKEV     F   AFPD++A I K
Sbjct: 600  HLSNFSLNGVTHVFAASDKPSVVHSRNQKLVYSNVNLKEVRCATSFGCHAFPDAVALITK 659

Query: 690  EGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS--LKNQSCAEESEMHFVR 747
            EG L IG +++IQKLHI  IP  + PRRI +QE +++F I +  + +      +      
Sbjct: 660  EG-LIIGQMEEIQKLHITKIPTIDTPRRIVYQESTKSFGIITERMISDRYRPSTVTGGFE 718

Query: 748  LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF- 806
            +LDDQ+F  +       FE   S+ S  F DD N YY V +     +EN+   GRILV  
Sbjct: 719  VLDDQSFTVLDRIYFKEFERPLSVTSVLFEDDPNEYYIVASG----KENDGL-GRILVLQ 773

Query: 807  IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM---LRDDGTRELQSECG 863
            +  D KL+LI++ +T G +  +    GKLLA+I   + LY+W    L    +R L S   
Sbjct: 774  LASDRKLRLISQLKTGGMIDCVRPIEGKLLASIQGTLYLYRWQSQRLVKVSSRRLPS--- 830

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                 +   + T  +FI+ GDL  S+ +  Y  +   + E A       + A++ +D ++
Sbjct: 831  -----VTRCMTTHENFIMTGDLAYSVVMFQYDRQSDQLLEVAAHEKTKEVLAMKAIDSNL 885

Query: 924  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
             +GAE   +LF +    +  + +E   L+V+  +HLG+ V+RFR GSL M   D D   I
Sbjct: 886  VIGAEREGHLFVLEHCQDEVSADE-PLLDVISTWHLGDVVSRFRFGSLGMNNVDPDSSPI 944

Query: 984  -PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             P++IF T +G IGVIA L  E+Y  L ++Q N+ +V+KG+G L+H  WR+ N   +  +
Sbjct: 945  APSLIFATASGAIGVIADLSPERYKLLYQMQCNMCRVVKGIGELSHTDWRNVNIMYRKEE 1004

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 1088
            A NF+DGDLIESFLDLS  +M  +       + ++++VE+LCK VEEL  +H
Sbjct: 1005 AMNFIDGDLIESFLDLSSQQMQNVVDGLHGGRKLDLTVEDLCKVVEELMSIH 1056


>gi|219125301|ref|XP_002182922.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum CCAP
            1055/1]
 gi|217405716|gb|EEC45658.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum CCAP
            1055/1]
          Length = 1284

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/1229 (35%), Positives = 653/1229 (53%), Gaps = 169/1229 (13%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL--TPQGLQP---MLDVPIY 59
            +YVVTAH P  V  +   NFTSP  L++++AK  R+E+  L  T +GL P   +  VPI 
Sbjct: 11   HYVVTAHPPGGVLLTAKCNFTSPFSLDVLVAKSRRLEVRQLRTTTEGLSPFPILASVPIN 70

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS-----ELITRAMGDVSDR---- 110
            GRI  L  F+ HG    ++F+ T R ++ VL +D  +S      L+T A G +  +    
Sbjct: 71   GRIVGLVPFKVHGSDTSYVFVLTARQQYAVLAYDRTNSGSAAYPLVTLASGTLQSQEHAV 130

Query: 111  IGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIP----FDNKGQLKEAFNIRLEELQVLDI 166
            +G+  ++G I  ID   R I LH+YDGL  +IP      ++  L   F+ R+EE  +L +
Sbjct: 131  LGQEAESGPIVAIDHFHRCIALHVYDGLLTIIPSTRTLASQQLLGTPFHCRIEERTILHL 190

Query: 167  KFLYGC--AKPTIVVLYQDNKDARHVKTYEVALKDKD-FVEGP--------WSQ-NNLDN 214
             FL     A P + VL+QD + A+H+ ++ +  K K+ F+ G         W Q +N+D 
Sbjct: 191  AFLQIPFEALPQLAVLHQDARGAQHITSHVINWKRKNIFLYGSSSAPAATEWLQKSNVDG 250

Query: 215  GADLLIPVP---PP--------LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDA 263
            G+ L+IPVP   PP          GVL++G+  + + + N  K +PI  ++      + A
Sbjct: 251  GSSLIIPVPAEAPPDFAPAKHRSGGVLVVGQRQLTFINNNVTKVVPIPQALHLCVEELPA 310

Query: 264  DGS----RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
            D +    RYLL D  G LH++ I    +KV  L+I+ LG  ++A++I+YL   +V++GS+
Sbjct: 311  DPNGGLPRYLLADEFGNLHMVTIVLVVDKVVALQIDTLGSCTLATSIAYLREGLVFVGST 370

Query: 320  YGDSQLIKLNLQP-----------DAKGSYVEVLERYVNLGPIVDFCVV----------- 357
             GD QLI+++ +P            A+ SY+ V+E Y +LGPI+DF +V           
Sbjct: 371  LGDPQLIQIHDEPIVDVEDEEDMVGAESSYLSVVEEYTHLGPILDFDLVPTAPGGGGLGQ 430

Query: 358  --DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDT 415
               +    Q QVVT SG+ K GSLR++RNGIG+NE A+VE+ GI+ +WSLR S  D  DT
Sbjct: 431  TEGIHGPSQSQVVTASGSSKSGSLRLIRNGIGMNESAAVEIPGIQNVWSLRRSFADVDDT 490

Query: 416  FLVVSFISETRILAMNLEDELEETEIEG---------------FCSQTQTLFCHD--AIY 458
            +LV SF+ ETR+L +   D++ + E EG                 S   TL+  +  A  
Sbjct: 491  YLVQSFVHETRVLGVTTMDDMSQDEKEGDVAPGGTLEEVFLIGLKSSCATLYVGNVQAHQ 550

Query: 459  NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN-ASQVLLATGGGHLVYLEIGD 517
            N L+Q+T G VR   +T   + + W  P G ++ V TAN A Q+ +A  GG ++YL+I +
Sbjct: 551  NGLLQITEGEVRF--ATMEAVLDTWLVPSGAAITVGTANEAGQIAVALNGGKVLYLKIEE 608

Query: 518  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG 577
            G + E    Q+E E+SCL++NP       S   AVG+W D +VR+F    L LIT +   
Sbjct: 609  GKIRECSGQQMEREVSCLNLNPFAATSHTSSFLAVGLWDDFTVRLF----LCLITLDFSS 664

Query: 578  GEIIPRSVLLCAFEG----ISYLLCALGDGHLLNFLLNMKTGEL--TDRKKVSLGTQPIT 631
            G     +    +       ++ L   LGDG L++F +  +   +    +K+V LGTQ I 
Sbjct: 665  GTSGNTTSTSTSLSSTGSGVNMLFVGLGDGTLISFAVVERGASIFVQSKKEVCLGTQRID 724

Query: 632  LRTF-SSKNTTHVFAASDRPTVIYSS----------NKKLLYSNVNLKE----------- 669
            L    + +  T V A  DRPTVIY +          N KL YSNVNL             
Sbjct: 725  LVPLCTEQGGTCVLATGDRPTVIYLAGVGGISANQFNPKLCYSNVNLSAGDDEEEDDVSR 784

Query: 670  --------VSHMCPFNSAAFPDS---------LAIAKEGELTIGTIDDIQKLHIRSIPLG 712
                    V+   PF+S+   DS         L +A +  L +G IDDIQKLH+ +  LG
Sbjct: 785  PPSQQSIVVNVATPFSSSLLFDSATGGSQRYSLCVADDSFLRMGIIDDIQKLHVTTCRLG 844

Query: 713  EHPRRICHQEQSRTFAICSLKN-----QSCAEESEM-HFVRLLDDQTFEFISTYPLDTFE 766
              P RI H    R FA+  +++         +E+ M + +R +DD  F+ I    L+ FE
Sbjct: 845  MAPCRIVHCADGRLFAVGCIESGIKQFSLGGDEANMGNCIRFMDDANFDDIHRVDLEPFE 904

Query: 767  YGCSILSCSFSDDSN----------VYYCVGTAYVLPEENEPTKGRILVFIVEDGK---- 812
               S++  +    S+           +  VGTAY +P+E+EP++GRILV+  +  +    
Sbjct: 905  MILSMVYATLRIPSDGDQSDQPVHRPFLLVGTAYAMPDEDEPSRGRILVYSCQADEASGT 964

Query: 813  ------LQLIAEKETKGAVYSLNAF-NGKLLAAINQKIQLYKWMLRDDGTRELQ-SECGH 864
                  ++ I E  T+G VYS+  F +G  L  +N K  + + ++ D G   L+    GH
Sbjct: 965  PTSTRAVRQITEMSTQGGVYSICQFYDGNFLCTVNSKTHVVQ-IVADCGVLRLEYVGIGH 1023

Query: 865  HGHILALYVQTRGD-FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
            HGHI++L+V++R     +VGDLM+S+SL+ Y  +   +EE ARD+N NW +AVE+L DD+
Sbjct: 1024 HGHIVSLFVKSRAKPLAIVGDLMRSVSLMQYYPQHETLEEVARDFNPNWTTAVEMLTDDV 1083

Query: 924  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL-PDSDVGQ 982
            Y+GAEN  NLF +R+N    ++E R RL+ +GE+HLGE  N+F  GSLVM +  +S    
Sbjct: 1084 YIGAENWNNLFCLRRNKAATSEEIRCRLDNIGEFHLGEMCNKFMSGSLVMPVSSNSTTSS 1143

Query: 983  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
                +FGTV G +GVI  L      F   L+  + K I+ VGG +H+ +RS   E +   
Sbjct: 1144 RRATLFGTVEGSLGVILGLDGRTAAFFITLERAIAKTIQPVGGFSHQLYRSCQAELRVHP 1203

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
            A  F+DGDL+E+FLDL R  M+ +   MN
Sbjct: 1204 AHGFVDGDLVETFLDLDRRTMEAVVAEMN 1232


>gi|17541566|ref|NP_502299.1| Protein DDB-1 [Caenorhabditis elegans]
 gi|74965443|sp|Q21554.2|DDB1_CAEEL RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|5824558|emb|CAA92824.2| Protein DDB-1 [Caenorhabditis elegans]
          Length = 1134

 Score =  640 bits (1651), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 391/1148 (34%), Positives = 640/1148 (55%), Gaps = 81/1148 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y V+A K + V  S VGNFT  + +NLI+A+  RI++ L++P+GL+ + ++PIYG++ T
Sbjct: 4    SYCVSAKKASVVVESVVGNFTGHENVNLIVARGNRIDVQLVSPEGLKNVCEIPIYGQVLT 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            + L +   + +  L + TE++   +L +     +++TRA G ++D  GR TDN    +  
Sbjct: 64   IALVKCKRDKRHSLIVVTEKWHMAILAY--RDGKVVTRAAGCIADPTGRATDN-LFSLTI 120

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-YGCAKPTIVVLYQD 183
                LI +  ++G  K+I +++   L+  FN+R +   V D KF+  G      V    D
Sbjct: 121  HRNGLIAIRAFEGSVKMIQWESGTDLRH-FNVRFDYPNVSDFKFVDTGEDDVYRVAFIYD 179

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-CSA 242
            +   +H++  ++ + DK+F      Q ++   + +LIPVP  + GV+++G  +++Y  + 
Sbjct: 180  DDHGKHLQFSDLNMHDKEF-RTYSRQASIAADSSVLIPVPHAIGGVIVLGSNSVLYKPND 238

Query: 243  NAFKAIPIRPSITK-----AYGRVDADGSRYLLGDHAG-LLHLLVITHEKEK---VTGLK 293
            N  + +P   S+ +      +G VDA G R+LL D  G LL LL+   E +    V  ++
Sbjct: 239  NLGEVVPYTCSLLENTTFTCHGIVDASGERFLLSDTDGRLLMLLLNVTESQSGYTVKEMR 298

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            I+ LGETSIA +I+Y+DN VV++GS  GDSQLI+L  +P+  GSY  +LE Y N+GPI D
Sbjct: 299  IDYLGETSIADSINYIDNGVVFVGSRLGDSQLIRLMTEPNG-GSYSVILETYSNIGPIRD 357

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
              +V  E  GQ Q+VTC+GA KDGSLR++RNGIGI+E ASV+L G+ G++ +R   D   
Sbjct: 358  MVMV--ESDGQPQLVTCTGADKDGSLRVIRNGIGIDELASVDLAGVVGIFPIR--LDSNA 413

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI----YNQLVQVTSGSV 469
            D +++VS   ET +L +  E ELE+ ++    +   T+F            ++Q T   +
Sbjct: 414  DNYVIVSLSDETHVLQITGE-ELEDVKLLEINTDLPTIFASTLFGPNDSGIILQATEKQI 472

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL------EIGDGILTEV 523
            RL+SS+   L   W+   G  ++  + NA+   +       VYL      E+G   +   
Sbjct: 473  RLMSSSG--LSKFWEPTNGEIISKVSVNAANGQIVLAARDTVYLLTCIVDEMGALDIQLT 530

Query: 524  KHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 582
               + E EI+CLD++  G++P+  +    +  W+  ++ +  LPDL  +    L  +IIP
Sbjct: 531  AEKKFENEIACLDLSNEGDDPNNKATFLVLAFWSTFAMEVIQLPDLITVCHTDLPTKIIP 590

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
            RS++    E + YLL A GDG L+ ++ ++KTG   + KK ++GT+P +L    +KN  H
Sbjct: 591  RSIIATCIEEVHYLLVAFGDGALVYYVFDIKTGTHGEPKKSNVGTRPPSLHRVRNKNRQH 650

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ 702
            +F  SDRP +I+S++KKL++SNVN+K V  +C  +S+A+ D L I+    +  GT+DDIQ
Sbjct: 651  LFVCSDRPVIIFSASKKLVFSNVNVKLVDTVCSLSSSAYRDCLVISDGNSMVFGTVDDIQ 710

Query: 703  KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE---SEMHFVR------------ 747
            K+H+RSIP+GE   RI +Q+ + T+ +CS + +S AE    S+   V             
Sbjct: 711  KIHVRSIPMGESVLRIAYQKSTSTYGVCSNRTESKAERVFASKNALVTSQSRPKVASTRA 770

Query: 748  --------------LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
                          +LD  TF+ + ++    +E   S +S  F++DS+ YY VGT  + P
Sbjct: 771  DMDESPPNTTSSFMVLDQNTFQVLHSHEFGPWETALSCISGQFTNDSSTYYVVGTGLIYP 830

Query: 794  EENEPTKGRILVFIVED---GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            +E E   GRI+VF V+D    KL+ + E   +G+  ++   NGKL+AAIN  I+L++W  
Sbjct: 831  DETETKIGRIVVFEVDDVERSKLRRVHELVVRGSPLAIRILNGKLVAAINSSIRLFEWTT 890

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
                 +EL+ EC    H++AL ++   + + V D+M+S+SLL Y+  EG  EE A+D+N+
Sbjct: 891  ----DKELRLECSSFNHVIALDLKVMNEEVAVADVMRSVSLLSYRMLEGNFEEVAKDWNS 946

Query: 911  NWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHG 969
             WM   E +  +  LG E + NLFTV    +   TD+ R  LE  G ++LGE        
Sbjct: 947  QWMVTCEFITAESILGGEAHLNLFTVEVDKTRPITDDGRYVLEPTGYWYLGELPKVMTRS 1006

Query: 970  SLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
            +LV++  DS +     ++FGT  G IG+I  +  +   FL  ++  +   +K    + H 
Sbjct: 1007 TLVIQPEDSIIQYSQPIMFGTNQGTIGMIVQIDDKWKKFLIAIEKAIADSVKNCMHIEHS 1066

Query: 1030 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT-RMDEISKTMNVSVE--------ELCKR 1080
             +R+F  +K+      F+DGDL+ES LD+ R+  MD +SK  +   +        E+ K 
Sbjct: 1067 SYRTFVFQKRAEPPSGFVDGDLVESILDMDRSVAMDILSKVSDKGWDPSLPRDPVEILKV 1126

Query: 1081 VEELTRLH 1088
            +E+L R+H
Sbjct: 1127 IEDLARMH 1134


>gi|268536658|ref|XP_002633464.1| C. briggsae CBR-DDB-1 protein [Caenorhabditis briggsae]
          Length = 1134

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 396/1150 (34%), Positives = 632/1150 (54%), Gaps = 85/1150 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y V+A K + VT S VGNFT    ++LI+A+  RI++ L+TP+GL+ + ++PIYG+++T
Sbjct: 4    SYCVSAKKASVVTESVVGNFTGQDNVDLIVARGNRIDVQLVTPEGLKNICEIPIYGQVST 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            + L +   E Q  L + T+++   VL +     ++ITRA G +++  GR  D   + +  
Sbjct: 64   ISLIKFRREKQHSLVVVTDKFNLAVLGY--RDGKVITRAAGSIAEYSGRSADTA-VAMTI 120

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY-QD 183
                LI +  Y+G  K++ ++    ++  FN+R +   V D KF+      T+ V +  D
Sbjct: 121  HRSGLIAIIGYEGSVKMVHWEPGADVRH-FNVRFDYPNVSDFKFVDTGDDDTVRVAFIYD 179

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
            +   +H++  ++ + DK+F      Q+ +   + +LIPVP P+ GV+++G  + +Y +++
Sbjct: 180  DDHGKHLQFSDLNMHDKEF-HTFSKQSCIAADSQVLIPVPAPVGGVIVLGANSALYKASD 238

Query: 244  A------FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVIT----HEKEKVTGLK 293
                   +    ++ +I   +G VDA G R+LL D  G L +L++          V  ++
Sbjct: 239  VNGDVVPYSCSLLKNTIFTCHGIVDASGDRFLLADTDGRLLMLLLNIGEGRSGTTVKEMR 298

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            IE LGETS+A +++Y+DN VV++GS  GDSQLI+L   P+  GSY  VLE Y N GPI D
Sbjct: 299  IEYLGETSVADSVNYVDNGVVFVGSRLGDSQLIRLMTAPNG-GSYSVVLETYTNTGPIRD 357

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW--SLRSSTDD 411
              +V  E  GQ Q+VTCSGA KDGSLR++RNGIGI E ASV+L  + GM+   LRS+TD+
Sbjct: 358  MVLV--ESDGQPQLVTCSGADKDGSLRVIRNGIGIEELASVDLAKVIGMFPIRLRSTTDN 415

Query: 412  PFDTFLVVSFISETRILAMN---LED-ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
                F++VS   ET +L +    LED +L E E E       +LF  D     ++QVT  
Sbjct: 416  ----FVIVSLPDETHVLKITGEELEDVQLLEIETERTTMYASSLFGPDD-SELILQVTEE 470

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL------EIGDGILT 521
             +R +S   +     W+   G SV+  + NA    +       VY       E G   + 
Sbjct: 471  EIRFMSFQKQV--KIWRPTNGESVSKVSVNAIHGQIVVAARDTVYYLKCMVDEAGALDIQ 528

Query: 522  EVKHAQLEYEISCLDINPIGEN-PSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
             V   + E EI+CLDI+  G++         + +W   S+ +  L DL    + +L  +I
Sbjct: 529  IVAERKFEAEIACLDISNEGDDYKKPGTFMVLALWGSFSMEVVQLSDLKTACQTNLPSKI 588

Query: 581  IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            +PRS++    E + YLL A GDG L+ ++ ++KTG   + KK S+GT+P +L    +KN 
Sbjct: 589  VPRSIVATCIEDVHYLLVAFGDGALIYYVFDIKTGTHGEAKKSSVGTRPPSLHRVRNKNR 648

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
             H+F  SDRP +I+S+NKKL++SNVN+K V+ +C  +S ++ D L I+    +  GT+DD
Sbjct: 649  QHLFVCSDRPVIIFSANKKLVFSNVNVKVVNTVCSLSSTSYRDCLVISDGNSMVFGTVDD 708

Query: 701  IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE------------ESEMHFVR- 747
            IQK+HIRSIP+GE   RI +Q+ + T+ +CS ++++  E            +S    V  
Sbjct: 709  IQKIHIRSIPMGESVMRIAYQKSTGTYGVCSSRSETKPERVYASKNALANSQSRAKIVAT 768

Query: 748  ----------------LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 791
                            +LD  TF+ +  +    FE   S +S  FSDD+  YY VGT  +
Sbjct: 769  RNEVNDGPPASTSSFMILDQNTFQVLHAHEFGPFEAAVSCISGQFSDDARQYYIVGTGLI 828

Query: 792  LPEENEPTKGRILVFIVED---GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
             P+E++   GRI+VF V+D    KL+ + E   +G+  +L   NGKL+AAIN  ++L++W
Sbjct: 829  YPDESDTKLGRIIVFEVDDVERTKLRRVHELVVRGSPLALRILNGKLVAAINSSVRLFEW 888

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
                   + L+ EC +  HI+AL ++   + + V DLM+S+SLL Y+  EG  EE A+D+
Sbjct: 889  T----ADKVLRLECSNFNHIVALDLKVMNEEVAVADLMRSVSLLSYRMMEGNFEEVAKDW 944

Query: 909  NANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
            N+ WM   E +  +  LG E + N+FTV    S   TD+ R  LE  G ++LGE      
Sbjct: 945  NSEWMVTCEFITAESILGGEAHLNMFTVEVDKSRPITDDGRYVLEPTGYWYLGELPKVMV 1004

Query: 968  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
              SLV++  DS +     ++FGT  G IG++  +  +   FL  ++  +   +K    + 
Sbjct: 1005 RASLVVQPEDSTIEYSHPIMFGTNQGTIGMLVQIDDKWKKFLVSIEKAISDSVKNCMQIE 1064

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM-----NVSVE----ELC 1078
            H  +RSF  +K+      F+DGDL+ES LD+ R+   +I K +     + S+     E+ 
Sbjct: 1065 HSTYRSFIFQKRIEPPSGFIDGDLVESILDMDRSVAIDILKKVSDKGWDASLPRDPVEML 1124

Query: 1079 KRVEELTRLH 1088
            K +E+L R+H
Sbjct: 1125 KVIEDLARMH 1134


>gi|308477185|ref|XP_003100807.1| CRE-DDB-1 protein [Caenorhabditis remanei]
 gi|308264619|gb|EFP08572.1| CRE-DDB-1 protein [Caenorhabditis remanei]
          Length = 1154

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 398/1173 (33%), Positives = 638/1173 (54%), Gaps = 111/1173 (9%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y V++ K + V+ S VGNFT  + +NLI+A+  RI++ L++P+GL+ + ++PIYG++ T
Sbjct: 4    SYCVSSKKASVVSESVVGNFTGHEHVNLIVARGNRIDVQLVSPEGLKNVCEIPIYGQVLT 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            + L R   E +  L + TE+++  VL +     ++ITR  G ++D+ GR +DN    +  
Sbjct: 64   MALVRCKREKRQSLVVVTEKWQMAVLTY--RDGKVITRTAGALADQSGRASDN-LFSLTI 120

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-YGCAKPTIVVLYQD 183
                L+ +  Y+G  K+I ++  G    +FN+R +   V D KF+  G      +    D
Sbjct: 121  HRSGLVAIRAYEGSVKMIQWE-PGTDVRSFNVRFDYPNVSDFKFIDTGVDDTYRIAFIYD 179

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
            +   +H++  ++ + DK+       Q ++   A +LIPVP P+ GVL++   +I+Y S++
Sbjct: 180  DDHGKHLQFSDLNMHDKEL-HTFSRQASIAADASVLIPVPAPISGVLVLAANSILYKSSD 238

Query: 244  A------FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK----VTGLK 293
                   + +  +  ++   +G VD  G R++L D  G L +L++   + +    V  ++
Sbjct: 239  VNGDVVPYASPLLDNTVFTCHGLVDPSGERFILSDTEGRLLMLILNIGEGRSGITVKDMR 298

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVD 353
            IE LGETSIA +I+Y+D  VV++GS  GDSQLI+L   P   GSY  VLE Y N+GPI D
Sbjct: 299  IEYLGETSIADSINYIDAGVVFVGSRLGDSQLIRLMPTPSG-GSYSVVLETYSNIGPIRD 357

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR--SSTDD 411
              +V  E  GQ Q+VTCSGA KDGSLR++RNGIGI E ASVEL G+ G++ +R  S+TD+
Sbjct: 358  MIMV--ESDGQAQLVTCSGAEKDGSLRVIRNGIGIEELASVELAGVIGIFPIRLNSTTDN 415

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-----LVQVTS 466
                +++VS   ET +L +N E ELE+ ++   C++  T+F    I+       L+QVT 
Sbjct: 416  ----YVIVSLAEETHVLQINGE-ELEDVQLLQICTEMPTIFA-STIFGPDNSEVLLQVTE 469

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL------EIGDGIL 520
              VR ++ +   L   W+ P G  ++  + NA    +       VY       E+G   +
Sbjct: 470  KHVRFMAFSG--LSKIWEPPNGELISKVSVNAIHGQIVVAARDTVYFLLCVIEEMGGLDI 527

Query: 521  TEVKHAQLEYEISCLDINPIGENPSY-SQIAAVGMWTDISVRIFSLPDLNLITKE----- 574
              V   + E EI+CLDI+  G++ +       + +W+   + +  LPDL  ++ E     
Sbjct: 528  NLVAERKFEDEIACLDISNEGDDHTKPGTFMVLALWSTFCMEVVQLPDLKTVSCERRSLL 587

Query: 575  -------------HLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 621
                         +L  +I+PRS++    E + YLL A GDG L+ ++ ++KTG   + K
Sbjct: 588  ETVLSYLSQVCQTNLPSKIVPRSIVATCIEEVHYLLIAFGDGALVYYVFDIKTGTHGEAK 647

Query: 622  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 681
            K S+GT+P TL    +KN  H+F  SDRP +I+SS+KKL++SNVN+K V+ +C  +S+++
Sbjct: 648  KSSVGTRPPTLYRVRNKNRQHLFVCSDRPVIIFSSSKKLVFSNVNVKVVNTVCSLSSSSY 707

Query: 682  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE-- 739
             D L I+    +  GT+DDIQK+H+RSIP+GE   RI +Q  S T+ +CS + +S  E  
Sbjct: 708  CDCLVISDGISMVFGTVDDIQKIHVRSIPMGESVLRIAYQRSSGTYGVCSSRTESKRERI 767

Query: 740  ----------------------------ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
                                        +S   F+ +LD  TF+   ++  +       I
Sbjct: 768  YASKNAIYTSNSRPKITSTRNEANDNPPKSTSSFM-VLDQNTFQRSGSFS-NNIRKTYMI 825

Query: 772  LSC---SFSDDSNVYYCVGTAYVLPEENEPTKGRILVF---IVEDGKLQLIAEKETKGAV 825
             SC    F++DS VYY VGT  + PEE +   GRI+VF    VE  KL+ + +   +G+ 
Sbjct: 826  FSCISGQFTNDSKVYYIVGTGLIYPEETDTKFGRIVVFEVDEVERSKLRRVHDLVCRGSP 885

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 885
             +L   NGKL+AAIN  ++L++W +     +EL+ EC +  HI+AL ++   + + V D+
Sbjct: 886  LALRILNGKLVAAINSSVRLFEWTM----DKELRLECSNFNHIMALDLKVMNEEVAVADV 941

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGAT 944
            M+S+SLL Y+  EG  EE A+D+N+ WM   E +  +  LG E + NLFTV    S   T
Sbjct: 942  MRSVSLLSYRMLEGNFEEVAKDWNSEWMVTCEFITAEQILGGEAHLNLFTVEVDKSRPIT 1001

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
            D+ R  LE  G Y+LGE        SLV +  D  +     ++FGT  G IG++  +  +
Sbjct: 1002 DDGRYVLEPTGYYYLGELPRVMVRSSLVAQPDDCSIQYSQPIMFGTNQGSIGMVVQIDDK 1061

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
               FL  ++  +   +K    + H  +RSF  +K+      F+DGDL+ES LD+ R+   
Sbjct: 1062 WKKFLIAVEKAIADSVKNCMHIEHTTYRSFIFQKRLESPTGFIDGDLVESILDMDRSAAI 1121

Query: 1065 EI-----SKTMNVSVE----ELCKRVEELTRLH 1088
             I      K  + S+     E+ K +E+L R+H
Sbjct: 1122 AILYKVSDKGWDASLPRDPIEILKVIEDLARMH 1154


>gi|341884150|gb|EGT40085.1| CBN-DDB-1 protein [Caenorhabditis brenneri]
          Length = 1134

 Score =  607 bits (1565), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 383/1151 (33%), Positives = 632/1151 (54%), Gaps = 87/1151 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y V++ K + V  S VGNFT  + +NLI+A+   I++ L++P+GL+ +  +PIYG++ +
Sbjct: 4    SYCVSSKKASVVVDSVVGNFTGHENVNLIVARGNTIDVQLVSPEGLKNVCQIPIYGQVLS 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            L L +   +++  L + TE++   +L +      ++TRA G + D  GR  DN    +  
Sbjct: 64   LALVKAKRDSRQSLVVLTEKWHMSILAY--RDGAIVTRAAGCILDPTGRTVDNF-FTLSV 120

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPT--IVVLYQ 182
                LI +  ++G+ K+I ++    L+  FN+R +   V + KF+            +++
Sbjct: 121  HRSGLIAIKAFEGIVKLIQWEAGADLRH-FNVRFDFPNVSEFKFVDTTEDDVYRAAFIFE 179

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA 242
            D+ + +H++  ++ + DK+F      Q ++   + +LIPVP P+ GV+++G  +++Y S+
Sbjct: 180  DD-NGKHLQFSDLNMHDKEF-RPHLRQTSIAADSSMLIPVPSPISGVVVLGTHSLLYKSS 237

Query: 243  -NAFKAIP-----IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK----VTGL 292
             N  + +P     +  +I  ++  VD  G R+++ D  G L +L++   + +    V  +
Sbjct: 238  ENDGEVVPYSSPLLENTIFTSHSIVDPTGERFIVSDTDGRLLMLLLNAVENQSGLSVKEI 297

Query: 293  KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIV 352
            +I+LLG+TS+A +I+Y+DN VV+IGS +GDSQLI+L L      SY+ VL+ Y N+GPI 
Sbjct: 298  RIDLLGDTSVAESINYIDNGVVFIGSRFGDSQLIRL-LSEKTNSSYISVLDTYYNIGPIR 356

Query: 353  DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP 412
            D  +V  E  GQ Q+VTCSGA KDGSLR++RNGIGI E A+V+L G+ G++ +R   D  
Sbjct: 357  DMIMV--ESDGQPQLVTCSGAEKDGSLRVIRNGIGIEELATVDLPGVVGIFPIR--LDSS 412

Query: 413  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI----YNQLVQVTSGS 468
             D +++VS + ET +L +  E ELE+ +     +   T+F            +VQVT   
Sbjct: 413  ADNYVIVSLVEETHVLQITGE-ELEDVQFLQIDTALPTMFAGTLFGPNDSGLVVQVTERQ 471

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANA--SQVLLATGGGHLVYL-----EIGDGILT 521
            VRL+S+    L   W+   G  ++    NA   QV +A    H+ +L     E+G   ++
Sbjct: 472  VRLMSNGG--LSKFWEPANGEMISKVAVNAVSGQVCVA-ARDHVYFLSCIVDEMGALDIS 528

Query: 522  EVKHAQLEYEISCLDINPIGENPSY-SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
             +   Q E EI+CLDI+  G++    +    +  W   S+ +  LPDL  + +  L   I
Sbjct: 529  VIAEKQFEDEIACLDISNEGDDADKPATFMVLAFWRTFSMEVVQLPDLKTVCQTDLPSRI 588

Query: 581  IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            +PRS++    E + YLL A GDG L  ++ ++KTG   + KK S+GT+P +L    +KN 
Sbjct: 589  VPRSIIATCIEDVHYLLVAFGDGALTYYVFDIKTGTHGEPKKSSVGTRPPSLHRVRNKNR 648

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
             H+F  SDRP +I+SS+KKL++SNVN+K V+ +C  +S  + D L I+    +  GT+DD
Sbjct: 649  QHLFVCSDRPMIIFSSSKKLVFSNVNVKVVNTVCSMSSRVYRDCLVISDGNCMVFGTVDD 708

Query: 701  IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE--------------------- 739
            IQK+H+R+IP+GE   R+ HQ+ S T+ +CS +  +  E                     
Sbjct: 709  IQKVHVRTIPMGESVLRVAHQKSSGTYGVCSSRTDTRFERITASKSAIGKSLSKPKVTAT 768

Query: 740  ---------ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY 790
                     +S   F+ +LD  TF+ + ++     E   S++S  F+DD+N YY VGTA 
Sbjct: 769  RNDMNETPPKSTSSFI-VLDHNTFQVLHSHTFGPHETAVSVISGQFNDDNNSYYIVGTAL 827

Query: 791  VLPEENEPTKGRILVFIVED---GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 847
            V P+E+E   GRI+VF V++    KL+ + E   +GA   +   NGKL+AAIN  +++++
Sbjct: 828  VYPDESETKIGRIIVFEVDETDKTKLRFMTEIVVRGAPMGIRILNGKLVAAINSSVRMFE 887

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
            W       +EL+ EC    HI A+ ++   + I V D+M+S+SLL Y+  EG  EE A+D
Sbjct: 888  WT----AEKELRVECSTFNHIAAVDLKVLNEEIAVADVMRSVSLLSYRTLEGNFEEVAKD 943

Query: 908  YNANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRF 966
            +N+ WM   E +  +  LG E + N+FTV    S   TD+ R  LE  G ++LGE     
Sbjct: 944  WNSEWMVTCEFITAESILGGEAHLNMFTVEVDKSRPVTDDGRYVLEPTGYWYLGELTKVM 1003

Query: 967  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 1026
                LV +  D+ +     +++GT  G +G++  +      FL  ++  +    K    +
Sbjct: 1004 IRAVLVPQPDDNSIRYTQPIMYGTNQGSLGLVVQIDDMYKKFLLSIEKAISDAEKNCMQI 1063

Query: 1027 NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI-----SKTMNVSVE----EL 1077
             H  +RSF   K+      F+DGDLIES LD+ R+R  EI     +K  + S+     E+
Sbjct: 1064 EHSTYRSFTYNKRIEPPSGFIDGDLIESILDMDRSRAIEILEKANTKGWDPSIPKDPVEI 1123

Query: 1078 CKRVEELTRLH 1088
             K +++L+R H
Sbjct: 1124 LKIIDDLSRTH 1134


>gi|339235331|ref|XP_003379220.1| DNA damage-binding protein 1 [Trichinella spiralis]
 gi|316978142|gb|EFV61158.1| DNA damage-binding protein 1 [Trichinella spiralis]
          Length = 1329

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 359/1170 (30%), Positives = 620/1170 (52%), Gaps = 97/1170 (8%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            NY+VTA   T VTHS  G+FT+P   +LII K +R E+H ++ +GLQ + +  ++GRI  
Sbjct: 171  NYIVTAKAATAVTHSLHGSFTAPGSSDLIIFKNSRFEVHSVSAEGLQYVTEGKMFGRIGA 230

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
             +LF P GE +  + I T +    ++++D  +  + T A  ++S+  GRP  NG +  + 
Sbjct: 231  AKLFTPKGENKALMVIVTLKQDVAIVEYD--NGRIKTLASRNISENFGRPASNGILLSVH 288

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
            PD  +IGL +    FK I ++        +++      + D  FL+G   P I ++Y D 
Sbjct: 289  PDGEVIGLRIMSSTFKCITWNRATSKLSTYSLNYSLTHLSDFVFLHGFQFPVIALIYGD- 347

Query: 185  KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA 244
               RHV T  ++L +++F  GPWS+ +++  A  LI VPPPLCGV+++G  +++Y   N+
Sbjct: 348  LVGRHVITCRISLDEQEFENGPWSRGHIEWEAHTLIAVPPPLCGVIVVGCSSLLYIRDNS 407

Query: 245  FKAIPIRPSITKAYGRV-DA--DGSRYLLGDHAGLLHLLVITHE-----KEKVTGLKIEL 296
              +    P ++K+     DA  DG  Y LG   G L LL +  E     K  ++ ++  +
Sbjct: 408  TISTVSPPFLSKSIVNCYDAAPDGLTYFLGQLDGTLSLLKLDIETDAEGKVTLSRMRATI 467

Query: 297  LGETSIASTISYL-DNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
            LG TS   ++SY+   +++++GS   DS+L++LN       ++ EV E + NL PIVD  
Sbjct: 468  LGVTSPPDSLSYMHKESLLFVGSRIADSKLLRLNSLAICDETWTEV-ESFPNLAPIVDMV 526

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDT 415
            +VD+ +QGQG++++CSG  KDGSL+++R+GIG+ E A +++  +  +W+LR  T++P+D 
Sbjct: 527  LVDMAKQGQGEIISCSGYGKDGSLKVIRSGIGLYELARLDIPFVNRVWALRYITNEPYDN 586

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF---CHDAIYN-QLVQVTSGSVRL 471
              ++  +  + ++    E++ E+  ++G  +  QT     CH A     +VQV    ++L
Sbjct: 587  LFILGVVGNSTMVIKFQENQAEQISVDGLETAEQTFVAANCHMADGALAIVQVVRSKIQL 646

Query: 472  VSST--SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLV-YLEIGDGILTEVKHAQL 528
              ++   R+L +EWK P G  V++A    +   L     H++ Y  + D  L  V    +
Sbjct: 647  ADASLDGRKL-DEWKFPDGSEVSLAACEGTSGRLLVACRHILHYFNVRDDRLQLVTTRTM 705

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLC 588
            E E SC++   + +      +  VG WT I +++  +P L  +   +L    + RS L+C
Sbjct: 706  ENEASCVEFGCLSDEGV--GVCIVGHWTKICLQLLFVPSLEPVQTVYLEDSSVIRSALMC 763

Query: 589  AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 648
             FE   YL  +L DG+L+ + ++  +  L D KKVSLGT  I+L+ F +KNT  + A ++
Sbjct: 764  KFESNMYLFVSLADGNLIFYSIDENSFALIDGKKVSLGTDSISLKMFKTKNTLSILACTE 823

Query: 649  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRS 708
            +PTVIY +N KL +S+++   + +M P  ++A+ + +       LTIG +D+I+KLHIRS
Sbjct: 824  KPTVIYMNNNKLQFSSLDSSAIYYMTPLFTSAYDNGVLFTNGQCLTIGVVDEIKKLHIRS 883

Query: 709  IPLGEHPRRICHQEQSRTFAICSLK---------------NQSCAEES------------ 741
            + LGE PRRI  Q +++   + +++               N++    S            
Sbjct: 884  VVLGETPRRIVWQPENKLVGVLTIRIMDLPGNSSSESSASNRALHSASAPPLRRTTLTVD 943

Query: 742  -----------------------EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
                                   E H   LLD  +F+ +  Y ++  E   SILSC+  +
Sbjct: 944  PNSAINEGAVNIGAEDTGVDRSIETHSFLLLDQNSFDVLHAYSMNPLEECTSILSCTMGE 1003

Query: 779  DSNVYYCVGTAYVLPEENEPTKGRILVFIVE-DGK----LQLIAEKETKGAVYSLNAFNG 833
            D N ++ +  A +  +E EP +GR+L+   E DG+    L L+ EKE  G VY++ +F  
Sbjct: 1004 DQNPFFILSAAVITADETEPLQGRLLMLRYERDGQGNSSLNLVHEKEVNGCVYAMASFKS 1063

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            KLL A+N  + L++W   D    +L S C     + A++++ R + I+VGD+ +SI++L 
Sbjct: 1064 KLLVAMNSSVLLFEW--SDVTGLQLVSSCSL--FVTAMHLKVRDEVILVGDIQRSIAVLR 1119

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            Y   E +  E ARDY+ NW+SA+E++D+D ++ AEN+ N+   +K+ +     E   ++ 
Sbjct: 1120 YVPSESSFVEEARDYHPNWISAIEVIDNDYFMAAENSLNITVSQKDLQQQPVSESQVVKS 1179

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-VIFGTVNGVIGVIASLPHEQYLFLEKL 1012
             G  HLGE++N F+HG+L M         +   ++ GT  G I +   +    +  L  L
Sbjct: 1180 AGRLHLGEYINVFKHGALSMYSYAGISSLVSNPIMIGTAEGSILIYCQIHDSHFRVLNDL 1239

Query: 1013 QTNLRKVI-KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI----- 1066
            Q     ++   VG + ++ +R +   +K   A  F+DGDLIE  L++ R     +     
Sbjct: 1240 QRCFSDIVPDNVGCIAYDSYRRYVVYEKNAPAFGFIDGDLIEQLLEMPRQEAIRLINGWI 1299

Query: 1067 -------SKTMNV-SVEELCKRVEELTRLH 1088
                    +  N+ + +++   +EEL+R+H
Sbjct: 1300 AAGRISPERCSNITTAQQIIDLIEELSRIH 1329


>gi|297815870|ref|XP_002875818.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297321656|gb|EFH52077.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 987

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 381/1104 (34%), Positives = 588/1104 (53%), Gaps = 133/1104 (12%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            M +W + +   KPT VTHSC G+FT P+E NL+I K + + I+L+T  GL+ + + P+YG
Sbjct: 1    MYLWFWGL--RKPTAVTHSCYGHFTGPKEQNLVICKVSLVSIYLMTENGLEHLREFPMYG 58

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            R+  +EL   +   +D LFIATE  K C+  WD ++S + +                   
Sbjct: 59   RVVFMELSHLNNLRKDVLFIATETEKLCMFDWDVQTSNVFS------------------- 99

Query: 121  GIIDPDCRLIGLHLY---DGLFKVIPFDNKGQLKEAFNI-RLEELQVLDIKFLYGCAKPT 176
              +D    +  L +Y   D  ++   F   G + +   I  L    ++D+KFL    +P 
Sbjct: 100  --LDTIQYVPNLEMYQIEDESYEYYDFCQGGTIFDGKTIVLLSSTNIVDVKFLKSYLRPG 157

Query: 177  IVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEET 236
            + +LY+                                   LLIP    L   LIIG++ 
Sbjct: 158  LALLYRTIMPT------------------------------LLIP---NLFSYLIIGKKG 184

Query: 237  IVYCSANAFKAIPIRPSITKAYGRVDADG--SRYLLGDHAGLLHLLVIT-HEKEKVTGLK 293
            +VY S N  K   +     + YGRV+      RY+LG H G + +L I  +  E+++GL 
Sbjct: 185  VVYYSDNEIKTKLMGSLDIQTYGRVEETRHMCRYILGGHDGHISVLEIKINTAERLSGLT 244

Query: 294  IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL----QPDAKGSYVEVLERYVNLG 349
             + LG+ S+ S+I+YL + +V++GS Y DSQL+K++       +     ++VL  Y N G
Sbjct: 245  FKPLGKISVPSSITYLRDDIVFVGSRYADSQLVKMHQLHGPSLNTNTPALQVLTTYTNSG 304

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 409
            P++DF + + +  G  ++V C G ++D SL  V  G+GI+ +   E+  I+ +WSL+SS+
Sbjct: 305  PVIDFSLCN-KPIGVRKLVMCCGTHEDSSLEGVSTGVGISVKFFAEIPNIQRIWSLKSSS 363

Query: 410  DDPFDTFLVVSFISETRILAMNLED--ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
             +    FLV+  I+    L   ++D        + GF   + T+ CHDA     +QVT  
Sbjct: 364  LNDNHPFLVLQPIAVAPALVFTIDDTGAFMSHTMVGFAYDSVTICCHDAADRLFIQVTEK 423

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
            SVRL+ S +  LR+EW +     +  A+A   QVLLAT    LVYL+I +GIL + K  Q
Sbjct: 424  SVRLIDSKTGVLRSEWLASS--KILFASATIKQVLLATLDKQLVYLDIRNGILVQAK-VQ 480

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLL 587
              Y++SCLDI P+G N +YS++AAVG+W + S+ +  LP+L ++T EH+   + PR +LL
Sbjct: 481  KGYDVSCLDIGPVGSNTTYSKLAAVGLW-EKSILVLKLPELEVLTVEHVHAHV-PRCILL 538

Query: 588  CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV-FAA 646
            CAFE +SYLLCAL DG LL F LN   G+L ++    L   P TLRTF S  +    F+ 
Sbjct: 539  CAFEQVSYLLCALADGSLLTFKLNEDDGQLQEKNTKELEGYPKTLRTFISNGSVRACFST 598

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 706
            S  PT+I++  +KL Y+ +NL ++  MCPF  A   + LAI  +  + I T+ D++  +I
Sbjct: 599  SKVPTLIFTMKQKLQYNRLNLTDIEDMCPFQRADISEGLAIVTKDGVVICTMGDMET-NI 657

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFE 766
            + IP+  + RR+CHQE+S+T+A+         E+   H ++LLD +     S + L+  E
Sbjct: 658  K-IPMFSYGRRLCHQEESQTYAVL------VEEKDGRHSLQLLDKELNTLFS-FELNEHE 709

Query: 767  YGCSILSCSFSDDSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 825
            +G SI+SCSF+ D   YYCVGT+  VL EEN  T+GRILVF+V DG+L +I +  T GAV
Sbjct: 710  HGLSIVSCSFAGDDQAYYCVGTSVNVLDEEN--TQGRILVFLVRDGELNIIFQYPTNGAV 767

Query: 826  YSLNAFNGKLLAAIN-QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 884
            Y L   NG LL  ++   I  ++WML DD  REL                          
Sbjct: 768  YYLKPLNGGLLVTVSVHTIHYFEWMLHDDA-RELH------------------------- 801

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
               SI+  +   E+G  E+R    ++    +        Y  A+  +++     +++G  
Sbjct: 802  ---SINPEVVGIEDGGWEQRFAVTSSRIQKS--------YFYADGLYSI----HSADGVN 846

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
            D   G    VG+++LG+ +   + G+L  RL D D   +P+V+F TV+G +G+I SLP  
Sbjct: 847  D--HGYPNTVGQWYLGQSITHMKAGTL-SRLSDEDSAIVPSVMFSTVSGAVGMIVSLPPV 903

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
             Y FL KL+  +R+ I+G+G  N +  R     +   ++  FLDGD IESF  L     +
Sbjct: 904  IYEFLHKLEQYMREQIRGIGCPNEDFPRMCVELQSLSESTEFLDGDFIESFQILDIDDQE 963

Query: 1065 EISKTMNVSVEELCKRVEELTRLH 1088
            E+++ M V+VE++ K VE L  LH
Sbjct: 964  EVAEEMEVTVEDIRKIVEYLKLLH 987


>gi|345570887|gb|EGX53705.1| hypothetical protein AOL_s00006g33 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1133

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 368/1153 (31%), Positives = 612/1153 (53%), Gaps = 92/1153 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+ +++ H+   +F    + +L+IAK  RIE++ L P+GL+ +    +YGR+  L
Sbjct: 3    YLAPIHRASSIRHAIKCHFIHADKESLVIAKSNRIEVYDLIPEGLEQVAHFAVYGRVTGL 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
               RP     D LF+ T+RY++  + WD+++  +   R   DV+DR  RP   G + + D
Sbjct: 63   LSLRPQQSTLDHLFLGTDRYEYFTVSWDSQTGTIRNERKAHDVTDRFQRPAQVGHLYLAD 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNK---------------GQLKEAFNIRLEELQVLDIKFL 169
            P  RL+GL+LY+G+F  IP   +               G L +   IR+ EL+V+++ FL
Sbjct: 123  PGGRLLGLYLYEGIFTAIPIKRQSKGRGRHAQLPEAEIGNLDDPCPIRMNELKVINMVFL 182

Query: 170  YGCAKPTIVVLYQDNKDARHVKTYEV-----ALKDKDFVEGPWSQNNLDNGADLLIPVPP 224
            YG + P I VLY D+K   H+ TYE+     A+KD +F +     NNLD+GA LLIPV  
Sbjct: 183  YGTSVPVIAVLYTDSKKLVHLITYELNVAKRAVKDPEFAQWGIKANNLDHGAKLLIPVDN 242

Query: 225  PLCGVLIIGEETIVYCSANAFKAIPIR-----PSITKAYGRVDADGSRYLLGDHAGLLHL 279
            P  G+L+IGE+ + Y      + +P++     P+    +G++D +  RYLL D  G L+L
Sbjct: 243  PTGGILVIGEQVVSYFHPE--RTVPMKKPLHEPTSFVTHGKIDPE--RYLLSDELGHLYL 298

Query: 280  LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYV 339
            L++  E  K+  ++IE LGE   A  I YLDN  V++GS +GDS L++++    +KG  +
Sbjct: 299  LLLIIENNKLINMRIENLGEVCQARAIVYLDNGYVFLGSHFGDSTLVRIS----SKGPRI 354

Query: 340  EVLERYVNLGPIVDFCVVDLE---------RQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
            EV++   NL PI DF V+  E           GQ  ++TCSG + DG LR VR+G+GI +
Sbjct: 355  EVVQSLPNLAPISDFIVLGTEVGGVEIHQYSAGQTMILTCSGGFYDGGLRSVRSGVGIRD 414

Query: 391  QASV-ELQGIKGMWSL-RSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFCSQ 447
               + E+ G++ MW+L R+  D+ FD  L+ SF +E+R  A   + E+EE +  E F   
Sbjct: 415  IGLLGEMSGVQNMWALKRAILDNGFDDTLLFSFANESRAFAFGADGEVEEVDTFENFFLD 474

Query: 448  TQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGG 507
            T TL   +   ++LVQVT   V +V   + +L N W  P G  + +A+ + +++++   G
Sbjct: 475  TTTLEAGNVGNDKLVQVTPFKVIVVEKATSKLWN-WAPPVGAKIVMASLSGARLVVVLNG 533

Query: 508  GHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD 567
               +  ++    + ++ +   E EISC+ I P  +    S    VG W   S+ +  + D
Sbjct: 534  RICLLFDLSSEPIKQIANRTFENEISCIHI-PTKQ----SDFLVVGFWMPASLALLRIAD 588

Query: 568  LNLITKEHLG---GEIIPRSVLLCAFE--GISYLLCALGDGHLLNFLLNMKTGELTDRKK 622
            L  + +EHL    G  +PRSV++   E  G S L   + DG ++++ +    G L D+K+
Sbjct: 589  LETMKEEHLAVFEGS-VPRSVMVANMEGDGPSSLFVGMADGEVISYTITEGPGILDDQKR 647

Query: 623  VSLGTQPITLRTFSSK---NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 679
            + LGTQ +T      K   +++ V A  +RPT++Y    + +YS + L + S +  FN+ 
Sbjct: 648  IRLGTQTVTFEALPRKTGDDSSCVIATGERPTMVYGEEGRTVYSAITLNQASSVVAFNAE 707

Query: 680  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ---S 736
            AFPD++ +A +  + I  ID+ +  H R  PL +  RR+   ++ + + + +++N    +
Sbjct: 708  AFPDTVVVATDESVFIAKIDEARTTHTRMSPLCQFARRVAFSKEKKAYGVATIRNSIDTT 767

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLP 793
               ES   ++ ++D+  ++ I  Y L   E   S+L  S ++        + VGTA +  
Sbjct: 768  TGMESSSCYIHVIDENFYDKIDAYELYPNELVESLLCASLANPDGTISEKFVVGTA-IGN 826

Query: 794  EENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW-MLR 851
            + +E   GR+L   +  D  L+LI E E  GA +SL    G +LA +++ I LY++   R
Sbjct: 827  DSDESEHGRLLFLELGADKMLRLITELELPGACHSLAIVKGYILAGLSKSIDLYRFSYTR 886

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL--IYKHEEG--AIEERARD 907
                  +Q         L + +   G  + VGDL+K + +L  +    EG   + E  R 
Sbjct: 887  GSLGASIQQISSIRAATLPVSLSVYGKRVFVGDLVKGVMVLEVVEGGGEGNDKLVEVCRQ 946

Query: 908  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
            Y  +W++A+E LD+D  + A+++ NL  +R+ S GATDE+  R+  + E  LGE VN  R
Sbjct: 947  YGVSWVTALEALDEDTCISADSDGNLVLLRRESTGATDEDTRRMRPLSEIRLGEMVNCIR 1006

Query: 968  HGSLVMRLPDSDV-GQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 1024
                  R+ D    G +  P    GTV+G + ++  +  + +  L K Q N+ KVIKG+G
Sbjct: 1007 ------RVNDPITQGYVVQPKAYLGTVDGGLFMLGLIHPDYFDILMKCQVNMAKVIKGIG 1060

Query: 1025 GLNHEQWRSFNNEK-KTVDAKNFLDGDLIESFLDLSRTRM--------DEISKTMNVSVE 1075
             L+  ++R++N +  +  +   F+DG+L+E FLDL    M        D+ +  +  +V 
Sbjct: 1061 DLDFNRYRAYNTKGIQPEEPFRFVDGELVEKFLDLDEDAMRMVIDGANDDDNSQIECTVG 1120

Query: 1076 ELCKRVEELTRLH 1088
            E+   VE L RLH
Sbjct: 1121 EMKNIVETLKRLH 1133


>gi|390366809|ref|XP_780126.3| PREDICTED: DNA damage-binding protein 1-like isoform 1
            [Strongylocentrotus purpuratus]
          Length = 630

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/565 (51%), Positives = 375/565 (66%), Gaps = 59/565 (10%)

Query: 579  EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            EIIPRS+LL  FEG +Y+LCALGDG L  F LN +TG +TDRKKV LGTQP  L+TF S 
Sbjct: 70   EIIPRSILLTTFEGQNYILCALGDGSLFYFQLNAETGYMTDRKKVILGTQPTVLKTFKSL 129

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            +T +VFA SDRPTVIYSSN KL++SNVNLKEVS+MCP NS  +PDSLA+  +  L IG+I
Sbjct: 130  STVNVFACSDRPTVIYSSNHKLVFSNVNLKEVSYMCPLNSDGYPDSLALCNDTTLMIGSI 189

Query: 699  DDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN----------------QSCA---- 738
            D+IQKLHIR++PLGE P RI +QE S+TF I S +                 QS +    
Sbjct: 190  DEIQKLHIRTVPLGETPLRITYQEPSQTFGIISTRTDVVDSSGTTASMGQTRQSASTSAL 249

Query: 739  -------------------------EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
                                     +E E+H + ++D  TFE +  +   + EY  S++S
Sbjct: 250  NITKSGGNKGMAGQAGGSGEGSSFGDEVEVHSLLVIDQHTFEVLHAHHFGSSEYATSLIS 309

Query: 774  CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNG 833
            C   +D N YY VG A V P+E EP  GRI+VF   DGKLQ IAEKE KGA YSL  FNG
Sbjct: 310  CKLCNDPNWYYIVGLANVHPDEAEPKSGRIVVFQYSDGKLQEIAEKEIKGAPYSLVEFNG 369

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            KLLA++N  ++L++W         L+ EC H+ ++LALY++T+GDFIVVGDLM+SI+LL 
Sbjct: 370  KLLASVNSVVRLFEWTPE----HSLRVECSHYNNVLALYLKTKGDFIVVGDLMRSITLLA 425

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            YK  EG +EE ARDY+ NWMSAVEILDDD +LGAEN+ NLFT +K+S   TDEER  L+ 
Sbjct: 426  YKPMEGCLEEIARDYSPNWMSAVEILDDDTFLGAENSSNLFTCQKDSAATTDEERRHLQE 485

Query: 954  VGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
            VG +HLGEFVN FRHGSLVM+ + +S +    +V+FGTV+G +G++  L  E Y FL ++
Sbjct: 486  VGLFHLGEFVNVFRHGSLVMQNIGESTIPTTGSVLFGTVSGSVGLVTQLNEEFYRFLLEV 545

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
            Q  L KVIK VG + H  WRSF +E+KT    NF+DGDL+ESFLDLSR  MDE+++ + +
Sbjct: 546  QNKLTKVIKSVGKIKHSFWRSFYSERKTEPMDNFIDGDLLESFLDLSRDTMDEVAQGLQI 605

Query: 1073 S---------VEELCKRVEELTRLH 1088
                        +L K VEELTR+H
Sbjct: 606  DDGGMKRDCMANDLIKIVEELTRIH 630



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 57/71 (80%)

Query: 617 LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
           +TDRKKV LGTQP  L+TF S +T +VFA SDRPTVIYSSN KL++SNVNLKEVS+MCP 
Sbjct: 1   MTDRKKVILGTQPTVLKTFKSLSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVSYMCPL 60

Query: 677 NSAAFPDSLAI 687
           NS  +PD   I
Sbjct: 61  NSDGYPDRYEI 71


>gi|223994993|ref|XP_002287180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976296|gb|EED94623.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1517

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 466/1446 (32%), Positives = 661/1446 (45%), Gaps = 380/1446 (26%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ-----------GLQ 51
            I +YVVTA    +V  +   +F +P   +LIIAK  R+EI                  L 
Sbjct: 18   IGHYVVTAQPSGSVLAAVRCSFLAPDSTDLIIAKSNRLEIRQYQSSTNPNDDNNNSDLLP 77

Query: 52   PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
             +L +PI GRI +L   +      D LF  TER  + ++ +D + ++L   A+   +   
Sbjct: 78   LLLTLPINGRITSLAPIKYSSSNTDCLFFTTERGCYALISYDEQLAQLQFNAVTSTTSST 137

Query: 112  G----RPTDN----------------------------------GQIGIIDPDCRLIGLH 133
            G    +  D+                                  G I  +DP  R I LH
Sbjct: 138  GGEETKDHDDSAIIGLHYPIQTHATGSFASYSSSVIAGGCQAECGPIMTVDPLNRCIALH 197

Query: 134  LYDGLFKVIPFD-----------------------NKGQLKEAFNIRLEELQVLDIKFLY 170
            +YDG   VIP +                       + G   +AF+ R+EE  +L + FL 
Sbjct: 198  VYDGWVTVIPINRGYDVGSARASSSSSRGGKPRGLSTGPFGDAFHARVEERTLLSMTFLR 257

Query: 171  GCAK----------------PTIVVLYQDNKDARHVKTYEVALKDKDFV----------- 203
              +                 P +VVL+QD +  +HV T+ V L  K  V           
Sbjct: 258  PKSNAGGRGNSGGGVSSYYHPQLVVLHQDARGFQHVITHGVDLAKKGLVLHGSPNDSAVA 317

Query: 204  --------EG--PWS----------QNNLDNGADLLIPVPP----PLCGVLIIGEETIVY 239
                    EG  P S          ++ +D G+  LI +PP     L GVLI+G+  I Y
Sbjct: 318  TMMGVKSDEGKMPSSTMPPANERLKKSRIDGGSAALIAIPPSKTSALGGVLILGQRQITY 377

Query: 240  --CSANAFKAIPIRPSITKAYGRV-DADGSR----------YLLGDHAGLLHLLVI---- 282
                    + +PI  S+  +Y  V D D  R          Y+LGD  G +HLL I    
Sbjct: 378  HHTGEGITRTLPIGSSLLYSYCLVADKDADRNINNNAPVLKYILGDSTGRIHLLTILLNV 437

Query: 283  THEKEK---VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP------- 332
            T E +    VT L +E LG  S AS + YL    +++GS +GDSQL+K+   P       
Sbjct: 438  TPEGKGDGCVTTLLMETLGTASSASAVVYLGKGCLFVGSQFGDSQLLKILDAPVPLSGGR 497

Query: 333  DAKG---------SYVEVLERYVNLGPIVDFCV---VDLERQGQGQ-------------- 366
            D +G         +Y+ +L+ Y NLGPIVDF +    D    G G               
Sbjct: 498  DDEGEEKNPLEETTYLRLLDEYTNLGPIVDFDLRPCSDATSGGHGNAKNDSKSRDQHRQS 557

Query: 367  -VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
             VVTCSG  KDG++R+VRNG+G+ E A VE+ GIKGMWSLR +  D  D+FLV SF+ ET
Sbjct: 558  LVVTCSGVGKDGTVRLVRNGVGMREHAEVEMPGIKGMWSLRRTFADEDDSFLVQSFVRET 617

Query: 426  RILAMN----------------LEDELEETEIEGFCSQTQTLFCHDAIYNQ---LVQVTS 466
            RIL +                     L E  I GF S   TLF  + +      L+QV  
Sbjct: 618  RILGVQSGGEAEMEEEDDEDQEEGGALAEVTIPGFSSSKSTLFAGNLLVGSSDLLLQVVE 677

Query: 467  GSVRLVSSTSRELRNEWK------------SPPGYSVNVATANAS-QVLLATGGGHLVYL 513
             SVRLV+S + EL  EW              P G+ + VA+AN+S Q+++A  GG LVYL
Sbjct: 678  DSVRLVNSETLELVTEWSPFSNDNEGSDDDEPLGF-ITVASANSSGQIVVALRGGTLVYL 736

Query: 514  EI-GDGI--LTEVKHAQLEYEISCLDINP-----IGENP------SYSQIAAVGMWTDIS 559
             + GD    +  +K   L+ EISC+D+NP     +G N        +S++ AVG+W D S
Sbjct: 737  VVEGDASPSIRRLKRVTLDREISCIDLNPFDDTAVGGNTMDVDGGHHSKLVAVGLWDDFS 796

Query: 560  VRIFSLPD----------LNL-ITKEHLGGE---------------IIPRSVLLC----- 588
            VR+  L            +NL +  ++ GG+               ++ RS+ L      
Sbjct: 797  VRLLDLSSSHSVLDQVLQINLGVGNDNGGGKSAEEDDDELGESSQHMMARSLCLVTLDSH 856

Query: 589  -------------AFEG---ISYLLCALGDGHLLNFLL-----NMKTGELTDRKKVSLGT 627
                         +F G   +  LL  LGDG L++F +     + K   +  RK+VSLGT
Sbjct: 857  SSNSSSLINKKSDSFTGSNKVDMLLVGLGDGKLISFAVVHSAASSKKWFVHSRKEVSLGT 916

Query: 628  QPITLRTFSS-KNTTHVFAASDRPTVIY--------SSNKKLLYSNVNLK------EVSH 672
            Q I L   SS  N T V A  DRPTV+Y        +SN KL YS ++L       E  H
Sbjct: 917  QGIHLIPMSSGSNGTCVLATGDRPTVVYLTGGNGGGNSNPKLCYSTISLTVEDDDDEDGH 976

Query: 673  MCPFNSAA--------------------FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
                N +                        SL +A E  L +G IDDIQKLH+ S  LG
Sbjct: 977  ASHRNVSVNVASSFRSSLLFSSSNSTSNHNYSLCVADETTLRLGMIDDIQKLHVTSYKLG 1036

Query: 713  EHPRRICHQEQSRTFAICSL--------KNQSCAEESEMHFVRLLDDQTFEFISTYPLDT 764
              PRRI + E  R + +  +         NQ  AE +  + VR  DD TFE I+   L+ 
Sbjct: 1037 MTPRRIAYHEAGRVYCVGCIDGNAKGGNNNQVGAEINMGNCVRFFDDSTFEEINQIDLEP 1096

Query: 765  FEYGCSILSCSFSDDSNV---------------YYCVGTAYVLPEENEPTKGRILVFIVE 809
            FE   S++S S    S                 Y  +GTAY  P+E+EPT+GRILV    
Sbjct: 1097 FETILSLVSVSLCTSSQTLTQSNSKQDTSEYKPYILIGTAYAYPDEDEPTQGRILVVECN 1156

Query: 810  DGK------------------LQLIAEKETKGAVYSLNAF-NGKLLAAINQKIQLYKWML 850
             G+                  ++ + +  T+G VYS++ F  G +LA +N K  L +  +
Sbjct: 1157 SGEAEPHLKSDDDMEDTYSRYVRHVTQMPTRGGVYSISPFYGGTVLATVNSKTHLCRLSI 1216

Query: 851  RDDGTRELQ-SECGHHGHILALYVQTRG----------------DFIVVGDLMKSISLLI 893
              D   EL+    GHHGH+L+L+V++                     +VGDLM+SISL+ 
Sbjct: 1217 GCDQIGELKFVGAGHHGHMLSLFVKSLAGSESESESSGTNRQAKQLAIVGDLMRSISLVE 1276

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            Y+ +   IEE ARDYNAN+ +AVE+L +  YLG+E   NLF +R N+  +++E R RL+ 
Sbjct: 1277 YQPKHNVIEELARDYNANFCTAVEMLTNGTYLGSEGFNNLFVLRHNANASSEEARVRLDT 1336

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--------PTVIFGTVNGVIGVIASLPHEQ 1005
            VGEYHLGE  N+F  GSL+M  P +  G +           +FGTV+G IG +  L    
Sbjct: 1337 VGEYHLGEMTNKFMGGSLIM--PSNSGGIMGAQNAYVGSQTLFGTVDGSIGSVLGLDGPT 1394

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE 1065
            + FL  LQ  +  ++K VG ++HE++R+F  E++   ++ F+DGDLIE+FLDL+R  M+ 
Sbjct: 1395 FAFLACLQRAILSIVKTVGDISHEEYRAFRAERQVRPSRGFIDGDLIETFLDLNRPTMER 1454

Query: 1066 ISKTMN 1071
            I K MN
Sbjct: 1455 IVKYMN 1460


>gi|74208347|dbj|BAE26370.1| unnamed protein product [Mus musculus]
          Length = 599

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/548 (52%), Positives = 361/548 (65%), Gaps = 54/548 (9%)

Query: 591  EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 650
            E   YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRP
Sbjct: 56   ESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRP 115

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
            TVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++P
Sbjct: 116  TVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVP 175

Query: 711  LGEHPRRICHQEQSRTFAICSLK------------------------------------- 733
            L E PR+IC+QE S+ F + S +                                     
Sbjct: 176  LYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTA 235

Query: 734  --NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 791
                S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V
Sbjct: 236  PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMV 295

Query: 792  LPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
             PEE EP +GRI VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W   
Sbjct: 296  YPEEAEPKQGRIAVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE 355

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
                +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N N
Sbjct: 356  ----KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPN 411

Query: 912  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 971
            WMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSL
Sbjct: 412  WMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSL 471

Query: 972  VMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
            VM+ L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  
Sbjct: 472  VMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSF 531

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKR 1080
            WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K 
Sbjct: 532  WRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKV 591

Query: 1081 VEELTRLH 1088
            VEELTR+H
Sbjct: 592  VEELTRIH 599


>gi|256088964|ref|XP_002580590.1| DNA repair protein xp-E [Schistosoma mansoni]
          Length = 1329

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 353/1077 (32%), Positives = 564/1077 (52%), Gaps = 144/1077 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y VT  +PT V  +C G+FTSP +LNL+I K T +E+  +T +GL+ + DVPI  +I   
Sbjct: 5    YHVTTQRPTAVVKTCTGHFTSPNDLNLLICKNTYVEVFEVTCEGLKLVRDVPINAKIVAA 64

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             LFR      D LF+ T +    +++   + +S E +T A G V DR  R  D G   +I
Sbjct: 65   SLFRRKDRETDSLFLLTHKAGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFDVLI 124

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQ-LKEAF--NIRLEELQVLDIKFLYGCAKPTIVVL 180
            DP    I + LY GL K+I     G+ +   F    ++EE  ++D+ F+YG + PT  ++
Sbjct: 125  DPGANYIVVRLYHGLLKIILLQCIGEKIGTDFLDTNQIEEGNIVDMAFIYGYSLPTFAMI 184

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            Y+D     H+KTYE+  ++        + ++++  + LLIPVP P  GV+++G+  I Y 
Sbjct: 185  YEDEL-VLHMKTYEIYGREPVLRNVQLTLDSIEPDSKLLIPVPKPYGGVILVGDNIICYH 243

Query: 241  SANA---FKAIP-IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHE----------- 285
            + +     + IP  + S    Y  VDA   RYLLGD AG L+++ +  E           
Sbjct: 244  TKDGPHISQYIPQAKASQVLCYAAVDA--QRYLLGDMAGRLYMVHLLSEDISAAANNGTS 301

Query: 286  ------KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA-KGSY 338
                    ++  ++IELLGET+   +I+YLDN VV+IGS+ GDSQLI+LN  PD  + SY
Sbjct: 302  NSDSLSAVRIGSIRIELLGETATPESIAYLDNGVVFIGSTLGDSQLIRLNPDPDPERNSY 361

Query: 339  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 398
            + +LE Y N+GPIVD  +V LE +GQ Q++TCSGAYK+GSLR++RNGIGI+E A+++   
Sbjct: 362  ITILETYTNIGPIVD--MVLLETKGQNQLITCSGAYKEGSLRVIRNGIGIHEHATIDQDL 419

Query: 399  IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFC----- 453
            IKG W     +D  FD  +VVS + +T++L +  +D++    +EGF +  QT++C     
Sbjct: 420  IKGAWCFPIESDR-FDDTIVVSMVGQTQLLHL-ADDDITALHLEGFKTDEQTVYCATLSP 477

Query: 454  ---------------HDAIYNQLVQVTSGSVRLV---SSTSRELRNEWKSPPGYSVNVAT 495
                           ++ +   L+Q T+  +RL+   S  S+    EWK P G  ++  +
Sbjct: 478  ANDSPRPESMMIDENNNTLDPLLLQATTSGLRLIGIQSLCSKGCLTEWKPPTGRGISCLS 537

Query: 496  ANASQVLLATGGGHLVYLEIGDG---ILTEVKHAQLEYEISCLDINPIGENPSYSQI--- 549
            +    +++A+G    V   +G+       +V H Q+ +E++C+D+ P   + + + I   
Sbjct: 538  SFRHTIVVASGTELYVLKVVGESNNPKFEQVSHRQMSHEVACIDLTPFNRDRAIAAINAV 597

Query: 550  --------------------AAVGMWTDISVRIFSLPDLNLITKEHL-------GGEIIP 582
                                 AVG+W    + +  LP+L L+ +E L       G  ++P
Sbjct: 598  SSNHLDSTSSSTPDKSVPYLVAVGLWLGHGLALLKLPNLELVHEEPLPETTASTGTALLP 657

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE--LTDRKKVSLGTQP-ITLRTFSSKN 639
            RSVL+   E I+YL  A+GDG L  + ++       L D K+VS GT P + LR + S+ 
Sbjct: 658  RSVLIAQLEDIAYLFAAMGDGTLYFYTIDPSEDHVCLRDPKRVSAGTGPSMFLRQWRSQR 717

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
              +VF  S+ P VIYS   KL+++N+NLKEV+ M P N   + D +A+     L IG++D
Sbjct: 718  KVNVFVCSNHPCVIYSIKNKLIFANLNLKEVNFMTPLNGLFYSDCIALVTPTALIIGSVD 777

Query: 700  DIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR------------ 747
            +IQKLH+R++PL E P+R+  Q ++ +  + + + +   E      VR            
Sbjct: 778  EIQKLHVRTLPLEETPKRLALQSETSSLGVITYRQEMFQEGMGFKPVRSSISLSQKIPKS 837

Query: 748  ------------LLDDQTFEFISTYPLDTF--------------------EYGCSILSCS 775
                           ++ F  I    L  F                    E   SI S  
Sbjct: 838  ASRLPKTAPSSVSATERKFREIEVSSLLIFNQSNLEIQFAHNFYFSQTLVEVAVSIASVQ 897

Query: 776  FSDDSNVYYCVGTAYVLPEENEPTKGRILVFI--VEDGKLQLIAEKETKGAVYSLNAFNG 833
                +   + VGTA+++ +E EP+KGRI +F    E  +L  +   +  G+VY +  FNG
Sbjct: 898  SDIHNGPLFAVGTAFLVEDEVEPSKGRIHLFRWDPESSRLDTVLVHDVNGSVYRIVDFNG 957

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            +LLAAIN  ++L+   +++D    L+  C  + +I+ L+++ +GDF++VGDLM+S++LL+
Sbjct: 958  RLLAAINSSVRLFD--IKEDS---LRLACSFNENIIVLFLRRKGDFVLVGDLMRSLTLLL 1012

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 950
            +K      E   R  +  W + +EILDD+ +L AE   NLF V ++    T E   R
Sbjct: 1013 FKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVSRDLPENTKEPSFR 1069



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 32/180 (17%)

Query: 937  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGV 994
            + NS G + E + RL     +H G+FVN F  G+LV++  +     +  P  ++GTVNG 
Sbjct: 1154 KPNSSGVSGEMQ-RLVDCAYFHTGDFVNVFVRGNLVLQNAEERWTAVGYPGHLYGTVNGG 1212

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            +G++  +    + FL++++  L  ++  VGG +H+ WR+F  +++   A NF+DGDLIE+
Sbjct: 1213 LGLLVQVSPVLFAFLKEVEFRLSNLVVPVGGFSHDTWRAFKADREIKMAHNFVDGDLIET 1272

Query: 1055 FLDLSRTRMDEISK--------------------------TMNVSVEELCKRVEELTRLH 1088
              DLS   MD+ +K                          T   +VE+L K VEE++RLH
Sbjct: 1273 VTDLS---MDDKAKLVKGLRIPVNMNEFGTAGSTCTTDPETRECTVEDLVKVVEEMSRLH 1329


>gi|353232348|emb|CCD79703.1| putative dna repair protein xp-E [Schistosoma mansoni]
          Length = 1329

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 353/1077 (32%), Positives = 564/1077 (52%), Gaps = 144/1077 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y VT  +PT V  +C G+FTSP +LNL+I K T +E+  +T +GL+ + DVPI  +I   
Sbjct: 5    YHVTTQRPTAVVKTCTGHFTSPNDLNLLICKNTYVEVFEVTCEGLKLVRDVPINAKIVAA 64

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             LFR      D LF+ T +    +++   + +S E +T A G V DR  R  D G   +I
Sbjct: 65   SLFRRKDRETDSLFLLTHKAGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFDVLI 124

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQ-LKEAF--NIRLEELQVLDIKFLYGCAKPTIVVL 180
            DP    I + LY GL K+I     G+ +   F    ++EE  ++D+ F+YG + PT  ++
Sbjct: 125  DPGANYIVVRLYHGLLKIILLQCIGEKIGTDFLDTNQIEEGNIVDMAFIYGYSLPTFAMI 184

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            Y+D     H+KTYE+  ++        + ++++  + LLIPVP P  GV+++G+  I Y 
Sbjct: 185  YEDEL-VLHMKTYEIYGREPVLRNVQLTLDSIEPDSKLLIPVPKPYGGVILVGDNIICYH 243

Query: 241  SANA---FKAIP-IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHE----------- 285
            + +     + IP  + S    Y  VDA   RYLLGD AG L+++ +  E           
Sbjct: 244  TKDGPHISQYIPQAKASQVLCYAAVDA--QRYLLGDMAGRLYMVHLLSEDISAAANNGTS 301

Query: 286  ------KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA-KGSY 338
                    ++  ++IELLGET+   +I+YLDN VV+IGS+ GDSQLI+LN  PD  + SY
Sbjct: 302  NSDSLSAVRIGSIRIELLGETATPESIAYLDNGVVFIGSTLGDSQLIRLNPDPDPERNSY 361

Query: 339  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 398
            + +LE Y N+GPIVD  +V LE +GQ Q++TCSGAYK+GSLR++RNGIGI+E A+++   
Sbjct: 362  ITILETYTNIGPIVD--MVLLETKGQNQLITCSGAYKEGSLRVIRNGIGIHEHATIDQDL 419

Query: 399  IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFC----- 453
            IKG W     +D  FD  +VVS + +T++L +  +D++    +EGF +  QT++C     
Sbjct: 420  IKGAWCFPIESDR-FDDTIVVSMVGQTQLLHL-ADDDITALHLEGFKTDEQTVYCATLSP 477

Query: 454  ---------------HDAIYNQLVQVTSGSVRLV---SSTSRELRNEWKSPPGYSVNVAT 495
                           ++ +   L+Q T+  +RL+   S  S+    EWK P G  ++  +
Sbjct: 478  ANDSPRPESMMIDENNNTLDPLLLQATTSGLRLIGIQSLCSKGCLTEWKPPTGRGISCLS 537

Query: 496  ANASQVLLATGGGHLVYLEIGDG---ILTEVKHAQLEYEISCLDINPIGENPSYSQI--- 549
            +    +++A+G    V   +G+       +V H Q+ +E++C+D+ P   + + + I   
Sbjct: 538  SFRHTIVVASGTELYVLKVVGESNNPKFEQVSHRQMSHEVACIDLTPFNRDRAIAAINAV 597

Query: 550  --------------------AAVGMWTDISVRIFSLPDLNLITKEHL-------GGEIIP 582
                                 AVG+W    + +  LP+L L+ +E L       G  ++P
Sbjct: 598  SSNHLDSTSSSTPDKSVPYLVAVGLWLGHGLALLKLPNLELVHEEPLPETTASTGTALLP 657

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE--LTDRKKVSLGTQP-ITLRTFSSKN 639
            RSVL+   E I+YL  A+GDG L  + ++       L D K+VS GT P + LR + S+ 
Sbjct: 658  RSVLIAQLEDIAYLFAAMGDGTLYFYTIDPSEDHVCLRDPKRVSAGTGPSMFLRQWRSQR 717

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
              +VF  S+ P VIYS   KL+++N+NLKEV+ M P N   + D +A+     L IG++D
Sbjct: 718  KVNVFVCSNHPCVIYSIKNKLIFANLNLKEVNFMTPLNGLFYSDCIALVTPTALIIGSVD 777

Query: 700  DIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR------------ 747
            +IQKLH+R++PL E P+R+  Q ++ +  + + + +   E      VR            
Sbjct: 778  EIQKLHVRTLPLEETPKRLALQSETSSLGVITYRQEMFQEGMGFKPVRSSISLSQKIPKS 837

Query: 748  ------------LLDDQTFEFISTYPLDTF--------------------EYGCSILSCS 775
                           ++ F  I    L  F                    E   SI S  
Sbjct: 838  ASRLPKTAPSSVSATERKFREIEVSSLLIFNQSNLEIQFAHNFYFSQTLVEVAVSIASVQ 897

Query: 776  FSDDSNVYYCVGTAYVLPEENEPTKGRILVFI--VEDGKLQLIAEKETKGAVYSLNAFNG 833
                +   + VGTA+++ +E EP+KGRI +F    E  +L  +   +  G+VY +  FNG
Sbjct: 898  SDIHNGPLFAVGTAFLVEDEVEPSKGRIHLFRWDPESSRLDTVLVHDVNGSVYRIVDFNG 957

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            +LLAAIN  ++L+   +++D    L+  C  + +I+ L+++ +GDF++VGDLM+S++LL+
Sbjct: 958  RLLAAINSSVRLFD--IKEDS---LRLACSFNENIIVLFLRRKGDFVLVGDLMRSLTLLL 1012

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 950
            +K      E   R  +  W + +EILDD+ +L AE   NLF V ++    T E   R
Sbjct: 1013 FKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVSRDLPENTKEPSFR 1069



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 32/180 (17%)

Query: 937  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGV 994
            + NS G + E + RL     +H G+FVN F  G+LV++  +     +  P  ++GTVNG 
Sbjct: 1154 KPNSSGVSGEMQ-RLVDCAYFHTGDFVNVFVRGNLVLQNAEERWTAVGYPGHLYGTVNGG 1212

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            +G++  +    + FL++++  L  ++  VGG +H+ WR+F  +++   A NF+DGDLIE+
Sbjct: 1213 LGLLVQVSPVLFAFLKEVEFRLSNLVVPVGGFSHDTWRAFKADREIKMAHNFVDGDLIET 1272

Query: 1055 FLDLSRTRMDEISK--------------------------TMNVSVEELCKRVEELTRLH 1088
              DLS   MD+ +K                          T   +VE+L K VEE++RLH
Sbjct: 1273 VTDLS---MDDKAKLVKGLRIPVNMNEFGTAGSTCTTDPETRECTVEDLVKVVEEMSRLH 1329


>gi|358338734|dbj|GAA31211.2| DNA damage-binding protein 1, partial [Clonorchis sinensis]
          Length = 1515

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 351/1067 (32%), Positives = 561/1067 (52%), Gaps = 151/1067 (14%)

Query: 23   NFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIAT 82
            +FT P +LNL+I K T IE+  +T +GL+ + DVPI  +I    LFR      D LFI T
Sbjct: 1    HFTGPDDLNLLICKNTYIEVFEVTSEGLRLIRDVPINAKIVAACLFRRKERQTDSLFILT 60

Query: 83   ERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFK 140
             +  F ++      +  + +T   G V D   R  D G   ++DP    + + LY GL +
Sbjct: 61   HKAGFALIDCARKGDDVQFVTVVSGSVEDCGARLIDQGFDVLVDPGANCVVVRLYHGLLR 120

Query: 141  VIPFDNKGQ------------LKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDAR 188
            +IP +  G+                +N+R+EE  ++D+ FL+G   PT  ++Y+D     
Sbjct: 121  IIPLNGIGEKLTTDSLEVNQYAANTYNVRIEEGNIVDMAFLHGYTLPTFAMIYEDEL-VL 179

Query: 189  HVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA---F 245
            H+KTYE++ ++        + ++++  + LLIPVP P  GV+++G+  I Y + +     
Sbjct: 180  HMKTYEISGREPALRNVQLTLDSIEPDSKLLIPVPKPFGGVILVGDNIIYYHTKDGPHIS 239

Query: 246  KAIP-IRPSITKAYGRVDADGSRYLLGDHAG---LLHLLVITH----------------E 285
            + IP  + S    Y  VDA   RYLLGD AG   ++HLL   H                 
Sbjct: 240  QYIPQAKASQVLCYAAVDA--QRYLLGDMAGRLYMVHLLAEDHTPSGNGLLGSTSSAAVP 297

Query: 286  KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA-KGSYVEVLER 344
              ++  ++IELLGET+   +I+Y+DN VV+IG + GDSQLI+LN  PD  + SY+ VLE 
Sbjct: 298  SARIGSIRIELLGETATPESIAYVDNGVVFIGCTLGDSQLIRLNPDPDPERNSYITVLEN 357

Query: 345  YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWS 404
            Y N+GPIVD  +V LE +GQ Q++TCSGAYK+G+LRI+RNGIGI+E A+++   IKG W 
Sbjct: 358  YTNIGPIVD--MVLLESKGQNQLITCSGAYKEGTLRIIRNGIGIHEHATIDQDLIKGAWC 415

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH-----DAI-- 457
                +D  +D  +VVS + +T++L +  +D++    +EGF +  QT++C      DA   
Sbjct: 416  FPLESDR-YDDSIVVSMVGQTQLLRLT-DDDITALHLEGFKTDEQTVYCATLSPMDACTS 473

Query: 458  --------------YNQLVQVTSGSVRLVSS---TSRELRNEWKSPPGYSVNVATANASQ 500
                          ++ L+Q T+  +RL+            EW+SP G  ++  +++ + 
Sbjct: 474  DNPESSSRSYSVFQHSLLMQATTSGIRLIGIHHLNGSGCLAEWRSPSGRGISCLSSHGAL 533

Query: 501  VLLATGGGHLVYLEIGDG---ILTEVKHAQLEYEISCLDINP---------------IGE 542
            +++A+G    V   +G        +  H  +  E++C+D+ P               I E
Sbjct: 534  IVVASGPELYVLRVVGPANQPSFEQTAHRTMSNEVACIDLTPFDHKRAAYAASQTSTIDE 593

Query: 543  NPSYS--QIAAVGMWTDISVRIFSLPDLNLITKEHL-------GGEIIPRSVLLCAFEGI 593
               Y+  Q+ AVG+W    + +  LP+L L+ +E L       G  ++PRSVLL   E +
Sbjct: 594  PVDYTVPQLVAVGLWLGYGLALLRLPNLELVHEEPLPETTASTGTALLPRSVLLAQLEDM 653

Query: 594  SYLLCALGDGHLLNFLLNMKTGE--LTDRKKVSLGTQP-ITLRTFSSKNTTHVFAASDRP 650
            +YL  A+GDG L  + +        L D K+V+ GT P + L+ + S+   +VF  S+ P
Sbjct: 654  AYLFAAMGDGTLYFYTVCPSADGIVLRDAKRVNAGTGPSMFLKQWRSQCKVNVFVCSNHP 713

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
             VIYS   KL+++N+N+KEV+ M P N A + D +A+     L IG++D+IQKLH+R++P
Sbjct: 714  CVIYSIKNKLIFANLNMKEVNFMAPLNGAFYRDCIALVTPTALVIGSVDEIQKLHVRTVP 773

Query: 711  LGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR----------------------- 747
            L E P+R+  Q+++ +  + + + +   E S    VR                       
Sbjct: 774  LEETPKRLALQDETGSLGVITYRQEVFQEGSGFKPVRSSISLSQKVPKSTSRLPKTAPSS 833

Query: 748  -----------------LLDDQTFEFI---STYPLDTF-EYGCSILSCSFSDDS-NVYYC 785
                             + +  T E +   S Y   T  E   SI S   +D S ++ Y 
Sbjct: 834  VSATERKFREVEVSSLLIFNKSTMELMFAHSFYFSQTLVEVAVSIASIEPTDGSKSMLYA 893

Query: 786  VGTAYVLPEENEPTKGRILVF--IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            VGTA+++ EE EP+KGRI +F    E  +L+ +   +  GAVY L  FNG+LLAAIN  +
Sbjct: 894  VGTAFLVEEEVEPSKGRIHLFHWDPETARLETVLVHDVNGAVYRLLDFNGRLLAAINSSV 953

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
            +L+   +++D    L+  C  + +I+AL+++ +GDF++VGDLM+S++LL+Y+      E 
Sbjct: 954  RLFD--IKEDS---LRLACSFNENIIALFLRRKGDFVLVGDLMRSLTLLLYRPNVNNFEA 1008

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 950
              R  N  W + +EILDD+ +L AE   +LF V ++S   T E   R
Sbjct: 1009 IGRHRNPRWTTCIEILDDEHFLAAEVENSLFVVSRDSPENTQEPTVR 1055



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 947  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHE 1004
            E  RL      H G+F+N F  G+LVM+  +     I  P+ ++GTV+G IG+I  +   
Sbjct: 1149 EVQRLADCAYIHTGDFINVFVRGNLVMQNNEERWQAIGHPSHLYGTVSGSIGLIIQVSPV 1208

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
             + FL+++++ L K++  VGG  H+ WR+F  E+    A NF+DGDLIE+ LDLS     
Sbjct: 1209 LFAFLKEIESRLAKLVNPVGGFAHDMWRAFKAERIVRMAHNFVDGDLIETLLDLSSEDRA 1268

Query: 1065 EISKTMNVSV 1074
            ++ K + + V
Sbjct: 1269 KLVKGLRIPV 1278


>gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
          Length = 270

 Score =  528 bits (1359), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/270 (92%), Positives = 264/270 (97%)

Query: 819  KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 878
            KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD
Sbjct: 1    KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 60

Query: 879  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 938
            FIVVGDLMKSISLL+YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL TV+K
Sbjct: 61   FIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKK 120

Query: 939  NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
            NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVI
Sbjct: 121  NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVI 180

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
            ASLP EQY FLEKLQ++LRKVIKGVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDL
Sbjct: 181  ASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDL 240

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            SR +M++ISK+MNV VEELCKRVEELTRLH
Sbjct: 241  SRNKMEDISKSMNVQVEELCKRVEELTRLH 270


>gi|407923753|gb|EKG16818.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
            phaseolina MS6]
          Length = 1129

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 360/1147 (31%), Positives = 601/1147 (52%), Gaps = 84/1147 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++V H+   N     E +L++AK  R+E+++ +  GL       +YG++  L
Sbjct: 3    YIAPIHRPSSVRHAIKLNLLDSDEESLVVAKSNRLELYVQSVDGLILHHAQAVYGKVTML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
               RP  E  + LF+ T+RY +  + W  E  +L T +   D++D+  R    G   ++D
Sbjct: 63   NRLRPMNEPTEHLFVGTDRYYYFTMAWSPEEKQLKTVKTYQDLADKAARDAQTGDRSLLD 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLK---------EAFNIRLEELQVLDIKFLYGCA-- 173
            P  R + L LY+G+  V+P   KG+ K         E    R+EE+ V    FL+  +  
Sbjct: 123  PTGRFMTLELYEGIVTVVPLTEKGKRKGDPEVSALGEPVPSRIEEMFVRSSAFLHRKSPE 182

Query: 174  --KPTIVVLYQDNKDAR-----------HVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
              KP + +LY++++D++              T E ++   + VEG   +  LD GA  LI
Sbjct: 183  SEKPLVALLYEEDEDSKIRLRLRQLAFQTAGTEEQSVAALEPVEG--LKEELDLGASHLI 240

Query: 221  PVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYLLGDHAGL 276
            PVP P  GVL++GE  I Y + +  KA+  +P    +I  A+ ++D    R+LL D  G 
Sbjct: 241  PVPGPCYGVLVLGETCITYFN-DYTKALVKKPLQDSTIFVAWEQID--NQRFLLADDFGG 297

Query: 277  LHLLVITHEKEK--VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA 334
            L+L ++  +     V G +++ +GETS AS + YLD   V++GS  GDSQ+I++      
Sbjct: 298  LYLFMLLLDDNSGVVEGWRLDKIGETSRASVLVYLDAGHVFVGSHEGDSQVIRIT----- 352

Query: 335  KGSYVEVLERYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVR 383
            +GS +EV++ + N+ PI+DF ++D+  R G+GQ          +VT SGA+KDGSLR VR
Sbjct: 353  EGS-IEVVQTFHNIAPILDFTIMDMGNRSGEGQSNEYSSGQARIVTGSGAFKDGSLRSVR 411

Query: 384  NGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-I 441
            +G+G+ +Q ++ +L  I  +++  S+    +D  L+VS ++E+RI  ++ + EL+E E  
Sbjct: 412  SGVGLEDQGAIGDLGSISNIFAFSSTASGEYDDTLLVSLVNESRIFCVDADGELDERESF 471

Query: 442  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 501
            +G      TL   +    +L+QVT  +VR++   +  + +EW +P G  +    +N   +
Sbjct: 472  KGLQLDESTLMTKNVPNYRLLQVTQFAVRIMDLENDMVVSEWHAPEGQVITDVDSNDRFI 531

Query: 502  LLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 560
            +L+ GG   + L I D I     K    + +ISC+ +    +N     I  VG W + +V
Sbjct: 532  ILSIGGVRAIILSIADTIHAVAEKDFGADSQISCVAMPQAADN-----ICFVGFWQNCTV 586

Query: 561  RIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGE 616
             I  L  L  I    L   G  +PRS+LL          L  A  DG+++ F ++  T  
Sbjct: 587  AILGLDGLQTIQTISLSEDGSSVPRSLLLTQIFANQPPTLFIATADGYVVTFSMDPSTFA 646

Query: 617  LTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
            L+ RK   LGTQ    R     N  + VFA  + P++IY S  +L++S V  ++ + +CP
Sbjct: 647  LSGRKSTVLGTQQANFRALPRGNGLYNVFATCEHPSLIYGSEGRLVFSAVTAEKATCVCP 706

Query: 676  FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN- 734
            FN+ A+P S+AIA  GEL +  +D+ ++ H++++ + E  RRI +  Q + F + ++K  
Sbjct: 707  FNAEAYPRSIAIAASGELHLAVVDEERRTHVQTLHVNETVRRIAYSPQLKAFGLGTIKRV 766

Query: 735  -QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD---DSNVYYCVGTAY 790
             +   E  + HF RL D+  F+ +  + ++ +E     +     D   ++   + VGT++
Sbjct: 767  LRDREEVVQGHF-RLADEVIFKELDNFEMNEYEIVECAIRAELDDGDGETAERFIVGTSH 825

Query: 791  VLPEENE-PTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
            ++ EE +  T+GRILVF + ED +L++IAE  TKGA   L   + K++A + + + +Y +
Sbjct: 826  LVEEEEQGSTRGRILVFEVTEDRRLKVIAEISTKGACRCLAMVDNKIVAGLIKTVVIYSF 885

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEER 904
                  T  L  +         + +   G+ I V DL+KS+S+L YK   G     ++E 
Sbjct: 886  EYSTPSTPFLVKKASFRTSTAPIDITVTGNQIAVADLIKSVSVLEYKPGAGDQSDELKEV 945

Query: 905  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
            AR    +W  A+  +D++ YL A+   NL  + ++  G T+E+R RL + G+  LGE VN
Sbjct: 946  ARHVQVSWSMALAEVDENTYLQADAEGNLILLERDVSGVTEEDRKRLMLRGDMLLGEQVN 1005

Query: 965  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 1024
            R R   +      SD   IP   F TV G I + A +   +   L +LQ+ L   ++  G
Sbjct: 1006 RIRRIDMATV---SDAPVIPRAFFATVEGSIYLFALIAPAKVDLLIRLQSQLADFVRSPG 1062

Query: 1025 GLNHEQWRSFNNEKKTVDAKN-FLDGDLIESFLDLSRTRMDEISKTM--NVSVEELCKRV 1081
                 ++R+F N+ +  D  N F+DGDLIE FLDL     +E+ K +  ++ VEE+   V
Sbjct: 1063 HYPFLRYRAFRNQVREEDEPNRFVDGDLIERFLDLKPREQEEVVKGVYADLDVEEVRSLV 1122

Query: 1082 EELTRLH 1088
            E L RLH
Sbjct: 1123 ETLRRLH 1129


>gi|452003044|gb|EMD95501.1| hypothetical protein COCHEDRAFT_1165632 [Cochliobolus heterostrophus
            C5]
          Length = 1116

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 340/1130 (30%), Positives = 585/1130 (51%), Gaps = 63/1130 (5%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++V H+   NF +P++  L++AK  R+E +     GL       IYG++  L
Sbjct: 3    YIAPIHRPSSVRHALKLNFLAPEDDCLVVAKSNRLEFYTHEADGLILRHSKAIYGKVTML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  RP     D LFI T+R+ +  L W+AE  +L T ++   V+D   R +  G+   ID
Sbjct: 63   QKLRPALSPTDHLFIGTDRFMYFTLSWNAEKKQLQTEKSFASVADNAARESQTGERCHID 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ----------LKEAFNIRLEELQVLDIKFLYGCA- 173
            P  R + + +Y+G+  VIP   +G+          L +   +RL E+ V    FL   + 
Sbjct: 123  PTGRFMTIEVYEGILTVIPLVQRGKKRKQEADIAHLGDPQPVRLPEMFVRSSAFLRPRST 182

Query: 174  --KPTIVVLYQDNKDARHVKTYEVAL--KDKDFVEGPWSQNNLDNGADLLIPVPPPLCGV 229
              KP + +LY+D      ++  E+     + D  EG   ++ L+ G+  LIP+  P  G+
Sbjct: 183  DDKPKMALLYEDTHAQVKLRLRELTYVGDEVDLQEGEACKSELELGSSHLIPLEEPSHGL 242

Query: 230  LIIGEETIVYC--SANAFKAIPI-RPSITKAYGRVDADGSRYLLGDHAGLLHL-LVITHE 285
            ++IGE +I Y    +   +  P+   +I  A+ R+DA   R++L D  G L++ +++ + 
Sbjct: 243  VVIGETSIGYFDDESGDLQTEPLDEATIFVAWERIDA--QRFVLADDYGRLYMFMLVLNA 300

Query: 286  KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERY 345
            + +V   K++++G+TS AST+ YLD   V++GS  GDSQ+I++     A+ S +E+++ +
Sbjct: 301  QGRVQSWKLDVIGQTSRASTLVYLDAGYVFVGSHQGDSQVIRI-----AEKS-MEIVQTF 354

Query: 346  VNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIGINEQASV 394
             N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G+ +   +
Sbjct: 355  SNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVL 414

Query: 395  -ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFCSQTQTLF 452
             E++ I  ++ LRS+    +   L+VSF+ E+R+   + + E+EE  E         TL 
Sbjct: 415  GEMEHISELFCLRSAPSAQYTDTLLVSFVGESRVFRFDSQGEVEEVDEFVSLALDETTLA 474

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 512
              +    ++VQVT+G  R+       + +EW    G ++  A+ NA+ VL++ GG  +V 
Sbjct: 475  AANIPQGRIVQVTNGRARICDLDGGMMTSEWVPADGKTITAASVNATHVLVSLGGVTIVS 534

Query: 513  LEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 571
            L + DG+ + + K    E +++C+ + P G     S    VG W +  + I SL  L  +
Sbjct: 535  LSMADGLQVVKEKTFGAESQVACVTV-PSGT----SSTCFVGFWNNSQLAICSLDTLEAV 589

Query: 572  TKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                +  + +PRS+LL     +    L  AL DG+++ +  +    EL+ RK + LGT+ 
Sbjct: 590  KTVQISDDSVPRSLLLTQIFPDQPPSLFVALADGNVVTYTFDPSNHELSGRKSIVLGTRE 649

Query: 630  ITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
             T R     +   +VFA  + P++IY+S  +L+YS V  ++ + +CPF+S A+P S+AIA
Sbjct: 650  ATFRALPRGDGLFNVFATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAYPSSVAIA 709

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN-QSCAEESEMHFVR 747
               +L I  +D  +  H++++ + E  RRI +    + F + ++K      EE  +   +
Sbjct: 710  TSQDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKHGEEIMLSHFK 769

Query: 748  LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN---VYYCVGTAYVLPEENEPTKGRIL 804
            L+D+  F+ + TY L+  E    ++ C   D S      + VGTAYV  +     +GRI+
Sbjct: 770  LVDEIQFKELDTYALNEEELVECVMRCELPDGSGGLAERFVVGTAYVDDQNTTSERGRII 829

Query: 805  VFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
            V  V   + L+L+ E   KG    L    GK++AA+ + I +Y +  R   T +L     
Sbjct: 830  VLEVTPERILKLVTEIAVKGGCRCLAICQGKIVAALIKTIVVYDFEYRAPSTPDLVKLAS 889

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNANWMSAVEIL 919
                   + V   G  I + DLMKS+ ++ Y   E  + ++    AR Y   W +AV  +
Sbjct: 890  FRCSTAPIDVTVNGSLIAIADLMKSLVIVEYTKGETGLPDKLVEVARHYQITWATAVAEV 949

Query: 920  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
            D + YL ++   NL  + ++  G TD+++ RL +  E  LGE VNR R    V  L  +D
Sbjct: 950  DTNTYLESDAEGNLVVLYRDPNGVTDDDKRRLNISSEMLLGEMVNRIRR---VDVLTAAD 1006

Query: 980  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-K 1038
               +P    GTV G I +   +  +    L  LQ+NL  ++   G +   ++R+F N  +
Sbjct: 1007 AVIVPKAFVGTVEGSIYLFGLISPDYQNLLMTLQSNLGSLVAAPGDMQFAKFRAFKNSVR 1066

Query: 1039 KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +  +   F+DG+L+E FLD+S     +    + V +EE+   +E L RLH
Sbjct: 1067 EEEEPMRFVDGELVERFLDVSEEVQHKAIDGLGVELEEVKGLIEALRRLH 1116


>gi|330935579|ref|XP_003305038.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
 gi|311318228|gb|EFQ86975.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
          Length = 1115

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 353/1135 (31%), Positives = 592/1135 (52%), Gaps = 74/1135 (6%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++V H+   NF SP E  L++AK  R+E ++    GL       IYG++  L
Sbjct: 3    YIAPIHRPSSVRHALKLNFLSPDEDCLVVAKSNRLEFYVQESDGLALKHSKAIYGKVTML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  RP   + D LF+ T+R+ +  L WDAE  +L T ++   V+D   R +  G+   ID
Sbjct: 63   QKLRPALSSTDHLFVGTDRFMYFTLSWDAEQGQLQTEKSFASVADNAARESQTGERCHID 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ----------LKEAFNIRLEELQVLDIKFLYGCA- 173
            P  R + + +Y+G+  VIP   +G+          L E   +RL E+ +    FL   + 
Sbjct: 123  PLGRFMTVEVYEGIITVIPLVQRGKKRKQEADIAHLGEPQPVRLPEMFIRSSAFLRPRSP 182

Query: 174  --KPTIVVLYQDNKDARHVKTYEV--ALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGV 229
              KP + +LY+D      +K  E+  A  + D  EG   ++ L+ G+  LIPV  P  G+
Sbjct: 183  DEKPKMALLYEDTHSQVKLKLRELTYAGDEVDLQEGETCKSELELGSSHLIPVEKPSHGL 242

Query: 230  LIIGEETIVYC--SANAFKAIPI-RPSITKAYGRVDADGSRYLLGDHAGLLHL-LVITHE 285
            ++IGE +I Y    +    + P+   +I  A+ R+DA   R++L D  G L++ +++   
Sbjct: 243  VVIGETSIGYYDDESGEIHSEPLDEATIFVAWERIDA--QRFVLADDYGRLYMFMLVLSA 300

Query: 286  KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERY 345
            + KV   K++++G+TS AST+ YLD   VY+GS  GDSQ+IK+     A+ S +E+++ +
Sbjct: 301  QGKVQSWKLDIIGQTSRASTLVYLDAGYVYVGSHQGDSQVIKI-----AEKS-MEIVQTF 354

Query: 346  VNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
             N+ PI+DF ++D+  +           GQ ++VT SGAY+DGSLR VR+G+G+ +   +
Sbjct: 355  SNIAPILDFTIMDMGNRSAEGQTNEYSSGQARIVTASGAYQDGSLRSVRSGVGLEDLGVL 414

Query: 395  -ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFCSQTQTLF 452
             E++ I  ++SL+S+    +   L+VSF++E+RI   + + E+EE  E         TL 
Sbjct: 415  SEMEHISDLFSLKSTASAQYADTLLVSFVNESRIFRFDPQGEVEEVDEFASLALDETTLA 474

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 512
              +    ++VQVT+G  R+       + +EW    G ++  A+ N S VL++ GG  +V 
Sbjct: 475  AANISQGRIVQVTNGRARICDLDGGMIISEWLPMGGPTITAASINESHVLVSLGGVTVVS 534

Query: 513  LEIGDGI-LTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVRIFSLPDLNL 570
            + + DG+ + + K    E +++C+ +      PS  S I  VG W +  + I SL  L  
Sbjct: 535  ISMADGLQVVKEKTFNAESQVACIAL------PSDSSSICFVGFWNNSGLAICSLDTLEP 588

Query: 571  ITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
            +    +  + +PRS+LL          L  AL DG+++ +  +  T EL+ RK + LGT+
Sbjct: 589  VKTVQISDDSVPRSLLLTQIFPAQPPSLFVALADGNVVTYAFDPSTHELSGRKSIVLGTR 648

Query: 629  PITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 687
              T R     N   +VFA  + P++IYSS  +L+YS V  ++ + +CPF+S A+P S+AI
Sbjct: 649  EATFRALPRGNGLFNVFATCEHPSLIYSSEGRLVYSAVTAEKATTVCPFDSEAYPGSVAI 708

Query: 688  AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM--HF 745
            A   +L I  +D  +  H++++ + E  RRI +    + F + ++K     +E  M  HF
Sbjct: 709  ATSEDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKNDEELMASHF 768

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLPEENEPTKGR 802
             +L+D+  F+ + +Y L+  E    ++ C   D S      + +GTAY+  +     +GR
Sbjct: 769  -KLVDEIQFKELDSYALNEEELIECVMRCELPDGSGGLAECFVIGTAYLDDQNTTSERGR 827

Query: 803  ILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            IL+  V   + L+L+ E   KG    L    GK++AA+ + I +Y  +     T  L   
Sbjct: 828  ILILEVTPERILKLVTEIAVKGGCRCLATCEGKIVAALIKTIVIYD-VEYPTQTPFLTKL 886

Query: 862  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNANWMSAVE 917
                     + +   G  I + DLMKS+ ++ Y   E  + ++    AR Y   W +AV 
Sbjct: 887  ATFRCSTAPIDITVNGSKIAIADLMKSLVVVEYTKGEAGLPDKLVEVARHYQITWATAVA 946

Query: 918  ILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
             +D ++YL ++   NL  + ++  G TD+++ RL V  E  LGE VNR R    +  L  
Sbjct: 947  EVDTNMYLESDAEGNLMVLYRDPNGVTDDDKRRLNVSSEMLLGEMVNRIRR---IDVLTA 1003

Query: 978  SDVGQIPTVIFGTVNGVI---GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            SD   IP    GTV G I   G+I+  P  Q L +  LQ+NL  ++   G ++  ++R+F
Sbjct: 1004 SDAVVIPRAFVGTVEGSIYLFGLIS--PAHQNLLM-TLQSNLGALVPAPGDMDFAKFRAF 1060

Query: 1035 NNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
             N  ++  +   F+DG+ +E FLD S     +  + + V +EE+   VE L RLH
Sbjct: 1061 KNGVREEEEPMRFVDGEFVERFLDQSEEVQTKAIEGLGVGLEEVRGLVEGLRRLH 1115


>gi|169611218|ref|XP_001799027.1| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
 gi|160702249|gb|EAT83885.2| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
          Length = 1140

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 342/1104 (30%), Positives = 576/1104 (52%), Gaps = 69/1104 (6%)

Query: 35   AKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDA 94
            +K  R+E +  T  GL       IYG++  L+  RP     D LF+ T+R+ +  L W+A
Sbjct: 56   SKANRLEFYTQTADGLALQHQKSIYGKVTMLQKLRPALSPTDHLFVGTDRFMYFTLSWNA 115

Query: 95   ESSELIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQ---- 149
            E  +L T ++   V+D   R +  G+   +DP  R + + +Y+G+  VIP   +G+    
Sbjct: 116  EKKQLQTEKSFDSVADNAARESQTGERCHVDPSGRFMTVEVYEGIITVIPLVQRGKKRKQ 175

Query: 150  ------LKEAFNIRLEELQVLDIKFLYGCA---KPTIVVLYQDNKDARHVKTYEVALKDK 200
                  L E   +RL E+ V    FL   A   KP I +L++D      ++  E+     
Sbjct: 176  EPDIAHLGEPQPVRLPEMFVRSSAFLRPKAFDDKPKIALLFEDTHSQVKLRLREILFAGG 235

Query: 201  DFVE---GPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPI-RPSI 254
            D VE   G   +  L+ GA  LIP+  P  G+++IGE +I Y    +N  +  P+   +I
Sbjct: 236  DSVELEDGEACRAELELGASHLIPIEAPSHGLIVIGETSIAYYDEESNDLQTEPLDEATI 295

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHL-LVITHEKEKVTGLKIELLGETSIASTISYLDNAV 313
              A+ R+DA   R++L D  G L+L ++I  EK+KV   K++++G+TS AS + YLD   
Sbjct: 296  FVAWERIDA--QRFVLADDYGRLYLFMLILDEKKKVQSWKLDIIGQTSRASVLVYLDAGY 353

Query: 314  VYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-ERQGQGQ------ 366
            V++GS  GDSQ+I++  Q       +E+++ + N+ P++DF ++D+  R G+GQ      
Sbjct: 354  VFVGSHQGDSQVIRITEQS------MEIVQTFANIAPVLDFTIMDMGNRSGEGQTNEYSS 407

Query: 367  ----VVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSF 421
                +VT SGAY+DGSLR VR+G+G+ +   + E++ I  ++ L+S+    +   L+V+F
Sbjct: 408  GQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEMEHISDLFGLKSNASAEYADTLLVTF 467

Query: 422  ISETRILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            ++ETRI   + + E+EE  E         TL   +    ++VQVT G VR+       + 
Sbjct: 468  VNETRIFRFDPQGEVEEVDEFASVALDETTLAAANISQGRVVQVTGGRVRVSDLDGGMIT 527

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINP 539
            +EW  P G ++  A+ N S VLL+ GG  ++ L + G  +LTE K   +E +++C+ +  
Sbjct: 528  SEWVPPSGETITAASVNDSHVLLSLGGVSVITLNMDGLKVLTEKKFG-VESQVACIAL-- 584

Query: 540  IGENPSYSQ-IAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAF--EGISYL 596
                PS S  +  +G W +  + I SL  L  +    +  + +PRS+LL     +    L
Sbjct: 585  ----PSTSSSMCFIGFWKNSQLAICSLDTLEAVKTVQVSEDSVPRSLLLTQIFPDQPPTL 640

Query: 597  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYS 655
              A+ DG+++ +  +   GEL+ RK + LGT+  T R     N   +VFA  + P++IY+
Sbjct: 641  FAAMADGNVVTYSFDTSNGELSGRKSIVLGTREATFRALPRGNGLFNVFATCEHPSLIYA 700

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 715
            S  +L+YS V  +  + +CPF+S A+P S+AIA   +L I  +D  +  H++++ + E  
Sbjct: 701  SEGRLVYSAVTAENATTVCPFDSEAYPGSVAIATSDDLRIALVDTERTTHVQTLKVDETV 760

Query: 716  RRICHQEQSRTFAICSLKNQSCAEESEM--HFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
            RRI +    + F + ++K    A E  M  HF +L+D+  F+ + TY L+  E    ++ 
Sbjct: 761  RRIAYSPGLKAFGLGTVKRILKAGEEIMLSHF-KLVDEIQFKELDTYALNEEELVECVMR 819

Query: 774  CSFSDDSN---VYYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLN 829
            C  +D S      + +GTAY+  + +   +GRIL+  +  +  L+L+ E   KG    L 
Sbjct: 820  CDLADGSGGTAERFVIGTAYLDDQNSTVERGRILILEVTPERVLKLVTEIAVKGGCRCLA 879

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 889
               GK++AA+ + I +Y    R     +L            + +   G  I + DLMKS+
Sbjct: 880  MCEGKIVAALIKTIVVYDIEYRTQSKPDLVKAATFRCSTAPIDITVNGTQIAIADLMKSM 939

Query: 890  SLLIYKHEEGAIEER----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 945
             ++ Y+  E  + ++    AR +   W +AV  +D++ YL ++   NL  + ++ +G TD
Sbjct: 940  VVVEYQRGETGLPDKLVEVARHFQVTWATAVAEVDENTYLESDAEGNLLVLYRDPKGVTD 999

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 1005
            +++ RL V  E  LGE VNR R    V   PD+ V  +P    GTV G I + A +    
Sbjct: 1000 DDKRRLNVSSEMLLGEMVNRIRRID-VATAPDAVV--VPRAFMGTVEGSIYLFALISQNY 1056

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN-FLDGDLIESFLDLSRTRMD 1064
               L  LQ+NL  ++   G ++  ++R+F N+ +T +  N F+DG+LIE FLD       
Sbjct: 1057 LDLLITLQSNLGNLVVSPGNMDFAKFRAFKNQVRTEEEPNRFVDGELIERFLDCEEDVQR 1116

Query: 1065 EISKTMNVSVEELCKRVEELTRLH 1088
            +  + + V +E++   VE L RLH
Sbjct: 1117 KAIEGLGVELEDIRSLVEGLRRLH 1140


>gi|451856466|gb|EMD69757.1| hypothetical protein COCSADRAFT_32431 [Cochliobolus sativus ND90Pr]
          Length = 1116

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 338/1130 (29%), Positives = 586/1130 (51%), Gaps = 63/1130 (5%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++V H+   NF +P++  L++AK  R+E +     GL       IYG++  L
Sbjct: 3    YIAPIHRPSSVRHALKLNFLAPEDDCLVVAKSNRLEFYTHEADGLVLKHSKAIYGKVTML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  RP     D LF+ T+R+ +  L W+ E  +L T ++   V+D   R +  G+   ID
Sbjct: 63   QKLRPALSPTDHLFVGTDRFMYFTLSWNTEKKQLQTEKSFASVADNAARESQTGERCHID 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ----------LKEAFNIRLEELQVLDIKFLYGCA- 173
            P  R + + +Y+G+  VIP   +G+          L +   +RL E+ V    FL   + 
Sbjct: 123  PTGRFMTIEVYEGILTVIPLVQRGKKRKQEADIAHLGDPQPVRLPEMFVRSSAFLRPRST 182

Query: 174  --KPTIVVLYQDNKDARHVKTYEV--ALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGV 229
              KP + +LY+D      ++  E+  A  + D  EG   ++ L+ G+  LIP+  P  G+
Sbjct: 183  DDKPKMALLYEDTHAQVKLRLRELTYAGDEVDLQEGETCKSELELGSSHLIPLEEPSHGL 242

Query: 230  LIIGEETIVYC--SANAFKAIPI-RPSITKAYGRVDADGSRYLLGDHAGLLHL-LVITHE 285
            +IIGE +I Y    +   +  P+   +I  A+ R+DA   R++L D  G L++ +++ + 
Sbjct: 243  VIIGETSIGYFDDESGELQTEPLDEATIFVAWERIDA--QRFVLADDYGRLYMFMLVLNA 300

Query: 286  KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERY 345
            + +V   K++++G+TS AST+ YLD   V++GS  GDSQ+I++     A+ S +E+++ +
Sbjct: 301  QGRVQSWKLDVIGQTSRASTLVYLDAGYVFVGSHQGDSQVIRI-----AEKS-MEIVQTF 354

Query: 346  VNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIGINEQASV 394
             N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G+ +   +
Sbjct: 355  SNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVL 414

Query: 395  -ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFCSQTQTLF 452
             E++ I  ++SL+S+    +   L+VSF+ E+R+   + + E+EE  E         TL 
Sbjct: 415  GEMEHISELFSLKSTASAQYIDTLLVSFVDESRVFRFDSQGEVEEVDEFVSLALDETTLA 474

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 512
              +    ++VQVT+G  R+       + +EW    G ++  A+ N + VL++ GG  +V 
Sbjct: 475  AANIPQGRIVQVTNGRARICDLDGGMITSEWVPTDGKTITAASVNETHVLVSLGGVTIVS 534

Query: 513  LEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 571
            L + +G+ + + K    E +++C+ + P G     S    VG W +  + I SL  L  +
Sbjct: 535  LSMANGLQVVKEKTFGAESQVACVTL-PSGT----SSTCFVGFWNNSQLAICSLDTLEAV 589

Query: 572  TKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                +  + +PRS+LL     +    L  AL DG+++ +  +    EL+ RK + LGT+ 
Sbjct: 590  KTVQISDDSVPRSLLLTQIFPDQPPSLFVALADGNVVTYTFDQSNHELSGRKSIVLGTRE 649

Query: 630  ITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
             T R     +   +VFA  + P++IY+S  +L+YS V  ++ + +CPF+S A+P S+AIA
Sbjct: 650  ATFRALPRGDGLFNVFATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAYPGSVAIA 709

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN-QSCAEESEMHFVR 747
               +L I  +D  +  H++++ + E  RRI +    + F + ++K      EE  +   +
Sbjct: 710  TSQDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKHGEEIMLSHFK 769

Query: 748  LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN---VYYCVGTAYVLPEENEPTKGRIL 804
            L+D+  F+ + TY L+  E    ++ C   D S      + VGTAYV  +     +GRI+
Sbjct: 770  LVDEIQFKELDTYALNEEELVECVMRCELPDGSGGLAERFVVGTAYVDDQNTTSERGRII 829

Query: 805  VFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
            V  V   + L+L+ E   KG    L    GK++AA+ + I +Y +  R   T +L     
Sbjct: 830  VLEVTPERILKLVTEVAVKGGCRCLAICQGKIVAALIKTIVVYDFEYRTPSTPDLVKLAS 889

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNANWMSAVEIL 919
                   + +   G  I + DLMKS+ ++ Y   E  + ++    AR Y   W +AV  +
Sbjct: 890  FRCSTAPIDLTVNGSLIAIADLMKSLVVVEYTKGETGLPDKLVEVARHYQITWATAVAEV 949

Query: 920  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
            D ++YL ++   NL  + ++  G TDE++ RL +  E  LGE VNR R    +  L  +D
Sbjct: 950  DTNMYLESDAEGNLVVLYRDPNGVTDEDKRRLNISSEMLLGEMVNRIRR---IDVLTAAD 1006

Query: 980  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-K 1038
               +P    GTV G I +   +  +    L  LQ+NL  ++   G +   ++R+F N  +
Sbjct: 1007 AVIVPKAFVGTVEGSIYLFGLISPDYQNLLMTLQSNLGSLVAAPGDMQFAKFRAFKNSVR 1066

Query: 1039 KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +  +   F+DG+LIE FLD+S     +    + V +EE+   +E L RLH
Sbjct: 1067 EEEEPMRFVDGELIERFLDVSEEVQSKAIDGLGVELEEVKGLIEALRRLH 1116


>gi|189205943|ref|XP_001939306.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975399|gb|EDU42025.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1115

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 352/1135 (31%), Positives = 595/1135 (52%), Gaps = 74/1135 (6%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++V H+   +F SP E  L++AK  R+E +     GL       IYG++  L
Sbjct: 3    YIAPIHRPSSVRHALKLSFLSPDEDCLVVAKSNRLEFYTQESDGLALKHSKAIYGKVTML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  RP   + D LF+ T+R+ +  L WDAE  +L T ++   V+D   R +  G+   ID
Sbjct: 63   QKLRPALSSTDHLFVGTDRFMYFTLSWDAEKRQLQTEKSFASVADNAARESQTGERCHID 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ----------LKEAFNIRLEELQVLDIKFLYGCA- 173
            P  R + + +Y+G+  VIP   +G+          L E   +RL E+ +    FL   + 
Sbjct: 123  PSGRFMTVEVYEGIITVIPLVQRGKKRKQEADIAHLGEPQPVRLPEMFIRSSAFLRPRSP 182

Query: 174  --KPTIVVLYQDNKDARHVKTYEV--ALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGV 229
              KP + +LY+D      +K  E+  A  + D  EG   +++L+ G+  LIPV  P  G+
Sbjct: 183  DEKPKMALLYEDTHSQVKLKLRELTYAGDEVDLQEGEICESDLELGSSHLIPVEKPSHGL 242

Query: 230  LIIGEETIVYC--SANAFKAIPI-RPSITKAYGRVDADGSRYLLGDHAGLLHL-LVITHE 285
            ++IGE +I Y    +    + P+   +I  A+ R+DA   R++L D  G L++ +++   
Sbjct: 243  VVIGETSIGYYDDESGEIHSEPLDEATIFVAWERIDA--QRFVLADDYGRLYMFMLVLSA 300

Query: 286  KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERY 345
            + KV   K++++G+TS AST+ YLD   VY+GS  GDSQ+IK+     A+ S +E+++ +
Sbjct: 301  QGKVQSWKLDIIGQTSRASTLVYLDAGYVYVGSHQGDSQVIKI-----AEKS-MEIVQTF 354

Query: 346  VNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIGINEQASV 394
             N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G+ +   +
Sbjct: 355  SNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTASGAYQDGSLRSVRSGVGLEDLGVL 414

Query: 395  -ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFCSQTQTLF 452
             E++ I  ++SL+S+    +   L+VSF++E+RI   + + E+EE  E         TL 
Sbjct: 415  GEMEHISDLFSLKSTASAQYADTLLVSFVNESRIFRFDPQGEVEEVDEFASLALDETTLA 474

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 512
              +    +++QVT+G  R+       + +EW    G ++  A+ N S VL++ GG  +V 
Sbjct: 475  AANISQGRIIQVTNGRARICDLDGGMITSEWLPMGGPTITAASINESHVLVSLGGVTVVS 534

Query: 513  LEIGDGI-LTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVRIFSLPDLNL 570
            + + +G+ + + K    E +++C+ +      PS  S I  VG W +  + I SL  L  
Sbjct: 535  ISMANGLQVVKEKTFGAESQVACIAL------PSDSSSICFVGFWNNSGLAICSLDTLEP 588

Query: 571  ITKEHLGGEIIPRSVLLCA-FEG-ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
            +    +  + +PRS+LL   F G    L  AL DG+++ +  +  T EL+ RK + LGT+
Sbjct: 589  VKTVQISDDSVPRSLLLTQIFPGQPPSLFVALADGNVVTYAFDPSTHELSGRKSIVLGTR 648

Query: 629  PITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 687
              T R     +   +VFA  + P++IYSS  +L+YS V  ++ + +CPF+S A+P S+AI
Sbjct: 649  EATFRALPRGDGLFNVFATCEHPSLIYSSEGRLVYSAVTAEKATTVCPFDSEAYPGSVAI 708

Query: 688  AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN--QSCAEESEMHF 745
            A   +L I  +D  +  H++++ + E  RRI +    + F + ++K   ++  E    HF
Sbjct: 709  ATPEDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKNGEEVMASHF 768

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN---VYYCVGTAYVLPEENEPTKGR 802
             +L+D+  F+ + +Y L+  E    ++ C   D S      + +GTAY+  +     +GR
Sbjct: 769  -KLVDEIQFKELDSYALNEEELIECVMRCELPDGSGGVAERFVIGTAYLDDQSTTSERGR 827

Query: 803  ILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            IL+  V   + L+L+ E   KG    L    GK++AA+ + I +Y  +     T  L   
Sbjct: 828  ILILEVTPERILKLVMEIAVKGGCRCLATCEGKIVAALIKTIVIYD-VEYPTQTPFLTKL 886

Query: 862  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNANWMSAVE 917
                     + +   G  IV+ DLMKS+ ++ Y   E  + ++    AR Y   W +AV 
Sbjct: 887  ATFRCSTAPIDITVNGPKIVIADLMKSLVVVEYTKGEAGLPDKLVEVARHYQITWATAVA 946

Query: 918  ILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
             +D ++YL ++   NL  + ++  G TD+++ RL V  E  LGE VNR R    +  L  
Sbjct: 947  EVDTNMYLESDAEGNLMVLYRDPNGVTDDDKRRLNVSSEMLLGEMVNRIRR---IDVLTA 1003

Query: 978  SDVGQIPTVIFGTVNGVI---GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            SD   IP    GTV G I   G+I+  P  Q L +  LQ+NL  +I   G ++  ++R+F
Sbjct: 1004 SDAVVIPRAFVGTVEGSIYLFGLIS--PAHQNLLM-TLQSNLGALIPAPGDMDFAKFRAF 1060

Query: 1035 NNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
             N  ++  +   F+DG+ +E FLD       +  + + V +EE+   +E L RLH
Sbjct: 1061 KNGVRQEEEPMRFVDGEFVERFLDQGEEVQVKAIEGLGVGLEEVRGLIEGLRRLH 1115


>gi|449295711|gb|EMC91732.1| hypothetical protein BAUCODRAFT_116696 [Baudoinia compniacensis UAMH
            10762]
          Length = 1148

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 345/1166 (29%), Positives = 588/1166 (50%), Gaps = 103/1166 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQP-----MLDVPIYG 60
            Y+   H+P++V H+   +F SP   +LI+AK  R+EI+  +P   QP          +YG
Sbjct: 3    YLAPIHRPSSVRHAINLSFLSPTSSDLIVAKANRLEIY--SPNPHQPDQLSLQYTRSLYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQ 119
            ++  L   RP     D LF+ T+ Y +  L WDA + +L T ++  D++++  R +  G 
Sbjct: 61   KVTLLHKLRPATSQTDHLFVGTDHYHYFTLSWDASTKQLRTEKSYVDIAEKSARDSQTGD 120

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPF-----------DNK-GQLKEAFNIRLEELQVLDIK 167
               IDP  R + L  Y+G+  V+P            DN+ G+L++   +R+ EL V    
Sbjct: 121  RVHIDPTSRFLSLECYEGVINVLPIAHAGKGKRKAADNEIGELQDPIPVRIPELFVRSTC 180

Query: 168  FLYG------CAKPTIVVLYQDNKDARHVKTYEVALKDK----------DFVEGPWSQNN 211
            F++        A P + VL++D+ +   +K  E+               +  +G  +Q  
Sbjct: 181  FVHKRQAGSKLANPELAVLWEDSTNKVRLKVRELEFTPSLRPAEEPPTAELEKGKDAQGE 240

Query: 212  LDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSR 267
            ++ GA  LIP+PPP+ G+L++GE  I Y     ++    +P    +I  A+  VD    R
Sbjct: 241  IELGASHLIPLPPPMYGMLVVGETRIAYVDEWEYRITDTQPLDEATIFVAWCAVDEQ--R 298

Query: 268  YLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
            Y+L D  G L+LL V+ +   +  G ++++LG+TS A+T+ YLD   +++GS  GDSQ+I
Sbjct: 299  YVLADDYGKLYLLFVLQNNTGEYAGHRLDILGQTSRANTLVYLDAGRIFVGSHQGDSQVI 358

Query: 327  KLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYK 375
            +++ Q       +EV++ + N+ PI+DF ++D+  +           GQ ++VT SGAYK
Sbjct: 359  QISEQS------MEVVQTFANIAPILDFTIMDMGNRSSDAPVNEFSSGQARIVTGSGAYK 412

Query: 376  DGSLRIVRNGIGINEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
            DGSLR VR+G+G+ +  S+   G  +  M+SLRSS +  F   LVV F+S TR+   +++
Sbjct: 413  DGSLRSVRSGVGLEDVGSIGEMGAPVSAMFSLRSSPESHFVDTLVVGFVSYTRVFRFDVD 472

Query: 434  DELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
             E+EE + + GF     +L+  +    ++VQVT  +V +  + +R + + W  P G S+ 
Sbjct: 473  GEVEEVDHLGGFELAAASLYAGNTSDGRIVQVTGSAVIVSHTETRTITSSWSLPDGRSIT 532

Query: 493  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL------EYEISCLDINPIGENPSY 546
               A    +L++ GG  LV L++ + + +E   A+       E ++SC+ +     + + 
Sbjct: 533  AVAAEGDSLLVSIGGAELVVLDLSN-VSSERLEARTRRTFESEEQVSCIAL-----SKAV 586

Query: 547  SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF--EGISYLLCAL 600
              +  VG W +  V   SL DL  I  E +        +PRSV+L     +    L   L
Sbjct: 587  RDVCVVGFWQESRVAFLSLHDLQPIATERVADSFDTSAVPRSVVLANILQDAPPTLFVGL 646

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQP--ITLRTFSSKNTTHVFAASDRPTVIYSSNK 658
             DG+++ + +       T RK   LGTQ    TL         +VFA  + P++IY    
Sbjct: 647  ADGNVVTYTVQSPQQPFTSRKSTILGTQQANFTLLPRGDGVLDNVFATCEHPSLIYGQEG 706

Query: 659  KLLYSNVNLKEVSHMCPFNSAAFPDSLAIA-KEGELTIGTIDDIQKLHIRSIPLGEHPRR 717
            + +YS V  +    +C F+S A+  ++AIA +EGEL +  +D+ +  H++++ +GE  RR
Sbjct: 707  RTVYSAVTAETAQSICSFDSEAYSGAIAIATEEGELKLAMVDEERTTHVQTLRVGETVRR 766

Query: 718  ICHQEQSRTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
            I +  + + F + ++K   ++  EE    F +L+D+  F+ + T  L+  E    ++ C 
Sbjct: 767  IAYSTELKAFGLGTIKRVLRAGVEEVTSSF-KLVDEVAFQELHTVALNEDELVECVMRCQ 825

Query: 776  FSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLN 829
              D S        + VGTAY+     + TKGRILV  + E+ +L+++AE   KGA   L 
Sbjct: 826  LDDGSGTGETAERFVVGTAYLDDAPQQQTKGRILVLEVTEERRLKVVAELGLKGACRCLA 885

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 889
               G+++AA+ + + +Y    +      L  +  +      + +   G  I V DLMKS+
Sbjct: 886  VVLGRIVAALVKTVVIYALEYQTPSHPFLVKKAAYRTSTAPIDICVTGSTIAVTDLMKSV 945

Query: 890  SLLIYKHEEGAI----EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 945
            SL+ YK   G +     E AR Y   W +A+  + ++ YL A+   NL  ++    G +D
Sbjct: 946  SLVSYKPGRGGVPDTLSEIARHYETLWGTAIANVAENTYLEADAEGNLVVLQHEVNGYSD 1005

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 1005
            E+R RL  V E  LGE VNR R  S+    P +    +P     TV G I + A +   +
Sbjct: 1006 EDRRRLRPVSEMLLGEMVNRIRSISV---QPTATAVVVPRAFLATVEGSIYLFALISPGK 1062

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFLDLSRTR 1062
               L +LQ  L + +K  G +   +WR F ++ + +  +    F+DG+L+E +L+     
Sbjct: 1063 QDLLMRLQALLAERVKSPGHVPFAKWRGFRSQVRDMGGEGPTRFVDGELVERYLEAPVEV 1122

Query: 1063 MDEISKTMNVSVEELCKRVEELTRLH 1088
              +++  +   VEEL   VE L R+H
Sbjct: 1123 QVDVASELGREVEELRGMVEGLRRMH 1148


>gi|452838792|gb|EME40732.1| hypothetical protein DOTSEDRAFT_177898 [Dothistroma septosporum
            NZE10]
          Length = 1138

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 349/1162 (30%), Positives = 588/1162 (50%), Gaps = 105/1162 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPML----DVPIYG 60
            Y+   H+P++V H+   +F +P   +LI+AK  R+E+   +P     P L       +YG
Sbjct: 3    YLAPIHRPSSVRHAIKLSFLAPDSEDLILAKANRLEV--WSPASPTDPTLVHRHTRALYG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQ 119
            ++  L   +P     D LF+ T+RY +  + W+ ++++L T +A  D++++  R +  G 
Sbjct: 61   KVTLLHKLKPATSQTDHLFVGTDRYHYFTISWNLKTNDLNTEKAYVDIAEKAARDSQTGD 120

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPF-----------DNK-GQLKEAFNIRLEELQVLDIK 167
               IDP  R + +  Y+G+  V+P            DN+ G+L E   +R+ EL V    
Sbjct: 121  RVHIDPTSRFMTIECYEGVVNVLPIAHAGKGKRKAADNEIGELHEPIPVRIPELFVRSSC 180

Query: 168  FLY------GCAKPTIVVLYQDNKDARHVKT----YEVALKDKD------FVEGPWSQNN 211
            FL+          P   +L++D+ +   +K     Y  +L+  D        +G   ++ 
Sbjct: 181  FLHRRQPTTKAVDPLFAILHEDSTNKVRLKIRELEYSPSLRPNDEPAVAELEKGHDVEDT 240

Query: 212  LDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP--SITKAYGRVDADGSRYL 269
            L+ GA +LIP+P P+ G+L++GE +I Y     ++     P    T        D  RY+
Sbjct: 241  LELGASILIPLPSPMHGLLVVGETSISYIEEWQYRVANTEPLDEATIFVAWCSLDDQRYV 300

Query: 270  LGDHAGLLHLLVITHEKE-KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L+LL++   +E +  G +I++LGETS AST+ YLD   V++GS  GDSQ+I++
Sbjct: 301  LADDYGKLYLLMVQQNREGEYHGHQIDILGETSRASTLVYLDGGRVFVGSHQGDSQIIQI 360

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDG 377
            + Q       +EVL+ + N+ PI+DF V+D+  +           GQ ++VT SGA+KDG
Sbjct: 361  SEQS------IEVLQTFPNIAPILDFTVMDMGNRSSDAPVNEFSSGQARIVTGSGAFKDG 414

Query: 378  SLRIVRNGIGINEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            SLR VR+G+G+ ++  +   G  I  ++SLRSS        LVVSF+ +TR+   + E +
Sbjct: 415  SLRSVRSGVGLEDRGDLGSLGAPISEVFSLRSSAAAKLVDTLVVSFVDQTRVFVFDQEGD 474

Query: 436  LEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE  E  GF     TLF  +    ++VQV+S S+ L  + S  + + W +P G ++   
Sbjct: 475  VEERDEFRGFSLSDATLFAGNLPDGRVVQVSSTSILLADAESGMITDTWAAPGGANITAV 534

Query: 495  TANASQVLLATGGGHLVYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAV 552
             A+ S++LL+  G  LV L++ G+ I  + +       E+SC     I  + S       
Sbjct: 535  AADRSKLLLSLSGKALVALDLSGESIAVQARREFSSTEEVSC-----IALSASIPDTCVA 589

Query: 553  GMWTDISVRIFSLPDLNLITKEHLGGE--IIPRSVLLCAF--EGISYLLCALGDGHLLNF 608
            G W D  V   SL +L  IT E +  +   +PRS+ +     +  + L   L DG+++ +
Sbjct: 590  GFWKDGKVAFLSLHNLEAITTERVADDDLAVPRSLSIATILRDQPATLFVGLADGNVVTY 649

Query: 609  LLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSNVNL 667
             +         RK + LGTQ          +   +VFA  + P++IY S  +++YS V  
Sbjct: 650  TIESLQKPFAARKSIILGTQQANFAVLPRGDGLQNVFATCEHPSLIYGSEGRMVYSAVTA 709

Query: 668  KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTF 727
            +  + +C FNS ++ +++AIA   EL I  +D+ +  H++ + + E  RR  +  + + F
Sbjct: 710  ESATSICSFNSNSYGNAIAIASNDELRIAAVDEERTTHVQDLFIHETVRRTAYSAELKAF 769

Query: 728  AICSLKNQSCA--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD---DSNV 782
             +  ++    A  EE + HF +L+D+  F+ + +Y L+  E   S++ C   D   D   
Sbjct: 770  GLGCIQRTLTAGQEEVKSHF-KLVDEVAFKELDSYELNEDELVESVIRCKLDDGSGDGAE 828

Query: 783  YYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             + VGTAY+  +++   +GRIL+  + ED +L+L+ E   KGA   L    GK++AA+ +
Sbjct: 829  RFAVGTAYLDDQDSNTARGRILILEVTEDRRLKLVTELSVKGACRCLAVCEGKIVAALIK 888

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA- 900
             + +Y +         L  +  +      + V   G+ I V DLMKS+SL+ YK      
Sbjct: 889  TVIIYDFEFAASKA-TLTKKASYRTATAPIDVCVTGNVIAVTDLMKSMSLVEYKKGRTGM 947

Query: 901  ---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 957
               + E AR +   W +AV  + D+ YL ++   NL  ++ ++ G ++E+R RL V  E 
Sbjct: 948  PDTLTEIARHFETLWGTAVANVADNTYLQSDAEGNLIVLQHDTNGFSEEDRRRLRVTSEL 1007

Query: 958  HLGEFVNRFR-------HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFL 1009
             LGE VNR R       HG+LV          IP     TV G I + A + P +Q L +
Sbjct: 1008 LLGEMVNRIRRIDVTPTHGALV----------IPRAFLATVEGSIYLFALIVPGKQDLLM 1057

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA---KNFLDGDLIESFLDLSRTRMDEI 1066
             ++Q N+  ++K  G +    +R F N+ +   A     F+DG+LIE FLD  +   +EI
Sbjct: 1058 -RMQNNMASLVKSPGHVEFATFRGFKNQVRDEGANGPSRFVDGELIERFLDCGQDIQEEI 1116

Query: 1067 SKTMNVSVEELCKRVEELTRLH 1088
             + + + +EE    VE L R+H
Sbjct: 1117 IRDLGIELEEARGMVESLRRIH 1138


>gi|449019082|dbj|BAM82484.1| UV-damaged DNA binding protein [Cyanidioschyzon merolae strain 10D]
          Length = 1372

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 384/1237 (31%), Positives = 583/1237 (47%), Gaps = 228/1237 (18%)

Query: 52   PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            P+  VP   R   +       ++ D +FI TER  F V+++D     + T   G ++ ++
Sbjct: 164  PLKPVPETARTVQVLPSDAGDQSTDAVFILTERLDFAVIKYDTRLQGVATLVAGSLASKL 223

Query: 112  GRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYG 171
            GR    G+   +DP  R + ++ YDGL KV+P    G   EAF +RL+ +QV  ++FL G
Sbjct: 224  GRRCPLGEFVALDPSARCLAVYAYDGLLKVVPGSLMG---EAFEVRLDVVQVQSMEFLIG 280

Query: 172  CAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPP------ 225
               PT+ +++ D    RH+ +YE+ L  +D  EGP +Q  LD  A+L+IPVPP       
Sbjct: 281  TEHPTLAIIHTDYLHNRHLVSYEILLGRQDVREGPIAQQYLDASAELIIPVPPAPNDSAN 340

Query: 226  --LCGVLIIGEET--------------IVYCSANAFKAI----PIR------PSITKAYG 259
               CG  ++  +T              +++     F  +    PI        S +    
Sbjct: 341  DGACGGFVVACDTSLALHPGRSGVAKQVIHFHGGQFAPMRCFCPISGIGGSSKSASVEAN 400

Query: 260  RVD----------ADG--SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTIS 307
            R D          A G  + YLLGD  G L++L +  E     G+++E + E+S+AS I+
Sbjct: 401  RQDHFETGLEMLAAAGYHAHYLLGDRDGFLYVLSVGAE----VGMRLECVCESSVASAIA 456

Query: 308  YLDNAVVYIGSSYGDSQLIKL-------------NLQPDAKGS----------------- 337
            YL + +V++GS+ GDSQL++L              L   A  S                 
Sbjct: 457  YLGSDLVFVGSALGDSQLVRLLPSQTESPELVQTTLFATASASSHERRESRAERAECQLW 516

Query: 338  YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 397
            + +V++ Y N+GPI D  V   +    G ++TCSG  + GSLRI+RNGIG  E A+VEL 
Sbjct: 517  FGQVVQCYTNIGPIQDLLVTGDDSFSDGHIITCSGVSRMGSLRIIRNGIGFVEHAAVELD 576

Query: 398  GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 457
            GIK +++L S T   +D FLVVSF +ETR+L +   DEL   E+E       T+      
Sbjct: 577  GIKALFTLPSLTSPEWDEFLVVSFTAETRVLRLAAHDEL--VEVESLAVDEATILAMRLP 634

Query: 458  YNQL-VQVTSGSVRLVSSTSRELRN-EWKSPPGYSVNVATANASQ--VLLATGGGHLVYL 513
              QL + VT+  V LV  T  E     W  P    +  A  +     VL++T    L  L
Sbjct: 635  AEQLALWVTASYVGLVDLTLLERPAVAWTPPSSEQITNAVFDELHKLVLVSTSNAQLYVL 694

Query: 514  EIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP------- 566
            +     L  V    L  E++C+       + +Y  I A+G W +  +R+F L        
Sbjct: 695  QQRKTSLVPVGSQTLPAEVACI-------HAAYG-IVALGTWAESRIRLFRLHEDTGNRW 746

Query: 567  DLNLITKEHLGGEIIPRSVLLCAFE----------GISY--LLCALGDGHLLNFLLNM-- 612
            +L  I +  L    +PRSVLL   +          G ++  LL A+GDG L  F ++   
Sbjct: 747  ELECIRESALPSTSVPRSVLLTYLDDHGGLMADHGGRAHLCLLVAVGDGRLFAFNVSQPD 806

Query: 613  --KTG-----------ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
              ++G           +L   +++ LG++P  L         +VFAA  R +VI++ +  
Sbjct: 807  AKRSGPEPEDLSKCELQLQHPRQLRLGSRPAALNNLQLHGMRYVFAACGRASVIHAHHGT 866

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            L   NVNL++V+    F++  FPDS+A+A E  L +G I+ IQ+LHIR   L E PRRI 
Sbjct: 867  LFCGNVNLRDVTRAVRFHTKGFPDSIAVATEQGLALGGIEHIQQLHIRRHDLREQPRRIA 926

Query: 720  HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
            H    R + IC L   S     E H VRLL+D+T E I+++ L   E+G S+++    D 
Sbjct: 927  HL---RGY-IC-LLTVSIVFGEERHHVRLLNDETLETITSHDLAMNEHGLSLVAIPERD- 980

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF-------- 831
                + VGTAYVLP E EP++GRILVF     +L L+ E  T GAVY+++A         
Sbjct: 981  ---VFVVGTAYVLPSEMEPSRGRILVF--SREELLLLNELYTPGAVYTMSALADPSDRTC 1035

Query: 832  -----NGKLLAA-INQKIQLYKWMLRDDGTR-ELQSECGHHGHILALYVQTRGDFIVVGD 884
                   + LAA +N  + LY W     G   EL+    H GH+L L ++ RGD ++VGD
Sbjct: 1036 RFPASAARFLAAGVNNVVILYDWGQSGHGDDYELREVARHLGHVLVLRLEARGDQLLVGD 1095

Query: 885  LMKSISLLIYKHEEG--------AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
            LMKS+ +L     EG         ++  A DY   W++A   L++D YL A+N++NL ++
Sbjct: 1096 LMKSLCVLQLVLPEGETSDGASPCLKAVAWDYETAWITACAFLNEDTYLAADNSYNLLSL 1155

Query: 937  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS------------------ 978
            ++N      E R  L   G +HLG+ VN FR G LV     +                  
Sbjct: 1156 QRNPHETRSEFRHALNRAGAFHLGDLVNVFRRGKLVTEASGNEEAGTGNGHSTIDTESTR 1215

Query: 979  DVGQIP------------TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK----- 1021
            DV +              T++F T  G IG+I  L   Q+  L +++  LR +       
Sbjct: 1216 DVARASTGTTTADNVSRQTLLFATTAGAIGIIVPLDPAQHRMLSRVEKALRSLTDHPAEA 1275

Query: 1022 --------------------GVGGLNHEQWRSFNNEKK----------TVDAKNFLDGDL 1051
                                GV G  H  WR+  +E+            +  + F+DGDL
Sbjct: 1276 GAADNGHERVRRSPLTSIRLGVEGFAHADWRTPLSERALNSLHSMTCFDLPRRGFVDGDL 1335

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +E F +L  T M+ ++  +  S+E +   V++L RLH
Sbjct: 1336 VERFRELEPTEMEFVAAQVGASIEHIKLLVDDLARLH 1372



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 7/70 (10%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQPMLDVPI 58
           YVVTA +P+ VTH+ V  F SP + ++++ +  RIE++ ++          L    ++P+
Sbjct: 38  YVVTAAQPSIVTHARVARFISPDQPSVLLVRLNRIEVYEVSTDSTKSHESALVAYANLPV 97

Query: 59  YGRIATLELF 68
           +GRIA LE+ 
Sbjct: 98  FGRIAALEVL 107


>gi|398391687|ref|XP_003849303.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
 gi|339469180|gb|EGP84279.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
          Length = 1143

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 343/1158 (29%), Positives = 574/1158 (49%), Gaps = 92/1158 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ-GLQPMLDV----PIYG 60
            Y+   H+ ++V H+   +F  P   +LI+AK  R+EI    PQ    P L +     +YG
Sbjct: 3    YLAPIHRASSVRHAIKLSFLGPDTQDLIVAKANRLEIWSSNPQFPDDPTLFLQHTKALYG 62

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQ 119
            +   L   RP     D LF+ T+RY +  L WDAE  EL T ++  D++++  R +  G 
Sbjct: 63   KATLLHKLRPATSPTDHLFVGTDRYNYLTLSWDAELKELKTEKSYVDIAEKAARDSQTGD 122

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPF------------DNKGQLKEAFNIRLEELQVLDIK 167
               IDP  R + L  Y+G+  ++P             D  G+L +   +R+ EL V    
Sbjct: 123  RVHIDPTSRFMTLECYEGVVNILPIAHAGKGKRKAADDEIGELADPIQVRIPELFVRSTC 182

Query: 168  FLY------GCAKPTIVVLYQDNKDARHVKTYEVAL----------KDKDFVEGPWSQNN 211
            FL+        AKP   ++Y+D+++   +K  E+               D  EG      
Sbjct: 183  FLHRRQAGAKHAKPAFALMYEDSQNKVRIKVRELEYGQSLRPSEEPSTADLDEGKEVSGQ 242

Query: 212  LDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVD---ADGSRY 268
            L+ GA  LIP+PPP+ G+L++GE +I Y      +    +P + +A   VD    D  RY
Sbjct: 243  LELGASHLIPLPPPMYGMLVVGETSISYVEEFEHQVKETQP-LEEATVFVDWCQIDDQRY 301

Query: 269  LLGDHAGLLHLLVITHEKE-KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
             L D  G L+LL+I      + +  +I++LGETS AST+ YLD   V++GS  GDSQ+I+
Sbjct: 302  ALADDYGKLYLLMIQQTSNGEYSSHQIDILGETSRASTLVYLDEGRVFVGSHQGDSQIIQ 361

Query: 328  LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKD 376
            +  Q       +EVL+ + N+ PI+DF V+D+  +           GQ ++VT SGA+KD
Sbjct: 362  ILPQK------IEVLQTFPNIAPILDFAVMDMGNRSSDAPVNEFSSGQARIVTGSGAFKD 415

Query: 377  GSLRIVRNGIGINEQASV-ELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 434
            GSLR VR+G+G+ ++  +  L   I  +++LRS         LVVSF+S TR+     E 
Sbjct: 416  GSLRSVRSGVGLEDRGDLGSLDAPISSLFALRSRPAPAVVNTLVVSFVSHTRVFVFTAEG 475

Query: 435  ELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 493
            ++EE E   GF     TL   +    +++Q+T+ SV L       + + W+SP G S+  
Sbjct: 476  DVEEQEQYRGFELGESTLHAGNLADGRVIQITNSSVVLADQEGDMVTDRWQSPSGTSITA 535

Query: 494  ATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY----EISCLDINPIGENPSYSQI 549
             +AN + +L++  G  L+ L++    +    HAQ E+    ++SC+ ++P     S    
Sbjct: 536  VSANGNNILVSLKGASLLVLDVSGSTIK--VHAQREFGSDEQVSCIALSP-----SIPTQ 588

Query: 550  AAVGMWTDISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCA-FEG-ISYLLCALGDGH 604
               G W D  V    L  L     E +  E    +PRS+ +    EG  + L   L DG+
Sbjct: 589  CVAGFWKDGKVAFLDLETLKTQASETVTEEDSLAVPRSLTVAKILEGQPATLFVGLADGN 648

Query: 605  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYS 663
            ++ + +   +   T RK + LGTQ          N   +VFA  + P++IY S  ++++S
Sbjct: 649  VVTYSIQSASNPFTARKSIILGTQQANFAVLPRDNGLENVFATCEHPSLIYGSEGRIVFS 708

Query: 664  NVNLKEVSHMCPFNS-AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQE 722
             V  +  + +C F+S   + +++AIA   EL I  +D+ +  H++ + L +  RRI +  
Sbjct: 709  AVTAENATCICSFDSFEPYGNAIAIASNDELKIAVVDEERTTHVQDLFLNQTVRRIAYSA 768

Query: 723  QSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 781
              + F + C  +  S   E  +   +L+D+  F+ + +Y L+  E   S++ C   D S 
Sbjct: 769  DMKAFGLGCIRRTLSAGREEVVSCFKLVDEIAFKELDSYQLNEDELVESVIRCKLDDGSG 828

Query: 782  ---VYYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 837
                 + +GTAY+  ++    KGRILV  + ED +L+L+ E   +GA   L   +G+++A
Sbjct: 829  GDAERFVIGTAYLDDQDASNAKGRILVLEVTEDRRLKLVTEISVRGACRCLAVSHGRIVA 888

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            A+ + + +Y +      +  +  +  +      + +   GD I V DLMKS+SL+ +   
Sbjct: 889  ALIKTVIIYSFEYETPSSPAMVKKAAYRTSTAPIDMCVTGDIIAVTDLMKSMSLVQHTLG 948

Query: 898  EGA----IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            +      + E AR ++  W +AV  +D++IYL ++   NL  +  + +G ++E+R RL V
Sbjct: 949  QAGGPDNLTEVARHFDTLWGTAVANVDENIYLESDAEGNLVVLEHDVKGFSEEDRRRLRV 1008

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
              E  LGE VNR R   +    P  +   IP     TV G I + A +   +   L ++Q
Sbjct: 1009 TSEILLGEMVNRIRRIDVS---PTPNATVIPRAFLATVEGSIYLFALIAEGKQDLLIRMQ 1065

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFLDLSRTRMDEISKTM 1070
              + ++++  G +   ++R F  + + +  +    F+DG+LIE FLD       E++K +
Sbjct: 1066 NKMAEMVQSPGHVPFAKFRGFKTQVRDMGEEGPSRFVDGELIERFLDCDEDVQAEVAKEL 1125

Query: 1071 NVSVEELCKRVEELTRLH 1088
               VEEL   VE L R+H
Sbjct: 1126 GGDVEELKIMVEGLKRIH 1143


>gi|390342012|ref|XP_793599.3| PREDICTED: uncharacterized protein LOC588842 [Strongylocentrotus
           purpuratus]
          Length = 1161

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/513 (49%), Positives = 347/513 (67%), Gaps = 42/513 (8%)

Query: 96  SSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFN 155
           + E+I +A G+V DRIGRP++ G IGIIDP+CR+IGL LYDGLFK+IP D   +  +AFN
Sbjct: 28  TEEIIPKAQGNVQDRIGRPSETGPIGIIDPECRMIGLRLYDGLFKIIPLDRDNKELKAFN 87

Query: 156 IRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNG 215
           IRLEEL V+D++FLYGC +PTIV L+QD    RHVKTYEV L++K+F  GPW Q+N++  
Sbjct: 88  IRLEELNVIDVQFLYGCHQPTIVFLHQD-PHGRHVKTYEVNLREKEFNRGPWKQDNVETE 146

Query: 216 ADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYGRVDADGSRYLLGD 272
           A ++I VP P  G LIIG+E+I Y   + + AI    I+ S    YGR+D +GSRYLLGD
Sbjct: 147 ATMVIAVPQPYGGALIIGQESITYHKGDNYVAIAPPTIKNSTLVCYGRLDNNGSRYLLGD 206

Query: 273 HAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
             G L LL++  E+       V  LK+E LGETSIA  ++YLDN VV+IGS  GDSQL++
Sbjct: 207 LTGRLFLLLLDKEESMDGAATVKDLKLEFLGETSIAECLTYLDNGVVFIGSRLGDSQLVR 266

Query: 328 LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIG 387
           LN + D  GSYV ++E + NLGPIVD  VVDL+RQGQGQ+VTCSGAYK+GSLRI+RNGIG
Sbjct: 267 LNTESDESGSYVTMMETFTNLGPIVDMAVVDLDRQGQGQLVTCSGAYKEGSLRIIRNGIG 326

Query: 388 INEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
           I+E AS++L GIKG+W L+   +  FD  LV+SF+ +TR+ +                  
Sbjct: 327 IHEHASIDLPGIKGIWPLKVDMNSQFDDTLVLSFVGQTRVKSF----------------- 369

Query: 448 TQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGG 507
                        +  +T  SVRLVS+ ++ + +EW+   G +++VA+ N+ QV+ A  G
Sbjct: 370 -------------INYITGASVRLVSTPTKRMVSEWRPQSGKNISVASCNSKQVVCA-AG 415

Query: 508 GHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD 567
             + YLEI +G + +V    +E+E++CLDI P+  +  ++ + AVG+WTDIS RI  +P 
Sbjct: 416 SDIFYLEIFEGEVRQVSTVTMEHEVACLDITPLTGD--FTDLCAVGLWTDISARILKIPT 473

Query: 568 LNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
           +  +  E LGGEIIPRS+LL  FEG +Y+LCAL
Sbjct: 474 MESMHVELLGGEIIPRSILLMTFEGQNYILCAL 506


>gi|242803623|ref|XP_002484212.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218717557|gb|EED16978.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1140

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 359/1156 (31%), Positives = 578/1156 (50%), Gaps = 91/1156 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ ++V ++   NF  P+E  L++AK  R+E + +TP GL       +Y +I+ L
Sbjct: 3    YVVPIHRASSVRYALKLNFLEPEEDCLVVAKGARLEFYSITPDGLTLTTSRALYAKISML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D L + T++  +  L+WD+E   + T R+  D++D+  RP  NG   +I
Sbjct: 63   ARLPTPTNSTTDHLLVGTDQNTYFTLKWDSEKQRVRTERSYVDLADKASRPCQNGDRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIP------------------FDNK-------GQLKEAFNIRL 158
            DP  R + L +++G+  VIP                  + N        G+L E    R+
Sbjct: 123  DPSGRFMTLEMFEGIITVIPIIQPHKKRGKPPVLKTSHYSNPDEPVPQIGELGEPMPTRI 182

Query: 159  EELQVLDIKFLY--GCAKPTIVVLYQDNKDARHVKTYEV---ALKDKDFVEGPWSQNNLD 213
            +EL V    FL+    A P + +L++DN+    +K  E+   A  +  F E       LD
Sbjct: 183  DELMVRSSAFLHVESKAAPRLALLHEDNQRKVRLKIRELHFEASTEVVFQETEDFTEELD 242

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP--SITKAYGRVDADGSRYLLG 271
             GA  LIPVP PL G+L++GE  I Y      + I  RP    T     V  DG R+LL 
Sbjct: 243  LGASHLIPVPAPLGGLLVLGETCIKYIDDANNETIS-RPLDEATIFVAWVQVDGQRWLLA 301

Query: 272  DHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL 330
            D  G L  L+++   + +V G KI+ LG  S AS + YL   + +IGS  GDSQ+I++  
Sbjct: 302  DDYGRLFFLMLVLDSRNEVEGWKIDYLGSASRASVLIYLGAGMTFIGSHQGDSQVIRI-- 359

Query: 331  QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSL 379
               ++GS+ E+++   N+ PI+DF ++DL  +           GQ ++VT SGA+ DG+L
Sbjct: 360  ---SEGSF-EIIQTISNIAPILDFTIMDLGTREGDNYTHEFSSGQARIVTGSGAFNDGTL 415

Query: 380  RIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            R VR+G+G+ E   + E++ I  MW+L+ S+ D F   LVV+F++ETRI   + + E+EE
Sbjct: 416  RSVRSGVGMEELGVLGEMEHITDMWALQVSSTDEFSDTLVVTFVNETRIFQFSSDGEVEE 475

Query: 439  -TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
              E  G      TL  ++    +++ VT   V +  + S  + ++W SP   ++  A  N
Sbjct: 476  LDEFLGLNLAENTLLSNNLPGGRIIHVTERGVSIADTDSGMVISKW-SPDEQTITSAACN 534

Query: 498  ASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
              ++++ TGG  +V L+I GD  +   K    + ++S + I P     + +Q        
Sbjct: 535  DERLVVVTGGQVIVVLDITGDLKVLSQKDFDKDNQVSGVTIPP-----ASTQAFIAAFPQ 589

Query: 557  DISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNM 612
               V + S  D   +  + LG   E  PR+VLL     +  S L  ++ DG ++ F  + 
Sbjct: 590  KAQVAVLSFQDFKELHSQSLGIASEAFPRAVLLAEILEDSPSTLFVSMADGSVVTFFYDS 649

Query: 613  KTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
                LT + K+ LG++  T +     N  + VFA  + P++IY S  +++YS VN +  S
Sbjct: 650  DNHSLTSKNKLILGSEQPTFKKLPRGNGLYNVFATCEHPSLIYGSEGRIIYSAVNSEGAS 709

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 731
             +C FN+ A+PD++A+A   +L I  +D  +   I+++P+    RR+ +    + F I +
Sbjct: 710  RVCHFNAEAYPDAIAVATSKDLKIALVDKERTTQIQTLPIEATVRRVAYSPTEKAFGIGT 769

Query: 732  LKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY------ 783
            +K   Q  AE  E  FV L D+  F  + ++ L   E   S++       S+ Y      
Sbjct: 770  IKRRLQDGAEIVESQFV-LADEIMFRKLDSFDLKPDELVESVIRAQMVVGSDAYNKPIYK 828

Query: 784  --YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
              + VGTAY+  E  E  +GRIL+F V+   KL L  E   KGA  +L     K++AA+ 
Sbjct: 829  DRFIVGTAYLDDETAESIRGRILLFEVDSNRKLSLFLEHPVKGACRALAMMGNKIVAALV 888

Query: 841  QKIQLYKWMLRDD-GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            + + ++    +   G   L+    +      + +      IVV DLMKSIS ++  H+  
Sbjct: 889  KTVVIFDVERKSQLGKHALKKVAAYRTSTAPVDIAVTDSTIVVADLMKSIS-IVESHKTD 947

Query: 900  AI----EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 955
            A+    +E AR +   W +AV  +  + +L ++   NL  +R+N +G T+E+R RLEV  
Sbjct: 948  ALTVEAKEVARHFATVWTTAVADIGSNQWLVSDAEGNLIVLRRNVDGVTEEDRRRLEVTS 1007

Query: 956  EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            E  LGE VNR R  ++   L  S V   P    GTV G I + A +  E   FL +LQT 
Sbjct: 1008 ELLLGEMVNRIRPVNI---LQTSTVAVNPKAFLGTVEGSIYLFALINPEHQDFLMRLQTA 1064

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTM--NV 1072
            +   +   G +   ++R+F +  +  D    F+DG+LIE FLD  R   +EI   +    
Sbjct: 1065 ITAYVDSPGYMPFSKFRAFRSSVREGDEPFRFVDGELIERFLDCDRPVQEEILGVVGSGY 1124

Query: 1073 SVEELCKRVEELTRLH 1088
             +E + K +E L RLH
Sbjct: 1125 DLESVQKMIEALRRLH 1140


>gi|167517245|ref|XP_001742963.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778062|gb|EDQ91677.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1670

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 338/1138 (29%), Positives = 576/1138 (50%), Gaps = 77/1138 (6%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV++ KP+ VT +   NFT+P ELNL+I K + +E++ +  +GL+P++D  +YG +  +
Sbjct: 48   YVVSSFKPSAVTTAVRANFTAPDELNLLILKHSHLEVYKVVEEGLEPVMDKDLYGSVLAM 107

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
             + R  G  +D +F+ T  ++F +L  D E + ++T   G+      RP D G    + P
Sbjct: 108  NVIRLPGWERDAVFLLTSTFRFFILASD-EDNGVVTVIKGNALSSCQRPADCGVHVAVHP 166

Query: 126  DCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNK 185
                I + +Y G   +IPFD  G+  EA+++ +    +LD  F+ G    T+ +L  D+ 
Sbjct: 167  KGNCIFVSVYPGNALIIPFDASGEPMEAYSVFVPVSSLLDATFVNGAHDFTLALLSDDDT 226

Query: 186  DARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAF 245
            +   +K + + ++++  VE   + + ++  +  L+P+     GVL++GEE     + +  
Sbjct: 227  NFTSLKMFHLDVEERTLVEEQLADSTINTYSSRLLPLWNLDSGVLVLGEELCHVVTPSGI 286

Query: 246  KAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-KVTGLKIELLGETSIAS 304
             +  +  S+  A G +D DGSR L+GD  G LHLLV+    E +VT +  + LG  S  S
Sbjct: 287  ISSNLSESLPVAAGIIDTDGSRILIGDELGDLHLLVLEGIAERRVTSIVRQHLGRISTPS 346

Query: 305  TISYLDNAVVYIGSSYGDSQLIKL--NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ 362
             I YLDN VVYIGS   D QLI+L  ++Q +A    V+VL+ Y N+GPIVDF +VDL+  
Sbjct: 347  AIVYLDNGVVYIGSDQADCQLIQLLSHVQAEADNK-VKVLQEYPNIGPIVDFEMVDLDGH 405

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST---DDPFDTFLVV 419
            GQ QVV+C G+ +DG LRI+R G+GI+  AS++L+G++ +W LRS++   +D  D  L +
Sbjct: 406  GQQQVVSCCGSNQDGCLRILRKGVGIDVLASLDLEGLQDLWCLRSASNLGEDQHDV-LAL 464

Query: 420  SFISETRILAMNLED--------------ELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
             F+ +T  L++  ++              EL+  ++ G  ++   L C +      + VT
Sbjct: 465  KFLEQTAFLSLAGDEVCLLYSTPTSHSYTELDGVDVAGANTELPALHCGNVRDGMWLVVT 524

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG-HLVYLEIGDGILTEVK 524
            S   RL+ +  R     W  P G  ++V  +    + +A+G   + + L   +G L ++K
Sbjct: 525  SQDARLLDAVDRTEVTRWSPPNGKGIDVCASTGDLLAVASGSDLYALSLSRTEG-LHDMK 583

Query: 525  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS 584
            +A L++EI+CL I   G +     I A G+WTD S+R FS   L    K  +  +++  S
Sbjct: 584  NATLDHEIACLSIRASGPDQGAGTILA-GLWTDFSLRAFSTRTLEEQAKVEVPTQVVSSS 642

Query: 585  VLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
            V     EG  Y     GDG L   + +  +        V +G+ P+ LR         VF
Sbjct: 643  VASVTMEGTCYFFIGHGDGKLAYGVFDPLSSTFGAPHVVQVGSLPVKLRACKRGKDEFVF 702

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
             A+DRP V+ S   KLL+ NV+          N+ A+ D LA  ++  L  G ++++Q L
Sbjct: 703  VATDRPMVVSSRRGKLLFCNVSAGACRTADVLNAEAYVDCLAYVEQDRLVFGKMENMQNL 762

Query: 705  HIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE-MHFVRLLDDQTFEFISTYPLD 763
             IR IPL E P  + + + S  F + +   ++C    E + ++RL+D Q+FE   ++ L+
Sbjct: 763  QIRKIPLDETPLGVTYHKSSGAFCVATDAARACPTPQEPICYLRLIDAQSFEVRDSFKLE 822

Query: 764  TFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV-EDGKLQLIAEKE 820
              E  +G S+ +    +DS  Y  VGTA   P    P +GRILV  V +DGKL+L+    
Sbjct: 823  QAESLFGHSLHTMQLRNDSTEYIVVGTAMHDPNRPLPKQGRILVLRVNDDGKLELVVSHA 882

Query: 821  TK-GAVYSLNAFNGKLLAAINQKIQLYKWMLRD-DGTRELQSECGHHGHILALYVQTRGD 878
               G ++SL AF   ++A IN +++ +       +   E+ S+    G      +   G+
Sbjct: 883  IHDGGIFSLQAFRDGVVAGINGRLEYFSLESTPLERKVEVASQTVFRGMQTVSCLGVCGN 942

Query: 879  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 938
             ++VGD+++S++ + Y  +         D  + ++    +  +D +L  +++ NL     
Sbjct: 943  TVLVGDILQSVTAVNYSEQRNRFVVGPGDPESRYLLTCFLPAEDRFLFCDSDQNLVLGMP 1002

Query: 939  NSEGATDEERGRLEVVGEYHLGEFVN-------------------------------RFR 967
              +   + +   + + G  H+G+ +N                               RF 
Sbjct: 1003 PVD-TVENDASLMHLAGRIHIGDNINSYVICACIHVWTPYLLCPDSTFCFAALFVTSRFA 1061

Query: 968  HGSLVMRLP-DSDVGQI----------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
             GSL +     ++ G+           P ++F TV G +G+I  +  +   F+ ++Q  L
Sbjct: 1062 FGSLSLSYERPAEAGEAGEDGAKQQSSPPIVFTTVLGGVGMILEVQQKHLWFMHEMQRRL 1121

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
              +   VGGL HE +RS  N K+     A+ F+DG+LIESFL+L+   M+E+ K  ++
Sbjct: 1122 ADMGNAVGGLTHEDYRSTKNGKRESVTPARCFVDGNLIESFLELTPEEMEEVMKEFHI 1179


>gi|430814207|emb|CCJ28534.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 904

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 309/909 (33%), Positives = 511/909 (56%), Gaps = 69/909 (7%)

Query: 174  KPTIVVLYQDNKDARHVKTYEVAL--KDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLI 231
            +PTI VLYQD+K A+H+ +YE+ +  ++K   EGP    +LD G+ LLIP+     G++I
Sbjct: 8    RPTIAVLYQDSKYAKHLSSYEIIVQSREKRMKEGPLKSRDLDIGSSLLIPLLDS--GIII 65

Query: 232  IGEETIVYCSANA-FKA---IPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
            +GE+T++Y   N+  K+   IPI P++  +Y  ++   ++++L D  G + +L +++  +
Sbjct: 66   VGEQTLMYIHPNSEIKSKFIIPI-PTVFSSYTTIN--NNKHILADDYGRIFMLTLSNSYK 122

Query: 288  KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVN 347
                +KI  +G TSIAS + YL N+ ++IGS YGDSQL+ +   PD       VL+ + N
Sbjct: 123  DSNFMKISQIGITSIASVLVYLPNSYLFIGSHYGDSQLVNI---PDCL-----VLQSFPN 174

Query: 348  LGPIVDFCVVDLERQGQGQ-VVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSL 405
            + PI DFC V   R+G+ + +VTCSGAYKDGSLRI+R  + +N+   +  L GI G+W L
Sbjct: 175  ISPISDFCFV--TREGRNEFIVTCSGAYKDGSLRILRYNVEMNKTLEISNLNGIYGIWGL 232

Query: 406  RSSTDDPFDTFLVVSFISETRILAM--NLEDELEETEIEGFC---SQTQTLFCHDAIYNQ 460
                +  + T LV+SF++ETRIL +  N+ +E E  E + F    ++  TL   +   N 
Sbjct: 233  YLQNEFEY-TALVLSFVNETRILKVFHNILNEPEIEEWDNFAIPNAKLPTLVAKNVNNNL 291

Query: 461  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGIL 520
               +++ S+ L+   S  +  EW       +  A  +     ++   G +V   + +  +
Sbjct: 292  FCFISNKSICLIDWKSNLVLKEWIPTADDIITCACLDTEFASVSLTKGKIVVFSLKNMTI 351

Query: 521  TEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
             E+   +  YE+SC+DI       S + + +VG+W   S+ I S+P + L+    L G +
Sbjct: 352  VEIGEYKFNYEVSCIDI-------SNNALISVGLWIVPSIHILSIPSMELLLSHSLLGTV 404

Query: 581  IPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +PRS+ + +   ++   +L  +GDG LL++ L+           +  GT PI L  F + 
Sbjct: 405  VPRSICIVSLASMNKPVILVGMGDGTLLSYGLD----------GLDKGTLPINLSKFITP 454

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
               +VFA SDR  +IY S+ KL +S++NLKE++ M  F S+ F  ++ +  E  + IG+I
Sbjct: 455  IGMNVFAISDRSIIIYGSSGKLSFSSINLKEINCMSSFISSIFSSTIVVVSENIIKIGSI 514

Query: 699  DDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---NQSCAEESEMHFVRLLDDQTFE 755
            D +Q+L I++IPLGE PRRIC+ ++ + F + ++K     S   E +  ++++LD  +F+
Sbjct: 515  DSLQQLQIQTIPLGELPRRICYHDKQKVFGVLTIKLSLEASNGNEVQTSYLKILDVTSFD 574

Query: 756  FISTYPLDTFEY---GCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK 812
             I    LD+F+     C     S + D+   + VGT + LPEE E +KGRI++F V + K
Sbjct: 575  GI----LDSFQLELNECVQCITSVTIDNQDIFVVGTGFSLPEEEESSKGRIILFGVTNKK 630

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            + + +E +   AVY +   + K++A IN  + +Y +   D   +       +    L L 
Sbjct: 631  IWVFSEIQVNDAVYCIGIIDNKIIAGINALVHIYAY---DSSLKNFNVIATYRSTTLCLS 687

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGA--IEERARDYNANWMSAVEILDDDIYLGAENN 930
            +   G  +++GDLMKS+SLL + + E    ++E A+D N  WM+ V  LD+D+Y+GAE  
Sbjct: 688  LAVHGTHVIIGDLMKSVSLLAFINTENGPRLKEVAKDCNPLWMTCVAALDNDLYIGAEAE 747

Query: 931  FNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
             NL    K+    T  E  +L+++ E   GE VN+ + G++   L   +   IP   F T
Sbjct: 748  GNLSLFWKDFN--TTFEENKLQIISEIKWGELVNQIKPGTI---LYSENSIIIPKATFVT 802

Query: 991  VNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF-NNEKKTVDAKNFLDG 1049
            V+G IG+I ++  E   FL  LQ+N+ K+I G+G LNH  WR+F N  KK+ + K F+DG
Sbjct: 803  VDGSIGIIFTVKREYLEFLVNLQSNMGKIISGIGCLNHSNWRAFCNRRKKSNEPKCFIDG 862

Query: 1050 DLIESFLDL 1058
            D +E F++L
Sbjct: 863  DFVEIFINL 871


>gi|453081643|gb|EMF09692.1| DNA damage-binding protein 1 [Mycosphaerella populorum SO2202]
          Length = 1151

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 337/1148 (29%), Positives = 586/1148 (51%), Gaps = 96/1148 (8%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGL-QPMLDV----PIY 59
            +Y+   H+P++V H+   +FT+P   +LI+AK  R+EI    PQ    P L +     IY
Sbjct: 2    SYIAPIHRPSSVRHAIKLSFTAPDAEDLIVAKANRLEIWATNPQQPGDPTLVLQHTRAIY 61

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNG 118
            G++  L+  RP     D LF+ T+RY +  L WDA++  L T ++M D++D+  R +  G
Sbjct: 62   GKVTMLQKLRPATSPTDHLFVGTDRYNYFTLSWDADTRRLKTEKSMVDIADKSARDSQTG 121

Query: 119  QIGIIDPDCRLIGLHLYDGLFKVIPF-----------DNK-GQLKEAFNIRLEELQVLDI 166
                IDP  R + L  Y+G+  V+P            DN+ G+L +   +R+ EL V   
Sbjct: 122  DRVHIDPTARFMTLECYEGVVNVLPIAHAGKGKRRAADNEIGELGDPIPVRIPELYVRSS 181

Query: 167  KFLYG------CAKPTIVVLYQDNKDARHVKT----YEVALKDKD------FVEGPWSQN 210
             FL+        A P   VL++D+++   +K     Y+ +L+  +         G   Q 
Sbjct: 182  CFLHKRHGGTKIADPVFAVLHEDSQNMPRIKIRELEYQPSLRPNEEPATAELERGQEVQG 241

Query: 211  NLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGS 266
             ++ GA  LIP+P P  G LIIGE +I Y     ++ +  +P    +I  A+ ++D    
Sbjct: 242  KIEMGASHLIPLPAPTYGFLIIGETSISYVDEWKYEIVDTQPLDEATIFVAWCQIDE--Q 299

Query: 267  RYLLGDHAGLLHLLVITHEKE--KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
            R++L D  G L+LL++ H+K   +    +I++LGETS AST+ YLD   V++GS  GDSQ
Sbjct: 300  RFVLADDYGKLYLLMV-HQKADGEYQSQQIDVLGETSRASTLVYLDEGRVFVGSHQGDSQ 358

Query: 325  LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGA 373
            +I++  Q       +EVL+ + N+ PI+DF V+D+  +           GQ ++VT SGA
Sbjct: 359  IIQILPQ------RIEVLQTFSNIAPILDFTVMDMGNRSADAPVNEFSSGQARIVTGSGA 412

Query: 374  YKDGSLRIVRNGIGINEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            +KDGSLR VR+G+G+ ++ S+   G  I  ++SLRS         L+ SF+S +  +   
Sbjct: 413  FKDGSLRSVRSGVGLEDKGSLGDLGEPISAVFSLRSGPGVQAVDTLIASFVSHSSAIIFG 472

Query: 432  LEDELE-ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 490
             + ++E   E  GF     TL+  +    + VQVTS +V L  +    + + W++P G S
Sbjct: 473  SDGDIEARDEFRGFDLTQSTLYAGELPNGRAVQVTSSTVLLTDTEGDMITDRWEAPDGSS 532

Query: 491  VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYSQ 548
            +   +A+   VL++ G   L+ L++    +T   H QL  E +ISCL +     + S   
Sbjct: 533  ITSVSADGDHVLVSLGSAALIVLDLSGSSITVGAHRQLGNEEQISCLSL-----SRSLPG 587

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAF--EGISYLLCALGDG 603
               VG W D  V + SL DL  I  E +  +    +PRS+++ +   +  + L   L DG
Sbjct: 588  ACVVGFWKDSKVSVLSLSDLQPIASESVAEDDNLAVPRSLIVASILRDQPATLFVGLADG 647

Query: 604  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLLY 662
            +++ + +       + RK + LGTQ         S    +VFA  + P++IY S  +++Y
Sbjct: 648  NVVTYSVESLQRPFSARKSIILGTQQANFTVLPRSDGLQNVFATCEHPSLIYGSEGRMVY 707

Query: 663  SNVNLKEVSHMCPFNS-AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 721
            S V     + +C F+S   + +S+AIA   EL + ++D+ +  H++ +P+ E  RRI + 
Sbjct: 708  SAVTADSATSICAFDSFGDYANSIAIATGSELKLSSVDEERTTHVQDLPVYETVRRIAYS 767

Query: 722  EQSRTFAICSLKNQSCA--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
             + + F +  +K    A  EE   HF +L+D+  F+ + ++ L+  E   S++ C   D 
Sbjct: 768  SELKAFGLGCIKRTLAAGVEEVRSHF-KLVDEVAFKALDSWALNEDELVESVIRCPLDDG 826

Query: 780  SNV---YYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
            + +    + VGTAY+  ++    +GR+LVF + ED +++L+ E   KGA   L    G++
Sbjct: 827  TGLDAERFVVGTAYLDDQDANTARGRVLVFEVTEDRRIKLVTEMAVKGACRCLAVCKGRI 886

Query: 836  LAAINQKIQLYKWMLR-DDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLL 892
            +AA+ + + +  +       + +L  +  +      + ++  +    I + DLMKS++L+
Sbjct: 887  VAALVKTVVILAYEFSPPKSSPQLIKKASYRTSTAPIDIFASSLDGLIAISDLMKSLTLV 946

Query: 893  IYKH----EEGAIEERARDYNANWMSAVE-ILDDDIYLGAENNFNLFTVRKNSEGATDEE 947
             Y      +  ++ E AR ++  W +AV  I     Y+ ++   NL  +  +  G + E+
Sbjct: 947  KYTPGRTGQPDSLVEIARHFDTLWGTAVAPIPGTHSYIQSDAEGNLVVLEHDPTGFSAED 1006

Query: 948  RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL 1007
            R RL V  E  LGE VNR R  + V+  P ++   IP     TV G + V  ++  +   
Sbjct: 1007 RRRLRVTSEMCLGEMVNRIRPITTVI-TPSANAVVIPKAFIATVEGSVYVFGTIAQQYQD 1065

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFLDLSRTRMD 1064
             L +LQ ++ +++K  G +   ++R F  + + +  +    F+DG++IE FL LS    +
Sbjct: 1066 LLIRLQGSMAEMVKSPGFVRFNRFRGFKTQVRDMGEEGPVRFVDGEIIEGFLGLSAEVQE 1125

Query: 1065 EISKTMNV 1072
             ++K + V
Sbjct: 1126 SVAKDLGV 1133


>gi|170589357|ref|XP_001899440.1| CPSF A subunit region family protein [Brugia malayi]
 gi|158593653|gb|EDP32248.1| CPSF A subunit region family protein [Brugia malayi]
          Length = 655

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/658 (40%), Positives = 387/658 (58%), Gaps = 71/658 (10%)

Query: 497  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
            N  Q+++A G   L+YLE        +   + E+EISC+DI PIG+    S+I AVG WT
Sbjct: 3    NLGQLVVACGA-LLIYLEANSAGFKVITEIECEFEISCIDITPIGKGTLRSEICAVGYWT 61

Query: 557  DISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE 616
            D+SV + +LP L  + +E + G+++ RS++L   EG  YLL ALGDG +  F ++MKTG 
Sbjct: 62   DLSVALRALPQLVEVVREKIVGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTGA 121

Query: 617  LTDRKKVSLGTQPITLRTFSSKNTT--HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 674
            L D KK +LGTQPI LR F S+ +   ++F  SDRP VIYSSN+KLL+SNVNL+ VS M 
Sbjct: 122  LLDPKKATLGTQPIHLRKFRSRCSPVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMT 181

Query: 675  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI----- 729
            P  + A+PD+L +     L IG IDDIQKLHIR++PLGE P RI +Q ++ T A+     
Sbjct: 182  PLYAEAYPDALVLTDGHSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTIAVIVERL 241

Query: 730  ----------------------CSLKN------------------QSCAEESEMHFVRLL 749
                                  C+ KN                  +  AEE E+  V LL
Sbjct: 242  EVILFLFFYVFVDAMGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSVLLL 301

Query: 750  DDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 809
            D  TFE + ++ L+  E   S+ SC   DDS  Y+ VGTA ++ +E E   GRI++F   
Sbjct: 302  DSNTFEILHSHELEGSEMAMSLASCQLGDDSQPYFVVGTAVIMSDETESKMGRIMMFQAS 361

Query: 810  DG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 867
            +G  +++L+ EKE KGA YS+ + +GKL+ A+N  ++L++W       +EL+ EC    +
Sbjct: 362  EGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEW----TADKELRLECSDFDN 417

Query: 868  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 927
            + ALY++T+ D I+VGDLM+S+SLL YK  E   E+ ARD+  NWMSA EI+D D +LGA
Sbjct: 418  VTALYLKTKNDLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDSDNFLGA 477

Query: 928  ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 987
            EN++NLFTV K+S     EE  RL+ +G ++LGE VN F HGSL     D       +++
Sbjct: 478  ENSYNLFTVMKDSFTVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVAPLYHSSIL 537

Query: 988  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
            +GT +G IGVI  +P   Y FL+ +Q  L +  +    ++H Q+R+F  EK++     F+
Sbjct: 538  YGTSDGGIGVIVQMPPVLYTFLQDVQKRLAEYAENCMRISHTQYRTFETEKRSEAPNGFI 597

Query: 1048 DGDLIESFLDLSRTRMDEI-----------------SKTMNVSVEELCKRVEELTRLH 1088
            DGDLIES LD+ +  ++++                 ++ ++   E++ K VE+L+R+H
Sbjct: 598  DGDLIESLLDMGKDSVEQVVNGLKMPLLNSISSSETTELVDALAEDVLKLVEDLSRIH 655


>gi|350629921|gb|EHA18294.1| damage-specific DNA binding protein [Aspergillus niger ATCC 1015]
          Length = 1140

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 352/1157 (30%), Positives = 587/1157 (50%), Gaps = 93/1157 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ ++   +F + +E  L++AK  R+EI+ LTP+GL       ++ ++  L
Sbjct: 3    YVVPIHRASSIRNALKLHFMNAEEETLVVAKANRLEIYSLTPEGLNLAASCSLFAKVTML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +C L WD E +++ T R   D+SD   R    G   +I
Sbjct: 63   ARLPAPANSPTDHLFVGTDRYTYCTLSWDGERNQIRTERNYVDISDPSSREAQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+G+  V+P                        G+L E    R++EL V
Sbjct: 123  DPSGRFMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDELFV 182

Query: 164  LDIKFLY-GCAKPTIVVLYQDNKDARHVKT----YEVALK----DKDFVEG--PWSQNNL 212
                FL+     P + +LY+DN+    +K     Y  A      D  F E    +SQ  L
Sbjct: 183  RSSAFLHVQSGPPRLALLYEDNQKKVRLKVRALHYSAATASTGADAAFEESLDGFSQE-L 241

Query: 213  DNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRY 268
            D GA  LIPVP PL G+L++GE +I Y   ++ + +  RP    +I  A+ +VD+   R+
Sbjct: 242  DLGASHLIPVPAPLGGLLVLGETSIKYVDTDSNEIVS-RPLDEATIFVAWEQVDS--QRW 298

Query: 269  LLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            LL D  G L  L+++     +V   K++ LG T+ AS + YL   V+++GS  GDSQ+++
Sbjct: 299  LLADDYGRLFFLMLVLDSNNQVQSWKLDHLGNTARASVLIYLGGGVIFVGSHQGDSQVLR 358

Query: 328  LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKD 376
            +       GS +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ D
Sbjct: 359  I-----GNGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDD 412

Query: 377  GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            G+LR VR+G+G+ E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E
Sbjct: 413  GTLRSVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGE 472

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE +   G      TL   +    +++QVT   V +       + NEW  P    +  A
Sbjct: 473  VEELDSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSA 532

Query: 495  TANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 553
            +AN   ++L +GG  +  L+I + + +   K    + +IS + + P+    S + +  VG
Sbjct: 533  SANNDSIVLVSGGQLMTVLDINNDVRVISQKDFGADSQISGVTV-PL----SSAGVCIVG 587

Query: 554  MWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFL 609
                  V +  L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ + 
Sbjct: 588  FPQLAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYS 647

Query: 610  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLK 668
             +     LT   ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN +
Sbjct: 648  FDASNYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSE 707

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFA 728
              S +C FNS A+P S+A+A   +L I  +D  +   I+++P+GE  RR+ +    + F 
Sbjct: 708  GASRVCHFNSEAYPGSIAVATRHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFG 767

Query: 729  ICSL--KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSN 781
            I ++  K +  AE  +  FV L D+  F  +  + L   E   S++   FS     +  +
Sbjct: 768  IGTIERKLKDGAEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRD 826

Query: 782  VY---YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLA 837
            V+   + VGTAY+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++A
Sbjct: 827  VFKDRFVVGTAYLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVA 886

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            A+ + + +Y  +  D G  +L+    +      + V   G+ I V DLMKS+ L+ Y   
Sbjct: 887  ALVKTVVIYGVVNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEG 946

Query: 898  EG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            E     ++ E AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV
Sbjct: 947  ENGMPDSLTEVARHFQTVWATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEV 1006

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
             GE  LGE VNR R  + + +L  + V   P    GTV G I + A +  E   FL +LQ
Sbjct: 1007 TGEISLGEMVNRIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQ 1063

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN- 1071
              +   ++ +G +   ++R F +  ++T +   F+DG+LIE FL    +  +EI  ++  
Sbjct: 1064 ATMAGKVESLGNIPFNEFRGFRSMVRETKEPYRFVDGELIERFLTCEPSLQEEIVDSVGM 1123

Query: 1072 VSVEELCKRVEELTRLH 1088
            ++V+E+   +E L RLH
Sbjct: 1124 MNVDEVKIMIEALRRLH 1140


>gi|312076590|ref|XP_003140929.1| CPSF A subunit region family protein [Loa loa]
          Length = 655

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/652 (40%), Positives = 381/652 (58%), Gaps = 69/652 (10%)

Query: 502  LLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 561
            L+   G  L+YLE        +   + E+EISC+DI PIG     S+I AVG WTD+SV 
Sbjct: 8    LVIACGALLIYLEADSAGFKLISELECEFEISCIDITPIGNETLRSEICAVGYWTDLSVA 67

Query: 562  IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 621
            + +LP L  + +E + G+++ RS++L   EG  YLL ALGDG +  F ++MKTG L D K
Sbjct: 68   LRTLPQLMEVVREKIPGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTGALLDPK 127

Query: 622  KVSLGTQPITLRTFSSKNTT--HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 679
            K +LGTQPI LR F S+ ++  ++F  SDRP VIYSSN+KLL+SNVNL+ VS M P  + 
Sbjct: 128  KATLGTQPIHLRKFRSRCSSVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMTPLYAE 187

Query: 680  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI---------- 729
            A+PD+L +     L IG IDDIQKLHIR++PLGE P RI +Q ++ T A+          
Sbjct: 188  AYPDALVLTDGNSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTIAVTVERLEFVDA 247

Query: 730  --------CSLKN------------------QSCAEESEMHFVRLLDDQTFEFISTYPLD 763
                    C+ KN                  +  AEE E+  + LLD  TFE + ++ L+
Sbjct: 248  MGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSILLLDSNTFEILHSHELE 307

Query: 764  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKET 821
              E   S+ SC   +DS  Y+ VGTA ++ +E E   GRI++F   +G  +++L+ EKE 
Sbjct: 308  GSEMAMSLASCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEI 367

Query: 822  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 881
            KGA YS+ + +GKL+ A+N  ++L++W       +EL+ EC    ++ ALY++T+ D I+
Sbjct: 368  KGAAYSIQSMDGKLVVAVNSCVRLFEWT----ADKELRLECSDFDNVTALYLKTKNDLIL 423

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 941
            VGDLM+S+SLL YK  E   E+ ARD+  NWMSA EI+D D +LGAEN++NLFTV K+S 
Sbjct: 424  VGDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLFTVVKDSF 483

Query: 942  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 1001
                EE  RL+ +G ++LGE VN F HGSL     D       ++++GT +G IGVI  +
Sbjct: 484  TVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVAPLYHSSILYGTSDGGIGVIVQM 543

Query: 1002 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
            P   Y FL  +Q  L    +    ++H Q+R+F  EK++     F+DGDLIES LD+ + 
Sbjct: 544  PPVLYTFLHDVQKRLADYTENCMRISHTQYRTFETEKRSEVPNGFIDGDLIESLLDMGKD 603

Query: 1062 RMDEI-------------------------SKTMNVSVEELCKRVEELTRLH 1088
             + +I                         ++ ++ + E++ K VE+L+R+H
Sbjct: 604  SVGQIVNGLKMPLLNIIRVITLLPVPSSETTELVDATAEDVLKLVEDLSRIH 655


>gi|452979181|gb|EME78944.1| hypothetical protein MYCFIDRAFT_43692 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1149

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 341/1165 (29%), Positives = 576/1165 (49%), Gaps = 100/1165 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPML--DVPIYGRIA 63
            Y+   H+P+++ H+   +FTSP   +L++AK  R+EI   +P     +L     IYG++ 
Sbjct: 3    YLAPIHRPSSIRHALKLSFTSPDAEDLVVAKANRLEIWRASPGDTTLVLQHSKAIYGKVT 62

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGI 122
             L   RP     D LF+ T+RY +  L WD E  +L T ++M D++D+  R +  G    
Sbjct: 63   LLHKLRPATSQTDHLFVGTDRYNYFTLSWDGERQDLKTEKSMVDIADKAARDSQTGDRVH 122

Query: 123  IDPDCRLIGLHLYDGLFKVIPF-----------DNK-GQLKEAFNIRLEELQVLDIKFLY 170
            IDP  R + L +Y+G+  V+P            DN+ G+L +   +R+ EL V    FLY
Sbjct: 123  IDPTSRFMTLEVYEGVVNVLPIAHAGKGKRKAADNEIGELGDPIQVRIPELFVRSSCFLY 182

Query: 171  -------GCAKPTIVVLYQDNKDARHVKTYEVALKDK----------DFVEGPWSQNNLD 213
                   G   P   VLY+D+K+   +K  E+               +  +G     +L+
Sbjct: 183  RRDTGPRGKTDPMFAVLYEDSKNQVRIKIRELEYSPSLRPNEEPATAELEKGVDVTGSLE 242

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYL 269
             G+  +IP+P P  G+L++GE  I Y      K    +P    ++  A+ ++D    RY+
Sbjct: 243  MGSSFMIPLPAPTYGLLVVGETRITYVDEWEHKVQDSQPLEDATVFVAWCKLDE--QRYI 300

Query: 270  LGDHAGLLHLLVI-THEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D    L+LL++ T        L+I++LGETS AST+ YLD   V++GS  GDSQ+I++
Sbjct: 301  LADDYKKLYLLMVNTSPHGDYQSLEIDVLGETSRASTLVYLDEGRVFVGSHQGDSQVIQI 360

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDG 377
            + +       ++VL+ + N+ PI+DF V+D+  +           GQ ++VT SGA+ DG
Sbjct: 361  SPK------RIDVLQSFPNIAPILDFTVMDMGNRSLDAPVNEFSSGQARIVTGSGAFNDG 414

Query: 378  SLRIVRNGIGINEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            SLR VR+G+G+ ++ S+   G  I  ++SLR+S    +   L+VS +S T ++    + +
Sbjct: 415  SLRSVRSGVGLEDRGSLGDLGAPISSIFSLRTSAAAQYVDTLIVSHVSHTNVVVFTEDGD 474

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +E  +   GF  +  TLF  D    + VQVTS SV L  S    + + W++P G S+   
Sbjct: 475  IEARDSFRGFELKDATLFAGDLRDGRAVQVTSSSVLLTDSEGDMVTDRWQAPSGTSITAV 534

Query: 495  TANASQVLLATGGGHLVYLEIGDG---ILTEVKHAQLEYEISCLDINPIGENPSYSQIAA 551
             A+  ++L++  G  LV L++      +  E K    E ++SC+ +     +PS      
Sbjct: 535  AADGEKILVSLQGAVLVVLDLSASNIQVQAERKFGS-EEQVSCIAL-----SPSIPNACV 588

Query: 552  VGMWTDISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAF--EGISYLLCALGDGHLL 606
             G W D  V   SL DL     E +  E    +PRS+++     +  + L   L DG+++
Sbjct: 589  AGFWKDSKVSFLSLQDLQPTASERVAEEESLAVPRSLIVANILKDQPATLFVGLADGNVV 648

Query: 607  NFLLNMKTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLLYSNV 665
             + +       + RK + LGTQ         +    +VFA  + P++IY S+ +L+YS V
Sbjct: 649  TYSVTSAQQPFSARKCIILGTQQANFAALPRADGLQNVFATCEHPSLIYGSDGRLVYSAV 708

Query: 666  NLKEVSHMCPFNS-AAFPDSLAIAK-----EGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
              +  + +  F+S   +  ++AIA      E EL +  +D+ +  H++ + + E  RRI 
Sbjct: 709  TAENATCIASFDSFGDYAGAIAIATTDENGENELKLAVVDEERTTHVQDLFIHETVRRIA 768

Query: 720  HQEQSRTFAICSLKNQSCA--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
            +  + + F +  +K    A  EE   HF +L+D+  F+ + T+ L+  E    ++ C   
Sbjct: 769  YSAELKAFGLGCIKRTLSAGNEEVASHF-KLVDEVAFKELDTWALNEDELVECVIRCYLD 827

Query: 778  DDSN---VYYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNG 833
            D S      + VGTAY+  ++    KGRILV  I ED +++L+ E   +GA   L    G
Sbjct: 828  DGSGEEAERFVVGTAYLDDQDANNAKGRILVLEITEDRRIKLVTELAVRGACRCLAVCQG 887

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            +++AA+ + I +Y +  +   T  L  +  +      + +    + I V DLMKS+SLL 
Sbjct: 888  RIVAALVKTIVVYDFEYQTPSTPALTKKASYRTATAPIDICVTNNTIAVTDLMKSLSLLE 947

Query: 894  YKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 949
            +K     +   + E AR +   W +A   + ++ YL ++   NL  ++ +  G + E+R 
Sbjct: 948  FKAGRQGQPDTLIEIARHFETLWGTACARVSENTYLESDAEGNLIVLQHDINGFSQEDRR 1007

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 1009
            RL V  E+ LGE VNR R    +   P       P     T +G I V   +   +   L
Sbjct: 1008 RLRVTSEFLLGEMVNRIRP---ITVQPSPGAVVTPQAFLATTDGSIYVYCEIGKPRQDLL 1064

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFLDLSRTRMDEI 1066
             ++QT +  ++K  GG+   ++R F    + +  +    F+DG+LIE FLD+     +E+
Sbjct: 1065 MRMQTLMADMVKSPGGVRFAKFRGFKTLVRDMGEEGPVRFVDGELIERFLDMPEVLQNEV 1124

Query: 1067 SKTMN---VSVEELCKRVEELTRLH 1088
             K ++   V +E L   VE L R+H
Sbjct: 1125 VKGLDGTGVDLEGLRGMVEGLRRIH 1149


>gi|70992271|ref|XP_750984.1| UV-damaged DNA binding protein [Aspergillus fumigatus Af293]
 gi|66848617|gb|EAL88946.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
            Af293]
 gi|159124553|gb|EDP49671.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
            A1163]
          Length = 1140

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 351/1156 (30%), Positives = 572/1156 (49%), Gaps = 91/1156 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ H+   NF +P+E  L++AK  R+E +  TP GL  +    IY R+  L
Sbjct: 3    YVVPIHRASSIRHALKLNFMNPEEDCLVVAKSNRLEFYSPTPDGLDLVASCAIYARVTML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +  L WD+    + T R   D+SD   R +  G   +I
Sbjct: 63   ARLPAPANSPTDHLFVGTDRYTYFTLSWDSSEKRVRTERDYVDMSDPSSRESQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+G+  VIP                        G+L E    R+EEL V
Sbjct: 123  DPSGRFMTLEIYEGVIAVIPIIQLPSKKRGRAVALPSGPDAPRVGELGEPTTARIEELFV 182

Query: 164  LDIKFLY-GCAKPTIVVLYQDN-KDAR--------HVKTYEVALKDKDFVEGPWSQNNLD 213
                FL+     P + +LY+DN K  R        H  T   +  D  F E      +L+
Sbjct: 183  RSSAFLHVQEGLPRLALLYEDNQKKVRLRVRELQYHAATGSNSTADATFGEPADFTQDLE 242

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYL 269
             G+  LIPVP PL G+LI+GE +I Y  A+  + I  RP    +I  A+ +VD+   R+L
Sbjct: 243  LGSSHLIPVPAPLGGLLILGEMSIKYVDADNNEIIS-RPLDEATIFVAWEQVDS--QRWL 299

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L+++     +V   K++ LG TS AS + YL   ++++GS  GDSQ++++
Sbjct: 300  LADDYGRLFFLMLVLDSDSQVESWKLDHLGNTSRASVLVYLGGGILFLGSHQGDSQVLRI 359

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDG 377
            +  P      +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG
Sbjct: 360  SNGP------LEVVQTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVTGSGAFDDG 413

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            +LR VR+G+G+ E   + ++  I  +W L+  +   F   L+V+F+ ETR+   + + E+
Sbjct: 414  TLRSVRSGVGMEELGVLGDMDHITDLWGLQVGSSGDFLDTLLVTFVDETRVFRFSSDGEV 473

Query: 437  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE +   G      TL   +    +++QVT   V +       +  EW  P  + +  A+
Sbjct: 474  EEMDHFLGLSLSESTLLATNLPGGRILQVTEQRVLIAEIEGGMVIYEWTPPNQFIITAAS 533

Query: 496  ANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
            AN   ++L  GG  +  L I + + +   K    + +IS + +     +P+   IA    
Sbjct: 534  ANDDSIVLVAGGELVTVLNITNEVQVVTQKDFGADSQISGVTVP---SSPTGVCIAGFPQ 590

Query: 555  WTDISVRIFSLPDLNLI--TKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLL 610
               +SV    L DL+ +  T   + GE  PRSVL+     +    L  ++ DG ++ +  
Sbjct: 591  LAKVSV--LKLQDLSELHTTSVGMAGEAFPRSVLVANVLTDSPPTLFVSMADGSVITYSF 648

Query: 611  NMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE 669
            N     LT   K+ LG+ QP   +        +VFA  + P++IY S  +++YS VN + 
Sbjct: 649  NTNNFSLTGMTKLILGSEQPTFKKLPRGSGLFNVFATCENPSMIYGSEGRIIYSAVNSEG 708

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 729
             S +C FNS A+P+S+A+A   +L I  +D  +   I+++P+G   RR+ +    + F I
Sbjct: 709  ASRICHFNSEAYPESIAVATSHDLKIALVDKERTTQIQTLPIGATVRRVAYSPSEKAFGI 768

Query: 730  CSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--------DD 779
             +++ +     E  +  FV L D+  F  +  + L   E   S++   F         D+
Sbjct: 769  GTIERKLVDGTEIVKSRFV-LADEILFRRLDAFELRPEELVESVIRAEFPAGKGANDRDE 827

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAA 838
                + VGTAY+  E +E  +GRIL+F V++G KL  +AE   KGA  +L     K++AA
Sbjct: 828  VKDRFIVGTAYLDDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGDKIVAA 887

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + + + +YK +  + G   L+    +      + V   G+ I V DLMKS+ L+ YK  E
Sbjct: 888  LVKTVVVYKVINNNFGAMRLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSMCLVEYKEGE 947

Query: 899  GA----IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
                  + E AR +   W + V  +  D +L ++   NL  + +N+ G  ++++ RLEV 
Sbjct: 948  NGTPDTMTEVARHFQTVWATGVANIAPDTFLESDAEGNLIVLHRNTTGVEEDDKRRLEVT 1007

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            GE  LGE VNR R  ++      + V   P    GTV G I + A +  +   FL +LQ 
Sbjct: 1008 GEISLGEMVNRIRPVNIQQL---ASVAVTPRAFLGTVEGSIYLFAIINPDHQDFLMRLQA 1064

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NV 1072
             +   ++ VG +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  T+  +
Sbjct: 1065 TIAGKVELVGNIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVSTVGKM 1124

Query: 1073 SVEELCKRVEELTRLH 1088
            SV+E+   +E L RLH
Sbjct: 1125 SVDEVKGMIEALRRLH 1140


>gi|119471789|ref|XP_001258220.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
            181]
 gi|119406372|gb|EAW16323.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
            181]
          Length = 1140

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 353/1156 (30%), Positives = 575/1156 (49%), Gaps = 91/1156 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ H+   NF +P+E  L++AK  R+E +  TP GL  +    IY R+  L
Sbjct: 3    YVVPIHRASSIRHALKLNFMNPEEDCLVVAKSNRLEFYSPTPDGLDLVASCAIYARVTML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +  L WD+    + T R   D+SD   R +  G   +I
Sbjct: 63   ARLPAPANSPTDHLFVGTDRYTYFTLSWDSSEKRVRTERDYVDMSDPSSRESQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+G+  VIP                        G+L E    R+EEL V
Sbjct: 123  DPSGRFMTLEIYEGVIAVIPIIQLPSKKRGRAVALPSGPDAPRVGELGEPTTARIEELFV 182

Query: 164  LDIKFLY-GCAKPTIVVLYQDN-KDAR--------HVKTYEVALKDKDFVEGPWSQNNLD 213
                FL+     P + +LY+DN K  R        H  T   +  D  F E      +L+
Sbjct: 183  RSSAFLHVQEGLPRLALLYEDNQKKVRLRVRELQYHAATGSNSTADATFGEPADFTQDLE 242

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYL 269
             G+  LIPVP PL G+LI+GE +I Y  A+  + I  RP    +I  A+ +VD+   R+L
Sbjct: 243  LGSSHLIPVPAPLGGLLILGEMSIKYVDADNNEIIS-RPLDEATIFVAWEQVDS--RRWL 299

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L+++     +V   K++ LG TS AS + YL   V+++GS  GDSQ++++
Sbjct: 300  LADDYGRLFFLMLVLDSDSQVESWKLDHLGNTSRASVLVYLGGGVLFLGSHQGDSQVLRI 359

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDG 377
            +  P      +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG
Sbjct: 360  SNGP------LEVVQTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVTGSGAFDDG 413

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            +LR VR+G+G+ E   + +++ I  +W L+  +   F   L+V+F+ ETR+   + + E+
Sbjct: 414  TLRSVRSGVGMEELGVLGDMEHITDLWGLQVGSIGDFLDTLLVTFVDETRVFRFSSDGEV 473

Query: 437  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE +   G      TL   +    +++QVT   V +       +  EW  P    +  A+
Sbjct: 474  EEMDHFLGLSLSESTLLATNLPGGRILQVTEQRVLIAEVEGGMVIYEWTPPNQLIITAAS 533

Query: 496  ANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
            AN   ++L  GG  +  L I + + +   K    + +IS + +     +P+   IA    
Sbjct: 534  ANDDSIVLVAGGELVTVLNITNEVQIVTQKDFGADSQISGVTVP---SSPTGVCIAGFPQ 590

Query: 555  WTDISVRIFSLPDLNLI--TKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLL 610
               +SV    L DL+ +  T   L GE  PRSVL+     +    L  ++ DG ++ +  
Sbjct: 591  LAKVSV--LKLQDLSELHTTSVGLAGEAFPRSVLVANVLTDSPPTLFVSMADGSVITYSF 648

Query: 611  NMKTGELTDRKKVSLGTQPITLRTFSSK-NTTHVFAASDRPTVIYSSNKKLLYSNVNLKE 669
            N     LT   K+ LG++  T +         +VFA  + P++IY S  +++YS VN + 
Sbjct: 649  NTDDYSLTGMTKLILGSEQPTFKKLPRGIGLFNVFATCENPSMIYGSEGRIIYSAVNSEG 708

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 729
             S +C FNS A+P+S+A+A   +L I  +D  +   I+++P+G   RR+ +    + F I
Sbjct: 709  ASRICHFNSEAYPESIAVATSHDLKIALVDKERTTQIQTLPIGATVRRVAYSPSEKAFGI 768

Query: 730  CSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--------DD 779
             +++ +    AE  +  FV L D+  F  +  + L   E   S++   F         D+
Sbjct: 769  GTIERKLVDGAEIVKSRFV-LADEILFRRLDAFELRPEELVESVIRAEFPAGKGANDRDE 827

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAA 838
                + VGTAY+  E +E  +GRIL+F V++G KL  +AE   KGA  +L     K++AA
Sbjct: 828  VKDRFIVGTAYLDDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGDKIVAA 887

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + + + +Y+ +  + G   L+    +      + V   G+ I V DLMKS+ L+ YK  E
Sbjct: 888  LVKTVVVYRVINNNFGAMRLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSMCLVEYKEGE 947

Query: 899  GA----IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
                  + E AR +   W + V  +  D +L ++   NL  + +N+ G  ++++ RLEV 
Sbjct: 948  NGTPDTMTEVARHFQTVWATGVANIAPDTFLESDAEGNLIVLHRNTTGVEEDDKRRLEVT 1007

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            GE  LGE VNR R  + + +L  + V   P    GTV G I + A +  +   FL +LQ 
Sbjct: 1008 GEISLGEMVNRIRPVN-IQQL--ASVAVTPRAFLGTVEGSIYLFAIINPDHQDFLMRLQA 1064

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NV 1072
             +   ++ VG +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  T+  +
Sbjct: 1065 TIAGKVELVGNMPLNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVSTVGKM 1124

Query: 1073 SVEELCKRVEELTRLH 1088
            SV+E+   +E L RLH
Sbjct: 1125 SVDEVKGMIEALRRLH 1140


>gi|212539802|ref|XP_002150056.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei ATCC
            18224]
 gi|210067355|gb|EEA21447.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei ATCC
            18224]
          Length = 1139

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 345/1155 (29%), Positives = 580/1155 (50%), Gaps = 90/1155 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ ++V H+   NF  P+E  L++AK  R+E + +TP GL       +Y +++ L
Sbjct: 3    YVVPIHRASSVRHALKLNFLEPEEDCLVVAKGARLEFYSITPDGLALTTSRALYAKVSML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T++  +  L+WD+E   + T R+  D++D+  R   NG   +I
Sbjct: 63   ARLPAPANSTTDHLFVGTDQNTYFTLKWDSEKRRVRTERSYVDLADKASRACQNGDRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIP------------------FDNK-------GQLKEAFNIRL 158
            DP  + + L +++G+  V+P                  + N        G+L E    R+
Sbjct: 123  DPSGKYMTLEIFEGIITVLPIIQLHKKRGKPPVLKTSHYSNPDEPTPQIGELGEPMMTRI 182

Query: 159  EELQVLDIKFLY--GCAKPTIVVLYQDNKDARHVKTYEVALK---DKDFVEGPWSQNNLD 213
            +EL V    FL+    A P + +L++DN+    +K  E++ +   +  F E       LD
Sbjct: 183  DELMVRSSAFLHVESKAHPRLALLHEDNQRKVKLKIRELSFEASAEPVFQETEDFTEELD 242

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIRPSITKAYGRVDADGSRYLLG 271
             GA  LIPVP PL G+L++GE  I Y   + N   + P+  + T     V  DG R+LL 
Sbjct: 243  LGASHLIPVPAPLGGLLVLGETCIKYIDDAKNETISNPLDEA-TIFVAWVQVDGQRWLLA 301

Query: 272  DHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL 330
            D  G L  L+++   + +V G K++ LGE S AS + YL   + +IGS  GDSQ+I++  
Sbjct: 302  DDYGRLFFLMLVLDSQNEVEGWKLDYLGEASRASVLIYLGAGMTFIGSHQGDSQVIRI-- 359

Query: 331  QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSL 379
               ++GS+ E+++   N+ PI+DF ++DL  +           GQ ++VT SGA+ DG+L
Sbjct: 360  ---SEGSF-EIIQTISNIAPILDFTIMDLGAREGENYTHEFSSGQARIVTGSGAFNDGTL 415

Query: 380  RIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            R VR+G+G++E   + E++ I  MW+L+ S+   F   LVV+F++ETR+   + + E+EE
Sbjct: 416  RSVRSGVGMDELGVLGEMEHITDMWALQISSPGDFSDTLVVTFVNETRVFRFSSDGEVEE 475

Query: 439  -TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
              E  G      TL   +    +++ VT   V +  + S  + ++W SP G+++     N
Sbjct: 476  LDEFLGLNLAENTLLSSNLPGGRIIHVTESGVSIADTDSGMVTSKW-SPDGHTITSVACN 534

Query: 498  ASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
              ++++ TGG  +  L+I GD  +   K    + ++S + I P     + SQ+       
Sbjct: 535  DERLVVVTGGQIIATLDITGDLKVLSQKDFGKDNQVSGVTIPP-----APSQVCIAAFPQ 589

Query: 557  DISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNM 612
            +  V +  L     +  + LG   E  PR+VLL     +  S L  ++ DG ++ F  + 
Sbjct: 590  NALVAVLDLHRFEELHSQSLGVASEAFPRTVLLAEILADSSSTLFVSMADGSVVTFSYDA 649

Query: 613  KTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
            ++  LT   K+ LG++  T +     +  + VF   + P++IY+S  +++YS VN +  S
Sbjct: 650  ESHSLTGTNKLILGSEQPTFKKLPRGDGLYNVFTTCEHPSLIYASEGRIIYSAVNSEGAS 709

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 731
             +C FN+ A+PD++A+A   +L I  +D  +   I+++P+G   RR+ +    + F I +
Sbjct: 710  RVCHFNTEAYPDAIAVATSRDLKIALVDKERTTQIQTLPIGATVRRVAYSPTEKAFGIGT 769

Query: 732  LKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY------ 783
            +K   +  AE  E  FV L D+  F  + ++ L   E   S++        + Y      
Sbjct: 770  IKRRLEDGAEIVESQFV-LADEIMFRKLDSFDLKPDELVESVIRAQMVVGKDRYDEPIYK 828

Query: 784  --YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
              + VGTAY+  E  E  +GRIL+F V+   KL L  E   KGA  +L      ++AA+ 
Sbjct: 829  DRFIVGTAYLDDETAESIRGRILLFEVDSNRKLSLFLEHPVKGACRALAMMGDYIVAALV 888

Query: 841  QKIQLYKWMLR-DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            + + +++   +   G   LQ    +      + +      IVV DLMKSIS++     + 
Sbjct: 889  KTVVIFEVTGQPQTGKYSLQKAAVYRTSTAPVDIAVTDKTIVVADLMKSISIVESNKTDA 948

Query: 900  ---AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 956
                 +E AR +   W +AV  +  + +L ++   NL  +R+N +G T+E+R RLEV  E
Sbjct: 949  LTMEAKEVARHFATVWTTAVADIGSNQWLVSDAEGNLIVLRRNVDGMTEEDRRRLEVTSE 1008

Query: 957  YHLGEFVNRFRHGSLVMRLPD-SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
              LGE VNR R     + +P  S +   P    GTV G I + A +  E   FL +LQT 
Sbjct: 1009 LLLGEMVNRIRP----VNIPQTSTMAVTPKAFLGTVEGSIYLFALINPEHQDFLMRLQTA 1064

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNV-S 1073
            +   +   G +   ++R+F +  +  +    F+DG+LIE FLD  R   +EI   +    
Sbjct: 1065 ISAYVDSPGLMPFNKFRAFRSTVREAEEPFRFVDGELIERFLDCDRAVQEEILGVVGSGD 1124

Query: 1074 VEELCKRVEELTRLH 1088
            +E + K +E L RLH
Sbjct: 1125 LESVQKMIEALRRLH 1139


>gi|326426696|gb|EGD72266.1| hypothetical protein PTSG_00286 [Salpingoeca sp. ATCC 50818]
          Length = 1104

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 318/1117 (28%), Positives = 569/1117 (50%), Gaps = 51/1117 (4%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+  A KPT VT +   N        L++AK T +++  +  QGL+P+ D P+YG++A +
Sbjct: 5    YLTYAVKPTAVTEALTVNLFEADSPCLVLAKSTHLQVFKMGEQGLEPIHDYPVYGKVACI 64

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
             ++  P  +  D L + T+  +F VL ++  + +L T   G++ +    P + G +  +D
Sbjct: 65   RKMTFPQMKGLDSLLVMTDDMRFFVLTFNEHTKKLETHTNGNLLNPSSFPMETGPLVAVD 124

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
            PDCR+I + +Y GL K++        +EA   RL+  QVL +  L+GCA+PT+ VL Q  
Sbjct: 125  PDCRVIVMAMYPGLVKILRIHGCKFEEEASEARLDADQVLSMAMLHGCAEPTLAVLCQ-R 183

Query: 185  KDARHVKTYEVALKDKDF-VEGPWS---QNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
             D R VK   V  +++   V   W    +  + + A  L PVP    G L+ G + +VY 
Sbjct: 184  ADQRFVKLMRVTSRNELVEVSSVWKTRLEGAVPDSAHFLHPVPNTSEGCLVFGADAVVYA 243

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDH-AGLLHLLVITHEKEKVTGLKIELLGE 299
             AN +KA  I   + +A   VD  G+R+L+GD   G L LLV+  E+++V  +  E  GE
Sbjct: 244  DANGYKAASIPEMMVQAVADVDDSGARFLIGDSLRGGLALLVLEREEDQVQQIVYEPFGE 303

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            T   ST++YLDN+VV++GS  GDSQ++KL    D +   + VL+ + N+G ++D C +  
Sbjct: 304  TVAPSTLAYLDNSVVFVGSVVGDSQVVKLETDDDNQNKII-VLDTHENIGSVLDMCSLPQ 362

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP----FDT 415
               G+ ++VT SGA KDGSLR+++ G+ I   A+V+L  ++ +W L   + +      ++
Sbjct: 363  ASFGETRLVTASGAGKDGSLRVIQRGVNITSSATVQLDDLQRVWVLTKPSGEAEAATEES 422

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGF----CSQTQTLFCHDAIYNQLVQVTSGSVRL 471
            FL +SF      L      + E  E+ GF          L C +   NQ + VT   V L
Sbjct: 423  FLALSFAGGLAFL------QFEGEELCGFEVPSAPSDPALLCSNVAENQWLFVTEDEVVL 476

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            V + +     EWK+  G ++  A A + + L+ + G  L+  EI  G LT+ K   LE+E
Sbjct: 477  VCAETLARVAEWKAAEGQAIG-ACACSEKQLVVSSGRQLLIFEIAKGKLTQTKDTTLEHE 535

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            +SCLDI P+ ++ +   +A  G W ++  +++ LP + + +       +I  S  +    
Sbjct: 536  LSCLDILPVNDDGTSVMVA--GTW-NVEAKVYHLPSMRVASSAPFKAGVIATSCAITRLG 592

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
              +     +GDG ++ ++    +  +T+++ V  G QP++L +    +   V A S+   
Sbjct: 593  DQNVAFFGMGDGSVVRYIFAEGSWHMTNQRHVHAGKQPVSLVSCKFASGPAVVALSNTSL 652

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            + Y+ + ++ +S +N   ++ + P ++ A+PDSL  +    L IG I  +  LHI  + L
Sbjct: 653  LFYADSGRVTFSTLNEANLTCVAPLSTPAYPDSLVFSTPASLGIGQIGRMNNLHINKVAL 712

Query: 712  GEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
            G  P  +     + ++ +  + +    +      +R+ D  T E ++++ L   E    +
Sbjct: 713  GFSPVSLTTISANPSYVVV-VGHVDQEDGGIASAIRVFDGTTLEMVASHELPAPEAVNCV 771

Query: 772  LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNA 830
            +   F DD+  Y+ +GTA+V P E +P++GRIL+  +E+ K + ++ E E  G+VY L  
Sbjct: 772  IQHKFKDDNTEYFIIGTAFVDPTETQPSRGRILISKLENKKEIAIVHECEAAGSVYCLTK 831

Query: 831  FNGK----LLAAINQKIQLYKW-MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 885
              GK    L+A IN ++  +K+     D  ++L++  G+      + + +  D ++VGD+
Sbjct: 832  MCGKDTDDLVAGINNQVVHFKYDATGQDAAKKLRAVSGNQNFGAVVSLDSCDDIVLVGDM 891

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 945
            + ++   + +  +  ++  A    ANW+S+  ++++ ++L A +  +L   ++  E  + 
Sbjct: 892  LNAV--FVMQKAQDKLQLVAGSQTANWVSSCALVNETVFLVASHAHSLSVCQREFEPGST 949

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSL-VMRLPDSDVGQIPT-VIFGTVNGVIGVIASLPH 1003
             +   L    E +LGE V  F   +L      DS +    T  +FGT+ G +  +  L  
Sbjct: 950  MQ--TLNAKFEIYLGETVTSFVRAALGSAAAVDSSMPLRNTFFVFGTMGGGLACLLPLTP 1007

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN--FLDGDLIESFLDLSRT 1061
             Q   L  L+  + + I G+GGL+H ++R+  +E++     N   +DGDL+E+FL L   
Sbjct: 1008 PQTELLTALECRMEEKIGGLGGLDHREFRTARDEQRMAQQVNPRLVDGDLVETFLQLPEE 1067

Query: 1062 RMDEISKTMN----------VSVEELCKRVEELTRLH 1088
               E+   M+          V+ E     +E + RLH
Sbjct: 1068 EQKELVAGMSLMGEDGRPYVVTAEVAKAALEAMARLH 1104


>gi|317031116|ref|XP_001392900.2| UV-damaged DNA binding protein [Aspergillus niger CBS 513.88]
          Length = 1124

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 347/1156 (30%), Positives = 582/1156 (50%), Gaps = 107/1156 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ ++   +F + +E  L++AK  R+EI+ LTP+GL       ++ ++  L
Sbjct: 3    YVVPIHRASSIRNALKLHFMNAEEEALVVAKANRLEIYSLTPEGLNLAASCSLFAKVTML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +C L WD E +++ T R   D+SD   R    G   +I
Sbjct: 63   ARLPAPANSPTDHLFVGTDRYTYCTLSWDGERNQIRTERNYVDISDPSSREAQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+G+  V+P                        G+L E    R++EL  
Sbjct: 123  DPSGRFMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDEL-- 180

Query: 164  LDIKFLYGCAKPTIVVLYQDNKDARHVKT----YEVALK----DKDFVEG--PWSQNNLD 213
                         + +LY+DN+    +K     Y  A      D  F E    +SQ  LD
Sbjct: 181  -------------LALLYEDNQKKVRLKVRALHYSAATASTGADAAFEESLDGFSQE-LD 226

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYL 269
             GA  LIPVP PL G+L++GE +I Y   ++ + +  RP    +I  A+ +VD+   R+L
Sbjct: 227  LGASHLIPVPAPLGGLLVLGETSIKYVDTDSNEIVS-RPLDEATIFVAWEQVDS--QRWL 283

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L+++     +V   K++ LG T+ AS + YL   V+++GS  GDSQ++++
Sbjct: 284  LADDYGRLFFLMLVLDSNNQVQSWKLDHLGNTARASVLIYLGGGVIFVGSHQGDSQVLRI 343

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDG 377
                   GS +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG
Sbjct: 344  -----GNGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDG 397

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            +LR VR+G+G+ E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E+
Sbjct: 398  TLRSVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEV 457

Query: 437  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE +   G      TL   +    +++QVT   V +       + NEW  P    +  A+
Sbjct: 458  EELDSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSAS 517

Query: 496  ANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
            AN   ++L +GG  +  L+I + + +   K    + +IS + + P+    S + +  VG 
Sbjct: 518  ANNDSIVLVSGGQLMTVLDINNDVRVISQKDFGADSQISGVTV-PL----SSAGVCIVGF 572

Query: 555  WTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLL 610
                 V +  L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ +  
Sbjct: 573  PQLAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYSF 632

Query: 611  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKE 669
            + +   LT   ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN + 
Sbjct: 633  DARNYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEG 692

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 729
             S +C FNS A+P S+A+A   +L I  +D  +   I+++P+GE  RR+ +    + F I
Sbjct: 693  ASRVCHFNSEAYPGSIAVATRHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFGI 752

Query: 730  CSL--KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSNV 782
             ++  K +  AE  +  FV L D+  F  +  + L   E   S++   FS     +  +V
Sbjct: 753  GTIERKLKDGAEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDV 811

Query: 783  Y---YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAA 838
            +   + VGTAY+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++AA
Sbjct: 812  FKDRFVVGTAYLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAA 871

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + + + +Y  +  D G  +L+    +      + V   G+ I V DLMKS+ L+ Y   E
Sbjct: 872  LVKTVVIYGVVNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGE 931

Query: 899  G----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
                 ++ E AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV 
Sbjct: 932  NGSPDSLTEVARHFQTVWATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVT 991

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            GE  LGE VNR R  + + +L  + V   P    GTV G I + A +  E   FL +LQ 
Sbjct: 992  GEISLGEMVNRIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQA 1048

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-V 1072
             +   ++ +G +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  ++  +
Sbjct: 1049 TMAGKVESLGNIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVDSVGMM 1108

Query: 1073 SVEELCKRVEELTRLH 1088
            +V+E+   +E L RLH
Sbjct: 1109 NVDEVKIMIEALRRLH 1124


>gi|121699866|ref|XP_001268198.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
            1]
 gi|119396340|gb|EAW06772.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
            1]
          Length = 1140

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 350/1156 (30%), Positives = 577/1156 (49%), Gaps = 91/1156 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ H+   NF +P+E  L++AK  R+E ++ TP GL  +     Y R+  L
Sbjct: 3    YVVPIHRASSIRHALKLNFVNPEEDCLVVAKSNRLEFYVPTPDGLNLVTSCAAYARVTML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +  L WD+  +++ T R   D+SD   R +  G   +I
Sbjct: 63   ARLPAPANSPTDHLFVGTDRYTYFTLSWDSSKNQVRTEREYVDISDPSSRESQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+G+  V+P                        G+L E    R+EEL V
Sbjct: 123  DPSGRFMTLEIYEGVIAVVPIIQLPSKKRGRNVALPSGPDAPRVGELGEPATARIEELFV 182

Query: 164  LDIKFLY-GCAKPTIVVLYQDN-KDAR--------HVKTYEVALKDKDFVEGPWSQNNLD 213
                FL+     P + +LY+DN K  R        H  T    + D  F E       L+
Sbjct: 183  RSSAFLHVQEGLPRLALLYEDNQKKVRLRVRELQYHAATGSTNIADATFGEPADFTQELE 242

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYL 269
             G+  LIPVP PL G+LI+GE +I Y  A+  + I  RP    +I  A+ +VD+   R+L
Sbjct: 243  LGSSHLIPVPAPLGGLLILGETSIKYVDADNNEIIS-RPLDEATIFVAWEQVDS--QRWL 299

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L+++     +V   K++LLG+TS AS + YL   V+++GS  GDSQ++++
Sbjct: 300  LADDYGRLFFLMLVLDSDNQVESWKLDLLGKTSRASVLVYLGGGVLFLGSHQGDSQVLRI 359

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDG 377
                 + GS V+V++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG
Sbjct: 360  -----SNGS-VDVVQTLPNIAPILDFTIMDLGSRTSESQTHEFSSGQARIVTGSGAFDDG 413

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            +LR VR+G+G+ E   + E+  I  +W L+  +   F   L+V+F+ ETR+   + + E+
Sbjct: 414  TLRSVRSGVGMEELGVLGEMDHITDLWGLQVGSKGDFLDILLVTFVDETRVFHFSPDGEV 473

Query: 437  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE +   G      TL   +    +++QVT   V +       +  EW  P    +  A+
Sbjct: 474  EEMDHFLGLSLSENTLLAANLPGGRILQVTERRVLIAEVEGGMVTYEWTPPNQLIITAAS 533

Query: 496  ANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
             N   ++L  GG  +  L+IG+ + L   K      +IS + +     +P+   IA    
Sbjct: 534  TNNDMIVLVAGGELVTVLDIGNEVRLVTQKDFGANSQISGVTVP---ASPTGVFIAGFPQ 590

Query: 555  WTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLL 610
               +SV    L DL  +    +G  GE  PRSVL+     +    L  ++ DG ++ +  
Sbjct: 591  LAKVSV--LKLQDLAEVQSTSVGPAGEAFPRSVLVADVLSDSPPTLFISMADGSVITYSF 648

Query: 611  NMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKE 669
            N     LT   K+ LG++  T +     +   +VFA  + P++IY S  +++YS VN + 
Sbjct: 649  NPDDVSLTGMTKLILGSEQPTFKKLPRGDGLFNVFATCENPSMIYGSEGRIIYSAVNSEG 708

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 729
             S +C  NS A+P S+A+A   +L I  +D  +   I+++P+G   RR+ +    + F I
Sbjct: 709  ASRICHLNSEAYPGSIAVATLHDLKIALVDKERTTQIQTLPIGATVRRVAYSPSEKAFGI 768

Query: 730  CSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF---SDDSNVY- 783
             +++ +    AE  +  F+ L D+  F  +  + L   E   S++   F    D+ N   
Sbjct: 769  GTIERKLVDGAEIVKSEFM-LADEILFRRLDAFELRPEELVESVIRAEFPVGKDEKNGAT 827

Query: 784  ----YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAA 838
                + VGTA++  E +E  +GRIL+F V++G KL  +AE   KGA  +L     +++AA
Sbjct: 828  VKDRFIVGTAFLDDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGNRIVAA 887

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + + + +YK +  + G  +L+    +      + V   G+ I V DLMKS+ L+ YK  E
Sbjct: 888  LVKTVVVYKAVSNNFGAMKLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSVCLVEYKEGE 947

Query: 899  GAIE----ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
              +     E AR +   W + V  +  D +L ++   NL  + +N+ G  ++++ RLEV 
Sbjct: 948  DGLPDTLTEVARHFQTVWATGVACIAQDTFLESDAEGNLIILCRNTTGVEEDDKRRLEVT 1007

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            GE  LGE VNR R  + + +L  + V   P     TV G I + A +  +   FL +LQ 
Sbjct: 1008 GEISLGEMVNRIRPVN-IQQL--TSVAVTPRAFLATVEGSIYLFAMINPDHQDFLMRLQA 1064

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI-SKTMNV 1072
             +   ++ VG +   ++R F++  ++  +   F+DG+LIE FL    +  +EI S    +
Sbjct: 1065 TIAGKVELVGNMPFNEFRGFHSMVREAQEPYRFVDGELIERFLACEPSVQEEIVSIVGKM 1124

Query: 1073 SVEELCKRVEELTRLH 1088
            +V+E+   +E L RLH
Sbjct: 1125 TVDEVKSMIEALRRLH 1140


>gi|115397303|ref|XP_001214243.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192434|gb|EAU34134.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1140

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 346/1158 (29%), Positives = 576/1158 (49%), Gaps = 93/1158 (8%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y+V  H+ +++ H+    F +P+E  L++AK  R+E++ LTP GL       +Y R+  
Sbjct: 2    SYIVPIHRASSIRHALKLQFMNPEEECLVVAKANRLEVYTLTPDGLSLAASCTLYARVTM 61

Query: 65   L-ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGI 122
            L  L  P     D LF+ T+RY +C L WD+  +++ T R   DVSD   R +  G   +
Sbjct: 62   LARLPAPANSPTDHLFVGTDRYTYCTLSWDSSQNQIRTERNYVDVSDPSSRESQTGNRCL 121

Query: 123  IDPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQ 162
            IDP  R + L +Y+GL  VIP                        G+L E    R++EL 
Sbjct: 122  IDPSGRFMTLEVYEGLVAVIPIVQLPGKKRGRAPAMPSGPDAPQVGELGELTTARIDELF 181

Query: 163  VLDIKFLY-GCAKPTIVVLYQDNKDARHVKTYEVAL--------KDKDFVEGPWSQNNLD 213
            V    FL+     P + +LY+DN+    +K  E+           D    +       LD
Sbjct: 182  VRSSAFLHVQSGLPRLALLYEDNQKKVRLKVRELQYTAATSSSGADATLADLADFAQELD 241

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDADGSRYLL 270
             GA  LIPVP PL G+LI+GE +I Y   +  + +       +I  A+ +VD+   R+LL
Sbjct: 242  LGASHLIPVPAPLGGLLILGETSIKYVDDDNNEIVSRLLDEATIFVAWEQVDS--QRWLL 299

Query: 271  GDHAGLLHLLVITHEKE-KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN 329
             D  G L  L++  + E +V G +++ LG TS AST+ YL   V+++GS  GDSQ++++ 
Sbjct: 300  ADDYGRLFFLMLVLDSENQVQGWQLDHLGNTSRASTLVYLGGGVIFVGSHQGDSQVLRV- 358

Query: 330  LQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGS 378
                  GS+ E+++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+
Sbjct: 359  ----GDGSF-EIIQTLPNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGT 413

Query: 379  LRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
            LR VR+G+G+ E   + E++ I  +W L+      F   L+V+FI ETR+   + + E+E
Sbjct: 414  LRSVRSGVGMEELGVLGEMEHITDLWGLQFKAKGDFLDTLLVTFIDETRVFHFSSDGEVE 473

Query: 438  E-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 496
            E  +  G      TL   +    +++QVT   V +    S  +  EW       +  A+A
Sbjct: 474  ELDQFLGLSLSENTLLAANLPGGRILQVTERRVLIADMESEMVTYEWTPSDQLIITSASA 533

Query: 497  NASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDI--NPIGENPSYSQIAAVG 553
            N   V+L  GG  +   +I + + +   K+   + +IS + +  +P G       +  VG
Sbjct: 534  NEDSVVLVAGGELMTVFDIRNNVQIVTQKNFGADSQISGVTVPSSPTG-------VCIVG 586

Query: 554  MWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLC--AFEGISYLLCALGDGHLLNFL 609
                  V +  L DL  +    LG  GE  PRSVL+     +    +  ++ DG ++ + 
Sbjct: 587  FPQSAKVSVLKLQDLTELHATSLGPEGEAFPRSVLVANVLVDSPPTIFISMADGSVITYS 646

Query: 610  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLK 668
             N     LT   K+ LG++  T +     +  + VFA  + P++IY S  +++YS VN +
Sbjct: 647  FNANDYSLTGMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSE 706

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFA 728
              S +C FNS A+P+S+A+A   EL I  +D  +   I+++P+G   RR+ +    + F 
Sbjct: 707  GASRVCHFNSEAYPESIAVATSHELKIALVDKERTTQIQTLPMGATVRRVAYSPSEKAFG 766

Query: 729  ICSL--KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--------D 778
            I ++  K +  AE  +  FV L D+  F  +  + L + E   S++   F         D
Sbjct: 767  IGTIERKLEEGAEIVKSQFV-LADEILFRRLDAFDLRSEELVESVIRAEFPVGKDEKGRD 825

Query: 779  DSNVYYCVGTAYVLPEEN-EPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLL 836
                 + VGTAY+  +E+ +  +GRIL+F V++G KL  +AE   KGA  +L     K++
Sbjct: 826  MFKDRFVVGTAYLDEDEDRDSIRGRILMFEVDNGRKLTKVAELAVKGACRALAMLGDKVV 885

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-K 895
            AA+ + + +YK    + G  +L+    +      + +    + I V DLMKS  L+ Y +
Sbjct: 886  AALVKTVVIYKVTGNNFGAMKLEKLASYRTSTAPVDITVTDNVIAVSDLMKSSCLVEYIE 945

Query: 896  HEEG---AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 952
             E+G   +++E AR +   W + +  +    YL ++   NL  +R+N  G  ++++ RLE
Sbjct: 946  GEDGLPDSLKEVARHFQTVWATGIACIAPHTYLESDAEGNLIILRRNLSGVEEDDKRRLE 1005

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
            V GE  LGE VNR R  ++      + V   P    GTV G I + A +  E   FL +L
Sbjct: 1006 VTGEISLGEMVNRIRPVNIQQL---ASVTVTPRAFLGTVEGSIYLYAIINPEHQDFLMRL 1062

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
            Q  +   I+ +G +   ++R F +  ++  +   F+DG+LIE FL    +  ++I  ++ 
Sbjct: 1063 QATMAGKIESLGDMPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSVQEDIVNSVG 1122

Query: 1072 -VSVEELCKRVEELTRLH 1088
             ++V ++   +E L RLH
Sbjct: 1123 MMNVHDVKVMIEALRRLH 1140


>gi|440639387|gb|ELR09306.1| hypothetical protein GMDG_03874 [Geomyces destructans 20631-21]
          Length = 1138

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 358/1156 (30%), Positives = 581/1156 (50%), Gaps = 91/1156 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YVV  H+P++V H+   N   P    L++AK  R+EI   TP GLQ      ++ RI  
Sbjct: 2    SYVVPIHRPSSVRHALSLNLLDPDSTCLVVAKSNRLEIWTSTPTGLQLAHTRTLHARITM 61

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            L   RP       LF+ T R  +  L WDA +  L T  A  D S++  R    G+   +
Sbjct: 62   LAAIRPPTSCTAHLFVGTTRAHYFTLAWDAATRRLETVHAFVDASEKHMRDAAGGERCAV 121

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFN-------IRLEELQVLDIKFLYG-CAKP 175
            DP  R + L L++G+   +      ++  A +       IR+ EL V    FL+     P
Sbjct: 122  DPSGRQLCLSLFEGVLSFVKVMKPRKVAAAGSYLDDPEQIRITELFVRATVFLHTESTSP 181

Query: 176  TIVVLYQDNKDARHVKTYEVA-----LKDKDFVEGPWSQNNLDNGADLLIPVP------- 223
             + +LYQD +D   + TY V          D  +    +  ++ GA  LIPVP       
Sbjct: 182  KVALLYQDGRDRVGLATYRVTDGRGQYGGFDPRKAREDELGVEVGASHLIPVPKGEGVQR 241

Query: 224  -----------PPLCGVLIIGEETIVYC---SANAFKAIPIRPSITKAYGRVDADGSRYL 269
                         L GV+++GE  ++Y    S    + +    SI  A+     DG RYL
Sbjct: 242  RYVVRNNASLKAQLGGVIVVGETRMLYLDDESKATVEHVLDEASIFVAW--TAYDGLRYL 299

Query: 270  LGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN 329
            LGD  G LHLL +  + E VTG+ I+     S  ST+  L++ +++IGS  GDSQ++KL+
Sbjct: 300  LGDEYGWLHLLTLVVDAEVVTGMTIKKFVRISRPSTMVCLEDDLLFIGSHDGDSQVLKLD 359

Query: 330  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGS 378
            L  DAK    EV++   N+ PIVDF V+D+  +           GQ ++VT SGA+++GS
Sbjct: 360  L--DAK--VAEVVQTLDNIAPIVDFTVMDMGSRSEEARANEFSSGQARIVTGSGAFQEGS 415

Query: 379  LRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN-LEDEL 436
            LR VR+G+G+ +   + E+  IKG+++L+++  +  DT LV+SF +ETR+   +   +  
Sbjct: 416  LRSVRSGVGLEDIGQLGEMDNIKGLYTLQTNNSEFHDT-LVISFSTETRVFRFDSEGEVE 474

Query: 437  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 496
            E  E  G   +  TL   +    +++Q+T     L+ S S      W+  PG  +  A+ 
Sbjct: 475  EVEEFLGLSFEEHTLLAANVSNGRILQITPSKALLIDSESGVAVASWQPAPGEIITAAST 534

Query: 497  NASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYSQIAAVGM 554
            N    LL+  G  L+ L + D  L+E+         +++C+D+ P  E P    I  VG+
Sbjct: 535  NEDYALLSADGKSLISLNL-DNDLSEIARQDFGDTDQVACVDV-PNTETP----IGLVGL 588

Query: 555  WTDISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAFEGISY---LLCALGDGHLLNF 608
            W   SV I  L  L+ I  + L  +    +PRS++L      ++   LL A+ DG + ++
Sbjct: 589  WQSGSVSIIDLRTLHPIQGDTLRNDDTAAVPRSMVLAQILPKTFGPTLLVAMSDGVVHSY 648

Query: 609  LLNMKTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 667
             +   T  LT+RK V LGTQ   LR    +    +VFA  +  ++IYSS  +++YS V  
Sbjct: 649  SVTPCTFALTNRKSVVLGTQQANLRVLPRAGGLMNVFATCEHSSLIYSSEGRIIYSAVTA 708

Query: 668  KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTF 727
            ++ + +CPFN+AA+PD++ +A   E+ I  ID  ++ H+R++P+GE  RR+ +    + F
Sbjct: 709  EDATFICPFNAAAYPDAIVVATASEIKISQIDTERRTHVRTLPMGETVRRVTYSPSEKVF 768

Query: 728  AICSLKNQSC-AEESEMHFVRLLDDQTF-EFISTYPLDTFEYGCSILSCSFSDDSNVY-- 783
             + ++K +    EE      RL+D+  F E    + L T +    + +   +   N Y  
Sbjct: 769  GLGAIKRELIDGEEVIESSFRLVDEIVFSELGKPFQLGTSQGEELVEAVIRAPLPNTYGT 828

Query: 784  ----YCVGTAYVLPEENEPTKGRILVFIVEDGKLQL-IAEKETKGAVYSLNAFNGKLLAA 838
                + VGT+++        +GRILVF V+  +    IAE + KGA   L   +GK++AA
Sbjct: 829  PQERFIVGTSFLDDNPGLSYRGRILVFGVDSSRNPYKIAEYKVKGACRCLGVIDGKIVAA 888

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH-- 896
            + + I ++++      +  ++    +      + +   G+ I V DLMKS+SL+ Y+   
Sbjct: 889  LVKTIVVFEYTELSGTSARIEKVASYRTSTCPVDLAIEGNTIAVADLMKSVSLVEYRAGT 948

Query: 897  --EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
              E   + E AR + + W +AV  +D+  +L A+ + NL  +R+N    T E+R ++EV 
Sbjct: 949  SGEAPTLVEVARHFQSVWATAVAHVDEG-WLEADADGNLIVLRRNEAAVTFEDRKKMEVT 1007

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQ-IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
            GE+HLGE VNR R     +R+  S+    +P     T  G + +  S+       L +LQ
Sbjct: 1008 GEFHLGEQVNRIRK----IRVDASEGATVVPRAFLATTEGSLFLYGSVAPASQDLLLRLQ 1063

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
              L + ++  G +    +RSF N E++T +   F+DG+LIE FLDL   R + + K +  
Sbjct: 1064 QRLAENVETPGNIPFTTYRSFRNAERETEEPYRFIDGELIERFLDLDEERQEVVCKGL-A 1122

Query: 1073 SVEELCKRVEELTRLH 1088
             VEE+   VEEL R+H
Sbjct: 1123 KVEEVRDLVEELRRMH 1138


>gi|169773185|ref|XP_001821061.1| UV-damaged DNA binding protein [Aspergillus oryzae RIB40]
 gi|83768922|dbj|BAE59059.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1139

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 354/1162 (30%), Positives = 582/1162 (50%), Gaps = 104/1162 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  HK ++V H+    F +P+E +L++AK  R+EI+ LTP GL       +Y +++ L
Sbjct: 3    YVVPIHKASSVRHALKLQFLNPEEESLVVAKANRLEIYTLTPDGLNLAASCTLYAKVSML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +C L WD+  + + T R   D++D   R +  G   +I
Sbjct: 63   ARLPAPAHSPTDHLFVGTDRYTYCTLSWDSAQNRIRTERNYVDIADPSSRESQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+GL  V+P                        G+L E    R++EL V
Sbjct: 123  DPSGRFMTLEVYEGLVAVVPIVQLPARKRGRAPAVPTGPDAPKVGELGELTTARIDELFV 182

Query: 164  LDIKFLY-GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQN------------ 210
                FL+     P + +LY+DN+     K   + +++ ++     S +            
Sbjct: 183  RSSAFLHVQSGLPRLALLYEDNQ-----KKVRLMVRELNYTSATASTSADATLTHIADFA 237

Query: 211  -NLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADG 265
              LD GA  LIPVP PL G+LI+GE +I Y   +  + I  RP    +I  A+  VD+  
Sbjct: 238  QELDLGASHLIPVPAPLGGLLILGETSIKYVDDDNNEIIS-RPLDEATIFVAWEGVDS-- 294

Query: 266  SRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
             R+LL D  G L  L+++     +V G K++ LG TS AS + YL   +V++GS  GDSQ
Sbjct: 295  QRWLLADDYGRLFFLMLVLDSDNQVQGWKLDHLGNTSRASALVYLGGGIVFVGSHQGDSQ 354

Query: 325  LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGA 373
            ++++       GS+ E+++   N+ PI+DF ++DL     E Q      GQ ++VT SGA
Sbjct: 355  VLRI-----GNGSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGA 408

Query: 374  YKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLR-SSTDDPFDTFLVVSFISETRILAMN 431
            + DG+LR VR+G+G+ E   + +++ I  +W L+  +  D  DT L+V+FI ETR+   +
Sbjct: 409  FDDGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDT-LLVTFIDETRVFHFS 467

Query: 432  LEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 490
             + E+EE +   G      TL   +    +++QVT   V +       +  EW  P    
Sbjct: 468  PDGEVEELDHFLGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGGMVVYEWTPPNELV 527

Query: 491  VNVATANASQVLLATGGGHLVYLEIGD--GILTEVKHAQLEYEISCLDINPIGENPSYSQ 548
            +  A+AN   ++L  GG  +  L+IG    ++TE K    + ++S + +       S ++
Sbjct: 528  ITAASANDDSLVLVIGGELMTVLDIGTEAQVITEKKFGA-DSQVSGVTVPA-----SPTE 581

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAFEGIS--YLLCALGDGH 604
            +  VG      V +  L DL  +    LG  GE  PRSVL+      S   L  ++ DG 
Sbjct: 582  VCVVGFPQLAKVSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSPPTLFISMADGS 641

Query: 605  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYS 663
            ++ +        L+   K+ LG++  T +     +  + VFA  + P++IY S  +++YS
Sbjct: 642  VITYSFKTDDYSLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYS 701

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
             VN +  S +C FNS A+P S+A+A   EL I  +D  +   I+++ +G   RR+ +   
Sbjct: 702  AVNSEGASRVCHFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIGATVRRVAYSPS 761

Query: 724  SRTFAICSLKNQSCAEESEMHFVRLL--DDQTFEFISTYPLDTFEYGCSILSCSF--SDD 779
             + F I +++ +  A+ +E+   R +  D+  F  + ++ L   E   S++   F    D
Sbjct: 762  EKAFGIGTIERK-LADGAEIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKD 820

Query: 780  SNV------YYCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFN 832
             N        + VGTAY+  E  E  +GRIL+F +++G KL  +AE   KGA  +L    
Sbjct: 821  ENGREMTKDRFVVGTAYLDDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLG 880

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
             K++AA+ + I +YK +  + GT +L+           + V   G+ IVV DLMKS+ LL
Sbjct: 881  DKIVAALVKTIVMYKVVNNNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLL 940

Query: 893  IYKHEEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 948
             +K  E     ++ E AR +   W + V  +D D +L ++   NL  +R+N  G  +++R
Sbjct: 941  EFKEGENGLPDSLTEVARHFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDR 1000

Query: 949  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 1008
             RLEV  E  LGE VNR R  ++      + V   P    GTV G I + A +  E   F
Sbjct: 1001 RRLEVTSEISLGEMVNRIRPVNIQQL---ASVTVTPRAFLGTVEGSIYLFAIINPEHQDF 1057

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEIS 1067
            L +LQ  +   ++ +G +   ++R F +  ++  +   F+DG+LIE FL+      +EI 
Sbjct: 1058 LMRLQATMAGKVESLGEMPFNEFRGFRSMVREATEPYRFVDGELIEQFLNCEPELQEEIV 1117

Query: 1068 KTMN-VSVEELCKRVEELTRLH 1088
             ++  ++V E+   +E L RLH
Sbjct: 1118 NSVGMMNVHEVKVMIEALRRLH 1139


>gi|367044684|ref|XP_003652722.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
 gi|346999984|gb|AEO66386.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
          Length = 1187

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 342/1198 (28%), Positives = 576/1198 (48%), Gaps = 128/1198 (10%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++  H+      S +E +L++ +  R+EI  L    L  +    + G IA L
Sbjct: 3    YIAPIHRPSSARHALYSQLLSDEEESLVLRRANRLEIWRLRDGLLNLVHSKVVNGTIAIL 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  RP     D LF+ T+R+++  L W+ E+S+L T     D  +R  R + +    ++D
Sbjct: 63   QKLRPKDARTDLLFVGTDRFEYFTLAWNPETSQLDTINPFNDPGERHMRDSQSQDRCLVD 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFN----IRLEELQVLDIKFLYG-CAKPTIVV 179
            P  R + +HL++G+  ++   N+       +    +RL EL +    FLY     P I +
Sbjct: 123  PSGRFLAMHLWEGVLTILRLGNRKNTATVLDWMGQVRLSELFIKASTFLYTETGHPKIAL 182

Query: 180  LYQDNKDAR--HVKTYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV------- 222
            LYQ   D+    + TY +   D++     +  N          D  A +LIPV       
Sbjct: 183  LYQSRADSSDAQLATYRLTSDDRNTELSRFDPNRDREIDAEIHDPSASMLIPVRKVEEQV 242

Query: 223  -----------PPPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRVDADGSRY 268
                          + G++++GE  ++Y    +    ++     SI  A+   D     Y
Sbjct: 243  KRHNVRNVESAKAHIGGLIVVGETRLLYIDEVTKTTVESALTEASIFVAWAEYDV--KHY 300

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
             L D  G LHLL +  E   VTG+ +  +G+TS AS + YL + ++++ S YGDSQL +L
Sbjct: 301  FLADDYGNLHLLTLETEDVVVTGMIVNRIGKTSRASNLVYLGDNLLFVASHYGDSQLFRL 360

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKD 376
            +L+ D     V++++   N+GPI+DF ++DL  +            GQ ++VTCSG +KD
Sbjct: 361  DLENDDARQLVQLVQTLPNIGPILDFEIMDLGNRGDEGQLANEYSSGQARIVTCSGVHKD 420

Query: 377  GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            G+LR VR+G+G+ +   + +L+  +G++ L S      DT L VSF++ETR+   +   +
Sbjct: 421  GTLRSVRSGVGLEDVGILADLEHCRGLFPLSSYGSPKTDT-LAVSFLTETRVFKFDSHGD 479

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE E   G     QTL   +    QL+QVT  +  L+ + S      W      ++  A
Sbjct: 480  VEEVESFSGMTFDQQTLLAMNLPKGQLLQVTPAAASLLDAESGVTIASWAPEGERTIISA 539

Query: 495  TANASQVLLATGGGHLVYLEIGDGILT-EVKHAQLEYEISCLDINPIGENPSYSQIAAVG 553
            +AN   +LL+ GG  LV L I +   T + K    + +++C+ +      P    +  VG
Sbjct: 540  SANPRWLLLSVGGTELVSLSIANDFQTVQAKDMNQQDQVACIHV-----APGLDDVGVVG 594

Query: 554  MWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCALGDGHL 605
             WT  +V I  L  L  I  E L        IPR + L      S     L  A+ DG++
Sbjct: 595  FWTSGTVSIIDLHTLEPIHGESLRTSKDDASIPRDLALVQMLPPSASGPTLFVAMQDGNV 654

Query: 606  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSN 664
            + F ++ K   L+ RK+V LG +          +    +FA ++ P++IY S  +++YS 
Sbjct: 655  VTFNVS-KDLALSGRKRVILGMRQARFHLLPQPDGIFSIFATTEHPSLIYGSEGRIVYSA 713

Query: 665  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 724
            V  +E +++CPF++ AFPD + +A + ++ I  ID  ++ H++ + +GE  RRI +  + 
Sbjct: 714  VTAEEATYICPFDTEAFPDCIVLATDAQIRISQIDRERRTHVKPLQMGEMVRRIAYSPRE 773

Query: 725  RTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFIS-TYPLDTFEYGCSILSCSFSDDSNV 782
            + F + C  ++    EE      +L+D+  F+ +  ++PL +  Y   +     ++  + 
Sbjct: 774  KVFGLGCIKRDLVAGEEVVQSSFKLVDEIIFDRVGRSFPLGSPSYTELVECVVRAELPDS 833

Query: 783  Y------YCVGTAYVL-PEENEPT--KGRILVFIVE-DGKLQLIAEKETKGAVYSLNAF- 831
            Y      + VGT+Y+  P+    T  +GRILVF V+ D    L+   E KGA   L    
Sbjct: 834  YGAPAERFLVGTSYLADPDLGAGTDARGRILVFGVDADRNPYLVLSHELKGACRCLAVMD 893

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            +GK++A + + + + ++      T EL     +      + +  RG+ I V DLMKS++L
Sbjct: 894  DGKIVAGLTKTVVVCRYEETSSTTAELTRLASYRPSTYPVELCVRGNTIAVADLMKSVAL 953

Query: 892  LIY---------------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
            + +               K  E  + E+AR + + W +AV  + DD +L A+   NL  +
Sbjct: 954  VEFVPAGADETGAAGPSSKRGEAKLVEKARHFGSVWATAVSHVQDDSWLEADAQGNLMVL 1013

Query: 937  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN---- 992
            R+N EG T E++ R+EV  E +LGE VNR R G  V   P + V  +P    GTV+    
Sbjct: 1014 RQNLEGVTAEDKKRMEVTSEMNLGEMVNRIR-GIEVETTPGAIV--VPKAFLGTVSLRCG 1070

Query: 993  ---------------------GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                                 G+      +PH Q L L + Q  L  VIK  GG+    +
Sbjct: 1071 ESLFGMNERRFANTGQWQVEGGIYMFATVVPHAQDLLL-RFQAKLADVIKTAGGIEFRTY 1129

Query: 1032 RSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            R+F N ++  D    F+DG+L+E FLD+     + I + +  +VE++   VEEL R+H
Sbjct: 1130 RAFRNAEREGDGPFRFIDGELLERFLDVDEATQEVICQGLGPTVEDMRNLVEELRRMH 1187


>gi|296803967|ref|XP_002842836.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
 gi|238846186|gb|EEQ35848.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
          Length = 1143

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 347/1165 (29%), Positives = 584/1165 (50%), Gaps = 106/1165 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F  P E  LI+AK  R+E++  +  GL       +YGRI  L
Sbjct: 3    YVVPIHGASSIRHAIKARFIKPDEDCLIVAKANRLELYTQSADGLVLQHSSTVYGRITAL 62

Query: 66   E-LFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            + L RP     D LF+ T++Y +  L WDA  ++L T R   D++D   R   +    ++
Sbjct: 63   QKLPRPDPALTDVLFVGTDQYAYFSLTWDAVHNQLRTERKYIDLADGSLREAHSDDRCLL 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF-----DNKG---------------QLKEAFNIRLEELQV 163
            DP    + L +Y+G+  V+P       NK                QL E   +R+EEL V
Sbjct: 123  DPSGSFLTLEVYEGVVSVVPLVSADTHNKRSRSAAAHVTPSATLEQLGEPLQVRIEELMV 182

Query: 164  LDIKFLYGCAK--PTIVVLYQDNKDARHVKTYEVA---------------LKDKDFVEGP 206
                FL   A   P + +LY+D++    +K  ++                LKD   + G 
Sbjct: 183  RSSAFLDQEASHAPRLALLYEDSQGKARLKLRDLKYTHAALSGDGGSAAELKDVTTLSG- 241

Query: 207  WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIRPSITKAYGRVDAD 264
                 LD GA LLIP+P PL G+LI+GE TI Y   S N   + P+  S T     V  D
Sbjct: 242  ----ELDLGASLLIPIPRPLGGLLILGESTITYVDVSQNEIISRPLAES-TVFVAWVQVD 296

Query: 265  GSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
            G R+LL D  G L  L+++      V   K++LLG+TS AS + YLD  +V++GS  GDS
Sbjct: 297  GQRWLLADDYGRLFFLMLVLDPDNAVEAWKVDLLGQTSRASVLVYLDGGLVFVGSHQGDS 356

Query: 324  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSGAY 374
            Q+I++      +G + ++++   N+ PI+DF V+DL  +         GQ ++VT SGA+
Sbjct: 357  QVIQIR-----EGGF-DLVQTIANIAPILDFTVMDLGDRSGEAREFSSGQTRIVTGSGAF 410

Query: 375  KDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
             DGSLR VR+G+GI +   +  ++ I  +W LR++  +PF   L+VSF++E+R+   + E
Sbjct: 411  GDGSLRSVRSGVGIEDLGVLASMEHITDLWGLRAACPEPFSDTLLVSFVNESRVFHFSPE 470

Query: 434  DELEETEIEGFCS---QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PGY 489
             ++EE E EGF        TL   +   N+++QVT    +++   S      W+S     
Sbjct: 471  GDVEEKE-EGFLGLVFSQSTLLAANLPGNRIIQVTENMAKIIDLDSS--MTTWQSSHEDS 527

Query: 490  SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQI 549
            ++  A+AN   ++L  GG  L+ + +        K  + + ++S + I       S +Q 
Sbjct: 528  AITSASANDDYLVLVFGGIRLICVSLSSYEEVGSKDFEADNQVSGMTIPA-----SPAQA 582

Query: 550  AAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCA--FEGISYLLCALGDGHL 605
              V +     + I  LPDL +  K+ LG  GE IPRSV++    ++    L  ++ DG +
Sbjct: 583  CIVCLPQSAEIVILDLPDLKVQNKQTLGEPGEAIPRSVIVAEILYDQSPTLFVSMADGTV 642

Query: 606  LNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 664
             +F  +++   +++  K++LG+ QP+  +        +VFA  D P++IY+S  +++YS 
Sbjct: 643  FSFSFSLEAFTISNSSKITLGSEQPLFKKLPRGNGQYNVFATCDHPSLIYASEGRIVYSA 702

Query: 665  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 724
            V+    S +C  N+ A+P S+A++ + EL I  +D+ +   I ++P+    RR+ +    
Sbjct: 703  VDSDSASRICNLNTQAYPGSIALSNQRELKIAIVDEERTTQIHTLPMHASVRRLAYSPVE 762

Query: 725  RTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN- 781
            + F + ++     +  E+    FV L D+  F  +ST+ L + E   S++     D  + 
Sbjct: 763  KAFGLGTVTRTISNGVEKVSSSFV-LADEILFRPLSTHELRSDELVESVIRSQIPDGEDE 821

Query: 782  ----VY---YCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAF-N 832
                V+   + VGTA++    ++  +GRIL F V   + L L+ +K   GA  +L    N
Sbjct: 822  VGNTVFRDLFFVGTAFLDDVGDDNVRGRILAFEVNRSRELALLVDKPVLGACRTLAVMDN 881

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
             KL+A + + + +++ +    G  EL  +  +      + V    + I V D+MKS+SL+
Sbjct: 882  DKLVAGLVKSVSIFRIVRDSFGNIELLKQTAYRTSTAPIDVSVTENTIAVADVMKSVSLV 941

Query: 893  IYK-HEEGAI----EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE 947
             Y   EEGA+    EE AR Y   W +AV  +++++YL AE   NL  +++N+ G T+ +
Sbjct: 942  QYTPAEEGALEPKFEEIARHYQTLWSTAVGHIEENVYLLAEAEGNLVVLQRNTTGVTESD 1001

Query: 948  RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL 1007
            R RL+   E  LGE VNR     + ++ P +        +  TV+G I +   +      
Sbjct: 1002 RKRLQPTSEMRLGEMVNRIH--PITVQAP-AKAAVSARALLATVDGSIYLFGLINPTYID 1058

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEI 1066
             L +LQ  +  V    G +   ++R+F    +  D    F+DG+LIE FL  + +  +EI
Sbjct: 1059 LLLRLQAIMASVTVSPGEIPFTKYRAFRTTVRQSDEPFRFVDGELIERFLGCAPSTQEEI 1118

Query: 1067 SKTM---NVSVEELCKRVEELTRLH 1088
            +  +   N++V  L + ++EL R+H
Sbjct: 1119 ASRLDDQNITVASLKEMIDELRRMH 1143


>gi|303313681|ref|XP_003066852.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
 gi|240106514|gb|EER24707.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
 gi|320031496|gb|EFW13458.1| UV-damaged DNA binding protein [Coccidioides posadasii str. Silveira]
          Length = 1144

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 344/1167 (29%), Positives = 582/1167 (49%), Gaps = 109/1167 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H  ++V ++    F +P E  L++AK  R+E +L TP GL       IYG+I+ L
Sbjct: 3    YITPLHHASSVDNAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVL 62

Query: 66   E-LFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            + + R H  A D LF+ T+RY +  L WD  + +L T +   D++D   R   +G    +
Sbjct: 63   QKVPRSHSSATDLLFVGTDRYAYFTLSWDPSTCQLHTEQKYLDIADPSLRDNQSGDRSWV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF-------------------DNKGQLKEAFNIRLEELQVL 164
            DP  + + + +Y+G+  VIP                    + +  L E    R+EEL V 
Sbjct: 123  DPSGKFLTMEIYEGIISVIPIAQEPLKRPSPSASRSSGTSEQREYLGEPLQTRIEELIVR 182

Query: 165  DIKFLY--GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEG-PWSQ------------ 209
               FL+      P I +LY++ +    +K     L+D  +  G P  +            
Sbjct: 183  STAFLHHDPTKPPRIAILYENTQGKVKLK-----LRDLIYSRGIPGGEASAAEFRDVDDL 237

Query: 210  -NNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDAD 264
             ++L+ GAD+L+PVP PL GVLI+GE+ I Y      + I  RP    +I  A+ ++D  
Sbjct: 238  YDDLELGADILVPVPLPLGGVLILGEKFIKYIDTVKNETI-TRPLENNTIFVAWEQLD-- 294

Query: 265  GSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
              R+LL D  G L   ++I +    V   K+ LLGETS AS + +L   VV++GS  GDS
Sbjct: 295  NQRWLLADDYGRLFFFMLILNSANAVQSWKVGLLGETSRASALVHLGGGVVFLGSHQGDS 354

Query: 324  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGA 373
             +I++      +GS+ E+++   N+GPI+DF V+DL  +G          Q ++VT SGA
Sbjct: 355  HVIRIT-----EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGA 408

Query: 374  YKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNL 432
            ++DGSLR VR+G+G+ +   +  ++ I  +W + +   + F   L++SF+ E+R+   + 
Sbjct: 409  FRDGSLRSVRSGVGMEDLGVLGAMEHITDLWGVSAFCPEGFCDTLLLSFVDESRVFHFSP 468

Query: 433  EDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
            + E+EE +   G      T+   +    +++QVT    R+    SR    EW +     +
Sbjct: 469  DGEVEEKDDFLGLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKI 528

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEIS--CLDINPIGENPSYSQ 548
              A++N   ++L  GG  L+  +IGD I ++  K  + + ++S   L  +PI       Q
Sbjct: 529  TAASSNDRHLVLMVGGQKLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSPI-------Q 581

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLL-CAF-EGISYLLCALGDGH 604
               +       V I  L DLN+   E LG  G+ +PRSVL+ C F +    L  A+ DG 
Sbjct: 582  ACILCFPQSAEVTIIDLTDLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVAMADGS 641

Query: 605  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYS 663
            + +F LN+    L+D  K+ LG++    +     +  + +FA  D P++IY+S  +++YS
Sbjct: 642  VFSFSLNVANYSLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASEDRIVYS 701

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
             VN  + + +C FN+ A+P ++A+A   EL I  +D  +   I+++ + E  RR  +   
Sbjct: 702  AVNSDKATRICHFNAEAYPGAIAVATPDELKIALVDAERTTQIQTLMINETVRRTSYSST 761

Query: 724  SRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILSCSFSDDS 780
             R F + +++       EE + HF+ L D+  F  +S + L+  E   C I +     ++
Sbjct: 762  ERAFGLGTIQRTLVQNVEEVKSHFI-LADEIMFRQLSVFDLNPNELVECVIRTEHPGSNA 820

Query: 781  NV-------YYCVGTAYV-LPEENEP-TKGRILVFIVEDGK-LQLIAEKETKGAVYSLNA 830
             +        + VGT+ +  PEE E  TKGRIL+F V+  + L+ I +   +GA  +L  
Sbjct: 821  QMGSSRPRDIFIVGTSVLDTPEEAEARTKGRILIFDVDTNRELRKICDFPVRGACRALAM 880

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
             N K++AA+ + + +      +    E++ E  +      + +   G+ I V DLMKSIS
Sbjct: 881  INNKIVAALMKTVVVLNIKKGNLYNFEIEKEASYRTSTAPVDISVTGNIIAVADLMKSIS 940

Query: 891  LLIYKHEEGA----IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 946
            L+ Y   EG     ++E AR Y   W +A   + ++ +L A+   NL  + +N+ G T++
Sbjct: 941  LVEYHAGEGGQPDTLKEVARHYQTLWTTAAAPVAENEFLVADAEGNLVVLNRNTTGVTED 1000

Query: 947  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 1006
            +R R++V  E  LGE VNR  H   +   P+S V  IP     TV+G I +   +     
Sbjct: 1001 DRRRMQVTSELRLGEMVNRI-HPMDLQTSPESPV--IPKAFLATVDGSIYLFGLISPSAQ 1057

Query: 1007 LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFL----DLSRT 1061
              L +LQ+ L   +   G +   ++R+F +  ++  +   F+DG+LIE FL    D+   
Sbjct: 1058 DTLMRLQSALADFVASPGEIPFNKYRAFKSSVRQAEEPFRFVDGELIEQFLTFPPDIQEA 1117

Query: 1062 RMDEISKTMNVSVEELCKRVEELTRLH 1088
             +  +     V+V E+   +E L R+H
Sbjct: 1118 VLARMDGGGRVNVIEIKDMIEGLKRMH 1144


>gi|402595041|gb|EJW88967.1| hypothetical protein WUBG_00126 [Wuchereria bancrofti]
          Length = 621

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/629 (41%), Positives = 395/629 (62%), Gaps = 29/629 (4%)

Query: 5   NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
           +Y+VTA+KPT VTH+ VG+F  P ELNL++AK  R+E+ L+TP+GL+P  + P++GRIAT
Sbjct: 4   SYIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIAT 63

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
           ++LFR  GE  D L I T +Y   +++W   +SEL TRA G + DR+GRP++ G I  + 
Sbjct: 64  IKLFRAPGEDVDSLLILTAKYHLAIIRW-TPTSELRTRASGHIVDRVGRPSETGMIATVH 122

Query: 125 PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
               ++   LYDGL K++ + N+G+    FN+R ++L ++DI F+    +PT+  +YQD+
Sbjct: 123 SSGLMV-FRLYDGLLKIVQW-NEGKDLRGFNVRCDDLYIVDITFMSDPDRPTLAYIYQDD 180

Query: 185 KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS--- 241
            + RH+K   + + DK+     W  +NL+  A+++I VP P+ G LI G + I Y     
Sbjct: 181 -NGRHIKVVTLNIDDKELSSPLWKHDNLEGEANIVISVPEPVGGCLIAGPDAISYHKGGD 239

Query: 242 -ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK--------- 288
            A  +  +P   +  +    Y  VD DG RYLL D AG L++L++   K++         
Sbjct: 240 DALRYAGVPGSRLHNTHPNCYAPVDRDGQRYLLADLAGNLYMLLLELGKDQEQDENSAVI 299

Query: 289 VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGS-YVEVLERYVN 347
           V  +K+E LGET IA  + YLDN V +IGS +GDSQLI+L+ +P A G+ Y+ +L+ Y N
Sbjct: 300 VRDMKVESLGETCIAECMCYLDNGVCFIGSRFGDSQLIRLSTEPRADGTGYISLLDSYTN 359

Query: 348 LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
           L PI D  V  +   GQ Q++TCSGAYKDG++RI+RNGIGI E ASVEL+GIK M++LR+
Sbjct: 360 LAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKNMFTLRT 417

Query: 408 STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTS 466
             D+ FD +L++SF SET +L +N E ELE+TEI GF     TL+     +++ ++QVT 
Sbjct: 418 RGDE-FDDYLILSFDSETHVLFINGE-ELEDTEITGFAVDGATLWAGCLFHSKTILQVTH 475

Query: 467 GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA 526
           G V L+   + ++   WKSP   ++      ++  L+   G  L+YLE        +   
Sbjct: 476 GEVILIDGDNIQV---WKSPKWITLLNYDERSTGQLVVACGALLIYLEANSAGFKVITQI 532

Query: 527 QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL 586
           + E+EISC+DI PIG+    S+I AVG WTD+SV + +LP L  + +E + G+++ RS++
Sbjct: 533 ECEFEISCIDITPIGKGTLRSEICAVGYWTDLSVALRALPQLVEVVREKIAGDMLSRSIM 592

Query: 587 LCAFEGISYLLCALGDGHLLNFLLNMKTG 615
           L   EG  YLL ALGDG +  F ++MKTG
Sbjct: 593 LSPMEGHVYLLVALGDGTVHYFQIDMKTG 621


>gi|296411833|ref|XP_002835634.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629420|emb|CAZ79791.1| unnamed protein product [Tuber melanosporum]
          Length = 1053

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 321/1029 (31%), Positives = 518/1029 (50%), Gaps = 76/1029 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y+ T ++ ++V  +    F +  E +LI+AK + IE++ L   G+      PIYGR+  
Sbjct: 2    SYLATIYEASSVRIAIKAEFLTVGETSLIVAKTSHIEVYKLDGPGIVLEDKFPIYGRVIA 61

Query: 65   LELFRPHGEAQDFLFIATER--YKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            L  FRP   A D L I   +  Y++  + WD  + +  T  M         P  +    +
Sbjct: 62   LAAFRPVKSATDHLLIVIGKVNYQYFTISWDPVAKKPKTEHMAVNFSEYNAPLSDSFQCL 121

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNK--------------GQLKEAFNIRLEELQVLDIKF 168
             DP   ++G+H+Y G+F VIP   +              G +     +RL+EL++LD+KF
Sbjct: 122  ADPGKNMLGIHVYKGIFLVIPQIQQSIKGSRRSRADLDVGNIGNPCVVRLKELEILDLKF 181

Query: 169  LYGCAKPTIVVLYQ-DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNG--ADLLIPVPPP 225
            L+G   P + VLY+    D   V TYE+++K  +     W   +L  G  A  LIPV PP
Sbjct: 182  LFGTISPVLAVLYKPSGADEMAVNTYELSVKSGEVKLLDWRIRDLKGGREALFLIPVRPP 241

Query: 226  LCGVLIIGEETIVYCSANAFKA-IPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITH 284
              G+L+IG   I Y      K  +P+ P +      + +   RY+LGD AG LH+L ++ 
Sbjct: 242  SNGLLLIGVTKIQYFDNYGNKTFLPVDPPMVWVTWEMLSP-ERYILGDEAGGLHMLTLSA 300

Query: 285  E-KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLE 343
               +   GL ++L+G  SI   + +L+  ++++GS  GDSQL  L L  +     V V +
Sbjct: 301  GLMDTKVGLHLKLVGNASIPEILVHLNQGLLFLGSHSGDSQL--LQLYQNGIKPMVRVQQ 358

Query: 344  RYVNLGPIVDFCVVDLE--------RQ---GQGQVVTCSGAYKDGSLRIVRNGIGINEQA 392
               N+GPIVDF V+DL+        RQ   G  + ++ SG +  G LR +R+G+G+ +  
Sbjct: 359  VLRNIGPIVDFRVMDLDYSRSDEVMRQYSPGHIRFLSASGGHTQGHLRTIRSGVGLYDLG 418

Query: 393  SV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFCSQTQT 450
             + E+ GI+G+WSLRS     FD  LVVSFI ETRI   +   E+EE  E  GF    +T
Sbjct: 419  FLGEMSGIRGLWSLRSIPGSSFDDVLVVSFIEETRIFKFDNSGEIEELYEFMGFALNQRT 478

Query: 451  LFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ-VLLATGGGH 509
            +  H  +  + +QVT+ +V+LV   S  L  E  S P  S+ +  A+A+Q +L+   G  
Sbjct: 479  ILAHSVVGGRFLQVTATAVKLVDVRSNTLIAE--SYPDKSLTITIASANQDLLIYAMGPT 536

Query: 510  LVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLN 569
            LV L +   +   ++    E EISCL++       S S I AVG WT   V I S+   +
Sbjct: 537  LVLLNLARDLEEHIR-TTFENEISCLNMPS-----SPSTICAVGFWTVSLVLILSVQSFS 590

Query: 570  LITKEHLGGE---IIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
            ++++E L  E     PRS+L       G   LL ALGDG +  F LN  T  L++RK + 
Sbjct: 591  ILSQEILSQEDSAATPRSLLFARLLENGPPTLLVALGDGSMFTFALNETTCGLSERKHII 650

Query: 625  LGTQPITLRTFSSKNT-THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683
            LG QPI  ++    N    VFA  D P+VIY S+ +++Y++V   + +++  FNS +FPD
Sbjct: 651  LGAQPIRFQSIPGGNGGVTVFATCDHPSVIYGSDGRIVYASVTADKPTYVTSFNSPSFPD 710

Query: 684  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 743
            ++ IA E +L +  +D ++ +H++S+P+G+  RRI + ++    AI ++         + 
Sbjct: 711  AVVIASEDDLKLSVVDPVRTMHVQSLPVGDVVRRIAYSKEKNIIAIVTVSKVPDTRTGDY 770

Query: 744  HF---VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLPEENE 797
             +   +RL+D+  F  + +Y L+  E   S+ S      + +    +  GT Y     +E
Sbjct: 771  LYSSCIRLVDNTAFSVVDSYELNQLELVESLASGKICGGNGLLSEGFLAGTVYPGGGRDE 830

Query: 798  PTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFN-GKLLAAINQKIQLYKWMLRDDGT 855
              KGRI+VF   E  +++LI   +T G+V  +     GK +AAI ++I LY     D  +
Sbjct: 831  SEKGRIIVFNASETKRIKLIVSYDTPGSVNGIQIVGEGKFVAAIGREIHLYSLKYTDIQS 890

Query: 856  RELQSE------------CGHHGHILALYVQTRGDFIVVGDLMKSISLLIY----KHEEG 899
            +   SE                 H   L V    D I V D M   S+L +    +++  
Sbjct: 891  KTAASESVGATGCTITKLASFKAHSTPLDVAVYNDIIAVCDFMHGPSILQHIEDKENKSS 950

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
               E AR    +W++A+E+LD+     A+ + NL   ++   G T+++R +L+ +    +
Sbjct: 951  EFVEVARAPKPSWLTALELLDEKTVFCADTDGNLVVWQRQLSGVTEDDRKQLQQIASMKI 1010

Query: 960  GEFVNRFRH 968
            GE ++R R 
Sbjct: 1011 GEDIDRIRR 1019


>gi|134077422|emb|CAK45676.1| unnamed protein product [Aspergillus niger]
          Length = 1133

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 342/1155 (29%), Positives = 576/1155 (49%), Gaps = 116/1155 (10%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ ++   +F + +E  L++A   R+EI+ LTP+GL       ++ ++  L
Sbjct: 3    YVVPIHRASSIRNALKLHFMNAEEEALVVALANRLEIYSLTPEGLNLAASCSLFAKVTML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +C L WD E +++ T R   D+SD   R    G   +I
Sbjct: 63   ARLPAPANSPTDHLFVGTDRYTYCTLSWDGERNQIRTERNYVDISDPSSREAQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+G+  V+P                        G+L E    R++EL  
Sbjct: 123  DPSGRFMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDEL-- 180

Query: 164  LDIKFLYGCAKPTIVVLYQDNKDARHVKT----YEVALK----DKDFVEG--PWSQNNLD 213
                         + +LY+DN+    +K     Y  A      D  F E    +SQ  LD
Sbjct: 181  -------------LALLYEDNQKKVRLKVRALHYSAATASTGADAAFEESLDGFSQE-LD 226

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYL 269
             GA  LIPVP PL G+L++GE +I Y   ++ + +  RP    +I  A+ +VD+   R+L
Sbjct: 227  LGASHLIPVPAPLGGLLVLGETSIKYVDTDSNEIVS-RPLDEATIFVAWEQVDS--QRWL 283

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L+++     +V   K++ LG T+ AS + YL   V+++GS  GDSQ++++
Sbjct: 284  LADDYGRLFFLMLVLDSNNQVQSWKLDHLGNTARASVLIYLGGGVIFVGSHQGDSQVLRI 343

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDG 377
                   GS +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG
Sbjct: 344  -----GNGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDG 397

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            +LR VR+G+G+ E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E+
Sbjct: 398  TLRSVRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEV 457

Query: 437  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE +   G      TL   +    +++QVT   V +       + NEW  P    +  A+
Sbjct: 458  EELDSFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSAS 517

Query: 496  ANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
            AN   ++L +GG  +  L+I + + +   K    + +IS + + P+    S + +  VG 
Sbjct: 518  ANNDSIVLVSGGQLMTVLDINNDVRVISQKDFGADSQISGVTV-PL----SSAGVCIVGF 572

Query: 555  WTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLL 610
                 V +  L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ +  
Sbjct: 573  PQLAKVSVLDLGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYSF 632

Query: 611  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKE 669
            + +   LT   ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN + 
Sbjct: 633  DARNYSLTGMNRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEG 692

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 729
             S +C FNS A+P S+A+A   +L I  +D  +   I+++P+GE  RR+ +    + F I
Sbjct: 693  ASRVCHFNSEAYPGSIAVATRHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFGI 752

Query: 730  CSL--KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSNV 782
             ++  K +  AE  +  FV L D+  F  +  + L   E   S++   FS     +  +V
Sbjct: 753  GTIERKLKDGAEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDV 811

Query: 783  Y---YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAA 838
            +   + VGTAY+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++AA
Sbjct: 812  FKDRFVVGTAYLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAA 871

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + + + +Y  +  D G  +L+    +      + V   G+ I V DLMKS+ L+ Y   E
Sbjct: 872  LVKTVVIYGVVNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGE 931

Query: 899  G----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
                 ++ E AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV 
Sbjct: 932  NGSPDSLTEVARHFQTVWATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVT 991

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            GE  LGE VNR R           ++ Q+ +V   TV G I + A +  E   FL +LQ 
Sbjct: 992  GEISLGEMVNRIRP---------VNIQQLASV---TVEGSIYLFAIINPEHQDFLMRLQA 1039

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-V 1072
             +   ++ +G +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  ++  +
Sbjct: 1040 TMAGKVESLGNIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVDSVGMM 1099

Query: 1073 SVEELCKRVEELTRL 1087
            +V+E  +    LT L
Sbjct: 1100 NVDERIRPTVYLTSL 1114


>gi|336263557|ref|XP_003346558.1| hypothetical protein SMAC_04731 [Sordaria macrospora k-hell]
 gi|380090453|emb|CCC11749.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1149

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 345/1163 (29%), Positives = 571/1163 (49%), Gaps = 110/1163 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   H+P++V H+   N  SP+E +LIIAK  RIEI  L    L  +    I G I  L
Sbjct: 3    YVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLADGHLSMIHSKVINGTITIL 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  +P     D LF+ T+++++   +WD E+ +L T     D  +R  R + +    I+D
Sbjct: 63   QKLQPKDHPTDLLFVGTDQFEYFTAEWDHETQQLKTLNRFSDPGERHMRDSQSQDKCIVD 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNI----RLEELQVLDIKFLYG-CAKPTIVV 179
            P  R + +HL++G+  V    N+       +I    RL EL +    FLY     P +  
Sbjct: 123  PSGRFMAMHLWEGVLSVWRLGNRKSTATTLDILVQVRLSELFIKGSTFLYTETGIPKVAF 182

Query: 180  LYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP---------------- 223
            LY++  ++   K       D D VE P        GA +LIPV                 
Sbjct: 183  LYRNQANSNETKLATDREIDAD-VEDP--------GAGILIPVKKVEEEVKRHHFRNTEQ 233

Query: 224  --PPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLH 278
              P + G+++IGE  ++Y    +    ++    PSI  A+   D   + Y L D  G LH
Sbjct: 234  AKPHVGGLIVIGETRLLYIDEVTKTQVESALKEPSIFVAWAEYDP--THYFLADDYGNLH 291

Query: 279  LLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSY 338
            LL I  E   VTG+ +  +G T+ A  ++YL + ++++GS YG+SQL +LNL  +     
Sbjct: 292  LLTILTEGAVVTGMDVSNIGRTARAHVLTYLGDDMLFVGSHYGNSQLYRLNLLNEDLNEI 351

Query: 339  VEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDGSLRIVRNGI 386
            +++++   N+GPI DF ++D+  +            GQ ++VT SG +KDG+LR VR+G+
Sbjct: 352  LQLVQVLENIGPITDFTIMDMGNRENDSQLGNEYSSGQARIVTASGIFKDGTLRSVRSGV 411

Query: 387  GINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFC 445
            G+ + A + ELQ  + ++SL+S      DT LV SF+++TRI   +   E+E  E+  +C
Sbjct: 412  GLQDIAILGELQHTRALFSLQSYNSSRADT-LVASFLTDTRIFRFDPHGEIE--EVADYC 468

Query: 446  S---QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 502
                Q QTL   +    QL+QVT+ +  L+ + S      W       +  A+AN   +L
Sbjct: 469  GMDLQHQTLLTTNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDRQIINASANKHWLL 528

Query: 503  LATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 561
            L+  G  LV + I  D  + + K    + +I+C+ +      P  S +  VG WT  +V 
Sbjct: 529  LSVQGTTLVSINIDNDLTVVQEKDVSEQDQIACIHV-----APQLSDVGVVGFWTSGTVS 583

Query: 562  IFSLPDLNLITKEHLGGEI----IPRSVLLCAF----EGISYLLCALGDGHLLNFLLNMK 613
            I  +  L  I  E L        IPR ++L        G++ L  A+ DG+++ F     
Sbjct: 584  IIDMSTLEPIHGESLRRSADDASIPRDIVLAKVLPNTPGMT-LFIAMEDGNVVTF----N 638

Query: 614  TGE---LTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKE 669
             GE    + RK V LGT+         ++  + +FA ++ P++IY S  +++YS V  ++
Sbjct: 639  IGEDLTFSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYGSEGRIIYSAVTAED 698

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 729
             + +CPF+S AFP ++ ++ E E+ I  ID  ++ H+RS+ LGE  RRI +    + F +
Sbjct: 699  ATCVCPFDSEAFPGAVVLSTETEIKISEIDTARRTHVRSLELGEMVRRIAYSPSEKGFGL 758

Query: 730  -CSLKNQSCAEESEMHFVRLLDDQTFEFIST-YPLDTFEYGCSILSCSFSDDSNVY---- 783
             C  +     EE      +L+D+  F      + L T  Y   +     ++  + Y    
Sbjct: 759  GCIRREMVNGEEIIQSSFKLVDEILFARAGREFRLGTSSYSELVEDVIRAELPDSYGNLL 818

Query: 784  --YCVGTAYVL-PEENEPT--KGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLA 837
              + VGT+++  P+    T  +GRILVF ++  +   L+ + E +GA  +L     K++A
Sbjct: 819  ERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELRGACRALAVMGSKIVA 878

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY--- 894
            A+++ + + ++         L     +      + +   G+ I V D+MKS +L+ Y   
Sbjct: 879  ALHKTVVISQYEETSSTEARLVKLASYRCTTYPIDIAVHGNIIAVADMMKSATLVEYVQA 938

Query: 895  -----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 949
                 K+E   + E AR  ++ W +AV  ++ + +L A+ N NL  +++N EG T E++ 
Sbjct: 939  KTEEEKYEPAKLVECARHRHSAWATAVAHVEGESWLEADANGNLVVLQRNVEGVTAEDQR 998

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 1009
            +L +  E +LGE VN+ R    V   P++ +  IP     T  G I +  ++  EQ L L
Sbjct: 999  QLRITSELNLGEQVNKIRPIK-VETSPNTII--IPRAFLATAEGGIYLFGTIAREQDLLL 1055

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKK------TVDAKNFLDGDLIESFLDLSRTRM 1063
             + Q  L  VIK VG L+   +R+F N ++      T     FLDG+L+E FLD+  T  
Sbjct: 1056 -RFQDKLAAVIKTVGELDFNSYRAFRNAERGPETDGTTGPVRFLDGELLERFLDVDETTQ 1114

Query: 1064 DEISKTMNVSVEELCKRVEELTR 1086
             EI + +  SVE++   VEEL R
Sbjct: 1115 KEICEGLGPSVEQMRNMVEELRR 1137


>gi|85107301|ref|XP_962347.1| hypothetical protein NCU06605 [Neurospora crassa OR74A]
 gi|28923951|gb|EAA33111.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1158

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 344/1174 (29%), Positives = 579/1174 (49%), Gaps = 109/1174 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   H+P++V H+   N  SP+E +LIIAK  RIEI  L    L  +    I G I  L
Sbjct: 3    YVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLADGHLSMIHSKVINGTITIL 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  +P     D LF+ T+++++   +WD E+ +L T     D  +R  R + +    I+D
Sbjct: 63   QKLQPKDHPTDLLFVGTDQFEYFTAEWDRETQQLKTLNRFSDPGERHMRDSQSQNKCIVD 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNI----RLEELQVLDIKFLYG-CAKPTIVV 179
            P  R + +HL++G+  V    N+       +I    RL EL +    FLY     P +  
Sbjct: 123  PSGRFMAMHLWEGVLSVWRLGNRKNTATTLDILVQVRLSELFIKGSTFLYTETGIPKVAF 182

Query: 180  LYQDNKDARHVK--TYEVALKDKDFVEGPWSQNN--------LDNGADLLIPVP------ 223
            LY++  ++   K  TY +   D+      +             D GA +LIPV       
Sbjct: 183  LYRNQANSNETKLATYRLTSDDRHTEISKFDPTRDREIDADVEDPGAGILIPVKKVEEEV 242

Query: 224  ------------PPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRVDADGSRY 268
                        P + G++++GE  ++Y    +    ++    PSI  A+   D   + Y
Sbjct: 243  KRHHFRNTEQAKPHVGGLIVVGETRLLYIDEVTKTQVESALREPSIFVAWAEYDP--THY 300

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
             L D  G LHLL I  E   VTG+ +  +G+T+ A  ++YL + ++++GS YG+SQL +L
Sbjct: 301  FLSDDYGNLHLLTILTEGAVVTGMDVSNIGKTARAHVLTYLGDDMLFVGSHYGNSQLYRL 360

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKD 376
            NL  +     +++++   N+GP+ DF V+D+  +            GQ ++VT SG +KD
Sbjct: 361  NLLSEDLSEILQLVQVLENIGPVTDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKD 420

Query: 377  GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            G+LR VR+G+G+ + A + ELQ  + ++SL+S      DT LV SF+++TRI   +   E
Sbjct: 421  GTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSPRVDT-LVASFLTDTRIFKFDPHGE 479

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE +   G   Q QTL   +    QL+QVT+ +  L+ + S      W       +  A
Sbjct: 480  IEEVDNYYGMDLQHQTLLATNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDRQIINA 539

Query: 495  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYSQIAAV 552
            +AN   +LL+  G  LV + I D  LT V+   +  + +I+C+ +      P  S +  V
Sbjct: 540  SANKHWLLLSVQGTTLVSINI-DNDLTVVQEKDISEQDQIACIHV-----APQLSDVGVV 593

Query: 553  GMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF----EGISYLLCALGDGH 604
            G WT  +V I  +  L  I  E L        IPR ++L        G++ L  A+ DG+
Sbjct: 594  GFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPRDLVLAKVLPNAPGMT-LFIAMEDGN 652

Query: 605  LLNFLLNMKTGE---LTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKL 660
            ++ F      GE    + RK V LGT+         ++  + +FA ++ P++IY S  ++
Sbjct: 653  VVTF----NIGEDLTFSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYGSEGRI 708

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            +YS V  ++ + +CPF+S AFP ++ ++ E E+ I  ID  ++ H+RS+ LGE  RRI +
Sbjct: 709  IYSAVTAEDATCVCPFDSEAFPGAVILSTENEIRISEIDTARQTHVRSLELGEMVRRIAY 768

Query: 721  QEQSRTFAICSLKNQSCAEESEMH-FVRLLDDQTFEFIST-YPLDTFEYGCSILSCSFSD 778
                + F +  ++ +    E  +H   +L+D+  F  +   + L T  Y   +     ++
Sbjct: 769  SPSEKGFGLGCIRREVVNGEEIIHSSFKLVDEILFARVGKEFMLGTSSYSELVEDVIRAE 828

Query: 779  DSNVY------YCVGTAYVL-PEENEPT--KGRILVFIVEDGK-LQLIAEKETKGAVYSL 828
              + Y      + VGT+++  P+    T  +GRILVF ++  +   L+ + E KG   +L
Sbjct: 829  LPDSYGNLVERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELKGGCRAL 888

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
                 K++AA+++ + + ++         L     +      + +   G+ I V D+MKS
Sbjct: 889  AVMGSKIVAALHKTVVISQYEETSSTEAHLVKLASYRCTTYPVDIAVHGNMIAVADMMKS 948

Query: 889  ISLLIY--------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
             +L+ Y        K E   + E AR  ++ W +AV  ++ + +L A+ N NL  +++N+
Sbjct: 949  ATLVEYVPAKTGGEKSEAPKLVECARHRHSAWATAVAHVEGESWLEADANGNLIVLQRNA 1008

Query: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
            EG T E++ +L +  E +LGE VN+ R    V   P++ +  IP     T  G I +  +
Sbjct: 1009 EGVTVEDQRQLRITSELNLGEQVNKIRPIK-VETSPNAII--IPRAFLATAEGGIYMFGT 1065

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK------NFLDGDLIES 1054
            +  EQ L L + Q  L  VIK VG L+   +R+F N ++  +A        FLDG+L+E 
Sbjct: 1066 IAREQDLLL-RFQDKLAAVIKTVGELDFNSYRAFRNAERGPEADGTTGPVRFLDGELLER 1124

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            FLD+      EI + +  SVE++   VEEL R+H
Sbjct: 1125 FLDVDEKTQKEICEGLGPSVEQMRNMVEELRRMH 1158


>gi|396465264|ref|XP_003837240.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
            binding / protein binding [Leptosphaeria maculans JN3]
 gi|312213798|emb|CBX93800.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
            binding / protein binding [Leptosphaeria maculans JN3]
          Length = 1089

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 321/1107 (28%), Positives = 555/1107 (50%), Gaps = 102/1107 (9%)

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            L+  RP     D LF+ T+R+ +  L WD++  +L T ++   V+D   R +  G+   +
Sbjct: 2    LQKLRPALSPTDHLFVGTDRFMYFTLSWDSDKKQLQTEKSFASVADNAARESQTGERCHV 61

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQ----------LKEAFNIRLEELQVLDIKFLYGCA 173
            DP  R + + +Y+G+  VIP   +G+          L E   +RL E+ V    FL   +
Sbjct: 62   DPTGRFMTVEVYEGIMTVIPLVQRGKKRKQEPDIAHLGEPQPVRLSEMFVRSSAFLRPRS 121

Query: 174  ---KPTIVVLYQDNKDARHVKTYEVALKDKDFVE---GPWSQNNLDNGADLLIPVPPPLC 227
               KP I +LY+D+     +K  E+     D VE   G   +  L+ G+  LIP+  P  
Sbjct: 122  FDDKPKIALLYEDSHSQVKLKLRELTFAGGDAVELEEGETCRAELELGSSHLIPLEEPTH 181

Query: 228  GVLIIGEETIVYC--SANAFKAIPIR-PSITKAYGRVDADGSRYLLGDHAGLLHL-LVIT 283
            G+++I E +I Y    +   +  P+   +I  A+ R+DA   R++L D  G L++ ++I 
Sbjct: 182  GLIVIAETSIGYYDDESGELQTEPLEEATIFVAWERIDA--QRFVLADDYGRLYMFMLIL 239

Query: 284  HEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLE 343
              + KV   K++++G+TS AS + YLD   V++GS  GDSQ+IK+  +       +E+++
Sbjct: 240  DARHKVRSWKLDIIGKTSRASVLVYLDAGYVFVGSHQGDSQVIKIAERS------MEIVQ 293

Query: 344  RYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIGINEQA 392
             + N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G+ +  
Sbjct: 294  TFSNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLG 353

Query: 393  SV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS---QT 448
             + E++ I  ++SL+S     +   L+V+F++E+R+   + + E+EE  +E F S   + 
Sbjct: 354  VLGEMEHISNLFSLKSDATAQYADTLLVTFVNESRVFKFDPQGEVEE--VEEFASLALEE 411

Query: 449  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 508
             TL   +    ++VQVTSG  R+       + +EW      ++  A+AN + VL++ GG 
Sbjct: 412  TTLVAANISQGRVVQVTSGRARICDLDGGMIVSEWMPMGDQTITAASANDTHVLISLGGV 471

Query: 509  HLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVRIFSLP 566
             +V L + DG+ + + K    E +++C+ +      PS  S +  +G W +  + I SL 
Sbjct: 472  TVVSLNMTDGLQVAQQKTFGTESQVACVAL------PSDSSSVCFLGFWMNSQLAICSLD 525

Query: 567  DLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
             L  I    +  E +PRS+LL     +    L  A+ DG+++ +  +  + EL  +K + 
Sbjct: 526  TLETIKTVTISDESVPRSLLLTQVFPDQPPTLFAAMADGNVITYTFDPSSYELLGKKSIV 585

Query: 625  LGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683
            LGT+  T R     +  + VFA  + P++IY+S  +L+YS V  ++ + +CPF+S A+P 
Sbjct: 586  LGTREATFRALPRGDGIYNVFATCEHPSLIYASEGRLVYSAVTAEKATAVCPFDSEAYPG 645

Query: 684  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN-QSCAEESE 742
            S+AIA   +L I  +D  +  H++++ + E  RRI +    + F + ++K      EE  
Sbjct: 646  SVAIATSEDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKNGEEIM 705

Query: 743  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN---VYYCVGTAYVLPEENEPT 799
            +   +L+D+  F+ + TY L+  E    ++ C  +D S      + VGTAY+  +     
Sbjct: 706  LSHFKLVDEIQFKELDTYALNEEELVECVMRCELADGSGGLAERFVVGTAYLDDQNATAE 765

Query: 800  KGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 858
            +GRIL+  +  +  L+L+ E   KG    L    GK++AA+ + I LY    +      L
Sbjct: 766  RGRILILEVTPERVLKLVTELAVKGGCRCLAMCEGKIVAALIKTIVLYDVEFKTQSKPTL 825

Query: 859  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNANWMS 914
                        + +   G  I + DLMKS++++ Y+  EG + ++    AR Y   W +
Sbjct: 826  VKAATFRCSTAPIDITVNGPVITIADLMKSLAMVKYQKGEGGLPDKLVELARHYQVTWAT 885

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AV  +D + +L ++   NL  + +N EG TD+++  + +  E  LGE VNR R    V  
Sbjct: 886  AVAEIDTETFLESDAEGNLMVLSRNVEGVTDDDKRHMLISSEMLLGEMVNRIRRID-VQT 944

Query: 975  LPDSDVGQIPTVIFGTVN--------------------------GVIGVIASLPHEQYLF 1008
             PD+ V  IP    GTV                           G I +   +       
Sbjct: 945  APDAVV--IPRAFVGTVRISPLLSSLPSSYPNNPPTNHQHTQVEGSIYLFGLIAPSHLHL 1002

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNE--KKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
            L  LQ+NL  ++   G ++  ++R+F N+  +   + K F+DG+L+E FLDL      + 
Sbjct: 1003 LMTLQSNLAALVPAPGNMDFAKFRAFRNQVRQDEEEPKRFVDGELVERFLDLGAEAQAKA 1062

Query: 1067 SKTMNVS-----VEELCKRVEELTRLH 1088
             + + +      VE +   VE L RLH
Sbjct: 1063 VQGLRLGEAELDVEAVRGLVEGLRRLH 1089


>gi|391865638|gb|EIT74917.1| damage-specific DNA binding complex, subunit DDB1 [Aspergillus oryzae
            3.042]
          Length = 1135

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 351/1162 (30%), Positives = 579/1162 (49%), Gaps = 108/1162 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  HK ++V H+    F +P+E +L++AK  R+EI+ LTP GL       +Y +++ L
Sbjct: 3    YVVPIHKASSVRHALKLQFLNPEEESLVVAKANRLEIYTLTPDGLNLAASCTLYAKVSML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T+RY +C L WD+  + + T R   D++D   R +  G   +I
Sbjct: 63   ARLPAPAHSPTDHLFVGTDRYTYCTLSWDSAQNRIRTERNYVDIADPSSRESQTGNRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQV 163
            DP  R + L +Y+GL  V+P                        G+L E    R++EL V
Sbjct: 123  DPSGRFMTLEVYEGLVAVVPIVQLPARKRGRAPAVPTGPDAPKVGELGELTTARIDELFV 182

Query: 164  LDIKFLY-GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQN------------ 210
                FL+     P + +LY+DN+     K   + +++ ++     S +            
Sbjct: 183  RSSAFLHVQSGLPRLALLYEDNQ-----KKVRLMVRELNYTSATASTSADATLTHIADFA 237

Query: 211  -NLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADG 265
              LD GA  LIPVP     +LI+GE +I Y   +  + I  RP    +I  A+  VD+  
Sbjct: 238  QELDLGASHLIPVP----DLLILGETSIKYVDDDNNEIIS-RPLDEATIFVAWEGVDS-- 290

Query: 266  SRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
             R+LL D  G L  L+++     +V G K++ LG TS AS + YL   +V++GS  GDSQ
Sbjct: 291  QRWLLADDYGRLFFLMLVLDSDNQVQGWKLDHLGNTSRASALVYLGGGIVFVGSHQGDSQ 350

Query: 325  LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGA 373
            ++++       GS+ E+++   N+ PI+DF ++DL     E Q      GQ ++VT SGA
Sbjct: 351  VLRI-----GNGSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGA 404

Query: 374  YKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLR-SSTDDPFDTFLVVSFISETRILAMN 431
            + DG+LR VR+G+G+ E   + +++ I  +W L+  +  D  DT L+V+FI ETR+   +
Sbjct: 405  FDDGTLRSVRSGVGMEELGVLGDMEHITDLWGLQVQAGGDTLDT-LLVTFIDETRVFHFS 463

Query: 432  LEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 490
             + E+EE +   G      TL   +    +++QVT   V +       +  EW  P    
Sbjct: 464  PDGEVEELDHFLGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGEMVVYEWTPPNELV 523

Query: 491  VNVATANASQVLLATGGGHLVYLEIGD--GILTEVKHAQLEYEISCLDINPIGENPSYSQ 548
            +  A+AN   ++L  GG  +  L+IG    ++TE K    + ++S + +       S ++
Sbjct: 524  ITAASANDDSLVLVIGGELMTVLDIGTEAQVITEKKFGA-DSQVSGVTVPA-----SPTE 577

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAFEGIS--YLLCALGDGH 604
            +  VG      V +  L DL  +    LG  GE  PRSVL+      S   L  ++ DG 
Sbjct: 578  VCVVGFPQLAKVSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSPPTLFISMADGS 637

Query: 605  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYS 663
            ++ +        L+   K+ LG++  T +     +  + VFA  + P++IY S  +++YS
Sbjct: 638  VITYSFKTDDYSLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYS 697

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
             VN +  S +C FNS A+P S+A+A   EL I  +D  +   I+++ +G   RR+ +   
Sbjct: 698  AVNSEGASRVCHFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIGATVRRVAYSPS 757

Query: 724  SRTFAICSLKNQSCAEESEMHFVRLL--DDQTFEFISTYPLDTFEYGCSILSCSF--SDD 779
             + F I +++ +  A+ +E+   R +  D+  F  + ++ L   E   S++   F    D
Sbjct: 758  EKAFGIGTIERK-LADGAEIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKD 816

Query: 780  SNV------YYCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFN 832
             N        + VGTAY+  E  E  +GRIL+F +++G KL  +AE   KGA  +L    
Sbjct: 817  ENGREMTKDRFVVGTAYLDDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLG 876

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
             K++AA+ + I +YK +  + GT +L+           + V   G+ IVV DLMKS+ LL
Sbjct: 877  DKIVAALVKTIVIYKVVNNNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLL 936

Query: 893  IYKHEEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 948
             +K  E     ++ E AR +   W + V  +D D +L ++   NL  +R+N  G  +++R
Sbjct: 937  EFKEGENGLPDSLTEVARHFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDR 996

Query: 949  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 1008
             RLEV  E  LGE VNR R  ++      + V   P    GTV G I + A +  E   F
Sbjct: 997  RRLEVTSEISLGEMVNRIRPVNIQQL---ASVTVTPRAFLGTVEGSIYLFAIINPEHQDF 1053

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEIS 1067
            L +LQ  +   ++ +G +   ++R F +  ++  +   F+DG+LIE FL+      +EI 
Sbjct: 1054 LMRLQATMAGKVESLGEMPFNEFRGFRSMVREATEPYRFVDGELIEQFLNCEPELQEEIV 1113

Query: 1068 KTMN-VSVEELCKRVEELTRLH 1088
             ++  ++V E+   +E L RLH
Sbjct: 1114 NSVGMMNVHEVKVMIEALRRLH 1135


>gi|392864500|gb|EAS34654.2| UV-damaged DNA binding protein [Coccidioides immitis RS]
          Length = 1144

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 343/1167 (29%), Positives = 582/1167 (49%), Gaps = 109/1167 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H  ++V ++    F +P E  L++AK  R+E +L TP GL       IYG+I+ L
Sbjct: 3    YITPLHHASSVDNAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVL 62

Query: 66   E-LFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            + + R H  A D LF+ T+RY +  L WD  + +L T +   D++D   R   +G    +
Sbjct: 63   QKVPRSHSSATDLLFVGTDRYAYFTLSWDPSTCQLHTEQKYLDIADPSLRDNQSGDRSWV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF-------------------DNKGQLKEAFNIRLEELQVL 164
            DP  + + + +Y+G+  VIP                    + +  L E    R+EEL V 
Sbjct: 123  DPSGKFLTMEIYEGIISVIPIAQEPLKRPSPSAGRSSGTSEQREYLGEPLQTRIEELIVR 182

Query: 165  DIKFLY--GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEG-PWSQ------------ 209
               FL+      P I +LY++ +    +K     L+D  +  G P  +            
Sbjct: 183  STAFLHHDPTKPPRIAILYENTQGKVKLK-----LRDLIYSRGIPGGEASAAEFRDVDDL 237

Query: 210  -NNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDAD 264
             ++L+ GAD+L+PVP PL GVLI+GE+ I Y      + I  RP    +I  A+ ++D  
Sbjct: 238  YDDLELGADILVPVPLPLGGVLILGEKFIKYIDTVKNETI-TRPLEHNTIFVAWEQLD-- 294

Query: 265  GSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
              R+LL D  G L   ++I +    V   K+ LLGETS AS + +L   VV++GS  GDS
Sbjct: 295  NQRWLLADDYGRLFFFMLILNSANAVQSWKVGLLGETSRASALVHLGGGVVFLGSHQGDS 354

Query: 324  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGA 373
             +I++      +GS+ E+++   N+GPI+DF V+DL  +G          Q ++VT SGA
Sbjct: 355  HVIRIT-----EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGA 408

Query: 374  YKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNL 432
            ++DGSLR VR+G+G+ +   +  ++ I  +W L +   + F   L++SF+ E+R+   + 
Sbjct: 409  FRDGSLRSVRSGVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFSP 468

Query: 433  EDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
            + E+EE +   G      T+   +    +++QVT    R+    SR    EW +     +
Sbjct: 469  DGEVEEKDDFLGLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKI 528

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEIS--CLDINPIGENPSYSQ 548
              A++N   ++L  GG  L+  +IGD I ++  K  + + ++S   L  +PI       Q
Sbjct: 529  TAASSNDRHLVLMVGGQKLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSPI-------Q 581

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLL-CAF-EGISYLLCALGDGH 604
               +       V I  L  LN+   E LG  G+ +PRSVL+ C F +    L  A+ DG 
Sbjct: 582  ACILCFPQSAEVTIIDLTGLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVAMADGS 641

Query: 605  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYS 663
            + +F LN+    L+D  K+ LG++    +     +  + +FA  D P++IY+S  +++YS
Sbjct: 642  VFSFSLNVANYSLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASEDRIVYS 701

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
             VN  + + +C FN+ A+P ++A+A   ++ I  +D  +   I+++ + E  RR  +   
Sbjct: 702  AVNSDKATRICHFNAEAYPGAIAVATPDDIKIALVDAERTTQIQTLMINETVRRTSYSST 761

Query: 724  SRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILSCSFSDDS 780
             R F + +++       EE + HF+ L D+  F  +S + L+  E   C I +   S ++
Sbjct: 762  ERAFGLGTIQRTLVQNVEEVKSHFI-LADEIMFRQLSVFDLNPNELVECVIRTEHPSSNA 820

Query: 781  NV-------YYCVGTAYV-LPEENEP-TKGRILVFIVEDGK-LQLIAEKETKGAVYSLNA 830
             +        + VGT+ +  PEE E  TKGRILVF V+  + L+ I +   +GA  +L  
Sbjct: 821  QMGSSRPRDIFIVGTSVLDTPEEAEARTKGRILVFDVDTNRELRKICDFPVRGACRALAM 880

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
             N K++AA+ + + +      +    E++ E  +      + +   G+ I V DLMKSIS
Sbjct: 881  INNKIVAALMKTVVVLNIKKGNLYNFEIEKEASYRTSTAPVDISVTGNIIAVADLMKSIS 940

Query: 891  LLIYKHEEGA----IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 946
            L+ Y   EG     ++E AR Y   W +A   + ++ +L A+   NL  + +++ G T++
Sbjct: 941  LVEYHAGEGGQPDTLKEVARHYQTLWTTAAAPVAENEFLVADAEGNLVVLNRDTTGVTED 1000

Query: 947  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 1006
            +R R++V  E  LGE VNR  H   +   P+S V  IP     TV+G I +   +     
Sbjct: 1001 DRRRMQVTSELRLGEMVNRI-HPMDLQTSPESPV--IPKAFLATVDGSIYLFGLISPSAQ 1057

Query: 1007 LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFL----DLSRT 1061
              L +LQ+ L   +   G +   ++R+F +  ++  +   F+DG+LIE FL    D+   
Sbjct: 1058 DTLMRLQSALADFVASPGEIPFNKYRAFKSSVRQAEEPFRFVDGELIEQFLTFPPDIQEA 1117

Query: 1062 RMDEISKTMNVSVEELCKRVEELTRLH 1088
             +  +     V+V E+   +E L R+H
Sbjct: 1118 ALARMDGGGRVNVIEIKGMIEGLKRMH 1144


>gi|67516629|ref|XP_658200.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
 gi|40747539|gb|EAA66695.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
 gi|259489136|tpe|CBF89158.1| TPA: damaged DNA binding protein (Eurofung) [Aspergillus nidulans
            FGSC A4]
          Length = 1132

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 339/1153 (29%), Positives = 569/1153 (49%), Gaps = 91/1153 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y+   H+ +++ H+   +F + ++  L++AK  ++E + +TP GL  +    I+ R+  
Sbjct: 2    SYIAPIHRASSIRHALKLHFLNAEDECLVVAKANQLEFYSVTPDGLALVTSCSIFARVTM 61

Query: 65   LE-LFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGI 122
            L  L  P     D LF+ T+RY +  L WD+  +++ T R   D++D   R    G   +
Sbjct: 62   LACLPAPANSPTDHLFVGTDRYSYFTLSWDSARNQVRTERDYVDIADPSSRDARTGSRCM 121

Query: 123  IDPDCRLIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQ 162
            IDP  R + L +YDG+  VIP                        G+L E    R++EL 
Sbjct: 122  IDPSGRFMTLEIYDGMIVVIPIIQLPSKRRGRQVALPTGPDAPRIGELGEPIITRIDELF 181

Query: 163  VLDIKFLY-GCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEGPWSQNNLDNGA 216
            V    FL+     P + +LY+DN+       R +K    A  + +F         LD GA
Sbjct: 182  VRSSAFLHVQAGSPRLALLYEDNQKKVKLKVRELKYSTAAGAESEFTSIADYAQELDLGA 241

Query: 217  DLLIPVPPPLC---GVLIIGEETIVYCSA--NAFKAIPIR-PSITKAYGRVDADGSRYLL 270
              LIPVP PL    G+LI+GE +I Y  A  N   + P+   +I  A+ +VD+   R+LL
Sbjct: 242  SHLIPVPAPLAAAGGLLILGETSIKYVDADNNEIVSQPLEEATIFVAWEQVDS--QRWLL 299

Query: 271  GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL 330
             D  G L  L++     +V   ++  LG TS AS + YL   VV++GS  GDSQ+I++  
Sbjct: 300  ADDYGRLFFLMLVLRNSEVERWELHSLGNTSRASVLVYLGGGVVFVGSHQGDSQVIRIGD 359

Query: 331  QPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSL 379
            Q        +V++   N+ P++DF ++DL     E Q      GQ ++VT SGA+ DG+L
Sbjct: 360  QS------FQVIQTLSNIAPVLDFTIMDLGNRTSENQMHEFSSGQARIVTGSGAFDDGTL 413

Query: 380  RIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            R VR+G+G+ E   + +++ I  +W L+  +   F   L+V+F++ETR+   + + E EE
Sbjct: 414  RSVRSGVGLEELGVLGDMEHITDLWGLQVGSRGDFLDTLLVTFVNETRVFRFSPDGEAEE 473

Query: 439  TE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
             E   G      TL   +   ++++QVT   V +          EW       +  A+AN
Sbjct: 474  LESFLGLSLSENTLLAANLPGSRILQVTEQRVLIADIECGMTIFEWTPKNQLIITAASAN 533

Query: 498  ASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
               ++L  GG H+  L+I  +  +   K    + +IS + +       + + +  VG   
Sbjct: 534  DDTIVLVAGGKHVTVLDIQSEARVVSEKDFGADNQISGVTLPT-----TPTDVCIVGFPQ 588

Query: 557  DISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNM 612
               V +  L DL+ I+   LG  GE  PRSVL+ +   E    L  ++ DG ++ +  N 
Sbjct: 589  LAKVSVLKLQDLSHISSTSLGPAGEAFPRSVLVASVLAENAPTLFISMADGSVITYDYND 648

Query: 613  KTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
            +   L+   K+ LG++  T +     N  ++VFA  + P++IY S  +++YS VN +  S
Sbjct: 649  QDHSLSGMNKLVLGSEQPTFKKLPRGNGLSNVFATCENPSLIYGSEGRIIYSAVNSEGAS 708

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 731
             +C FNS A+P+S+A+A   EL IG +D  +   I+++P+    RR+ +    + F + +
Sbjct: 709  RICHFNSEAYPESIAVATAQELKIGLVDKERTTQIQTLPIKATVRRVAYSPSEKAFGMGT 768

Query: 732  LKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC--------SFSDDSN 781
            ++ +  S  E  +  FV L D+  F  +  + L+    G  I+ C        S   ++ 
Sbjct: 769  IERKLVSGEEIVKSQFV-LADEILFRRLDAFDLE----GEEIVECVIRAEAPESKDGEAK 823

Query: 782  VYYCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
              + VG+AY+  ++ + T G I VF V++G KL  +A++  KGA  +L     K++AA+ 
Sbjct: 824  DRFVVGSAYLGEDDGDSTLGYIRVFEVDNGRKLAKVAQERVKGACRALAVMGDKIVAALV 883

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH-EEG 899
            + + +++ + R  G  +LQ    +      + +    + I + DLMKS+ ++ Y   E G
Sbjct: 884  KTVVVFQVVPRSGGL-QLQRLASYRTSTAPVDITVTRNVIAIADLMKSVCVVEYHEGENG 942

Query: 900  A---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 956
            A   + E AR +   W + V  +  D YL ++   NL  +R+N  G  +++R RLEV GE
Sbjct: 943  APDKLVEVARHFQTVWATGVTSVAPDTYLESDAEGNLIVLRRNRSGVEEDDRRRLEVTGE 1002

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
              L E VNR R  + + +LP + V  +P     TV G I + A +  +   FL +LQ  +
Sbjct: 1003 ICLNEMVNRIRPVN-IQQLPSATV--VPRAFLATVEGSIYLYAIINPDYQDFLMRLQATM 1059

Query: 1017 RKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
                  +GG+    +R+F    ++  +   F+DG+LIE FL        EI   +  S+E
Sbjct: 1060 ASRADSLGGIPFTDYRAFRTMTRQATEPYRFVDGELIERFLTCEPAVQKEIVDIVGSSLE 1119

Query: 1076 ELCKRVEELTRLH 1088
            E+   VE L RLH
Sbjct: 1120 EVRAIVEALRRLH 1132


>gi|358380497|gb|EHK18175.1| hypothetical protein TRIVIDRAFT_80808 [Trichoderma virens Gv29-8]
          Length = 1161

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 335/1176 (28%), Positives = 584/1176 (49%), Gaps = 110/1176 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   HKPT++ H+    F SP   +L++AK  R+EI  +T +G+  +    I+G I  L
Sbjct: 3    YVAPVHKPTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVTEEGMTCLHTKVIHGTIDML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGII 123
            +  +P   A D LFI T+R ++  + W+ E+++L  + + + D ++   R + +    ++
Sbjct: 63   QRLQPKDSATDLLFIGTDRLQYFNIAWNPETNQLDAVEQTIHDSAEPYMRQSQSQNRCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFD-NKG---QLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  + + +HL++G+  V      KG   +L+    +RL EL +    FL+     P I 
Sbjct: 123  DPTGKFMAMHLWEGVLNVFRLRIRKGLTTRLEVLDQVRLTELWMKSSVFLHSRTGHPRIA 182

Query: 179  VLYQ---DNKDARHVKTYEVALKDKDFVEG---PWSQNNLDN-----GADLLIPVP---- 223
             LY+   D ++AR V  Y +   DK  V     P     LD       A +LIPVP    
Sbjct: 183  FLYKNQLDREEAR-VAVYRLTEDDKGGVSSKFDPLKDRELDQVIPDPYASMLIPVPVYEE 241

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAY-GRVDADGSRYLL 270
                          L G+L++GE  + Y  +  + ++       K Y    + DG+ Y L
Sbjct: 242  KRYHVRNNEGARAHLGGLLVVGETLLTYFDSLTYSSVCSSIEDPKIYVAWAEYDGTHYFL 301

Query: 271  GDHAGLLHLLVITHEKEK----VTGLKIELLG------ETSIASTISYLDNAVVYIGSSY 320
             D  G L LL I    E     VTG+++  +        TS AS++ Y+ N +++IGS +
Sbjct: 302  ADDYGRLDLLEIKTTNESTGVVVTGMEVHPITFQDSSRYTSRASSLVYMGNNLLFIGSHH 361

Query: 321  GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVV 368
            GDSQL+ ++++   + S V+VL    N  PI+DF ++DL  +            GQ ++V
Sbjct: 362  GDSQLLHIDIETQ-QMSLVKVLS---NNAPIMDFTIMDLGNREGDAQSGNTFSSGQARIV 417

Query: 369  TCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRI 427
               GAY+DGSLR +R+G+G+ ++  + E QG +G+++LRS   +  DT +++S ++ TR+
Sbjct: 418  AGCGAYQDGSLRSIRSGVGLEDRGLLDEFQGTRGLFTLRSVESEKVDT-VIISTLTGTRV 476

Query: 428  LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 487
            L    ++  E    +G   +++TL   +    QL+Q+T   V ++   S      W+SP 
Sbjct: 477  LRFEPDNIEELYSFQGIDLESETLLAANLPNGQLLQITPRVVNVLDPDSGTSLCSWQSPE 536

Query: 488  GYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINPIG 541
            G  +  A+AN    LL+  G  LV L + DG+   VK+A  +       +ISCL      
Sbjct: 537  GKVITAASANTKWALLSIDGSILVSLNLLDGLKAVVKNASQDSVSGQPDQISCLH---AA 593

Query: 542  ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFE--GIS- 594
             +P       +G WT  ++ +  L  L  I  E L        +PR V L       IS 
Sbjct: 594  RDP--QDFGVIGWWTSGTISVVDLATLTPIHGEPLRQTDDSSSVPRDVALVQLHPPDISG 651

Query: 595  -YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF-SSKNTTHVFAASDRPTV 652
              +L AL DG++++F +++K   ++ RK V+LG+ P  L     +    +VFA ++  ++
Sbjct: 652  PTMLVALEDGNVISFNVSVKGFSISGRKTVTLGSGPARLHVLPQADGICNVFATTEHASL 711

Query: 653  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
            IYSS  +++YS     + + + PF+S AFPDS+ ++ E  + I  +D+ +  H++++P+ 
Sbjct: 712  IYSSEGRVVYSATTADDATFVAPFDSEAFPDSIVLSTEEHIRICHVDNERLTHVKALPMS 771

Query: 713  EHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDD-------QTFEFISTYPLDT 764
            E  RR+ +    + F + C  K     EE     +RL+D+       + FE   +  L+ 
Sbjct: 772  ETVRRVAYSPGLKAFGLGCIRKELIENEEVITSTIRLVDEIIFQELGKPFELNGSASLEL 831

Query: 765  FEYGCSILSCSFSDDSNV---YYCVGTAYVL---PEENEPTKGRILVFIVEDGK-LQLIA 817
             E  C I+     D + V    + VGT++V     EE   T+GRILV  V++ + L  IA
Sbjct: 832  VE--C-IIRAELPDSNGVPAERFLVGTSFVADPGTEEAGETRGRILVLGVDESRQLYQIA 888

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 877
                KG    L   +  ++A + + + +Y +         L            + +   G
Sbjct: 889  SHNLKGVCRCLAIMDDYIVAGLTKTVVVYGYTQETSTAASLNKLASFRPASFPIDLDVSG 948

Query: 878  DFIVVGDLMKSISLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            + I +GDLM+S++L+ +      ++  +EE+AR Y   W ++V  LD+  +L A+   N+
Sbjct: 949  NIIGIGDLMQSLTLVEFTPGQDGKKPTLEEKARHYQQAWTTSVSALDESRWLEADAQGNI 1008

Query: 934  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
              +R+N E  T+++R +LE+  E ++GE +NR R    +   P  +   IP    G++ G
Sbjct: 1009 IVLRQNQEAPTEQDRSQLEITSELNIGEQINRIRK---IQVAPAENAIVIPKAFLGSIEG 1065

Query: 994  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLI 1052
             + +   +  +    L   Q+ L++ I+  G L+ + WR+F N+ +  +A   F+DG++I
Sbjct: 1066 TLYLYGDIAPKYQDLLMTFQSRLQEYIQTPGNLSFDTWRAFRNQARDGEAPFRFVDGEMI 1125

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            E FLDL   + + + + +  SVE++   +EEL R+H
Sbjct: 1126 ERFLDLDEKQQELVCEGLGPSVEDMRNMIEELRRMH 1161


>gi|255956643|ref|XP_002569074.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590785|emb|CAP96985.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1140

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 344/1162 (29%), Positives = 571/1162 (49%), Gaps = 103/1162 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ H+   NF SP E  L+ A   R+E + LT  G+       +  R+  L
Sbjct: 3    YVVPIHRASSIRHAVKLNFFSPDEECLVAA---RLEFYTLTADGIVLTATRALNARVTML 59

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D LF+ T++Y +  + WD ES+++ T R+  D+++   R +      +I
Sbjct: 60   ARLPAPTNSPTDHLFVGTDQYNYFTITWDRESNQIKTARSCVDIAEPSSRESQCAPRCLI 119

Query: 124  DPDCRLIGLHLYDGLFKV---------------------IPFDNKGQLKEAFNIRLEELQ 162
            DP  R + L +Y+G+  V                     +P    G+L +    R++EL 
Sbjct: 120  DPTGRFMTLEVYEGVIVVVPIVQPTKKRGRMSMGGPQADLPL-QVGELDKPTTSRIDELF 178

Query: 163  VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEV--------ALKDKDF-----VEGPWSQ 209
            V    FL+  + P + +LY+DN+    ++  E+         L D  F     +EG    
Sbjct: 179  VRSSAFLHSESNPWLALLYEDNQQKVRLRIRELDFTPGTAGTLADATFKEVQKLEGGEFG 238

Query: 210  NNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDADGS 266
              LD G+  LIP+P PL G++++GE +I Y   NA   I       ++  A+ +VD+   
Sbjct: 239  QELDLGSSHLIPIPAPLGGLIVLGETSIKYIDDNANDVITRNLDEATVFVAWEKVDS--Q 296

Query: 267  RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
            R+LL D  G L  L  I +   ++   K+E LG+TS AS + YL   ++++GS +GDSQ+
Sbjct: 297  RWLLADDYGRLFFLSFILNNMGEIDDWKLEYLGKTSRASVLVYLGGGMLFVGSHHGDSQV 356

Query: 326  IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAY 374
            ++L+      GS  EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+
Sbjct: 357  LRLD------GSSFEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAF 410

Query: 375  KDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
             DG+LR VR+G+G+ E   + E++ I   W L++ + D F   L+V+F+ ETR+   + +
Sbjct: 411  DDGTLRSVRSGVGMEELGVLGEMEHITDFWGLQTRSKDDFLNTLIVTFVDETRVFQFSTD 470

Query: 434  DELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
             E+EE +   G      TL       ++++QVT   V +    S  +  EW       + 
Sbjct: 471  GEVEELDNFLGLSLTECTLLVTRLQGDRILQVTEQRVLVADLESGMVTFEWAPQDQKLIT 530

Query: 493  VATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDI--NPIGENPSYSQI 549
             A+AN   ++L   G  +   +I D + +   K    + +IS L +  +P G       +
Sbjct: 531  AASANEDHLVLVISGQIVASFDIRDNVQIITQKDLGADQQISGLTVPSSPTG-------V 583

Query: 550  AAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAFEGISY--LLCALGDGHL 605
               G      V I ++ D  ++  + LG  GE  PRSVL+      S+  L  ++ DG +
Sbjct: 584  FIAGFPQSAKVSIMAIKDFAILQTKSLGPTGESFPRSVLVAEVLADSHPTLFISMADGCV 643

Query: 606  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSN 664
            + F LN +   L++  K+ LG++  T +     +  + VFA  + P++IY S  +++YS 
Sbjct: 644  ITFSLNPQDYSLSEMNKLILGSEQPTFKKLPKGDGLYNVFATCENPSLIYGSEGRIIYSA 703

Query: 665  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 724
            VN +  S +C  N+ AFPDS+A+A E EL I  +D  +   I+++P+G   RR+ +    
Sbjct: 704  VNSEGASRVCHLNAEAFPDSIAVATEKELKIALVDKERTTQIQTLPMGSTVRRVAYSPSE 763

Query: 725  RTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF--SDDS 780
            + F I ++  +  + AE  + HFV L D+  F  +    L   E   S++        D 
Sbjct: 764  KAFGIGTIDRKLVNGAEVVKSHFV-LADEIMFRRLDALELGPDELVESVVRAELPAGKDE 822

Query: 781  NV------YYCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNG 833
            N        + VGTA+   E++E  +GRIL+  V+ G KL  +AE    GA  +L     
Sbjct: 823  NGKEIMKDRFVVGTAFADEEQDESIRGRILILEVDHGRKLSQVAELPVMGACRALAMMGD 882

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
             ++AA+ + + +Y+  + + G  +L+    +      + V    D I V DLMKS+ L+ 
Sbjct: 883  CVVAALVKTVVVYRVKINNVGPMKLEKLAAYRTSTAPVDVIVVDDLIAVADLMKSLCLVR 942

Query: 894  Y----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 949
            Y      E   + E  R Y   W +A+  + D+ +L ++   NL  + +N  G T +++ 
Sbjct: 943  YTPGHAGEPAKLTEVGRHYQTVWSTAIACVGDETFLQSDAEGNLIVLSRNMNGVTAQDKH 1002

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPD-SDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 1008
            RL    E  LGE VNR R     + +P  S V   P     TV G I + A +  E   F
Sbjct: 1003 RLMPTSEISLGEMVNRIRP----VNIPQLSSVMVTPRAFMATVEGSIFLFAVINPEHQDF 1058

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEIS 1067
            L  LQ +L   I  +G L+ +++RSF    ++ +A   F+DG+LIE FL+ S +  +EI 
Sbjct: 1059 LMTLQASLSTKINSLGNLSFDKFRSFRTMVRSAEAPYRFVDGELIEQFLNCSPSMQEEIV 1118

Query: 1068 KTMNVS-VEELCKRVEELTRLH 1088
            + +  S V E+ + +E L RLH
Sbjct: 1119 QEIGSSDVVEVKRMIEALRRLH 1140


>gi|336470789|gb|EGO58950.1| hypothetical protein NEUTE1DRAFT_145059 [Neurospora tetrasperma FGSC
            2508]
 gi|350291855|gb|EGZ73050.1| hypothetical protein NEUTE2DRAFT_156600 [Neurospora tetrasperma FGSC
            2509]
          Length = 1158

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 344/1174 (29%), Positives = 578/1174 (49%), Gaps = 109/1174 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   H+P++V H+   N  SP+E +LIIAK  RIEI  L    L  +    I G I  L
Sbjct: 3    YVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLADGHLFMIHSKVINGTITIL 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  +P     D LF+ T+++++   +WD E+ +L T     D  +R  R + +    I+D
Sbjct: 63   QKLQPKDHPTDLLFVGTDQFEYFTAEWDRETQQLKTLNRFSDPGERHMRDSQSQNKCIVD 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNI----RLEELQVLDIKFLYG-CAKPTIVV 179
            P  R + +HL++G+  V    N+       +I    RL EL +    FLY     P +  
Sbjct: 123  PSGRFMAMHLWEGVLSVWRLGNRKNTATTLDILVQVRLSELFIKGSTFLYTETGIPKVAF 182

Query: 180  LYQDNKDARHVK--TYEVALKDKDFVEGPWSQNN--------LDNGADLLIPVP------ 223
            LY++  ++   K  TY +   D+      +             D GA +LIPV       
Sbjct: 183  LYRNQANSNETKLATYRLTSDDRHTEISKFDPTRDREIDADVEDPGAGILIPVKKVEEEV 242

Query: 224  ------------PPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRVDADGSRY 268
                        P + G++++GE  ++Y    +    ++     SI  A+   D   + Y
Sbjct: 243  KRHHFRNTEQAKPHVGGLIVVGETRLLYIDEVTKTQVESALREASIFVAWAEYDP--THY 300

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
             L D  G LHLL I  E   VTG+ +  +G+T+ A  ++YL + ++++GS YG+SQL +L
Sbjct: 301  FLSDDYGNLHLLTILTEGAVVTGMDVSNIGKTARAHVLTYLGDDMLFVGSHYGNSQLYRL 360

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKD 376
            NL  +     +++++   N+GPI DF V+D+  +            GQ ++VT SG +KD
Sbjct: 361  NLLSEDLSEILQLVQVLENIGPITDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKD 420

Query: 377  GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            G+LR VR+G+G+ + A + ELQ  + ++SL+S      DT LV SF+++TRI   +   E
Sbjct: 421  GTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSPRVDT-LVASFLTDTRIFKFDPHGE 479

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE +   G   Q QTL   +    QL+QVT+ +  L+ + S      W       +  A
Sbjct: 480  IEEVDNYYGMDLQHQTLLATNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDRQIINA 539

Query: 495  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYSQIAAV 552
            +AN   +LL+  G  LV + I D  LT V+   +  + +I+C+ +      P  S +  V
Sbjct: 540  SANKHWLLLSVQGTTLVSINI-DNDLTVVQEKDISEQDQIACIHV-----APQLSDVGVV 593

Query: 553  GMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF----EGISYLLCALGDGH 604
            G WT  +V I  +  L  I  E L        IPR ++L        G++ L  A+ DG+
Sbjct: 594  GFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPRDLVLAKVLPNAPGMT-LFIAMEDGN 652

Query: 605  LLNFLLNMKTGE---LTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKL 660
            ++ F      GE    + RK V LGT+         ++  + +FA ++ P++IY S  ++
Sbjct: 653  VVTF----NIGEDLTFSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYGSEGRI 708

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            +YS V  ++ + +CPF+S AFP ++ ++ E E+ I  ID  ++ H+RS+ LGE  RRI +
Sbjct: 709  IYSAVTAEDATCVCPFDSEAFPGAVILSTENEIRISEIDTARQTHVRSLELGEMVRRIAY 768

Query: 721  QEQSRTFAICSLKNQSCAEESEMH-FVRLLDDQTFEFIST-YPLDTFEYGCSILSCSFSD 778
                + F +  ++ +    E  +H   +L+D+  F  +   + L T  Y   +     ++
Sbjct: 769  SPSEKGFGLGCIRREVVNGEEIIHSSFKLVDEILFARVGKEFMLGTSSYSELVEDVIRAE 828

Query: 779  DSNVY------YCVGTAYVL-PEENEPT--KGRILVFIVEDGK-LQLIAEKETKGAVYSL 828
              + Y      + VGT+++  P+    T  +GRILVF ++  +   L+ + E KG   +L
Sbjct: 829  LPDSYGNLVERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELKGGCRAL 888

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
                 K++AA+++ + + ++         L     +      + +   G+ I V D+MKS
Sbjct: 889  AVMGSKIVAALHKTVVISQYEETSSTEAHLVKLASYRCTTYPVDIAVHGNIIAVADMMKS 948

Query: 889  ISLLIY--------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
             +L+ Y        K E   + E AR  ++ W +AV  ++ + +L A+ N NL  +++N+
Sbjct: 949  ATLVEYVPAKTGGEKSEAPKLVECARHRHSAWATAVAHVEGESWLEADANGNLIVLQRNA 1008

Query: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
            EG T E++ +L +  E +LGE VN+ R    V   P++ +  IP     T  G I +  +
Sbjct: 1009 EGVTVEDQRQLRITSELNLGEQVNKIRPIK-VETSPNAII--IPRAFLATAEGGIYMFGT 1065

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK------NFLDGDLIES 1054
            +  EQ L L + Q  L  VIK VG L+   +R+F N ++  +A        FLDG+L+E 
Sbjct: 1066 IVREQDLLL-RFQDKLAAVIKTVGELDFNSYRAFRNAERGPEADGTTGPVRFLDGELLER 1124

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            FLD+      EI + +  SVE++   VEEL R+H
Sbjct: 1125 FLDVDEKTQKEICEGLGPSVEQMRNMVEELRRMH 1158


>gi|406865227|gb|EKD18269.1| CPSF A subunit region [Marssonina brunnea f. sp. 'multigermtubi'
            MB_m1]
          Length = 1146

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 350/1159 (30%), Positives = 576/1159 (49%), Gaps = 89/1159 (7%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPML-DVPIYGRIA 63
            +Y+   H+P++V H+      S  +  L++ +  RIEI      G   ML   PIYG I 
Sbjct: 2    SYLAPIHRPSSVRHAVKLCLVSEDQECLVLGRGNRIEIWQSGEHGSLTMLTSKPIYGTIT 61

Query: 64   TLELFRPH-GEAQDFLFIATERYKFCVLQWDAESSELITRA-MGDVSDRIGRPTDNGQIG 121
             L   RP    + D LF+ T R+++  L ++ E+  L TR    DVS+R    + +  + 
Sbjct: 62   MLAKIRPEIAHSADQLFVGTSRFQYFTLAYNQETQALETRQNFVDVSERHMIDSQSRDLV 121

Query: 122  IIDPDCRLIGLHLYDGLFKVI-PF-DNKGQ---LKEAFNIRLEELQVLDIKFLYG-CAKP 175
            ++DP  + + L L++G+     P    KG+   L +   +R+ EL+V    FLY    +P
Sbjct: 122  LVDPAGKYVVLELFEGILSCFKPLRPRKGREDVLDKPEQVRITELRVRATTFLYTETQQP 181

Query: 176  TIVVLYQDNKDAR-HVKTYEVALKDKDFVEGPWSQN------NLDNGADLLIPVP----- 223
             I +L++D       + TY +  +         S++      +LD GA  LIP+P     
Sbjct: 182  KIALLFEDGSGGEVRMATYRLVDEKGTLSRFDPSKDRENEISDLDPGASHLIPIPKNAGQ 241

Query: 224  ------------PPLCGVLIIGEETIVYC---SANAFKAIPIRPSITKAYGRVDADGSRY 268
                          L GV+++GE    Y    S  AF       +I  A+ +VD    RY
Sbjct: 242  KRYIVRNSTVAKAHLGGVVVVGETKFTYLDDESKAAFDYPLNDAAIFVAWVKVD--DQRY 299

Query: 269  LLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            LLGD  G LHLL ++++   +V G+ + LLG  S A+T+  L + V ++GS   +SQ+I+
Sbjct: 300  LLGDDYGNLHLLSILSNHDGEVMGMDLMLLGTISKATTMVNLGDGVFFVGSHEAESQVIR 359

Query: 328  LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKD 376
            ++L  D K  Y+ +++   N+ PI+D  V+D+     E Q      GQ ++VT SGA++ 
Sbjct: 360  VDL--DRKDHYITIIQTMQNIAPILDLAVMDMGNREGESQSNEYSTGQTRLVTGSGAFQS 417

Query: 377  GSLRIVRNGIGINEQASV--ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 434
            GSLR VR+G+G+ +   +  E+  I+ ++S+RS+    FD  LVVS  +ETR+     E 
Sbjct: 418  GSLRSVRSGVGLEDIGILVDEIGDIRDVYSMRSTAGTHFDDILVVSLPTETRVFTFLGEI 477

Query: 435  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            E E  E  G     QTL         ++QVT  SV+++      +  +W  P G  +  A
Sbjct: 478  E-EVAEFRGLELNCQTLLASGLSNGMMLQVTESSVKILGPGPSYVAAKWTPPAGEYITDA 536

Query: 495  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY--EISCLDINPIGENPSYSQIAAV 552
            +AN S VL++  G  LV L+IG G L EV    LE   +++C+ +       + S I  V
Sbjct: 537  SANDSYVLVSVSGTTLVSLDIGQG-LKEVAVQPLEAADQVACVYVPR-----NLSDIGVV 590

Query: 553  GMWTDISVRIFSLPDLNLITKEHL---GGEIIPRSVLLC----AFEGISYLLCALGDGHL 605
            G W   S+ I +L +L +I  E L       IPR ++L     A      L  A+ DG +
Sbjct: 591  GFWKSGSISILNLSNLEIILSEDLRRKNNASIPRHIILAQLLPAVAAGPTLFVAMEDGVV 650

Query: 606  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSN 664
            L F ++  T  L+ RK + LGT+         +    +V A  + PT+IY+S  +++YS 
Sbjct: 651  LTFNVDKSTFSLSGRKSLVLGTEHAKFHLLPREGGLNNVLATCEHPTLIYASEGRIVYSA 710

Query: 665  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 724
            V   +    CPFNS  +P SL +A +  L I  IDD ++ H+R++ +G+  RRI +    
Sbjct: 711  VTADDAKCACPFNSEEYPGSLVVATQRSLKISKIDDERQTHVRTVHIGKTVRRIAYSGAE 770

Query: 725  RTFAI-CSLKNQSCAEESEMHFVRLLDDQTF-EFISTYPLDT------FEYGCSILSCSF 776
            R F I C  +  +  EE       L++D  F E  +  PLD        EY       + 
Sbjct: 771  RAFGIGCIERTMADKEERYTSTFSLVEDVKFAEVGNPVPLDDENGTELIEYIIRTEVLNA 830

Query: 777  SDDSNVYYCVGTAYVLPEENEPT-KGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGK 834
             +D    + VGT+++  E  +P  KGRILVF ++  K   L+A    K A   +   +GK
Sbjct: 831  REDLAERFIVGTSFLDEESADPNIKGRILVFGIDPKKNPYLVASLNLKCACRRVAMLDGK 890

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
            ++A +N+ + ++K++   +   E +         + + +    + I + D+M+S+S++ Y
Sbjct: 891  IVAVLNKTVAMFKYVEITEKAGEFKKLATFRSSTVPIDIAITENIIAITDMMQSVSIVQY 950

Query: 895  K-HEEG---AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 950
               +EG    +E+ ARDY   W +AV  + D+ +L ++++ NL  +++N +G T E++ R
Sbjct: 951  TPGKEGMPDKLEQVARDYQTCWGTAVTDIGDNSWLESDHHGNLLVLQRNIDGITLEDKQR 1010

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLE 1010
            L + GE +LGE VN  R  ++    P      +P     T  G I + +++       L 
Sbjct: 1011 LRITGEMNLGEQVNMIRKIAID---PSPTAMVVPKAFLATTEGSIYLFSTILDGSQDLLL 1067

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
            +LQ N+ + +  +G L+ + +RSF + E+ T +   F+DG+LIE FLD S     +I + 
Sbjct: 1068 RLQENITECVDTLGRLDFKTYRSFKSAERTTEEPYRFVDGELIERFLDESEDMQQQICEG 1127

Query: 1070 MNVSVEELCKRVEELTRLH 1088
            +  +VE +   VE L RLH
Sbjct: 1128 LGYTVEAIRDVVENLKRLH 1146


>gi|171691144|ref|XP_001910497.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945520|emb|CAP71632.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1158

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 340/1170 (29%), Positives = 579/1170 (49%), Gaps = 101/1170 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVP-IYGRIAT 64
            Y+   H+P++V H+ + N  S +E +L++++  R+E+   +P GL        + G IA 
Sbjct: 3    YIAPIHRPSSVDHALLANVYSEEEQSLVLSRTNRVEVWRPSPDGLLSQAHTTNVNGTIAM 62

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL-ITRAMGDVSDRIGRPTDNGQIGII 123
            L+  RP     D LF+ T+R+++  L W+ E+S++  T A  D  +   R + +    I+
Sbjct: 63   LQKLRPKDAETDLLFVGTDRFEYFTLYWNPETSQMETTNATRDPGEHFMRNSQSLDRAIV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF----DNKGQLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  R I +HL++G+  +        N  QL     IRL EL +    FL+     PT+ 
Sbjct: 123  DPSGRFIAMHLWEGVMTIARLGTRKTNAAQLDWMGQIRLAELFIKASTFLHNETGHPTVA 182

Query: 179  VLYQDNKDARHVK--TYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV------ 222
             LYQ + +A+  K  TY +   D++ V   ++            D GA++LIPV      
Sbjct: 183  FLYQTSANAQDSKLATYRLTSDDRNTVASEFNAQKHRIIDITIADAGANMLIPVRKVEEE 242

Query: 223  ------------PPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRV---DADGSR 267
                         P L GV+++GE  ++Y   +  KA  +   + KA   V   + +   
Sbjct: 243  VKRHNFRNTGSAKPHLGGVIVVGETRLLYID-DVTKAT-VESKLDKASIFVKWAEYNVQT 300

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            Y L D  G LHLL I  +  +V G+ +  +G TS AS + YL N ++++ S +GDS+L +
Sbjct: 301  YFLADDYGSLHLLTINTDGAEVKGMVLTKIGVTSRASELVYLGNEMLFVASHHGDSRLFQ 360

Query: 328  LNLQPD--AKGSYVEVLERYVNLGPIVDFCVVDLERQG-------------QGQVVTCSG 372
            L+L  D  A   ++ +++   N+GPI+DF V+D+  +G             Q ++V  SG
Sbjct: 361  LDLSADKPADKPFLTLIQTISNIGPIMDFAVMDMGNRGGEDSQLGNEYSSGQARIVCGSG 420

Query: 373  AYKDGSLRIVRNGIGINEQASVEL----QGIKGMWSLRSSTDDPFDTFLVVSFISETRIL 428
             YKDGSLR VR+G+G+ E   + L    Q ++G++SLR +  +     L VSF++ETR+ 
Sbjct: 421  VYKDGSLRSVRSGVGL-EDVGLLLEDLGQHVRGVFSLRGAVGEGKMDTLAVSFLTETRVF 479

Query: 429  AMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 487
              + E  +EE  +  GF    QTL   +     ++QVT+  V L+ + S      W    
Sbjct: 480  KFDSEGGVEEVGDFMGFGLDCQTLLARNLGGGMILQVTTRGVVLIDAESGVTVATWVPRD 539

Query: 488  GYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPS 545
              ++  A+AN   +LL+  G  LV +      L  VK   +  + +++C+ + P      
Sbjct: 540  ENTIINASANGEWLLLSVEGTGLVSISTAGNELRLVKEKDISQQDQVACIHVAP-----Q 594

Query: 546  YSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC--AFEGIS--YLL 597
               I  VG WT  +V I  L  L  +  E L        IPR V+L   A   +S   L 
Sbjct: 595  LQGIGVVGFWTSGTVSIIDLNTLEPMHGESLRQSQDDASIPREVVLVQVASPKVSGPTLF 654

Query: 598  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT--HVFAASDRPTVIYS 655
             A+ DGH++ F ++    E + +K+V LGT+   L      N +   + A ++ P++IY 
Sbjct: 655  IAMEDGHVVTFNISADF-EFSGKKQVILGTRQARLHLLPQDNDSIYSILATTEHPSLIYG 713

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 715
               +++YS V  +E   +CPF++ AFPDS+ +A + ++ I  ID  ++ H+R +P+GE  
Sbjct: 714  EENRIVYSAVTAEEAMFICPFDTEAFPDSIIVATDTQIKISKIDRTRRTHVRELPMGEMV 773

Query: 716  RRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTFEYGCSILS 773
            RRI +  + + F + C  ++    +E      RL+D+  F+ +  T+ L+   Y   + +
Sbjct: 774  RRIAYSPKEKVFGLGCIKRSLVDGDEVVQSSFRLVDEVIFQPVGKTFQLERTNYVELVEA 833

Query: 774  CSFSDDSNVY------YCVGTAYVLPEENEPT----KGRILVFIVEDGK-LQLIAEKETK 822
               ++  + Y      + VGT++ LP+ +       +GRILVF ++D K   LI    TK
Sbjct: 834  VVRAELPDSYGNPAERFIVGTSF-LPDPDYAMTGEHRGRILVFGIDDNKDPYLILSHLTK 892

Query: 823  GAVYSLNAFNG-KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 881
            G    L   +G K++A + + + + ++      T  L     +      + +  +G+ I 
Sbjct: 893  GVCRCLEVLDGNKIVAGLAKTVAIARYDETSTTTATLTRLASYKPSTHPIQIAAQGNIIG 952

Query: 882  VGDLMKSISLLIY-KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
            V D+MKS++L+ Y   ++  + E AR + +   +A+  +D D +L A++  NL  +R+N+
Sbjct: 953  VADVMKSMTLVEYMPGDKDRLVEVARHWQSAAGTALCHVDGDDWLEADDQGNLMMLRRNA 1012

Query: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ-IPTVIFGTVNGVIGVIA 999
            +    E+R  + V  E +LGE VNR R     +R+  S     +P    GTVNG I +  
Sbjct: 1013 DAVVMEDRKIMSVTAEMNLGEMVNRIR----AVRVETSRGAMVVPRAFLGTVNGGIYMFG 1068

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDL 1058
            ++  E    L + Q  L +V+   G +    +R+F N E++  +   FLDG+L+E FLD 
Sbjct: 1069 TVAPEAQDLLLRFQEKLARVVHTAGEIEFNCYRAFRNAEREGSEPVRFLDGELLERFLDQ 1128

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
                  EI + +  S+E +   VEEL R+H
Sbjct: 1129 DEATQREICEGLGPSLEHMRNVVEELRRMH 1158


>gi|358056808|dbj|GAA97158.1| hypothetical protein E5Q_03834 [Mixia osmundae IAM 14324]
          Length = 1243

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 347/1211 (28%), Positives = 572/1211 (47%), Gaps = 170/1211 (14%)

Query: 25   TSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATER 84
            T P + NLI++K  RIE+H + P GL+  L++P++G I  L+  R    +   L + T  
Sbjct: 56   TEPAQ-NLILSKLNRIEVHTIEPTGLRLALEIPLFGTILDLQPIRFKDRSTSSLLLLTTS 114

Query: 85   YKFCVLQWDAE--SSELITRAMG------------DVSDRIGRPTDNGQIGIIDPDCRLI 130
              F VL ++ +  +    TR++G             VS+R GR ++  Q  ++DP  R +
Sbjct: 115  LHFSVLTYEPDFLTPASGTRSLGWSNARVQDEATLSVSERAGRQSEEAQTILVDPHNRCV 174

Query: 131  GLHLYDGLFKVIPFDNKG------------------------------------------ 148
             LH+Y GL +V+P  +                                            
Sbjct: 175  LLHIYCGLIRVLPIKSSAGAASKPSRRRSSAAAPVGELSSSLKKSSGKARASAAASAESD 234

Query: 149  --QLKEAFNIRLEELQVLDIKFLY--GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVE 204
               +  ++NIRL  L V  I FL     + PTI +L+ +      +  + ++LKDK+ V 
Sbjct: 235  GIDVFRSYNIRLPYLNVKHIAFLPLPESSLPTIALLHTNFLGQNVLSIHAISLKDKELVN 294

Query: 205  GPWSQNNL---DNGADLLIPVPPPLC-----GVLIIGEETI------------------- 237
                   L   D   DL IP+   L      G+L++G   I                   
Sbjct: 295  SAKPDFELVLDDETVDLFIPLERNLATGQPLGLLLVGSGQINWLPLPLLDTIASPPISPT 354

Query: 238  ---------VYCSANAFKAIPIRPS-----------------------ITKAYGRVDADG 265
                     V  +A+  ++ P  P+                       I + Y  +D D 
Sbjct: 355  TARRASISSVSTNASGRRSAPPSPTNTRKSKGKERASDRRVTSKVPVGIYRTYCAIDHDP 414

Query: 266  SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
            S  L+GD  G L  + I  + E+VT L +  LG+    ++++++ +  V++GS YGDS L
Sbjct: 415  SLLLVGDEEGYLVSVRIGLQGERVTSLDVVDLGKVPSPTSLTHIADEYVFVGSYYGDSSL 474

Query: 326  IKL-NLQPDA-KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383
            + +  L  D  +   V V+    NL PIVDFCVV  +  GQ  +VTCSGA   GSLR+VR
Sbjct: 475  VAIPALTSDGMECDSVSVISAMANLAPIVDFCVVT-DDVGQSHLVTCSGAKNSGSLRLVR 533

Query: 384  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM---NLEDELEETE 440
             G+G++  A+++L  ++  W L+ ++       ++VSF+  +++L++   NL      +E
Sbjct: 534  QGVGLSILATIDLPAVQNAWPLKLASSSIKHDAILVSFLDRSQLLSLCNGNL------SE 587

Query: 441  IEGFCSQTQTLFCH---DAIYNQLVQVTSGSV-RLVSSTSRELRNEWKSPPGYSVNVATA 496
            +        TL+     DA     +  T+ ++ RL      EL   W SP G  +  A++
Sbjct: 588  LASPALTEPTLYAGTLGDAGAQVAICATAKAILRLSIEKPSEL---WTSPTGDLITAASS 644

Query: 497  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
            + S +LLAT    LV + +    +      Q   E+SCL         + SQIAAV  W+
Sbjct: 645  DGSSLLLATSSKALVLMTLSPNGIALTTTKQTISEVSCL---AAWTTTTGSQIAAVASWS 701

Query: 557  DISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS-YLLCALGDGHLLNFLLNMKTG 615
              ++ ++SLP L  +T   L  + +P+S+L   FE  + +L   LG G L++F ++  +G
Sbjct: 702  TNAILLYSLPHLEPVTGAELSFDHLPQSMLFQKFEDDAVHLFVGLGSGDLISFGIDAASG 761

Query: 616  ELT--DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 673
             +    RK V+LG +P+ L   S+     VFA +DRPTV+  S  +L Y++ N + +  +
Sbjct: 762  AVLPLSRKSVTLGKKPVLLSQCSAAGQPAVFAVTDRPTVVSRSAGRLSYASDNRRTLVAI 821

Query: 674  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE-HPRRICHQEQSRTFAICSL 732
               ++  F  SL +     +     D  + LH+RS+ LGE  PR+I H  + R +A+  L
Sbjct: 822  NQIDALRFEQSLMLVSPEGIQFARADGNESLHVRSLSLGELQPRKIAHSAELRAYAVLCL 881

Query: 733  K---NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA 789
            +   ++S    +    V+ +D   F  + ++ L + E+G ++ + S       ++ VGTA
Sbjct: 882  QETIDRSTGHLTRAGSVQFVDASDFALLDSFDLQSDEHGTALETVSL--HGAAHFAVGTA 939

Query: 790  YV--LPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI-NQKIQLY 846
            +     +  EP KGR+L F+ +  K +       +G V+ L       LAAI N +++++
Sbjct: 940  FSDRTVDAREPKKGRVLTFMRDGDKFEQHVHAVLEGGVFGLCQLPNSFLAAIANAQVKVF 999

Query: 847  KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
                  +     Q  C   G  LA  + +R   I+VGDL +S+ LL +   +  + E AR
Sbjct: 1000 HVT---EQAHIDQMTC-WAGTFLAQSISSRDSQIIVGDLYRSVVLLQWDEAKDTLSEVAR 1055

Query: 907  DYNANWMSAVEIL--DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
            +++ N MSAVE L   DD Y+G E   N+FT+ K     T E    LE  G +H+GE+V 
Sbjct: 1056 EHHVNGMSAVEFLGFTDDRYIGTEQELNIFTLTKTK---TRERIDILETEGMFHIGEYVT 1112

Query: 965  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 1024
            R R G+LV    D+  G  P ++FGT +G +GVI +   E  L L  L+ N+R VI+  G
Sbjct: 1113 RIRKGALVPGYTDTSFGAAPQLLFGTSDGSLGVIVNCTPEVSLKLFALERNMRAVIRAFG 1172

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI-------SKTMNVSVEEL 1077
            GL    WR+F    +  +   F+DGD+I  F +L+ T+++++       S   N + E+L
Sbjct: 1173 GLEQVDWRAFRAPHRVHEPVGFVDGDMIGRFAELNETQVNQVLQGASEHSALTNTTAEDL 1232

Query: 1078 CKRVEELTRLH 1088
             + V+EL R+H
Sbjct: 1233 YRLVDELQRMH 1243


>gi|340521192|gb|EGR51427.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1161

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 331/1177 (28%), Positives = 583/1177 (49%), Gaps = 112/1177 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   HKPT++ H+    F SP   +L++AK  R+EI  +  +G+  +    I+G I  L
Sbjct: 3    YVAPVHKPTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVHEEGMTCLHTKVIHGTIDML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGII 123
            +  +P   A D LFI T+R ++  L W+ E+++L  + + + D ++   R + +    ++
Sbjct: 63   QRLQPKDSATDLLFIGTDRLQYFNLAWNPETNQLDAVEQTIEDTAEPYMRQSQSQNRCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFD-NKG---QLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  + + +HL++G+  V      KG   +L+    +RL EL +    FLY     PTI 
Sbjct: 123  DPTGKFMAMHLWEGVLNVFRLRIRKGLTTKLEGLDQVRLTELWMKASTFLYSRTGHPTIA 182

Query: 179  VLYQ---DNKDARHVKTYEVALKDKDFVEGPWS-QNN-------LDNGADLLIPVP---- 223
             LY+   D ++AR +  Y +   DK  V   +  Q N        D  A +LIPVP    
Sbjct: 183  FLYKNQLDREEAR-IAVYRLTEDDKPGVSSKFDPQKNRDFEEVIRDPYASMLIPVPVYEE 241

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFKAIP---IRPSITKAYGRVDADGSRY 268
                          L G+L++GE  + Y  +  + ++      P I  A+   + DG+ Y
Sbjct: 242  KRYHVRNNEGARAHLGGLLVVGETLLTYFDSLTYSSVCSSLAEPKIYVAWA--EYDGTHY 299

Query: 269  LLGDHAGLLHLLVITHEKEK----VTGLKI------ELLGETSIASTISYLDNAVVYIGS 318
            LL D  G L +L I    E     VTG+++      +L   TS AS++ Y+ N +++IGS
Sbjct: 300  LLADDYGRLDMLEIKTTNESTGVVVTGMEVHPFAFEDLSRYTSRASSLVYMGNNLLFIGS 359

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
             +GDSQL+++    D +   + +L+   N  PI+DF ++DL  +            GQ +
Sbjct: 360  HHGDSQLLRI----DIETQQMTLLKVLPNNAPIMDFTIMDLGNREGDAQAGNTFSSGQAR 415

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
            +V   GAY+DGSLR +R+G+G+ ++  + E  G +G+++LRS   +  DT +VVS ++ T
Sbjct: 416  IVAGCGAYQDGSLRSIRSGVGLEDRGLLDEFPGTRGLFTLRSVDSEKVDT-VVVSTLAGT 474

Query: 426  RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 485
            R+L    E   E    +G   +++TL   +    QL+Q+T   V L+   S      W+S
Sbjct: 475  RVLRFEPESIEEVYSFQGMDLESETLLAANLPNGQLLQITPRVVTLLDPESGASLCSWQS 534

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINP 539
            P G  +  A+AN    LL+  G  LV L + DG+   V+ A          +ISC  I+ 
Sbjct: 535  PDGKVITAASANTKWALLSIDGSLLVSLNLLDGLKAVVQDASENPVSGQPDQISC--IHA 592

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY 595
              + P +     VG W   ++ +  L  L  +  E L        +PR V L        
Sbjct: 593  ARDPPDF---GVVGWWASGTISVVDLATLTPLHGESLRQTDDSASVPRDVALVQLHPPDM 649

Query: 596  ----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRP 650
                LL AL DG++++F +++K   ++ RK V+LG+ P  L      +   +VFA ++  
Sbjct: 650  SGPTLLVALEDGNVISFNVSLKGFSISGRKTVTLGSGPARLHVLPRPDGICNVFATTEHA 709

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
            ++IYSS  +++YS     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++S+P
Sbjct: 710  SLIYSSEGRIVYSATTADDATFVAPFDSEAFPDSIVLSTDEHIRICHVDSERLTHVKSLP 769

Query: 711  LGEHPRRICHQEQSRTFAICSLKNQSCA-EESEMHFVRLLDD-------QTFEFISTYPL 762
            + E  RR+ +    + F +  +K +    EE     VRL+D+       Q FE  ++  L
Sbjct: 770  MHETVRRVAYSPGLKAFGLGCIKKELVENEEVVTSTVRLVDEIIFQELGQPFELNASASL 829

Query: 763  DTFEYGCSILSCSFSDDSNV--YYCVGTAYVL---PEENEPTKGRILVFIVEDGK-LQLI 816
            +  E  C I +     + N+   + VGT++V     +E   T+GRI+V  V++ + L  I
Sbjct: 830  ELVE--CVIRAELPDSNGNMTERFLVGTSFVADPGTDEAGETRGRIVVLGVDESRQLYQI 887

Query: 817  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 876
            A    KG    L   +  ++A +++ + +Y +         L     +      + +   
Sbjct: 888  ASHNLKGVCRCLAMLDDYIVAGLSKTVVVYSYAQETSTAASLTKVASYRPASFPVDLDVS 947

Query: 877  GDFIVVGDLMKSISLLIYKHEE----GAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            G+ I VGDLM+S++L+ +   +      +EE+AR Y   W ++V  LD+  +L A+   N
Sbjct: 948  GNMIGVGDLMQSLTLIEFTPPQDGKMAKLEEKARHYQQAWTTSVCALDETRWLEADAQGN 1007

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
            +  +R+  E  T+++R +LE+  E ++GE +NR R   +    P  +   +P    G++ 
Sbjct: 1008 VIVLRQRQEAPTEQDRSQLEITSELNIGEQINRIRKLQVA---PGENAVVVPKAFLGSIE 1064

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDL 1051
            G + +   +  +    L   Q+ L+  I+  G L+ + WR+F N+ +  ++   F+DG++
Sbjct: 1065 GTLYLYGDIAPKYQDLLMTFQSRLQGYIQTPGNLSFDLWRAFRNQAREGESPYRFVDGEM 1124

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            IE FLDL  ++ + + + +  +VE++   +EEL R+H
Sbjct: 1125 IERFLDLDESQQELVCEGLGPNVEDMRNLIEELRRMH 1161


>gi|358400469|gb|EHK49795.1| hypothetical protein TRIATDRAFT_146031 [Trichoderma atroviride IMI
            206040]
          Length = 1161

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 324/1175 (27%), Positives = 579/1175 (49%), Gaps = 108/1175 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   HKPT++ H+    F SP   +L++AK  R+EI  +T +G+  +    I+G I  L
Sbjct: 3    YVAPVHKPTSIRHALRIRFLSPDIEDLVVAKANRLEIWRVTEEGMTCLHTKVIHGTIDML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGII 123
            +  +P   A D LFI T+R ++  + W+ E+++L  + +A+ D ++   R + +    ++
Sbjct: 63   QRLQPKDSATDLLFIGTDRLQYFNVAWNPETNQLDAVEQAIEDTAEPYMRQSQSQNRCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFD-NKG---QLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  + + +HL++G+  V      KG   +L+    +RL EL +    FL+     P I 
Sbjct: 123  DPTGKFMAMHLWEGVLNVFRLRIRKGSTTRLEGLDQVRLTELWMKTSTFLHSRTGHPRIA 182

Query: 179  VLYQ---DNKDARHVKTYEVALKDKDFVEG---PWSQNNLDN-----GADLLIPVP---- 223
             LY+   D ++AR +  Y +   DK  V     P     LD       A +LIPVP    
Sbjct: 183  FLYKNQLDREEAR-IAVYRLTEDDKGGVSSKFDPQKDRELDQVIPDPYASMLIPVPVYEE 241

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFKAIPIR---PSITKAYGRVDADGSRY 268
                          L G+L++GE  + Y  +  +  +      P I  A+   + DG+RY
Sbjct: 242  KRYHVRNNEGARAHLGGLLVVGETLLTYFDSLTYSNVCSTLDDPKIYVAWA--ECDGTRY 299

Query: 269  LLGDHAGLLHLLVITHEKEK----VTGLKIELLG------ETSIASTISYLDNAVVYIGS 318
             L D  G L LL I    E     VTG+ +  +        TS AS++ Y+ N +++IGS
Sbjct: 300  FLADDYGRLDLLEIKTTNESTGVVVTGMTVHPMAFGDSSRYTSRASSLVYMGNNLLFIGS 359

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
             +GDSQL+ +    D +   + +++   N  PI+DF ++DL  +            GQ +
Sbjct: 360  HHGDSQLLHV----DIESQQMTLIKVISNNAPIMDFTIMDLGNREGDAQSGNTFSSGQAR 415

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
            +V  SGAY+DGSLR +R+G+G+ ++  + E++G +G+++LRS      DT +V+S ++ T
Sbjct: 416  IVAGSGAYQDGSLRSIRSGVGLEDRGLLDEIEGTRGLFTLRSVDSAKADT-VVISTLAGT 474

Query: 426  RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 485
            R+L    ++  E    +G   ++ TL   +    Q++Q+T  +V L+   S    + W++
Sbjct: 475  RVLRFEPDNIEELFSFQGMDLESPTLLAANLPSGQILQITPQAVNLLDPDSGVSVSSWQA 534

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINP 539
            P G ++  A+AN    LL+  G  LV L + D +    K A  +       +ISC+    
Sbjct: 535  PEGKTITAASANTKWALLSVDGSILVSLNLLDNLKATTKDASQDSVSGRPDQISCIH--- 591

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAF----E 591
               +P       +G WT  ++ +  +  L  +  E L        +PR V L        
Sbjct: 592  AARDP--QDFGVIGWWTSGTISVVDMATLTPLHGEPLRQTDDSASVPRDVALVQLHPPES 649

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRP 650
                +L AL DG++++F +++K   ++ RK V+LG+ P  L     ++   +VFA ++  
Sbjct: 650  SGPTMLVALEDGNVISFNVSVKGFAISGRKTVTLGSGPARLHVLPREDGICNVFATTEHA 709

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
            ++IYSS  +++YS     + + + PF+S AFPDS+ ++ E  + I  +D+ +  H++++P
Sbjct: 710  SLIYSSQGRIVYSATTAADATFVAPFDSEAFPDSIVLSTEDHIRICHVDNERLTHVKALP 769

Query: 711  LGEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC 769
            + E  RR+ +    R F + C  K     EE     V+L+D+  F+ + T  L       
Sbjct: 770  MYETVRRVAYSPGLRAFGLGCIKKELVNNEEVITSTVKLVDEIIFQELGTPFLLNASSSL 829

Query: 770  SILSCSFS---DDSN----VYYCVGTAYVLPE---ENEPTKGRILVFIVEDGK-LQLIAE 818
             ++ C       D+N      + VGT++V  +   E+  TKGRILV  V++ + L  I  
Sbjct: 830  ELVECVIRAELPDANGNLAERFLVGTSFVADQGTAESGETKGRILVLGVDESRQLYQITS 889

Query: 819  KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 878
               KG    L   N  ++A + + +  Y +      +  L            + +   G+
Sbjct: 890  HSLKGVCRCLVMMNNYIVAGLTKTVVAYSYNQDTSTSASLTKLASFRPASFPVDLDVSGN 949

Query: 879  FIVVGDLMKSISLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
             I +GDLM+S++L+ +      ++  +EE+AR Y   W +++  LDD  +L A+   N+ 
Sbjct: 950  IIGIGDLMQSLTLVEFTPPQDGKKAKLEEKARHYQQAWTTSISALDDSRWLEADAQGNVI 1009

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
             +R+N E  T++++ +L+V+ E ++GE +NR R   +    P  +   +P    G+  G 
Sbjct: 1010 VLRQNLEAPTEQDQSQLQVISELNIGEQINRIRKLQVA---PGENAIVVPKAFLGSTEGT 1066

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIE 1053
            + +   +  +    L   Q+ L++ I   G L+ + WR+F N+ +  +A   F+DG++IE
Sbjct: 1067 LYLYGDIAPKYQDLLMTFQSRLQEYISTPGNLSFDLWRAFRNQSREGEAPFRFVDGEMIE 1126

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
             FLDL   + + + + +  SVE++   +EEL R+H
Sbjct: 1127 RFLDLDEGKQELVCEGLGPSVEDMRNLIEELRRMH 1161


>gi|347838030|emb|CCD52602.1| similar to DDB1B (Damaged DNA Binding protein 1 B); damaged DNA
            binding / protein binding [Botryotinia fuckeliana]
          Length = 1157

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 349/1177 (29%), Positives = 592/1177 (50%), Gaps = 116/1177 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++V  +   N    +E  L++AK  R+EI   T  GL       IYGRI+ L
Sbjct: 3    YLAPIHRPSSVRLTLRLNLLDHREECLVLAKANRLEIWRATEDGLTMAYSKSIYGRISML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  +P G   D LF+ T R ++  + W+ ++ +L T ++  DVS    R +++    ++D
Sbjct: 63   QKIQPAGSKTDHLFVGTVRAQYFTVMWNPQTHKLDTMQSFVDVSQEHMRDSESRDRCLVD 122

Query: 125  PDCRLIGLHLYDGLFKVI----PFDNKGQ-LKEAFNIRLEELQVLDIKFLYGCAK-PTIV 178
            P  RL+ + LY+G+  ++    P   K   L+    +R+ E++V    FLY   K P + 
Sbjct: 123  PTGRLLVMELYEGVLNLVKIVKPRGGKTDYLENPEQVRISEMKVRASAFLYTDTKQPKLA 182

Query: 179  VLYQDNKDARHVKTYEVALKDK-----DFVEGPWSQNNLDN---GADLLIPVPPP----- 225
            +LYQD ++   + TY + L DK      F      +N++D+   GA  +IPVP       
Sbjct: 183  LLYQDARENVKLATYRM-LDDKGQLILQFDPKKNRENDVDDLCVGAMHIIPVPKARDEAS 241

Query: 226  --------------LCGVLIIGEETIVYCSANAFKAIPIRPSITKAY---GRVDADGSRY 268
                          L G++++GE    Y    + KAI +  ++ +A         D   Y
Sbjct: 242  KRYIVRNATTAKANLGGLVVLGETKFTYLDDES-KAI-VEYALDEAVLWAAWEPIDERTY 299

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            LLGD  G L++L I  +   VTGL++  LG+ S  +++  L N V YI S   D+Q++++
Sbjct: 300  LLGDDYGFLYILTILVDGATVTGLQVVKLGQVSKPTSLENLGNGVFYIASHEADNQVVQI 359

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDG 377
            +L+    G  V +L+   N+ PI+DF V+D+     E Q      GQ ++VT SG ++ G
Sbjct: 360  DLESPEHG--VTLLQTLPNIAPILDFTVMDMGGREGETQLNEYSSGQARLVTGSGGFEGG 417

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            SLR VR+G+G+++ A + E++GI+ +++L S    P DT LVVSF +ETR    + + ++
Sbjct: 418  SLRSVRSGVGLDDTAILAEMEGIRKVFALHSGPTLPNDT-LVVSFSTETRFFKFDTQGDI 476

Query: 437  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE E ++   S ++TL  ++     ++QVT   V +   +     + W+ P G  +  A+
Sbjct: 477  EEVETVKNLSSTSETLLTYNLDEGCILQVTQHEVSIYGKSPG---HRWQPPNGQIITAAS 533

Query: 496  ANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGM 554
             N + +LL++ G  L  L I    L EV   +L + +++C+ +  +        I  VG+
Sbjct: 534  GNQNYILLSSNGRTLFTLSIQQN-LAEVAFQELGDDQVACIHVPQV-----MGDIGVVGL 587

Query: 555  WTDISVRIFSLPDLNLITKEHL---GGEIIPRSVLLCA-----FEGISYLLCALGDGHLL 606
            W   SV +  L  LN I  E L    G  IPR + L         G + L  ++ DG +L
Sbjct: 588  WKSGSVSLLDLATLNTIVSEDLRRADGASIPRDIALTQILPPELSGPT-LFVSMEDGIVL 646

Query: 607  NFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNV 665
            +F ++     L+ RK + LGTQ   L+     NTT +VFA  + P++IY S  + +YS V
Sbjct: 647  SFNVDKSDCSLSGRKSIVLGTQQAQLQILPRDNTTFNVFATCEHPSLIYGSEGRTVYSAV 706

Query: 666  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 725
              ++   +C  NS A+P S+ +A   EL +  ID+ ++ H+R++P+GE  RR+ +  + +
Sbjct: 707  TAEDAIAVCSLNSVAYPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAYSAKEK 766

Query: 726  TFAICSLKNQ-SCAEESEMHFVRLLDDQTF-EFISTYPL----DTFEYGCSILSCSFSDD 779
            +FAI ++K + +  +E      RL+D+  F E    Y L    +  E        +   D
Sbjct: 767  SFAIGAIKRELTKGQEVVTTSFRLVDEVVFGELGEPYYLPPNNEIIETVVRAELPTRHGD 826

Query: 780  SNVY--YCVGTAYVLPEENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLL 836
              +   + VGT++ L EE    +GR+L+F V  D    +IA    KG+   +   +GK++
Sbjct: 827  GELVERFLVGTSF-LHEEEANVRGRLLIFGVNADRAPYMIASHNLKGSCRCIGVLDGKIV 885

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
            AA+N+ + +Y +      +  L+    +      + +    + I V D+MKSI+L+ Y  
Sbjct: 886  AALNKTVVMYDYEETSSTSATLKKLATYRCSTCPIDIDITDNIIAVADIMKSIALVEYT- 944

Query: 897  EEGA------IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 950
              GA      +EE AR     + ++V  +D D YL  +++ NL  +++N EG T E++ R
Sbjct: 945  -PGADGLPDKLEEVARHAQQVFSTSVAEVDTDTYLETDHDGNLILLKRNREGVTREDKTR 1003

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLE 1010
            +EV  E +LGE VNR +  ++       D   IP    GT  G I + + +P +    L 
Sbjct: 1004 MEVTCEMNLGEMVNRVKRINVET---SKDALLIPRAFLGTTEGSIYLFSLIPPQNQDLLM 1060

Query: 1011 KLQTNLRKV-----IKGV-------------GGLNHEQWRSF-NNEKKTVDAKNFLDGDL 1051
            +LQ+ L  +     I+G              G L+  ++RS+ +  ++T +   F+DG+L
Sbjct: 1061 RLQSRLASLPSASSIRGSSDSTSPHQIELSPGNLDFNKYRSYISATRETSEPFRFVDGEL 1120

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            IE FLDL     + +++ + V  E+L   VE L RLH
Sbjct: 1121 IERFLDLEVEVQEHVAEGLGVKAEDLRGMVEGLRRLH 1157


>gi|342885673|gb|EGU85655.1| hypothetical protein FOXB_03801 [Fusarium oxysporum Fo5176]
          Length = 1160

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 326/1170 (27%), Positives = 580/1170 (49%), Gaps = 99/1170 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   H+ T++ H+   N  SP   +L++AK  R+EI  LT +GL  +    I+G IA L
Sbjct: 3    YVAPIHRATSIRHALRANVLSPDIDDLVVAKANRLEIWRLTEEGLVCLQTKLIHGSIAML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGII 123
            +  RP G   D LFI T+R  +  L W+  + +L  I R + D+++   R + +    ++
Sbjct: 63   QCLRPKGSETDLLFIGTDRLHYFNLVWNPLTKQLETIERVIEDLAEPYMRHSSSQNKCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFD-NKG---QLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  R + +HL++G+  V      KG   +L+    +RL EL +    F++     PTI 
Sbjct: 123  DPTGRFLAMHLWEGVLNVFKLPIRKGSTNKLERLDQVRLTELFMKASTFIHSRTGHPTIA 182

Query: 179  VLYQ---DNKDARHVKTYEVALKDKDFVEG---PWSQNNL-----DNGADLLIPVP---- 223
             LY+   + ++AR V  Y +   DK        P     L     D  A +LIPVP    
Sbjct: 183  FLYKTQLEQEEARLV-IYRLTHDDKGNTVSKFDPHKDRELDVVIPDPYASMLIPVPLDEE 241

Query: 224  ------------PPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRVDADGSRY 268
                          L G+L+IGE  + Y    +  +  ++   P I  ++   + DG+ Y
Sbjct: 242  KRYHVRNTEGAKAHLGGLLVIGETLLTYFDGLTHRSVSSVLQDPRIFVSWA--EYDGTHY 299

Query: 269  LLGDHAGLLHLLVITHEKEK----VTGLKIELL------GETSIASTISYLDNAVVYIGS 318
            LL D  G L LL I    E     VTG+ +E L        TS AS + YL ++ +++ S
Sbjct: 300  LLADDYGRLDLLTIDTNLETTGVVVTGMTLEPLKIGRSPAITSRASNLVYLGDSTLFVAS 359

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
             +GDSQL ++    D + + V +++ + N  PI+DF ++D+  +            GQ +
Sbjct: 360  HHGDSQLYQI----DVESATVTLVQSFSNNAPILDFSIMDMGNREGDAQAGNAFSSGQSR 415

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
            +V   GAY+DGSLR +R+G+G+ ++  + EL+G +G+++LRS   D  DT LVVS I+ET
Sbjct: 416  IVAGCGAYRDGSLRSIRSGVGLEDRGVLDELEGTRGLFTLRSYGSDLVDT-LVVSAITET 474

Query: 426  RILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
            R+L+ + E  +EE    +G    T+TL   +    QL+Q+T  SV L+      + ++W 
Sbjct: 475  RVLSFDREGGIEEIYSFQGMSLDTETLLASNLPNGQLLQITPRSVVLLDPEGGTVTSKWD 534

Query: 485  SPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENP 544
             P G S+  A+AN+   LL+  G  LV L +   +   V+ +Q         I+ I    
Sbjct: 535  VPSGKSITRASANSKWALLSVDGTSLVSLNLLQNLAVNVQQSQNNSGSQADQISCIHAAR 594

Query: 545  SYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEG--IS--YL 596
                +  VG W+   + +  +  L  +  E +        +PR + L       IS   L
Sbjct: 595  DPPDLGVVGWWSSGQISLIDMASLKPLHGESMRQTEDSATVPRDIALVQLHPPEISGPTL 654

Query: 597  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYS 655
            L A+ DG+++ F ++ K   ++ RK V+LG+ P  L     ++ T++VF  ++  ++IYS
Sbjct: 655  LVAMEDGNVVTFNVSTKDFAVSGRKSVTLGSNPARLHILPQQDGTSNVFVTTEHASLIYS 714

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 715
            +  ++++S     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++P+ E  
Sbjct: 715  AEGRVIFSATTADDATFVAPFDSHAFPDSVILSTDQHIRICHVDKERLTHVKALPVNETV 774

Query: 716  RRICHQEQSRTFAICSLKNQSCA-EESEMHFVRLLDDQTF-EFISTYPLD---TFEYGCS 770
            RR+ +    + F + S+K +    EE      RL+D+  F E  S +PLD   + E    
Sbjct: 775  RRVAYSPGLKAFGLGSIKKELVGNEEVVSSSFRLVDEIVFKELGSPFPLDASSSLEIVEC 834

Query: 771  ILSCSFSDDSNVY---YCVGTAYVLPEENEP--TKGRILVFIVEDGK-LQLIAEKETKGA 824
            ++     D    +   + VGT+++     +P  T GRILV  V+  + +  I     KG 
Sbjct: 835  VIRAELPDVGGNHVERFIVGTSFISDGVEDPNGTGGRILVLGVDSNRQVYQIVSHNLKGP 894

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 884
               L   +  ++A +++ +  Y ++     +  LQ    +    L + +   G+ I V D
Sbjct: 895  CRCLGMIDDNIIAGLSKTVVAYSFLQETSSSGSLQKLAVYRPAALPVDLDISGNMIGVVD 954

Query: 885  LMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
            LM+S+SL+ +       +  +EERAR +   W ++V  ++ + +L A++  NL  +++N 
Sbjct: 955  LMQSLSLVEFIPAQDGNKAKLEERARHFEPLWATSVCHIEGERWLEADSKGNLVVLQRNV 1014

Query: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIA 999
            +  T+++R RLE+  E ++GE +NR R     + +P ++ G + P     +  G + +  
Sbjct: 1015 DAPTEQDRSRLEITSEMNIGEQINRIRK----LHVPMAENGIVHPRAFLASAEGSLYLYG 1070

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDL 1058
             +  +    L   Q+ + + I   G +  + WRSF NE +  +    F+DG+++E FLD+
Sbjct: 1071 DIAPQYQDLLMTFQSKMEEYIHVPGSVEFKLWRSFRNENRESEGPFRFIDGEMVERFLDM 1130

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
               + + + + +  S+E++   +EEL R+H
Sbjct: 1131 DEGKQELVCEGLGPSIEDMRNLIEELRRMH 1160


>gi|238491136|ref|XP_002376805.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
            NRRL3357]
 gi|220697218|gb|EED53559.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
            NRRL3357]
          Length = 1117

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 342/1132 (30%), Positives = 562/1132 (49%), Gaps = 104/1132 (9%)

Query: 36   KCTRIEIHLLTPQGLQPMLDVPIYGRIATL-ELFRPHGEAQDFLFIATERYKFCVLQWDA 94
            K  R+EI+ LTP GL       +Y +++ L  L  P     D LF+ T+RY +C L WD+
Sbjct: 11   KANRLEIYTLTPDGLNLAASCTLYAKVSMLARLPAPAHSPTDHLFVGTDRYTYCTLSWDS 70

Query: 95   ESSELIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF--------- 144
              + + T R   D++D   R +  G   +IDP  R + L +Y+GL  V+P          
Sbjct: 71   AQNRIRTERNYVDIADPSSRESQTGNRCLIDPSGRFMTLEVYEGLVAVVPIVQLPARKRG 130

Query: 145  -----------DNKGQLKEAFNIRLEELQVLDIKFLY-GCAKPTIVVLYQDNKDARHVKT 192
                          G+L E    R++EL V    FL+     P + +LY+DN+     K 
Sbjct: 131  RAPAVPTGPDAPKVGELGELTTARIDELFVRSSAFLHVQSGLPRLALLYEDNQ-----KK 185

Query: 193  YEVALKDKDFVEGPWSQN-------------NLDNGADLLIPVPPPLCGVLIIGEETIVY 239
              + +++ ++     S +              LD GA  LIPVP PL G+LI+GE +I Y
Sbjct: 186  VRLMVRELNYTSATASTSADATLTHIADFAQELDLGASHLIPVPAPLGGLLILGETSIKY 245

Query: 240  CSANAFKAIPIRP----SITKAYGRVDADGSRYLLGDHAG-LLHLLVITHEKEKVTGLKI 294
               +  + I  RP    +I  A+  VD+   R+LL D  G L  L+++     +V G K+
Sbjct: 246  VDDDNNEIIS-RPLDEATIFVAWEGVDS--QRWLLADDYGRLFFLMLVLDSDNQVQGWKL 302

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
            + LG TS AS + YL   +V++GS  GDSQ++++       GS+ E+++   N+ PI+DF
Sbjct: 303  DHLGNTSRASALVYLGGGIVFVGSHQGDSQVLRI-----GNGSF-EIIQALSNIAPILDF 356

Query: 355  CVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGM 402
             ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G+ E   + +++ I  +
Sbjct: 357  TIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMEHITDL 416

Query: 403  WSLR-SSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFCSQTQTLFCHDAIYNQ 460
            W L+  +  D  DT L+V+FI ETR+   + + E+EE +   G      TL   +    +
Sbjct: 417  WGLQVQAGGDTLDT-LLVTFIDETRVFHFSPDGEVEELDHFLGLSLSENTLLAANLPRGR 475

Query: 461  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD--G 518
            ++QVT   V +       +  EW  P    +  A+AN   ++L  GG  +  L+IG    
Sbjct: 476  ILQVTEQRVLIADLEGGMVVYEWTPPNELVITAASANDDSLVLVIGGELMTVLDIGTEAQ 535

Query: 519  ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG- 577
            ++TE K    + ++S + +       S +++  VG      V +  L DL  +    LG 
Sbjct: 536  VITEKKFGA-DSQVSGVTVPA-----SPTEVCVVGFPQLAKVSVLRLRDLTEVHTTSLGP 589

Query: 578  -GEIIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             GE  PRSVL+      S   L  ++ DG ++ +        L+   K+ LG++  T + 
Sbjct: 590  AGEAFPRSVLVADVLADSPPTLFISMADGSVITYSFKTDDYSLSHMNKLILGSEQPTFKK 649

Query: 635  FSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
                +  + VFA  + P++IY S  +++YS VN +  S +C FNS A+P S+A+A   EL
Sbjct: 650  LPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATLHEL 709

Query: 694  TIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLL--DD 751
             I  +D  +   I+++ +G   RR+ +    + F I +++ +  A+ +E+   R +  D+
Sbjct: 710  KIALVDRERTTQIQTLQIGATVRRVAYSPSEKAFGIGTIERK-LADGAEIVTSRFMLADE 768

Query: 752  QTFEFISTYPLDTFEYGCSILSCSF--SDDSNV------YYCVGTAYVLPEENEPTKGRI 803
              F  + ++ L   E   S++   F    D N        + VGTAY+  E  E  +GRI
Sbjct: 769  VLFRQLDSFELRPEEIVESVIRAEFPAGKDENGREMTKDRFVVGTAYLDDEGEESIRGRI 828

Query: 804  LVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 862
            L+F +++G KL  +AE   KGA  +L     K++AA+ + I +YK +  + GT +L+   
Sbjct: 829  LMFEIDNGRKLTKVAELPVKGACRALAMLGDKIVAALVKTIVIYKVVNNNFGTMKLEKLA 888

Query: 863  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEERARDYNANWMSAVEI 918
                    + V   G+ IVV DLMKS+ LL +K  E     ++ E AR +   W + V  
Sbjct: 889  SFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGENGLPDSLTEVARHFQTVWATGVAC 948

Query: 919  LDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            +D D +L ++   NL  +R+N  G  +++R RLEV  E  LGE VNR R  ++      +
Sbjct: 949  IDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISLGEMVNRIRPVNIQQL---A 1005

Query: 979  DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE- 1037
             V   P    GTV G I + A +  E   FL +LQ  +   ++ +G +   ++R F +  
Sbjct: 1006 SVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGKVESLGEMPFNEFRGFRSMV 1065

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEELCKRVEELTRLH 1088
            ++  +   F+DG+LIE FL+      +EI  ++  ++V E+   +E L RLH
Sbjct: 1066 REATEPYRFVDGELIEQFLNCEPELQEEIVNSVGMMNVHEVKVMIEALRRLH 1117


>gi|325094412|gb|EGC47722.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H88]
          Length = 1201

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 348/1222 (28%), Positives = 577/1222 (47%), Gaps = 162/1222 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F  P++  L++AK  R+E +  TP GL       IYG++  L
Sbjct: 3    YVVPIHHASSIRHAIKLQFLEPEKDCLVVAKSNRLEFYSQTPDGLSLEYSKAIYGKVTML 62

Query: 66   EL---------------------------FRPHGEAQDFLFIATERYKFCVLQWDAESSE 98
                                         FRP     D LFI T+R  +  + WD ++  
Sbjct: 63   AKLSRPPLPSKPPPQPQSLDHQLPLQPAPFRPQ---TDILFIGTDRASYFTVSWDQKTKN 119

Query: 99   LIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIP----FDNKG----- 148
            L T R   D++D   R +  G   +IDP  R + L LY+G+  VIP      ++G     
Sbjct: 120  LRTERKYVDLADPSARASQLGDRCLIDPSGRFLTLELYEGIVTVIPIGQPLRSRGSGRRL 179

Query: 149  ---------------------------QLKEAFNIRLEELQVLDIKFLYGCAK--PTIVV 179
                                       +L E    R+EEL V    FL+  A   P + +
Sbjct: 180  GKRAANASASAAYANQDAAAGAAAADLELGEPCQARVEELLVRSSTFLHTQADTLPRMAL 239

Query: 180  LYQDNKDARHVKTYEV---------------------------ALKDKDFVEGPWSQNNL 212
            LY+D      +K  E+                            LK  D +     +  L
Sbjct: 240  LYEDTMGKVRLKVRELEVMHGGMGMGGGTGSGGGIGADGGIVAVLKGLDLL-----KEEL 294

Query: 213  DNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIR-PSITKAYGRVDADGSRYL 269
            + GA  L+PVP PL G+L++GE +I Y   ++N   + P++  +I  A+ +VD  G R+L
Sbjct: 295  EMGASFLVPVPAPLGGLLVLGETSIRYLDDASNECISQPLKEATIFVAWEQVD--GQRWL 352

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L+++      V   K++LLG+   AS + Y+   + +IGS  GDS+LI++
Sbjct: 353  LADDYGRLFFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQGDSELIRI 412

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKD 376
                  +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ D
Sbjct: 413  T-----EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFND 466

Query: 377  GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            GSLR VR+G+G+ E   +  ++ I  +W+LR +    F   L+VSF+ ETR+     + E
Sbjct: 467  GSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGE 526

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE E   G      TL   +  + +++QVT  +VR+       +  EW      ++  A
Sbjct: 527  VEEKEEFMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQQKAITAA 586

Query: 495  TANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 553
            ++N   V+L  GG  L+  +I GD  +T  K   ++ ++S + +     +P+ + I  + 
Sbjct: 587  SSNDDHVVLMVGGQVLMIFDISGDINITGEKDFGVDTQVSGVTVT---TSPARACILCLP 643

Query: 554  MWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFL 609
               ++ V   SLPDL +     LG  G+ +PRSVL+        + L  ++ DG + +F 
Sbjct: 644  QTAEVVV--MSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFS 701

Query: 610  LNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 668
             N +   LT   K++LG+ QP   +        +VFA  ++P++IY+   +++YS VN  
Sbjct: 702  FNSEDFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSD 761

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFA 728
            + S +C FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F 
Sbjct: 762  QASRICHFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRRVAYSAPERAFG 821

Query: 729  ICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSN 781
            I ++K   +  AE     F+ L D+  F  +  Y L+  E   S++   F     S+ ++
Sbjct: 822  IGTIKRTLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVESVIRAQFPDGIGSEGND 880

Query: 782  VY---YCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 837
            ++   + VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++A
Sbjct: 881  LFKDLFVVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVA 940

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            A+ + + +Y           L     +      + +   G+ I V DLMKS+S++ Y+  
Sbjct: 941  ALMKTVVVYTLSKGQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQG 1000

Query: 898  EG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
                  ++ E AR +   W +AV  + +D +L ++   NL  + +N  G TD++R RLEV
Sbjct: 1001 ANGLPDSLTEVARHFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEV 1060

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
              E  LGE VNR R  + +     ++    P    GTV G I +   +       L +LQ
Sbjct: 1061 TSEILLGEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQ 1119

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------ 1066
            + +  ++   GG+   ++R+F N  ++T +   F+DG+LIE FL+      +EI      
Sbjct: 1120 SAMAGMVVTPGGMPFNKFRAFRNTIRQTEEPYRFVDGELIERFLNCGVELQEEIVGKVIA 1179

Query: 1067 SKTMNVSVEELCKRVEELTRLH 1088
                 V+VE +   VEEL R+H
Sbjct: 1180 DGVAGVTVESVKGLVEELRRMH 1201


>gi|302503607|ref|XP_003013763.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
 gi|291177329|gb|EFE33123.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
          Length = 1148

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 341/1169 (29%), Positives = 571/1169 (48%), Gaps = 109/1169 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F SP E  L++AK  R+E++  +  GL       IYGRI  L
Sbjct: 3    YVVPIHGASSIRHALRAKFISPDEDCLVVAKANRLELYTQSADGLVLQHSKAIYGRITLL 62

Query: 66   ELFRPHGEA-----QDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQ 119
            +   P   A      D LF+ T++Y +  + WD+   +L T R   D++D   R   +  
Sbjct: 63   KKL-PRSTAGGLALTDALFVGTDQYAYFSITWDSVHEQLRTERKYIDLADGSLREAHSDD 121

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPFDNKG---------------------QLKEAFNIRL 158
               IDP    + L +Y+G+  + P                          QL E   +R+
Sbjct: 122  RCQIDPSGSFLTLEVYEGVVSIFPLVTADSHKRAKSAVSASASSASTPVEQLGEPLQVRI 181

Query: 159  EELQVLDIKFLYGCAK--PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWS-------- 208
            EEL V    FL   A   P   +LY+D +    +K  ++          P S        
Sbjct: 182  EELMVRSSAFLDQEASNTPRFALLYEDTQGKVKLKLRDLKYTHAIITSDPGSAAELKDVT 241

Query: 209  --QNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVD 262
               + +D GA +LIPVP PL G+LIIGE +I Y   +  + I  RP    ++  A+ +VD
Sbjct: 242  TLSDEVDLGASILIPVPRPLGGLLIIGESSIKYVDVSRNETIS-RPLAESTVFVAWEQVD 300

Query: 263  ADGSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
              G R+LL D  G L  L+++      V   K++ LG TS AS + YLD  +V++GS  G
Sbjct: 301  --GQRWLLADDYGRLFFLMLVLDADNAVDTWKVDFLGVTSRASVLVYLDGGIVFVGSHQG 358

Query: 322  DSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSG 372
            DSQ+I++      +G + ++++   N+ PI+DF V+D+  +         GQ ++VT SG
Sbjct: 359  DSQVIQIK-----EGGF-DLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGSG 412

Query: 373  AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            A+ DGSLR VR+G+GI E   +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   +
Sbjct: 413  AFGDGSLRSVRSGVGIEELGVLASMEHITDLWTLRSACPEPFFDTLLVSFVNETRVFHFS 472

Query: 432  LEDELEETE--IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PG 488
             + ++EE E    G      TL   +   N+++QVT  + R +   S  +   W+S    
Sbjct: 473  ADGDVEEKEDGFLGLVFSQSTLLATNIPGNRILQVTESTSRAIDVDSGMII--WRSSYEE 530

Query: 489  YSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQ 548
            +++  A+AN   ++L  GG  LV + +    L   +  + + ++S + I       S +Q
Sbjct: 531  FTITSASANDDYLVLVLGGVRLVCISLSTFELVGSRDFEADNQVSGMTIPA-----SPTQ 585

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGH 604
               V +     + I +LP+L +  K+ LG  GE IPRSV++          L  ++ DG 
Sbjct: 586  ACIVCLPQSAEIIILNLPELEVKNKQALGEPGEAIPRSVIVAEILPNKPPTLFVSMADGT 645

Query: 605  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYS 663
            + +F  ++    + +  K++LG++  + +     N  + VFA  D P++I++S  +++YS
Sbjct: 646  VFSFSFDVHAFAIFNSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYS 705

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
             V+    S +C  N+ A+P S+A++ + EL I  +D+ +   I ++P+    RR+ +   
Sbjct: 706  AVDSASASRICSLNTQAYPGSIALSSQNELKIAIVDEERTTQIHTLPMHASVRRLAYSPM 765

Query: 724  SRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPL-----------DTFEYGCS 770
             + F + ++K +  +  EE    FV L D+  F  +STY L               YG  
Sbjct: 766  EKAFGLGTVKRKISNGVEEVSSSFV-LADEILFRPLSTYDLRPDELVECVIRSQLNYGKD 824

Query: 771  ILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLN 829
             +  S S D    + VGTA++    ++  +GRIL+F V   + L LI EK   GA  +L 
Sbjct: 825  EVGNSISKD---LFFVGTAFLDDVGDDHIRGRILIFEVNRSRELSLIVEKSLMGACRTLA 881

Query: 830  AFNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
              +  LL A + + + ++K      G   L+    +      + +   GD + V D+MKS
Sbjct: 882  VMDHTLLVAGLVKSVSVFKLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKS 941

Query: 889  ISLLIY-KHEEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 943
            +SL+ Y + EEG      EE AR Y   W +AV  +++++YL A+   NL  +++N  G 
Sbjct: 942  MSLVQYTQAEEGEQEPKFEEVARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGV 1001

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH 1003
            T+ +R RL+   E  LGE VNR  H  +V    ++ V     ++   V+G I +   +  
Sbjct: 1002 TESDRKRLQPTSEIRLGEMVNRI-HPIVVQTHTETAVSA-RALLATQVDGSIYLFGLINP 1059

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTR 1062
                 L +LQT +  +    G +   ++R+F    +  D    F+DG+LIE FL  +   
Sbjct: 1060 AYIDLLLRLQTAMGSITISPGEIPFPKYRAFRTTVRQSDEPFRFVDGELIERFLSCTPAM 1119

Query: 1063 MDEISKTMN---VSVEELCKRVEELTRLH 1088
             +EI   ++   V+V  L + +EEL R+H
Sbjct: 1120 QEEIVGRLDDSTVTVSSLKEMIEELRRMH 1148


>gi|302894051|ref|XP_003045906.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726833|gb|EEU40193.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1162

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 330/1177 (28%), Positives = 578/1177 (49%), Gaps = 111/1177 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   H+ T++ H+   N   P+  +L++AK  R+EI  L+ +G++ +    I+G I+ L
Sbjct: 3    YVAPIHRATSIRHAIRANVLDPEIDDLVVAKANRLEIWRLSEEGMECLQTKLIHGTISML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGII 123
            +  RP G   D LFI T+R ++  L W+ E  +L  I R + D+S+   R + +    ++
Sbjct: 63   QRLRPKGSETDLLFIGTDRLQYFNLAWNPEMKQLDTIERVIEDLSEPYMRHSQSQNKCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNK----GQLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  R + +HL++G+  V     +     +L+    +RL EL +    F++     PTI 
Sbjct: 123  DPTARFLAMHLWEGVLNVFRLPTRKGSTNKLEILDQVRLTELFMKASTFIHSRTGHPTIA 182

Query: 179  VLYQ---DNKDARHVKTYEVALKDKDFVEG---PWSQNNL-----DNGADLLIPVP---- 223
             LY+   + ++AR +  Y +   DK  V     P     L     D  A +LIPVP    
Sbjct: 183  FLYKSQMEQEEAR-LAIYRLTHDDKGGVVSKFDPHKDRELDVVIPDPYASMLIPVPLDEE 241

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFKAIPIR---PSITKAYGRVDADGSRY 268
                          L G+LI+GE  + Y      +++      P I  A+   + DG+ Y
Sbjct: 242  KRYHVRNTEGAKAHLGGLLIVGETLLTYYDGLTHRSVSSSLKDPRIFVAWA--EYDGTHY 299

Query: 269  LLGDHAGLLHLLVITHEKEK----VTGLKI--ELLGE----TSIASTISYLDNAVVYIGS 318
             L D  G L +L I    E     VTG+ +    LGE    TS AS++ Y+ N  +++ S
Sbjct: 300  FLADDYGRLDMLTIETNVEATGVVVTGMTLVPMKLGESPALTSRASSLVYMGNNTLFVAS 359

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
             +GDSQL +++ + +A    + +++   N  PI+DF ++D+  +            GQ +
Sbjct: 360  HHGDSQLYQIDPETNA----MLLIKSLSNNAPILDFSIMDMGNREGDAQAGNAFSSGQSR 415

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
            +V   GAY+DGSLR +R+G+G+ E+  + EL G +G+++LRS   D  DT LVVS I+ET
Sbjct: 416  IVAGCGAYQDGSLRSIRSGVGLEERGILDELDGTRGLFTLRSYNSDLVDT-LVVSSITET 474

Query: 426  RILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
            RIL+ + +  +EE    +G    T+TL   +    QL+Q+T  SV L+   S    + W 
Sbjct: 475  RILSFDTDGGIEEIYSFQGMEQDTETLLASNLPNGQLLQITPKSVVLLDPESGVAVSRWD 534

Query: 485  SPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDIN 538
             P G S+  A+AN    LL+  G  LV L +   +   V+  Q E       +ISC  I+
Sbjct: 535  VPTGKSITRASANTKWALLSVDGTSLVSLNLLQNLAVNVQQTQAEPGSQQPDQISC--IH 592

Query: 539  PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEG-- 592
               + P    I  VG W+   + +  +     +  E +        +PR + L       
Sbjct: 593  AARDPP---DIGVVGWWSSGRISLIDMATFQPLHGESMRQTDDSATVPRDIALVQLHPPE 649

Query: 593  IS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDR 649
            IS   LL A+ DG ++ F +++K   ++ RK V+LG+ P  L      + T+ VF  ++ 
Sbjct: 650  ISGPTLLVAMEDGTVVTFNVSIKGFAVSGRKSVTLGSNPARLHVLPQDDGTSSVFVTTEH 709

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI 709
             ++IYSS  ++++S     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++
Sbjct: 710  ASLIYSSEGRIIFSATTADDATFVAPFDSHAFPDSIVLSTDSHIRICHVDKERLTHVKAL 769

Query: 710  PLGEHPRRICHQEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYG 768
            P+ E  RR+ +    + F + S+K +    EE      RL+D+  F+ +    L      
Sbjct: 770  PVHETVRRVAYSPGLKAFGLGSIKKELVLNEEVVTSSFRLVDEIVFKELGEPFLLNASST 829

Query: 769  CSILSCSFSDD-----SNV--YYCVGTAYV---LPEENEPTKGRILVFIVEDGK-LQLIA 817
              I+ C    +      N+   + VGT+++     +E   T GRILV  V++ + +  I 
Sbjct: 830  LEIVECVIRAELPDAGGNLTERFIVGTSFINDGQVQEANGTLGRILVLGVDEHRQVYQIV 889

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 877
                KG    L   +  ++A +++ + +Y +      +  L+    +    L + +   G
Sbjct: 890  SHNLKGPCRCLGMMDDYIVAGLSKTVVVYNYSQDTSSSGSLEKLAAYRPAALPVDLDISG 949

Query: 878  DFIVVGDLMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            + I VGDLM+S+SL+ +       +  +EERAR Y   W +++  LD++ +L A++  NL
Sbjct: 950  NMIGVGDLMQSLSLVEFIPAQDGRKAKLEERARHYEPIWTTSLCHLDEERWLEADSQGNL 1009

Query: 934  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVN 992
              +++N++  T+++R RLEV  E  +GE +NR R     + +P  D   + P     +  
Sbjct: 1010 IVLQRNADAPTEQDRSRLEVTSEIGIGEQINRIRK----LHVPAGDNSIVHPRAFLASAE 1065

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDL 1051
            G + +   +  +    L   Q+ + + I   G +  + WRSF NE +  D    F+DG++
Sbjct: 1066 GSLYLYGDIAPQYQDLLMTFQSKMEEYIHAPGNIEFKLWRSFRNENRESDGPYRFIDGEM 1125

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +E FLD+   + + + + +  SVE++   +EEL R+H
Sbjct: 1126 VERFLDMDEGKQELVCEGLGPSVEDMRNLIEELRRMH 1162


>gi|239613967|gb|EEQ90954.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ER-3]
 gi|327353314|gb|EGE82171.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 1199

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 349/1217 (28%), Positives = 570/1217 (46%), Gaps = 154/1217 (12%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F  P++  L++AK  R+E +  TP GL       IYG++  L
Sbjct: 3    YVVPIHHASSIRHALKLQFLEPEKDCLVVAKSNRLEFYSRTPDGLSLEHSKAIYGKVTML 62

Query: 66   -ELFRPHGEAQ-------------------------DFLFIATERYKFCVLQWDAESSEL 99
             +L RP    Q                         D LF+ T+R  +  + WD ++  L
Sbjct: 63   AKLSRPPLPTQPQSQPEPQTPDQRPQLQPAPFRPQTDILFVGTDRSTYFTVSWDQKTKNL 122

Query: 100  IT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIP----FDNKG------ 148
             T R   D++D   R +  G   +IDP  R + L LY+G+  VIP      ++G      
Sbjct: 123  HTERKYVDLADGSARESQLGDRCLIDPSGRFLTLELYEGIVTVIPIGQPLRSRGSGRKLG 182

Query: 149  ----------------------QLKEAFNIRLEELQVLDIKFLYGCAK--PTIVVLYQDN 184
                                  +L E    R+EEL V    FL+  A   P + +LY+D 
Sbjct: 183  KRAANASASTMQGNQDVGAADLELGEPCQARVEELLVRSSTFLHTQADMLPRMALLYEDT 242

Query: 185  KDARHVKTYEV---------------------------ALKDKDFVEGPWSQNNLDNGAD 217
                 +K  E+                            LK  D +     +  L+ GA 
Sbjct: 243  MGKVRLKVRELEVTYGGMGIGSGSGGGSGVGADGGSAAVLKGLDML-----KEELEMGAS 297

Query: 218  LLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIR-PSITKAYGRVDADGSRYLLGDHA 274
             L+PVP PL G+L++GE +I Y   ++N   + P+   +I  A+ +VD  G R+LL D  
Sbjct: 298  FLVPVPAPLGGLLVLGETSIRYLDDASNECISQPLEEATIFVAWEQVD--GQRWLLADDY 355

Query: 275  G-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPD 333
            G L  L++I      V   K++ LG    AS + Y+   V +IGS  GDSQLI++     
Sbjct: 356  GRLFFLMLILDSDNAVQSWKLDRLGNIPRASVLVYMGGGVTFIGSHQGDSQLIRIT---- 411

Query: 334  AKGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKDGSLRI 381
             +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ DGSLR 
Sbjct: 412  -EGSF-EVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIVTGSGAFNDGSLRS 469

Query: 382  VRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET- 439
            VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ ETR+     +  +EE  
Sbjct: 470  VRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRVFYFTPDGGVEEKD 529

Query: 440  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 499
            E  G      TL   +    +++QVT  +VR+       +  EW      ++  A++N  
Sbjct: 530  EFMGLGLTESTLIAANLPNGRILQVTERNVRVAELDGGMVMWEWSPVSQKAITAASSNDD 589

Query: 500  QVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDI 558
             ++L  GG  L+  +I G+  +   K   ++ ++S + +     +P+ S I  +    ++
Sbjct: 590  HLVLMVGGQVLMIFDIRGEIKVAGEKDFGVDTQVSGVTVT---ASPARSCILCLPQTAEV 646

Query: 559  SVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKT 614
             V   SL DL +     LG  G+ +PRSVL+        + L  ++ DG + +F  N   
Sbjct: 647  IV--MSLADLTIRHSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFSFNATD 704

Query: 615  GELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 673
              LT   K++LG+ QP   +        +VFA  ++P++IYS+  +++YS VN  + S +
Sbjct: 705  FSLTSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAEGRIVYSAVNSDQASRI 764

Query: 674  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK 733
            C FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F I ++K
Sbjct: 765  CHFNSEAYPASIALATPSELKIALVDAERTTQIQTLEVGETVRRVAYSAPERAFGIGTIK 824

Query: 734  N--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV--------Y 783
               +  AE     F+ L D+  F  +  Y L+  E   S++   F DD +          
Sbjct: 825  RTLEDGAEVIASRFM-LADEIMFRELDVYDLNKDELVESVIRAQFPDDKDSEGEELMKDL 883

Query: 784  YCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
            + VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++AA+ + 
Sbjct: 884  FIVGTSYLDDFGEGSIRGRILAFEVTPNRQLGKVAEMPVKGACRALAIVQDKIVAALMKT 943

Query: 843  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE----E 898
            + +Y           L     +      + +   G+ I V DLMKS+S++ Y+       
Sbjct: 944  VVVYTLSKGQFADYILTKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIVEYQQGTDGLS 1003

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
            G++ E AR +   W +AV  +  D +L ++   NL  +R+N  G T+++R RLEV  E  
Sbjct: 1004 GSLTEVARHFQTLWSTAVAPVAQDTWLESDAEGNLVVLRRNVNGVTEDDRRRLEVTSEVL 1063

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGE VNR R  ++   L  ++    P    GTV G I +   +       L +LQ+ +  
Sbjct: 1064 LGEMVNRIRPVNIQASL-GTEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMAG 1122

Query: 1019 VIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMN 1071
            ++   GG+   ++R+F N  ++  +   F+DG+LIE FL       +EI           
Sbjct: 1123 MVVTPGGMPFNKFRAFRNTVRQAEEPYRFVDGELIERFLGCGAELQEEIVGKVIADGVAG 1182

Query: 1072 VSVEELCKRVEELTRLH 1088
            V+VE +   VEEL R+H
Sbjct: 1183 VTVERVKAIVEELKRMH 1199


>gi|358366432|dbj|GAA83053.1| UV-damaged DNA binding protein [Aspergillus kawachii IFO 4308]
          Length = 1643

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 326/1081 (30%), Positives = 538/1081 (49%), Gaps = 91/1081 (8%)

Query: 70   PHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIIDPDCR 128
            P     D LF+ T+RY +C L WD E +++ T R   D+SD   R    G   +IDP  R
Sbjct: 8    PANSPTDHLFVGTDRYTYCTLSWDGERNQIRTERNYVDISDPSSREAQTGNRCLIDPSGR 67

Query: 129  LIGLHLYDGLFKVIPF--------------------DNKGQLKEAFNIRLEELQVLDIKF 168
             + L +Y+G+  V+P                        G+L E    R++EL V    F
Sbjct: 68   FMTLEVYEGVIAVVPIVQLPSKKRGRQVAPPSGPDAPRVGELGEPTTARIDELFVRSSAF 127

Query: 169  LY-GCAKPTIVVLYQDNKDARHVKT----YEVALK----DKDFVEG--PWSQNNLDNGAD 217
            L+     P + +LY+DN+    +K     Y  A      D  F E    +SQ  LD GA 
Sbjct: 128  LHVQSGPPRLALLYEDNQKKVRLKVRALHYSAATSSTGADAAFEESLDGFSQE-LDLGAS 186

Query: 218  LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDADGSRYLLGDH 273
             LIPVP PL G+L++GE +I Y   ++   I  RP    +I  A+ +VD+   R+LL D 
Sbjct: 187  HLIPVPAPLGGLLVLGETSIKYVDTDS-NEIVSRPLDEATIFVAWEQVDSQ--RWLLADD 243

Query: 274  AG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP 332
             G L  L+++     +V   K++ LG T+ AS + YL   V+++GS  GDSQ++++    
Sbjct: 244  YGRLFFLMLVLDSNNQVQSWKLDHLGNTARASVLIYLGGGVIFVGSHQGDSQVLRI---- 299

Query: 333  DAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRI 381
               GS +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR 
Sbjct: 300  -GNGS-LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRS 357

Query: 382  VRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 440
            VR+G+G+ E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E+EE +
Sbjct: 358  VRSGVGMEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELD 417

Query: 441  -IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 499
               G      TL   +    +++QVT   V +       + NEW  P    +  A+AN  
Sbjct: 418  SFLGLSLSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDRLVITSASANND 477

Query: 500  QVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDI 558
             ++L +GG  L  L+I + + +   K    + +IS + + P+    S + +  VG     
Sbjct: 478  SIVLVSGGQILTVLDINNDVRVVAQKDFGADSQISGVTV-PL----SSAGVCIVGFPQLA 532

Query: 559  SVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKT 614
             V +  L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ +  +   
Sbjct: 533  KVSVLDLGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYAFDASD 592

Query: 615  GELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 673
              LT   ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +
Sbjct: 593  YSLTGMNRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRV 652

Query: 674  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL- 732
            C FNS A+P S+A+A + +L I  +D  +   I+++P+GE  RR+ +    + F I ++ 
Sbjct: 653  CHFNSEAYPGSIAVATKHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFGIGTIE 712

Query: 733  -KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSNVY--- 783
             K +  AE  +  FV L D+  F  +  + L   E   S++   FS     +  +V+   
Sbjct: 713  RKLKDGAEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDR 771

Query: 784  YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
            + VGTAY+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++AA+ + 
Sbjct: 772  FVVGTAYLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKT 831

Query: 843  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG--- 899
            + +Y  +  D G  +L+    +      + V   G+ I + DLMKS+ L+ Y   E    
Sbjct: 832  VVIYGVVNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAIADLMKSVCLVEYSEGENGMP 891

Query: 900  -AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             ++ E AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV GE  
Sbjct: 892  DSLTEVARHFQTVWATGVVCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEIS 951

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            LGE VNR R  ++      + V   P    GTV G I + A +  E   FL +LQ  +  
Sbjct: 952  LGEMVNRIRPVNIQQL---ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAG 1008

Query: 1019 VIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 1077
             ++ +G +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  ++ +  +  
Sbjct: 1009 KVESLGNIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVDSVGMMNKGS 1068

Query: 1078 C 1078
            C
Sbjct: 1069 C 1069


>gi|225558618|gb|EEH06902.1| DNA damage-binding protein 1a [Ajellomyces capsulatus G186AR]
          Length = 1201

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 348/1222 (28%), Positives = 571/1222 (46%), Gaps = 162/1222 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F  P++  L++AK  R+E +  TP G        IYG++  L
Sbjct: 3    YVVPIHHASSIRHAIKLQFLEPEKDCLVVAKSNRLEFYSQTPDGFSLEYSKAIYGKVTML 62

Query: 66   EL---------------------------FRPHGEAQDFLFIATERYKFCVLQWDAESSE 98
                                         FRP     D LFI T+R  +  + WD ++  
Sbjct: 63   AKLSRPPLPSKPPPQPQSLDHQLPLQPAPFRPQ---TDILFIGTDRASYFTVSWDQKTKN 119

Query: 99   LIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIP----FDNKG----- 148
            L T R   D++D   R +  G   +IDP  R + L LY+G+  VIP      ++G     
Sbjct: 120  LRTERKYVDLADPSARASQLGDRCLIDPSGRFLTLELYEGIVTVIPIGQPLRSRGSGRRL 179

Query: 149  ---------------------------QLKEAFNIRLEELQVLDIKFLYGCAK--PTIVV 179
                                       +L E    R+EEL V    FL+  A   P + +
Sbjct: 180  GKRAANASASAAYANQDAAAGAAAADLELGEPCQARVEELLVRSSTFLHTQADTLPRMAL 239

Query: 180  LYQDNKDARHVKTYEV---------------------------ALKDKDFVEGPWSQNNL 212
            LY+D      +K  E+                            LK  D +     +  L
Sbjct: 240  LYEDTMGKVRLKVRELEVMHGGMGMGGGTGSGGGIGADGGIVAVLKGLDLL-----KEEL 294

Query: 213  DNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIR-PSITKAYGRVDADGSRYL 269
            + GA  L+PVP PL G+L++GE +I Y   ++N   + P++  +I  A+ +VD  G R+L
Sbjct: 295  EMGASFLVPVPAPLGGLLVLGETSIRYLDDASNECISQPLKEATIFVAWEQVD--GQRWL 352

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L+++      V   K++LLG+   AS + Y+   + +IGS  GDS+LI++
Sbjct: 353  LADDYGRLFFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQGDSELIRI 412

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKD 376
                  +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ D
Sbjct: 413  T-----EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFND 466

Query: 377  GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            GSLR VR+G+G+ E   +  ++ I  +W+LR +    F   L+VSF+ ETR+     + E
Sbjct: 467  GSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGE 526

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE E   G      TL   +  + +++QVT  +VR+       +  EW      ++  A
Sbjct: 527  VEEKEEFMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQTKAITAA 586

Query: 495  TANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 553
            ++N   ++L  GG  L+  +I GD  +T  K   ++ ++S + +     +P+ + I  + 
Sbjct: 587  SSNDDHLVLMVGGQVLMIFDISGDINITGEKDFGVDTQVSGVTVT---TSPARACILCLP 643

Query: 554  MWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFL 609
               ++ V   SLPDL +     LG  G+ +PRSVL+        + L  ++ DG + +F 
Sbjct: 644  QTAEVVV--MSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFS 701

Query: 610  LNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 668
             N +   LT   K++LG+ QP   +        +VFA  ++P++IY+   +++YS VN  
Sbjct: 702  FNSEDFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSD 761

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFA 728
            + S +C FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F 
Sbjct: 762  QASRICHFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRRVAYSAPERAFG 821

Query: 729  ICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DS---- 780
            I ++K   +  AE     F+ L D+  F  +  Y L+  E   S++   F D  DS    
Sbjct: 822  IGTIKRTLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVESVIRAQFPDGIDSEGND 880

Query: 781  --NVYYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 837
                 + VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++A
Sbjct: 881  LFKDLFVVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVA 940

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            A+ + + +Y           L     +      + +   G+ I V DLMKS+S++ Y+  
Sbjct: 941  ALMKTVVVYTLSKGQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQG 1000

Query: 898  EG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
                  ++ E AR +   W +AV  + +D +L ++   NL  + +N  G TD++R RLEV
Sbjct: 1001 ANGLPDSLTEVARHFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEV 1060

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
              E  LGE VNR R  + +     ++    P    GTV G I +   +       L +LQ
Sbjct: 1061 TSEISLGEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQ 1119

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------ 1066
            + +  ++   GG+   ++R+F N  ++  +   F+DG+LIE FL  S    +EI      
Sbjct: 1120 SAMAGMVVTPGGMPFNKFRAFRNTIRQAEEPYRFVDGELIERFLGCSVELQEEIVGKVIA 1179

Query: 1067 SKTMNVSVEELCKRVEELTRLH 1088
                 V+VE     VEEL R+H
Sbjct: 1180 DGVAGVTVESAKGLVEELRRMH 1201


>gi|156049323|ref|XP_001590628.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980]
 gi|154692767|gb|EDN92505.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1153

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 346/1170 (29%), Positives = 586/1170 (50%), Gaps = 108/1170 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+P++V  +   N    +E  L++AK  R+EI   T +GL       IYGRI+ L
Sbjct: 3    YLAPVHRPSSVRLTLRLNLLDHREECLVLAKANRLEIWKATEEGLTMAYSKSIYGRISML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  +P G   D LF+ T R ++  + W+  + +L T ++  D+S    R +++    ++D
Sbjct: 63   QKIQPAGSKTDHLFVGTVRAQYFTVMWNPNTHKLDTMQSFVDISQEHMRDSESRDRCLVD 122

Query: 125  PDCRLIGLHLYDGLFKVI----PFDNKGQ-LKEAFNIRLEELQVLDIKFLYGCAK-PTIV 178
            P  RL+ + LY+G+  ++    P   K   L++   +R+ E++V    FLY   K P + 
Sbjct: 123  PTGRLLVMELYEGVLNLVKIVKPRGGKTDYLEKPEQVRISEMKVRASAFLYTHTKQPKLA 182

Query: 179  VLYQDNKDARHVKTYEVALKDK-----DFVEGPWSQNNLDN---GADLLIPVP------- 223
            +LYQD ++  ++ TY + L DK      F      +N+LD+   GA  +IPVP       
Sbjct: 183  LLYQDARENVNLATYRM-LDDKGHPNLQFDPKKNRENDLDDLCVGAMHIIPVPKGEDEGS 241

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAY---GRVDADGSRY 268
                          L GV+++GE    Y    + KAI +  ++ +A         D   Y
Sbjct: 242  KRYIVRNATTAKANLGGVVVLGETKFTYLDDES-KAI-VEYALDEAVLWAAWEPIDDRNY 299

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            LLGD  G L+L  I  +   VTG+K+  LG+ S  +++  L N V Y+ S   D+Q+I++
Sbjct: 300  LLGDDYGFLYLFTILVDGATVTGMKVLKLGQVSKPTSLENLGNGVFYVASHEADNQVIQI 359

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL---ERQ--------GQGQVVTCSGAYKDG 377
            +L   +    V VL+   N+ PI+DF ++D+   E Q        GQ ++VT SG ++ G
Sbjct: 360  DL--GSPNYSVTVLQVLPNIAPILDFTIMDMGGREGQTQLNEYSSGQARLVTGSGGFEGG 417

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            SLR VR+G+G+++ A + E++GI  +++L S    P DT LVVSF +ETR    +   ++
Sbjct: 418  SLRSVRSGVGLDDIAILAEMEGIHKVFALHSGPSLPNDT-LVVSFSTETRFFKFDSLGDI 476

Query: 437  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE   I    + ++TL  ++     ++QVT   V +     +   + W+ P G  +  A+
Sbjct: 477  EEVNTISNLSAASETLLTYNLDNGCILQVTQHEVAI---HGKSPGHRWQPPDGQIITAAS 533

Query: 496  ANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGM 554
             N + +LL++ G  LV L I    L EV   +L + +++C+ +  +        I  +G+
Sbjct: 534  GNQNYILLSSNGRTLVTLSIEQN-LAEVAFQELGDDQVACIHVPQL-----LGDIGVIGL 587

Query: 555  WTDISVRIFSLPDLNLITKEHL---GGEIIPR-----SVLLCAFEGISYLLCALGDGHLL 606
            W   S+ +  L  L  I  E L    G  IPR      +LL    G + L  ++ DG +L
Sbjct: 588  WKSGSISLLDLKTLKTIVSEDLRRNDGASIPRDIALTQILLPELSGPT-LFVSMEDGIVL 646

Query: 607  NFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNV 665
            +F ++ +   L+ RK + LGTQ   L+     NTT +VFA  + P++IY S  + +YS V
Sbjct: 647  SFDVDSENCSLSGRKSIVLGTQQARLQILPRDNTTFNVFATCEHPSLIYGSEGRTVYSAV 706

Query: 666  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 725
              ++   +C FNS A+PDS+ +A   EL +  ID+ ++ H+R++P+GE  RRI +  + R
Sbjct: 707  TAEDAITVCSFNSRAYPDSVVVATTNELKLSAIDNERRTHVRTLPIGETVRRIAYSAKER 766

Query: 726  TFAICSLKNQ-SCAEESEMHFVRLLDDQTFEFIST--YPLDTFEYGCSI----LSCSFSD 778
             FAI ++K + +  +E      RL+D+  F  +    Y     E   S+    L   + D
Sbjct: 767  AFAIGAIKRELTKGQEIVTTSFRLVDEVVFGELGEPFYLPANDEIIESVIRAELPTKYGD 826

Query: 779  DSNV-YYCVGTAYVLPEENEPTKGRILVFIV-EDGKLQLIAEKETKGAVYSLNAFNGKLL 836
               V  + VGT++ L +     +GR+L+F V  D    +IA    KG+   +   NGK++
Sbjct: 827  GELVERFLVGTSF-LHDGEVNIRGRLLIFGVNSDRTPYIIASHTLKGSCRCIGVLNGKIV 885

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
            AA+N+ + +Y +      T  L+    +      + +  RG+ I V D+MKS++L+ Y  
Sbjct: 886  AALNKTVVMYDYEETSRTTANLRKVATYRCATCPIDIDIRGNIIAVADIMKSVALVEYTP 945

Query: 897  E----EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 952
                    +EE  R     + +++  +D D YL ++++ NL  +++N EG T E++ RLE
Sbjct: 946  GVDGLPDKLEEVGRHAQQVFATSIAEVDTDTYLESDHDGNLIVLKRNREGVTREDKLRLE 1005

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
            V+ E +LGE VN+ +  ++       D   IP     T  G I + + +P +    L +L
Sbjct: 1006 VLCEMNLGEMVNKIKRINVET---SKDALLIPRAFVATTEGSIYLFSLIPPQNQDLLMRL 1062

Query: 1013 QTNLRKVIK--------------GVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLD 1057
            Q+ L  +                  G L+ +++RS+ +  ++T +   F+DG+LIE FLD
Sbjct: 1063 QSRLASLPARSLTDSSFSAPIEFSPGNLDFDKYRSYVSAVRETNEPFRFVDGELIERFLD 1122

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            L     + I   + V  E+L   VE L RL
Sbjct: 1123 LDGAIQENICDGLGVRAEDLRGVVEGLRRL 1152


>gi|378732825|gb|EHY59284.1| DNA damage-binding protein 1 [Exophiala dermatitidis NIH/UT8656]
          Length = 1185

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 350/1198 (29%), Positives = 581/1198 (48%), Gaps = 128/1198 (10%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y+V  H+P+ V H+   NF  P    LI+AK +R+EI+    +GL  +    +YG I  
Sbjct: 2    SYIVPIHRPSGVRHAIKLNFLDPNSDTLIVAKASRLEIYEQGTEGLGLLYSKTVYGYITI 61

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            LE  RP     D LF+ T+RY +    W+AE  +L T ++  D++D + R +       I
Sbjct: 62   LEKLRPASSQTDHLFVGTDRYHYFTCSWNAEIKQLRTEQSYVDLADNVLRNSKEVDRCHI 121

Query: 124  DPDCRLIGLHLYDGLFKVIPF---DNK------------GQLKEAFNIRLEELQVLDIKF 168
            DP  R + L LYDG+  V+PF    NK            G L E   +R+EEL      F
Sbjct: 122  DPTGRYMTLELYDGVISVLPFVQPSNKRVKRETTTNSPVGSLGEPVQVRVEELLTRSSAF 181

Query: 169  LYGCA----KPTIVVLYQDNKDARHVKTYEVAL---KDKDFVE----GPWSQNNLDNGAD 217
            L         P + +L++DN +   +K  E+      D+   E         + LD G  
Sbjct: 182  LETDPDTRENPKLAILWEDNLENPQLKLRELKYYPGGDQATAELETVAELHGDQLDKGVS 241

Query: 218  LLIPVPPPLCGVLIIGEETIVYCSAN----AFKAIPIRPSITKAYGRVDADGSRYLLGDH 273
             LIPV  P  G LI+G+  I Y          +A+    +I   + ++  D  R+LL D 
Sbjct: 242  HLIPVSAPYGGFLILGDHAIRYVDRGLTNVITQALEDNATIWTCWTKI--DDRRWLLADD 299

Query: 274  AGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPD 333
             G L  L+I     +V+  +++ +G  S A+ + YLD   V++GS  GDSQ++ +    +
Sbjct: 300  FGRLFFLMIEVSGGEVSSWRLDTVGVASKATCLVYLDEGYVFVGSHSGDSQVVHI----E 355

Query: 334  AKGSYVEVLERYVNLGPIVDFCVVDLER-------------QGQGQVVTCSGAYKDGSLR 380
             +G  V V++ + N+ PI+DF ++DL R              GQ ++VT SGA++DG++R
Sbjct: 356  EEG--VRVVQSFANIAPILDFTIMDLGRGAEAGGQQALEFSSGQARIVTASGAWQDGTIR 413

Query: 381  IVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET 439
             VR+G+G+ E  ++ EL  I  +W L S+        LVVSF++ETR+   + E  +EE 
Sbjct: 414  SVRSGVGLEELGTIGELSHITDLWGLSSTGQSDVQDVLVVSFVTETRVFKFDSEAAVEEV 473

Query: 440  -EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS-VNVATAN 497
             E         TL   +    +L Q+    +R+    S  L  EWK P   + +  A AN
Sbjct: 474  DEFHHLEFSQPTLLAANLPDRKLAQIYETGLRITDLESNMLTLEWKPPDSAAKITAACAN 533

Query: 498  ASQVLLATGGG--HLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 555
            +  +L+  GG   H+ +    +   T  K   L+ +IS + +       S S +  V  W
Sbjct: 534  SVHLLMVEGGHTLHVFHASNNEAKPTVSKSFPLDSQISSVTV-----ADSQSNVCIVSFW 588

Query: 556  TDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLN 611
               SV I  L  L+ +  + LG  G  IPRSVL+     +    L  A+ DG +L++  +
Sbjct: 589  QTASVAILDLHSLDTLYTQTLGTPGTDIPRSVLVAHVLPDAPPTLFIAMADGTVLSYSFD 648

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNT-----THVFAASDRPTVIYSSNKKLLYSNVN 666
            +    L+   ++ LGT+P+  +     N+     ++VFA+ ++P++IYSS  +++YS VN
Sbjct: 649  LAKHSLSGMTRILLGTEPVVFKQLPKDNSPDSNLSNVFASCEQPSLIYSSEGRIIYSAVN 708

Query: 667  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRT 726
             +  S +C FN  A+P+++A+A   EL +  I   +   ++++ +GE  R + ++  ++ 
Sbjct: 709  AESASRVCNFNCEAYPEAIAMATPTELKLALIGRERTTQLQTLSIGETVRCLTYEPTAKM 768

Query: 727  FAI-CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILSCSF--SDDSNV 782
            FA+ C  +      E+ +  V++ D+ +F+ + +  L   E   C + + SF   D+S  
Sbjct: 769  FAMGCIRRIMEGGTEALLSSVKIADEVSFKELDSVELQDRELVECIVSTGSFDTEDESKG 828

Query: 783  Y---YCVGTAYVLPEEN---EPTKGRILVFIV-EDGKLQLIAEKETKGAVYSLNAFNGKL 835
            Y   + VGT+ +L E++   E TKGRILVF V ++ KL+ + + + KGA  SL   +GK+
Sbjct: 829  YGDMFVVGTS-ILEEDDAGEEVTKGRILVFEVNKEKKLKAVTQIKVKGACRSLAMCDGKI 887

Query: 836  LAAINQKIQLYKWM---LRDDGTRELQSECGHHGHI--LALYV----QTRGDFIVVGDLM 886
            +A + + + LY  +    R + + ELQ    +      L+L V    Q     I V DLM
Sbjct: 888  VAGLVKTVVLYGLIPSSTRGEHSLELQKLATYRTSTNPLSLAVTPATQDSPALIAVADLM 947

Query: 887  KSISLLIY-----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 941
            KS+S+L        + E  + E +R +   W SA  +L  D ++ A+   NL T+R+ S 
Sbjct: 948  KSLSVLQVLPPDSSNSEYRLHETSRHFATLWSSATAVLRHDEWVVADMEGNLITLRQGSL 1007

Query: 942  GATDE----ERGRLEVVGEYHLGEFVNRF---------RHGSLVMRLPDSDVGQ------ 982
             A +      R RLEV GE+ LGE VN+          R     M     D G+      
Sbjct: 1008 DAENNGAVAARRRLEVTGEFRLGEVVNKIVSILPPGSQRQSDQKMVDVGLDGGKKPARTG 1067

Query: 983  ---IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
                P    GTV G I ++A++       L  LQ++L   ++  G +   ++R++  E  
Sbjct: 1068 PLVTPRTFLGTVEGAIYMLATINPAYVNVLLLLQSSLATRVQAPGYMPWAKYRAWKTEVL 1127

Query: 1040 TVDAK-NFLDGDLIES-FLDLSRTRMDEI-------SKTMNVSVEELCKRVEELTRLH 1088
              D     +DG+++E   + L    ++++        + +NVSVEE+    +EL RL+
Sbjct: 1128 EKDEPFRVVDGEMLEQGLVALDDRELEDVLREAGLMEEALNVSVEEVRGWADELRRLY 1185


>gi|327301962|ref|XP_003235673.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
 gi|326461015|gb|EGD86468.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
          Length = 1147

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 341/1171 (29%), Positives = 566/1171 (48%), Gaps = 114/1171 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F SP E  L++AK  R+E++  +  GL       IYGR+  L
Sbjct: 3    YVVPIHGASSIRHALRAKFISPDEDCLVVAKANRLELYTQSADGLVLQHSKAIYGRVTLL 62

Query: 66   ELFRPHGEAQ-----DFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQ 119
            +   P   A      D LF+ T++Y +  + WD    +L T R   D++D   R   +  
Sbjct: 63   KKL-PRSTAAGLALTDALFVGTDQYAYFSITWDPVHEQLRTERKYIDLADGSLREAHSDD 121

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPFDNKG---------------------QLKEAFNIRL 158
               IDP    + L +Y+G+  + P                          QL E   +R+
Sbjct: 122  RCQIDPSGSFLTLEVYEGVVSIFPLVTADSHKRAKSAVSASAFSASTSVEQLGEPLQVRI 181

Query: 159  EELQVLDIKFLYGCAK--PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNL---- 212
            EEL V    FL   A   P   +LY+D +    +K  ++          P S   L    
Sbjct: 182  EELMVRSSAFLDQEASNTPRFALLYEDTQGKVRLKLRDLKYTHAIITSDPGSAAELKDVT 241

Query: 213  ------DNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVD 262
                  D GA +LIPVP PL G+LIIGE +I Y   +  + I  RP    ++  A+ +VD
Sbjct: 242  TLSDEVDLGASILIPVPRPLGGLLIIGESSIKYVDVSRNETIS-RPLAESTVFVAWEQVD 300

Query: 263  ADGSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
              G R+LL D  G L  L+++      V   K++ LG TS AS + YLD  +V++GS  G
Sbjct: 301  --GQRWLLADDYGRLFFLMLVLDADNAVESWKVDFLGVTSRASVLVYLDGGIVFVGSHQG 358

Query: 322  DSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSG 372
            DSQ+I++      +G + ++++   N+ PI+DF ++D+  +         GQ ++VT SG
Sbjct: 359  DSQVIQIK-----EGGF-DLVQTISNIAPILDFTIMDMGDRSGATREFSSGQTRIVTGSG 412

Query: 373  AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            A+ DGSLR VR+G+GI E   +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   +
Sbjct: 413  AFGDGSLRSVRSGVGIEELGVLASMEHITDLWALRSACPEPFFDTLLVSFVNETRVFHFS 472

Query: 432  LEDELEETE--IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PG 488
             + ++EE E    G      TL   +   N+++QVT    R +   S  +   W+S    
Sbjct: 473  ADGDVEEKEDGFLGLVFSESTLLATNIPGNRILQVTESISRAIDVDSGMII--WRSSYEE 530

Query: 489  YSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI--NPIGENPSY 546
            +++  A+AN   ++L  GG  LV + +    L   +  + + ++S + I  +PI      
Sbjct: 531  FTITSASANDDYLVLVLGGTRLVCISLSTFELVGSRDFEADNQVSGMTIPASPI------ 584

Query: 547  SQIAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGD 602
             Q   V +     + I  LP L +  K+ LG  GE IPRSV++          L  ++ D
Sbjct: 585  -QACIVCLPQSAEIIILDLPGLEVKNKQTLGEPGEAIPRSVIVAEILPNKPPTLFVSMAD 643

Query: 603  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLL 661
            G + +F  ++    + +  K++LG++  + +     N  + VFA  D P++I++S  +++
Sbjct: 644  GTVFSFSFDVHAFAIFNSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIV 703

Query: 662  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 721
            YS V+    S +C  N+ A+P S+A++ + EL I  +D+ +   I ++P+    RR+ + 
Sbjct: 704  YSAVDSASASRICSLNTQAYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRRLAYS 763

Query: 722  EQSRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPL-----------DTFEYG 768
               + F + ++K +  +  EE    FV L D+  F  +STY L               +G
Sbjct: 764  PTEKAFGLGTVKRKISNGVEEVSSSFV-LADEILFRPLSTYDLRPDELVECVIRSQLNHG 822

Query: 769  CSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYS 827
               +  S S D    + VGTA++    ++  +GRILVF V   + L LI EK   GA  +
Sbjct: 823  KDEVGNSISKD---LFFVGTAFLDDVGDDHIRGRILVFEVNRSRELSLIVEKSLMGACRT 879

Query: 828  LNAFNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 886
            L   +  LL A + + + ++K      G   L+    +      + +   GD + V D+M
Sbjct: 880  LAVMDHTLLVAGLVKSVSVFKLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVM 939

Query: 887  KSISLLIY-KHEEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 941
            KS+SL+ Y + EEG      EE AR Y   W +AV  +++++YL A+   NL  +++N  
Sbjct: 940  KSMSLVQYTQAEEGEREPKFEEIARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNIT 999

Query: 942  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 1001
            G T+ +R RL+   E  LGE VNR  H  ++    ++ V      +  TV+G I +   +
Sbjct: 1000 GVTESDRKRLQPTSEIRLGEMVNRI-HPIVIQTYTETAVSA--RALLATVDGSIYLFGLI 1056

Query: 1002 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSR 1060
                   L +LQT +  +    G +   ++R+F       D    F+DG+LIE FL  + 
Sbjct: 1057 NPTYIDLLLRLQTAMGSITISPGEIPFSKYRAFRTTVHQSDEPFRFVDGELIERFLSCTP 1116

Query: 1061 TRMDEISKTMN---VSVEELCKRVEELTRLH 1088
               +EI   ++   V+V  L + +EEL R+H
Sbjct: 1117 GMQEEIVSRLDDSTVTVSSLKEMIEELRRMH 1147


>gi|295667673|ref|XP_002794386.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226286492|gb|EEH42058.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1195

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 348/1215 (28%), Positives = 568/1215 (46%), Gaps = 154/1215 (12%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F +P E  L++AK  R+E +  TP+GL       IYG++ TL
Sbjct: 3    YVVPIHHASSIRHALKLQFLNPGEDCLVVAKSNRLEFYSQTPEGLSLQYSKAIYGKVTTL 62

Query: 66   E-----------------------LFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT- 101
                                    LF P     D LFI T+R  +  + W+  +S+L T 
Sbjct: 63   AKLSRPPIQQQQPQTLSPPQIQQPLFLPQ---TDVLFIGTDRATYFTVSWNPVTSQLRTE 119

Query: 102  RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKG------------- 148
            R   D++D   R +  G   +IDP  + I L LY+G+  VIP                  
Sbjct: 120  RKYVDLADPSSRESQLGDRCLIDPSGKFITLELYEGIITVIPIGQPQRTARQGGRKYGKR 179

Query: 149  ----------------------QLKEAFNIRLEELQVLDIKFLYGCAK--PTIVVLYQDN 184
                                  +L E    R++EL V    FL+  A   P +  LY+D 
Sbjct: 180  AVTAQNQHDSSHIGNTNAAGEVELGEPCQARVDELLVRSSAFLHTQADMLPRMAFLYEDT 239

Query: 185  KDARHVKTYEV-----------------------ALKDKDFVEGPWSQNNLDNGADLLIP 221
                 +K  E+                        LK  D +     +  L+ GA  LIP
Sbjct: 240  MGQVRLKVRELEFTYGGMGIGTGGGAGQDTGCIAVLKALDLL-----KEELEMGASFLIP 294

Query: 222  VPPPLCGVLIIGEETIVYC--SANAFKAIPI-RPSITKAYGRVDADGSRYLLGDHAG-LL 277
            VP PL G+L++GE +I Y   + N   ++P+   +I  A+ +VD  G R+LL D  G L 
Sbjct: 295  VPAPLGGLLVLGETSIRYLDDATNECISLPLDEATIFVAWEQVD--GQRWLLADDYGRLF 352

Query: 278  HLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGS 337
             L++I  E   V   K++LLG    AS + YL   V +IGS  GDSQLI++      +GS
Sbjct: 353  FLMLILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTFIGSHQGDSQLIRIT-----EGS 407

Query: 338  YVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGI 386
            + EV++ + N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DGSLR VR+G+
Sbjct: 408  F-EVIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTGSGAFDDGSLRSVRSGV 466

Query: 387  GINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGF 444
            G+ E   +  ++ I  +W+LR +  + F   L+VSF+ E+R+     + E+EE  E  G 
Sbjct: 467  GMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDESRVFHFTQDGEVEEKDEFMGL 526

Query: 445  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 504
                 TL   +    +++QVT  +VR+       L   W  P   ++  A++N   ++L 
Sbjct: 527  GLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPSQKAITAASSNDDHLVLV 586

Query: 505  TGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 563
             GG  L+  +I G+  L   K    + ++S + +     +P+   I  +    +++V   
Sbjct: 587  VGGQVLMCFDIQGEIKLAGKKDFGDDTQVSGVTV---ASSPATYCILCLPQTAEVAV--M 641

Query: 564  SLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTD 619
            SL D+ +     +G  GE  PRSVL+        + L  ++ DG + +F  N     LT 
Sbjct: 642  SLADMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSMADGGVFSFSFNADEFTLTK 701

Query: 620  RKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS 678
              K+ LG+ QP   +        ++FA  ++P++IY++  +++YS V+  + S +C FNS
Sbjct: 702  MSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGRIIYSAVHSDQASRICHFNS 761

Query: 679  AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN--QS 736
             A+P S+A+A   EL I  +D  +   I ++ +GE  RR+ +    + F I ++K   ++
Sbjct: 762  EAYPGSIALATPTELKIAHVDSERTTQIHTLEIGETVRRVAYSAAEKAFGIGTIKRTLEN 821

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVY---YCVGT 788
             AE     F+ L D+  F  +  Y L   E   S++   F     SD +  +   + VGT
Sbjct: 822  GAEVITSRFM-LADEIMFRELDDYSLRPDELVESVIQAQFPEGKDSDGNESFKDMFVVGT 880

Query: 789  AYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 847
            +Y+        +GRIL F V   + L  +AE   KGA  +L     K++AA+ + + +Y 
Sbjct: 881  SYLDDVGEGSIRGRILAFEVTGSRQLAKVAELPVKGACRALAVMQDKIVAALMKTVVIYS 940

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEE 903
                +     L     +      + +   G+ I V DLMKS+S++ +K  E     ++ E
Sbjct: 941  IAKGELSDYTLNKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIIEFKQGENDQPDSLTE 1000

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFV 963
             AR +   W +AV  + ++++L ++   NL  + +N  G TD+++ RLEV  E  LGE V
Sbjct: 1001 VARHFQTLWSTAVAPIAENMFLESDAEGNLVVLNQNVNGVTDDDKRRLEVTSEILLGEMV 1060

Query: 964  NRFRHGSLVMRLPDSDVGQI---PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
            NR R  S+   LP +   +    P    GTV G I +   +       L +LQ+ +  ++
Sbjct: 1061 NRIRPVSIQGSLPATGPREAVISPKAFLGTVEGSIYLFGLINPAYQDLLMRLQSAMAGLV 1120

Query: 1021 KGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNVS 1073
               G +   ++R+F N  ++  +   F+DG+LIE F        +EI           V+
Sbjct: 1121 VTPGAMPFNKFRAFKNAVRQAEEPYRFVDGELIERFWTCEAALQEEIVGLVVAGGVAGVT 1180

Query: 1074 VEELCKRVEELTRLH 1088
            VE+  + VEEL R+H
Sbjct: 1181 VEKTKRIVEELRRMH 1195


>gi|46121747|ref|XP_385428.1| hypothetical protein FG05252.1 [Gibberella zeae PH-1]
          Length = 1161

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 320/1175 (27%), Positives = 575/1175 (48%), Gaps = 108/1175 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   H+ T++ H+   N   P+  +LI+AK  R+EI  LT +GL       I+G I+ L
Sbjct: 3    YVAPIHRATSIRHALRANVIDPEIDDLIVAKANRLEIWRLTEEGLVCQQTKLIHGTISML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGII 123
            +  RP G   D LFI T+R ++  L W+  + +L  I R + D+S+   R + +    ++
Sbjct: 63   QRLRPKGSETDLLFIGTDRLQYFNLIWNDATKQLETIERVIEDLSEPYMRQSQSQNKCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNK----GQLKEAFNIRLEELQVLDIKFLYGCAK-PTIV 178
            DP  R + +HL++G+  V     +     +L+    +RL EL +    F Y     PTI 
Sbjct: 123  DPTGRFLAMHLWEGVLNVFKLPTRKGSTNKLEVLDQVRLTELFMKASTFTYSYTNHPTIA 182

Query: 179  VLYQDNKDARHVK--TYEVALKDKDFVEG---PWSQNNL-----DNGADLLIPVP----- 223
             LY+   D    +   Y +   DK        P     L     D  A +LIPVP     
Sbjct: 183  FLYKTQMDQEETRLVIYRLTHDDKGNTVSKFDPHKDRELDIEIPDPYASMLIPVPLDEEK 242

Query: 224  -----------PPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDADGSRYL 269
                       P L G++++GE  + Y      +++      P I  A+   D+  +RYL
Sbjct: 243  RYNVRNNQGAKPHLGGLVVVGETLLTYYDGQTHRSVSAGLKDPRIFVAWAEYDS--TRYL 300

Query: 270  LGDHAGLLHLLVITHEKEK----VTGLKIELL------GETSIASTISYLDNAVVYIGSS 319
            L D  G L LL I    E     VTG+ +E          TS AS++ YL N  +++ S 
Sbjct: 301  LADDYGRLDLLTIRTNLEPTGVVVTGMTVEPFEFDNSPAITSRASSLVYLGNGNLFVASH 360

Query: 320  YGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQV 367
            +GDSQL ++N+  D K +   +++ + N  PI+DF ++D+  +            GQ ++
Sbjct: 361  HGDSQLYQINI--DTKAAM--LVQSFSNNAPILDFSIMDMGNREGDTQSGNVFSSGQSRI 416

Query: 368  VTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETR 426
            V   GAY+DG+LR +R+G+G+ ++  + EL+G +G+++L S   +  DT LVVS I+ETR
Sbjct: 417  VAGCGAYRDGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYGSEMVDT-LVVSSITETR 475

Query: 427  ILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 485
            IL+ + E  +EE    +G    ++TL   +    QL+Q+T  SV L+        ++W  
Sbjct: 476  ILSFDFEGGIEEIYSFQGMSLDSETLLASNLPSGQLLQITPKSVVLLDPEGGTTISKWDV 535

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY-----EISCLDINPI 540
            P G ++  A+AN+   LL+  G  LV L +   +    +    +      +ISC  I+  
Sbjct: 536  PDGKTITRASANSKWALLSVDGTSLVSLNLLQNLAVNAQQINNDSTSQPDQISC--IHAA 593

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFE--GIS 594
             ++P    +  VG W+   + +  +  L  +  E +        +PR V L       IS
Sbjct: 594  RDSP---DLGVVGWWSSGQISLIDMASLKPLHGESMRQTEDSATVPRDVALVQLHPPDIS 650

Query: 595  --YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPT 651
               LL A+ DG+++ F ++ K   ++ RK V+LG+ P  L     ++ T++VF  ++  +
Sbjct: 651  GPTLLVAMEDGNIVTFNVSTKGFSVSGRKSVTLGSNPARLHILPQEDGTSNVFVTTEHAS 710

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            +IYSS  ++++S     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++P+
Sbjct: 711  LIYSSEGRIIFSATTADDATFVAPFSSHAFPDSVVLSTDQHIRICHVDRERLTHVKALPV 770

Query: 712  GEHPRRICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTF-EFISTYPLD---TFE 766
             E  RR+ +    + F + S+K +    EE      RL+D+  F E  S +PL+   T E
Sbjct: 771  NETVRRVAYSPGLKAFGLGSIKRELVNNEEVVTSSFRLVDEIVFKELGSPFPLNGSSTLE 830

Query: 767  YGCSILSCSFSD---DSNVYYCVGTAYVLP---EENEPTKGRILVFIVE-DGKLQLIAEK 819
                ++     D   +    + VGT+++     E+   T GRILV  V+ + ++  I   
Sbjct: 831  LVECVIRAELPDVGGNPTERFIVGTSFISDGGVEDPNGTLGRILVLGVDANRQVYQIVSH 890

Query: 820  ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDF 879
              KG    L      ++A +++ + +Y +      +  LQ    +    + + +   G+ 
Sbjct: 891  NLKGPCRCLGMIEDNIVAGLSKTVVVYSFSQETSSSGSLQKLAAYRPAAIPIDIDVSGNM 950

Query: 880  IVVGDLMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 935
            I VGDLM+S+SL+ +       +  ++ERAR + + W +AV  ++ + +L A++  NL  
Sbjct: 951  IGVGDLMQSLSLVEFIPAQDGNKAQLQERARHFESLWTTAVCHIEGERWLEADSRGNLVV 1010

Query: 936  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGV 994
            +++N    T+++R R+E+  E  +GE +NR R     + +P ++   + P     +  G 
Sbjct: 1011 LQRNVNAPTEQDRRRMEITSEMGIGEQINRIRK----LNVPAAENNIVHPRAFLASAEGS 1066

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIE 1053
            + +   +  +    L   Q+ + + +  +G +  + WRSF N+ +  +    F+DG++IE
Sbjct: 1067 LYLYGDIAPQYQDLLMTFQSRMEECVLALGNVEFKLWRSFRNDNRESEGPYRFIDGEMIE 1126

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
             FLD+   + + +   +  +VE++   +EEL R+H
Sbjct: 1127 RFLDMGEEQQELVCDGLGPTVEDMRNMIEELRRMH 1161


>gi|310796681|gb|EFQ32142.1| CPSF A subunit region [Glomerella graminicola M1.001]
          Length = 1163

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 332/1182 (28%), Positives = 575/1182 (48%), Gaps = 118/1182 (9%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQEL-NLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
            +YV   H+P+++ H+     +   E  +L++A+  R+E+  +TP  +  +    +YG I 
Sbjct: 2    SYVAPIHRPSSIRHALSVRLSEDDETESLVVARSNRLEVWRVTPTDMYMLGSAVVYGTIL 61

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGI 122
             L+  RP     D LF+ T+R+++   +W   +  L T + + D ++   R   +    +
Sbjct: 62   LLQRLRPKDSNADLLFVGTDRFQYFTARWGPGTQRLHTEQVIEDAAEPHMRDAQSQDKCL 121

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDN-KGQ---LKEAF-NIRLEELQVLDIKFL-YGCAKPT 176
            +DP  R + +HL++G+  V+   N KGQ   L  A+  +RL EL V    F+      PT
Sbjct: 122  VDPTGRFMAMHLWEGVMNVMRLGNRKGQFARLDGAWEQVRLSELFVKASAFVPTDTGNPT 181

Query: 177  IVVLYQ---DNKDARHVKTYEVALKDKDF--------VEGPWSQNNLDNGADLLIPVP-- 223
            I  LYQ   D +DAR +  Y +   DK+          +  +  +  D  A ++IPVP  
Sbjct: 182  IAFLYQSNIDKEDAR-LAIYRLMGDDKNTNVSRFDPSKDREYELDIKDPYARIIIPVPII 240

Query: 224  ----------------PPLCGVLIIGEETIVYC---SANAFKAIPIRPSITKAYGRVDAD 264
                              L G++++GE  +VY    +    +     P+I  A+   D  
Sbjct: 241  EDDVKRYHKRDTTGSKAQLGGLVVVGETLLVYVDTLTGTVVEEGLDSPAIFVAWAAYDH- 299

Query: 265  GSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
             + Y L D  G LHLL I  E   VTGL + +LG TS AS + Y+ + ++++GS YGDSQ
Sbjct: 300  -TNYFLSDDYGNLHLLTIQTEGVVVTGLFMRMLGVTSRASCLVYMGDGMLFLGSHYGDSQ 358

Query: 325  LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSGA 373
            L+ ++++ +      ++++   N+ PI+DF ++DL              GQ ++V   G 
Sbjct: 359  LLSVSVETET----TKLVQTIPNIAPILDFSIMDLGNAGDSQVGNAFSSGQARIVAGCGV 414

Query: 374  YKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNL 432
            +++GSLR +R+ +G+ +   ++ L+ ++G++SLRS      DT LVVSFI+ETR+   + 
Sbjct: 415  HQNGSLRSIRSSVGLEDIGVLDDLRDVRGLFSLRSYGSAKVDT-LVVSFITETRVFRFDP 473

Query: 433  EDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
            E  +EE  + +G      TL         L+Q+T+ +V ++ S S    + W  P G ++
Sbjct: 474  EGGIEEVFDFQGLVLDRPTLVATTLPSGHLLQITATAVTVLDSESGVTLSTWAVPDGKTI 533

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKH-----AQLEYEISCL----DINPIGE 542
              A+AN    LL+  G  LV L + D +  + +         E +ISC+    D++ IG 
Sbjct: 534  VNASANNKWALLSISGTTLVSLNLSDNLSAQEQVLCRPIGGQEDQISCIHAARDLDDIG- 592

Query: 543  NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISYL-- 596
                     VG W   SV I  L  L+ +  E +        +PR + L        L  
Sbjct: 593  --------VVGFWATGSVSIIHLGTLHALQGETVKQTDDSVSVPRDLALVQLHPPHLLGP 644

Query: 597  --LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF---SSKNTTHVFAASDRPT 651
                A+ DG +++F ++ +   L+ RK V+LG+Q   L        +  +++FA ++  +
Sbjct: 645  TLFVAMEDGQVVSFNVSKEDFSLSSRKSVTLGSQQAGLHILPRPGDEGISNIFATTEHSS 704

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            +IYSS  +++YS    ++V+++ PF+S AFPD++ +A    + I  ID  ++ H+  + L
Sbjct: 705  LIYSSEARVMYSAATAEDVTYIAPFDSEAFPDAIFLATNRNIRIAHIDPERRTHVNPLQL 764

Query: 712  GEHPRRICHQEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTFEFIST-YPLD---TFE 766
             E  RR+ +    R F I ++  + +  EE      +L+D+     +   + LD   + E
Sbjct: 765  RETVRRVAYSPALRAFGIGTIHRELTNNEEVVTSSFQLVDEIVLGVVGKPFHLDGSISAE 824

Query: 767  YGCSILSCSFSDDSNV---YYCVGTAYVLP---EENEPTKGRILVFIVE-DGKLQLIAEK 819
               S++     D        + VGT+Y+     +E+  TKGRILV  V+ D    LI   
Sbjct: 825  MVESVIRAELPDSMGQPAERFIVGTSYLADPDIDESGDTKGRILVLGVDSDKNPYLIVSH 884

Query: 820  ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDF 879
            E KGA  SL     KL+A +++ + +Y ++     +  L+           + +   G+ 
Sbjct: 885  ELKGACRSLGVMGEKLVAGLSKTVVVYDYVEESTTSGALRKLATFRPSTFPVDIDVHGNM 944

Query: 880  IVVGDLMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 935
            I + DLM+S++L+ +       +  + ERAR +   W ++V  L+   +L A+   NL  
Sbjct: 945  IGIADLMQSLTLVEFVPAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMV 1004

Query: 936  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 995
            +R+N    T+ +R ++EV GE+HLGE VN+ R   +    P+ +   IP     TV G +
Sbjct: 1005 LRRNPNAPTEHDRKQMEVTGEFHLGEQVNKIRSLDIT---PNENDPIIPKAFLATVEGSL 1061

Query: 996  GVIASLPHEQYLFLEKLQTNLRKVIKGVG--------GLNHEQWRSFNNEKKTVDAK-NF 1046
             V A +  E    L + Q  L +V++ +G        GL+   WR F N K+  +    F
Sbjct: 1062 YVFADIKSEYQSLLIQFQERLAEVVRALGQADGEPGSGLSFTTWRGFRNAKRAAEGPFRF 1121

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +DG+LIE FLDL   + + + + +  +VE +   VEEL R+H
Sbjct: 1122 VDGELIERFLDLDEAKQEAVVQGLGPTVESMRNLVEELKRMH 1163


>gi|425777692|gb|EKV15851.1| UV-damaged DNA binding protein, putative [Penicillium digitatum Pd1]
 gi|425779888|gb|EKV17916.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
            PHI26]
          Length = 1140

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 335/1163 (28%), Positives = 567/1163 (48%), Gaps = 105/1163 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H+ +++ H+   NF SP E  L+ AK +R+E + LTP G+   +   +  R+  L
Sbjct: 3    YVVPIHRASSIRHAVKLNFFSPDEECLVAAKASRLEFYTLTPDGIVLTVTRALNARVTML 62

Query: 66   -ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
              L  P     D +F+ T++Y +  + WD E++++ T R   D+++   R +      +I
Sbjct: 63   ARLPAPTNSPTDHIFVGTDQYNYFTITWDRETNDIKTARTCVDIAEPSSRESQCAPRCLI 122

Query: 124  DPDCRLIGLHLYDGLFKV---------------------IPFDNKGQLKEAFNIRLEELQ 162
            DP  R + L +Y+G+  V                      P    G+L +    R++EL 
Sbjct: 123  DPTGRFMTLEVYEGVIVVVPIVQPTKKRGRMSMAGSQPDFPL-QVGELDKPTTSRIDELF 181

Query: 163  VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEV--------ALKDKDF-----VEGPWSQ 209
            V    FL+  + P + +LY+DN+    ++  E+         L D  F     +EG    
Sbjct: 182  VRSSAFLHSESSPWLALLYEDNQQKVRLRIRELDFTPGSSGTLADATFKEVQKLEGGEFG 241

Query: 210  NNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDADGS 266
              LD G+  LIP+P PL G++++GE +I Y   NA   I       ++  A+ +VD+   
Sbjct: 242  QELDLGSSHLIPIPAPLGGLIVLGETSIKYIDDNANDVITRHLEEATVFVAWEKVDS--Q 299

Query: 267  RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
            R+LL D  G L  L  I +   ++   K+E LG+T+ AS + YL   ++++GS +GDSQ+
Sbjct: 300  RWLLADDYGRLFFLSFILNNLGEIDDWKLESLGKTARASVLVYLGGGMLFVGSHHGDSQV 359

Query: 326  IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAY 374
            ++L+      G+  EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+
Sbjct: 360  LRLD------GTSFEVIQTLSNIAPILDFTIMDLGNRTNESQTHEFSSGQARIVTGSGAF 413

Query: 375  KDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRS-STDDPFDTFLVVSFISETRILAMNL 432
             DG+LR +R+G+G+ +   + E++ I  +W L++ ST D  DT L+V+F+ ETR+   + 
Sbjct: 414  DDGTLRSLRSGVGMEDLGVLGEMEHISDLWGLQTRSTGDYLDT-LIVTFVDETRVFQFSP 472

Query: 433  EDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
            + E+EE +   G      TL        +++QVT     +    S  +  EW       +
Sbjct: 473  DGEVEELDNFLGLSLTESTLLATRLQGGRILQVTEQRALVADLESGMVIFEWVPQDQKLI 532

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDI--NPIGENPSYSQ 548
               + N   ++L   G  +   +I D + + ++K    + +IS L +   P G       
Sbjct: 533  TAVSTNEDHLVLVISGQIVASFDIRDNVQIIKLKDLGADQQISGLTVPSTPTG------- 585

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAFEGISY--LLCALGDGH 604
            +   G      V I  + D  ++  + LG  GE  PRSVL+      S   L  ++ DG 
Sbjct: 586  VFIAGFPQSAKVSILDIKDFAVLQTKSLGPPGESFPRSVLVAEVLANSQPTLFISMADGC 645

Query: 605  LLNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 663
            ++ F L+ +   L++  K+ LG+ QPI  +        +VFA  + P++IY S  +++YS
Sbjct: 646  VITFSLDSRDCSLSEMNKLILGSEQPIFKKLPKGDGLYNVFATCENPSLIYGSEGRIIYS 705

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
             VN    S +C  N+ A+PDS+A+A E EL I  +D  +   I+++P+G   RR+ +   
Sbjct: 706  AVNSDGASRVCHLNAEAYPDSIAVATEKELKIALVDRERTTQIQTLPMGSTVRRVAYSPS 765

Query: 724  SRTFAICSL--KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF--SDD 779
             + F I ++  K ++ AE  + HFV L D+  F  +    L   E   S++        D
Sbjct: 766  EKAFGIGTIDRKLENGAEVVKSHFV-LADEIMFRRLDALELGPDELVESVVRAELPAGKD 824

Query: 780  SNV------YYCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFN 832
             N        + VGTA+   ++ E  +GRIL+  V+ G KL  +AE    GA  +L    
Sbjct: 825  ENGKEIVKDRFVVGTAFADEDQEESIRGRILILEVDHGRKLSQVAELPVMGACRALAMMG 884

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
              ++AA+   + +Y+  + + G  +L+    +      + V    + I V DLMKS+ L+
Sbjct: 885  DCIVAAL---VVVYRVKINNVGPMKLEKLAAYRTSTAPVDVTVVDNLIAVADLMKSLCLI 941

Query: 893  IYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 948
             Y      E   + E  R Y   W +A+  + D+ +L ++   NL  + +N+ G T +++
Sbjct: 942  RYTPGHTGEPAKLTEVGRHYQTVWSTAIACVGDETFLQSDAEGNLIVLSRNTNGVTAQDK 1001

Query: 949  GRLEVVGEYHLGEFVNRFRHGSLVMRLPD-SDVGQIPTVIFGTVNGVIGVIASLPHEQYL 1007
             RL    E  LGE VNR R     + +P    V   P     TV G I + A +  E   
Sbjct: 1002 HRLIPTSEISLGEMVNRIRP----VHIPQLCSVMVTPRAFMATVEGSIFLFAVINPEHQD 1057

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEI 1066
            FL  LQ  L + +  +G L+ +++R F    ++  A   F+DG+LIE FL  + +  +EI
Sbjct: 1058 FLMTLQAALSQKLNSLGNLSFDKFRGFRTMVRSAAAPYRFVDGELIEQFLKCTPSMQEEI 1117

Query: 1067 SKTMNVS-VEELCKRVEELTRLH 1088
            ++ +  S V E+ + +E L RLH
Sbjct: 1118 AQEVGSSDVGEVKRLIEALRRLH 1140


>gi|19114492|ref|NP_593580.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe 972h-]
 gi|46395602|sp|O13807.1|DDB1_SCHPO RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|2330717|emb|CAB11219.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe]
          Length = 1072

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 309/1125 (27%), Positives = 575/1125 (51%), Gaps = 98/1125 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   HKP+++ ++    F +    N+I+AK   +E++      L  +    I+ +I  +
Sbjct: 3    YVTYLHKPSSIRNAVFCKFVNASSWNVIVAKVNCLEVYSYENNRLCLITSANIFAKIVNV 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITR-AMGDVSDRIGRPTDNGQIGIID 124
            + F+P     D + +AT+ +++  L WDA  + +     + D S+R  R + +G + ++D
Sbjct: 63   KAFKPVSSPTDHIIVATDSFRYFTLFWDANDNTVSNGIKIQDCSERSLRESQSGPLLLVD 122

Query: 125  PDCRLIGLHLYDGLFKVIPF----------DNKGQLKEAFNIRLEELQVLDIKFLYGCAK 174
            P  R+I LH+Y GL  +IP            N   L + F++R++EL V+DI  LY  ++
Sbjct: 123  PFQRVICLHVYQGLLTIIPIFKSKKRFMTSHNNPSLHDNFSVRIQELNVVDIAMLYNSSR 182

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGE 234
            P++ VLY+D+K   H+ TY++ +++++  E     ++++ G      +P    GV + GE
Sbjct: 183  PSLAVLYKDSKSIVHLSTYKINVREQEIDEDDVVCHDIEEGK----LIPSENGGVFVFGE 238

Query: 235  ETIVYCSAN--------AFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEK 286
              + Y S +         +      PSI+        D S Y++ D +G+L+        
Sbjct: 239  MYVYYISKDIQVSKLLLTYPITAFSPSISND-PETGLDSSIYIVADESGMLYKFKALFTD 297

Query: 287  EKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSY-VEVLERY 345
            E V+ +++E LGE+SIAS +  L +  +++GS + +S L  L L    K ++ +E+L+ +
Sbjct: 298  ETVS-MELEKLGESSIASCLIALPDNHLFVGSHFNNSVL--LQLPSITKNNHKLEILQNF 354

Query: 346  VNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL 405
            VN+ PI DF + D   Q    ++TCSGAYKDG+LRI+RN I I   A +E++GIK  +S+
Sbjct: 355  VNIAPISDFIIDD--DQTGSSIITCSGAYKDGTLRIIRNSINIENVALIEMEGIKDFFSV 412

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA------IY- 458
                +  +D ++ +S I ETR + ++          EG  S    L C ++      IY 
Sbjct: 413  SFRAN--YDNYIFLSLICETRAIIVSP---------EGVFSANHDLSCEESTIFVSTIYG 461

Query: 459  -NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 517
             +Q++Q+T+  +RL         + W SP   S+   ++ A  V +A  GG +++ E   
Sbjct: 462  NSQILQITTKEIRLFDGKK---LHSWISP--MSITCGSSFADNVCVAVAGGLILFFE--- 513

Query: 518  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT-DISVRIFSLPDLNLITKEHL 576
            GI TEV   Q + E+S L      EN  Y     VG+W+ DI +  +    ++L     L
Sbjct: 514  GI-TEVGRYQCDTEVSSLCFTE--ENVVY-----VGLWSADIIMLTYCQDGISLTHSLKL 565

Query: 577  GGEIIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDR--KKVSLGTQPITL 632
                IPRS++     G     L  +  +G++L F  N + G++ +   ++  LG  PI L
Sbjct: 566  TD--IPRSIVYSQKYGDDGGTLYVSTNNGYVLMF--NFQNGQVIEHSLRRNQLGVAPIIL 621

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
            + F SK    +FA  ++P ++Y  + KL+ + ++  E+ ++  + + +   ++       
Sbjct: 622  KHFDSKEKNAIFALGEKPQLMYYESDKLVITPLSCTEMLNISSYVNPSLGVNMLYCTNSY 681

Query: 693  LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA--EESEMHFVRLLD 750
            +++  + +I+ L+++++ +   PRRIC       F +C    +S    E+  + F+R+ +
Sbjct: 682  ISLAKMSEIRSLNVQTVSVKGFPRRICSNSLFY-FVLCMQLEESIGTQEQRLLSFLRVYE 740

Query: 751  DQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF-IVE 809
              T   I+ +  + +E   SI+    +DD  V   VGT +  P+++ P  GR++VF +  
Sbjct: 741  KNTLSEIAHHKFNEYEMVESII--LMNDDKRV--VVGTGFNFPDQDAPDSGRLMVFEMTS 796

Query: 810  DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHIL 869
            D  +++ AE + +G+V +L  +   ++A IN  + ++++   + GT  +++      + +
Sbjct: 797  DNNIEMQAEHKVQGSVNTLVLYKHLIVAGINASVCIFEY---EHGTMHVRNSIRTPTYTI 853

Query: 870  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
             + V    D I+  DLMKSI++L +  ++  + E ARDY+  W ++VEIL +  Y   E 
Sbjct: 854  DISVNQ--DEIIAADLMKSITVLQFIDDQ--LIEVARDYHPLWATSVEILSERKYFVTEA 909

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
            + N   + +++      +R +L    +++LGE +N+ RH + +   P       P ++  
Sbjct: 910  DGNAVILLRDNVSPQLSDRKKLRWYKKFYLGELINKTRHCTFIE--PQDKSLVTPQLLCA 967

Query: 990  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            TV+G + ++          L +LQ N+RKVI   GGL+H++W+ +  E +T    + +DG
Sbjct: 968  TVDGSLMIVGDAGMSNTPLLLQLQDNIRKVIPSFGGLSHKEWKEYRGENET-SPSDLIDG 1026

Query: 1050 DLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 1088
             LIES L L    ++EI         +++SV++L   +E L +LH
Sbjct: 1027 SLIESILGLREPILNEIVNGGHEGTKLDISVQDLKSIIENLEKLH 1071


>gi|320593036|gb|EFX05445.1| uv-damaged DNA-binding protein [Grosmannia clavigera kw1407]
          Length = 1504

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 337/1157 (29%), Positives = 563/1157 (48%), Gaps = 146/1157 (12%)

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTD 116
            I+G I+ L+  RP     + LF+ T+R+++  L WD ES  L T     DV ++  R + 
Sbjct: 368  IFGTISMLQSLRPIDSKTELLFVGTDRFEYFTLTWDMESHSLRTVDTFQDVGEKHLRDSQ 427

Query: 117  NGQIGIIDPDCRLIGLHLYDGLFKVIPF---------DNKGQLKEAFNIRLEELQVLDIK 167
            +    ++DP  R + L L++G+  V+           D+   L     +RL EL +    
Sbjct: 428  SQDRCLVDPSGRFMALLLWEGVLTVLRLQTRRDRARPDHMRHLVPMDQVRLSELFIKAST 487

Query: 168  FLYG-CAKPTIVVLYQDNKDARHVK--TYEVALKDKDFVEGPWSQNNL--------DNGA 216
            FL+    +P I  LYQ   D    K   Y +   D++   G +  N          D GA
Sbjct: 488  FLHSETGQPQIAFLYQSQGDRAEAKLSAYRLTAGDRNVDTGRFDANRDREISMDIDDPGA 547

Query: 217  DLLIPV-----------------PPPLCGVLIIGEETIVY--CSANAFKAIPIRP-SITK 256
             LLIPV                    L G+L++GE  ++Y   +      +P+R  SI  
Sbjct: 548  ALLIPVEKVEPAKRHNVRNTATATANLGGLLVVGETRLLYIDSTTKCTVEVPLRAASIFV 607

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYL-DNAVVY 315
            A+ R DA  + YLL D  G LHLL I      V  L +  +G+TS AS + YL D  +++
Sbjct: 608  AWARYDA--THYLLADEYGTLHLLTILVSGAVVDNLDVSPIGKTSRASCLVYLPDRRLLF 665

Query: 316  IGSSYGDSQLIKLNLQPDAKGSY-VEVLERYVNLGPIVDFCVVDLERQ------------ 362
            +GS  GDSQL +L+L     G + ++VL+   N+ P++DF V+D+  +            
Sbjct: 666  VGSHNGDSQLFRLDLAASPVGLHELQVLQ---NIAPVLDFTVMDMGNREDDQQLANEYAS 722

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRS---STDDPFDTFLV 418
            GQ ++VT SG +KDGSLR VR+G+G+ +   + +L G++G++SLRS         DT LV
Sbjct: 723  GQARIVTGSGVHKDGSLRSVRSGVGLEDIGILGDLGGVRGLFSLRSPQTQQQQQVDT-LV 781

Query: 419  VSFISETRILAMNLEDELEETE-IEGFCSQTQTLFCHD-----AIYNQLVQVTSGSVRLV 472
             SF++ETR+   + + E+EE E   G    TQTL   +     +  ++L+Q+T GSV L 
Sbjct: 782  ASFLTETRVFLFDGDGEIEEVEAFPGLNLGTQTLLATNLSSGSSSSSRLLQITPGSVTLA 841

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYE 531
             + S  +   W  P   ++  A+AN+  VLL+  G  LV L + + + +   K      +
Sbjct: 842  ETASGTIVASWTPPDDRTIVSASANSRWVLLSVEGTTLVSLSLDNSLAVAAQKEVGTTDQ 901

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI--------IPR 583
            I+CL   P         +  VG W    V   S+ DL  +  +H G  +        +PR
Sbjct: 902  IACLHAAP-----QLLDVGVVGQWASGMV---SVVDLATLEPKHGGKSLRRRDDNASVPR 953

Query: 584  SVLLCAF--EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF--SS 637
            S++L      G++   L  A+ DG+++ F ++     L+ RK V LGT+   L     S 
Sbjct: 954  SIVLAQVLPPGMAGPTLFVAMDDGNVITFAVSPSDLSLSGRKSVVLGTRHARLHPLPQSD 1013

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
            + T  +FA ++ P++IY S  ++ Y+ V  ++ + +C F++AAFP ++A+A + ++ +  
Sbjct: 1014 EATYSIFATTEHPSLIYGSEGRIAYAAVTAEDANFVCHFDAAAFPGAIAVATDSQIKLSR 1073

Query: 698  IDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTFEF 756
             D  ++ H+R+I +GE  RRI +    R FA+  +K + +   E     ++L+D+  F+ 
Sbjct: 1074 TDTTKQTHVRAIDMGETIRRIAYSATERVFALGCIKRELTQGREVVTSSLKLVDEVAFQP 1133

Query: 757  ISTYPLDTFEYGCSILSCSFS-------DDSNVYYCVGTAYVLP--EENEPTKGRILVFI 807
            +   PL     G  ++ C           +    + VGT+++     ENE T GRILV  
Sbjct: 1134 LGK-PLALEVEGTELVECVVRAELRDALGNPAERFLVGTSFMAAGSSENEHTLGRILVVG 1192

Query: 808  VE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 866
            V+ D    +++    +G    L   +  ++A +++ + L ++      + EL+    +  
Sbjct: 1193 VDSDHSPYIVSSHRVRGPCRCLAMVDDLIVAGLSKTVVLSRYTETSSMSGELKKVASYRT 1252

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIY-------------------KHEEG-------- 899
                + +   G  I VGD+MKS +L+ Y                   K  +G        
Sbjct: 1253 ATYVVDLAVDGHMIAVGDMMKSTALVEYIPATSGDGEDEEDDGAGDNKKGKGKTADRSKT 1312

Query: 900  -----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
                  + ERAR Y A+W +AV  ++ D++L A+   NL  + ++ +G T +++ RL  V
Sbjct: 1313 IAEGPKLVERARGYQASWATAVCHVEGDLWLEADGFGNLTMLERDVQGVTADDKRRLRTV 1372

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
            GE +LGE VNR R  ++     ++  G +  P     TV G I ++ ++  E    L  L
Sbjct: 1373 GEMYLGEMVNRIRPIAV-----ETSPGAMVHPRAFLATVEGSIYMVGTIAPEAQDLLMNL 1427

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
            QT L  ++KG G  +   +RSF N E+++ +   F+DG+L+E FLD+      E+++ + 
Sbjct: 1428 QTKLAAIVKGPGNTSFSAYRSFRNAERESTEPFRFVDGELLERFLDVGEDVQKEVAQGLG 1487

Query: 1072 VSVEELCKRVEELTRLH 1088
             SVE+L   +EEL RLH
Sbjct: 1488 PSVEDLRNIIEELKRLH 1504


>gi|326474493|gb|EGD98502.1| UV-damaged DNA binding protein [Trichophyton tonsurans CBS 112818]
 gi|326481558|gb|EGE05568.1| UV-damaged DNA binding protein [Trichophyton equinum CBS 127.97]
          Length = 1147

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 339/1168 (29%), Positives = 567/1168 (48%), Gaps = 108/1168 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F SP E  L++AK  R+E++  +  GL       IYGRI  L
Sbjct: 3    YVVPIHGASSIRHALRAKFISPDEDCLVVAKANRLELYTQSADGLILQHSRAIYGRITLL 62

Query: 66   ELFRPHGEAQ-----DFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQ 119
            +   P   A      D LF+ T++Y +  + WD +   L T R   D++D   R   +  
Sbjct: 63   KRL-PRSTAAGLALTDALFVGTDQYAYFSITWDPDHELLRTERKYIDLADGSLREAHSDD 121

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPFDNKG---------------------QLKEAFNIRL 158
               IDP    + L +Y+G+  + P                          QL E   +R 
Sbjct: 122  RCQIDPSGNFLTLEVYEGVVSIFPLVTTDSHKRAKSAVSASASAASTSIEQLGEPLQVRT 181

Query: 159  EELQVLDIKFLYGCAK--PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWS-------- 208
            EEL V    FL   A   P   +LY+D +    +   ++          P S        
Sbjct: 182  EELMVRSSAFLDQEASNTPRFALLYEDTQGQVRLTLRDLKYTHAIVTSDPGSAAELKYVT 241

Query: 209  --QNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVD 262
               + ++ GA +LIPVP PL G+L+IGE +I Y   +  + I  RP    ++  A+ +VD
Sbjct: 242  TLSDEIELGASILIPVPRPLGGLLVIGESSIKYVDVSKNETIS-RPLAESTVFVAWEQVD 300

Query: 263  ADGSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
              G R+LL D  G L  L+++      V   K++ LG TS AS + YLD  +V++GS  G
Sbjct: 301  --GQRWLLADDYGRLFFLMLVLDTDNAVESWKVDYLGVTSRASVLVYLDGGIVFVGSHQG 358

Query: 322  DSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSG 372
            DSQ+I++      +G + ++++   N+ PI+DF ++D+  +         GQ ++VT SG
Sbjct: 359  DSQVIQIK-----EGGF-DLIQTISNIAPILDFTIMDMGDRLGATREFSSGQTRIVTGSG 412

Query: 373  AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            A+ DGSLR VR+G+GI E   +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   +
Sbjct: 413  AFGDGSLRSVRSGVGIEELGVLASMEHITDLWALRSACPEPFSDTLLVSFVNETRVFHFS 472

Query: 432  LEDELEETE--IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PG 488
             + ++EE E    G      TL   +   N+++QVT  S R++      +   W+S    
Sbjct: 473  ADGDVEEKEDGFLGLVFSQSTLLATNIPGNRILQVTESSSRVIDIDGGMII--WRSTYEE 530

Query: 489  YSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI--NPIGENPSY 546
            +++  A+AN   ++L  GG  LV + +    L   +  + + ++S + I  +PI      
Sbjct: 531  FTITSASANDDYLVLVLGGIRLVCISLSTFELIGSREFEADNQVSGMTIPASPI------ 584

Query: 547  SQIAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGD 602
             Q   V +     + I  LP L +  K+ LG  GE IPRSV++          L  ++ D
Sbjct: 585  -QACIVCLPQSAEIVILGLPGLEVKNKQTLGEPGEAIPRSVIVAEILPNNPPTLFVSMAD 643

Query: 603  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLL 661
            G + +F  ++    + +  K++LG++  + +     N  + VFA  D P++I++S  +++
Sbjct: 644  GTVFSFSFDVHAFAIFNSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIV 703

Query: 662  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 721
            YS V+    S +C  N+ A+P S+A++ + EL I  +D+ +   I ++P+    RR+ + 
Sbjct: 704  YSAVDSASASRICSLNTQAYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRRLAYS 763

Query: 722  EQSRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILS-CSFS 777
               + F + ++K +  +  EE    FV L D+  F  +STY L   E   C I S  ++ 
Sbjct: 764  PVEKAFGLGTVKRKISNGVEEVSSSFV-LADEILFRPLSTYDLRPDELVECVIRSQLNYG 822

Query: 778  DD------SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNA 830
             D      S   + VGTA++    ++  +GRILVF V   + L LI EK   GA  +L  
Sbjct: 823  KDEVGNLISKDLFFVGTAFLDDVGDDHIRGRILVFEVNRSRELSLIVEKSLMGACRTLAV 882

Query: 831  FNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 889
             +  LL A + + + ++K      G   L+    +      + +    + + V D+MKS+
Sbjct: 883  MDQTLLVAGLVKSVSVFKLARGRFGNILLEKHAAYRTSTAPIDISVVDNTVAVADVMKSM 942

Query: 890  SLLIY-KHEEGA----IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
            SL+ Y + EEG      EE AR Y   W +AV  +++++YL A+   NL  +++N  G T
Sbjct: 943  SLVQYTQAEEGGQEPKFEEIARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVT 1002

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
            + +R RL+   E  LGE VNR  H  +V    ++ V      +  TV+G I +   +   
Sbjct: 1003 ESDRRRLQPTSEIRLGEMVNRI-HPIVVQTHTETAVSA--RALLATVDGSIYLFGLINPN 1059

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRM 1063
                L +LQT +  +    G +   ++R+F    +  D    F+DG+LIE FL  +    
Sbjct: 1060 YVDLLLRLQTAMGSIATSPGEIPFSKYRAFRTTVRQSDEPFRFVDGELIERFLSCTLAMQ 1119

Query: 1064 DEISKTMN---VSVEELCKRVEELTRLH 1088
             EI   ++   V+V  L + +EEL R+H
Sbjct: 1120 QEIVGRLDDSTVTVSSLKEMIEELRRMH 1147


>gi|340960602|gb|EGS21783.1| hypothetical protein CTHT_0036510 [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1100

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 330/1114 (29%), Positives = 552/1114 (49%), Gaps = 105/1114 (9%)

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            L+  RP     D LF+AT+R+ +  L W+ ++  L T  +  D  +R  R + +    ++
Sbjct: 2    LQKLRPRDSKTDLLFVATDRFDYFTLLWNPQTFRLETVNSYKDPGERYMRDSQSQDRCLV 61

Query: 124  DPDCRLIGLHLYDGLFKVIPF----DNKGQLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  R + +HL++G+  V       +N   L+    +RL EL +    FLY     P + 
Sbjct: 62   DPSGRFMIMHLWEGVLNVWRMGHRKNNAMVLEWMEQVRLSELFIKASTFLYTETGHPKVA 121

Query: 179  VLYQDNKDARHVK--TYEVALKDKDFVEG---PWSQNNLD-----NGADLLIPV------ 222
             LYQ   DA   K  TY +   D+D V     P     LD     + A +LIPV      
Sbjct: 122  FLYQTRADATDAKLATYRLTSDDRDTVASQFNPEKDRELDMEVRDSTASMLIPVRKVEEE 181

Query: 223  ------------PPPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRVDADGSR 267
                           L G++++GE  ++Y    +    +++   PSI  A+   +   + 
Sbjct: 182  VKRHNVRHVELAKAHLGGLIVVGETRLLYIDEVTKAKVESVLKEPSIFVAWAEYNV--TH 239

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            Y L D  G LHLL I      VTG+++  +GETS AST+ YL +  +++GS YG+SQL++
Sbjct: 240  YFLADDYGHLHLLRIKTNGVVVTGMEVSRIGETSRASTLVYLGDNYLFVGSHYGNSQLLR 299

Query: 328  LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYK 375
            L+L+       ++++E + N+GPI+DF ++D+  +            GQ ++VTCSG +K
Sbjct: 300  LDLENQNPKQRLQLIESFQNIGPILDFAIMDMGNRGDSGQPGNEYSSGQARIVTCSGVHK 359

Query: 376  DGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 434
            DG+LR VR+G+G+ +   + +L+  +G++SLRS      +  LV+SF++ETR+   + + 
Sbjct: 360  DGTLRSVRSGVGLEDIGILADLELCRGLFSLRSHGSLKTN-ILVMSFLTETRVFKFDHQG 418

Query: 435  ELEETEIEGFCSQT---QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
            ++E  E+  FC  T   QTL   D    Q++ VT  +  L+ + S      W    G  +
Sbjct: 419  DIE--ELSSFCGMTLDQQTLLAVDLPSGQILHVTPAAATLLDTESGVAITSWTPEEGRCI 476

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIA 550
              A+ANA  +LL+  G  LV L + + + + + K+     +I+CL +      P  S I 
Sbjct: 477  INASANAEWLLLSVDGVGLVSLSLSNDLRILKEKNLNQSDQIACLHV-----PPQSSGIG 531

Query: 551  AVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAF----EGISYLLCALGD 602
             VG WT  +V I  L  L  I  E L        IP+ + L            LL A  D
Sbjct: 532  VVGFWTSGTVSIIDLHTLEPIHGESLRTSKDDTSIPQDLALVQLLPPEVSGPLLLIATQD 591

Query: 603  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLL 661
            G++++F ++      + +++V LG           +N  + V A ++ P++IY S  +++
Sbjct: 592  GNVVSFNISSDYS-FSGKRRVVLGVTQAKFHLLPQENNLYSVLATTEHPSLIYGSEGRIV 650

Query: 662  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 721
            YS V  +E +++CPF+S AFPD +A+A + ++ +  +D  +K ++RS+PL E  RRI + 
Sbjct: 651  YSAVTAEEAAYVCPFDSEAFPDCVALATDSQIKLARLDRERKTYVRSLPLNEMVRRIAYS 710

Query: 722  EQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFEFI-STYPLDTFEYGCSILSCSFSDD 779
             + + F +  +K +    EE      +L+D+  F+ +  +  L +  Y   +   + ++ 
Sbjct: 711  PKEKVFGLGCIKRELVKGEEIVQSSFKLVDEVLFDRVGKSIELGSPSYTELVECVTRAEF 770

Query: 780  SNVY------YCVGTAYV-------LPEENEP-TKGRILVF-IVEDGKLQLIAEKETKGA 824
             + Y      + VGT+Y+        P    P  +GRILV  I  D     I   + KGA
Sbjct: 771  IDSYGNPAERFLVGTSYLPDPDYSPAPSHGNPEARGRILVLGIDSDRNPYQILSYQLKGA 830

Query: 825  VYSLNAF-NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 883
               L    +GK++  + + + + ++      T +L     +      + +   G  I V 
Sbjct: 831  CRCLAVMDDGKVVVGLTKAVTVCEYKETSSTTAQLTKLASYRPSTYPVEIAIHGRTIAVA 890

Query: 884  DLMKSISLLIY-KHEEGA---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
            DLMKSISL+ Y   EEG    + ERAR Y + W +AV  + + ++L A+   NL  +R+N
Sbjct: 891  DLMKSISLVDYIPAEEGGQAKLVERARHYQSAWSTAVGYVQNGLWLEADAQGNLQVLRQN 950

Query: 940  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 999
             +G T+++R R+E+  E +LGE VNR R  + V   P++ +  IP    GTV G I +  
Sbjct: 951  VDGITEDDRKRMELTAEINLGEMVNRIRSIT-VETSPEALI--IPRAFLGTVEGGIYMFG 1007

Query: 1000 SL-PHEQYLFLEKLQTNLRKVIKGVG---GLNHEQWRSFNNEKKTVDAK-NFLDGDLIES 1054
            ++ PH   L L + Q  +  VIK VG     N   +R+F N ++       FLDG+L+E 
Sbjct: 1008 TIAPHALDLLL-RFQEKVADVIKAVGDSDNANFRSYRAFKNAERVGHGPFRFLDGELLER 1066

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            FLD+     + I   +  +VE++   VEEL R+H
Sbjct: 1067 FLDVDEAIQEVICSGLGPTVEDMRNIVEELRRMH 1100


>gi|408393339|gb|EKJ72604.1| hypothetical protein FPSE_07241 [Fusarium pseudograminearum CS3096]
          Length = 1161

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 315/1170 (26%), Positives = 567/1170 (48%), Gaps = 98/1170 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV   H+ T++ H+   N   P+  +LI+AK  R+EI  LT +GL       I+G I+ L
Sbjct: 3    YVAPIHRATSIRHALRANVIDPEIDDLIVAKANRLEIWRLTEEGLLCQQTKLIHGTISML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGII 123
            +  RP G   D LFI T+R ++  L W+  + +L  I R + D+S+   R + +    ++
Sbjct: 63   QRLRPKGSETDLLFIGTDRLQYFNLIWNDATKQLETIERVIEDLSEPYMRQSQSQNKCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNK----GQLKEAFNIRLEELQVLDIKFLYGCAK-PTIV 178
            DP  R + +HL++G+  V     +     +L+    +RL EL +    F Y     PTI 
Sbjct: 123  DPTGRFLAMHLWEGVLNVFKLPTRKGSTNKLEVLDQVRLTELFMKASTFTYSYTNHPTIA 182

Query: 179  VLYQDNKDARHVK--TYEVALKDKDFVEG---PWSQNNL-----DNGADLLIPVP----- 223
             LY+   D    +   Y +   DK        P     L     D  A +LIPVP     
Sbjct: 183  FLYKTQMDQEETRLVIYRLTHDDKGNTVSKFDPHKDRELDIEIPDPYASMLIPVPLDEEK 242

Query: 224  -----------PPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDADGSRYL 269
                       P L G++++GE  + Y      +++      P I  A+   D+  +RYL
Sbjct: 243  RYHVRNNQGAKPHLGGLVVVGETLLTYYDGQTHRSVSAGLKDPRIFVAWAEYDS--TRYL 300

Query: 270  LGDHAGLLHLLVITHEKEK----VTGLKIELL------GETSIASTISYLDNAVVYIGSS 319
            L D  G L LL I    E     VTG+ +E          TS AS++ YL +  +++ S 
Sbjct: 301  LADDYGRLDLLTIRTNLEPTGVVVTGMTLEPFEFDKSPAITSRASSLVYLGDGNLFVASH 360

Query: 320  YGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQV 367
            +GDSQL ++N+   A    V +++ + N  PI+DF ++D+  +            GQ ++
Sbjct: 361  HGDSQLYQINIDTKA----VMLVQSFSNNAPILDFSIMDMGNREGDTQSGNVFSSGQSRI 416

Query: 368  VTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETR 426
            V   GAY+DG+LR +R+G+G+ ++  + EL+G +G+++L S      DT LVVS I+ETR
Sbjct: 417  VAGCGAYRDGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYGSKMVDT-LVVSSITETR 475

Query: 427  ILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 485
            IL+ +LE  +EE    +G    ++TL   +    QL+Q+T  SV L+        ++W  
Sbjct: 476  ILSFDLEGGIEEIYSFQGMSLDSETLLASNLPSGQLLQITPKSVVLLDPEGGTTISKWDV 535

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPS 545
            P G ++  A+AN+   LL+  G  LV L +   +    +    +       I+ I     
Sbjct: 536  PDGKTITRASANSKWALLSVDGTSLVSLNLLQNLAVNAQQINNDSTSQPDQISCIHAARD 595

Query: 546  YSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFE--GIS--YLL 597
               +   G W+   + +  +  L  +  E +        +PR V L       IS   LL
Sbjct: 596  PPDLGVAGWWSSGQISLIDMASLKPLHGESMRQTEDSATVPRDVALVQLHPPNISGPTLL 655

Query: 598  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSS 656
             A+ DG+++ F ++ K   ++ RK V+LG+ P  L     ++ T++VF  ++  ++IYSS
Sbjct: 656  VAMEDGNVVTFNVSTKGFSVSGRKSVTLGSNPARLHILPQEDGTSNVFVTTEHASLIYSS 715

Query: 657  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPR 716
              ++++S     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++P+ E  R
Sbjct: 716  EGRIIFSATTADDATFVAPFSSHAFPDSVVLSTDQHIRICHVDRERLTHVKALPVNETVR 775

Query: 717  RICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTF-EFISTYPLD---TFEYGCSI 771
            R+ +    + F + S+K +    EE      RL+D+  F E  S + L+   + E    +
Sbjct: 776  RVAYSPGLKAFGLGSIKRELVNNEEVVTSSFRLVDEIVFKELGSPFALNGSSSLELVECV 835

Query: 772  LSCSFSD---DSNVYYCVGTAYVLP---EENEPTKGRILVFIVE-DGKLQLIAEKETKGA 824
            +     D   +    + VGT+++     E+   T GRILV  V+ + ++  I     KG 
Sbjct: 836  IRAELPDVGGNPTERFIVGTSFISDGGVEDPNGTLGRILVLGVDANRQVYQIVSHNLKGP 895

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 884
               L      ++A +++ + +Y +      +  LQ    +    + + +   G+ I VGD
Sbjct: 896  CRCLGMIEDNIVAGLSKTVVVYSFSQETSSSGSLQKLAAYRPAAIPIDIDVSGNMIGVGD 955

Query: 885  LMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
            LM+S+SL+ +       +  ++ERAR + + W +AV  ++ + +L A++  NL  +++N 
Sbjct: 956  LMQSLSLVEFIPAQDGNKAQLQERARHFESLWTTAVCHIEGERWLEADSRGNLVVLQRNV 1015

Query: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIA 999
            +  T+++R RLE+  E  +GE +NR R     + +P ++   + P     +  G + +  
Sbjct: 1016 DAPTEQDRRRLEITSEMGIGEQINRIRK----LNVPAAENNIVHPRAFLASAEGSLYLYG 1071

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDL 1058
             +  +    L   Q+ + + +  +G +  + WRSF N+ +  +    F+DG++IE FLD+
Sbjct: 1072 DVAPQYQDLLMTFQSRMEECVLALGNVEFKLWRSFRNDNRESEGPYRFIDGEMIERFLDM 1131

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
               + + +   +  +VE++   +EEL R+H
Sbjct: 1132 DEEQQELVCDGLGPTVEDMRNLIEELRRMH 1161


>gi|226291941|gb|EEH47369.1| DNA damage-binding protein 1a [Paracoccidioides brasiliensis Pb18]
          Length = 1209

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 345/1224 (28%), Positives = 567/1224 (46%), Gaps = 158/1224 (12%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F +P E  L++AK  R+E +  TP+GL       IYG++ TL
Sbjct: 3    YVVPIHHASSIRHALKLQFLNPGEDCLVVAKSNRLEFYSQTPEGLSLQYSKAIYGKVTTL 62

Query: 66   E-------------------------------------LFRPHGEAQDFLFIATERYKFC 88
                                                  LF P     D LFI T+R  + 
Sbjct: 63   AKLSRPPIQQQQQQQQQQQQQQQQPQTQTQSPPQIQQPLFLPQ---TDVLFIGTDRATYF 119

Query: 89   VLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNK 147
             + W+  +S+L T R   D++D   R +  G   +IDP  + I L LY+G+  VIP    
Sbjct: 120  TVSWNPVTSQLRTERKYVDLADPSSRESQLGDRCLIDPSGKFITLELYEGIITVIPIGQP 179

Query: 148  G-----------------------------------QLKEAFNIRLEELQVLDIKFLYGC 172
                                                +L E    R++EL V    FL+  
Sbjct: 180  QRTARQSGRKYGKRAVTAQNQHDSSHIGNTNAAGEVELGEPCQARVDELLVRSSAFLHTQ 239

Query: 173  AK--PTIVVLYQDNKDARHVKTYEV--------------ALKDKD----FVEGPWSQNNL 212
            A   P +  LY+D      +K  E+              A +D      F      +  L
Sbjct: 240  ADMLPRMAFLYEDTMGQVRLKVRELEFTYGGMGIGTGGGAWQDTGCIAVFKALDLLKEEL 299

Query: 213  DNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPI-RPSITKAYGRVDADGSRYL 269
            + GA  LIPVP PL G+L++GE +I Y   + N   ++P+   +I  A+ +VD  G R+L
Sbjct: 300  EMGASFLIPVPAPLGGLLVLGETSIRYLDDATNECISLPLDEATIFVAWEQVD--GQRWL 357

Query: 270  LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L D  G L  L++I  E   V   K++LLG    AS + YL   V +IGS  GDSQLI++
Sbjct: 358  LADDYGRLFFLMLILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTFIGSHQGDSQLIRI 417

Query: 329  NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDG 377
                  +GS+ E+++ + N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG
Sbjct: 418  T-----EGSF-EIIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTGSGAFDDG 471

Query: 378  SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            SLR VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ ETR+     + E+
Sbjct: 472  SLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVFHFTQDGEV 531

Query: 437  EET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
            EE  E  G      TL   +    +++QVT  +VR+       L   W  P   ++  A+
Sbjct: 532  EEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPSQKAITAAS 591

Query: 496  ANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
            +N   ++L  GG  L+  +I G+  L   K    + ++S + +     +P+   I  +  
Sbjct: 592  SNDDHLVLVVGGQVLMCFDIQGEVKLAGKKDFGDDTQVSGVTVT---SSPATYCILCLPQ 648

Query: 555  WTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLL 610
              ++ V   +L D+ +     +G  GE  PRSVL+        + L  ++ DG + +F  
Sbjct: 649  TAEVVV--MNLEDMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSMADGRVFSFSF 706

Query: 611  NMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE 669
            N     L    K+ LG+ QP   +        ++FA  ++P++IY++  +++YS V+  +
Sbjct: 707  NADEFTLKKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGRIIYSAVHSDQ 766

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 729
             S +C FNS A+P S+A+A   EL I  +D  +   I ++ + E  RR+ +    + F I
Sbjct: 767  ASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEIDETVRRVAYSAAEKAFGI 826

Query: 730  CSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNV 782
             ++K   ++ AE     F+ L D+  F  +  Y L   E   S++   F     SD +  
Sbjct: 827  GTIKRTLENGAEVITSRFM-LADEIMFRELDDYSLRPDELVESVIQAQFPEGKDSDGNES 885

Query: 783  Y---YCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
            +   + VGT+Y+        +GRIL F V   + L  +AE   KGA  +L     K++AA
Sbjct: 886  FKDIFVVGTSYLDDVGEGSIRGRILAFEVTGSRQLAKVAELPVKGACRALAVVQDKIVAA 945

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + + + +Y     +     L     +      + +   G+ I V DLMKS+S++ +K  E
Sbjct: 946  LMKTVVIYSIAKGELSDYTLNKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIIEFKQGE 1005

Query: 899  G----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVV 954
                 ++ E AR +   W +AV  + ++++L ++   NL  + +N  G TD+++ RLEV 
Sbjct: 1006 NDQPDSLTEVARHFQTLWSTAVAPIAENMFLESDAEGNLVVLNRNVNGVTDDDKRRLEVT 1065

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQI---PTVIFGTVNGVIGVIASLPHEQYLFLEK 1011
             E  LGE VNR R  S+   LP +   +    P    GTV G I +   +       L +
Sbjct: 1066 SEILLGEMVNRIRPVSIQGSLPATGPREAVISPKAFLGTVEGSIYLFGLINPAYQDLLMR 1125

Query: 1012 LQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI---- 1066
            LQ+ +  ++   G +   ++R+F N  ++  +   F+DG+LIE F        +EI    
Sbjct: 1126 LQSAMAGLVVTPGAMPFNKFRAFKNAVRQAEEPYRFVDGELIERFWACETALQEEIVGLV 1185

Query: 1067 --SKTMNVSVEELCKRVEELTRLH 1088
                  +V+VE++ + VEEL R+H
Sbjct: 1186 VAGGVADVTVEKVKRIVEELRRMH 1209


>gi|116195210|ref|XP_001223417.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
 gi|88180116|gb|EAQ87584.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
          Length = 1127

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 322/1141 (28%), Positives = 549/1141 (48%), Gaps = 125/1141 (10%)

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTD 116
            + G I+ L+  RP     D LF+ TER+++  L W+ E+S+L T     D  +R  R + 
Sbjct: 2    VNGTISILQKLRPKDSKTDLLFVGTERFEYFTLAWNPETSQLHTIDPFTDPGERHMRDSQ 61

Query: 117  NGQIGIIDPDCRLIGLHLYDGLFKVIPF---DNKGQLKEAFNIRLEELQVLDIKFLYG-C 172
            +    ++DP  R + +HL++G+  ++      NK  L     +RL EL +    FLY   
Sbjct: 62   SQDRCLVDPSGRYLAMHLWEGVLTMLRLGERKNKRGLAWMDQVRLSELFIKASTFLYTET 121

Query: 173  AKPTIVVLYQDNKDARHVK--TYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV 222
              P I  LYQ   D+   K  TY + + D++     +  +          D  A +LIPV
Sbjct: 122  GHPKIAFLYQSRADSADAKLATYRMTIDDRNTEASKFDPDRDREIDTDIPDPSASILIPV 181

Query: 223  ------------------PPPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRV 261
                                 + G+L++GE  ++Y    +    ++   + SI  A+   
Sbjct: 182  RKVEEEVKRHNVRNVESAKAHIGGLLVVGETRLLYIDEVTKATVQSALKQASIFVAWAEY 241

Query: 262  DADGSRYLLGDHAGLLHLLVITHEKEK---VTGLKIELLGETSIASTISYLDNAVVYIGS 318
            +   + Y L D  G LHLL +  E      VT +++  +G+TS AS + +L   ++++ S
Sbjct: 242  NE--TNYFLADDYGNLHLLTLVRESPDSVVVTSMEVNRIGKTSRASHLVFLGGDMLFVAS 299

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQV 367
             YGDSQL +L+ Q +     +++++   N+GPI+DF ++D+ R            GQ ++
Sbjct: 300  HYGDSQLFRLDFQ-NEDVPPIQLVQTLANIGPILDFAIMDMGRGDEGQQGNEYSSGQARI 358

Query: 368  VTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETR 426
            VTCSG +KDGSLR VR+G+G+ +   + +L+  +G++SL++  + P    L  SF++ETR
Sbjct: 359  VTCSGVHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKT-YEAPKTNILAASFLTETR 417

Query: 427  ILAMNLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 485
            +   + + E+EE +   G     QTL        Q++QVT  +V L+ + S    + W  
Sbjct: 418  VFKFDPQGEVEELDSFAGMTFNQQTLLARCLSTAQILQVTPAAVTLLDAESGLTIDSWTP 477

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENP 544
                S+  A+ N   +LL+  G  LV   I   + L   K    + +I+C+ + P+    
Sbjct: 478  GAQKSIISASGNNKSLLLSVDGTELVLFSIDINLRLVRTKEIGYQDQIACIHVPPL---- 533

Query: 545  SYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAF---EGISYLL 597
              + +A VG W+  +V I  LP L  +  E L        IPR + L       G   L 
Sbjct: 534  -RNDLAVVGFWSSGTVSIIDLPSLEPMHGEQLRTSPDDASIPRDLALVKLLDNVGGGTLF 592

Query: 598  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV---FAASDRPTVIY 654
             A+ DG+++ F L+ +   LT RK+V LG +          +  H+   FA ++ P++IY
Sbjct: 593  VAMQDGNVITFNLS-ENFRLTGRKRVILGMRQARFHLLPQPDAPHIYSIFATTEHPSLIY 651

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
             S  +++YS V  +E +++CPF++ AFPD + +A + +L I  ID  ++ H++ +P+ E 
Sbjct: 652  GSEGRIVYSAVTAEEATYICPFDTEAFPDCIVLATDNQLKISHIDRERRTHVKPLPMNEM 711

Query: 715  PRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLD----TFEYG 768
             RRI +  + + F + C  +     EE      +L+D+  F+ +  T+PL     T    
Sbjct: 712  VRRIAYSPKEKVFGLGCIRRELVNGEEIVESSFKLVDEVIFDRVGKTFPLGVPSRTELVE 771

Query: 769  CSI---LSCSFSDDSNVYYCVGTAYVLPEENEP-------TKGRILVFIVE-DGKLQLIA 817
            C +   L  S+ + +   + VGT+++   +  P        +GR+LV  V+ D    L+ 
Sbjct: 772  CVVRAELRDSYGNPAE-RFLVGTSFLPDPDYGPGPGPAADARGRLLVLGVDADRNPYLVL 830

Query: 818  EKETKGAVYSLNAFN--------GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHIL 869
              + KGA   L            G ++A + + + + ++      T EL     +     
Sbjct: 831  SHDLKGACRCLAVLGEDAGPNAAGLIVAGLTKTVVVCRYDETSSTTAELTRLASYRPSSY 890

Query: 870  ALYVQTRGDFIVVGDLMKSISLLIY--------------------KHEEGAIEERARDYN 909
               +  RG  I V DLMKSISL+ Y                      +   + E AR ++
Sbjct: 891  PAEIAVRGSTIAVADLMKSISLVEYIPAGSSSGSGGGGSGSGESGSDDGPRLVEHARHFS 950

Query: 910  ANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHG 969
            + W +AV  +++  +L A+   NL  +R+N EG T E++ R+EV  E +L E VNR R  
Sbjct: 951  SVWATAVGFVEEGSWLEADAQGNLMVLRRNVEGVTAEDKRRMEVTSEINLNEMVNRIRTI 1010

Query: 970  SLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
              V   P + +  +P    GTV G I +  ++ PH Q L L + Q+ L  V+K  G +  
Sbjct: 1011 D-VETTPGAMI--VPKAFLGTVEGGIYMFGTVAPHVQDLLL-RFQSRLADVLKTAGDIEF 1066

Query: 1029 EQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
              +R+F N ++  D    F+DG+L+E FLD+  T  + + K +  +VE++   VEEL R+
Sbjct: 1067 RTYRAFRNAEREGDGPFRFVDGELLEKFLDVDETTQEAVCKGLGPTVEDMRNLVEELRRM 1126

Query: 1088 H 1088
            H
Sbjct: 1127 H 1127


>gi|258572939|ref|XP_002540651.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237900917|gb|EEP75318.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1144

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 329/1165 (28%), Positives = 581/1165 (49%), Gaps = 105/1165 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+V  H  ++++++    F  P E  L+IAK  R+E++   P GL       +YG+I+ L
Sbjct: 3    YIVPLHHASSISNAITLQFMKPGEDCLVIAKSNRLELYTKAPDGLALKYSKAVYGKISVL 62

Query: 66   E-LFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            + L RP+    D LF+ T+R  +  L W++ + +L T +   D++D   R + +G    +
Sbjct: 63   QKLPRPNPSETDLLFVGTDRDAYFTLSWNSATGQLHTEQKYVDMADPSLRDSQSGDRSWV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF------------------DNKGQLKEAFNIRLEELQVLD 165
            DP  + + L +Y+G+  VIP                     +  L E    R+EEL +  
Sbjct: 123  DPSGKFLTLEIYEGIITVIPIAQEPLKRSSLSGPSLGPPKERAHLGEPVQARIEELAIRS 182

Query: 166  IKFLYGCAK--PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWS----------QNNLD 213
              FL+  +   P I +LY+       +K  ++ +  +  V G  S           +NL+
Sbjct: 183  TAFLHQDSSRVPRIAILYESTDGRVKLKLRDL-IYTRGVVNGEASVAEFHNVDELYDNLE 241

Query: 214  NGADLLIPVPPPLCGVLIIGEETIVYCS--ANAFKAIPIR-PSITKAYGRVDADGSRYLL 270
             GA++L+PVP PL G+LI+GE+ I Y    +N    +P+   ++  A+ ++D    R+LL
Sbjct: 242  LGAEILVPVPLPLGGILILGEKCIKYVDTISNETITLPLEYNTVFVAWEQLD--NQRWLL 299

Query: 271  GDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN 329
             D  G L  L+++      V   K++LLGETS AS + +L   VV++GS  GDS +I++ 
Sbjct: 300  ADDYGRLFFLMLVLDSANAVRTWKVDLLGETSRASVLVHLGGGVVFLGSHQGDSHVIRIT 359

Query: 330  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGAYKDGSL 379
                 +GS+ E+++   N+ PI+DF V+DL  +G          Q ++VT SGA+ DGSL
Sbjct: 360  -----EGSF-EIIQTLSNIAPILDFTVMDLGHRGDTLTHEFSSGQARIVTGSGAFHDGSL 413

Query: 380  RIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            R VR+G+G+ +   +  ++ I  +W L +   +     L+++F++E+R+   + + E+EE
Sbjct: 414  RSVRSGVGMEDLGVLGAMEHITDLWGLSAFCAEENCDTLLLAFVNESRVFHFSPDGEVEE 473

Query: 439  T-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY-SVNVATA 496
              E  G      TL   +    +++QVT  + R+    S  +   W SP G+  +  A  
Sbjct: 474  KDEFLGLLLGETTLHASNLAGCRILQVTERTARITDVESELVIWHW-SPSGHQKITAAAV 532

Query: 497  NASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 555
            N   ++L  GG   V  +I   I ++  K  +   ++S + +     +P+ + I      
Sbjct: 533  NEQYLVLMIGGQEAVIFDIASDIQVSGPKTFKANKQVSGVTLT---SSPAQACIFCFPQS 589

Query: 556  TDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLN 611
             +IS  I +L DL +   E LG  G+ +PRSVL+          L  ++ DG + +F LN
Sbjct: 590  AEIS--IVNLTDLTIRHTETLGEPGDAVPRSVLVANMIPSKPPSLFVSMADGSVFSFSLN 647

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEV 670
             +   L++  K+ LG++    +     +   +VFA  D P++IY+S  +++YS VN  + 
Sbjct: 648  AEDYSLSNANKLVLGSEAPVFKLLPRGDGLFNVFATCDHPSLIYASEDRIVYSAVNSDKA 707

Query: 671  SHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAIC 730
            + +C FN+ A+P ++A+A   E+ I  +D  +   I+++ +    RRI +    R F + 
Sbjct: 708  TRICHFNAEAYPGAIAVATPDEIKIALVDAERTTQIQTLMINGTVRRIAYSAAERAFGLG 767

Query: 731  SLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILS--CSFSDDSNV--- 782
            +++      AEE + +F+ L D+  F  +S + L++ E   C I +   +F+   N    
Sbjct: 768  TVRRSLVQNAEEVKSYFI-LSDEIMFRQLSVFDLNSNELVECVIRTEHPAFNGQQNNGRP 826

Query: 783  --YYCVGTAYVLPEE--NEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLA 837
               + VGT+ + P E     TKGRIL+F V  + +L++++E   +GA  +L   NGK++A
Sbjct: 827  KDIFIVGTSVLDPAEAPESQTKGRILIFDVGVNRELRMVSEFPVRGACRALAMVNGKIVA 886

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            A+ + + +      +  + ++  E  +      + +    + IVV DLMKSISLL Y+  
Sbjct: 887  ALMKSVVILSMKKGNSYSIDIGKESSYRTSTAPVDLSVTDNIIVVADLMKSISLLEYQAG 946

Query: 898  EG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            E     +++E AR Y   W +    + ++ +L ++   NL  + +N+ G T++++ R+++
Sbjct: 947  EAGQPDSLKEVARHYQTLWTTTAAPIAENAFLVSDAEGNLVVLNRNTTGVTEDDKRRMQI 1006

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQ-IPTVIFGTVNGVI---GVIASLPHEQYLFL 1009
              E  LG  VNR R     M L  S     IP     T +G I   GVIA    +    L
Sbjct: 1007 TSELRLGTMVNRIRR----MDLQASQSSPVIPKAFLATTDGSIYLFGVIAQFAQD---LL 1059

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISK 1068
             +LQ+ L   +   GG+    +R+F +  +  D    F+DG+L+E FLD      + +  
Sbjct: 1060 MRLQSALASFVASPGGIPFSGYRAFKSATRQADEPFRFVDGELVEQFLDCPLEVQEAVLA 1119

Query: 1069 TM-----NVSVEELCKRVEELTRLH 1088
             M     +V++ +L   VE L R+H
Sbjct: 1120 KMDGGGRDVTLSQLKDIVERLKRMH 1144


>gi|429850956|gb|ELA26181.1| DNA damage-binding protein 1 [Colletotrichum gloeosporioides Nara
            gc5]
          Length = 1409

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 333/1178 (28%), Positives = 562/1178 (47%), Gaps = 140/1178 (11%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YV   H+P+++ H+     T  +E +L++++  R+E+  +TP  +  +  V IYG +  
Sbjct: 2    SYVAPIHRPSSIRHALRLRLTEDEE-SLVVSRSNRLEVWRVTPTDMFMLGSVSIYGTVLL 60

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            L+   P     D LF+ T+R+++   +WD++   L+T + + D  +   R   +    ++
Sbjct: 61   LQRLTPKDSKTDLLFVGTDRFQYFTARWDSDLQRLVTEQVIEDSGEPHMREAQSQDKCLV 120

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFN-----IRLEELQVLDIKFL-YGCAKPTI 177
            DP  R + +HL++G+  V+    +       +     +RL EL +    F+      PTI
Sbjct: 121  DPSGRFMAMHLWEGVMNVMRLGARAPHASRLDPLWEQVRLSELSMKASTFVPTETGHPTI 180

Query: 178  VVLYQ---DNKDAR-----------HVKTYEV-ALKDKDFVEGPWSQNNLDNGADLLIPV 222
              LYQ   D +DAR           + KT    A KD++F         LD  A +LIPV
Sbjct: 181  AFLYQSKIDKEDARLAIYRLMSDDRNTKTSNFDAEKDREF-----DMEILDPYARILIPV 235

Query: 223  P------------------PPLCGVLIIGEETIVYC---SANAFKAIPIRPSITKAYGRV 261
                                 L G++++GE  +VY    +     A    P+I  AY   
Sbjct: 236  SVEEDQVKRYHKRDTSAAKAQLGGLIVVGETLLVYVDTLTKTKVSAGIDNPTIFVAYAEY 295

Query: 262  DADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
            D     Y L D  G L LL I  +   VTGL++  LG TS AS + Y+ + ++++GS YG
Sbjct: 296  DV--RNYFLSDDYGNLQLLTIDTDGVVVTGLRVTHLGLTSRASCLVYMGDGMLFLGSHYG 353

Query: 322  DSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTC 370
            DSQL+K+++   A     ++++   N+ PI+DF ++DL              GQ ++V  
Sbjct: 354  DSQLLKVDVT--AGSETTQIVQTIPNIAPILDFAIMDLGNAGDSQVGNAFSSGQARIVAG 411

Query: 371  SGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILA 429
             G +++GSLR +R+ +G+ +   +E L  ++G++SLRS+  D  DT LVVSFI++TR+  
Sbjct: 412  CGVHQNGSLRSIRSSVGLEDIGVLEDLSDVRGLFSLRSNGSDKDDT-LVVSFITDTRVFR 470

Query: 430  MNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPG 488
             + E+ +EE  + +G      TL        QL+QVT+ S  L+        + W +P G
Sbjct: 471  FDAEEGIEEVFQFQGLGLDKPTLIASTLPNGQLLQVTANSAALLDPEGGITLSTWSAPEG 530

Query: 489  YSVNVATANASQVLLATGGGHLVYLEI-----------GDGILTEVKHAQLEYEISCLDI 537
              +  A++NA  VLL+  G  LV L +           G G+  E        +ISC+  
Sbjct: 531  KVIVNASSNAKWVLLSIDGTTLVSLSLLENLAAREQVLGSGVGGEGD------QISCIHA 584

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE----IIPRSVLLCAFEGI 593
                +N     +  VG W   S+ I  L  L+ +  E +        +PR++ L      
Sbjct: 585  ATDLDN-----VGVVGFWATGSISIIDLQTLDAMHGETIKQTDDSVSVPRNIAL------ 633

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT---THVFAASDRP 650
                       +++F ++     L+ RK V LG++   L      +T   ++VFA ++  
Sbjct: 634  -----------VVSFDVSKDNYSLSGRKSVILGSKQSGLHILPRPDTDGISNVFATTEHS 682

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
            ++IYSS  +++YS    ++V+++ PF+S AFPD++ +A +  + I  ID  ++ H+  +P
Sbjct: 683  SLIYSSEGRIIYSAATAEDVTYIAPFDSEAFPDAIVLATDKNVRIAHIDVERRTHVNPLP 742

Query: 711  LGEHPRRICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFEFIST-YPLD---TF 765
            L +  RR+ +    + F I +++ +    EE      +L+D+     +   + LD   T 
Sbjct: 743  LRQTVRRVAYSPALKAFGIGTIRRELFNNEEMVTSSFQLVDEIVLGVVGKPFHLDGAATT 802

Query: 766  EYGCSILSCSFSDDSNV---YYCVGTAYVL-PE--ENEPTKGRILVFIVE-DGKLQLIAE 818
            E   S++     D S      + VGT+Y+  PE  EN   KGRILV  V+ D     I  
Sbjct: 803  ELVESVIRAELPDSSGQPAERFIVGTSYLADPEMDENSEVKGRILVLGVDSDKNPYQIVS 862

Query: 819  KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 878
             E KGA  SL     KL+A +++ + +Y +      +  L            + +   G+
Sbjct: 863  HELKGACRSLAVMGDKLVAGLSKTVVVYDYAEESSTSGSLLKLATFRPSTFPVDLDVNGN 922

Query: 879  FIVVGDLMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
             I V DLM+S++L+ +       +  + ERAR +   W +AV  L+ D+++ A+   NL 
Sbjct: 923  MIGVADLMQSMTLIEFIPAQDGNKARLVERARHFQYIWATAVCHLEQDLWIEADAQGNLM 982

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
             +R+N    T+ ++ ++EV+ E+HLGE +N+ R   +V    D      P     T+ G 
Sbjct: 983  VLRRNPNAPTEHDKKQMEVISEFHLGEQINKIRPLDVVSGENDPIE---PKAFLATIEGS 1039

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVG-------GLNHEQWRSFNNEKKTVDAK-NF 1046
            I V A +  E    L + Q  L  VIK +G       GL+   WR F N K++ D    F
Sbjct: 1040 IYVFADIKPEYQSLLLQFQERLAGVIKTLGQADEPGAGLSFMSWRGFRNAKRSADGPFRF 1099

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +DG+LIE FLDL   R + + + +  +VE +   VEEL
Sbjct: 1100 VDGELIERFLDLDAGRQEAVVQGLGPTVERMRDLVEEL 1137


>gi|261193401|ref|XP_002623106.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
 gi|239588711|gb|EEQ71354.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
          Length = 1168

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 342/1208 (28%), Positives = 560/1208 (46%), Gaps = 167/1208 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F  P++  L++AK  R+E +  TP GL       IYG++  L
Sbjct: 3    YVVPIHHASSIRHALKLQFLEPEKDCLVVAKSNRLEFYSRTPDGLSLEHSKAIYGKVTML 62

Query: 66   -ELFRPHGEAQ-------------------------DFLFIATERYKFCVLQWDAESSEL 99
             +L RP    Q                         D LF+ T+R  +  + WD ++  L
Sbjct: 63   AKLSRPPLPTQPQSQPEPQTPDQRPQLQPAPFRPQTDILFVGTDRSTYFTVSWDQKTKNL 122

Query: 100  IT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIP----FDNKG------ 148
             T R   D++D   R +  G   +IDP  R + L LY+G+  VIP      ++G      
Sbjct: 123  HTERKYVDLADGSARESQLGDRCLIDPSGRFLTLELYEGIVTVIPIGQPLRSRGSGRKLG 182

Query: 149  ----------------------QLKEAFNIRLEELQVLDIKFLYGCAK--PTIVVLYQDN 184
                                  +L E    R+EEL V    FL+  A   P + +LY+D 
Sbjct: 183  KRAANASASTMQGNQDVGAADLELGEPCQARVEELLVRSSTFLHTQADMLPRMALLYEDT 242

Query: 185  KDARHVKTYEV---------------------------ALKDKDFVEGPWSQNNLDNGAD 217
                 +K  E+                            LK  D +     +  L+ GA 
Sbjct: 243  MGKVRLKVRELEVTYGGMGIGSGSGGGSGVGADGGSAAVLKGLDML-----KEELEMGAS 297

Query: 218  LLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIR-PSITKAYGRVDADGSRYLLGDHA 274
             L+PVP PL G+L++GE +I Y   ++N   + P+   +I  A+ +VD  G R+LL D  
Sbjct: 298  FLVPVPAPLGGLLVLGETSIRYLDDASNECISQPLEEATIFVAWEQVD--GQRWLLADDY 355

Query: 275  G-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPD 333
            G L  L++I      V   K++ LG    AS + Y+   V +IGS  GDSQLI++     
Sbjct: 356  GRLFFLMLILDSDNAVQSWKLDRLGNIPRASVLVYMGGGVTFIGSHQGDSQLIRIT---- 411

Query: 334  AKGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKDGSLRI 381
             +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ DGSLR 
Sbjct: 412  -EGSF-EVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIVTGSGAFNDGSLRS 469

Query: 382  VRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET- 439
            VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ ETR+     +  +EE  
Sbjct: 470  VRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRVFYFTPDGGVEEKD 529

Query: 440  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 499
            E  G      TL   +    +++QVT  +VR+       +  EW      ++  A++N  
Sbjct: 530  EFMGLGLTESTLIAANLPNGRILQVTERNVRVAELDGGMVMWEWSPVSQKAITAASSNDD 589

Query: 500  QVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDI 558
             ++L  GG  L+  +I G+  +   K   ++ ++S + +     +P+ S I  +    ++
Sbjct: 590  HLVLMVGGQVLMIFDIRGEIKVAGEKDFGVDTQVSGVTVT---ASPARSCILCLPQTAEV 646

Query: 559  SVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKT 614
             V   SL DL +     LG  G+ +PRSVL+        + L  ++ DG + +F  N   
Sbjct: 647  IV--MSLADLTIRHSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFSFNATD 704

Query: 615  GELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 673
              LT   K++LG+ QP   +        +VFA  ++P++IYS+  +++YS VN  + S +
Sbjct: 705  FSLTSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAEGRIVYSAVNSDQASRI 764

Query: 674  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK 733
            C FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F I ++K
Sbjct: 765  CHFNSEAYPASIALATPSELKIALVDAERTTQIQTLEVGETVRRVAYSAPERAFGIGTIK 824

Query: 734  N--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 791
               +  AE     F+ L D+  F  +  Y L+  E   S++   F DD +          
Sbjct: 825  RTLEDGAEVIASRFM-LADEIMFRELDVYDLNKDELVESVIRAQFPDDKD---------- 873

Query: 792  LPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
                   ++G  L+       L ++AE   KGA  +L     K++AA+ + + +Y     
Sbjct: 874  -------SEGEELM-----KDLFIVAEMPVKGACRALAIVQDKIVAALMKTVVVYTLSKG 921

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE----EGAIEERARD 907
                  L     +      + +   G+ I V DLMKS+S++ Y+       G++ E AR 
Sbjct: 922  QFADYILTKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIVEYQQGTDGLSGSLTEVARH 981

Query: 908  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
            +   W +AV  +  D +L ++   NL  +R+N  G T+++R RLEV  E  LGE VNR R
Sbjct: 982  FQTLWSTAVAPVAQDTWLESDAEGNLVVLRRNVNGVTEDDRRRLEVTSEVLLGEMVNRIR 1041

Query: 968  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
              ++   L  ++    P    GTV G I +   +       L +LQ+ +  ++   GG+ 
Sbjct: 1042 PVNIQASL-GTEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMAGMVVTPGGMP 1100

Query: 1028 HEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNVSVEELCKR 1080
              ++R+F N  ++  +   F+DG+LIE FL       +EI           V+VE +   
Sbjct: 1101 FNKFRAFRNTVRQAEEPYRFVDGELIERFLGCGAELQEEIVGKVIADGVAGVTVERVKAI 1160

Query: 1081 VEELTRLH 1088
            VEEL R+H
Sbjct: 1161 VEELKRMH 1168


>gi|224587439|gb|ACN58665.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 444

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/446 (49%), Positives = 284/446 (63%), Gaps = 54/446 (12%)

Query: 693  LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------------------- 733
            LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S +                   
Sbjct: 3    LTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSAST 62

Query: 734  --------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
                                  S  EE E+H + ++D  TFE +  +     EY  S++S
Sbjct: 63   QALSSSVSSSKLFPSSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVS 122

Query: 774  CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNG 833
            C    D +VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNG
Sbjct: 123  CRLGRDLSVYFIVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMMEFNG 182

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            KLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL 
Sbjct: 183  KLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLA 238

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
            YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ 
Sbjct: 239  YKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQE 298

Query: 954  VGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
            VG +HLGEFVN F HGSLV++ L +S      +V+FGTVNG+IG++ SL    Y  L  L
Sbjct: 299  VGVFHLGEFVNVFSHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDL 358

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
            Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLDL R +M E+  T+ +
Sbjct: 359  QNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQI 418

Query: 1073 ----------SVEELCKRVEELTRLH 1088
                      +V+E+ K VEELTR+H
Sbjct: 419  DDGSGMKREATVDEVIKIVEELTRIH 444


>gi|154286506|ref|XP_001544048.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407689|gb|EDN03230.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1158

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 336/1179 (28%), Positives = 554/1179 (46%), Gaps = 119/1179 (10%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F  P++  L++AK  R+E +  T  GL       IYG++  L
Sbjct: 3    YVVPIHHASSIRHAIKLQFLEPEKDCLVVAKSNRLEFYSQTHDGLSLEYSKAIYGKVTML 62

Query: 66   EL---------------------------FRPHGEAQDFLFIATERYKFCVLQWDAESSE 98
                                         FRP     D LFI T+R  +  + WD ++  
Sbjct: 63   AKLSRPPLPSKPPPQPQSLDHQLPLQPAPFRPQ---TDILFIGTDRASYFTVSWDQKTKN 119

Query: 99   LIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIP-------------- 143
            L T R   D++D   R +  G   +IDP  R + L LY+G+  VIP              
Sbjct: 120  LRTERKYVDLADPSARASQLGDRCLIDPSGRFLTLELYEGIVTVIPTLRPHDPQGLGGLG 179

Query: 144  -FDNKGQLKEAFNIRLEELQ------VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVA 196
                  +L +    R+EEL        L ++ L        +                VA
Sbjct: 180  AAAAGQELGDPCQARVEELSDTMGKVRLKVRELEVMHGGMRMGGGTGGGGGIGADGGIVA 239

Query: 197  -LKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIR-P 252
             LK  D +     +  L+ GA  L+PVP PL G+L++GE +I Y   ++N   + P++  
Sbjct: 240  VLKGLDLL-----KEELEMGASFLVPVPAPLGGLLVLGETSIRYLDDASNECISQPLKEA 294

Query: 253  SITKAYGRVDADGSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDN 311
            +I  A+ +VD  G R+LL D  G L  L+++      V   K++LLG+   AS + Y+  
Sbjct: 295  TIFVAWEQVD--GQRWLLADDYGRLFFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGG 352

Query: 312  AVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL------ERQ--- 362
             + +IGS  GD +LI++      +GS+ EV++ + N+ PI+DF ++DL      E Q   
Sbjct: 353  GITFIGSHQGDPELIRIT-----EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHE 406

Query: 363  ---GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLV 418
               GQ ++VT SGA+ DGSLR VR+G+G+ E   +  ++ I  +W+LR +    F   L+
Sbjct: 407  FSSGQARIVTGSGAFNDGSLRTVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLL 466

Query: 419  VSFISETRILAMNLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            VSF+ ETR+     + E+EE E   G      TL   +  + +++QVT  +VR+      
Sbjct: 467  VSFVDETRVFYFTPDGEVEEKEEFMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGG 526

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLD 536
             +  EW      ++  A++N   ++L  GG  L+  +I GD  +T  K    + ++S + 
Sbjct: 527  MVIWEWSPEQQKAITAASSNDDHLVLMVGGQVLMIFDIRGDINITGEKDFGFDTQVSGVT 586

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EG 592
            +     +P  + I  +    ++ V   SL DL +     LG  G+ +PRSVL+       
Sbjct: 587  VT---TSPVRACILCLPQTAEVVV--MSLSDLAIRRSTSLGEPGDAVPRSVLVAEVLSNN 641

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPT 651
             + L  ++ DG + +F  N++   LT   K++LG+ QP   +        +VFA  ++P 
Sbjct: 642  PATLFVSMADGSVFSFSFNLEDFSLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPR 701

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 711
            +IY+   +++YS VN    S +C FNS A+P S+A+A   EL I  +D  +   I+++ +
Sbjct: 702  LIYAVEGRIVYSAVNSGLASRICHFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEV 761

Query: 712  GEHPRRICHQEQSRTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC 769
            GE  RR+ +    R F I ++K   +  AE     F+ L D+  F  +  Y L+  E   
Sbjct: 762  GETVRRVAYSAPERAFGIGTIKRTLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVE 820

Query: 770  SILSCSFSDDSNV--------YYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKE 820
            S++   F D  +          + VGT+Y+        +GRIL F +  + +L  +AE  
Sbjct: 821  SVIRAQFPDGIDREGNDLFKDLFVVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMP 880

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 880
             KGA  +L     K++AA+ + + +Y           L     +      + +   G+ I
Sbjct: 881  VKGACRALAIVQDKIVAALMKTVVVYTISKGQFADYTLSKTASYRTSTAPIDIAVTGNLI 940

Query: 881  VVGDLMKSISLLIYKHEEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
             V DLMKS+S++ Y+        ++ E AR +   W +AV  + +D +L ++   NL  +
Sbjct: 941  AVADLMKSVSIVEYQQGSNGLPDSLTEVARHFQTLWSTAVAHVAEDTWLESDAEGNLVML 1000

Query: 937  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
             +N  G TD++R RLEV  E  LGE VNR R  + +     ++    P    GTV G I 
Sbjct: 1001 HRNVNGVTDDDRRRLEVTSEILLGEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIY 1059

Query: 997  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESF 1055
            +   +       L +LQ+ +  ++   GG+   ++R+F N  ++  +   F+DG+LIE F
Sbjct: 1060 LFGIINPTYQDLLMRLQSAMAGMVVTPGGMPFNKFRAFRNTIRQAEEPYRFVDGELIERF 1119

Query: 1056 LDLSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 1088
            L  S    +EI           V+VE +   VEEL R+H
Sbjct: 1120 LSCSVELQEEIVGKVIADGVTGVTVESVKGLVEELRRMH 1158


>gi|367033707|ref|XP_003666136.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
            42464]
 gi|347013408|gb|AEO60891.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
            42464]
          Length = 1043

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 310/1047 (29%), Positives = 525/1047 (50%), Gaps = 94/1047 (8%)

Query: 122  IIDPDCRLIGLHLYDGLFKVIPF---DNKGQLKEAFNIRLEELQVLDIKFLYG-CAKPTI 177
            ++DP  R + +HL++G+  ++      NK  L     +RL EL +    FLY     P I
Sbjct: 11   LVDPTGRFLAMHLWEGVLTMMRLGDRKNKMVLTWMDQVRLSELFIRASTFLYTETGHPKI 70

Query: 178  VVLYQDNKDARHVK--TYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV----- 222
              LYQ   D+   K  TY +   D++     ++            D+ A +LIPV     
Sbjct: 71   AFLYQSRADSGDAKLATYRMTADDRNTEASKFNPERDREIDMDVPDSSASMLIPVRKVEE 130

Query: 223  -------------PPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKA---YGRVDADGS 266
                            + G++++GE  ++Y   +    + ++ ++ +A       + +  
Sbjct: 131  GVKRHNVRNVESAKAHIGGLVVVGETRLLYI--DEVTKVTVQSALKEASIFVAWAEYNAV 188

Query: 267  RYLLGDHAGLLHLLVITHEKEK---VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
             Y L D  G LHLL +  E      VT L +  +G+TS AS + YL N ++++GS YGDS
Sbjct: 189  NYFLADDYGNLHLLTLVTENADSVVVTSLDVNWIGKTSRASHLVYLGNDLLFVGSHYGDS 248

Query: 324  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG------------QGQVVTCS 371
            QL +L+LQ +   + +++++   N+GPI+DF ++D+  +G            Q ++VTCS
Sbjct: 249  QLFRLDLQNEDPKALLQLVQTLHNIGPILDFAIMDMGNRGDEGQLGNEYSSGQARIVTCS 308

Query: 372  GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 430
            G +KDGSLR VR+G+G+ +   + +L+  +G++SL+S    P    L VSF++ETR+   
Sbjct: 309  GVHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKS-YGAPKTDILAVSFLTETRVFKF 367

Query: 431  NLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 489
            + + ++EE E   G     QTL   D    +L+QVT  +  ++ + S      WK     
Sbjct: 368  DAQGDVEELESFAGLAFDQQTLLATDLQGGRLLQVTPAAATVLDTESGLTVASWKPGDQR 427

Query: 490  SVNVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQ 548
            S+  A+AN+  +LL+  G  LV L I D + +   +    + +I+C+ +    +N     
Sbjct: 428  SIINASANSKSLLLSVDGTELVSLSISDDLQVVRTRDISKQDQIACIHVPAQPDN----- 482

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAF--EGIS--YLLCAL 600
            +  VG W+  +V I  L  L  I  E L        IPR + L      G+S   L  A+
Sbjct: 483  VGVVGFWSSGTVSIIDLHTLEPIHGESLRTSQDDASIPRDLALVQILPPGVSGPTLFVAM 542

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKK 659
             DG+++ F +  K   L+ RK+V LG +   L      +  + +FA ++ P++IY S  +
Sbjct: 543  QDGNVVTFNIT-KDLALSGRKRVILGMRQARLHLLPQPDGIYSIFATTEHPSLIYGSEGR 601

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            ++YS V  +E +++CPF++ AFP+ +A+A + +L I  ID  ++ H++ + + E  RRI 
Sbjct: 602  IVYSAVTAEEATYICPFDAQAFPECIALATDKQLKICHIDRERRTHVKPLAMNEMVRRIA 661

Query: 720  HQEQSRTFAICSLKNQSCA-EESEMHFVRLLDDQTFEFIS-TYPLDTFEYG----CSI-- 771
            +  + + F +  +K +  A EE      +L+D+  F+ +  ++PL    Y     C +  
Sbjct: 662  YSPKEKVFGLGCIKRELVAGEEVVQSSFKLVDEVIFDRVGRSFPLGAPSYTELVECVVRA 721

Query: 772  -LSCSFSDDSNVYYCVGTAYVLPEENEP---TKGRILVFIVE-DGKLQLIAEKETKGAVY 826
             L  S+ + +   + VGT+++   +  P    +GR+L F V+ D    LI   E KGA  
Sbjct: 722  ELRDSYGNPAE-RFIVGTSFLPDPDYGPGTDVRGRMLFFGVDADRNPYLILSHELKGACR 780

Query: 827  SLNAF-NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 885
             +    +G ++A + + + + ++      T EL     +        +  RG+ I V DL
Sbjct: 781  CVAVMEDGTIVAGLTKTVVVCRYEETSSTTGELTRLASYRPSSYPAEICVRGNTIAVADL 840

Query: 886  MKSISLLIYKHEEGA--IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 943
            MKS+SL+ Y   +G   + ERAR + + W +AV  + +  +L A+   NL  +R+N EG 
Sbjct: 841  MKSVSLVEYVPGDGTPRLVERARHFGSVWATAVGFVREGSWLEADAQGNLMVLRRNVEGV 900

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-P 1002
            T E+R R+E+  E +LGE VNR R    V   P + V  +P    GTV G I +  ++ P
Sbjct: 901  TAEDRRRMEITSEMNLGEMVNRIREVE-VETTPGALV--VPRAFLGTVEGGIYMFGTVAP 957

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRT 1061
            H Q L L + Q  L  V+K  G +    +R+F N ++  D    FLDG+L+E FLD+   
Sbjct: 958  HVQDLLL-RFQGKLADVLKTAGDIPFRSYRAFRNAEREGDGPFRFLDGELLERFLDVDEA 1016

Query: 1062 RMDEISKTMNVSVEELCKRVEELTRLH 1088
              + I K +  SVE++   VEEL R+H
Sbjct: 1017 TQEIICKGLGPSVEDMRNMVEELRRMH 1043


>gi|402083318|gb|EJT78336.1| hypothetical protein GGTG_03437 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1155

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 313/1167 (26%), Positives = 566/1167 (48%), Gaps = 98/1167 (8%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H+ ++V H+         E  L++AK  R+E+  +    L       I+G I  L
Sbjct: 3    YIAPIHRASSVRHALQVRLLPEGEPCLVLAKSNRLEVWQVAGGHLTLTHSKTIHGTIVML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIID 124
            +  +P     + + + T+R+++  + W+ E+ EL T +   D  ++  R        ++D
Sbjct: 63   QALQPKDSPTEMILVGTDRFRYFSVLWNQETRELETVQDFLDHGEQFVRDVTTRHRCLVD 122

Query: 125  PDCRLIGLHLYDGLFKVIPFDN-KGQLKEAFNI---RLEELQVLDIKFLYG-CAKPTIVV 179
            P  R I + ++ G+  V+     KG+ ++   +   R+ EL + D  FLY   A P +  
Sbjct: 123  PSGRFIVMLVWSGVINVMCLQRRKGKQRDLLLLDQSRISELYIKDAAFLYSEDAHPRVAF 182

Query: 180  LYQDNKDARHVK--TYEVALKDKDFVEGPWS--------QNNLDNGADLLIPVP------ 223
            LYQ   +    K   Y +   DKD     +          +  D GA +LIPV       
Sbjct: 183  LYQTKPNVPESKLVAYRLCSDDKDLEVSRFDPLKDRIIDIDIPDPGAVMLIPVERVESKR 242

Query: 224  ---------PPLCGVLIIGEETIVYC---SANAFKAIPIRPSITKAYGRVDADGSRYLLG 271
                       L G+L++GE  ++Y    +    +   + P +  A+ + DA  S Y+L 
Sbjct: 243  HHFRNPGADARLGGLLVVGETQVLYIDDMTQATVETALMSPMVFVAWAKCDA--SHYILA 300

Query: 272  DHAGLLHLLVITHEKEKVT--GLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN 329
            D  G LHLL +  +++ VT   + + L+G+ S A+ +  LD+  +++GS YGDS+L+ LN
Sbjct: 301  DDYGGLHLLTLDVKEDGVTVKDIIVCLIGKASRANELVCLDSGYLFVGSHYGDSELLCLN 360

Query: 330  L-QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKD 376
            L + D     VE ++   ++ PI+DF V+D+  +            GQ ++VT SGA++D
Sbjct: 361  LVREDTDRPLVETVQTLPSIAPILDFTVMDMGNREADNTVGNEYASGQARIVTGSGAHRD 420

Query: 377  GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
            GSLR VR+G+ +++   + ++ G++G++ L S+ +      LV SF++ETR+   + E +
Sbjct: 421  GSLRSVRSGVRLDDIGILADMPGVRGLFPLESNGET---NALVASFLTETRVFTFDAEGD 477

Query: 436  LEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
            +EE E  +G     ++L   +   + ++Q+T     ++   +    + W+ P G  +   
Sbjct: 478  IEEVEAFQGLDLSVRSLLVTNLGDDSILQITDHGASVIGPEAGITISSWEPPTGRVITGC 537

Query: 495  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 554
            + N   +LL+  G  LV L I D  ++  + +    +ISCL       +P    I AVG 
Sbjct: 538  STNGKWLLLSIDGKTLVSLRIPDLTVSTQRESSPNDQISCL-----AASPHLPDIGAVGF 592

Query: 555  WTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC----AFEGISYLLCALGDGHLL 606
            W+D SV I +L  L++I  E L       I+PR ++L     A      L  ++ DG ++
Sbjct: 593  WSDGSVSIINLCTLDVIHSETLRRTKDAAIVPRDIVLARVLPAEVAGPTLFVSMDDGEVV 652

Query: 607  NFLLNMKTGELTDRKKVSLGTQPITLRTFSSK-NTTHVFAASDRPTVIYSSNKKLLYSNV 665
             F LN   G+L+ RK V LGT+           +  ++F  S+  ++IY S+K+++YS V
Sbjct: 653  TFTLN-DVGKLSARKSVVLGTRQARFHVLPQPGDVCNIFVTSEHSSLIYGSDKRIIYSAV 711

Query: 666  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 725
              +  +++CPF++A FP SLA+A + EL I  ID  ++ H++S+P+GE+ R I +   +R
Sbjct: 712  TAESATYVCPFDTAVFPGSLAVATDSELKISKIDPQRQSHVQSLPMGENVRSIAYSAPTR 771

Query: 726  TFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTFEYGCSILSCSFSDDSNVY 783
             F + C  +  S   E      RL+D+   + + + + L+  E   +++     D     
Sbjct: 772  VFGLGCIRREISKGVEKASSTFRLVDEVVLQPLGNPFELNEGEVVETVIRAQLRDTFGRL 831

Query: 784  ---YCVGTAYVLPEENEP---TKGRILVFIVEDGKLQL-IAEKETKGAVYSLNAFNGKLL 836
               + VGT +++ E   P   +KGR+LVF V++ +    I     K     L      ++
Sbjct: 832  AERFIVGTRFLVDENLVPGSNSKGRVLVFGVDEERSPFQIVSHPLKSGCRRLAVMEEMIV 891

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-- 894
             A+ + + + ++      + +L     +     A+ V   G  I VGD+MKS+SL+ +  
Sbjct: 892  VALTKTVVVARYEELTSTSGKLIKVASYQTTSYAIDVAVEGRLIAVGDIMKSMSLVEFVP 951

Query: 895  ------------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 942
                          +   + E  R Y ++W +AV   + + +L A+ + N+  + +N+ G
Sbjct: 952  PTTVAGDGKAGETKKPAQLIEVCRHYQSSWSTAVAHFEGESWLEADADGNVMVLGRNTTG 1011

Query: 943  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP 1002
             T E+R R+E+  E +LGE +NR +  S V   P++ +   P     T  G I ++ ++ 
Sbjct: 1012 VTLEDRRRMEITSEINLGENINRIQKIS-VETGPNAPIH--PKAFLSTTEGSIYLVGAIA 1068

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRT 1061
             +    L  LQ  L   +  +G +  + +RSF N ++  D    F+DG+ IE FLD++  
Sbjct: 1069 PQMRDLLLNLQDRLEDYVGTLGNIPFKNFRSFRNAEREADGPVRFIDGEYIERFLDMNEE 1128

Query: 1062 RMDEISKTMNVSVEELCKRVEELTRLH 1088
               ++ + +  SVE++   VEEL  +H
Sbjct: 1129 TQSQVCRDLGPSVEDMRNLVEELKNMH 1155


>gi|342318986|gb|EGU10938.1| DNA damage-binding protein 1b [Rhodotorula glutinis ATCC 204091]
          Length = 1102

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 323/1150 (28%), Positives = 546/1150 (47%), Gaps = 153/1150 (13%)

Query: 24   FTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATE 83
            F  P +  L++ K  R+E   +    + P+L+VP++  IA+++     G+A   L + T 
Sbjct: 21   FFEPSQDCLVVNKLNRLEFSSIEDDAVNPLLEVPLFSTIASMQ----SGQATASLVVLTT 76

Query: 84   RYKFCVLQWDAESS-ELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVI 142
              +   L  D  S   + T A   +++  GR  +   I ++DP  R + +H Y GL +V+
Sbjct: 77   CLRLFALVHDPTSPYNVKTVASVSIAEPFGRLAEYQDI-LVDPANRCLLVHAYAGLVRVV 135

Query: 143  PF---DNKGQ-------------------LKEAFNIRLEELQVLDIKFLYGCA--KPTIV 178
            PF   D   Q                      ++N+RL  L V  +  +   A   P + 
Sbjct: 136  PFFIGDTPAQRGSRTATRLAGSPHGSPLDFSYSYNVRLPILNVASLAIVASSADDPPILA 195

Query: 179  VLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNL-DNGADLLIPVPPPLC-GVLIIGEET 236
             ++ ++   R + T+ ++LKDKD  EGP +   L D G++L++PV      G+L+ GEET
Sbjct: 196  GIHIEHTGTRTLSTFAISLKDKDLCEGPVAAFALADPGSELVLPVNEANAPGILVAGEET 255

Query: 237  IVY--------CSANAFKA---------IPIRPSITKAYGRVDADGSRYLLGDHAG-LLH 278
            + +         S+ A K          +  R  + +       +  R LLGD  G L  
Sbjct: 256  VTWVSLEERNGASSTASKGKGRAASQMLVSCRLPVARITAWSWRNNDRLLLGDIYGKLFE 315

Query: 279  LLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPD---AK 335
            + +   E   V+G+  + +G+ + AS I  L    VY+ S +GDSQ+++     D   A 
Sbjct: 316  VNLRRAENGVVSGISAQDVGDAASASAIVPLGATTVYLASRFGDSQIVRFVSGEDEGMAG 375

Query: 336  GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE 395
             + + +++   N+ PIVD C+V    Q     VTCSGAYK GSLR++R G+G++E A++E
Sbjct: 376  PAELALVDSISNIAPIVDLCIVSAHGQAANYAVTCSGAYKTGSLRVIRRGVGLSELAALE 435

Query: 396  LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED-------ELEETEIEGFCSQT 448
              G++  WSL S      +  LV+ F SETR+  M+  D       +++E +++ F S  
Sbjct: 436  ADGVQQAWSLTSPAPST-EPILVLGFFSETRVFRMSAGDPAGAEAVQIDEMDLQLFASPG 494

Query: 449  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS-PPGYSVNVATANASQVLLATGG 507
             T+F  + + + LV+VT+ +V   S    E    WK+   G     A A    ++LA  G
Sbjct: 495  PTIFAGN-VGSMLVRVTAEAVMYASDRGEE---SWKATSAGKITAAAAAGGDHLVLAFDG 550

Query: 508  GHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD 567
            G L  L+  +G  TE  +   E++I+ + +       S    A VG+WT  +V +  +PD
Sbjct: 551  GFLQLLKAKNGTFTESGNIAFEHDIASVSL----AETSAGAFAVVGLWTSQAVHLVGIPD 606

Query: 568  LNLITKEHLGGEIIPRSVLLCAF-EGISYLLCALGDGHLLNFLLNMKTGELTDR--KKVS 624
            L +   + +    + RS  L  F +G   L   LGDG L ++ +++    + D   K ++
Sbjct: 607  LAVYASQKITSTFLIRSAALINFGDGDYTLFVGLGDGTLASYRVDLAAPAVIDSTGKMIA 666

Query: 625  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
            LG +P+ L     ++   + A SDRPTVI  +  +L YS+     VS +   +  A  D 
Sbjct: 667  LGRRPLLLSEIGPESAKVLLAVSDRPTVISKARDRLNYSS----GVSSVANISHPALGDL 722

Query: 685  LAIAKEGELTIGTIDDIQKLHIRSIPLGE-HPRRICHQEQSRTFAI-CSLK--NQSCAEE 740
            +A+     + IG +D +QK+ +R++PL E  PRRI +   SR F + CS +  ++   ++
Sbjct: 723  VALVSREGVQIGRMDTVQKVDVRTVPLAEDEPRRIVYDPVSRKFCVACSRRDIDRHTGQQ 782

Query: 741  SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTK 800
            +    VRL+ + +FE  S + L+  E                                  
Sbjct: 783  AVTSVVRLVSEDSFETSSVFELERGE---------------------------------- 808

Query: 801  GRILVFIVEDGKLQLIAEKETKGAV-YSLNAFNG-----KLLAAINQKIQLYKWMLRDDG 854
                       + Q +A  E++G V +S + F       K  A ++  + +  W +  +G
Sbjct: 809  -----------EAQSLALVESQGTVAWSSSPFQKLETCVKFRAPVSAAVAV--WTIDSEG 855

Query: 855  TRELQSECGHHGHILALYVQTRG--DFIVVGDLMKSISLLIYKHE-EGAIEERARDYNAN 911
               L+S     G  +A Y   R   D ++VGD ++S+++L Y    +  + E A+DY + 
Sbjct: 856  ALALKSTW--SGAFVA-YTLARAPDDTLIVGDALRSLTVLRYTASPQPKLLEVAKDYRSR 912

Query: 912  WMSAVEILDDDI-----YLGAENNFNLFTVRKNSEGATDE--ERGRLEVVGEYHLGEFVN 964
            +M  VE L  D      Y+GAE + NLF V ++ + A         L+  G +HLGE V 
Sbjct: 913  YMVGVEDLGRDSTGADRYIGAETDLNLFAVSRHPQQAAGNLANAATLQDAGAFHLGELVT 972

Query: 965  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 1024
            RFR GSL   + D++   +P +++ T  G IGVIA L       L  L+ N+R+ +KGVG
Sbjct: 973  RFRTGSLGDLIGDANTTVVPRLVYSTSAGTIGVIADLDAASSRILSDLERNMREFVKGVG 1032

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK------TMNVSVEELC 1078
            GL  E+  +   +K    +  F+DGD ++SFLDLS+   +++ +       + V   E+ 
Sbjct: 1033 GLEQEELVAGVADKVKTPSTGFIDGDFVQSFLDLSKDVQEQVMQGKSEHERLTVDKAEIV 1092

Query: 1079 KRVEELTRLH 1088
            + +EE+ R+H
Sbjct: 1093 RLLEEVARVH 1102


>gi|346970653|gb|EGY14105.1| hypothetical protein VDAG_00787 [Verticillium dahliae VdLs.17]
          Length = 1160

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 323/1184 (27%), Positives = 560/1184 (47%), Gaps = 125/1184 (10%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y+V  H+P+++    + +   P E  L+ AK  R+EI   T +GL  +    + G I  
Sbjct: 2    SYIVPIHRPSSI-RLAISSRLWPDEDVLVTAKVNRLEISRPTSEGLTLLSSSVVCGTITL 60

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            L+  RP     D LF+ T+ +++   +WD    +L+T + + D+++   R   +    ++
Sbjct: 61   LQTLRPKASETDILFVGTDLFQYFTARWDPAQGKLVTEQVIQDIAEPHMREAQSQDKCLV 120

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQL-----KEAFNIRLEELQVLDIKFL-YGCAKPTI 177
            DP  R + +HL++G+  ++    +        K+   +RL EL +    F+      PTI
Sbjct: 121  DPAGRFLAMHLWEGVMNIMQLGTRKGANFRLDKDWAQVRLSELFMKASTFVPTETGHPTI 180

Query: 178  VVLYQ---DNKDARHVKTYEVALKDKDFVE--GPWSQNNL-----DNGADLLIPVP---- 223
              LYQ   D +DA H+  Y +       V    P     L     D  A  LIPV     
Sbjct: 181  AFLYQSSIDREDA-HLAVYRLMEDGNTNVSKFDPLKNRELELEIPDPFARTLIPVSIVES 239

Query: 224  --------------PPLCGVLIIGEETIVYC----SANAFKAIPIRPSITKAYGRVDADG 265
                            L G+++ GE  ++Y          KA+   P I  ++ + D   
Sbjct: 240  DVKRYHRRDTTNASAQLGGLIVAGETMLIYVDTLTKVKISKALD-EPRIFVSWAKYDV-- 296

Query: 266  SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
            +RYLL D  G LHLL +  +   VTGL ++ +G+TS AS + Y+ N ++++GS +GDSQL
Sbjct: 297  TRYLLADDYGNLHLLTLEVDGVIVTGLSLKTIGKTSRASCLVYMGNEILFLGSHHGDSQL 356

Query: 326  IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSGAY 374
              L+L        + +++   N+ PI+DF ++DL              GQ ++V   G +
Sbjct: 357  FTLDL----CAHTIRLIQTIPNIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAGCGVH 412

Query: 375  KDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
             +GSLR +R+ +G+ +   ++ +Q ++G++SL+S   +  DT LVVSF++ETR+   + +
Sbjct: 413  HNGSLRSIRSSVGLEDIGILDDIQDVRGLFSLKSYGSEKVDT-LVVSFLTETRVFKFDAD 471

Query: 434  DELEE-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
              +EE T  +G      TLF         +Q+T+ S  L  S S    N W SP G S+ 
Sbjct: 472  GGVEELTAFQGLTLDQPTLFAGSLANGHTLQITASSALLQDSESGVTINSWTSPNGGSIV 531

Query: 493  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLE-------YEISCLDINPIGENPS 545
             A+ N    LL+ GG  LV L +      +V+   L         +ISC     I  +  
Sbjct: 532  NASVNEKYALLSVGGSTLVSLNLTQNF--DVREQALGNGIGGDGSQISC-----IHASRD 584

Query: 546  YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII---------PRSVLLCAFE----G 592
            +  I A+G W+  SV +     +NL T + L GE I         PR +           
Sbjct: 585  FPDIGAIGFWSTGSVSV-----INLGTLQALHGESIKQNDDNVSVPRDLAFVQLHPPQLA 639

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF---SSKNTTHVFAASDR 649
               L  +L DG +++  ++     LT RK V+LG++   L       +   ++VFA ++ 
Sbjct: 640  GPTLFVSLEDGQVVSINVSKDDYSLTARKSVTLGSREAGLHVLPRPGAPGQSNVFATTEH 699

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI 709
             ++IYSS  +++YS    ++V+++ PF+S  FPD++ +A +  + I  +D  ++ H+  +
Sbjct: 700  SSLIYSSEGRIIYSAATAEDVTYIAPFDSEGFPDAIFLATDKNVRIANVDTERRTHVNPL 759

Query: 710  PLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPL-----DT 764
             +GE  RR+ +    + F I +++ +   +E  +     L D+        P       +
Sbjct: 760  HIGETVRRVAYSPALKAFGIGTIRKELLHDEEVVSSAFQLVDEIVLGKVGRPFALGGEAS 819

Query: 765  FEYGCSILSCSFSDDSNV---YYCVGTAYVL-PEENEP--TKGRILVFIVE-DGKLQLIA 817
             E   +++     D +      + +GT+Y+  P+ NE    KGRILV  V+ D    LI 
Sbjct: 820  VELVEAVIRAELDDSTGQPAERFIIGTSYLADPDVNESGDVKGRILVLGVDSDRNPYLIV 879

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 877
              E KGA   L     KL+A +++ + +Y ++     + +L+           + +   G
Sbjct: 880  SHELKGACRCLGVMGDKLVAGLSKTVVVYDYIEDSTTSGKLEKLTTFRPSTFPVDLDISG 939

Query: 878  DFIVVGDLMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            + I V DLM+S++L+ +       +  + ERAR +   W +AV  L ++ +L A+   NL
Sbjct: 940  NMIGVADLMQSMTLVEFLPAKDGRKAKLIERARHFEYIWATAVCSLGEESWLEADAQGNL 999

Query: 934  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
              + +  +  T+ ++ ++    E HLGE VN+ R   L +   ++D+  +P     TV+G
Sbjct: 1000 MILERQPDAPTEHDQKQMRTTSEMHLGEQVNKIR--PLQITATENDI-IVPKAFLATVDG 1056

Query: 994  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVG--------GLNHEQWRSFNNEKKTVDAK- 1044
             + V+A++  E    L   Q  L  +++ +G        G +  QWR F N K+   A  
Sbjct: 1057 SLYVLANISAEYQSILLPFQERLAGIVRYLGQAAPEDNEGPSFSQWRGFRNAKRMAAAPF 1116

Query: 1045 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
             F+DG+LIE FLDL   R + + + +  SVE +   VEEL R+H
Sbjct: 1117 RFVDGELIERFLDLDELRQEAVVEGLGPSVEAMRNMVEELRRMH 1160


>gi|400600376|gb|EJP68050.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
          Length = 1174

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 321/1185 (27%), Positives = 573/1185 (48%), Gaps = 115/1185 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIA----KCTRIEIHLLTPQGLQPMLDVPIYGR 61
            Y+   H PT++ H+    F SP   +LI+A    K  R+EI  +T +G+  +    ++G 
Sbjct: 3    YIAPVHLPTSIRHAVRLQFRSPDHEDLIVAVPISKANRLEIWRVTQEGMTCLHTKVVHGT 62

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELI--TRAMGDVSDRIGRPTDNGQ 119
            I  L+  RP     D LF+ TER ++  + W+ +S+E++     + D+++   R + +  
Sbjct: 63   ICMLQRLRPRDATTDLLFVGTERLQYFNVSWNPKSNEMVLTNETIHDMAEPYMRESQSQN 122

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPFDN----KGQLKEAFNIRLEELQVLDIKFLYG-CAK 174
              ++DP  + + +HL++G+  +    N      +LK+   IRL EL + D  F++     
Sbjct: 123  KCLVDPTAKYMVMHLWEGVLNIFRLPNTPRASKKLKKMEQIRLTELWMKDSAFIHSRTGH 182

Query: 175  PTIVVLYQ---DNKDARHVKTYEVALKDK--DFVE-GPWSQNNLDN-----GADLLIPVP 223
            P I  LY+   D ++AR V  Y +   DK  D  +  P     LD       A +LIPVP
Sbjct: 183  PRIAFLYKTQLDQEEAR-VAVYRLTTDDKGTDVSKFDPHKDRELDQVIADPYASMLIPVP 241

Query: 224  ----------------PPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDAD 264
                              L G+L++GE  + Y  +  + ++      P I  A+   D  
Sbjct: 242  VAEEKRYHVRNTEGTRAHLGGLLVVGETLLTYFDSLTYSSVSSALDEPKIYVAWAMYD-- 299

Query: 265  GSRYLLGDHAGLLHLLVI-THEKEK---VTGLKIELLGET------SIASTISYLDNAVV 314
             + Y L D  G L L+ + T+ + K   VTG+ +E L  +      S AS + Y+ + ++
Sbjct: 300  DTHYFLADDYGRLDLMTLKTYTEPKGVIVTGMTVEPLKISDSRELISRASNLVYMGDGML 359

Query: 315  YIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------ 362
            ++ S +G+SQL++++L  D++  Y+  ++   N GPI+DF ++D+  +            
Sbjct: 360  FLASHHGNSQLLRIDL--DSRTLYI--IKSLSNNGPILDFAIMDMGNRDGDNHQGNVFSS 415

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSF 421
            GQ ++V   GAY+DGSLR +R+G+G+ +   + EL+  +G++ ++S      D  LV SF
Sbjct: 416  GQTRIVAGCGAYRDGSLRSIRSGVGLEDCVILDELENTRGLFMIKSRGSRLVDV-LVASF 474

Query: 422  ISETRILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            ++ETRI  M LEDE+EE  +  G   + +TL         L+QVT   V +     R   
Sbjct: 475  VTETRIFLM-LEDEVEELYDWCGLNLEVETLIAATLPGYDLLQVTRTDVAIFHFDDRPEI 533

Query: 481  NEWKSPPGY------SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
            + W     +       +  A+ N   VLL   G  +V L I   +   V+  Q       
Sbjct: 534  DSWVKTKSWVNESEGEITSASYNDKWVLLCIDGTTIVSLNIEKNLEACVQRYQGTDPSQS 593

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF 590
              ++ +  +P       VG W    + I  L  LN    E+L   +    +PR + L   
Sbjct: 594  DQVSCLHASPDVMDFGVVGWWNSGKITIVDLATLNAKHGENLQQTMDAASVPRDIALVQL 653

Query: 591  E--GIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF-----SSKNTT 641
                IS   LL AL DG + +F ++++  EL+ +K V+LG+ P  L        +S  T+
Sbjct: 654  HPPDISGPTLLVALEDGTVTSFDVSVENLELSGKKTVTLGSSPARLHILPEPDDTSDGTS 713

Query: 642  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 701
             +FA ++  ++IYSS  +L+YS       + + PF+S  FP  + ++ +  + I  +D  
Sbjct: 714  SIFATTEHSSLIYSSEGRLVYSATTADNATCVVPFDSYGFPHCILVSTDKNVRICRVDKE 773

Query: 702  QKLHIRSIPLGEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFIST- 759
            +  H++S+P+ E  RR+ +   ++ FA+ C  K+     E     V+L+D+  F+ + T 
Sbjct: 774  RLTHVKSLPVHETVRRVAYAPGAKAFALGCIKKDLIQNAEVITSSVKLVDEIMFQELGTP 833

Query: 760  YPL---DTFEYGCSILSCSFSDDSNVY---YCVGTAYV----LPEENEPTKGRILVFIVE 809
             PL    T E   S++     D +      + VGT++V    + E  E T+GRILV  V+
Sbjct: 834  LPLAASSTLEMVESVIRAELPDPTGALVERFVVGTSFVNDAEVGEAGE-TRGRILVLGVD 892

Query: 810  DGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 868
            + + L  I     KGA   L   +  ++A + + + +Y +   +     LQ    +    
Sbjct: 893  EKRQLYTIVSHNLKGACRCLGILDEYIVACLAKTVVVYSYTEENSTEGYLQKLAAYRPAS 952

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIY 924
              + +   G+ I V D+M+S+SL+ +      E G +EE+AR + + W ++V  L  + +
Sbjct: 953  FPVALDISGNMIGVADIMQSLSLVEFTPPKDGEPGKLEEKARHFQSAWATSVCHLGGERW 1012

Query: 925  LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
            L  +   N+  + +N +  T+ +R RLE+  E +LGE +N+ +  ++    P  +V   P
Sbjct: 1013 LETDAQGNIIVLARNPDAPTEHDRSRLEITSEMNLGEQINKIQRLNVA---PADNVVVSP 1069

Query: 985  TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 1044
                 ++ G + +   +  +    L  LQT + K +K  GG++ + WR+F N+ +  D  
Sbjct: 1070 KAFLASIEGTLYLYGDIAPKYQDLLITLQTTIEKYVKTTGGISFDAWRAFRNQAREADGP 1129

Query: 1045 -NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
              F+DG+++E FLDL +     + + + ++VE++   +EEL R+H
Sbjct: 1130 FRFVDGEMVERFLDLRKQTQAALCQDLGLNVEDVRNMIEELRRMH 1174


>gi|302655264|ref|XP_003019424.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
 gi|291183145|gb|EFE38779.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
          Length = 1027

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 309/1045 (29%), Positives = 509/1045 (48%), Gaps = 103/1045 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVV  H  +++ H+    F SP E  L++AK  R+E++  +  GL       IYGR+  L
Sbjct: 3    YVVPIHGASSIRHALRAKFISPDEDCLVVAKANRLELYTQSADGLVLQHSKAIYGRVTLL 62

Query: 66   ELFRPHGEA-----QDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQ 119
            +   P   A      D LF+ T++Y +  + WD    +L T R   D++D   R   +  
Sbjct: 63   KKL-PRSTAGGLALTDALFVGTDQYAYFSITWDPVHEQLRTERKYIDLADGSLREAHSDD 121

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPFDNKG---------------------QLKEAFNIRL 158
               IDP    + L +Y+G+  + P                          QL E   +R+
Sbjct: 122  RCQIDPSGSFLTLEVYEGVVSIFPLVTADSHKRAKSAVSASASSASTSVEQLGEPLQVRI 181

Query: 159  EELQVLDIKFLYGCAK--PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNL---- 212
            EEL V    FL   A   P   +LY+D +    +K  ++          P S   L    
Sbjct: 182  EELMVRSSAFLDQEASNTPRFALLYEDTQGKVKLKLRDLKYTHAIITGDPGSAAELKDVT 241

Query: 213  ------DNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVD 262
                  D GA +LIPVP PL G+LIIGE +I Y   +  + I  RP    ++  A+ +VD
Sbjct: 242  TLSDEVDLGASILIPVPRPLGGLLIIGESSIKYVDVSRNETIS-RPLAESTVFVAWEQVD 300

Query: 263  ADGSRYLLGDHAGLLHLLVITHEKEK-VTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
              G R+LL D  G L  L++  + E  V   K++ LG TS AS + YLD  +V++GS  G
Sbjct: 301  --GQRWLLADDYGRLFFLMLVLDAENAVDTWKVDFLGVTSRASVLVYLDGGIVFVGSHQG 358

Query: 322  DSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSG 372
            DSQ+I++      +G + ++++   N+ PI+DF V+D+  +         GQ ++VT SG
Sbjct: 359  DSQVIQIK-----EGGF-DLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGSG 412

Query: 373  AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            A+ DGSLR VR+G+GI E   +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   +
Sbjct: 413  AFGDGSLRSVRSGVGIEELGVLASMEHITDLWTLRSACPEPFLDTLLVSFVNETRVFHFS 472

Query: 432  LEDELEETE--IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PG 488
             + ++EE E    G      TL   +   N+++QVT  + R +   S  +   W+S    
Sbjct: 473  ADGDVEEKEDGFLGLVFSQSTLLATNIPGNRIIQVTESTSRAIDVDSGMII--WRSSYEE 530

Query: 489  YSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQ 548
            +++  A+AN   ++L  GG  LV + +    L   +  + + ++S + I       S +Q
Sbjct: 531  FTITSASANDDYLVLVLGGIRLVCMSLSTFELVGSRDFEADNQVSGMTIPA-----SPTQ 585

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGH 604
               V +     + I  LP+L +  K+ LG  GE IPRSV++          L  ++ DG 
Sbjct: 586  ACIVCLPQSAEIIILDLPELEVKNKQALGEPGEAIPRSVIVAEILPNKPPTLFVSMADGT 645

Query: 605  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYS 663
            + +F  ++    L +  K++LG++  + +     N  + VFA  D P++I++S  +++YS
Sbjct: 646  VFSFSFDVHAFSLFNSSKITLGSEQPSFKELPRGNGQYNVFATCDHPSLIHASEGRIVYS 705

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
             V+    S +C  N+ A+P S+A++ + EL I  +D+ +   I ++P+    RR+ +   
Sbjct: 706  AVDSASASRICSLNTQAYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRRLAYSPM 765

Query: 724  SRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPL-----------DTFEYGCS 770
             + F + ++K +  +  EE    FV L D+  F  +STY L               YG  
Sbjct: 766  EKAFGLGTVKRKISNGVEEVSSSFV-LADEMLFRPLSTYDLRPDELVECVIRSQLNYGKD 824

Query: 771  ILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLN 829
             +  S S D    + VGTA++    ++  +GRIL+F V   + L LI EK   GA  +L 
Sbjct: 825  EVGNSISKD---LFFVGTAFLDDVGDDHIRGRILIFEVNRSRELSLIVEKSLMGACRTLA 881

Query: 830  AFNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
              +  LL A + + + ++K      G   L+    +      + +   GD + V D+MKS
Sbjct: 882  VMDHTLLVAGLVKSVSVFKLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKS 941

Query: 889  ISLLIYKH-EEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 943
            +SL+ Y   EEG      EE AR Y   W +AV  +++++YL A+   NL  +++N  G 
Sbjct: 942  MSLVQYTQPEEGEQEPKFEEVARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGV 1001

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRH 968
            T+ +R RL+   E  LGE +    H
Sbjct: 1002 TESDRKRLQPTSEIRLGEMLFLHEH 1026


>gi|393212467|gb|EJC97967.1| hypothetical protein FOMMEDRAFT_162310 [Fomitiporia mediterranea
            MF3/22]
          Length = 1161

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 322/1137 (28%), Positives = 544/1137 (47%), Gaps = 104/1137 (9%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELN-LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            V T H+PT+V  S     T  ++   L++AK + +E+  + P  L+    + I+GRI +L
Sbjct: 4    VATFHQPTSVVGSIKTTLTEDEDTEYLVVAKSSILEVFAILPDALRLQCVLEIWGRITSL 63

Query: 66   ELFRPHGE-AQDFLFIATERY--KFCVLQW----DAESSELITRAMGDVSDRIGRPTDNG 118
            +      E +Q  L + T+    K  +L++          L T     + +R  RPT+  
Sbjct: 64   QAVPTDDENSQHHLLVLTDHPDPKLFLLEYVQSNAGSGPSLKTLKTVSLHERNARPTEYV 123

Query: 119  QIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC-AKPT- 176
               ++D   ++     Y G  +V+  + KG +   F+  + EL ++ + FL    A+ T 
Sbjct: 124  SKCLVDHKGKVAVACSYTGKLRVLELE-KGLINSEFDTAVRELNIVSLCFLRTTNARATA 182

Query: 177  IVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQ----NNLDNGADLLIPVPPPL------ 226
            + +LY+D      V +++++L D +    P S     +  D  ++LLIPVPP +      
Sbjct: 183  LAILYKDYMQKLSVTSHDLSLADLELSPSPSSFLPEFHVPDEDSNLLIPVPPQIKSSWNV 242

Query: 227  -CGVLIIGEETIVYCSAN--------------AFKAIPIRP------SITKAYGRVDADG 265
              GVL++G  TI + S +              +   IP          IT A+ ++D DG
Sbjct: 243  NGGVLVLGGSTIAFYSIDRKQKKKNSSSQSKSSTSKIPQAEVNWPYFDIT-AWAQIDEDG 301

Query: 266  SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
             RYLLGD  G L LL I     +   L I LLGE S  ++++ L +  +Y+GS +GDSQL
Sbjct: 302  LRYLLGDSFGRLALLAI---NPQYAYLDIVLLGEVSPPTSLTPLASQYIYVGSHFGDSQL 358

Query: 326  IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNG 385
            I++  +  + GSY+E+ + + N+ PI+D    D +  GQ  ++TCSG    GSLR++RNG
Sbjct: 359  IRVTSERSSNGSYLEISDTFKNIAPIMDAVFEDTDDSGQPTIITCSGGESTGSLRVIRNG 418

Query: 386  IGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM-NLEDELEETEIEG 443
               NE A +E +  I GMW +R   DD F  +++V+  + T +L + N + E   +    
Sbjct: 419  ANFNEDARIEGIANITGMWPIRRQYDDTFHHYMLVTTDTNTHLLELPNSQQETAVSRSND 478

Query: 444  FCSQT---QTLFCHDAIYNQLVQ--------------VTSGSVRLVSSTSRELRNEWKSP 486
            F   T   +TL   + +   + +              V+  SV L+++ +    ++W   
Sbjct: 479  FSDLTIDSRTLVAGNMLTRLMSESGKSEYVSSSYVVQVSRDSVILLNTRTGLREDQWSPG 538

Query: 487  PGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL------EYEISCLDINPI 540
            PG  + +A  + SQ+ +A  GG +V L +    + E    Q         EIS L I+P+
Sbjct: 539  PGNKIVLADISPSQICVAISGGTVVLLNLFADKINEQSRKQFYSPDGSSSEISALSISPM 598

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAF-----EGISY 595
                ++S   A+G W+   V++  LP    I    +    +PRS+LLC F     +   Y
Sbjct: 599  KRGANFSSFVALGFWSSHEVKVLRLPTFEQIDAVPVVMPHLPRSLLLCDFSEEESKPHRY 658

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            L+  L +G +++     K G L ++K   LG  P++L      +   VFA+  R  + Y 
Sbjct: 659  LMVGLANGTVVSMPFAEK-GVLGEKKFFGLGGAPVSLSRCEVNDKPAVFASGARSALFYR 717

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EH 714
            S   L +S V +K+V+     +S +F  S+A++    L +G + ++ KLHIR++ +G E+
Sbjct: 718  SKDTLSHSPVLIKDVTFASAIHSESFTSSMALSTLDGLVVGRVLELDKLHIRTVFMGKEN 777

Query: 715  PRRICHQEQSRTFAICSLK------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYG 768
            P ++ +   ++   +  LK        +    S    V  +D +T   IS  P +     
Sbjct: 778  PTKLAYHSAAKLLGVGCLKLDRSTFKGAPVAASSFKLVDTVDFRTTHEISLEPNEEITAV 837

Query: 769  CSI-LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ---LIAEKETKGA 824
              + L C    D+  ++ VG+ Y    E EP++GRIL+      + Q   ++A  E KGA
Sbjct: 838  ALVSLDCGIGWDT--FFAVGSVYFDETEREPSRGRILIISTGSKRNQTPHILASTEVKGA 895

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 884
            V +L    GKL+ AIN  + +++    D+      +   H+  ++   V    D IV+GD
Sbjct: 896  VNALTCIQGKLVVAINTSVDVFRLKHGDNTVLTAVTSWNHNYLVITAVVM--DDLIVIGD 953

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
             + S+++L  K E+  +   ARDY+  W   +   D+   +GA N+ NLF+ R   +G+ 
Sbjct: 954  AVSSLAVL--KLEDDKLTTFARDYSPLWPLCIGAFDNKTVIGANNDNNLFSYRLQKQGS- 1010

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
               +  L+  G Y++ E VN+   G      P+    Q   ++F T  G I V+ ++  +
Sbjct: 1011 ---KMLLDQDGLYNIEEIVNKCVPGCF-DSTPNKFGLQTKQLLF-TSTGRIAVVVNVEDD 1065

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK----NFLDGDLIESFLD 1057
                L  L+ N+  VIKG G L+H  WR+ +N +   DA      FLDGDL+E FLD
Sbjct: 1066 LSRLLSSLERNMAGVIKGPGDLDHTLWRAPSNSRGRSDANGAATGFLDGDLLERFLD 1122


>gi|346321204|gb|EGX90804.1| DNA damage-binding protein 1 [Cordyceps militaris CM01]
          Length = 1160

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 310/1177 (26%), Positives = 561/1177 (47%), Gaps = 113/1177 (9%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+   H PT++ H+    F+SP   +LI+AK  R+EI  +T + +  +    ++G I  L
Sbjct: 3    YIAPVHLPTSIRHAIRLQFSSPDHEDLIVAKANRLEIWRVTREDMTCLHTKVVHGTICML 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESS--ELITRAMGDVSDRIGRPTDNGQIGII 123
            +  RP     D LF+ TER ++  + W+++ +  EL    + D ++   R + +    ++
Sbjct: 63   QRLRPKDANTDLLFVGTERLQYFNVSWNSQRNEMELTHETIHDTAEPYMRESQSQNKCLV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNK----GQLKEAFNIRLEELQVLDIKFLYG-CAKPTIV 178
            DP  + + +HL++G+  V     +     +L+E   IRL EL + D  F++     P I 
Sbjct: 123  DPTAKYMVMHLWEGVLNVFRLPARRGVSDKLEEMDQIRLTELWMKDSAFIHSRTGHPRIA 182

Query: 179  VLYQ---DNKDARHVKTYEVALKDK--DFVE-GPWSQNNLDN-----GADLLIPVP---- 223
             LY+   D ++AR V  Y +   DK  D  +  P     LD       A +LIPVP    
Sbjct: 183  FLYKTQLDEEEAR-VAVYRLTKDDKGSDVSKFDPHKDRELDQVIADPCASMLIPVPVAEE 241

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDADGSRY 268
                          L G+L++GE  + Y  +  + ++      P I  A+   D   + Y
Sbjct: 242  KRYHVRNNEGTRAHLGGLLVVGETLLTYFDSLTYSSVSSVLDEPKIYVAWAMYDE--THY 299

Query: 269  LLGDHAGLLHLLVI-THEKEK---VTGLKIELL------GETSIASTISYLDNAVVYIGS 318
             L D  G L LL + TH ++    V  + +E L        TS AS++ Y+   ++ + S
Sbjct: 300  FLADDYGRLDLLTLQTHSEQTGVVVNRMTVEPLKFPDSKNLTSRASSLVYMGGGMLVVAS 359

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
             +GDSQL    LQ D     +  ++   N GPI+DF ++D+  +            GQ +
Sbjct: 360  HHGDSQL----LQIDIDSRTMHPIKLLSNNGPILDFAIMDMGNRDGDNLQGNLFSSGQAR 415

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
            +V   GAY+DGSLR +R+G+G+ +   + E++  + +++++S      DT LV  +I +T
Sbjct: 416  IVAGCGAYRDGSLRSIRSGVGLEDLGILEEIKNTRRLFTIKSRRSKKVDT-LVACYILDT 474

Query: 426  RILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
            R+     + +++E     G   + ++L   +    +L+QVT   V +     +     W 
Sbjct: 475  RVFLFGADGDIQEVNNFPGLNLRVESLLVVNLPNGRLLQVTRMDVTIKDPNEQAKALRWV 534

Query: 485  SPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ------LEYEISCLDIN 538
            + PG ++  A+ N   +LL   G  +V L I   +   V+  Q         ++SCL   
Sbjct: 535  A-PGANITSASCNGKWILLCVDGSKIVSLNIDKNLEACVQQYQGADDSNQSNQVSCLH-- 591

Query: 539  PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFE--- 591
                + ++     +G W    + I  L  L+    E L        +PR + L       
Sbjct: 592  ---ASTTFQDYGVIGWWYPGRITIIDLATLSAKHVETLQQTTDAASVPRDISLVQLHPRH 648

Query: 592  -GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF-SSKNTTHVFAASDR 649
                 LL AL DG ++ F ++ +   L+ +K+V+LG+ P  L     +  T+ +FA ++ 
Sbjct: 649  ASGPTLLVALEDGTVITFNVS-EDLTLSGKKRVTLGSSPACLHVLPEADGTSKIFATTEN 707

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI 709
             ++IYSS  +++YS     + + + PF+S AFP+S+ ++ +  + +  ID  +  H++S+
Sbjct: 708  ASLIYSSEGRIIYSATTADDATCVVPFDSEAFPNSILLSTDKHVRLCHIDKERLTHVKSL 767

Query: 710  PLGEHPRRICHQEQSRTFAICSLKNQSCA-EESEMHFVRLLDDQTFEFISTYPL-----D 763
            P+ E  RR+ +    + FA+  +K +    EE     V+L+D+  F+ +   PL      
Sbjct: 768  PVYETVRRVAYAPGVKAFALGCIKKELIRNEEVITSSVKLVDEIIFQELGA-PLQLNASS 826

Query: 764  TFEYGCSILSCSFSDDSNVY---YCVGTAYVLPE---ENEPTKGRILVFIV-EDGKLQLI 816
            T E   S++     D +      + VGT+++      E   T+GRILV  V E+ +L  I
Sbjct: 827  TLEMVESVIRAELPDHTGALVERFIVGTSFITDADVGEASETRGRILVLGVDEERQLYTI 886

Query: 817  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 876
                 KGA   L+  +  ++A +++ + +Y++         LQ    +      + +   
Sbjct: 887  VTHNLKGACRCLSVLDEYIVAGLSKTVVVYRYTEETSTEGSLQKLAAYRPASFPVALDVS 946

Query: 877  GDFIVVGDLMKSISLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            G+ I VGDLM+S+SL+ +      E   ++E+AR + + W ++V  LD + +L  +   N
Sbjct: 947  GNMIGVGDLMQSLSLVEFTPPKDGEPAKLQEKARHFQSAWATSVCHLDGERWLETDAQGN 1006

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
            +  + +N E  T+++RGRLE+  E +LGE +N+ R  ++    P  +    P     ++ 
Sbjct: 1007 IMVLARNPEAPTEQDRGRLEITSEMNLGEQINKIRKLNVA---PADNAVVSPKAFLASIE 1063

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDL 1051
            G + +   +  +    L  LQ+N+ + +K  G ++   WRSF N+ +  D    F+DG++
Sbjct: 1064 GTLYLYGDIAPKYQDLLITLQSNIEQYVKTTGDISFNAWRSFRNQTREADGPFRFVDGEM 1123

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +E FLDL      E+ K +  SVE++   +EEL R+H
Sbjct: 1124 VERFLDLDELTQVELCKDLGPSVEDVRNMIEELRRMH 1160


>gi|440487047|gb|ELQ66855.1| DNA damage-binding protein 1a [Magnaporthe oryzae P131]
          Length = 1213

 Score =  395 bits (1014), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 335/1195 (28%), Positives = 555/1195 (46%), Gaps = 126/1195 (10%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
            Y+   H+ ++V H+      + +E +L++AK  R+EI   T +G L+      ++G+I  
Sbjct: 33   YIAPIHRSSSVRHALYIQLLAGEEPSLVLAKTNRLEIWRRTDEGQLKLEHSQSVFGKIVM 92

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITR-AMGDVSDRIGRPTDNGQIGII 123
            L+  RP     D LF+ T+R+K+   ++D ++ EL+TR A+ D+ ++  R   +    I+
Sbjct: 93   LQAVRPKDSETDMLFVGTDRFKYFTAEYDPDTRELVTRQAISDLGEQFVREVSSRNRCIV 152

Query: 124  DPDCRLIGLHLYDGLFKVIPF-DNKGQLKEAFNIRLE--------ELQVLDIKFLYG-CA 173
            DP  R + L L+ G+  V      KGQ K     RLE        EL + D  FL+   A
Sbjct: 153  DPSGRYMVLLLWSGIMHVWRLHKRKGQQKGQLQTRLELMDQARISELYIKDAVFLHSETA 212

Query: 174  KPTIVVLYQDNKDARHVK--TYEVALKDKDFVEGPWSQ-------NNLDNGADLLIPVP- 223
             P I  LYQ   +    K  +Y +   D+D     + Q       N  D G+ ++IPV  
Sbjct: 213  HPRIAFLYQPRPNEPDCKFASYRLCTDDRDRELSRFEQKDREFTFNVPDPGSTMMIPVER 272

Query: 224  -----------PP-----LCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDAD 264
                       P      L GV+++GE  ++Y    ++           +  A+ + D  
Sbjct: 273  VETERRHNFRNPARDECHLGGVIVVGESRMLYIDDQSWTWTETALKNAMVFVAWAKFD-- 330

Query: 265  GSRYLLGDHAGLLHLLVITHEKEKVTG---LKIELLGETSIASTISYLD-NAVVYIGSSY 320
             + YLL D  G LHLL I  ++   T    +    +G TS A+ + Y + N  +++ S Y
Sbjct: 331  NTHYLLADDYGGLHLLTIQVKQNSDTAVDHMSTVQIGTTSRATKLVYSETNRTLFVASHY 390

Query: 321  GDSQLIKLNLQPDA-KG-SYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
            GDSQ   +NL  DA KG S++E+ +   N+ PI+DF V+D+  +            GQ +
Sbjct: 391  GDSQFYDVNLFADAAKGESFLELRQTIENIAPILDFAVMDMGNREGDSQLGNEYSSGQAR 450

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV--ELQGIKGMWSLRSSTDDPFDTFLVVSFISE 424
            +VT SGA KDGSLR VR+G+G+ +   +  E+ G+ G++SL+S   D  DT LVVSF++E
Sbjct: 451  IVTASGAQKDGSLRSVRSGVGLEDIGVITDEISGVTGLFSLKSYGSDVEDT-LVVSFLTE 509

Query: 425  TRILAMNLEDELEE-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
            TR+   + + E+EE ++++G      TL         ++ VT     L  +      + W
Sbjct: 510  TRVFRFDKQGEVEELSQLQGLDISQPTLLVLGLDNGHVLYVTEEKATLFDAEGGVTISSW 569

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGE 542
                G  +  A++N   VLL+  G  LV L IG D  ++     + E +ISC     +  
Sbjct: 570  SPTSGKPITHASSNGRWVLLSVDGRKLVSLNIGLDLKVSAESEERDEDQISC-----VNA 624

Query: 543  NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC----AFEGIS 594
            +P    + AVG W+  ++ I  L  L     E L       ++ R V+L     A     
Sbjct: 625  SPHLLDVGAVGFWSSGTISIIDLKTLEATQTEKLRRNEDDAVVAREVVLARVLPAEVANP 684

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVI 653
             L  +  DG ++ F+ N   G L+ RK V LGT+    R     N    +F   +  ++I
Sbjct: 685  TLFVSKDDGEVMTFVYN-DNGTLSSRKSVVLGTREARFRVLPQPNGLCSIFVTCEHSSLI 743

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG------ELTIGTIDDIQKLHIR 707
            + + ++++YS V     +++CPF++AAF D LA+A E       EL I  ID  ++  + 
Sbjct: 744  HGAERRIVYSAVTAHSAAYVCPFDTAAFRDCLAVATESAIDRRMELKISRIDRQRQCQMM 803

Query: 708  SIPLGEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTF 765
            + P+GE+ R I +    + F + C  +  S   E      +L D+  FE   + + L+  
Sbjct: 804  TRPMGENVRSIAYSSADKVFGLGCIRRVLSRGIEKVYGTFKLFDEVIFEPKGNVFALEDG 863

Query: 766  EYGCSILSCSFSD---DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ-LIAEKET 821
            E    +      D   +    + VGT Y L        GR+LVF V++ +   LI    T
Sbjct: 864  EVPECVTRAPLLDSYGEQAERFIVGTRY-LSGTGSGHGGRVLVFGVDESRSPYLIHAHST 922

Query: 822  KGAVYSLNAFNGKLLA-AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 880
            K     +   +  LL  A+ + + L ++      + +            A+ V   G  I
Sbjct: 923  KSGCRRIATMDDDLLVIALTKTVVLVRYSETSTTSAKFLKVAAFQTSSYAVDVTVHGKLI 982

Query: 881  VVGDLMKSISLLIY--------------------KHEEGAIE----ERARDYNANWMSAV 916
             V D+MKSI+LL Y                    K  EG+ +    E  RDY A W +AV
Sbjct: 983  AVADIMKSITLLEYIPGVGKSAKTGGKDKATRSDKEVEGSKQAKLVEVCRDYQAMWSTAV 1042

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 976
              L+ D ++ A+ + NL  + +N+ G T E++ R+++  E+ LGE VN+ +    VM   
Sbjct: 1043 SHLEGDSWIVADGDGNLVVLLRNTAGVTLEDKRRMQMTSEFGLGECVNKIQK---VMVET 1099

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK-VIKGVGGLNHEQWRSF 1034
             ++   +      T  G I +  ++ P  Q L ++  Q N+   V   +G L   QWRSF
Sbjct: 1100 SANAPIVAKAFLSTTEGSIYLFGTVAPKFQSLLMD-FQANMEAHVSSPLGELQFNQWRSF 1158

Query: 1035 NN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
             N E++    + FLDG+ +E FLD+      +I + ++ + E++   + E+  +H
Sbjct: 1159 RNPEREGAGPERFLDGEFLEMFLDMEENTQIDICQGLSYTAEDMRNLIGEMKNMH 1213


>gi|389629928|ref|XP_003712617.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
 gi|351644949|gb|EHA52810.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
 gi|440464739|gb|ELQ34110.1| DNA damage-binding protein 1a [Magnaporthe oryzae Y34]
          Length = 1183

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 335/1195 (28%), Positives = 555/1195 (46%), Gaps = 126/1195 (10%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
            Y+   H+ ++V H+      + +E +L++AK  R+EI   T +G L+      ++G+I  
Sbjct: 3    YIAPIHRSSSVRHALYIQLLAGEEPSLVLAKTNRLEIWRRTDEGQLKLEHSQSVFGKIVM 62

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITR-AMGDVSDRIGRPTDNGQIGII 123
            L+  RP     D LF+ T+R+K+   ++D ++ EL+TR A+ D+ ++  R   +    I+
Sbjct: 63   LQAVRPKDSETDMLFVGTDRFKYFTAEYDPDTRELVTRQAISDLGEQFVREVSSRNRCIV 122

Query: 124  DPDCRLIGLHLYDGLFKVIPF-DNKGQLKEAFNIRLE--------ELQVLDIKFLYG-CA 173
            DP  R + L L+ G+  V      KGQ K     RLE        EL + D  FL+   A
Sbjct: 123  DPSGRYMVLLLWSGIMHVWRLHKRKGQQKGQLQTRLELMDQARISELYIKDAVFLHSETA 182

Query: 174  KPTIVVLYQDNKDARHVK--TYEVALKDKDFVEGPWSQ-------NNLDNGADLLIPVP- 223
             P I  LYQ   +    K  +Y +   D+D     + Q       N  D G+ ++IPV  
Sbjct: 183  HPRIAFLYQPRPNEPDCKFASYRLCTDDRDRELSRFEQKDREFTFNVPDPGSTMMIPVER 242

Query: 224  -----------PP-----LCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYGRVDAD 264
                       P      L GV+++GE  ++Y    ++           +  A+ + D  
Sbjct: 243  VETERRHNFRNPARDECHLGGVIVVGESRMLYIDDQSWTWTETALKNAMVFVAWAKFD-- 300

Query: 265  GSRYLLGDHAGLLHLLVITHEKEKVTG---LKIELLGETSIASTISYLD-NAVVYIGSSY 320
             + YLL D  G LHLL I  ++   T    +    +G TS A+ + Y + N  +++ S Y
Sbjct: 301  NTHYLLADDYGGLHLLTIQVKQNSDTAVDHMSTVQIGTTSRATKLVYSETNRTLFVASHY 360

Query: 321  GDSQLIKLNLQPDA-KG-SYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
            GDSQ   +NL  DA KG S++E+ +   N+ PI+DF V+D+  +            GQ +
Sbjct: 361  GDSQFYDVNLFADAAKGESFLELRQTIENIAPILDFAVMDMGNREGDSQLGNEYSSGQAR 420

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV--ELQGIKGMWSLRSSTDDPFDTFLVVSFISE 424
            +VT SGA KDGSLR VR+G+G+ +   +  E+ G+ G++SL+S   D  DT LVVSF++E
Sbjct: 421  IVTASGAQKDGSLRSVRSGVGLEDIGVITDEISGVTGLFSLKSYGSDVEDT-LVVSFLTE 479

Query: 425  TRILAMNLEDELEE-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
            TR+   + + E+EE ++++G      TL         ++ VT     L  +      + W
Sbjct: 480  TRVFRFDKQGEVEELSQLQGLDISQPTLLVLGLDNGHVLYVTEEKATLFDAEGGVTISSW 539

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGE 542
                G  +  A++N   VLL+  G  LV L IG D  ++     + E +ISC     +  
Sbjct: 540  SPTSGKPITHASSNGRWVLLSVDGRKLVSLNIGLDLKVSAESEERDEDQISC-----VNA 594

Query: 543  NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC----AFEGIS 594
            +P    + AVG W+  ++ I  L  L     E L       ++ R V+L     A     
Sbjct: 595  SPHLLDVGAVGFWSSGTISIIDLKTLEATQTEKLRRNEDDAVVAREVVLARVLPAEVANP 654

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVI 653
             L  +  DG ++ F+ N   G L+ RK V LGT+    R     N    +F   +  ++I
Sbjct: 655  TLFVSKDDGEVMTFVYN-DNGTLSSRKSVVLGTREARFRVLPQPNGLCSIFVTCEHSSLI 713

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG------ELTIGTIDDIQKLHIR 707
            + + ++++YS V     +++CPF++AAF D LA+A E       EL I  ID  ++  + 
Sbjct: 714  HGAERRIVYSAVTAHSAAYVCPFDTAAFRDCLAVATESAIDRRMELKISRIDRQRQCQMM 773

Query: 708  SIPLGEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTF 765
            + P+GE+ R I +    + F + C  +  S   E      +L D+  FE   + + L+  
Sbjct: 774  TRPMGENVRSIAYSSADKVFGLGCIRRVLSRGIEKVYGTFKLFDEVIFEPKGNVFALEDG 833

Query: 766  EYGCSILSCSFSD---DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ-LIAEKET 821
            E    +      D   +    + VGT Y L        GR+LVF V++ +   LI    T
Sbjct: 834  EVPECVTRAPLLDSYGEQAERFIVGTRY-LSGTGSGHGGRVLVFGVDESRSPYLIHAHST 892

Query: 822  KGAVYSLNAFNGKLLA-AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 880
            K     +   +  LL  A+ + + L ++      + +            A+ V   G  I
Sbjct: 893  KSGCRRIATMDDDLLVIALTKTVVLVRYSETSTTSAKFLKVAAFQTSSYAVDVTVHGKLI 952

Query: 881  VVGDLMKSISLLIY--------------------KHEEGAIE----ERARDYNANWMSAV 916
             V D+MKSI+LL Y                    K  EG+ +    E  RDY A W +AV
Sbjct: 953  AVADIMKSITLLEYIPGVGKSAKTGGKDKATRSDKEVEGSKQAKLVEVCRDYQAMWSTAV 1012

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 976
              L+ D ++ A+ + NL  + +N+ G T E++ R+++  E+ LGE VN+ +    VM   
Sbjct: 1013 SHLEGDSWIVADGDGNLVVLLRNTAGVTLEDKRRMQMTSEFGLGECVNKIQK---VMVET 1069

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK-VIKGVGGLNHEQWRSF 1034
             ++   +      T  G I +  ++ P  Q L ++  Q N+   V   +G L   QWRSF
Sbjct: 1070 SANAPIVAKAFLSTTEGSIYLFGTVAPKFQSLLMD-FQANMEAHVSSPLGELQFNQWRSF 1128

Query: 1035 NN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
             N E++    + FLDG+ +E FLD+      +I + ++ + E++   + E+  +H
Sbjct: 1129 RNPEREGAGPERFLDGEFLEMFLDMEENTQIDICQGLSYTAEDMRNLIGEMKNMH 1183


>gi|402223178|gb|EJU03243.1| hypothetical protein DACRYDRAFT_115454 [Dacryopinax sp. DJM-731 SS1]
          Length = 1175

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 342/1194 (28%), Positives = 563/1194 (47%), Gaps = 132/1194 (11%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YVVT H+PT    S  G+FT    + L++AK  R+E++ L+P+GL+ + D+ I+G I  +
Sbjct: 3    YVVTHHQPTAAVDSIRGDFTGSGSVQLVVAKVNRVELYNLSPEGLKRVCDLEIWGTITNI 62

Query: 66   ELFRPHGEAQDFLFIATER---YKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
               +   + Q  + + T+    Y   +      + +        +  R GR  +  Q  I
Sbjct: 63   AEVK-REDKQSHILVTTDHPDPYLLSLAYSPTPNPQFEVVHSASLKARAGRIAEYCQTSI 121

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-YGCAKP-TIVVL 180
            + P  R+     Y G  KV  F   G+ K+  ++R+ E  +L   FL    + P T+ +L
Sbjct: 122  VHPSGRVAVTSAYTGSLKVTVFGEDGKGKD-IDVRIREQNLLSFAFLPLSTSSPFTLALL 180

Query: 181  YQDNKDARHVKTYEV----------ALKDKDFVEGPWSQN---NLDNG--ADLLIPVPPP 225
            + D    RH+ T  +          +L   D  E P +     NLD+   A  ++ VPPP
Sbjct: 181  HIDQNGKRHLVTRSLKHVPEPGSTKSLASLDISE-PTAHIPDINLDDEWEATSVVGVPPP 239

Query: 226  L----CGVLIIGEETIVYCSAN-----------------------AFKAIPIRPSITKA- 257
                  GV++ GE    + +                           K+ P R    K  
Sbjct: 240  RPGARAGVMVFGEGQARWYAVKEEGAPDPKGKRRSSTAGSPTQEKKGKSKPPRVEEAKVG 299

Query: 258  --YGRVDA----DGSRYLLGDHAGLLHLLVITHEKEK--VTGLKIELLGETSIASTISYL 309
              +GR+ A    D  + L+ D  G L+LL +   + +  V  ++ E LGE S  S+I++L
Sbjct: 300  LPWGRIAATCAIDEEKLLVSDEYGKLYLLALHRRQSEGPVVSIQREALGEISSPSSITHL 359

Query: 310  DNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVT 369
             ++  ++ S  GDSQLI L          + VL+ ++NL PI DF V D E+ GQ Q+VT
Sbjct: 360  TSSYFFVTSKCGDSQLISLTPSAICGTGNIAVLDTHLNLAPISDFVVTDPEKIGQQQIVT 419

Query: 370  CSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRIL 428
             SG    GSLR+VR+G+   E   +E +   + ++ L+ + D  +  +LV S +  T + 
Sbjct: 420  ASGRMNTGSLRVVRSGVAFEELGLLEQVMNTRSIFPLKINFDAEYHLYLVTSSLHRTTLY 479

Query: 429  AMNLED------ELEETEIEGFCSQTQTLFCHDAIYNQL-VQVTSGSVRLVSSTSRELRN 481
            +M  +D      E++E+E  G   Q  TL   +   + + VQVT+GSV  +   + E R+
Sbjct: 480  SMRGDDSSPQFEEVDESEARGIVRQVPTLAAGNIREDDIFVQVTAGSVVAIDLITWEQRS 539

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYL--EIGDGILTEVKHAQLEY---EISCLD 536
             WK  P   +  A  N  +V+    GG+LV+L  +    I+     +   +   EISC+ 
Sbjct: 540  IWK--PHVEIVCAAVNGQRVVAGLKGGYLVHLIPQRDQFIVANDWKSPGSWGLTEISCIA 597

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII------PRSVLLCAF 590
            ++P   +      AA+G W    V+IF L D     +E    E I      P S +L  F
Sbjct: 598  LDPT-LSAELGNYAAIGFWGTNQVKIFYLGDETHRFEELKLAEPISPEDHLPVSTILTTF 656

Query: 591  EGIS---YLLCALGDGHLLNFLLNMKT--GE----LTDRKKVSLGTQPITLRTFSS-KNT 640
             G S   +LL  LG+G + ++ L  +   GE     TD+K  SLGT+PI L   +     
Sbjct: 657  -GTSNRPHLLVGLGNGTISSYALKTEIVLGEPSVRATDKKIFSLGTKPIMLNACTDLGRE 715

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            +++FA  DRP +++  N +L  S + L+++      +   FP S   A    L IG I +
Sbjct: 716  SNIFACGDRPALLFLKNDRLTASPIKLRDIHAGSVLHIPQFPSSFIFASASTLLIGQIRE 775

Query: 701  IQKLHIRSIPLG-EHPRRICHQEQSRTFA-ICSLKNQSCAEESEMH--FVRLLDDQTFEF 756
             QK+ +R+I LG + P R+ +    R +  +C  K  +  ++ E++    +L DD TFE+
Sbjct: 776  SQKIDVRTISLGLDTPIRLTYHRGLRAYGVVCQRKELNREDDREIYSSSFKLFDDITFEY 835

Query: 757  ISTY---PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF-IVEDGK 812
            ++ +   P +      +I   +  +DS+ +  VGT      E + +KGRIL+F  V + K
Sbjct: 836  LNNFTARPDEQMMCVTTIPDSTGEEDSD-FLVVGTYEATGAEEDVSKGRILIFEEVPNRK 894

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            L+L+   +  G VY++      L AAIN  +Q++      D  R ++S        +A  
Sbjct: 895  LKLVVSHDVGGCVYAVTNVGANLAAAINGTLQVFSLHRSHDDIR-IESVAKWSSAYVASS 953

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            +  RG+ ++VGD M+++ +L +   +  +E    DY + W+  +E +D+   +GAE N N
Sbjct: 954  LICRGNTLLVGDAMRAVCILRWTGAK--LETLYHDYASLWIQTLESIDEGGVIGAELNNN 1011

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP--DSDVGQIPTVIFGT 990
            + T RK+         G+LE  G ++ GE +NRFR  SL    P    +      ++F T
Sbjct: 1012 IVTWRKD---------GKLERDGMWYFGEGINRFRRASLNAAAPGAGGNNAGRGNLVFCT 1062

Query: 991  VNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK-------KTVDA 1043
              G IG++ASL  +  + L  LQ N+  VI+G G + H + R+  +         +   A
Sbjct: 1063 NTGRIGIVASLDEDLSMQLSNLQRNIGSVIQGPGKVEHSRRRAPQSTPGLPTILTQNTHA 1122

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTM--NVSVEELCKR-------VEELTRLH 1088
              F+DGD +E FL L  +  DE+ + +      E+L  R       +EEL RLH
Sbjct: 1123 VGFIDGDFVEKFLYLDPSS-DEVMRILEGKNKYEQLGNRYHDIVQMLEELQRLH 1175


>gi|194377326|dbj|BAG57611.1| unnamed protein product [Homo sapiens]
          Length = 451

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 247/364 (67%), Gaps = 15/364 (4%)

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
            S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PEE
Sbjct: 92   SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE 151

Query: 796  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
             EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       
Sbjct: 152  AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE---- 207

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSA
Sbjct: 208  KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA 267

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 974
            VEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ 
Sbjct: 268  VEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQN 327

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF
Sbjct: 328  LGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSF 387

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEEL 1084
            + E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEEL
Sbjct: 388  HTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEEL 447

Query: 1085 TRLH 1088
            TR+H
Sbjct: 448  TRIH 451



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 54/67 (80%)

Query: 4  WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
          +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3  YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64 TLELFRP 70
           +ELFRP
Sbjct: 63 VMELFRP 69


>gi|322706594|gb|EFY98174.1| DNA damage-binding protein 1 [Metarhizium anisopliae ARSEF 23]
          Length = 1121

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 305/1137 (26%), Positives = 551/1137 (48%), Gaps = 130/1137 (11%)

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGI 122
            L+  +P     D LFI T+R+++  + W+ E+++L  + + + DV+++  R + +    +
Sbjct: 2    LQRLKPKDSETDLLFIGTDRFQYFNVAWNPETNQLDTVEQTIEDVAEQYMRHSQSQNKCL 61

Query: 123  IDPDCRLIGLHLYDGLFKV--IPFDNKG---QLKEAFNIRLEELQVLDIKFLYG-CAKPT 176
            +DP  + + +HL++G+  V  +P   KG   +L+    +RL EL +    FL+     P 
Sbjct: 62   VDPTGKFMAMHLWEGVLNVFRLPM-RKGMTTKLEALDQVRLTELWMKASTFLHSQTGHPK 120

Query: 177  IVVLYQDNKDARHVKTYEVALKDKDFVEG------PWSQNNLDN-----GADLLIPVP-- 223
            I  LY+   D    +     L  KD   G      P  +  LD       A +LIPVP  
Sbjct: 121  IAFLYKTQTDQEEARIAVYRLT-KDDSRGNVARFDPHRERELDQIISDPYASMLIPVPFR 179

Query: 224  --------------PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAY-GRVDADGSRY 268
                            L G+L++GE  I Y  +  +  +       K Y    + D   Y
Sbjct: 180  EEKRYHVRHNEGAKAHLGGLLVVGETLITYFDSLTYSRVSSTLQDPKIYVAWTEYDDVHY 239

Query: 269  LLGDHAGLLHLLVITHEKEK----VTGLKIELL------GETSIASTISYLDNAVVYIGS 318
            LL D  G L +L I    E     VTG+ I  +      G TS AS++ Y+ N ++++ S
Sbjct: 240  LLADDYGRLDILTIETATESTGIVVTGMAISPMRFPDSSGCTSRASSLVYMGNDMLFLAS 299

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQ 366
             +GDSQL+++++  DA+   + V +   N  PI+DF ++D+  +            GQ +
Sbjct: 300  HHGDSQLLRIDI--DAQ--VMVVAKALSNNAPILDFAIMDMGNREGDSQFGNAFSSGQAR 355

Query: 367  VVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
            +V   GAY DGSLR +R+G+G+ +Q  + E+Q  KG+++LRS      DT LVVS +++T
Sbjct: 356  IVAGCGAYHDGSLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHQSSHVDT-LVVSSVADT 414

Query: 426  RILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
            R+L  +    +EE    +G     +TL   +    QL+QVT  S  L+ S S      W 
Sbjct: 415  RVLRFDSAGGIEEVYAFQGLTLDMETLLAVNISDGQLLQVTPKSAVLLDSESGVNLCSWD 474

Query: 485  SPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDIN 538
            +P G ++  A+AN    LL+  G  LV L + D +   ++    +       +ISCL  +
Sbjct: 475  APSGKAITAASANKGWALLSIDGSLLVSLNLHDNLAAVLRDTSGDESSTQPDQISCL--H 532

Query: 539  PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGIS 594
               ++P    I  VG W   ++ I  L  L  +  E L        +PR + L       
Sbjct: 533  AARDSP---DIGVVGWWASGTISIVDLATLQPLHGEPLRQTEDSASVPRDIALVQLHPPQ 589

Query: 595  Y----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDR 649
                 LL AL DG+++ F ++++   ++ RK V+LG+ P  L     ++ T +VFA ++ 
Sbjct: 590  VSGPTLLIALEDGNVVTFDMSIQGYTISGRKSVTLGSSPARLHVLPQEDGTCNVFATTEH 649

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI 709
             ++IYS+  +++YS     + +++ PF+S AFP+S+ ++ +  + +  ID  +  H++++
Sbjct: 650  ASLIYSAEGRIIYSATTADDATYVAPFDSEAFPNSIVLSTDSHIRLSHIDKERLTHVKTL 709

Query: 710  PLGEHPRRICHQEQSRTFAICSLKNQSCA-EESEMHFVRLLDDQTFE-------FISTYP 761
             + E  RR+ +    + F +  +K +    EE      R++D+  F+       F ++  
Sbjct: 710  SVKETVRRVAYSPTLKVFGLGCIKKELIQNEEVITSSFRIVDEIIFQELGKPFIFNTSTS 769

Query: 762  LDTFEYGCSILSCSFSDD-SNV--YYCVGTAYVLP----EENEPTKGRILVFIV-EDGKL 813
            L+  E   +++     D   N+   + +GT+++      EEN+ T+GRILV  V E+ ++
Sbjct: 770  LEMVE---TVIRAELPDSMGNLAERFIIGTSFITDDDAIEEND-TRGRILVLGVDENRQV 825

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV 873
              I     KGA   L      ++A +++ + +Y ++        LQ    +      L +
Sbjct: 826  YQIVSHNLKGACRCLGTLGEHIVAGLSKTVVVYHYVEETTVFGSLQKLAAYRPASFPLSL 885

Query: 874  QTRGDFIVVGDLMKSISLLIY-KHEEGA---IEERARDYNANWMSAVEILDDDIYLGAEN 929
               G+ I V DLM+S++L+ +   E+G+   +EE AR Y   W ++V  LD + +L A+ 
Sbjct: 886  DISGNIIGVVDLMQSLTLVEFIPSEDGSRAKLEETARHYQPGWATSVAHLDGERWLEADA 945

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL-----VMRLPDSDVGQI- 983
              N+  +++N E  T+++R +LEV  E ++GE +N+ R   +      +  P + +G + 
Sbjct: 946  QGNIIVLQRNPEAPTEQDRSKLEVTSEMNIGEQINQIRKLHVASNENAVVSPKAFLGSVG 1005

Query: 984  ----------PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
                        ++   + G + +   + P+ Q L L   Q+ L+  I   G ++   WR
Sbjct: 1006 LSETIITCWNQLLMLVQIEGTLYLFGEIAPNYQDLLL-TFQSRLQDYIYAPGNVSFNLWR 1064

Query: 1033 SFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +F N+ +  D    F+DG+++E FLDL   + + + + +  SVE++   +EEL R+H
Sbjct: 1065 AFRNKAREGDGPFRFVDGEMVERFLDLDEAKQELVCEGLGPSVEDMRNMIEELRRMH 1121


>gi|328858656|gb|EGG07768.1| hypothetical protein MELLADRAFT_105631 [Melampsora larici-populina
            98AG31]
          Length = 1216

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 339/1244 (27%), Positives = 562/1244 (45%), Gaps = 191/1244 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            YV  A  PT+V H+   +F  P   +LI+ K +++EI+ + P  L  +  +P++G I  +
Sbjct: 3    YVGHAQLPTSVRHAIKCSFLEPHSQSLILCKPSQLEIYAIEPDQLNLLHTLPVFGLIDHI 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
            + +         L + T       L++  +S  +IT A   ++    RP D  Q  I+DP
Sbjct: 63   QSYIKQPNQTATLLVLTSELNLFTLRYCPQSKSVITTATISLNQPGARPADYLQTSIVDP 122

Query: 126  DCRLIGLHLYDGLFKVIPF----------------------------------------D 145
              R + LH  +G+  +IP                                         D
Sbjct: 123  HSRCLVLHALNGILHLIPLEPSSKPKPKHLEPSLGGRRKRSTISLKSNHPPNPDLDTNID 182

Query: 146  NKGQLKEAFNIRLEELQV--LDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALK----D 199
               +L +   +RL E+ V  LD   L     PT+++LY ++   R +++  + L     D
Sbjct: 183  PDSELYQIVQLRLNEVNVHALDFAALPAHLPPTLLILYSNHMGQRVLRSRSIDLITANCD 242

Query: 200  KDFVEGPWSQNNL--DNGADLLIPVPPPLCGVLIIGEETI--VYCS----------ANAF 245
            +D        N+L  D    L+IP+P     VL++GE+++  VY +           +  
Sbjct: 243  QDICP-----NHLCPDLDTSLIIPIPDDQGSVLLVGEDSVELVYLTDRLPNPTGKGKSRD 297

Query: 246  KAIPIRPSITKA----------------------YGRVDADGSRYLLGDHAGLLHLLVIT 283
            +++  R   T+A                      + +V+     +L+GD  G  H+LVI 
Sbjct: 298  RSVDSRTGATRAPESDKLLKHVTSINIPLGSYTCFCKVEDQPDVWLIGDLYG--HVLVIR 355

Query: 284  HEKEKVTG--LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA--KGSYV 339
             E+ +     L+ +  G+ S    + Y+ +  +Y+ S YGDSQL++++    A  +    
Sbjct: 356  LERPEGGKPLLRYQQAGQVSSPEALVYISDRFIYLASHYGDSQLLRISALDSALAQDCQP 415

Query: 340  EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 399
            EV+  Y NL PI D CVVD       Q+VTCSGAY+DGSLRI+ +GI + +   + + G 
Sbjct: 416  EVVANYPNLAPISDVCVVDQSEGFDHQLVTCSGAYQDGSLRIITHGITLTDLGMLPIAGA 475

Query: 400  KGMWSLRSSTDDPFDTFLVVSFISETRILAM---NLEDELEETE-IEGFCSQTQTLFCHD 455
            + +WS+   T       L+V F +ETR L +       ++EE +   GF S  +T+    
Sbjct: 476  EHIWSI--DTPHSPQVTLIVGFRNETRFLIIENDQFSQDVEELDSFSGFKSDRRTILAGQ 533

Query: 456  AIYNQ------LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 509
             I          +QVT   V +V    R     W+      + VA   AS  ++A     
Sbjct: 534  IISQGHHVQAFPIQVTQEEV-IVGEMFR-----WEPTSNDLITVAAIGASLTVVAL-QRE 586

Query: 510  LVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLN 569
            ++ L + D +L + +  +   E+SCL I+P        ++ AVG W   S+ + SL  +N
Sbjct: 587  VLLLHVKDNLLVQSESIRFPNEVSCLAIDP------SQKVLAVGQWISNSIALVSLDQMN 640

Query: 570  LITKEHLGGEIIPRSVLLCAF-EGIS-YLLCALGDGHLLNFLLN-MKTGELT---DRKKV 623
            + T    G +    SVL   F EGI  +LL  + DG L++  L  ++ G L     R+ V
Sbjct: 641  VSTTIETGSDFGVHSVLFTNFGEGIDPHLLAGMDDGELISIKLQGLENGSLVQEQSRRTV 700

Query: 624  SLGTQPITLR-------TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
             LG +PIT+        T        V+  S+ PT++   + +L Y  V L + +     
Sbjct: 701  VLGHRPITMSRIVLDIPTDQQLGKPAVWIHSEHPTLMIEVDGRLKYRPVALGDATDAIKI 760

Query: 677  NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL-GEHPRRICHQEQSRTFAICSLK-- 733
             +        +  EG + +G ID ++K+HI  IPL GE P+RI H +  R + +  +   
Sbjct: 761  GTRGVG---VVTSEG-IRLGRIDSLEKIHISKIPLGGEQPKRIAHSKSMRAYGVVCVSQK 816

Query: 734  -NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
             NQ   E  +   V+++DD TFE +  + L + E G SI +     D    + +GT +V 
Sbjct: 817  VNQQTGELDKGSSVKIIDDVTFELLFDFQLLSIEQGTSIAAIELGKDLIEDFIIGTGFVN 876

Query: 793  PEENEPTKGRILVFIV-----EDGKLQLIAEK---ETKGAVYSLNAF-NGKLLAAINQKI 843
            P E++   GRIL   +     ++G L+    K   + KG V+ L     GK +A+ N  +
Sbjct: 877  PNESQSNTGRILTIGLSSKHDQEGNLREFKLKRMTKVKGTVHGLGGLPGGKFVASANAFV 936

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
              +     ++       +    G + +  V T  ++I+VGDL KSI +L +  ++ +++ 
Sbjct: 937  HAFGINEEEEDEGFEVLDTWGGGFV-SQTVLTEKNWIIVGDLYKSIVVLEFDLKKFSLKV 995

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTV--RKNSEGATDEER------------- 948
              RDY+A  +  + ++ D +++ A+  FNLFTV  R+  +G  +E+              
Sbjct: 996  LGRDYSAMSVRPIGMISDRVFVAADTEFNLFTVEMRERQKGLKEEDEDEEGLSVEEEKGD 1055

Query: 949  -------------------GRLEVVGEYHLGEFVNRFRHGSLVMRLPD---SDVGQIPTV 986
                                 L+ VG +HLGE VN F+ GSLV  L      D+     +
Sbjct: 1056 DDEWEEEERRMRVEKVFNDDHLDTVGGFHLGENVNHFKAGSLVKSLKHFYGQDLKYGGKL 1115

Query: 987  IFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            IF +  G IGVI  L   + Y  L+ L+  L+K I  +GGL+  ++R F N+ K VD   
Sbjct: 1116 IFVSSTGGIGVIIKLEDLKIYKHLKALEDRLKKEILSIGGLDSTEFRKFKNKWKKVDGCE 1175

Query: 1046 FLDGDLIESFLDLSRTRMDEISKTMN-VSVEELCKRVEELTRLH 1088
            FLDGDLI+   + S  R   I +  + V ++E+   VEEL+  H
Sbjct: 1176 FLDGDLIQRLYNDSFKRKSLIKEDQDEVGIDEV---VEELSWFH 1216


>gi|90108802|pdb|2B5N|A Chain A, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108803|pdb|2B5N|B Chain B, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108804|pdb|2B5N|C Chain C, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108805|pdb|2B5N|D Chain D, Crystal Structure Of The Ddb1 Bpb Domain
          Length = 323

 Score =  369 bits (946), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 183/323 (56%), Positives = 241/323 (74%), Gaps = 4/323 (1%)

Query: 382 VRNGIGINEQASVELQGIKGMWSLRSSTD-DPFDTFLVVSFISETRILAMNLEDELEETE 440
           +RNGIGI+E AS++L GIKG+W LRS  + + +DT LV+SF+ +TR+L +N E E+EETE
Sbjct: 4   MRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDT-LVLSFVGQTRVLMLNGE-EVEETE 61

Query: 441 IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 500
           + GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQ
Sbjct: 62  LMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQ 121

Query: 501 VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 560
           V++A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS 
Sbjct: 122 VVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA 180

Query: 561 RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 620
           RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DR
Sbjct: 181 RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDR 240

Query: 621 KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 680
           KKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  
Sbjct: 241 KKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDG 300

Query: 681 FPDSLAIAKEGELTIGTIDDIQK 703
           +PDSLA+A    LTIGTID+IQK
Sbjct: 301 YPDSLALANNSTLTIGTIDEIQK 323


>gi|315039795|ref|XP_003169275.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
 gi|311337696|gb|EFQ96898.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
          Length = 1076

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 325/1165 (27%), Positives = 536/1165 (46%), Gaps = 173/1165 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIA-------------------KCTRIEIHLLT 46
            YVV  H  +++ H+    F SP E  L++A                   K  R+E++  +
Sbjct: 3    YVVPIHSASSIRHALRARFISPDEDCLVVASVPSFSTPSLDCTRLTSPRKANRLELYTQS 62

Query: 47   PQGLQPMLDVPIYGRIATLE-LFRPHGEA---QDFLFIATERYKFCVLQWDAESSELIT- 101
              GL       IYGRI  L+ L RP        D LF+ T++Y +  L WDA   +L T 
Sbjct: 63   ADGLILQHSRAIYGRITLLQKLSRPTTAGPVLTDVLFVGTDQYAYFSLTWDAAHDQLRTE 122

Query: 102  RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF----------------- 144
            R   D++D   R   +     IDP    + L +Y+G+  VIP                  
Sbjct: 123  RKYIDLADGSLREAHSDDRCQIDPSGSFLTLEVYEGVVSVIPLATADSHKRAKSAASTSA 182

Query: 145  -----DNKGQLKEAFNIRLE-ELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALK 198
                  N+   + A N + +  L++ D+K  +        V+  D   A  +K     L 
Sbjct: 183  STAPTSNRTARRAATNSQGKVRLKLRDLKHTHA-------VVTGDGGSAAELKDV-TTLS 234

Query: 199  DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SI 254
            D+           LD GA +LIPVP PL G+LIIGE +I Y   +  + I  RP    ++
Sbjct: 235  DE-----------LDLGASILIPVPRPLGGLLIIGESSIKYVDVSRNETIS-RPLAESTV 282

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
              A+ +VD  G R+LL D  G L  L++  +                        DNAV 
Sbjct: 283  FVAWEQVD--GQRWLLADDYGRLFFLMLVLDA-----------------------DNAV- 316

Query: 315  YIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAY 374
                     +  K++L                 LG   +F        GQ ++VT SGA+
Sbjct: 317  ---------ESWKVDL-----------------LGTTREFS------SGQTRIVTGSGAF 344

Query: 375  KDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
             DGSLR VR+G+GI +   +  ++ I  +W LRS+  +PF   L+VSF++ETR+   + +
Sbjct: 345  GDGSLRSVRSGVGIEDLGVLASMEHITDLWGLRSACPEPFYDTLLVSFVNETRVFHFSPD 404

Query: 434  DELEETEIE--GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
             E+EE E +  G      TL   +   N+++QVT  + +++   S  +   W+S    S+
Sbjct: 405  GEVEEKEDDFLGLVFSRSTLLATNIPENRILQVTESTAKVIDLDSGMVI--WQSSHNESI 462

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI--NPIGENPSYSQI 549
              A+AN   ++L  GG  LV + +        +  +++ ++S + I  +PI       Q 
Sbjct: 463  TSASANDDYLVLVLGGIRLVCISLSTFEQVGSRDFEVDNQVSGMTIPASPI-------QA 515

Query: 550  AAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAFEG--ISYLLCALGDGHL 605
              V +     + I  LP L +  K+ LG  GE IPRSV++          L  ++ DG +
Sbjct: 516  CIVCLPQSAEIVILDLPGLEVKNKQALGEPGEAIPRSVIVAEILAGKPPTLFVSMADGTV 575

Query: 606  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSN 664
             +F  ++ T  ++   K++LG++  + +     N  + VFA  D P++I++S  +++YS 
Sbjct: 576  FSFSFDINTFTISGSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYSA 635

Query: 665  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 724
            V+    S +C  N+ A+P S+A++ + EL I  +D+ +   I ++P+    RR+ +    
Sbjct: 636  VDSASSSRICSLNTQAYPGSIALSNQNELKIALVDEERTTQIHTLPMHASVRRLAYSPLE 695

Query: 725  RTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILS---CSFSD 778
            + F + ++K    +  EE    FV L D+  F  +STY L   E   C I S   C   +
Sbjct: 696  KAFGLGTVKRTISNGVEEVSSSFV-LADEIHFRPLSTYDLRPDELVECVIRSQVNCGKDE 754

Query: 779  DSNVY----YCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNG 833
              N+     + VGTA++    ++  +GRIL+F V   + L LI +K   GA  +L   + 
Sbjct: 755  VGNLMSKDLFFVGTAFLDDVGDDHIRGRILIFEVNKSRELSLIVDKSLMGACRTLAVMDP 814

Query: 834  KLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
             LL A + + + ++K      G   L+    +      + +   GD + V D+MKS+SL+
Sbjct: 815  SLLVAGLVKSVSVFKLARDRFGNIFLEKHTAYRTSTAPIDISVTGDTVAVADVMKSMSLV 874

Query: 893  IYK-----HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE 947
             Y       +E   EE AR Y   W +AV ++++ +YL A+   NL  +++N+ G T+ +
Sbjct: 875  QYTPAEKDEQEPKFEEIARHYQTLWSTAVTLIEEHVYLLADAEGNLVVLQQNTTGVTESD 934

Query: 948  RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL 1007
            R RL+   E  LGE VNR  H   V    ++ V      +  TV+G I +   +      
Sbjct: 935  RKRLQPTSEIRLGEMVNRI-HPITVQTHTETAVSA--RALLATVDGSIYLFGLINPAYID 991

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEI 1066
             L +LQT +  +    G +   ++R+F    +  D    F+DG+LIE FL  + T  +EI
Sbjct: 992  LLLRLQTAMASITVSPGEIPFSKYRAFRTTVRQSDEPFRFVDGELIERFLSCTPTMQEEI 1051

Query: 1067 SKTM---NVSVEELCKRVEELTRLH 1088
            +  +   NV+V  L + +EEL R+H
Sbjct: 1052 ANRLDDSNVTVSSLKEMIEELRRMH 1076


>gi|322700871|gb|EFY92623.1| DNA damage-binding protein 1 [Metarhizium acridum CQMa 102]
          Length = 1121

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 301/1137 (26%), Positives = 548/1137 (48%), Gaps = 130/1137 (11%)

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSEL--ITRAMGDVSDRIGRPTDNGQIGI 122
            L+  +P     D LFI T+R  +  + W++E+++L  + + + DV+++  R + +    +
Sbjct: 2    LQRLQPKDSETDLLFIGTDRLNYFNVAWNSETNQLDTVEQTIEDVAEQYMRHSQSQNKCL 61

Query: 123  IDPDCRLIGLHLYDGLFKV--IPFDNKG---QLKEAFNIRLEELQVLDIKFLYG-CAKPT 176
            +DP  + + +HL++G+  V  +P   KG   +L     +RL EL +    FL+     P 
Sbjct: 62   VDPTGKFMAMHLWEGVLNVFRLPM-RKGITTKLVALDQVRLTELWMKASTFLHSQTGHPK 120

Query: 177  IVVLYQDNKDARHVKTYEVALKDKDFVEG------PWSQNNLDN-----GADLLIPVP-- 223
            I  LY+   D    +     L  KD   G      P  +  LD       A +LIPVP  
Sbjct: 121  IAFLYKTQTDQEEARIAVYRLT-KDDNRGNVASFDPHRERELDQVISDPYASMLIPVPFR 179

Query: 224  --------------PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAY-GRVDADGSRY 268
                            L G+L++GE  I Y  +  +  +       K Y    + D   Y
Sbjct: 180  EEKRYHVRNNEGAKAHLGGLLVVGETLITYFDSLTYSRVSSTLQDPKIYVAWTEYDDVHY 239

Query: 269  LLGDHAGLLHLLVITHEKEK----VTGLKIELL------GETSIASTISYLDNAVVYIGS 318
            LL D  G L +L +    E     VTG+ +  +        TS AS++ Y+ + ++++ S
Sbjct: 240  LLADDYGRLDILTVETTTESTGIVVTGMAVSPMRFPDSSAYTSRASSLVYMGDDMLFLAS 299

Query: 319  SYGDSQLIKLNLQPDAKGSYVEVLERYV-NLGPIVDFCVVDLERQ------------GQG 365
             +GDSQL+++++  DA+   V VL + + N  PI+DF ++D+  +            GQ 
Sbjct: 300  HHGDSQLLRIDI--DAQ---VMVLVKTLSNNAPILDFAIMDMGNREGDSQFGNAFSSGQA 354

Query: 366  QVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISE 424
            ++V   GAY DGSLR +R+G+G+ +Q  + E+Q  KG+++LRS      DT LVVS +++
Sbjct: 355  RIVAGCGAYHDGSLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHESSHVDT-LVVSSVAD 413

Query: 425  TRILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
            TR+L  +   ++EE    +G     +TL   +    +L+QVT  S  L+ S S      W
Sbjct: 414  TRVLRFDSAGDIEEVYAFQGLTLDMETLLAVNISDGRLLQVTPKSAVLLDSESGVNLCSW 473

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDI 537
             +P G ++  A+AN    LL+  G  LV L + D +   ++    +       +ISCL  
Sbjct: 474  DAPSGKAITAASANKGWALLSIDGSSLVSLNLHDNLAAVLRDTSGDESSGQPDQISCL-- 531

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGI 593
            +   ++P    I  VG WT  ++ I  L  L  +  E L        +PR + L      
Sbjct: 532  HAARDSP---DIGVVGWWTSGTISIVDLATLQPLHGEPLRQTEDSASVPRDIALVQLHPP 588

Query: 594  SY----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASD 648
                  LL AL DG+++ F ++M+   ++ RK V+LG+ P  L     ++ T +VFA ++
Sbjct: 589  QVSGPTLLIALEDGNVVTFDMSMQGYTISGRKSVTLGSSPARLHVLPQEDGTCNVFATTE 648

Query: 649  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRS 708
              ++IYS+  +++YS     + +++ PF+S AFP+S+ ++ +  + +  ID  +  H+++
Sbjct: 649  HASLIYSAEGRIIYSATTADDATYVAPFDSEAFPNSIVLSTDSHIRLSHIDKERLTHVKT 708

Query: 709  IPLGEHPRRICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFE-------FISTY 760
            + + E  RR+ +    + F +  +K +    EE      R++D+  F+       F ++ 
Sbjct: 709  LSVKETVRRVAYSPTLKVFGLGCIKKELIHNEEVITSSFRIVDEIIFQELGKPFIFNTST 768

Query: 761  PLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLP----EENEPTKGRILVFIV-EDGK 812
             L+  E   +++     D +      + +GT++V      EEN+ T+GRILV  V E+ +
Sbjct: 769  SLEMVE---TVIRAELPDSTGNLAERFIIGTSFVTDDDAIEEND-TRGRILVLGVDENRQ 824

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            +  I     KGA   L+     ++A +++ + +Y ++        LQ    +      L 
Sbjct: 825  VYQIVSHNLKGACRCLSTLGEHIVAGLSKTVVVYNYVEETTVFGSLQKLAAYRPASFPLG 884

Query: 873  VQTRGDFIVVGDLMKSISLLIY-KHEEGA---IEERARDYNANWMSAVEILDDDIYLGAE 928
            +   G+ I V DLM+S++L+ +   ++G+   +EE AR Y   W ++V  LD + +L A+
Sbjct: 885  LDISGNIIGVVDLMQSLTLVEFIPSKDGSRAKLEEVARHYQPGWATSVTNLDGERWLEAD 944

Query: 929  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL-----VMRLPDSDVGQI 983
               N+  +++N E  T+++R +LEV  E ++GE +N+ R   +      +  P + +G +
Sbjct: 945  AQGNIIVLQRNPEAPTEQDRSKLEVTSEINIGEQINQIRRLHVASNENAVVSPKAFLGSV 1004

Query: 984  -----------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
                         +I   + G + +   +  +    L   Q  L+  I   G ++   WR
Sbjct: 1005 GLSETTINCWTQLLILVQIEGTLYLFGEIAPKYQDLLLTFQARLQDYIYAPGNVSFNLWR 1064

Query: 1033 SFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +F N+ +  D    F+DG+++E FLDL   + + + + +  SVE++   +EEL R+H
Sbjct: 1065 AFRNKAREGDGPFRFVDGEMVERFLDLDEAKQELVCEGLGPSVEDMRNMIEELRRMH 1121


>gi|393243160|gb|EJD50676.1| hypothetical protein AURDEDRAFT_112250 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1140

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 316/1113 (28%), Positives = 527/1113 (47%), Gaps = 120/1113 (10%)

Query: 30   LNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCV 89
            L LI+A   RIE H LT   ++    + ++ R+  L++    G       + T+      
Sbjct: 26   LALIVAYADRIEAHALTESAVERTARMVLHARV--LDMVALKGPR---FLVTTDMPDPTA 80

Query: 90   LQWDAESSELITRAMGDVSDRIGRPTD--NGQIGIIDPDCRLIGLHLYDGLFKVIPFDNK 147
            L  +    +L+     D+  R  RP +   G     D +     +H    L  +   D +
Sbjct: 81   LVLELRGDKLVLVCNRDLKARGARPAEFFTGAFATDDGEYAF-SMHYKGKLHALRLDDRR 139

Query: 148  GQL-KEAFNIRLEELQVLDIKFL-YGCAKPTIVVLYQDNKDARHVKTYEVALKDKDF--- 202
            G L +E F+  L EL VL    +      P + +L+ D+ D R V T  V L + D    
Sbjct: 140  GVLGRECFDCNLRELTVLSACVVPVESDLPVLTILHTDSDDKRRVTTRPVLLDESDVGER 199

Query: 203  VEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA------------------ 244
             E  +++   DN    L+P+    C + + G    VY  A+A                  
Sbjct: 200  TEHLFTKVISDN-THTLVPLRNHGCILTMGGTSLRVYKVAHADVRLSPAHKKSRKRQSTT 258

Query: 245  --FKAIPIRPSITKA-------YGRVDA----DGSRYLLGDHAGLLHLLVITHEKEKVTG 291
               KA    P+IT+A       +G + A    D  R L+GD  G L L+ ++  +     
Sbjct: 259  GKGKAAADEPAITEAAVSEPWPWGEIVAWTMVDDERILIGDAYGRLVLVTVSLNENAAFT 318

Query: 292  LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
            +   LLG+TS A+T +YLDN ++Y+GS +GDSQL++L+   DA GSY+ V++ Y NL PI
Sbjct: 319  ISPVLLGQTSPATTFTYLDNGILYVGSHFGDSQLVRLSTAADASGSYISVVKAYSNLAPI 378

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTD 410
            VD  +VD+    Q QVVTCSG Y  GSLR+V+    + + A ++     + ++ LR+S+D
Sbjct: 379  VDAVIVDINDSNQPQVVTCSGGYNTGSLRVVQKSAELEQLAIIDAFPHTENIFPLRASSD 438

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV------QV 464
               DT ++VS   +T+ +  NLE E    E   F ++  TL   + ++   V      Q+
Sbjct: 439  AKEDTRMLVSSHMDTKFV--NLEGEDLSVEESPFVTREPTLAASNFVHKDQVETPYVLQI 496

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVK 524
            T+  V LV++      +  + P G  + +A+ + +Q LLA   G LVY+ + +  +   K
Sbjct: 497  TTKRVVLVNTVVDMEIHSHEYPEG--IMLASCSRTQALLALSDGALVYIRLENDNINATK 554

Query: 525  HAQLEYEI----SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
              +LE+ +    S L I P       +    +  W +       L  +  + ++ +    
Sbjct: 555  GPKLEWTLRGQWSALCIEPADARGGPTDAVVIAKWDN----TVQLRRMGALFRDDIAHAT 610

Query: 581  IPRSVLLCAFEGISYLLCALGDG----HLLNFLLN--------MKTGELTDRKKVSLGTQ 628
            +  + L C     S LL   G G    H+L    N         K   L   + + LG+ 
Sbjct: 611  LQLASLAC-----SVLLVDFGQGRENRHVLAGCANGTVVAARVTKDWNLEAPRTIGLGSL 665

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ LR    ++   V A     TV+Y  + +L +S + +K++++  P ++ AF ++    
Sbjct: 666  PVRLR----RDGDRVVACGSLVTVLYWDSGRLQHSALAVKDITNAVPLHTPAFENTTVFI 721

Query: 689  KEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSCA---EESEMH 744
              G L I  +  +Q+LHI++IP+G E+PRRI +   ++ F + ++ +Q       ES   
Sbjct: 722  SPGSLLIARVKQVQRLHIKTIPMGSENPRRIAYNSHAKAFGVGTMHSQPVGVGEPESVTS 781

Query: 745  FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-YYCVGTAYVLPEENEPTKGRI 803
              ++L+  TF+ +S+  LD  E   S+ S     +S    + VGTAY+   E EP++GRI
Sbjct: 782  SFKILNQDTFDTLSSMQLDDNEEITSVASLPIMPESRTEMFVVGTAYIKDSEMEPSRGRI 841

Query: 804  LVF-IVED---GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL- 858
            LVF  +ED   G   L A  +  GAV SL + +G ++A +N  + LY+  LR +   E  
Sbjct: 842  LVFGSLEDSGTGGSWLTAFLQVTGAVLSLTSVDGLIVAGVNTAVILYE--LRRNTLSEAE 899

Query: 859  --------QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
                    Q +  +H +++   +  RGD I +GD + SI++L +KHE   +   AR +  
Sbjct: 900  RASHLTLRQKKEWNHNYVVT-SLAARGDTIYIGDSVASIAILRWKHE--TLHTIARHFGP 956

Query: 911  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 970
             +  A++++     + A  ++NL T  +  E  TD    +LE+ G YHLG+ VN+F  G 
Sbjct: 957  IFPLALDVMSSGSVITANIDYNLHTFHQ--ESPTDR---KLEIDGSYHLGDQVNKFIPGR 1011

Query: 971  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
            L    P      +   +F T  G IG++A    +    L  L+ N+ KV+   G   H+ 
Sbjct: 1012 L--SAPTVGASIVLEQVFVTSLGRIGIVAEADKDASWALSALERNIEKVLDQ-GAPKHDL 1068

Query: 1031 WRSFNNEKKTVDAK----NFLDGDLIESFLDLS 1059
            WR+ ++E    DA+    NF+DGD++E F D++
Sbjct: 1069 WRAPHSEHGVSDAQRSAANFIDGDMLERFYDVA 1101


>gi|170589359|ref|XP_001899441.1| Xeroderma Pigmentosum Group E Complementing protein [Brugia malayi]
 gi|158593654|gb|EDP32249.1| Xeroderma Pigmentosum Group E Complementing protein, putative
           [Brugia malayi]
          Length = 521

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 214/499 (42%), Positives = 318/499 (63%), Gaps = 29/499 (5%)

Query: 5   NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
           +Y+VTA+KPT VTH+ VG+F  P ELNL++AK  R+E+ L+TP+GL+P  +  ++GRIAT
Sbjct: 4   SYIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECSVFGRIAT 63

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
           ++LFR  GE  D L I T +Y   +++W   +SEL TRA G + DR+GRP++ G I  + 
Sbjct: 64  IKLFRAPGENVDSLLILTAKYHLAIIRW-TPTSELRTRASGHIVDRVGRPSETGMIATVH 122

Query: 125 PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
               ++   LYDGL KV+ + N+G+    FN+R ++L ++DI F+    +PT+  +YQD+
Sbjct: 123 SSGLMV-FRLYDGLLKVVQW-NEGKDLRGFNVRCDDLYIVDITFMSDPDRPTLAYIYQDD 180

Query: 185 KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS--- 241
            + RH+K   + + DK+     W  +NL+  A+++I VP P+ G LI G + I Y     
Sbjct: 181 -NGRHIKVVALNIDDKELSSPLWKHDNLEGEANIVIGVPEPVGGCLIAGPDAISYHKGGD 239

Query: 242 -ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK--------- 288
            A  +  +P   +  +    Y  VD DG RYLL D AG L++L++   K++         
Sbjct: 240 DALRYAGVPGSRLHNTHPNCYAPVDRDGQRYLLADLAGNLYMLLLELGKDQEQDENSAMY 299

Query: 289 VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGS-YVEVLERYVN 347
           V  +K+E LGET IA  + YLBN V +IGS +GDSQLI+L+ +P A G+ Y+ +L+ Y N
Sbjct: 300 VRDMKVESLGETCIAECMCYLBNGVCFIGSRFGDSQLIRLSTEPRADGTGYISLLDSYTN 359

Query: 348 LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
           L PI D  V  +   GQ Q++TCSGAYKDG++RI+RNGIGI E ASVEL+GIK M++LR+
Sbjct: 360 LAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKNMFTLRT 417

Query: 408 STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTS 466
             DD FD +L++SF SET +L +N E ELE+TEI GF     TL+     +++ ++QVT 
Sbjct: 418 R-DDEFDDYLILSFDSETHVLLINGE-ELEDTEITGFTVDGATLWAGCLFHSKTILQVTH 475

Query: 467 GSVRLVSSTSRELRNEWKS 485
           G V L+   + ++   WKS
Sbjct: 476 GEVILIDGDNIQV---WKS 491


>gi|170090007|ref|XP_001876226.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649486|gb|EDR13728.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1275

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 349/1284 (27%), Positives = 557/1284 (43%), Gaps = 214/1284 (16%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
            V T H+ ++V  S      +    +L++AK  R++++ L PQGL     V I+G++ T++
Sbjct: 4    VTTFHQSSSVLSSFKCQLGTRDTEHLVVAKLNRLDVYSLKPQGLHHECGVEIWGKVLTVK 63

Query: 67   LFRPHGEAQD--FLFIA---TERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
                 G A+    L IA    E   F  +    ++  L       + +RI RP +     
Sbjct: 64   AIPQIGSARSTIVLMIAHPDPELVFFTYIDRQGDNPALEVSKKLSLFERIARPAEFFNDV 123

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC-AKPTIVVL 180
            ++ P  +L  +  Y G  K+I     G   + ++++L E+ V  + FL     +  + +L
Sbjct: 124  LVHPSGKLALVSCYSGKLKIIRLKC-GTYDKDYDVQLPEVNVFSVTFLSSFNGEYAVAIL 182

Query: 181  YQDNKDARHVKTYEVALKDKDFV----------EGPWSQNNLD---NGADLLIPVPPP-- 225
            Y D ++   +   ++ +   D              P S   L         L+ VPP   
Sbjct: 183  YLDYQERVQLVARDILVNGDDITVSEEPSTLLHPTPISNKTLPFPTESVPQLVSVPPEEL 242

Query: 226  ----------LCGVLIIGEETIVYCSANAFKA----------IPIRPS------ITKAY- 258
                      L GVL++G   I+    ++ K+          +  R S      I KA  
Sbjct: 243  DEDTDVDDAFLGGVLVVGGRQILLFELSSEKSQEKQRGKRKRLESRKSSKDVTEIAKARE 302

Query: 259  ------GR--------------------VDADGSRYLLGDHAGLLHLLVITHEKEKVTGL 292
                  GR                    +D    RYL+GD  G L +L +  +K +  GL
Sbjct: 303  KEKEREGRRRKPKSSIEWPFSELAAWCAIDKAPYRYLIGDSFGRLSILSL--DKVQRIGL 360

Query: 293  KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK-------------LNLQPDAK---- 335
             +   GE S  ++++YL N +VY+GS  GDSQLI+             L + P+ K    
Sbjct: 361  VLIPFGEASSPTSLTYLTNQLVYVGSHSGDSQLIRLSPLPISSSESPTLPIPPEIKTVSP 420

Query: 336  ----------------------------------------GSYVEVLERYVNLGPIVDFC 355
                                                    GS++EVL  Y NL PI+D  
Sbjct: 421  NLLEALGHRKGKSKSVAEDHMDEDHDDEDDASQGYIVETHGSFIEVLSSYKNLAPILDAI 480

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFD 414
            +VD +  GQ  +VTCSGA   GS+ IVRNG    E   V  L G+ G+WS+R+  +D  D
Sbjct: 481  LVDTDGSGQQHIVTCSGARSTGSINIVRNGADFQEIGHVPGLTGVVGVWSVRTMLEDTTD 540

Query: 415  TFLVVSFISETRILAMNLEDE------LEETEIEGFCSQTQTLFCHD----------AIY 458
             +++VS    T +  ++          ++ T I    +   TL   +          ++Y
Sbjct: 541  RYILVSTNRSTHLFEIDDSGSTSTITPVDSTTIRSLVTTEATLAFSNLARRSSVGGSSVY 600

Query: 459  NQ---LVQVTSGSVRLVSSTSR----ELRNEWKS----PPG---YSVNVATANASQVLLA 504
                  VQV +   RL+ S +     EL  ++      P G     V  A+ANASQ+++A
Sbjct: 601  KNSPLAVQVVASGARLLKSNTAFGGYELVAQYSMLSSVPYGQRPLEVVAASANASQLVMA 660

Query: 505  TGGGHLVYLEIGDGI--LTEVKHAQLEY--EISCLDINPIGENPSYSQIAAVGMWTDISV 560
              GG L    +G+ +  L  +   Q +   EIS +   P+      S    V  W   ++
Sbjct: 661  ASGGKLTLWRLGENVDALEMIAGCQRKEGPEISAVSCAPLNTTKRTSPTIIVSYWQSNTI 720

Query: 561  RIF--SLPDLNLITKEHLGGEIIPRSVLLCAFEGIS---------YLLCALGDGHLLNFL 609
             I   SL  L  + K      ++ RSVLL  F   +         YLL  L +G + +F 
Sbjct: 721  EILQVSLKGLESVYKSPTLPALV-RSVLLYNFGSDTNPKGTDHHPYLLAGLANGTVASF- 778

Query: 610  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE 669
               K  +LTD+K + LG  P+ L     +    VFAA +R TV+   NK+L++S + LK+
Sbjct: 779  -RWKDKQLTDKKIIPLGHAPVNLMPCQVEGRHAVFAAGNRATVLSFENKRLVHSPIMLKD 837

Query: 670  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFA 728
            +S     N+  F  SL ++    L IG +  + KLHIRSIP G ++PR+I H+   + F 
Sbjct: 838  ISSAARLNTPTFASSLILSTPTGLFIGRVQGLGKLHIRSIPFGFDNPRKIAHEPSIKAFG 897

Query: 729  ICSL---KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS--FSDDSNVY 783
            +       N+    E      +LLDD +F  +  +  D  E   +++S S   +     +
Sbjct: 898  VAFTTMEPNRVNDPEISRSSFKLLDDTSFANLCQFNCDPDEETTAVVSFSQKIAGKPMPF 957

Query: 784  YCVGTAYVLPEENEPTKGRILVFIVEDG-----KLQLIAEKETKGAVYSLNAFNGKLLAA 838
            +CVGT      E EP+ GR+++F           L L+A  +  G VY+L     +++AA
Sbjct: 958  FCVGTYVYKAGEVEPSAGRLMIFTATTSTSSNLALSLMASTKVPGCVYALTVVQNQIVAA 1017

Query: 839  INQKIQLYKWMLRDDGTRELQSECGH-HGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            +N  + L++     D       +    H + L   + +  D +VVGD   SISLL  +  
Sbjct: 1018 VNSSVMLFRLESSSDSLSPSLIKVSEWHHNYLVTSLGSYADRVVVGDQPSSISLL--QVT 1075

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 957
            +  +  +ARDY   W   VE LD+   +GA ++ NLFT   + E A    R RLE  G Y
Sbjct: 1076 QSKLISQARDYGPLWPVCVEALDERHIIGANDSLNLFTF--SLEKAMG--RSRLERDGCY 1131

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY-LFLEKLQTNL 1016
            H+ + V +F  GSL      +        +F T +G IGV+  +  E+  L L  +Q NL
Sbjct: 1132 HVADLVTKFLRGSLSSSDASTTSPLTSEAMFFTSSGRIGVVVDVKDEELSLQLTNMQRNL 1191

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKN----FLDGDLIESFLD--LSRTRMDEI---- 1066
              VI+GVGG +H ++R+    + T DA +    FLDGD +E FL   LS  + +++    
Sbjct: 1192 ANVIQGVGGSSHSKYRAPKTTRGTSDADSGAIGFLDGDFLEQFLTHVLSPQQSEKVIQGQ 1251

Query: 1067 --SKTMNVSVEELCKRVEELTRLH 1088
               + + ++ E L   +E+L  LH
Sbjct: 1252 SPPERLTITREALQMVIEDLQSLH 1275


>gi|384080885|dbj|BAM11105.1| damage-specific DNA binding protein 1, 127kDa, partial
           [Siebenrockiella crassicollis]
          Length = 364

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 186/367 (50%), Positives = 237/367 (64%), Gaps = 44/367 (11%)

Query: 667 LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRT 726
           LKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ 
Sbjct: 2   LKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQC 61

Query: 727 FAICSLK---------------------------------------NQSCAEESEMHFVR 747
           F + S +                                         S  EE E+H + 
Sbjct: 62  FGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLL 121

Query: 748 LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI 807
           ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF 
Sbjct: 122 IIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFH 181

Query: 808 VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 867
             DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +
Sbjct: 182 YSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNN 237

Query: 868 ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 927
           I+ALYV+T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGA
Sbjct: 238 IMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 297

Query: 928 ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTV 986
           EN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V
Sbjct: 298 ENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQDSV 357

Query: 987 IFGTVNG 993
           +FGTVNG
Sbjct: 358 LFGTVNG 364


>gi|312076588|ref|XP_003140928.1| xeroderma Pigmentosum Group E Complementing protein [Loa loa]
          Length = 516

 Score =  358 bits (919), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 212/499 (42%), Positives = 313/499 (62%), Gaps = 29/499 (5%)

Query: 5   NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
           NY+VTA+KPT VTH+ VG+F  P ELNL++AK  R+E+ L+TP+GL+P  + P++GRIAT
Sbjct: 4   NYIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIAT 63

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
           ++LFR  GE  D L I T +Y   +++W   +SEL TRA G + DR+GRP++ G I  + 
Sbjct: 64  IKLFRAPGEDVDSLLILTAKYHLAIIRW-TPTSELRTRASGHIVDRVGRPSETGMIATVH 122

Query: 125 PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
               ++   LYDGL KV+ + N+G+    FN+R ++L ++DI F+    +PT+  +YQD+
Sbjct: 123 SSGLMV-FRLYDGLLKVVQW-NEGKDLRGFNVRCDDLYIIDITFMSDPDRPTLAYIYQDD 180

Query: 185 KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS--- 241
            + RH+K   + ++DK+     W  +NL+  A ++I VP P  G LI G + I Y     
Sbjct: 181 -NGRHIKVVTLNIEDKELSSPLWKHDNLEGEASMVIGVPEPAGGCLIAGPDAISYHKGGD 239

Query: 242 -ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK--------- 288
            A  +  +P   +  +    Y  VD DG RYLL D AG L++L++   K +         
Sbjct: 240 DALRYAGVPGSRLHNTHPNCYAPVDRDGQRYLLADLAGNLYMLLLEFGKGQEQDESSTVS 299

Query: 289 VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGS-YVEVLERYVN 347
           V  +K+E LG T IA  + YLDN V +IGS +GDSQLI+L+ +P A G+ Y+ +L+ Y N
Sbjct: 300 VKDMKVESLGNTCIAECMCYLDNGVCFIGSRFGDSQLIRLSTEPRADGTGYISLLDSYTN 359

Query: 348 LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
           L PI D  V  +   GQ Q++TCSGAYKDG++RI+RNGIGI E ASVEL+GIK M++LR+
Sbjct: 360 LAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKNMFTLRT 417

Query: 408 STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN-QLVQVTS 466
             D  FD +L++SF S+T +L +N E ELE+T+I GF     TL+      +  ++QVT 
Sbjct: 418 R-DHEFDDYLILSFDSDTHVLLINGE-ELEDTQITGFVVDGATLWAGCLFQSTTILQVTH 475

Query: 467 GSVRLVSSTSRELRNEWKS 485
           G V L+   + ++   WK+
Sbjct: 476 GEVILIDGDNIQI---WKA 491


>gi|154303693|ref|XP_001552253.1| hypothetical protein BC1G_08731 [Botryotinia fuckeliana B05.10]
          Length = 1087

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 269/882 (30%), Positives = 454/882 (51%), Gaps = 76/882 (8%)

Query: 264  DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
            D   YLLGD  G L++L I  +   VTGL++  LG+ S  +++  L N V YI S   D+
Sbjct: 225  DERTYLLGDDYGFLYILTILVDGATVTGLQVVKLGQVSKPTSLENLGNGVFYIASHEADN 284

Query: 324  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSG 372
            Q+++++L+    G  V +L+   N+ PI+DF V+D+     E Q      GQ ++VT SG
Sbjct: 285  QVVQIDLESPEHG--VTLLQTLPNIAPILDFTVMDMGGREGETQLNEYSSGQARLVTGSG 342

Query: 373  AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
             ++ GSLR VR+G+G+++ A + E++GI+ +++L S    P DT LVVSF +ETR    +
Sbjct: 343  GFEGGSLRSVRSGVGLDDTAILAEMEGIRKVFALHSGPTLPNDT-LVVSFSTETRFFKFD 401

Query: 432  LEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 490
             + ++EE E ++   S ++TL  ++     ++QVT   V +   +     + W+ P G  
Sbjct: 402  TQGDIEEVETVKNLSSTSETLLTYNLDEGCILQVTQHEVSIYGKSPG---HRWQPPNGQI 458

Query: 491  VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-EYEISCLDINPIGENPSYSQI 549
            +  A+ N + +LL++ G  L  L I    L EV   +L + +++C+ +  +        I
Sbjct: 459  ITAASGNQNYILLSSNGRTLFTLSIQQN-LAEVAFQELGDDQVACIHVPQV-----MGDI 512

Query: 550  AAVGMWTDISVRIFSLPDLNLITKEHL---GGEIIPRSVLLCA-----FEGISYLLCALG 601
              VG+W   SV +  L  LN I  E L    G  IPR + L         G + L  ++ 
Sbjct: 513  GVVGLWKSGSVSLLDLATLNTIVSEDLRRADGASIPRDIALTQILPPELSGPT-LFVSME 571

Query: 602  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKL 660
            DG +L+F ++     L+ RK + LGTQ   L+     NTT +VFA  + P++IY S  + 
Sbjct: 572  DGIVLSFNVDKSDCSLSGRKSIVLGTQQAQLQILPRDNTTFNVFATCEHPSLIYGSEGRT 631

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 720
            +YS V  ++   +C  NS A+P S+ +A   EL +  ID+ ++ H+R++P+GE  RR+ +
Sbjct: 632  VYSAVTAEDAIAVCSLNSVAYPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAY 691

Query: 721  QEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTF-EFISTYPL----DTFEYGCSILSC 774
              + ++FAI ++K + +  +E      RL+D+  F E    Y L    +  E        
Sbjct: 692  SAKEKSFAIGAIKRELTKGQEVVTTSFRLVDEVVFGELGEPYYLPPNNEIIETVVRAELP 751

Query: 775  SFSDDSNVY--YCVGTAYVLPEENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAF 831
            +   D  +   + VGT++ L EE    +GR+L+F V  D    +IA    KG+   +   
Sbjct: 752  TRHGDGELVERFLVGTSF-LHEEEANVRGRLLIFGVNADRAPYMIASHNLKGSCRCIGVL 810

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            +GK++AA+N+ + +Y +      +  L+    +      + +    + I V D+MKSI+L
Sbjct: 811  DGKIVAALNKTVVMYDYEETSSTSATLKKLATYRCSTCPIDIDITDNIIAVADIMKSIAL 870

Query: 892  LIYKHEEGA------IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 945
            + Y    GA      +EE AR     + ++V  +D D YL  +++ NL  +++N EG T 
Sbjct: 871  VEYT--PGADGLPDKLEEVARHAQQVFSTSVAEVDTDTYLETDHDGNLILLKRNREGVTR 928

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 1005
            E++ R+EV  E +LGE VNR +  ++       D   IP    GT  G I + + +P + 
Sbjct: 929  EDKTRMEVTCEMNLGEMVNRVKRINVET---SKDALLIPRAFLGTTEGSIYLFSLIPPQN 985

Query: 1006 YLFLEKLQTNLRKV-----IKGV-------------GGLNHEQWRSF-NNEKKTVDAKNF 1046
               L +LQ+ L  +     I+G              G L+  ++RS+ +  ++T +   F
Sbjct: 986  QDLLMRLQSRLASLPSASSIRGSSDSTSPHQIELSPGNLDFNKYRSYISATRETSEPFRF 1045

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +DG+LIE FLDL     + +++ + V  E+L   VE L RLH
Sbjct: 1046 VDGELIERFLDLEVEVQEHVAEGLGVKAEDLRGMVEGLRRLH 1087



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 10/172 (5%)

Query: 681 FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-SCAE 739
           +P S+ +A   EL +  ID+ ++ H+R++P+GE  RR+ +  + ++FAI ++K + +  +
Sbjct: 5   YPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAYSAKEKSFAIGAIKRELTKGQ 64

Query: 740 ESEMHFVRLLDDQTF-EFISTYPL----DTFEYGCSILSCSFSDDSNVY--YCVGTAYVL 792
           E      RL+D+  F E    Y L    +  E        +   D  +   + VGT++ L
Sbjct: 65  EVVTTSFRLVDEVVFGELGEPYYLPPNNEIIETVVRAELPTRHGDGELVERFLVGTSF-L 123

Query: 793 PEENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            EE    +GR+L+F V  D    +IA    KG+   +   +GK++AA+N+ +
Sbjct: 124 HEEEANVRGRLLIFGVNADRAPYMIASHNLKGSCRCIGVLDGKIVAALNKTV 175


>gi|389744702|gb|EIM85884.1| hypothetical protein STEHIDRAFT_121882 [Stereum hirsutum FP-91666
            SS1]
          Length = 1255

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 330/1252 (26%), Positives = 551/1252 (44%), Gaps = 209/1252 (16%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
            V T H+P++V HS      SP +L+L++AK   +E++   P+GL+      +YGRI+ + 
Sbjct: 4    VTTFHQPSSVAHSLKCTL-SPDQLHLVVAKLNTLEVYSAQPEGLRHECTAELYGRISVIR 62

Query: 67   LFRPHGEAQDFLFIATERY-KFCVL--QWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
                  +  + L +      K  VL  +W +    L+T     + ++I RP++      +
Sbjct: 63   TITRKDDPDNILLMTDHPAPKLVVLSPKWISNRLSLVTVQTESLYEQIARPSEFVHNVFL 122

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP-------T 176
            DP   +   H Y G  K     N G L++  ++ + EL +L +  +    +         
Sbjct: 123  DPYGYVGLAHCYTGKAKAFTI-NDGLLEDFCDVLVPELNILSLTLVSSPEQAIDTPDPSA 181

Query: 177  IVVLYQDNKDARHVKTYEVALKDKDFVEGP---WSQNNLDNGADLLIPVP---------P 224
            + +L+ D++    +   ++ + + +    P   ++   + +    + PVP         P
Sbjct: 182  LAILHLDHRQNIQLLLRDLNISEYELSPSPSLMFTPATISSKVFEMAPVPENPPIIVNIP 241

Query: 225  PL---------------CGVLIIGEETIVY-------------------------CSANA 244
            PL                G+L+IG + ++                             + 
Sbjct: 242  PLQLPNPEAMEGTSDFNGGLLVIGGKKLLLFELTSKEFQRKHHKRLRKQESRRSTSGKDK 301

Query: 245  FKAIP---------IRP--SITKAYGRVDA------DGSRYLLGDHAGLLHLLVITHEKE 287
             KA P          +P  S+   +  V A      +G+RYL+GD  G L +L +    +
Sbjct: 302  AKAEPKEEKEGKSRSKPIASVAWPWSEVTACCQANDEGTRYLVGDAYGRLAMLSLDSLYD 361

Query: 288  KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP--------------- 332
            +  GL +  LGETS A+T++YLD+  +Y+GS +GDSQLIK++ QP               
Sbjct: 362  Q--GLILIPLGETSPATTLTYLDSQFLYVGSHFGDSQLIKIHRQPYGYTNTDTLPLLGIL 419

Query: 333  -----------------------------DAKGSYVEVLERYVNLGPIVDFCVVDLERQG 363
                                           KG Y+EV+  + N+ PI+D    D +  G
Sbjct: 420  PLEPTNLASSSGKGKAKAAAGRKSDGRILGMKGKYLEVVHSWRNIAPILDAVKADTDGSG 479

Query: 364  QGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFI 422
               +VTCSG    GSLR++RNG    E+A V+ L  + G+W+LRS   D   ++LV S  
Sbjct: 480  LPHIVTCSGGKSTGSLRVIRNGADFQEKAVVDGLDNMTGLWALRSHNSDKDHSYLVASDK 539

Query: 423  SETRILAMNLEDELEETEIEG---FCSQTQTLFCH---DAIYNQLVQVTSGSVRLVSSTS 476
             ET +      + L   E      F     TL      D   + ++QVTS  V+L+   +
Sbjct: 540  DETHLFRFEGPESLRRVESSSESYFRMNKPTLAVANVGDLDSSLILQVTSDKVQLLEFDA 599

Query: 477  R----ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-----ILTEVKHAQ 527
                  L + W    G  + +A+ + +QVLLA  GG +V L +        + T + +A+
Sbjct: 600  VLEIFHLSSHWSPESGKQITLASISPTQVLLALDGGTVVLLGLDKSRNMTVLSTRLYNAE 659

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL----PDLNLITKEHLGGEIIPR 583
            +   +SC   N +G         AV  W    + + SL    P L+ +T   +G     R
Sbjct: 660  IS-ALSCALPNALG---------AVSFWDSDRIELVSLGGSTPLLSTVTSREIGSSARAR 709

Query: 584  SVLLCAFEGIS---YLLCALGDGHLLNFLL---NMKTGELTDRKKVSLGTQPITLRTFSS 637
            S+LL  F+  S    LL  L +G ++ F++     KT EL DRK  ++G  P+ L     
Sbjct: 710  SILLHKFDSTSSEMQLLVGLTNGIMVAFVVASSETKTPELQDRKTFAMGNMPVLLVKVMV 769

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
               T V A+  R  V++    +L  S V L  +    P ++   P S+ +A   +L IG+
Sbjct: 770  DGHTSVLASGSRSVVVFWEKGRLKTSPVMLNNIFAGAPVDTPWSPSSVVLATGSKLIIGS 829

Query: 698  IDDIQKLHIRSI---PLG-EHPRRICHQEQSRTFAICSLKNQSC---AEESEMHFVRLLD 750
            +  + K+HI  +   P G ++PRRI +   +  FA+   + +      EE      +LLD
Sbjct: 830  VHGLDKMHIVPVTATPFGLDNPRRIVYDSHASVFAVACTRIEPAPVFGEEVSRGSFKLLD 889

Query: 751  DQTFEFISTYPL----DTFEYGCSILSCSFSDDSNV--YYCVGTAYVLPEENEPTKGRIL 804
            D TFE I   P     D  +   +I +    + +    +YCVG      +E EP+ G + 
Sbjct: 890  DITFELIGEVPFAENTDQMQEITAIHAFQHVEGNIAISHYCVGLVTYQLDEKEPSHGELH 949

Query: 805  VF----IVEDGKLQL----IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            +F       DG ++     + ++E  G VY+L +F G ++AAIN  +  +K  L   GT 
Sbjct: 950  IFSKGGTEPDGTVKADLLEVVKQEVSGCVYALASFEGYIVAAINSTVSFFK--LDTSGTE 1007

Query: 857  EL---QSECGHHGHILALYVQTRGDFIVVGDLMKSISLL--IYKHEEGAIEER----ARD 907
                 + E  H+  + +L V   G ++++GD + S+S+L  I   E G I E+    ARD
Sbjct: 1008 ATLVKKHEWNHNYLVTSLVVS--GSYLLIGDAISSVSVLQVIQVDENGEITEKLKTVARD 1065

Query: 908  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
            Y   W  +++    +  +GA ++ NLF+           ++  L+  G +HL + VN+F 
Sbjct: 1066 YGPLWPVSLQGWGKEGVIGANSDCNLFSFTLQ---PVTPQKTVLDRDGHFHLDDHVNKFL 1122

Query: 968  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
            HG++       D+      +F T +G IG++  +  E  L +  LQ NL  V+K V G  
Sbjct: 1123 HGTVHSSEKAEDLDIEARSLFFTASGRIGLVLDMGKELSLHMTALQRNLNGVVKDVSGTT 1182

Query: 1028 HEQWRSFNNEKKTVDAK----NFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            H++WR+  + +   DA      FLDGD IE FL+      DE+S  M   +E
Sbjct: 1183 HKRWRAPVSGRGPSDADAEAYGFLDGDFIEQFLN-----YDELSPEMKRIME 1229


>gi|392591958|gb|EIW81285.1| hypothetical protein CONPUDRAFT_56293 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1245

 Score =  355 bits (910), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 350/1258 (27%), Positives = 576/1258 (45%), Gaps = 192/1258 (15%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELN-LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            V T H  ++V  SC            L+IAK  +++I+ L P+GL+    + I+GR+  +
Sbjct: 4    VTTFHPSSSVLASCKWQLLDDARSEFLVIAKLNQLDIYSLQPEGLKYEDGLEIWGRVRAV 63

Query: 66   ELFRPHGEAQDFLFIATERYK--FCVLQWDAESS---EL-ITRAMGDVSDRIGRPTDNGQ 119
             +       +  L + T+  +     + +   +S   EL IT+ +  +++R GR  +   
Sbjct: 64   RVVPIKKSTEMHLLVLTDHPEPELVFITYTTHTSRKNELRITKKLS-LAERTGRIAEFFV 122

Query: 120  IGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP-TIV 178
              ++DP  +L  +  Y G  KV+  D+ G+    F++   EL +L +  +       T+ 
Sbjct: 123  DLLVDPTGQLAIVSTYAGKLKVVQLDD-GEYDSDFDVSTTELNLLSLATILPSPDDLTVA 181

Query: 179  VLYQDNKDARHVKTYEVALKDKDFVEGPWS----------QNNLDNGADLLIPVPPP--- 225
            +L+ D +    + T +++LK+      P +            ++D     LI VP     
Sbjct: 182  LLHVDYQQRLQLLTRDLSLKELQLSPLPSAVLPSVPLAAKHFSVDEEVPKLIHVPISEKD 241

Query: 226  ----LCGVLIIGEETI-VYCSANAFK-------------------------------AIP 249
                  GVL+IG   I +Y  A A K                                  
Sbjct: 242  EESFAGGVLVIGGSKIFLYDLAPAEKQRKQKEKQRRTQKKKASADSDEVMKDEGKEKKKK 301

Query: 250  IRPSI------TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIA 303
             R S+        A+ +VD  G R+LLGD  G L +L +  +    + L +  LGETS A
Sbjct: 302  ARASVEWPWAEVSAWCQVDDVGRRFLLGDKFGRLVMLCV--DISSNSSLTLIALGETSPA 359

Query: 304  STISYLDNAVVYIGSSYGDSQLIKLNLQP------------------------------- 332
            +T++YL N VVY+GS YGDSQL++++                                  
Sbjct: 360  TTLTYLSNQVVYLGSHYGDSQLLQISPSRLSDSDTPTLPVPGDIHTVTHIPHSSPGSDYD 419

Query: 333  --------DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRN 384
                    + +GS++  ++R+ N+ PI D  +VD +  GQ +VVTCSG    GS+R+VR+
Sbjct: 420  RRHRGFIVNGRGSHLTEVDRFQNIAPIYDAALVDPDNSGQYEVVTCSGGQNTGSIRLVRS 479

Query: 385  GIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443
            G    E A++  +  I  +W +RS   DP  T +V S   ET +  ++ +  +      G
Sbjct: 480  GADFQEAAAIGGIPNITNIWPVRSLYSDPIHTHIVASTPQETYVFRIDNKHTVSHVADSG 539

Query: 444  FCS-QTQTLFCHDA--------------IYNQLV-QVTS------------GSVRLVSST 475
            F + + +TL   +               + + LV QVTS            G    V   
Sbjct: 540  FVTGKKRTLVVQNLQKKVPKEAGQGLTYMDSSLVLQVTSDELVLLNLDKGLGEFTRVGDG 599

Query: 476  SRELRNEWKSPPGY---SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLE--- 529
              ++       PG+    +  A+ANASQV+L    G L  +   D     V +       
Sbjct: 600  VCKMGQLAGGKPGWIDREIVAASANASQVVLGLSFGRLAVVNFADNKFKLVGYRDFTNPS 659

Query: 530  ---YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL--PDLNLITKEHLGGEIIPRS 584
                EIS +   P  ++ S+S +AAV  W    V I SL  P   L     L    +PRS
Sbjct: 660  GGIAEISAVSCTPADQSKSFSPMAAVAFWQTHRVEIISLGSPFPTLCASVSLPS--LPRS 717

Query: 585  VLLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
            +L+  F G S     +LL    DG +  F+L  K   L ++K++ +G  P+T  T  +K 
Sbjct: 718  LLMHRFAGESANAPPHLLVGRADGVVATFVLKDKA--LVEQKQIPVGNLPVTFHTCKAKG 775

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
             T VFA   R +V++    +L +S + LKEV+     ++  +  SL +A    L IG + 
Sbjct: 776  RTAVFACGSRTSVLFWEKDRLRHSPLILKEVAAAASLHTHDYRSSLVLATSEGLVIGDVQ 835

Query: 700  DIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC---AEESEMHFVRLLDDQTFE 755
            +++KLHIRSI  G ++PRRI H    +  A+  +++        E     V+L +D T +
Sbjct: 836  NLEKLHIRSIHTGLDNPRRISHSPVHKALAVGCVRHTPVRVGEPEISRGSVQLYNDTTLD 895

Query: 756  FISTYPLDTFEYGCSI--LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILV----FIVE 809
             +    LD  E   +I  LS   ++++   + VGT  +   ENE + GR+L+    +   
Sbjct: 896  KLGQVVLDHDEEPMAIKALSVRVAEEAKDCFVVGTVIIDSLENESSSGRLLLVEPDYSRG 955

Query: 810  DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL---QSECGHHG 866
            +  + + A ++ KG VY++ A +G ++AA+N  + +Y  +  DD TR L   +    +H 
Sbjct: 956  ESFVAVSASEKVKGCVYAVAAVDGLVVAAVNSAVVIYS-IEADDHTRALSFVKKVEWNHN 1014

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
            +++A  V +RG+ ++VGD + S++LL Y  E GA++  ARDY+  W ++VE+LD+   +G
Sbjct: 1015 YVVANLV-SRGNLLLVGDAISSVTLLQY--ERGALQNVARDYSPLWPTSVEMLDERNVIG 1071

Query: 927  AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD---SDVGQI 983
            A+N+ NLF      +GA   ER  LE  G Y+ G+ VN+F  G +   L     SD+   
Sbjct: 1072 ADNDCNLFMFTLQ-DGA---ERKVLERNGHYYFGDMVNKFIPGEIYRALSSFEASDIEVE 1127

Query: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWRSFNNEKKTVD 1042
            P  +F T  G IGV+  +  E  L +  LQ NL        GG +H ++R+  N +   D
Sbjct: 1128 PKQLFFTTTGSIGVVIDMSDELSLHMSSLQRNLSTYFAAQPGGASHTKYRAPKNARGRSD 1187

Query: 1043 AKN----FLDGDLIESFL------DLSRTRMDEISKTMNVSV--EELCKRVEELTRLH 1088
            A N    FLDGDL+E FL      +  R  ++  ++   +S+  E + K +E L  +H
Sbjct: 1188 ADNSSFGFLDGDLLERFLLFGDDEEAVRKVLEGSTEAEQLSIAPERIIKVLERLQSMH 1245


>gi|302423344|ref|XP_003009502.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
 gi|261352648|gb|EEY15076.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
          Length = 1119

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 299/1165 (25%), Positives = 526/1165 (45%), Gaps = 128/1165 (10%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +Y+V  H+P+++    + +   P E  L+ AK  R+EI   T +GL  +    + G I  
Sbjct: 2    SYIVPIHRPSSI-RLAISSRLWPDEDVLVTAKVNRLEISRPTSEGLTLLSSSVVCGTITL 60

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
            L+  RP     D LF+ T+ + +   +WD    +L+T + + D+++   R   +    ++
Sbjct: 61   LQTLRPKASETDILFVGTDLFHYFTARWDPTQGKLVTEQVIQDIAEPHMREAQSQDKCLV 120

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQL-----KEAFNIRLEELQVLDIKFL-YGCAKPTI 177
            DP  R + +HL++G+  ++    +        K+   +RL EL +    F+      PTI
Sbjct: 121  DPAGRFVAMHLWEGVMNIMQLGTRKGANLRLDKDWAQVRLSELFMKASTFVPTETGHPTI 180

Query: 178  VVLYQ---DNKDARHVKTYEVALKDKDFVEG--PWSQNNL-----DNGADLLIPVP---- 223
              LYQ   D +DA H+  Y +       V    P     L     D  A  LIPV     
Sbjct: 181  AFLYQNSIDREDA-HLAVYRLMEDGNTNVSKFDPLKNRELELEIPDPFARTLIPVSIVES 239

Query: 224  --------------PPLCGVLIIGEETIVYC----SANAFKAIPIRPSITKAYGRVDADG 265
                            L G+++ GE  ++Y          KA+   P I  ++ + D   
Sbjct: 240  DVKRYHRRDTTNASAQLGGLIVAGETMLIYVDTLTKVKISKALD-EPRIFVSWAKYDV-- 296

Query: 266  SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
            +RYLL D  G LHLL +  +   VTGL ++ +G+TS AS + Y+ N ++++GS +GDSQL
Sbjct: 297  TRYLLADDYGNLHLLTLEVDGVIVTGLSLKTIGKTSRASCLVYMGNEILFLGSHHGDSQL 356

Query: 326  IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSGAY 374
              L+L        + +++   N+ PI+DF ++DL              GQ ++V   G +
Sbjct: 357  FTLDL----CAQTIRLIQTIPNIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAGCGVH 412

Query: 375  KDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
             +GSLR +R+ +G+ +   ++ +Q ++G++SL+S   +  DT LVVSFI+ETR+   +  
Sbjct: 413  HNGSLRSIRSSVGLEDIGILDGIQDVRGLFSLKSYGSEKVDT-LVVSFITETRVFKFDAY 471

Query: 434  DELEE-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
              +EE  + +G      TLF         +Q+T+ S  L+ S S    N W S  G S+ 
Sbjct: 472  GSVEELADFQGLTLDQPTLFAGSLANGHTLQITASSALLLDSESSVTINSWTSSNGGSIV 531

Query: 493  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAV 552
             A+ N      +TG  +                    +  +           ++  I A+
Sbjct: 532  NASVNEKA---STGRRY--------------------WGATAARSRAFTHRETFPDIGAI 568

Query: 553  GMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS-YLLCALGDGHLLNFLLN 611
            G W+  SV      +    T     G+   R+     F GIS +  C         +   
Sbjct: 569  GFWSTGSVCGHQPRN----TASTAWGKASNRTTTTSLFLGISLWSSCTRLSSQAPRYSFL 624

Query: 612  MKTGEL---TDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 668
            ++T +    T +K   L  +    R  + +         DR  +      +++YS    +
Sbjct: 625  LRTAKWFQSTSQKMTILSRRGKVSRWGAGRQA--CMCCRDRVPL-----GRIIYSAATAE 677

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFA 728
            +V+H+ PF+S  FPD++ +A +  + I  +D  ++ H+  + +GE  RR+ +    + F 
Sbjct: 678  DVTHIAPFDSEGFPDAIFLATDKNVRIANVDTERRTHVNPLHIGETVRRVAYSPALKAFG 737

Query: 729  ICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPL-----DTFEYGCSILSCSFSDDSNV- 782
            I +++ +   +E  +     L D+        P       + E   +++     D +   
Sbjct: 738  IGTIRKELLHDEEIVSSAFQLVDEIVLGKVGRPFALGGEASVELVEAVIRAELDDSTGQP 797

Query: 783  --YYCVGTAYVL-PEENEP--TKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLL 836
               + +GT+Y+  P+ N+    KGRILV  V+ D    LI   E KGA   L     KL+
Sbjct: 798  AERFIIGTSYLADPDVNDSGDVKGRILVLGVDSDRNPYLIVSHELKGACRCLGVMGDKLV 857

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-- 894
            A +++ + +Y ++     + +L+           + +   G+ I V DLM+S++L+ +  
Sbjct: 858  AGLSKTVVVYDYIEDSTTSGKLEKLTTFRPSTFPVDLDISGNMIGVADLMQSMTLVEFVP 917

Query: 895  --KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 952
                 +  + ERAR +   W +AV  L ++ +L A+   NL  + +  +  T+ ++ ++ 
Sbjct: 918  AKDGRKAKLIERARHFEYIWATAVCSLGEESWLEADAQGNLMILERQPDAPTEHDQKQMR 977

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
               E HLGE VN+ R   L +   +SD+  +P     TV+G + V+A++  E    L   
Sbjct: 978  TTSEMHLGEQVNKIR--PLQITATESDI-IVPKAFLATVDGSLYVLANISAEYQSILLPF 1034

Query: 1013 QTNLRKVIKGVG--------GLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRM 1063
            Q  L  +++ +G        G +  QWR F N K+   A   F+DG+LIE FLDL   R 
Sbjct: 1035 QERLAGIVRYLGQAAPEDNEGPSFSQWRGFRNAKRMAGAPFRFVDGELIERFLDLDELRQ 1094

Query: 1064 DEISKTMNVSVEELCKRVEELTRLH 1088
            + + + +  SVE +   VEEL R+H
Sbjct: 1095 EAVVEGLGPSVEAMRNMVEELRRMH 1119


>gi|449704103|gb|EMD44407.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
          Length = 1088

 Score =  349 bits (895), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 297/1119 (26%), Positives = 542/1119 (48%), Gaps = 76/1119 (6%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+ T    T++TH+ V     P E  L+I K T ++++ LT  GL  +        ++ +
Sbjct: 7    YLTTVAPSTSITHALVAKLNQPDEQYLVIVKNTIVDVYQLTTTGLDLIYTKQFPYSVSFV 66

Query: 66   ELFRPHGE-AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
              ++  G+ ++D+L   T   +  + Q + ++ EL      ++ DR+GR    G  G++ 
Sbjct: 67   SKYQSKGKNSKDYLIFVTNNQQLIIAQLN-DNKELSLVYSNNIEDRLGRTAFYGISGVVI 125

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ-LKEA-FNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
             +  L+       + K++P   + + L EA FN+R++E +V+ +  L    K  I + ++
Sbjct: 126  GNSYLLLHLYNHLI-KIVPLPREEENLPEAPFNLRIDEQRVVGLYCLQLDQKQVIAIHHE 184

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA-DLLIPVPPPLCGVLIIGEETIVYC- 240
               D + +  YE  +  K      +++   D    DL IP      G   I  + + +  
Sbjct: 185  IKNDVKVITFYEFNIDSKTL--SLYNKQIEDTSTIDLFIPYLGNE-GYFKINSQIVSFVP 241

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI----THEKE-KVTGLKIE 295
            +++   ++ +RP   + Y  +D    R LL D+ G +HL+ +     HE E     L+ +
Sbjct: 242  NSSQISSVSMRPIHLETYCFLDE--HRLLLSDNQGKMHLITLKENNNHEIELYYYPLEYQ 299

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             L   +I ST+ YLDN+V++ GS  GDS LIK+N     KG   E+LE + N GPI+D  
Sbjct: 300  AL---TIPSTVLYLDNSVLFWGSKGGDSHLIKIN----EKGC--EILETFENRGPILDMT 350

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDT 415
             +  E   +  ++ C   Y+ G+L+++ +G+GI+     E++GI  ++       +    
Sbjct: 351  AIHDEITNKDNLLMCCNTYQQGTLKLISSGVGIDIICQNEMKGITHLYQAEMGHKE---- 406

Query: 416  FLVVSFISETRILAMNLED---ELEETEIEGFCSQTQTLFCHDAIY------NQLVQVTS 466
            +L++S+   +++     E       E EI+GF  + +T+ C   I       +  VQVT 
Sbjct: 407  YLIISYGDGSKVFESQQEVNQLRFNEIEIKGFNRKEETI-CSGIIEIGEMKESCFVQVTR 465

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA 526
              + +  S   E   + +     S    +    + L  +    +        +L E K  
Sbjct: 466  EEINIFDSEQLEFIQQIRFNKFIS---HSCIYDEKLYISQSNEI-------NVLNENKEI 515

Query: 527  QLEY----EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 582
            +  Y    +IS   I   G       +  +  W   ++ I ++ + N      + G I  
Sbjct: 516  KQVYSGENDISAFTIGKEGT----EDVIGICYWDSNTMEIINMENGNKNHIREINGNIYG 571

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNF----LLNMKTGELTDRKKV-SLGTQPITLRTFSS 637
            +S+ +   +   Y++  +GDG +L +    L+ ++ GE+    KV  +G   I L+T   
Sbjct: 572  KSIEIINNQEGMYVVIGMGDGRVLVYQMEELMEIE-GEIPKNYKVLDIGLSGIELKTLEI 630

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
                ++    DRPT++     K+   +VN  E+  + PF      +SL +A +  + IG 
Sbjct: 631  NGMKYIMCLCDRPTLVSICKGKIKTLSVNCSEIVSIVPFKMKECMNSLVVATKENIIIGN 690

Query: 698  IDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES-EMHFVRLLDDQTFEF 756
            ID+IQ +H +S+ +G    RI   +Q     + S + +   E+  E H V+L+D +  E 
Sbjct: 691  IDEIQSIHTKSLSIGVFVSRIVVSKQENKALLLSSEIKELKEKRVETHSVKLIDFRKMEI 750

Query: 757  ISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLI 816
              ++ L   E+  SI       D N  + +GTA+  P E EP+ GRIL+  ++DG+L++I
Sbjct: 751  EDSHELKENEHALSIEQIVI--DENEMFVIGTAFAKPNEVEPSSGRILIVQIKDGRLEII 808

Query: 817  AEKETKGAVYSLNAFNGKLLA-AINQKIQLYKWM-LRDDGTRE--LQSECGHHGHILALY 872
             EK+  GAVYS+     K LA +I +K+ ++++  +  +G  E  LQ +   +  ++ LY
Sbjct: 809  FEKDVNGAVYSMKTLLKKYLAMSIEKKLVVFEYQRVITNGEFEVKLQEKGSCNVKLIGLY 868

Query: 873  VQTRGDFIVVGDLMKSISLLIYK---HEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
            V+T G+ I+VGDLMKSIS+  +    + +  + E +RD+ A++ +A+E +D+D YL +++
Sbjct: 869  VKTLGNKILVGDLMKSISVYSFDNNGNNKNCLTEVSRDFYASYTTAIEFVDEDCYLSSDS 928

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
            N N+     NS G  + ER RL      H+GE +N    GS+       +  Q   ++FG
Sbjct: 929  NSNILIFNTNSTG-NESERFRLNNCAHIHVGECINVMCKGSIAPTHSTYETVQKKCILFG 987

Query: 990  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWRSFNNEKKTVDAKNFLD 1048
             V G IG I  +P+E Y  L K+Q  +   +KG V     + W+   ++ K + + N +D
Sbjct: 988  GVTGYIGGICEIPNEIYDVLIKVQNQILLQMKGIVECTTPDNWKKVIDDWKRMPSSNIID 1047

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            G ++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 1048 GSIVESYLEMSKEKQCEIAHLSGVNEEQISDIIENMISL 1086


>gi|183232997|ref|XP_653855.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801778|gb|EAL48469.2| damaged DNA binding protein, putative [Entamoeba histolytica
            HM-1:IMSS]
          Length = 1088

 Score =  348 bits (894), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 297/1119 (26%), Positives = 542/1119 (48%), Gaps = 76/1119 (6%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+ T    T++TH+ V     P E  L+I K T ++++ LT  GL  +        ++ +
Sbjct: 7    YLTTVAPSTSITHALVAKLNQPDEQYLVIVKNTIVDVYQLTTTGLDLIYTKQFPYSVSFV 66

Query: 66   ELFRPHGE-AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
              ++  G+ ++D+L   T   +  + Q + ++ EL      ++ DR+GR    G  G++ 
Sbjct: 67   SKYQSKGKNSKDYLIFVTNNQQLIIAQLN-DNKELSLVYSNNIEDRLGRTAFYGISGVVI 125

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ-LKEA-FNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
             +  L+       + K++P   + + L EA FN+R++E +V+ +  L    K  I + ++
Sbjct: 126  GNSYLLLHLYNHLI-KIVPLPREEENLPEAPFNLRIDEQRVVGLYCLQLDQKQVIAIHHE 184

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA-DLLIPVPPPLCGVLIIGEETIVYC- 240
               D + +  YE  +  K      +++   D    DL IP      G   I  + + +  
Sbjct: 185  IKNDVKVITFYEFNIDSKTL--SLYNKQIEDTSTIDLFIPYLGNE-GYFKINSQIVSFVP 241

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVI----THEKE-KVTGLKIE 295
            +++   ++ +RP   + Y  +D    R LL D+ G +HL+ +     HE E     L+ +
Sbjct: 242  NSSQISSVSMRPIHLETYCFLDE--HRLLLSDNQGKMHLITLKENNNHEIELYYYPLEYQ 299

Query: 296  LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC 355
             L   +I ST+ YLDN+V++ GS  GDS LIK+N     KG   E+LE + N GPI+D  
Sbjct: 300  AL---TIPSTVLYLDNSVLFWGSKGGDSHLIKIN----EKGC--EILETFENRGPILDMT 350

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDT 415
             +  E   +  ++ C   Y+ G+L+++ +G+GI+     E++GI  ++       +    
Sbjct: 351  AIHDEITNKDNLLMCCNTYQQGTLKLISSGVGIDIICQNEMKGITHLYQAEMGHKE---- 406

Query: 416  FLVVSFISETRILAMNLED---ELEETEIEGFCSQTQTLFCHDAIY------NQLVQVTS 466
            +L++S+   +++     E       E EI+GF  + +T+ C   I       +  VQVT 
Sbjct: 407  YLIISYGDGSKVFESQQEVNQLRFNEIEIKGFNRKEETI-CSGIIEIGEMKESCFVQVTR 465

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA 526
              + +  S   E   + +     S    +    + L  +    +        +L E K  
Sbjct: 466  EEINIFDSEQLEFIQQIRFNKFIS---HSCIYDEKLYISQSNEI-------NVLNENKEI 515

Query: 527  QLEY----EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 582
            +  Y    +IS   I   G       +  +  W   ++ I ++ + N      + G I  
Sbjct: 516  KQVYSGENDISAFTIGKEGT----EDVIGICYWDSNTMEIINMENGNKNHIREINGNIYG 571

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNF----LLNMKTGELTDRKKV-SLGTQPITLRTFSS 637
            +S+ +   +   Y++  +GDG +L +    L+ ++ GE+    KV  +G   I L+T   
Sbjct: 572  KSIEIINNQEGMYVVIGMGDGRVLVYQMEELMEIE-GEIPKNYKVLDIGLSGIELKTLEI 630

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
                ++    DRPT++     K+   +VN  E+  + PF      +SL +A +  + IG 
Sbjct: 631  NGMKYIMCLCDRPTLVSICKGKIKTLSVNCSEIVSIVPFKMKECMNSLVVATKENIIIGN 690

Query: 698  IDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES-EMHFVRLLDDQTFEF 756
            ID+IQ +H +S+ +G    RI   +Q     + S + +   E+  E H V+L+D +  E 
Sbjct: 691  IDEIQSIHTKSLSIGVFVSRIVVSKQENKALLLSSEIKELKEKRVETHSVKLIDFRKMEI 750

Query: 757  ISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLI 816
              ++ L   E+  SI       D N  + +GTA+  P E EP+ GRIL+  ++DG+L++I
Sbjct: 751  EDSHELKENEHALSIEQIVI--DENEMFVIGTAFAKPNEVEPSSGRILIVQIKDGRLEII 808

Query: 817  AEKETKGAVYSLNAFNGKLLA-AINQKIQLYKWM-LRDDGTRE--LQSECGHHGHILALY 872
             EK+  GAVYS+     K LA +I +K+ ++++  +  +G  E  LQ +   +  ++ LY
Sbjct: 809  FEKDVNGAVYSMKTLLKKYLAMSIEKKLVVFEYQRVITNGEFEVKLQEKGSCNVKLIGLY 868

Query: 873  VQTRGDFIVVGDLMKSISLLIYK---HEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
            V+T G+ I+VGDLMKSIS+  +    + +  + E +RD+ A++ +A+E +D+D YL +++
Sbjct: 869  VKTLGNKILVGDLMKSISVYSFDNNGNNKNCLTEVSRDFYASYTTAIEFVDEDCYLSSDS 928

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
            N N+     NS G  + ER RL      H+GE +N    GS+       +  Q   ++FG
Sbjct: 929  NSNILIFNTNSTG-NESERFRLNNCAHIHVGECINVMCKGSIAPTHSTYETVQKKCILFG 987

Query: 990  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWRSFNNEKKTVDAKNFLD 1048
             V G IG I  +P+E Y  L K+Q  +   +KG V     + W+   ++ K + + N +D
Sbjct: 988  GVTGYIGGICEIPNEIYDVLIKVQNQILLQMKGIVECTTPDDWKKVIDDWKRMPSSNIID 1047

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            G ++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 1048 GSIVESYLEMSKEKQCEIAHLSGVNEEQISGIIENMISL 1086


>gi|407044103|gb|EKE42371.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
          Length = 1088

 Score =  347 bits (891), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 294/1120 (26%), Positives = 539/1120 (48%), Gaps = 78/1120 (6%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+ T    T++TH+ V     P E  L+I K T ++++ LT  GL  +        ++ +
Sbjct: 7    YLTTVAPSTSITHALVAKLNRPDEQYLVIVKNTIVDVYQLTTTGLDLIYTKQFPYNVSFV 66

Query: 66   ELFRPHGE-AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
              ++  G  ++D+L   T   +  + Q + ++ EL      ++ DR+GR    G  G++ 
Sbjct: 67   SKYQSKGRNSKDYLIFVTNNQQLIIAQLN-DNKELSLVYSNNIEDRLGRTAFYGISGVVI 125

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ-LKEA-FNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
             +  L+       + K++P   + + L EA +N+R++E +V+ +  L    K  I + ++
Sbjct: 126  GNSYLLLHLYNHLI-KIVPLPREEENLPEAPYNLRIDEQRVVGLYCLQLDQKQVIAIHHE 184

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA-DLLIPVPPPLCGVLIIGEETIVYC- 240
               D + +  YE  +  K      +++   D    DL IP      G   I  + + +  
Sbjct: 185  IKNDVKVITFYEFNIDSKTL--SLYNKQIEDTSTIDLFIPYLGNE-GYFKINSQIVSFVP 241

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELL--- 297
            +++   ++ +RP   + Y  +D    R LL D+ G +HL+ +    +     +IEL    
Sbjct: 242  NSSQISSVSMRPIHLETYCFLDE--HRLLLSDNQGKMHLITLKENNKH----EIELYYYP 295

Query: 298  ---GETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
                  +I ST+ YLDN+V++ GS  GDS LIK+N     KG   E+LE + N GPI+D 
Sbjct: 296  LEYQALTIPSTVLYLDNSVLFWGSKGGDSHLIKIN----EKGC--EILETFENRGPILDM 349

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
              +  E   +  ++ C   Y+ G+L+++ +G+GI+     E++GI  ++       +   
Sbjct: 350  TAIHDEITNKDNLLMCCNTYQQGTLKLISSGVGIDIICQNEMKGITHLYQAEMGHKE--- 406

Query: 415  TFLVVSFISETRILAMNLED---ELEETEIEGFCSQTQTLFCHDAIY------NQLVQVT 465
             +L++S+   +++     E       E EI+GF  + +T+ C   I       +  VQVT
Sbjct: 407  -YLIISYGDGSKVFESQQEVNQLRFNEIEIKGFNRKEETI-CSGIIEIGEMKESCFVQVT 464

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKH 525
               + +  S   EL  + +     S    +    + L  +    +        +L E K 
Sbjct: 465  REEINIFDSEQLELIQQIRLNKFIS---HSCIYDEKLYISQSNEI-------NVLNENKE 514

Query: 526  AQLEY----EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 581
             +  Y    +IS   I   G       +  +  W   ++ I  + + N      + G I 
Sbjct: 515  IKQVYSGENDISAFTIGKEGT----EDVIGICYWDSNTMEIIKMENGNKNHIREINGNIY 570

Query: 582  PRSVLLCAFEGISYLLCALGDGHLLNF----LLNMKTGELTDRKKV-SLGTQPITLRTFS 636
             +S+ +   +   Y++  +GDG +L +    L+ ++ GE+    KV  +G   I L+T  
Sbjct: 571  GKSIEIINNQEGMYVVIGMGDGRVLVYQMEELMEIE-GEIPKNYKVLDIGLSGIELKTLE 629

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
                 ++    DRPT++     K+   +VN  E+  + PF      +SL +A +  + IG
Sbjct: 630  INGMKYIMCLCDRPTLVSICKGKIKTLSVNCSEIVSIVPFKMKECMNSLVVATKENIIIG 689

Query: 697  TIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES-EMHFVRLLDDQTFE 755
             ID+IQ +H +S+ +G    RI   +Q     + S + +   E+  E H V+L+D +  E
Sbjct: 690  NIDEIQSIHTKSLSIGVFVSRIVVSKQENKALLLSSEIKELKEKRVETHSVKLIDFRKME 749

Query: 756  FISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQL 815
               ++ L   E+  SI       D N  + +GTA+  P E EP+ GRIL+  ++DG+L++
Sbjct: 750  IEDSHELKENEHALSIEQIVI--DENEMFVIGTAFAKPNEVEPSSGRILIVQIKDGRLEI 807

Query: 816  IAEKETKGAVYSLNAFNGKLLA-AINQKIQLYKWM-LRDDGTRE--LQSECGHHGHILAL 871
            + EK+  GAVYS+     K LA +I +K+ ++++  +  +G  E  LQ +   +  ++ L
Sbjct: 808  VFEKDVNGAVYSMKTLLKKYLAISIEKKLVVFEYQRVITNGEFEVKLQEKGSCNVKLIGL 867

Query: 872  YVQTRGDFIVVGDLMKSISLLIYK---HEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
            YV+T G+ I+VGDLMKSIS+  +    + +  + E +RD+ A++ +A+E +D+D YL ++
Sbjct: 868  YVKTLGNKILVGDLMKSISVYSFDNNGNNKNCLTEVSRDFYASYTTAIEFVDEDCYLSSD 927

Query: 929  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
            +N N+     NS G  + ER RL      H+GE +N    GS+       +  Q   ++F
Sbjct: 928  SNSNILIFNTNSTG-NESERFRLNNCAHIHVGECINVMCKGSIAPTHSTYETVQKKCILF 986

Query: 989  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWRSFNNEKKTVDAKNFL 1047
            G V G IG I  +P+E Y  L K+Q  +   +KG V     + W+   ++ K + + N +
Sbjct: 987  GGVTGYIGGICEIPNEIYDILIKVQNQILLQMKGIVECTTPDDWKKVIDDWKRMPSSNII 1046

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            DG ++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 1047 DGSIVESYLEMSKEKQCEIAHLSGVNEEKISDIIENMISL 1086


>gi|336369683|gb|EGN98024.1| hypothetical protein SERLA73DRAFT_109335 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336382464|gb|EGO23614.1| hypothetical protein SERLADRAFT_449959 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1257

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 327/1271 (25%), Positives = 559/1271 (43%), Gaps = 206/1271 (16%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELN-LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            V T H  ++V  S   + T   + + L++A   RI I  + P GL+      ++GR+  +
Sbjct: 4    VNTFHPSSSVLDSLRCHLTGKTDTDYLVVANLNRIHISSVQPDGLRHECRFEVWGRVGAI 63

Query: 66   ELFRPHGEAQDFLFIATERY--KFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQI 120
            +      +    + + T+    +   L + A  S   +LI      + +R  R  +    
Sbjct: 64   KAVPSENKQCMTILVLTDHPDPELIFLSYQASQSGGLDLIYTKHLSLLERGARFAEFFNN 123

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP---TI 177
             ++DP  RL  +  Y G  K++    +G     F++ + EL +L ++F+   ++P   T+
Sbjct: 124  VLVDPTGRLAVVSPYTGKLKIVLITPEGTYDTDFDVSIAELNLLALEFI--SSEPDLYTL 181

Query: 178  VVLYQDNKDARHVKTYEVALKDKDFV--------EGPWSQNNLDNG--ADLLIPVPPPL- 226
             +++ D+     + + +++L +              P S  +   G     L+ +PP + 
Sbjct: 182  AIMHIDHLKRLQLLSRDISLDEYQLSPTPSPALPSTPLSAKSFPIGDKPPSLVYIPPFID 241

Query: 227  ------CGVLIIGEETIVYCSANA------------------------------------ 244
                   G+L+IG   I++   ++                                    
Sbjct: 242  DDEDFIGGMLVIGGTKILFYDTSSRESQGNRKQKQRRMDKGKDSTVKELAKAKQKEDERE 301

Query: 245  FKAIPIRPSITKAYGRV-------DADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELL 297
            ++    R S+   +  +       D  G  +L+GD  G L +L I   +   T L +  L
Sbjct: 302  WRKKKARASVDWPWSEITAWCAVGDELGRSFLIGDKYGRLAMLSIGINEG--TTLTLVAL 359

Query: 298  GETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP------------------------- 332
            GETS A+T++YL + V+Y+GS +GDSQL+++N  P                         
Sbjct: 360  GETSSATTLTYLTSQVLYVGSHFGDSQLLRINTTPVQSLESPTLPVPSDINTTTSSSLAA 419

Query: 333  ----------------DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 376
                            + +GS++ V+E Y N+ PI+D  +VD++  GQ  VVTCSG    
Sbjct: 420  KGKMEESSDRSGGCIINGRGSFLSVIESYKNIAPIIDAALVDVDNSGQHAVVTCSGGQNT 479

Query: 377  GSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM---NL 432
            GS+ IVRNG      A++E +  +  +W LR++  D  DT + VS    T IL+    N+
Sbjct: 480  GSISIVRNGADFKAMANMEGIVDVTNIWPLRANYYDTVDTHVAVSTFKATHILSFDGRNV 539

Query: 433  EDELEETEIEGFCSQTQTLFCHDAI---------------YNQLVQVTSGSVRLVSSTSR 477
               +     +GF + + TL   + +                + +VQ+TS  + L+     
Sbjct: 540  ASHVNPVS-KGFITTSPTLVIANVLGRPKAPGQATNSYVDSSLVVQITSRGIALLEYAVE 598

Query: 478  -----ELRNEWKSP-------PGYS---VNVATANASQVLLATGGGHLVYLEIGDGILTE 522
                  + + W          PG+    +  A+AN SQ +LA   G +V L + D    +
Sbjct: 599  LGEYARVGDIWTPAKLSSTNGPGWENREIVAASANGSQFVLALNSGRIVLLNLDDRNCFD 658

Query: 523  VKH-------AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL---PDLNLIT 572
              +       +    EIS +   P+  +  +S    V  W+   + I S         I 
Sbjct: 659  CLNWRDLDGSSNYPTEISAISCVPLNPSKKFSMYIVVSFWSSNHIEILSANAASHFASIC 718

Query: 573  KEHLGGEI--------IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
            K  +   +          RS +    E   YL+  LGDG ++++    K  EL  +K  S
Sbjct: 719  KTPVLPSLPRSLLLFNFTRSDIPKQTEYNQYLIVGLGDGSVVSY--EFKKEELHGQKIFS 776

Query: 625  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
            +G  P+TL     +    VFA   R ++++   ++L +S + L EVS +   N+  F  S
Sbjct: 777  VGNVPVTLHPCDVEGRRTVFACGSRTSILFWDKERLHHSPLMLNEVSAVSRLNTTVFDSS 836

Query: 685  LAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAI-CSLKNQSCAEESE 742
            + +A    L IG++ ++ KL+IRSIPLG ++PRRI H    R +A+ C     +  +++E
Sbjct: 837  VILATSTGLVIGSVKNLDKLYIRSIPLGYDNPRRILHVPSLRAYAVGCISITPTRIDKAE 896

Query: 743  M--HFVRLLDDQTFEFISTYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 798
                 ++L D  TF  +  +  D  E      ++S +       Y C GT Y   +E EP
Sbjct: 897  YTSSSMQLFDHTTFARLGQFRCDPNEEITALGVVSVTLERSIGTYICAGT-YKYVDEVEP 955

Query: 799  TKGRILVFIVEDG-----KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 853
            ++GR+LVF  EDG     K+ +    E +G VY++ + NG ++AAIN  + +Y+  + D 
Sbjct: 956  SQGRLLVFDAEDGSLLREKITMAVSLEVRGCVYAVGSVNGMIIAAINSSVVVYRPEI-DA 1014

Query: 854  GTRELQ----SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
             T+ L     +E  H  + L   +  RGD I+VGD + SIS L  +  E  I+  ARDY 
Sbjct: 1015 STQLLALHKITEWNH--NYLVTNLVCRGDKILVGDAINSISFL--RMVESQIQCLARDYG 1070

Query: 910  ANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHG 969
            + W   VE+LD    +GA +++NLFT          E R  LE  G Y++G+ VN+F  G
Sbjct: 1071 SLWPVCVEMLDQSSIIGANSDYNLFTFALQET----ELRKSLERDGSYYIGDMVNKFIPG 1126

Query: 970  SLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
            +L       D+   P  +F T  G IGVI  +  E  L +  LQ N+   +    G+ H 
Sbjct: 1127 ALTAHDVSVDMPLEPKQLFFTSTGCIGVIVDMGDELSLHMTALQRNMSTYLSQTKGVTHT 1186

Query: 1030 QWRSFNNEKKTVDAK----NFLDGDLIESFLDL------SRTRMDEI--SKTMNVSVEEL 1077
            ++R+  N     DA+     FLDGD +E F+         ++ MD    ++ + +SV+ +
Sbjct: 1187 KFRAPKNAYGRSDAEATSFGFLDGDFLEKFMQFLNDPGPLKSIMDGQGEAERLTISVDRI 1246

Query: 1078 CKRVEELTRLH 1088
             + +E L  +H
Sbjct: 1247 HRVLERLQSMH 1257


>gi|395330962|gb|EJF63344.1| hypothetical protein DICSQDRAFT_153890 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1263

 Score =  341 bits (874), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 326/1251 (26%), Positives = 534/1251 (42%), Gaps = 228/1251 (18%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELN-LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            V T H  ++V+ S     T+   L  L+IAK  ++E+H L P+GL+    + ++GR+  L
Sbjct: 4    VGTFHPSSSVSRSLKCTLTADPSLEFLVIAKTDKLEVHSLQPEGLKRECVLDMWGRVVGL 63

Query: 66   ELFRPHGEAQDFLFIATERY--KFCVLQWDAES--SELITRAMGDVSDRIGRPTDNGQIG 121
            +      E +  +   T+    +  +L +D +   + L       ++DR  R  +     
Sbjct: 64   QAVPAEEEGRSHILAMTDHPDPELILLSYDVKDGVASLTPAGHHSLADRAARQAEFVTDF 123

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCA--KPTIVV 179
             +DP   +     Y G  KV+   + G+L  AF++ L EL +L   FL+     + ++ +
Sbjct: 124  QVDPSGTVAVASCYTGKLKVVTVSD-GKLDTAFDVSLPELNLLAFTFLHTGQEDRYSLAL 182

Query: 180  LYQDNKD-----ARHVKTYE-------------VALKDKDF---------VEGPWSQNNL 212
            L+ +++       R V   E               L DK F         V  P  + + 
Sbjct: 183  LHLNHRRQIQLLCRDVDLAEFELSPVHSNILLTATLSDKTFPSLESPLMLVPIPQHETDA 242

Query: 213  DNGADLLIPVPPPLCGVLIIGEETIVY--------------------------------- 239
            D G D     P    GVLI+G   I++                                 
Sbjct: 243  DEGDD---DAPAHRGGVLILGGRKILFYEHSTEEQQETRKEKHRRLSKRLASEDEAKAQE 299

Query: 240  ----CSANAFKAIPIRPSI------TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKV 289
                      + I  R S+        A+  VDA+  R LLGD  G L ++     K   
Sbjct: 300  AKKKEKERESRRIKPRASVKWPWAAVTAWTAVDAERRRVLLGDAYGRLAMIAFDDGK--- 356

Query: 290  TGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP----------------- 332
              L +  LGE S  + +SYL + V+Y+GS YGDSQL++++  P                 
Sbjct: 357  MCLNLIPLGEASSPTCLSYLSSQVLYLGSHYGDSQLLRIHPTPFANATVDTLPIPRGVSS 416

Query: 333  ----------------------------------DAKGSYVEVLERYVNLGPIVDFCVVD 358
                                              + +G+++EVL+ + N+ PI+D  + D
Sbjct: 417  VPPSSLAGSGKGKAKATSGVGDAESGSAREGRVVNTQGTFLEVLQNFDNIAPIMDAALAD 476

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFL 417
            ++  GQ QV+T SG    GSLR++R      EQA ++ L G+  +W +++ + +P  T L
Sbjct: 477  IDGSGQPQVITSSGGRNTGSLRVIRTEADFQEQARLDGLIGVTDIWPVKTHSAEPIHTHL 536

Query: 418  VVSFISETRILAMNLEDELE--ETEIEGFCSQTQTL-----------------FCHDAIY 458
            VVS + ET + A   +D +   +  + GF +   T                  + H ++ 
Sbjct: 537  VVSTLRETHVFAFEGKDAIAHLDPSVAGFTTHAPTFVLGNIPRRVVSASGTSSYEHSSL- 595

Query: 459  NQLVQVTSGSVRLVSSTS--------------RELRNEWKSPPGYSVNVATANASQVLLA 504
              +VQ+TS  ++LV                  +++  E+    G  +  A  + SQ ++ 
Sbjct: 596  --VVQITSEGIQLVEYEPTLFAFGKVGPGWYPKQVGGEYA---GREIVAAAMSPSQFVVG 650

Query: 505  TGGGHLVYLEIGDGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 563
              GG L    +G     ++   +    EI  +   P   + +Y+   AV  W    V + 
Sbjct: 651  LSGGRLALFNLGQKDTVQLLTTRNFPDEICAISCQPYDSSKNYASAIAVSFWGSNKVAVL 710

Query: 564  SL-PDLNLITKEHLGGEIIPRSVLLCAF---------EGISYLLCALGDGHLLNFLLNMK 613
            +L P   L T        +PR VLL  F         +   +LL  L DG L+ + L  +
Sbjct: 711  ALDPSSPLATVCDTALPTLPRVVLLHNFGTGGRPKDPDFHPHLLVGLADGTLVTYAL--R 768

Query: 614  TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 673
             G+L DRK+  LG  P +L        T VFA+  R +V++   +++  S V++K++   
Sbjct: 769  DGKLHDRKQSGLGNAPASLSVCDVDGRTVVFASGARSSVLFWDRQRVRPSPVSVKDMIKG 828

Query: 674  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSL 732
               N+AAFP  LAIA    L IGT+  + K+ IR+IPLG + PRR+ +      F +   
Sbjct: 829  VTLNTAAFPSCLAIATSSALLIGTVRGLDKMQIRTIPLGLDSPRRLGYHAGQGVFGVACT 888

Query: 733  KNQSCA----EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC-SFSDDSNVYYCVG 787
            +         EE    F +LLD  +F+ +  +     E   S+L+  +    ++  + +G
Sbjct: 889  RTTPDRIGDYEEVTGSF-KLLDAHSFQQLHNFLCQADEEPSSVLTLPAHGSGASPAFALG 947

Query: 788  TAYVLPEENEPTKGRILVFIVEDGK---------LQLIAEKETKGAVYSLNAFNGKLL-A 837
            T Y+ PEE EP+KGRIL+F V   +         L  +A     G VY+L   +  L+ A
Sbjct: 948  TVYIRPEEREPSKGRILLFSVSSTEGARGANVRSLHTLASVNVGGCVYALANLSENLIVA 1007

Query: 838  AINQKIQLYKWMLRDDG-----TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
            AIN  + L+K    + G     + E  +E  H+  +  + V   G+ I+VGD + S+S+L
Sbjct: 1008 AINTSVVLFKSTENEAGESTPLSLEKVTEWNHNHFVTNVVVD--GERILVGDAISSVSVL 1065

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 952
             +      +E  ARDY   W  A+E   + + +GA  + NLF+    S       R  LE
Sbjct: 1066 KWNERLERLESIARDYGPLWPIAIEGTGNGL-IGANADCNLFSFSLQSV----PHRTYLE 1120

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV----IFGTVNGVIGVIASLPHEQYLF 1008
              G YHL +  N+F  G+L      +DV +   V    +F T  G IG I  +     L 
Sbjct: 1121 KDGVYHLNDVTNKFVRGALT----STDVAEDQVVKASHVFFTSTGCIGAILDMNDVTSLH 1176

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFL 1056
            +  LQ N+ K + G GG NH + R+ +  +   DA+    FLDGD +E +L
Sbjct: 1177 MTALQRNMAKTLTGPGGDNHTKLRAPSTPRGHTDAEASYGFLDGDFLEQYL 1227


>gi|403415203|emb|CCM01903.1| predicted protein [Fibroporia radiculosa]
          Length = 1267

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 278/967 (28%), Positives = 450/967 (46%), Gaps = 157/967 (16%)

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYI 316
            A+   D  G R+++GD  G L +L      +   GL +  LGETS A +++YL + V+Y+
Sbjct: 323  AWCPADDQGRRFIIGDTFGRLAMLAF----DDANGLLLIPLGETSSAVSLTYLSSQVLYL 378

Query: 317  GSSYGDSQLIKLNLQP----DA-------------------------------------- 334
            GS +G+SQL++++  P    DA                                      
Sbjct: 379  GSHFGESQLLRIHQSPFTERDAETLPIPDHVKSISAVSLPGGKGKERLDDSLEPSKKERG 438

Query: 335  ------KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI 388
                  KG +VEVL+ Y N+ PI+D  +VDL+  GQ Q++ CSG    G+L+I+R G   
Sbjct: 439  GQVVLGKGKFVEVLDSYENIAPIMDAVMVDLDGSGQPQIIACSGGRNSGALKIIRTGADF 498

Query: 389  NEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI--EGFC 445
             EQA +  ++ +  +W +RS  +D  D+ L+ + + ET + +++  + +   +    GF 
Sbjct: 499  QEQAVIRGIENVTDIWPIRSHYEDIIDSHLIATTLHETLVFSLDGRNAVTHMDPSDHGFI 558

Query: 446  SQTQTL----------------FCHDAIYNQLV-QVTSGSVRLVSSTSR-----ELRNEW 483
            +++ TL                     + + LV QV+   VR++   +       + + W
Sbjct: 559  TRSPTLAVGNIPRRATTQNGGRVVSSYVDSSLVLQVSQEKVRVIEHDAALGLFVPVGDGW 618

Query: 484  -KSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQL------EYEISCL 535
              +  G ++  A  N+SQ +L   GG L+ L +G+   + E+K+           EIS +
Sbjct: 619  DATKEGRTIVAAAINSSQFVLGLSGGRLILLNLGENEQIQELKYRDFGDRTYGMLEISAV 678

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPD----LNLITK-------------EHLGG 578
              +P      Y+    V  W    + I SL      L  I +              + G 
Sbjct: 679  SCSPFDTTKKYATCIGVSFWGTNRIAILSLESATSYLTTICESDPLPSLPRSLLLHNFGQ 738

Query: 579  EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +  P+       +   ++L  L DG L++F    K  +L D+K  +LG  P+ L   +  
Sbjct: 739  DHNPKGA-----DYHPHVLAGLVDGTLVSFSFREK--DLKDKKTFALGDVPVALAKSTVD 791

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                +FA+  R +V+Y   ++L  S V +K+       +S+AFP  L +A    L IG +
Sbjct: 792  GKPAIFASGSRASVLYWDRQRLHQSPVMIKDAVRGASISSSAFPSCLILATRSTLMIGNV 851

Query: 699  DDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLK---NQSCAEESEMHFVRLLDDQTF 754
              + K+ I S+ +G ++PRRI H    R FA+  ++   N+    +     ++LLDD TF
Sbjct: 852  RGVDKMQINSVRMGLDNPRRIAHHPTLRVFAVACIQTKPNRIGEPQETTSSLKLLDDTTF 911

Query: 755  EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--- 811
              I+++  ++ E   S+L+ S SD S+  +CVGT    P E EP+ GRIL+F +  G   
Sbjct: 912  NRIASFACESDEEVTSVLTLSSSDVSSARFCVGTVQFKPGETEPSSGRILLFSLNTGPES 971

Query: 812  KLQLIAEKETKGAVYSLNAFNGKLLAAIN------------------QKIQLYKWMLRDD 853
              QL++     G VY L +  G + AA+N                   K+ L+K    ++
Sbjct: 972  SFQLVSSTPVSGCVYQLVSIQGMIAAAVNTSVRTAYVFIAFDPNMTIHKVILFKPEKLNN 1031

Query: 854  GTRELQ--SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
             T  L   SE  H+  +  L V   G  ++VGD + SIS +  K ++  +E  ARDY+  
Sbjct: 1032 STVVLTKVSEWNHNYSVTGLVVH--GCMLIVGDAISSISFV--KVDDTTLESIARDYSPL 1087

Query: 912  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 971
            W  +VE +D D  +GA ++ NLFT      G     R  LE  G Y+LG+ VN+F  GSL
Sbjct: 1088 WPVSVEAMDGDGVIGANSDCNLFTFALQRSG----HRSTLERNGSYYLGDMVNKFLRGSL 1143

Query: 972  VMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
               +  S+   I P  +F T  G IGVI  +  +  L +  LQ N+ K I G GG++H  
Sbjct: 1144 T-NIDISERKSIEPKHLFFTSTGRIGVILEMNDKISLHMTGLQRNMGKRIIGPGGVHHAT 1202

Query: 1031 WRSFNNEKKTVDAK---NFLDGDLIESFL------DLSRTRMDEISKTMNVSVEELCKRV 1081
            +R+  N K   DA+    FLDGD +E +L      DL +  MD    TM+ S  ++   +
Sbjct: 1203 FRAPANSKGHSDAEAAFGFLDGDFLEQYLGYADYTDLLQGDMDAEQVTMSHS--QIQDVL 1260

Query: 1082 EELTRLH 1088
            E+L  LH
Sbjct: 1261 EQLQSLH 1267



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 13/230 (5%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
           V T H P++V  S   N T  QE +LI+AK  R+E+  L   GL     + I+GRI +L+
Sbjct: 4   VATFHHPSSVVQSLKCNLTQDQE-HLIVAKVNRLEVFSLRSSGLHFECSLEIWGRIVSLK 62

Query: 67  LFRPHGEAQDFLFIATER-----YKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
                   Q  L + T+          ++  D  ++ L+++   D+ DR  RP +     
Sbjct: 63  AIPSKDSKQSNLLVLTDHPDPKLIPLTLVLDDTGNASLLSKETIDLHDRYARPAEFVTDV 122

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP-TIVVL 180
            +DP   +  +  Y G  KVI F N+ +     +I + EL +L +  LY      T+ +L
Sbjct: 123 YVDPTGEVAVVSCYTGRLKVIEFKNRERTGIPLDISIPELYILAMTLLYTTKDLYTLSIL 182

Query: 181 YQDNKDARHVKTYEVALKDKD------FVEGPWSQNNLDNGADLLIPVPP 224
           + D++    + + ++ L++              S N   +    LIPV P
Sbjct: 183 HYDHQGRLQLLSRDLDLRELSASPSTLLFSTILSSNVPSDSTPFLIPVLP 232


>gi|213407660|ref|XP_002174601.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
            yFS275]
 gi|212002648|gb|EEB08308.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1078

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 287/1126 (25%), Positives = 525/1126 (46%), Gaps = 91/1126 (8%)

Query: 5    NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
            +YV + HK ++V  + V      +  N+++ K  RIEI+      L  +    ++ ++ +
Sbjct: 2    SYVSSIHKFSSVKDA-VSCRLDGKNWNVVVLKTNRIEIYGFEGDKLVQLGSSTVFSKVRS 60

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITR--AMGDVSDRIGRPTDNGQIGI 122
            ++ FRP    +D L +    + +  + WD +  + I    A    S        N ++ +
Sbjct: 61   IKSFRPPLSTKDHLIVTVSPFSYFTVTWDPDKKQFINEVTAQPPASTFFLNKQRNPKL-L 119

Query: 123  IDPDCRLIGLHLYDGLFKVIPFDNK-----------GQLKEAFNIRLEELQVLDIKFLYG 171
            IDP  R+I  H + GL   IP   +             +++ F +R+ EL VLDI FLY 
Sbjct: 120  IDPSNRVICSHAFQGLLTFIPITQRITKKRQKDVPSQSVQDNFTVRIMELDVLDIVFLYT 179

Query: 172  CAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVL 230
               PT+ VLY+D++   H+K Y V L +K+  E   ++ ++++ G      +     GV 
Sbjct: 180  SKTPTLAVLYKDSRSVIHLKAYTVNLAEKELNEDESFACHDIEEGR----LIAHYDGGVF 235

Query: 231  IIGEETIVYCSANAFKAIPIRPSITKAYG----------RVDADGSRYLLGDHAGLLHLL 280
            + GE  + Y S     +  +      AY            V  +  +Y++ D +G +++ 
Sbjct: 236  VFGEVYVYYVSREKKSSKMLVSYPVTAYSAVFQSFQNGTEVCINERKYIVSDESGAVYMF 295

Query: 281  VITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVE 340
             I +       + +E +GE  IAS I  L N  +++GS +GDS+L +   +P   GS VE
Sbjct: 296  NIGNN----FNVTLEKIGEAPIASCIVALPNDQIFLGSHFGDSKLYRFQNKPGVAGS-VE 350

Query: 341  VLE--RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 398
            +LE   + NL PI DFC+      G   +V C  AY +GSLR +++GI I++   +E+  
Sbjct: 351  LLEVQSFDNLAPISDFCID--HGNGGSFMVACCNAYNEGSLREMKSGIDISDYGVIEMPN 408

Query: 399  IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFC-HDAI 457
            +  ++S++  +      +L V  ISET +  ++   E++   ++  C +  T+F    + 
Sbjct: 409  VCSLYSVQLQSS--VTKYLFVGSISETSVFEISQSGEMDL--VDSLCLEEPTIFVGATSD 464

Query: 458  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 517
             + L  V   SV L     ++L + W +  G ++  A    + V L+     +V+L    
Sbjct: 465  SSCLYHVARSSVCLFDG--KQL-SYWFADGG-AITCAAVYDNAVCLSMTNNQIVFLHK-- 518

Query: 518  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG 577
              L  V   Q++ +++ L         + ++   VG+W    + +    +     +E L 
Sbjct: 519  --LQVVSKLQVDSDVTALSF------LNDARTICVGLWNQ-KLLLLDSDNTTCTVRETLE 569

Query: 578  GEIIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
                 +S++     GI+   L  +   G L+ F ++  T  +  R    L   P+ + TF
Sbjct: 570  VNEKAQSLVCVKLAGIASVALYMSTESGKLITFDIDPVTKGIKQRLTYPLTAVPLNMNTF 629

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
             + N   +    + P  +Y  N+ L ++ +   ++  +        P +   A    L +
Sbjct: 630  QTPNGPVLITLGEHPYAVYGENQHLSFAYIGNSDIVCLSHLQHPGIPANTVYATRNALKL 689

Query: 696  GTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE-MHFVRLLDDQTF 754
              ++ +QKLHIR IP+   PRRI   ++        L+++  ++ S  M  + +    T+
Sbjct: 690  SNVNMLQKLHIRRIPVAGIPRRIAATKEHYFVLSVDLQDKLASQGSSIMSSLHVFKKLTY 749

Query: 755  EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF-IVEDGKL 813
            E +  +  + +E    I+ C+ +   N    VGT +  P+ +EP  GR++VF + E  KL
Sbjct: 750  ETVLQHEFEDYE----IVECALTLPDNERVVVGTGFNYPDRDEPDGGRLIVFRLDEQEKL 805

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW---MLRDDGTRELQSECGHHGHILA 870
               A  +T+GA++S+    GKLL  +N  +  +++    LR  G+    + C      L 
Sbjct: 806  VTEAVYKTQGAIFSVEYQEGKLLVGMNAVLCTFRYENKTLRVVGSTRTPTYC------LN 859

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
            +   ++ D +VVGD+MKS++L  Y  E+   EE ARD+ A W+++V+ L + ++     +
Sbjct: 860  IAASSK-DIVVVGDMMKSLTL--YNTEKDTAEEVARDFGALWVTSVQPLSETLFFCTTAD 916

Query: 931  FNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
                T+  +++     ER +L     Y LG+ VNR R G  V+  P   V   P ++  T
Sbjct: 917  GEAVTMLWDTKAPQSVERKKLRWKSCYRLGDMVNRTRRGCFVLSSPSRLVK--PELMCVT 974

Query: 991  VNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW--RSFNNEKKTVDAKNFLD 1048
            V G I +I        L L+ +Q N  + +  +GGL+  +W  R F   + +   K+F+D
Sbjct: 975  VEGGILLIGDASQHADLLLQ-IQHNFLEAVPPLGGLDFYKWHERLF-PARASAANKDFID 1032

Query: 1049 GDLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 1088
            GDL+ES  DL  + + +I       +++N+SV +L   + +L RLH
Sbjct: 1033 GDLLESIEDLPESTLQKIVQGTNGGQSLNISVPDLLGIISDLKRLH 1078


>gi|384490729|gb|EIE81951.1| hypothetical protein RO3G_06656 [Rhizopus delemar RA 99-880]
          Length = 967

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 289/1087 (26%), Positives = 485/1087 (44%), Gaps = 174/1087 (16%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            M+  + V T   PT VT +  G FT P E NLI+                       IYG
Sbjct: 1    MNTCHVVTTISPPTAVTSAARGCFTQPAEENLIVC----------------------IYG 38

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             I  L++ +   ++   LFI T    + ++ +  ++  ++T   G ++    R TD   +
Sbjct: 39   TIRNLQVIQLPDKSTCSLFILTVHQCYTIITYSLKTQSIVTEFSGQLNITNARETDQQVV 98

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPF--------------DNKGQLKEAFNIRLEELQVLDI 166
              +D    +I +  + G    IPF              D K        IR  E   + +
Sbjct: 99   VTVDKTSEMIFVSAFTGYVIAIPFGKPAPGAKLTSKNRDTKASRFMQIPIRTNEFDFISV 158

Query: 167  KFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPL 226
              L       + VL  + +D + +KT++   + KD +E   S   ++     L+PVP PL
Sbjct: 159  AALQQGGY--LSVLVGEMEDLKTIKTFKYRDEYKDLLERNKSTIKVEASTHALVPVPEPL 216

Query: 227  CGVLIIGEETIVYCS--ANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITH 284
             G+L+IGE  I Y     N  + + I P+   A+  +  + +RYLLGD  G L++  I  
Sbjct: 217  GGLLVIGEYIITYFDPLTNTNRELSIDPARVTAWEFMKDESNRYLLGDEEGYLYVFSIET 276

Query: 285  EKEKVTGLKIELLGET----------------SIASTISYLDNAVVYIGSSYGDSQLIKL 328
               KV  L    +G+                 S  S I  L N + YIGS++GDS LI+L
Sbjct: 277  SHNKVVNLSSTFIGQVPSFNQNIESKANHPQVSRPSCIVDLGNLMFYIGSTHGDSCLIQL 336

Query: 329  NLQPDAKGSY-VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIG 387
             ++   K  Y V+VL  Y  LGPIVDFC+ D  +QG+  +  C+G  KD S+RIV NGIG
Sbjct: 337  -IKGQEKSKYTVKVLSTYSCLGPIVDFCLYDYNKQGKQTMACCAGVEKDASIRIVENGIG 395

Query: 388  INEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS- 446
             +++ +++   +  MW+L  S D   D+ L+ + + +T +L  + ++ELE T+   + + 
Sbjct: 396  FSKKYALDFPLVYAMWTL--SLDGDRDSLLISTAL-DTVLLKPSDQEELEVTQHTSYSAL 452

Query: 447  -QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR-ELRNEWKSPPGYSVNVATANASQVLLA 504
              +Q     D   + +VQ TS  VR++++    +L  EWK P G S+ +A    S  ++ 
Sbjct: 453  DTSQMTLAADMFNSFIVQATSSFVRMMTNDEYGQLIGEWKPPTGTSIAIAKIKDSHCVVC 512

Query: 505  TGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVRIF 563
              G  ++YLE+ +    E    QL+   SC+ I+   EN + Y  + A    ++ SV   
Sbjct: 513  CEGDMIIYLEMTNKGFIEKSKRQLK-NASCISISTRKENETLYDYVVAGTCGSNPSVVFL 571

Query: 564  SLPDLNLITK-EHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE--LTDR 620
             LPDL ++ + + +     P  +L+   E + YL+  LGDG + ++ + + + +  L   
Sbjct: 572  QLPDLEVVLEHKDMPSTTGPNDLLVVTMEKVLYLMVLLGDGQMFSYHMEVGSEDVILESE 631

Query: 621  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 680
             ++ +GT    +  +       VF A  RPTVI S ++ L   +VNL             
Sbjct: 632  TEIMVGTYCTAMYPYQHGQEKRVFVAGQRPTVISSFHQTLFVYSVNL------------- 678

Query: 681  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE 740
               +  +  E  L I  I DI+ L + S      P +   +   +               
Sbjct: 679  ---TYELPGEMPLRIEYISDIKALAVASCTNVHDPNKNIIERTGK--------------- 720

Query: 741  SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTK 800
                 VRLLD QTF+                                             
Sbjct: 721  -----VRLLDAQTFQ--------------------------------------------- 730

Query: 801  GRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ-LYKWMLRDDGTRELQ 859
                 F +E+ + +LI   +  G VY + +    ++AA++ KI  LY +         ++
Sbjct: 731  ----AFTIENSRCELIDAVDMPGVVYRMESIKNTIIAAVDGKIYGLYNFKPDLLKGERIE 786

Query: 860  SECGHHGHILALYVQT-RGDFIVVGDLMKSISLLIYKHEEGAIE--ERARDYNANWMSAV 916
             +   H +++AL + T   D ++VGDLM+S+SLL  + +E +++    A D    WM+AV
Sbjct: 787  FKFLLHNNVVALDMDTDNNDTLLVGDLMESMSLLKVEKDEESLKLSLEAVDNKQVWMTAV 846

Query: 917  EILDDDIYLGAENNFNLFTVRK---NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            + +++++ +GA++  NLFT+ K     EG T     +LE+ G YHLG  VNRFR    ++
Sbjct: 847  KFVNENVLIGADDRHNLFTMIKPEIRQEGKT----CKLELEGGYHLGTLVNRFRKD--IL 900

Query: 974  RLPDSDVGQIPTV-------IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 1026
            R  ++    I ++        F TVNG IG + ++  E + F + +Q  +  ++   G L
Sbjct: 901  RDVENASDNIDSISKYESEFTFATVNGSIGTVKTISRESFEFFKGIQEGILNILPNNGNL 960

Query: 1027 NHEQWRS 1033
            +H  W S
Sbjct: 961  DHGLWLS 967


>gi|167390599|ref|XP_001739420.1| DNA damage-binding protein [Entamoeba dispar SAW760]
 gi|165896898|gb|EDR24200.1| DNA damage-binding protein, putative [Entamoeba dispar SAW760]
          Length = 1088

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 299/1125 (26%), Positives = 544/1125 (48%), Gaps = 88/1125 (7%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+ T    T++TH+ V     P E  L+I K T + ++ LT  GL  +        ++ +
Sbjct: 7    YLTTVAPSTSITHALVAKLNQPDEQYLVIVKNTIVNVYQLTTTGLDLVYTKQFPYSVSFI 66

Query: 66   ELFRPHGE-AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
              ++  G  ++D+L   T   +  + Q + ++ EL      ++ DR+GR    G  G++ 
Sbjct: 67   TKYQSKGRNSKDYLIFVTNNQQLVIAQLN-DNKELSLVYSNNIEDRLGRTAFYGISGVVI 125

Query: 125  PDCRLIGLHLYDGLFKVIPFDNKGQ-LKEA-FNIRLEELQVLDIKFLYGCAKPTIVVLYQ 182
             +  L+       + K+IP   + + L EA FN+R++E +V+ +  L    K  I + ++
Sbjct: 126  SNSHLLLHLYNHLI-KIIPLPREEENLPEAPFNLRIDEQRVVGLYCLQLDQKQVIGIHHE 184

Query: 183  DNKDARHVKTYEVALKDKDFVEGPWSQNNLD-NGADLLIPVPPPLCGVLIIGEETIVYC- 240
               D + +  YE  ++ K      +++   D +  DL IP      G   I  +T+ +  
Sbjct: 185  IKNDIKVITFYEFNIESKTL--NLYNKQIEDTSNIDLFIPYLGNE-GYFKINSQTVSFVP 241

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELL--- 297
            ++N   ++ +RP   + Y  +D    R LL D+ G +HL+ +    +     +IEL    
Sbjct: 242  NSNQISSVSMRPIHLETYCFLDE--KRLLLSDNKGKMHLITLKENNKH----EIELYYYP 295

Query: 298  ---GETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDF 354
                  +I STI YLDN+V++ GS  GDS LIK+N +        E+LE + N GPI+D 
Sbjct: 296  LEYQALTIPSTILYLDNSVLFWGSKGGDSHLIKINEKR------CEILETFENRGPILDM 349

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
              +  E   +  ++ C   Y+ G+L+++ +G+GI+     E++GI  ++ +     +   
Sbjct: 350  TAIHDEITNKDDLLMCCNTYQQGTLKLISSGVGIDIICQNEMKGITHLYQVEMGNKE--- 406

Query: 415  TFLVVSFISETRILAMNLED---ELEETEIEGFCSQTQTLFCHDAIYNQ------LVQVT 465
             +L++S+   +++     E+   +  E EI+GF  + +T+ C   I          VQVT
Sbjct: 407  -YLIISYSDNSKVFESQQENNQLQFNEIEIKGFNRKEETI-CSGIIEIGEMKEICFVQVT 464

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYS--------VNVATANASQVLLATGGGHLVYLEIGD 517
               V +  S   +L  + +     S        + ++ +N   VL               
Sbjct: 465  REEVNIFDSEQLKLIQQIRVNKFISHSCIYDEKLYISQSNEINVLNEK------------ 512

Query: 518  GILTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
                E+KH    E +IS   I   G       +  +  W    + I  L + N      +
Sbjct: 513  ---KEIKHIYSGENDISAFTIGKEGT----EDVIGICYWDSNKMEIIKLENGNKNHIREI 565

Query: 577  GGEIIPRSVLLCAFEGISYLLCALGDGHLLNF----LLNMKTGELTDRKKV-SLGTQPIT 631
             G I  +S+ +   +   Y++  +GDG +L +    L+ ++ GE+T   KV  +G   I 
Sbjct: 566  NGNIYGKSIEIINNKEGMYIVIGMGDGRVLVYQMEELMEIE-GEITKNYKVLDIGLSGIE 624

Query: 632  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
            L+T       ++    DRPT++     K+   +VN  E+  + PF      +SL +A + 
Sbjct: 625  LKTLEINGMKYIMCLCDRPTLVSIYKGKIKTLSVNCSEIVSIVPFKMKECMNSLIVATKE 684

Query: 692  ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES-EMHFVRLLD 750
             + IG I++IQ +H +S+ +G    RI   +Q     + S + +   E+  E H ++L+D
Sbjct: 685  NIIIGNIEEIQSIHTKSLSIGVFISRIVISKQENKALLLSSEIKELKEKRIESHSIKLID 744

Query: 751  DQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED 810
             +  E   ++ L   E+  SI       D    + +GTA+  P E EP+ GRIL+  ++D
Sbjct: 745  FRKMEIEDSHELKENEHALSIEEIVV--DEKEMFVIGTAFAKPNEVEPSSGRILIVQIKD 802

Query: 811  GKLQLIAEKETKGAVYSLNAFNGKLLA-AINQKIQLYKWM-LRDDGTRE--LQSECGHHG 866
            GKL+++ EK+  GAVYS+     K LA +I +K+ ++++  +  +G  E  LQ +   + 
Sbjct: 803  GKLEIVFEKDVNGAVYSIKTLLKKYLAMSIEKKLVIFEYQRIITNGEFEVKLQEKGSCNV 862

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIY---KHEEGAIEERARDYNANWMSAVEILDDDI 923
             ++ LYV+T G+ I+VGDLMKSIS+  +    + +  + E +RD+ A++ +A+E +D++ 
Sbjct: 863  KLIGLYVKTMGNKILVGDLMKSISVYSFDNNGNNKNCLNEVSRDFYASYTTAIEFVDENC 922

Query: 924  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            YL +++N NL     NS G  + ER RL      H+GE +N    GS+       +  Q 
Sbjct: 923  YLSSDSNSNLLVFNTNSTG-NESERFRLNNCAHIHVGECINVMCKGSIAPTHSTYETIQK 981

Query: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWRSFNNEKKTVD 1042
              ++FG V G IG I  +P+E Y  L K+Q  +   +KG V     ++W+   ++ K + 
Sbjct: 982  KCILFGGVTGYIGGICEIPNEIYDILIKVQNQILLQMKGIVECTTPDEWKKVIDDWKRMP 1041

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            + N +DG+++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 1042 SSNIIDGNIVESYLEMSKEKQCEIAHLSGVNEEQINDIIENMISL 1086


>gi|119191318|ref|XP_001246265.1| hypothetical protein CIMG_00036 [Coccidioides immitis RS]
          Length = 1072

 Score =  338 bits (867), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 244/825 (29%), Positives = 414/825 (50%), Gaps = 86/825 (10%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           Y+   H  ++V ++    F +P E  L++AK  R+E +L TP GL       IYG+I+ L
Sbjct: 3   YITPLHHASSVDNAIKLQFMNPGEDCLVVAKSNRLEFYLPTPDGLSLQHAKAIYGKISVL 62

Query: 66  E-LFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGII 123
           + + R H  A D LF+ T+RY +  L WD  + +L T +   D++D   R   +G    +
Sbjct: 63  QKVPRSHSSATDLLFVGTDRYAYFTLSWDPSTCQLHTEQKYLDIADPSLRDNQSGDRSWV 122

Query: 124 DPDCRLIGLHLYDGLFKVIPF-------------------DNKGQLKEAFNIRLEELQVL 164
           DP  + + + +Y+G+  VIP                    + +  L E    R+EEL V 
Sbjct: 123 DPSGKFLTMEIYEGIISVIPIAQEPLKRPSPSAGRSSGTSEQREYLGEPLQTRIEELIVR 182

Query: 165 DIKFLY--GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEG-PWSQ------------ 209
              FL+      P I +LY++ +    +K     L+D  +  G P  +            
Sbjct: 183 STAFLHHDPTKPPRIAILYENTQGKVKLK-----LRDLIYSRGIPGGEASAAEFRDVDDL 237

Query: 210 -NNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP----SITKAYGRVDAD 264
            ++L+ GAD+L+PVP PL GVLI+GE+ I Y      + I  RP    +I  A+ ++D  
Sbjct: 238 YDDLELGADILVPVPLPLGGVLILGEKFIKYIDTVKNETI-TRPLEHNTIFVAWEQLD-- 294

Query: 265 GSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
             R+LL D  G L   ++I +    V   K+ LLGETS AS + +L   VV++GS  GDS
Sbjct: 295 NQRWLLADDYGRLFFFMLILNSANAVQSWKVGLLGETSRASALVHLGGGVVFLGSHQGDS 354

Query: 324 QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGA 373
            +I++      +GS+ E+++   N+GPI+DF V+DL  +G          Q ++VT SGA
Sbjct: 355 HVIRIT-----EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGA 408

Query: 374 YKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNL 432
           ++DGSLR VR+G+G+ +   +  ++ I  +W L +   + F   L++SF+ E+R+   + 
Sbjct: 409 FRDGSLRSVRSGVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFSP 468

Query: 433 EDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
           + E+EE +   G      T+   +    +++QVT    R+    SR    EW +     +
Sbjct: 469 DGEVEEKDDFLGLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKI 528

Query: 492 NVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEIS--CLDINPIGENPSYSQ 548
             A++N   ++L  GG  L+  +IGD I ++  K  + + ++S   L  +PI       Q
Sbjct: 529 TAASSNDRHLVLMVGGQKLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSPI-------Q 581

Query: 549 IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLL-CAF-EGISYLLCALGDGH 604
              +       V I  L  LN+   E LG  G+ +PRSVL+ C F +    L  A+ DG 
Sbjct: 582 ACILCFPQSAEVTIIDLTGLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVAMADGS 641

Query: 605 LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYS 663
           + +F LN+    L+D  K+ LG++    +     +  + +FA  D P++IY+S  +++YS
Sbjct: 642 VFSFSLNVANYSLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASEDRIVYS 701

Query: 664 NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 723
            VN  + + +C FN+ A+P ++A+A   ++ I  +D  +   I+++ + E  RR  +   
Sbjct: 702 AVNSDKATRICHFNAEAYPGAIAVATPDDIKIALVDAERTTQIQTLMINETVRRTSYSST 761

Query: 724 SRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTYPLDTFE 766
            R F + +++       EE + HF+ L D+  F  +S + L+  E
Sbjct: 762 ERAFGLGTIQRTLVQNVEEVKSHFI-LADEIMFRQLSVFDLNPNE 805



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA----IEERARDYNANW 912
            E++ E  +      + +   G+ I V DLMKSISL+ Y   EG     ++E AR Y   W
Sbjct: 835  EIEKEASYRTSTAPVDISVTGNIIAVADLMKSISLVEYHAGEGGQPDTLKEVARHYQTLW 894

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
             +A   + ++ +L A+   NL  + +++ G T+++R R++V  E  LGE VNR  H   +
Sbjct: 895  TTAAAPVAENEFLVADAEGNLVVLNRDTTGVTEDDRRRMQVTSELRLGEMVNRI-HPMDL 953

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
               P+S V  IP     TV+G I +   +       L +LQ+ L   +   G +   ++R
Sbjct: 954  QTSPESPV--IPKAFLATVDGSIYLFGLISPSAQDTLMRLQSALADFVASPGEIPFNKYR 1011

Query: 1033 SFNNE-KKTVDAKNFLDGDLIESFL----DLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            +F +  ++  +   F+DG+LIE FL    D+    +  +     V+V E+   +E L R+
Sbjct: 1012 AFKSSVRQAEEPFRFVDGELIEQFLTFPPDIQEAALARMDGGGRVNVIEIKGMIEGLKRM 1071

Query: 1088 H 1088
            H
Sbjct: 1072 H 1072


>gi|166158025|ref|NP_001107422.1| damage-specific DNA binding protein 1, 127kDa [Xenopus (Silurana)
            tropicalis]
 gi|157422734|gb|AAI53474.1| Zgc:63840 protein [Danio rerio]
 gi|163916541|gb|AAI57552.1| LOC100135265 protein [Xenopus (Silurana) tropicalis]
          Length = 306

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 172/309 (55%), Positives = 220/309 (71%), Gaps = 15/309 (4%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W  
Sbjct: 2    VCPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT- 60

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
                 +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG+ EE ARD+N 
Sbjct: 61   ---AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNP 117

Query: 911  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 970
            NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGS
Sbjct: 118  NWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFSHGS 177

Query: 971  LVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
            LV++ L +S      +V+FGTVNG+IG++ SL    Y  L  LQ  L KVIK VG + H 
Sbjct: 178  LVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHS 237

Query: 1030 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCK 1079
             WRSF+ E+KT  A  F+DGDLIESFLDL + +M E+  T+ +          +V+E+ K
Sbjct: 238  FWRSFHTERKTEQATGFIDGDLIESFLDLGQAKMQEVVSTLQIDDGSGMKREATVDEVIK 297

Query: 1080 RVEELTRLH 1088
             VEELTR+H
Sbjct: 298  IVEELTRIH 306


>gi|392566425|gb|EIW59601.1| hypothetical protein TRAVEDRAFT_167065 [Trametes versicolor FP-101664
            SS1]
          Length = 1263

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 272/916 (29%), Positives = 418/916 (45%), Gaps = 133/916 (14%)

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYI 316
            A+  VDA   R LLGD  G L +L   ++    T L    LGETS A++++YL + V+Y+
Sbjct: 329  AWSAVDARCRRVLLGDAFGRLAMLAFNNDAVAFTLLP---LGETSPATSLTYLSSQVLYV 385

Query: 317  GSSYGDSQLIKLNLQPDA------------------------------------------ 334
            GS +GDSQ ++++  P A                                          
Sbjct: 386  GSHFGDSQQLRIHPAPIANASVDTLPIPKGVSTVSPSALASSPSKGKGRSMDLDDGLVRE 445

Query: 335  ------KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI 388
                  KG+Y+EVL+ + N+ PI+D  + D++  GQ QV+T SGA   GSLR++R     
Sbjct: 446  GRVIQTKGTYLEVLQTHDNVAPIMDAVLADIDGSGQPQVITASGARNTGSLRVIRTEADF 505

Query: 389  NEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE--IEGFC 445
             EQA ++ L GI  +W +R   +D   T LVVS   ET +L+   +D +   E  + GF 
Sbjct: 506  QEQAKLDGLPGITDIWPVRPRFNDATHTHLVVSTSRETLVLSFAGQDTITHVEPSVAGFA 565

Query: 446  SQTQTLFCHDAIYNQ-----------------LVQVTSGSVRLVS-----STSRELRNEW 483
            +   T    +    Q                 + Q+TS  VRLV      +        W
Sbjct: 566  THVPTYAIGNVPRRQTTTSGGRTTSSYVDSPLVAQITSEGVRLVEYDPTLNGFTPFGAGW 625

Query: 484  -------KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCL 535
                    S  G  +  A  + SQ ++   GG L  L +G +  L  VK      EI  +
Sbjct: 626  YPKKSGDASMAGRDIVAAAMSPSQFVVGLSGGRLALLNLGANDALQVVKTRDFPDEICAI 685

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSL--PDLNLITKEHLGGEIIPRSVLLCAFEGI 593
               P     +Y+   AV  W+   + + SL  P   L     +    +PRS+LL  F   
Sbjct: 686  SCTPFDPTKNYATHIAVSFWSSNKIAVLSLDSPASYLGPICEVSLPTLPRSILLHNFGAG 745

Query: 594  S---------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
            +         +LL  L DG+++ F L  + GEL D K  SLG  P +L   +    T V 
Sbjct: 746  ARPKDADFRPHLLAGLADGNVMTFAL--RDGELHDSKASSLGNAPASLSLCAVDGRTVVL 803

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
            A   R  V+Y   +++  S V +K ++     N+AAFP  LAIA    L IG +  + K+
Sbjct: 804  AGGARSNVLYWDRQRIRPSPVGVKYMARGATLNTAAFPSCLAIATSSALLIGNVRGVDKM 863

Query: 705  HIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSCA---EESEMHFVRLLDDQTFEFISTY 760
             IR+IPLG ++PR++ +    + F +   +         E      +LLD  +F+ +  +
Sbjct: 864  QIRTIPLGMDNPRKMAYHAGQQVFGVACARTAPGRVGDNEDITGSFKLLDAHSFQQLHHF 923

Query: 761  PLDTFEYGCSILSCSFSDD-SNVYYCVGTAYVLPEENEPTKGRILVFIV--EDG--KLQL 815
              D  E   S+L+       S+  +C+GTA + PEE EP+ GRIL+F +  E+G   L  
Sbjct: 924  QCDPDEEPASVLALPGEGSASSPAFCLGTAVIRPEEREPSNGRILLFSLSSENGVRSLTT 983

Query: 816  IAEKETKGAVYSLNAFN-GKLLAAINQKIQLYKWMLRD-------DGTRELQSECGHHGH 867
            +A  + +G VY+L   + G + AAIN  + LYK  +R+       D   +  +E  H+  
Sbjct: 984  VASHKVRGCVYALQHVSEGVIAAAINTSVLLYK--IREGNLGEGFDRVLDKAAEWNHNHF 1041

Query: 868  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 927
            + +L     G F++VGD + S+S+L    +   +E  ARDY   W  A+E   +   +GA
Sbjct: 1042 VTSLVWD--GQFLLVGDAISSVSVLRVADDATKLESVARDYAPLWPVAIESTGNGGVIGA 1099

Query: 928  ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV- 986
             ++ NLF+           +R  LE  G YH+ + VN+   G+    L  +DV Q   V 
Sbjct: 1100 NSDCNLFSFALQR----GPQRNGLEKNGVYHIDDVVNKLIKGA----LSSADVSQDQAVK 1151

Query: 987  ---IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
               +F T  G IG I  +     L +  LQ N+ K + G GG+NH + R+    +   DA
Sbjct: 1152 AGHVFFTSTGRIGAILDMNDTMSLHMTALQRNMAKSLIGPGGVNHTKRRAPATPRGHTDA 1211

Query: 1044 K---NFLDGDLIESFL 1056
            +    FLDGD +E+FL
Sbjct: 1212 EASYGFLDGDFLETFL 1227



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 9/201 (4%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQEL--NLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
           VV    P++     +  F +P     +L++AK  RIE++ L P GL+      ++GRI  
Sbjct: 3   VVGTFHPSSSVSRSLKCFLTPDTALEHLVVAKTNRIEVYSLQPGGLKLECTTDMWGRIVG 62

Query: 65  LELFRPHGEAQDFLFIATE--RYKFCVLQWDAES--SELITRAMGDVSDRIGRPTDNGQI 120
           L+      + Q  L + T+    K  ++ +  E   + L +     + D+  RP +    
Sbjct: 63  LQAVPARTQGQSNLLVMTDLPDAKLVLMTYSTEGGVAALTSGTSHSLMDQAARPAEFVTD 122

Query: 121 GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP--TIV 178
             +DP  +++    Y G  KV+  ++ G+L +AF++ L E+ +L   FLY   +   T+ 
Sbjct: 123 FQVDPTGQVVIASCYAGKLKVVRIED-GELGQAFDVSLPEINLLAFTFLYTDDEDRFTLA 181

Query: 179 VLYQDNKDARHVKTYEVALKD 199
           +L+ ++K    + + +V L+D
Sbjct: 182 LLHLNHKRQIQLLSRDVLLED 202


>gi|390603312|gb|EIN12704.1| hypothetical protein PUNSTDRAFT_97523 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1268

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 273/925 (29%), Positives = 417/925 (45%), Gaps = 141/925 (15%)

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L+GD  G + +L I  +  +  GL +  LGETS  ++I+YL + V Y+GS  GDSQL+++
Sbjct: 344  LIGDAYGRMSMLSI--DPIRGNGLTLLPLGETSPPTSIAYLTSQVFYLGSHMGDSQLLRI 401

Query: 329  --------------------------------------------------NLQPDAK--- 335
                                                              ++ PDA+   
Sbjct: 402  SPTPHSLIDKPTLPIDPRISTVLPSQLSSYNAGESVKGKGKRRADLDSDIDVDPDAQSGR 461

Query: 336  --------GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIG 387
                    GSY+EVL  Y NL P+ D  +++ +  GQ Q+VTCSG    GSL++VR G  
Sbjct: 462  KGKVVRSDGSYLEVLATYQNLAPVTDALLMNADGSGQPQIVTCSGGANAGSLKVVRKGAD 521

Query: 388  INEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE--TEIEGF 444
                A VE L G   +W +R    D  D+++V S +  T++L +   D +         F
Sbjct: 522  FKTAAVVESLPGTVSVWPVRKRYYDNTDSYIVASTLRCTQVLLLEEHDTVNPLVAASTDF 581

Query: 445  CSQTQTLFCHDAIYNQLV-------------QVTSGSVRL-----VSSTSRELRNEWK-S 485
             +   T+   + +  +LV             QVT   +RL     +      L + WK S
Sbjct: 582  ATSGPTISVANILRRRLVNGKSEYEDSSLVVQVTPSKMRLLEHDMIGPVEFRLVDTWKPS 641

Query: 486  PPG-YSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ-LEYEISCLDINPIGEN 543
             PG   +  A+ N +Q+ L   GG L    +      +++  Q    +IS +   P+   
Sbjct: 642  GPGPQEIVTASINPTQIALGLRGGRLCVFRLAPNDHFDLRFTQHFSNDISAVSCLPLNPG 701

Query: 544  PSYSQIAAVGMWTDISVRIF----SLPDLNLITKEHLGGEIIPRSVLLCAFEGISY---- 595
               S   AVG W   +V I     ++ +L L T        +PRS+LL  F G S+    
Sbjct: 702  NLISAFIAVGFWGSNNVMILCQKGNILELELQTDPL---PALPRSLLLYNF-GTSFGKKD 757

Query: 596  ------LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
                  LL  L DG L+++    K  EL D+K V LG  P++L    +     +F    R
Sbjct: 758  PNYHAHLLIGLADGSLVSYAYARK--ELKDKKVVPLGASPVSLVPCEANGKKAIFCCGTR 815

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI 709
              V+Y    +L  +   LK V   CP NS +F  S  +      TIG   ++  LH+RS+
Sbjct: 816  AAVVYWDRDRLQNAPALLKNVVTACPLNSTSFEQSTILVTGSGFTIGHFGNVAGLHVRSV 875

Query: 710  PLG-EHPRRICHQEQSRTFAICSLKNQSCA----EESEMHFVRLLDDQTFEFISTYPLDT 764
            PLG + P+RI +  +S    +  ++ +       E +     RLLDD +F  +  + L+ 
Sbjct: 876  PLGVDVPKRITYNNESHLLGVACIRKEPHRIGDDEGTIRSSFRLLDDTSFGELDRFDLEA 935

Query: 765  FE--YGCSILSCSFSDDSNVYYCVGTA-YVLPEENEPTKGRILVFIVEDGKLQLIAEKET 821
             E      +LS   ++    ++C+GTA +   ++ E +KGR++VF      L  +A  + 
Sbjct: 936  DEDITSAVVLSLGTAEAYTSHFCIGTADFTSDDQLEVSKGRLVVFDPSTKVLSPVATLDV 995

Query: 822  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT-----RELQSECGHHGHILALYVQTR 876
             G VY+L +  G + AA+N  + +Y+  L  DG      R +Q    +H + +   V TR
Sbjct: 996  NGCVYALASIQGLVAAAVNSAVIVYR--LETDGPTFSSKRLVQLANWNHNYFVTNLV-TR 1052

Query: 877  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
            G  I VGD + S+S+L    +  A++  ARDY   W  A+E    D  +GA+  FNLFT 
Sbjct: 1053 GSRIFVGDAISSVSILELTGQ--ALQTVARDYGPLWPVAIESTGPDSVIGADGEFNLFTF 1110

Query: 937  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGV 994
            + +         G+LE  G YHLGE VN+F  G L+   P         P     T +G 
Sbjct: 1111 KLS--------EGKLERDGSYHLGEQVNKFVPGGLLAADPAHTTQTTCKPIQTLFTSSGR 1162

Query: 995  IG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA---KNFLDGD 1050
            I  VI  L  E  L L  L  N+ KVI G+ G+ +E WRS    +   DA   + FLDGD
Sbjct: 1163 IAIVIDVLDPEVSLHLTNLHRNMSKVITGLTGIQNETWRSPATSRGRTDAETSRGFLDGD 1222

Query: 1051 LIESFLDLSRT--RMDEISKTMNVS 1073
             +E+FLD+ RT   + EI +  NV+
Sbjct: 1223 FLEAFLDVPRTSPSLAEILEGENVA 1247



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 39/270 (14%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQEL-NLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           V T H P++V        TS  ++ +L++AK  ++E+  L P+GL+      I+GRI  +
Sbjct: 4   VSTFHPPSSVIDCVKCKLTSAPDIEHLVVAKPDKLEVFSLQPEGLRLETSTEIWGRILRI 63

Query: 66  ELFRPHGEAQDFLFIATER--YKFCVLQWDAESSEL----ITRAMGDVS----DRIGRPT 115
                 GE +  L + T+    K   L+ + E        I  + G  S    D+  R  
Sbjct: 64  RELPVQGERRSNLLVLTDHPDPKLIALELEDEGDTPRLVEIKTSSGTKSISLHDKNSRQA 123

Query: 116 DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP 175
           +      + P   +I +  Y G   V+   + G L++ F + L+E+ +L + FL      
Sbjct: 124 EFLTDVWVHPSGSVILVSCYAGRLTVVRVRD-GVLQQEFPVSLQEINLLALCFLPSPVGD 182

Query: 176 ---------TIVVLYQDNKD-----ARHVKTYEVALKDKDFVEG---PWSQNNLD-NGAD 217
                    +I ++Y D++      AR ++ +E++++    +     P S ++L  NG  
Sbjct: 183 DEDPETEVISIGIVYLDHQSRVQLLARDLEAFELSVQPSPALPPTPLPISADDLSLNGTS 242

Query: 218 L-LIPVPPPLC--------GVLIIGEETIV 238
           L L+P+P  L         GVL++G   ++
Sbjct: 243 LSLVPIPTTLADIDANFRGGVLVLGGRKVM 272


>gi|380481704|emb|CCF41690.1| CPSF A subunit region, partial [Colletotrichum higginsianum]
          Length = 932

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 256/968 (26%), Positives = 449/968 (46%), Gaps = 115/968 (11%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTD 116
           +YG I  L+  RP     D LF+ T+R+++   +WD  +  L T + + D ++   R   
Sbjct: 7   VYGTILFLQRLRPKDTKADLLFVGTDRFQYFTARWDPATQRLQTEQVIEDAAEPHMRDAQ 66

Query: 117 NGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKG----QLKEAF-NIRLEELQVLDIKFL-Y 170
           +    ++DP  + + +HL++G+  V+    +     +L +++  +RL EL V    F+  
Sbjct: 67  SQDRCLVDPTGKFMAMHLWEGVLNVMRLGTRKGTFTRLDDSWERVRLSELFVKASTFVPT 126

Query: 171 GCAKPTIVVLYQDN--KDARHVKTYEVALKDKDFVEGPWSQNN--------LDNGADLLI 220
               PT+  LYQ    K+  H+  Y +   DK+     +  +          D  A ++I
Sbjct: 127 ETGHPTVAYLYQSQIEKEDAHLAIYRLMSDDKNTTVSRFDPSRDREFELEIKDPYARIVI 186

Query: 221 PVP------------------PPLCGVLIIGEETIVYCSANAFKAIPI---RPSITKAYG 259
           PVP                    L G++++GE  +VY        +      P+I  A+ 
Sbjct: 187 PVPIVEDEVKRYHKRDTTGAKAQLGGLIVVGETLLVYVDTLTRTVVESGLNSPAIFVAWA 246

Query: 260 RVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
             D   + Y L D  G LHLL I  E   VT L + LLG TS AS + ++ N ++++GS 
Sbjct: 247 AYD--DTNYFLSDDYGNLHLLTIETEGVVVTNLSLRLLGVTSRASCLVHMGNGLLFLGSH 304

Query: 320 YGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVV 368
           YGDSQL+++N++   K   V+ +    ++ PI+DF ++DL              GQ ++V
Sbjct: 305 YGDSQLLQINME-SLKTRLVQTIP---SIAPILDFSIMDLGNAGDSQVGNAFSSGQARIV 360

Query: 369 TCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRI 427
              G +++GSLR +R+ +G+ +   +E LQ ++G++SLRS      DT LVVSFI+ETRI
Sbjct: 361 AGCGVHQNGSLRSIRSSVGLEDIGVLEDLQDVRGLFSLRSHGSPKVDT-LVVSFITETRI 419

Query: 428 LAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 486
            + + E  +EE  E +G      TL        +L+QVTS +V L+ S      N W  P
Sbjct: 420 FSFDPEGGIEEVFEFQGLALDRPTLVATTLPDGRLLQVTSTTVTLLESERGITLNTWAVP 479

Query: 487 PGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKH-----AQLEYEISCLDINPIG 541
            G ++  A+AN   VLL+  G  LV L + + +  + +         E +ISC     I 
Sbjct: 480 DGKAIVNASANNKWVLLSINGTTLVSLNLLNNLSAQEQVLGRDIGGHEDQISC-----IH 534

Query: 542 ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE----IIPRSVLLCAFEGISYL- 596
                  +  VG W   SV I  L  L+ +  E +        +PR + L        L 
Sbjct: 535 AASDLDDVGVVGFWATGSVSIIDLRTLDALHGETIKQTDDSVSVPRDLALVQLHPPHLLG 594

Query: 597 ---LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF---SSKNTTHVFAASDRP 650
                A+ DG +++F ++ +   L+ RK V+LG+Q   L        +  +++FA ++  
Sbjct: 595 PTLFVAMEDGQVVSFNVSKQDFSLSSRKSVTLGSQQAGLHVLPRPGGEGISNIFATTEHS 654

Query: 651 TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
           ++IYSS  +++YS    ++V+++ PF+S AFPD++ +A +  + I  ID  ++ H+  +P
Sbjct: 655 SLIYSSEGRIIYSAATAEDVTYIAPFDSEAFPDAIFLATDQNIRIAHIDAERRTHVNPLP 714

Query: 711 LGEHPRRICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFEFIST-YPLDTFEYG 768
           L E  RR+ +    R F I ++  +    EE      RL+D+     +   + LD     
Sbjct: 715 LRETVRRVAYSPALRAFGIGTISRELVNNEEVVTSSFRLVDEIVLGVVGKPFHLDG---- 770

Query: 769 CSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSL 828
                   S  + +   V  A +     +P                  AE+   GA  SL
Sbjct: 771 --------STSTEMVESVIRAELPDSMGQP------------------AERFIIGACRSL 804

Query: 829 NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
                KL+A +++ + +Y++      +  L+           + +   G+ I + DLM+S
Sbjct: 805 GIMGEKLVAGLSKTVVVYEYAEESSTSGALRKLATFRPSTFPVDIDVNGNMIGIADLMQS 864

Query: 889 ISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
           ++L+ +       +  + ERAR +   W ++V  L+   +L A+   NL  +R+N +  T
Sbjct: 865 MTLVEFIPAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMVLRRNPDAPT 924

Query: 945 DEERGRLE 952
           + ++ ++E
Sbjct: 925 EHDQKQME 932


>gi|449549048|gb|EMD40014.1| hypothetical protein CERSUDRAFT_63520 [Ceriporiopsis subvermispora B]
          Length = 1265

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 239/797 (29%), Positives = 383/797 (48%), Gaps = 84/797 (10%)

Query: 335  KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
            KG ++EVL+ + N+ PIVD  + DL+  GQ Q++TCSG    G+L++VR G    E A V
Sbjct: 450  KGQFIEVLDTFQNIAPIVDAVLADLDDSGQSQIITCSGGRNSGALKVVRTGADFQELARV 509

Query: 395  E-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE--TEIEGFCSQTQTL 451
              + GI  +W +RS  +   D+ LV S  +ET +   +  D + +  +  +GF +   TL
Sbjct: 510  NGITGITSLWPVRSRFEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADGFITTAPTL 569

Query: 452  FCHD--------------AIY---NQLVQVTSGSVRLVSSTSR----ELRNEWKSPPGYS 490
               +              + Y   + ++QVT   + L+   +      L  E   P    
Sbjct: 570  AAANIPRRVSTNAGGRVSSSYVDSSLVIQVTPEMITLLEYDAALGLFSLVGEGWDPKSQG 629

Query: 491  -------VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-------EYEISCLD 536
                   +  A  NASQ+++   GG +  L + D    +V+ ++          ++S + 
Sbjct: 630  AIGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQRSRGFADPVYGPLDVSAVS 689

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLP--DLNLITKEHLGG-EIIPRSVLLCAF--- 590
              P     +++   AV  W    V+I S+   D  L T   + G   +PRSVLL  F   
Sbjct: 690  CVPFDRTKNFATNIAVAFWGTNKVQILSISSQDATLATVCEVSGLPSLPRSVLLHNFGTG 749

Query: 591  ------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
                  +   ++L  L DG +++F  ++   EL ++K  SLG  P++L          VF
Sbjct: 750  RTKKEPDFHPHVLVGLVDGSVISF--SVVENELKEKKVFSLGIAPVSLSRCEVDGKITVF 807

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
            A   R +V+Y   ++L  S V +K+++     N++ F  SL +A    L IGTI  + K+
Sbjct: 808  AVGSRTSVLYWDKQRLTNSPVMIKDMAVGTSLNTSYFRSSLVLAASSGLIIGTIRGVDKM 867

Query: 705  HIRSIPLG-EHPRRICHQEQSRTFAI-C--SLKNQSCAEESEMHFVRLLDDQTFEFISTY 760
             IRSIP G   PRRI +  + + F + C  ++  +    +      +++D  TF  +  +
Sbjct: 868  QIRSIPFGLSDPRRIAYHSRLKLFGVGCNRTMPLRPGEFQGTTSSFKIIDATTFNGLWDF 927

Query: 761  PLDTFEYGCSILSC-SFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV--------EDG 811
             L   E   S+++    +D  +  +CVGT +   EE EPT GR+L+F +         DG
Sbjct: 928  ELQANEEVSSVMALPDGTDGRSPCFCVGTVFFEVEETEPTSGRLLLFAIGSDGATSSADG 987

Query: 812  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR-ELQSECGHHGHILA 870
            +L+L+  ++ KG V+ + + N  + AAIN  + L+   LRD   +  LQ     + +   
Sbjct: 988  ELRLVTTQDVKGCVFQITSVNNFIAAAINSNVVLFA--LRDTNKQYALQQVADWNHNYFV 1045

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
              + + GD ++VGD + S+SLL  +     IE  +RDY+  W  AVE   ++  +GA ++
Sbjct: 1046 TNLASHGDRLIVGDAISSVSLL--RVSVARIECLSRDYSPLWPVAVEATAENQIIGANSD 1103

Query: 931  FNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVI 987
             NLF+   ++ +G     R  LE  G YHL + VN+F  G LV    DS  G    P  +
Sbjct: 1104 CNLFSFALQHIDG-----RKVLERDGSYHLDDIVNKFAPGGLVA--ADSSTGYTLRPRQL 1156

Query: 988  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK--- 1044
            F + +G IGVI  +  E  L L  LQ N+ K IKG G  NH +WR+  N +   DA+   
Sbjct: 1157 FFSSSGRIGVIIDVDDELSLPLTSLQMNMAKRIKGPGDTNHTEWRAPTNARGRTDAEASA 1216

Query: 1045 -NFLDGDLIESFLDLSR 1060
              FLDGD IE FL   R
Sbjct: 1217 FGFLDGDFIEQFLTHPR 1233



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 166/392 (42%), Gaps = 69/392 (17%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
           V T H P++V+ S     TS     L+IAK  R+ +  + P+GL+      I+GR+ +L 
Sbjct: 4   VSTFHPPSSVSSSIRCRLTSSPTECLVIAKTNRLVVLSIQPEGLREESTFDIWGRVLSLR 63

Query: 67  LF--RPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVS--DRIGRPTDNGQIGI 122
                  G       I     K  VL   A+ S L     G VS  +R GR  +      
Sbjct: 64  TIPVDDTGSCNILALIDHPDAKLIVLGGVADDSGLTLVTKGHVSLQERGGRVAEFLTDVF 123

Query: 123 IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEA-FNIRLEELQVLDIKFLYGCAKPTIV-VL 180
           + P   +  +  Y G  KV+ F        A F++ + E+ +L + FL+      I+ ++
Sbjct: 124 VHPGGEVAVVSCYAGKLKVVQFKEGNIDTHAHFDVSIPEMNILALNFLHTDDNQYILAII 183

Query: 181 YQDNKDARHVKTYEVALKDKDFVEGP--------WSQNNLDN--GADLLIPVPPP----- 225
             D++    + + ++ L++ +    P         S ++  +     LL+P+ P      
Sbjct: 184 NYDHQRRVQLLSRKLDLENYELDPSPSVVLLSTQLSSSHFPSIETPPLLVPIFPEGDGGH 243

Query: 226 LCGVLIIGEETIVY-----------------------CSANAFK------------AIPI 250
           L GVL++G   I++                        S +  +            A  +
Sbjct: 244 LGGVLVLGGRKILFFEHTSEDRQQIKREKQIRLERRLSSKDPMEVAKAREKEKERDARKV 303

Query: 251 RPSIT--------KAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSI 302
           +P  +         A+  +D +  R+L+GD  G L LLV+       TGL +  LGETS 
Sbjct: 304 KPKFSVKWPWSDVTAWCPLDEESRRFLVGDAYGRLALLVL-----DTTGLIVSPLGETSP 358

Query: 303 ASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA 334
            +T+SYLD+ VVY+GS  G+ QL++++  P A
Sbjct: 359 PTTLSYLDSQVVYVGSHMGNPQLLRIHTSPIA 390


>gi|225680146|gb|EEH18430.1| DNA damage-binding protein [Paracoccidioides brasiliensis Pb03]
          Length = 1138

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 257/929 (27%), Positives = 417/929 (44%), Gaps = 165/929 (17%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIA----------KCTRIEIHLLTPQGLQPMLD 55
           YVV  H  +++ H+    F +P E  L++A          K  R+E +  TP+GL     
Sbjct: 3   YVVPIHHASSIRHALKLQFLNPGEDCLVVAITYTIHLPPSKSNRLEFYSQTPEGLSLQYS 62

Query: 56  VPIYGRIATLE---------------------------------------LFRPHGEAQD 76
             IYG++ TL                                        LF P     D
Sbjct: 63  KAIYGKVTTLAKLSRPPIQQQQQQQQQQQQQQQQQQPQTQSQSPPQIQQPLFLPQ---TD 119

Query: 77  FLFIATERYKFCVLQWDAESSELIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLY 135
            LFI T+R  +  + W+  +S+L T R   D++D   R +  G   +IDP  + I L LY
Sbjct: 120 VLFIGTDRATYFTVSWNPVTSQLRTERKYVDLADPSSRESQLGDRCLIDPSGKFITLELY 179

Query: 136 DGLFKVIPFDNKG-----------------------------------QLKEAFNIRLEE 160
           +G+  VIP                                        +L E    R++E
Sbjct: 180 EGIITVIPIGQPQRTARQSGRKYGKRAVTAQNQHDSSHIGNTNAAGEVELGEPCQARVDE 239

Query: 161 LQVLDIKFLYGCAK--PTIVVLYQDNKDARHVKTYEV----------------------- 195
           L V    FL+  A   P +  LY+D      +K  E+                       
Sbjct: 240 LLVRSSAFLHTQADMLPRMAFLYEDTMGQVRLKVRELEFTYGGMGIGTGGGAGQDTGCIA 299

Query: 196 ALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPI-RP 252
             K  D +     +  L+ GA  LIPVP PL G+L++GE +I Y   + N   ++P+   
Sbjct: 300 VFKALDLL-----KEELEMGASFLIPVPAPLGGLLVLGETSIRYLDDATNECISLPLDEA 354

Query: 253 SITKAYGRVDADGSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDN 311
           +I  A+ +VD  G R+LL D  G L  L++I  E   V   K++LLG    AS + YL  
Sbjct: 355 TIFVAWEQVD--GQRWLLADDYGRLFFLMLILDEDNAVQSWKLDLLGNIPRASVLVYLGG 412

Query: 312 AVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ---- 362
            V +IGS  GDSQLI++      +GS+ E+++ + N+ PI+DF ++DL     E Q    
Sbjct: 413 GVTFIGSHQGDSQLIRIT-----EGSF-EIIQTFSNIAPILDFTIMDLGGRAGENQTHDF 466

Query: 363 --GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVV 419
             GQ ++VT SGA+ DGSLR VR+G+G+ E   +  ++ I  +W+LR +  + F   L+V
Sbjct: 467 SSGQARIVTGSGAFDDGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLV 526

Query: 420 SFISETRILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
           SF+ ETR+     + E+EE  E  G      TL   +    +++QVT  +VR+       
Sbjct: 527 SFVDETRVFHFTQDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGM 586

Query: 479 LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDI 537
           L   W  P   ++  A++N   ++L  GG  L+  +I G+  L   K    + ++S + +
Sbjct: 587 LLWNWSPPSQKAITAASSNDDHLVLVVGGQVLMCFDIQGEVKLAGKKDFGDDTQVSGVTV 646

Query: 538 NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGI 593
                +P+   I  +    ++ V   +L D+ +     +G  GE  PRSVL+        
Sbjct: 647 T---SSPATYCILCLPQTAEVVV--MNLEDMTIRHSTSVGEPGEAFPRSVLVAEVLPNQP 701

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTV 652
           + L  ++ DG + +F  N     L    K+ LG+ QP   +        ++FA  ++P++
Sbjct: 702 ATLFVSMADGRVFSFSFNADEFTLKKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSL 761

Query: 653 IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 712
           IY++  +++YS V+  + S +C FNS A+P S+A+A   EL I  +D  +   I ++ + 
Sbjct: 762 IYATEGRIIYSAVHSDQASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEID 821

Query: 713 EHPRRICHQEQSRTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCS 770
           E  RR+ +    + F I ++K   ++ AE     F+ L D+  F  +  Y L   E   S
Sbjct: 822 ETVRRVAYSAAEKAFGIGTIKRTLENGAEVITSRFM-LADEIMFRELDDYSLRPDELVES 880

Query: 771 ILSCSFSD--DSNV------YYCVGTAYV 791
           ++   F +  DSN        + VGT+Y+
Sbjct: 881 VIQAQFPEGKDSNGNESFKDIFVVGTSYL 909



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 14/231 (6%)

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEERARDYNANWMSAVEILDDDIYLGA 927
            Y+   G+ I V DLMKS+S++ +K  E     ++ E AR +   W +AV  + ++++L +
Sbjct: 908  YLDDVGNLIAVADLMKSVSIIEFKQGENDQPDSLTEVARHFQTLWSTAVAPIAENMFLES 967

Query: 928  ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI---P 984
            +   NL  + +N  G TD+++ RLEV  E  LGE VNR R  S+   LP +   +    P
Sbjct: 968  DAEGNLVVLNRNVNGVTDDDKRRLEVTSEILLGEMVNRIRPVSIQGSLPATGPREAVISP 1027

Query: 985  TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDA 1043
                GTV G I +   +       L +LQ+ +  ++   G +   ++R+F N  ++  + 
Sbjct: 1028 KAFLGTVEGSIYLFGLINPAYQDLLMRLQSAMAGLVVTPGAMPFNKFRAFKNAVRQAEEP 1087

Query: 1044 KNFLDGDLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 1088
              F+DG+LIE F        +EI          +V+VE++ + VEEL R+H
Sbjct: 1088 YRFVDGELIERFWTCETALQEEIVGLVVAGGVADVTVEKVKRIVEELRRMH 1138


>gi|74212634|dbj|BAE31055.1| unnamed protein product [Mus musculus]
          Length = 261

 Score =  295 bits (756), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 142/255 (55%), Positives = 190/255 (74%), Gaps = 5/255 (1%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
           +NYVVTA KPT V     G+FTS ++LNL+IAK TR+EI+++T +GL+P+ +V +YG+IA
Sbjct: 3   YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIA 62

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIG 121
            +ELFRP GE++D LFI T +Y  C+L++    ES ++ITRA G+V DRIGRP++ G IG
Sbjct: 63  VMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIG 122

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLY 181
           IIDP+CR+IGL LYDGLFKVIP D   +  +AFNIRLEEL V+D+KFLYGC  PTI  +Y
Sbjct: 123 IIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVY 182

Query: 182 QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
           QD +  RHVKTYEV+L++K+F +GPW Q N++  A ++I VP P  G +IIG+E+I Y  
Sbjct: 183 QDPQ-GRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITY-- 239

Query: 242 ANAFKAIPIRPSITK 256
            N  K + I P I K
Sbjct: 240 HNGDKYLAIAPPIIK 254


>gi|299743623|ref|XP_001835883.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
 gi|298405741|gb|EAU85948.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
          Length = 1282

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 335/1280 (26%), Positives = 544/1280 (42%), Gaps = 247/1280 (19%)

Query: 31   NLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIAT-----ERY 85
            +L+IAK  RI+++ L P GLQ    + ++GR+  +++    G  +  L + T     E  
Sbjct: 28   HLVIAKLDRIDVYSLQPSGLQHECGIDVWGRVLCVKVLPIPGTDRSKLVLMTSHPDPELV 87

Query: 86   KFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFD 145
             F         ++L       + +R  R  +     +I P   L     Y G  +++  +
Sbjct: 88   FFSYRDNVEGGAQLKVTKSLSLYERSSRTAEFFNDLLIHPSGTLAIASCYVGKLRIVKLE 147

Query: 146  NKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVA-LKDKDFVE 204
              G   E ++  L EL VL I FL    + +I +L+ D +    +   E+    D DF  
Sbjct: 148  G-GDWVEDYDYTLPELNVLSIAFL-PTEEYSIAILHVDLQSRVQLLAREIPESSDSDFSI 205

Query: 205  GPWSQNNLDNGADLLIPVP----PPLC------------------GVLIIGEETIVYCS- 241
             P +  N    ++  IP P    P L                   GVL+IG   I+    
Sbjct: 206  RPSTVLNPTVISNKSIPFPTEYIPKLVAVPAGQYEEVDDDSTFLGGVLVIGGRKILLYEL 265

Query: 242  --------------------ANAFKAIPIRPSITKAYGRVDA------------------ 263
                                A++ KA   R    +  GR                     
Sbjct: 266  ASEESREKQKGKAARLEKMLADSDKAQEARAKQAEREGRRRKPTASVVWPWDEVATWCVI 325

Query: 264  DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
            D SR+L+ D  G L LL +  +  K  G+ +  LG TS  ++++YL N V+++GS  GDS
Sbjct: 326  DDSRFLISDVCGGLSLLGV--DNVKTNGMTLLPLGMTSPPTSLTYLTNQVIFVGSHLGDS 383

Query: 324  QLIK------------LNLQPDAK------------------------------------ 335
            QL++            L++ P+ K                                    
Sbjct: 384  QLVQVSSTPNNQDGPMLDILPEIKTVARNMPAPSRDKGKGRASDEAMDVDDEDDDDISRG 443

Query: 336  ------GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 389
                  GS++ VL  + N+ PI D  VVD+E  GQ ++VTCSG Y  GSL IVR+G   +
Sbjct: 444  RIIKPEGSHLHVLHSFKNIAPINDAVVVDVEGNGQNEIVTCSGGYTSGSLNIVRSGAEYH 503

Query: 390  EQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE--------LEETE 440
            E A++  +  +  +W+++S+ +D   + +V S  +  R L   ++D+        L+ T 
Sbjct: 504  EAATLPGVCNVNSLWTIKSNFEDTIHSHIVAS--THDRTLLFRIKDDGRNTTFTLLDSTA 561

Query: 441  IEGFCSQTQTLFCHD----------AIY---NQLVQVTSGSVRLVSST----SRELRNEW 483
               F +   T+   +          ++Y   N +VQVT   V L+           R  W
Sbjct: 562  ARDFITDQPTVALANVRKRVSVERKSVYRDCNWVVQVTDNVVNLLEHDVVLGGFNKRASW 621

Query: 484  KSPPGYS-----VNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLD 536
              P   +     +  A  N +QV+LA  GG LV L   + G   E V       EIS + 
Sbjct: 622  SPPSSVAPRPVEIVAADINPTQVVLALSGGRLVVLRHNEEGTAFELVAEKNTLREISAVS 681

Query: 537  INPIGENPSYSQIAAVGMWTDIS---------VRIFSL----------PDLNL---ITKE 574
                     Y+++  VG W  ++         V I  L          P L     ++K+
Sbjct: 682  CQAADTKTPYTKVFLVGYWEQVAEADTDRDTVVEILELERRSNPGSGTPSLTCLVKVSKK 741

Query: 575  HLGGEIIPRSVLLCAFEGI--------------SYLLCALGDGHLLNFLLNMKTG-ELTD 619
            ++    +PRS+LL +F G+              ++L C L DG + +F++    G  +TD
Sbjct: 742  YVPA--LPRSLLLYSF-GVPDSEPTNLKPNSQPTHLFCGLADGSVAHFVVWKDGGLNVTD 798

Query: 620  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 679
             K V LGT P+            V A  +R ++     K++ +S V LK+++   P N+ 
Sbjct: 799  SKIVPLGTTPVKFSACVVDGKRCVLAVGNRASIFSYERKRMAHSPVMLKDLNAAYPLNTH 858

Query: 680  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAI-CSLKNQSC 737
             FP S  +A    LTIG++ +I K+ IR+IPLG ++P+RI H    R +A+ C+      
Sbjct: 859  TFPTSFILANHQGLTIGSVKEIGKISIRTIPLGYDNPQRIVHIPLLRAYAVACATYTPVR 918

Query: 738  AEESEMH--FVRLLDDQTFEFISTYPLDTFEYGCSILSCS--FSDDSNVYYCVGTAYVLP 793
              ++E     ++LLDD TF+ +S Y  D+ E   ++ + +   S        VGT+    
Sbjct: 919  VGDAEAFKGSLKLLDDLTFKQLSQYNCDSDEVISALTTFTEEISGKETPLLVVGTS---- 974

Query: 794  EENEPTKGRILVFIVEDG----KLQLIAEKETKGA-VYSLNAFNGKLLAAINQKIQLYKW 848
                 ++ R+LVF V       +L LI   E  G  V SL      +LAA++  +  YK+
Sbjct: 975  ---SSSQARLLVFSVASSEACQELTLITSLEVNGQHVNSLCVMGNYVLAAVDCAVFSYKF 1031

Query: 849  ----MLRDDGTRELQSECGHHGHILALYVQTRGDF---IVVGDLMKSISLLIYKHEEGAI 901
                   D  + EL+ E G   H     V++ G F   +V+GD+  S+SL+     +G  
Sbjct: 1032 KGSSDDTDSQSSELK-EVGEWNH--NYIVRSLGSFNNSLVIGDIASSVSLV--NVNKGQF 1086

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 961
               ARDY   +  A+E L ++  +G  +  NLFT    S G     R  LE  G + LG+
Sbjct: 1087 TPIARDYAPLFPYALEALSENALIGGNDASNLFTF---SLGQGGMGRKVLERDGSFFLGD 1143

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY-LFLEKLQTNLRKVI 1020
               +F  GS+       +  + P  IF T +G IG +  +  +Q  L L  LQ NL  ++
Sbjct: 1144 LATKFIRGSITTDYTAIEALE-PIAIFFTGSGRIGAVIDIKDQQLALHLSGLQRNLSALV 1202

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAK----NFLDGDLIESFLDL--SRTRMDEI------SK 1068
            +GVG   H ++R+  N +   DA+     F+DGD +E+FL +   +  +D++       +
Sbjct: 1203 QGVGASTHTKFRAPRNNRGRTDAEAAGFGFIDGDFVETFLGMLGDKGMVDKVMTGQSAPE 1262

Query: 1069 TMNVSVEELCKRVEELTRLH 1088
             +  SV+E  K +E L  LH
Sbjct: 1263 KLEFSVDEYQKTLETLQGLH 1282


>gi|449540702|gb|EMD31691.1| hypothetical protein CERSUDRAFT_109269 [Ceriporiopsis subvermispora
            B]
          Length = 1265

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 234/801 (29%), Positives = 383/801 (47%), Gaps = 92/801 (11%)

Query: 335  KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
            KG ++EVL+ + N+ PI+D  + DL+  GQ Q++TCSG    G+L++VR G    E A V
Sbjct: 450  KGQFIEVLDTFQNMAPIMDAVLADLDDSGQSQIITCSGGRNSGALKVVRAGADFQELARV 509

Query: 395  E-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE--TEIEGFCSQTQTL 451
              + GI  +W +RS ++   D+ LV S  +ET +   +  D + +  +  + F +   TL
Sbjct: 510  NGITGITSLWPVRSRSEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADEFITTAPTL 569

Query: 452  FCHDAIYNQLVQVTSGSVRLVSSTSRE-------------------------LRNEWKSP 486
                A+ N   +V++ +   VSS+  +                         L  E   P
Sbjct: 570  ----AVANIPRRVSTNASGRVSSSYVDSSLVIQVTPEKITLLEYGAALGLFSLVGEGWDP 625

Query: 487  PGYS-------VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ-------LEYEI 532
                       +  A  NASQ+++   GG +  L + D    +V+ ++          ++
Sbjct: 626  KSQGAIGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQRSRDFADPVYGPLDV 685

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP--DLNLITKEHLGG-EIIPRSVLLCA 589
            S +   P     +++   AV  W    V+I S+   D  L T   + G   +PRSVLL  
Sbjct: 686  SAVSCVPFDRTKNFATNIAVAFWGTNKVQILSMSSQDATLATVCEVSGLPSLPRSVLLHN 745

Query: 590  F---------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            F         +   ++L  L DG +++F   +   EL ++K  SLG  P++L      + 
Sbjct: 746  FGTGRTKKEPDYHPHVLVGLVDGSVISF--KVVENELKEKKVFSLGIAPVSLSRCEVDDK 803

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              VFA   R +V+Y   ++L  S V +K+++     N++ F  SL +A    L IGTI  
Sbjct: 804  ITVFAVGSRTSVLYWDKQRLTNSPVMIKDMTVGASLNTSYFRSSLVLAASSGLIIGTIRG 863

Query: 701  IQKLHIRSIPLG-EHPRRICHQEQSRTFAI-C--SLKNQSCAEESEMHFVRLLDDQTFEF 756
            + K+ IRSIP G  +PR I +  + + F + C  ++  +    +      +++D  TF+ 
Sbjct: 864  VDKMQIRSIPFGLTNPRWITYHSRLKLFGVGCNHTMPLRLGEFQGTTSSFKIVDATTFDG 923

Query: 757  ISTYPLDTFEYGCSILSC-SFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV------- 808
            +  + L   E   S+++    +D  +  +CVGTA++  EE EP  GR+L+F +       
Sbjct: 924  LWDFELQANEEVTSVMALPDGTDGRSPSFCVGTAFLEVEETEPRSGRLLLFAIGSDGATS 983

Query: 809  -EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR-ELQSECGHHG 866
              DG+L+L+A ++ KG V+ + + N  + AAI+  + L+   LR+   +  LQ     + 
Sbjct: 984  SADGELRLVATQDVKGCVFQITSVNSFIAAAISSNVVLFA--LRNTNKQYALQQVADWNH 1041

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
            +     + + GD ++VGD + S+SLL  +  +  IE  +RDY      AVE   ++  +G
Sbjct: 1042 NYFVTNLASHGDLLIVGDAISSVSLL--RVSDSRIECLSRDYGPLRPVAVEATAENQIIG 1099

Query: 927  AENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-- 983
            A +  NLF+   ++ +G     R  LE  G YHL + V +F  G LV    DS  G    
Sbjct: 1100 ANSYCNLFSFALQHIDG-----RKVLERDGSYHLDDIVKKFVPGGLVA--ADSSTGYTLR 1152

Query: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            P  +F + +G IGVI  +  E  L L  LQ N+ K IKG G  NH +WR+  N +   DA
Sbjct: 1153 PRQLFFSSSGRIGVIIDVDDELSLPLTSLQMNMAKRIKGPGDTNHTEWRAPTNARGRTDA 1212

Query: 1044 K----NFLDGDLIESFLDLSR 1060
            +     FLDGD IE FL   R
Sbjct: 1213 EASAFGFLDGDFIEQFLTHPR 1233



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 169/393 (43%), Gaps = 71/393 (18%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
           V T H P++ + S     TS     L+IAK  R+E++ + P+GL+      I+GR+ +L 
Sbjct: 4   VSTFHPPSSASSSVRCRLTSSPTECLVIAKTNRLEVYSIQPEGLRAESTFDIWGRVLSLR 63

Query: 67  LFRPHGEAQDFLFIATERY---KFCVLQWDAESSELITRAMGDVS--DRIGRPTDNGQIG 121
              P  E      +A   +   K  VL    + S L     G VS  +R GR  +     
Sbjct: 64  TI-PAVETGSCNILALTDHPDVKLIVLGGVTDDSGLTLVTKGHVSLQERGGRVAEFVTDV 122

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEA-FNIRLEELQVLDIKFLYGCAKPTIVVL 180
            + P   +  +  Y G+ KV+ F        A F++ + E+ +L + FL+      I+ +
Sbjct: 123 FVHPGGEVAVVSCYAGMLKVVQFKEGNIDTHAHFDVSIPEMNILALNFLHSDDNQYILAI 182

Query: 181 YQ-DNKDARHVKTYEVALKDKDFVEGP--------WSQNNLDN--GADLLIPVPPP---- 225
              D++    + + ++ L++ +    P         S ++  +     LL+P+ P     
Sbjct: 183 VNYDHQRRVQLLSRKLDLENYELDPSPSVVLRSTQLSSSHFPSIETPPLLVPILPEGDGG 242

Query: 226 -LCGVLIIGEETIVY---CSANAFK--------------------------------AIP 249
            L GVL++G   I++    S N  +                                A  
Sbjct: 243 HLGGVLVLGGRKILFFEHTSKNRQQIKRWKQIRLESRLSSKDPMEVAKAREKEKERDARK 302

Query: 250 IRPSIT--------KAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETS 301
           ++P  +         A+  +D +  R+L+GD  G L LLV+       TGL +  LGETS
Sbjct: 303 VKPKFSVKWPWSDVTAWCPLDEECRRFLVGDAYGRLALLVL-----DTTGLIVSPLGETS 357

Query: 302 IASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA 334
             +T+SYLD+ VVY+GS  G+ QL++++  P A
Sbjct: 358 PPTTLSYLDSQVVYVGSHMGNPQLLRIHTSPIA 390


>gi|387219217|gb|AFJ69317.1| dna damage-binding protein 1a, partial [Nannochloropsis gaditana
           CCMP526]
          Length = 383

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 169/380 (44%), Positives = 224/380 (58%), Gaps = 31/380 (8%)

Query: 457 IYNQLVQVTSGSVRLV--SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
           +   LVQVT  SVRL+  +S S  L +EW S  G  + VA  NA QV+LA  GG +VYLE
Sbjct: 4   VGEMLVQVTDASVRLLDLASASSPLLSEWISAHGTRITVAAGNAMQVVLALSGGEVVYLE 63

Query: 515 I--GDGILTEVKHAQLEYEISCLDINPI------GEN---------------PSYSQIAA 551
           +      L E     LE+E+SCL ++P+      GE+               P  + + A
Sbjct: 64  LKANQRALEEKARIHLEHEVSCLSVHPLIPGPVPGEDGAEEAMQVEDGREEAPPSAFLVA 123

Query: 552 VGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG-ISYLLCALGDGHLLNFLL 610
           VG WTD+SVR+ +LP L  + +  LG +   RSVLL   +  I YLL  LGDG L++F +
Sbjct: 124 VGTWTDLSVRLLALPSLQSLHRCELGSDTQARSVLLITLQADIHYLLVGLGDGFLVSFAV 183

Query: 611 NM--KTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNK-KLLYSNVN 666
            +  KT  L  RKKVSLGTQP++L  FSS      VF  S+RPTVI+ S   KLLYSNVN
Sbjct: 184 ALEGKTPALGPRKKVSLGTQPLSLTPFSSTAAEPCVFVCSERPTVIHVSKADKLLYSNVN 243

Query: 667 LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRT 726
             EV+ M PF+SA FPD LA+A E  L IGT+DDIQKL I+++PLGE PRRI H  Q+  
Sbjct: 244 TSEVTLMAPFHSALFPDCLALASETGLRIGTVDDIQKLRIQTVPLGESPRRIAHIPQAGV 303

Query: 727 FAICSLKNQSCAE-ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 785
            A+ + K       E E ++VR LDD +FE +  + L   E  CS+ +C+F+ D   Y  
Sbjct: 304 LAVLTAKYAVGENGEEETNYVRFLDDASFEAVGAFELRPMELACSVAACTFAKDPREYLV 363

Query: 786 VGTAYVLPEENEPTKGRILV 805
           VGT   L +E+EP +GR++V
Sbjct: 364 VGTCMALEDEDEPREGRLIV 383


>gi|403177920|ref|XP_003888718.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375173263|gb|EHS64847.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1326

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 280/1088 (25%), Positives = 478/1088 (43%), Gaps = 175/1088 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y+  A  PT+  H+   +F +P   +LI+ K + IE++ +  +GL+ +    ++  +  +
Sbjct: 3    YLTHAQLPTSTRHALKCDFIAPGVDSLILGKQSTIEVYGIESEGLKLLHQAKVFDVVEHI 62

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
              ++   ++   L + T       L++  +S+ +IT A   +     RP D  Q  I+DP
Sbjct: 63   NSYKKLTDSTSTLLVLTADLNLFTLRFCPKSATIITTASISLHQIGARPADYVQTSIVDP 122

Query: 126  DCRLIGLHLYDGLFKVIPF---------------------------------------DN 146
              R + LH  +G+  VIP                                        D 
Sbjct: 123  HGRCVVLHALNGILHVIPLVPGCLSNLRNLDPVLSKRKKANVSTGLASHSRNLHPSHNDP 182

Query: 147  KGQLKEAFNIRLEEL--QVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALK----DK 200
              ++  +F +RL E+  Q L+   L     PT++V+Y ++   R +++ ++ L+    ++
Sbjct: 183  DCEVYRSFQLRLNEVNVQALNFATLSPNYPPTLLVVYSNHLGDRVLRSRKIDLQAAHCEQ 242

Query: 201  DFVEGPWSQNNLDNGADLLIPVPPPL----------CGVLIIGEET--IVYCSANAFKAI 248
            +F  G    +  D    L+IP                G ++IGEET  +V      + A 
Sbjct: 243  EFFRG---YHCCDPATALIIPFSLTGEAGEDSDGVNNGAILIGEETAQLVRFGLVQYSAS 299

Query: 249  PIRPSITKA------------------------------YGRVDADGSRYLLGDHAGLLH 278
              R +I +A                              +  VD   + +LLGD  G L 
Sbjct: 300  DDRGNIREAEATAGQSNQLTEQGVIGGHVLRLPLGHYTCFCPVDGVPNCWLLGDLYGNLI 359

Query: 279  LLVITHEKEKVTGLKIEL----LGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----N 329
             L +   K+  TG    L     G       + Y+ +  V++ S YGDSQL+KL     +
Sbjct: 360  FLFL---KQSTTGTPPSLHYFHAGHVPSPEALVYITSGFVFLASHYGDSQLLKLPSPTSS 416

Query: 330  LQPDAKGS-YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI 388
            L PD   S   EV+  + NL PI DFCV +  +    Q+VTCSG+++DGSLR++++GIGI
Sbjct: 417  LNPDNTASAQPEVITTFPNLAPISDFCVTEDRKSLVNQIVTCSGSHRDGSLRVIKHGIGI 476

Query: 389  NEQASVELQGIKGMWSLRSSTD----DPFDTFLVVSFISETRILAMNLEDELEETEI-EG 443
             E  S+E+ G++ +W+LRSST     + FD  LV+S    TR LA+N +  +EE  +  G
Sbjct: 477  RESGSLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTRFLALNEDGTIEEIGLFNG 536

Query: 444  FCSQTQTLFC------HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
            F S   T+         D+     +QVT  S ++++  +      W+     S+  A  +
Sbjct: 537  FESDVPTILAGNLLDGSDSTTRYSIQVT--SRKIIAGDAL----VWEPDDAKSITRAALS 590

Query: 498  ASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTD 557
             +   ++     +V L I DG   E    +L  +IS L I+            A   W  
Sbjct: 591  VTTCAVSL-KEQVVVLCIKDGKFVEKGTYKLLNDISSLAID------QSENFVAAAQWVT 643

Query: 558  ISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS----YLLCALGDGHLLNFLLNMK 613
              + I S+   + I + +   + +  S+ +  FEG       LL  LGDG ++N  L   
Sbjct: 644  NCIEIISVSSSSTICRVNTDSDFMVNSLKMTNFEGTESDGCRLLIGLGDGKIMNVALG-P 702

Query: 614  TG---ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI--YSSNKKLLYSNVNLK 668
            TG   E    +  +LG +PI   +  +     ++A SD+PT+I    +N +  Y+ V ++
Sbjct: 703  TGMHVEGDSPRFTTLGIRPIEFVSMRNATGEFLWANSDQPTIIDRIQNNGRFAYTPVTVQ 762

Query: 669  --EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSR 725
               VS     ++  F DSL +A   E+ IG ++  +K++I  I LG E PRRI H E  +
Sbjct: 763  GGSVSSATGLHARFFQDSLVLASNDEIRIGKLNTTEKMNILKISLGNEQPRRIAHSEDMK 822

Query: 726  TFAICSLKNQSCAEESEMHFV---RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV 782
             + +   + +   +   +H +   ++ DD+TF+ + TY     E G SI +    ++   
Sbjct: 823  AYGVVCARLELDQDTGTIHRIGTFKVFDDETFQLLYTYNFGPMEQGSSIAAVKLGEEMIE 882

Query: 783  YYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEK---------ETKGAVYSLNAF-N 832
            ++ +GT  +   E E T GRIL     + K  L A+K         +  GAV  +    N
Sbjct: 883  HFVIGTGVIKSTEAEATIGRILAIRELNSKQDLTAKKRHFELTNVGKLSGAVGGVGGLPN 942

Query: 833  GKLLAAINQKIQLYKWMLRD--------------------DGTRELQSECGHHGHILALY 872
            G  +A+ N  +  +     D                    DG   L    G  G  ++  
Sbjct: 943  GMFVASANAFVHAFGLKKGDSGRAFPSGTDTVLAGSVPEMDGGFRLLDTWG--GGFVSQT 1000

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            V T G  ++VGDL KS+ LL +  E   +  +ARD++A  +  +  + +  ++ A++ FN
Sbjct: 1001 VVTDGTKVLVGDLYKSVVLLEFDLEHLELAVKARDFSAMSVRPIGAISEREFVAADSEFN 1060

Query: 933  LFTVRKNS 940
            +FTV+ +S
Sbjct: 1061 MFTVQYDS 1068



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 2/117 (1%)

Query: 969  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLN 1027
            GSLV R  +S +     +IF T  G IG+IA +   ++   L + Q++L K+   VG L 
Sbjct: 1151 GSLVPRFIESSLIGETKLIFVTSTGGIGLIAKIHSKKKTKQLARFQSDLSKISTSVGNLA 1210

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE-ISKTMNVSVEELCKRVEE 1083
            H  +R F  E + + +  FLDGD +E  LDL+   ++  + K M +  EE   +  E
Sbjct: 1211 HSAYRMFKTESRKIPSMGFLDGDFLEGCLDLTPDEVENLVKKMMALKAEEAQAKATE 1267


>gi|353235645|emb|CCA67655.1| hypothetical protein PIIN_01483 [Piriformospora indica DSM 11827]
          Length = 1145

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 288/1133 (25%), Positives = 495/1133 (43%), Gaps = 109/1133 (9%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
            V T   PT  +H+   N        L++A+  R+++++L   G+Q +  + +  R+  L 
Sbjct: 4    VSTYLPPTAASHAVKCNLGDDL---LVVARINRLDLYMLRSTGIQHVSSLELLPRVVALH 60

Query: 67   LFRPHGEAQDFLFIATE-RYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
               P       L I         VL++  +   L+  +   +    GRP        I P
Sbjct: 61   EISPEDGVSALLAITDHPDCSALVLEYSPKQRNLVVSSSQKLVLPYGRPLSGCVNCAISP 120

Query: 126  DCRLIGLHLYDGLFKVIPFDNK---GQLKEAFNIRLEELQVLDIKFLYGCAKPTIVV--L 180
            D R   + L+ G   ++ F  +    ++    +  + EL +L   FL   A+  I +  L
Sbjct: 121  DGRHAAIALFQGTMTILSFTREKGVARIARKVDSAIRELLLLSFAFLPLPAQDGIAISLL 180

Query: 181  YQDNKDARHVKTYEVALKDKDF-VEGPWSQNNLDNGADLLIPVPPPLC---GVLIIGEET 236
            ++    +RH+ T  V L   D   EG   +   ++    +I VP       G+L+ G + 
Sbjct: 181  HKSYTGSRHISTRGVDLDTLDISAEGSSIELREEDEPTRMICVPRAASKPGGLLLFGPDC 240

Query: 237  IVYCSANAFKAI--PIR--------PSITKAYGRVDADG------SRYLLGDHAGLLHLL 280
             ++  A+    +  P +        P + + +   D  G      SR LL D  G L LL
Sbjct: 241  TIFYQADKLHKMQSPAKSRRTSTRQPDLYEEWKYSDVSGYGFIDESRLLLSDKYGKLVLL 300

Query: 281  VITHEKEKVTG--LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSY 338
             + ++ +K+    + I LLGE S  S I+YL+  V++IGS  GDSQL+K+          
Sbjct: 301  ALDNDPKKIPAGAINIHLLGEASAGSCIAYLNAGVIFIGSETGDSQLMKIT-----SSGK 355

Query: 339  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ- 397
            +EV++ + N  PI D  + DL+  G   VVTCSG  + GSLR +R+G  I E AS+E   
Sbjct: 356  LEVIDTFSNTAPIADAVLADLDNTGDHVVVTCSGNGRTGSLRTIRSGANIEELASMETSI 415

Query: 398  GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET---EIEGFCSQTQTLFCH 454
             IK ++ L+  T      ++++S+  ET+++       L E    +  G   +  TL   
Sbjct: 416  PIKNIFPLQE-TSGTSHLYMLISYDQETKLVDAREAPRLSELSAHQFPGVAREFPTLAAG 474

Query: 455  D---AIYNQL---VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 508
            +    I++     VQVT+ +  L    S      W      S+  A+ +   V L   GG
Sbjct: 475  NVRRTIFDTTTLAVQVTTRAAILFDVQSGAEYCRWSG----SITTASVSGDAVCLGLRGG 530

Query: 509  HLVYLEIGDGILTEVKHAQLEY--EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP 566
             ++ L++       V  A+  +  EIS L I PI      S +  +G W D  V+I  L 
Sbjct: 531  KVIALKVDIEAAKLVTQAERNFDKEISTLSIEPIQSGEVTSNVVVIGFWEDFLVKICQLH 590

Query: 567  DLNLITKEHLGGEIIPRSVLLCAF----EGISYLLCALGDGHLLNFLLNMKTGEL--TDR 620
            +L  +  E +     P SVL   F    EG+ YLL   G+GH+L+  L      +  T R
Sbjct: 591  NLAQV-GEDIETPHTPHSVLAWNFGDRKEGL-YLLVGTGNGHILSVKLKETKNRVLATSR 648

Query: 621  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 680
            + V LG +P+ L   S      + A   R  ++  SN ++   +VN+K +  + PF S+A
Sbjct: 649  RTVVLGDRPVLLHRCSIAGAEVIMATGSRAMLLSWSNGRIAQHHVNIKNIESVAPFTSSA 708

Query: 681  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC-- 737
            F D+L       L+I  I  ++KL I S+ LG + P  + +    + FA+  L+ +    
Sbjct: 709  FGDALIFKLTKGLSIARIGKLEKLKIDSVSLGYDVPNTLAYHPDIKAFAVGCLRTEPSLN 768

Query: 738  -AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSIL--SCSFSDDSNVYYCVGTAYVLPE 794
             A ++     +L+D  TFEF++++     E    ++       D    Y  VGTA    E
Sbjct: 769  GASDNIGSSFKLIDALTFEFLNSHSFPPNEEVTKVIVGDLVMGDKQERYIIVGTAIWEDE 828

Query: 795  E-NEPTKGRILVFIVEDGK---------------LQLIAEKETKGAVYSLNAFNGKLLAA 838
            E +EPTKGRIL+F     K               L L+ E++  G+   L   + +L   
Sbjct: 829  EGSEPTKGRILLFRASLSKGMQVGSGAANAPPPVLTLVLEQDIPGSAVGLAVVDHRLAII 888

Query: 839  INQKIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            +N  + +Y+ + R    + L+ +      H + +   V      +V+GD ++S + L + 
Sbjct: 889  VNTIVVVYE-LRRTQTAQGLELKAVDQWIHNYAIWSIVPAGDSRVVIGDALQSATTLRWN 947

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIY-LGAENNFNLFTVRKNSEGATDEERGRLEVV 954
              +  +E  A+D+    ++++ +  D+ Y + ++ + NL + +         E   L+  
Sbjct: 948  GTK--LEVVAKDWTT--VNSLNVTADETYVIQSDIDGNLMSYKP--------EPPILQQT 995

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQ 1013
            G YH GE ++    GS+  R   +        +  T  G I +I   L  E+ + L  ++
Sbjct: 996  GHYHFGETISCLVPGSIRSRSNQNGSIVAAKHVLLTPGGRISLIQEILDEEKEMTLLAIE 1055

Query: 1014 TNLRKVIKG------VGGLN--HEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
             N+   +K       VG     H   R     ++ + +  FLDGD++   L+L
Sbjct: 1056 RNMSAALKAERDHYDVGSWRAPHVNTRRVITSEEPLQSYGFLDGDILSHALEL 1108


>gi|409049568|gb|EKM59045.1| hypothetical protein PHACADRAFT_181065 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1268

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 267/947 (28%), Positives = 412/947 (43%), Gaps = 155/947 (16%)

Query: 241  SANAFKAIPIRPSITKAYGRVDADGSR----------YLLGDHAGLLHLLVITHEKEKVT 290
            +A   K +  R ++   +  V A  SR          + +GD  G L LL I  + E   
Sbjct: 308  AARELKKVKPRATVKWPWSEVTASASRWCPADDEMRRFFVGDVFGRLSLLTINDDPE--- 364

Query: 291  GLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQP------------------ 332
             L I  LGE S  +T+SYL + V+Y+GS  G+SQL++++  P                  
Sbjct: 365  -LIIIPLGEISSPTTLSYLSSQVLYVGSVLGNSQLLRISPSPVGDIDSDTLPIPGGIHTI 423

Query: 333  ----------------------------------DAKGSYVEVLERYVNLGPIVDFCVVD 358
                                              + KG ++E L +Y N+ PIVD  + D
Sbjct: 424  KPAELSTLRAESPDEDYDMRDAFDTPEGRGGKIVNCKGRFIEELTQYANIAPIVDAVMAD 483

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFL 417
             +  GQ Q++TCSG    GSL +VR G    E A + E+  +  +W +R+S D P DT++
Sbjct: 484  PDESGQPQIITCSGGANTGSLNVVRTGADFQELAVLNEIPNVTNIWPIRTSFDGPADTYV 543

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN-----------------Q 460
            + + + E+ +L  +  D +  T I+   ++  T     A+ N                  
Sbjct: 544  LATTLYESFVLRFDDGDSV--TRIDPSATELVTNRPTIAVANIPRRTTQQNASTYINSSL 601

Query: 461  LVQVTSGSVRLVS---------------STSRELRNEWKSPPGYSVNVATANASQVLLAT 505
            +VQVT   + LV                S  ++    W++     +  A+ N SQ  +A 
Sbjct: 602  VVQVTPQGLNLVEYDVALGAFNKVGDGWSLQKQENPLWRA---KEIVAASINPSQFAVAL 658

Query: 506  GGGHLVYLEIG-DGILTEVKHAQLE-YEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 563
             GG  +   +  DG L  ++  +    EI+ L   P+  + ++S   AV  W   +V + 
Sbjct: 659  NGGTFLLFNLSPDGQLNLLQTREFHGKEIAALSCAPLDPSKNFSPFVAVSFWGSNTVTLL 718

Query: 564  SLPDLNLITKEHLGGEIIP---RSVLLCAF-EGIS--------YLLCALGDGHLLNFLLN 611
            S  D  L T  H     +P    S+LL  F  G S        Y++  L DG +    ++
Sbjct: 719  STKDPALGT--HTESAPLPALAHSLLLHNFGAGRSTRDADFQPYVVAGLVDGTVA--CVS 774

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
             +  EL D+K  +LG  P++L   +      V A   R  V Y   ++L  S V LK V+
Sbjct: 775  FRNNELRDQKLFALGAAPVSLAVSTVDGARMVLATGSRAAVFYWDRQRLRQSPVMLKNVA 834

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAIC 730
                 N+AAFP    +A    L +G I  + K+ IRS  LG E PRRI +      F + 
Sbjct: 835  VGAGLNTAAFPACQILATPSSLVVGQIRGVDKMQIRSFGLGHESPRRIAYHSDLNLFGVS 894

Query: 731  SLKNQSC----AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCV 786
              K+       AE  E  F  + D  TF  IS +  +  E   ++L+      +   + V
Sbjct: 895  IAKSAPARVGEAELQESTF-EIKDSVTFSTISLFTAEPDEEITAVLA--LPAGAPGCFVV 951

Query: 787  GTAYVLPEENEPTKGRILVFIVE---DG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
            GT      E EP+ GR+++F V    DG  +L+ +AE E  G VY+L A    + AA+N 
Sbjct: 952  GTVKHQHGEFEPSAGRLILFGVVPSVDGGRELKKLAEAEANGCVYALAAVENGVAAAVNT 1011

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL-IYKHEEGA 900
             + LY  M+  +G   L+     + +     +  RG  ++ GD + S+S+L + +     
Sbjct: 1012 SVDLYG-MVEHEGAHALEKVAAWNHNYFVTSLVARGGRLIAGDAISSVSVLEVLRGSH-- 1068

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
            +   ARDY   W  AVE   D   +GA  + NLFT         +  R  LE  G YHLG
Sbjct: 1069 LRTIARDYGPVWPVAVEATKDGGVIGANTDGNLFTF-----ALPEGPRAVLERNGHYHLG 1123

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTV-----IFGTVNGVIGVIASLPHEQY-LFLEKLQT 1014
            E VN+F  G+LV        G   ++     +F T +G +G++  +  +   L L  LQ 
Sbjct: 1124 ELVNKFIPGALVGNNSGGGSGGEGSLFETEQLFVTSSGRVGLVHHVCDDGVALALTALQR 1183

Query: 1015 NLRKVIKGVGGLN-HEQWRSFNNEKKTVDAKN----FLDGDLIESFL 1056
            NL  V+    G   H QWR+  N +   DA++    FLDGDL+ESFL
Sbjct: 1184 NLGGVLGDGPGGTAHGQWRAPANARGRSDAEDGATGFLDGDLLESFL 1230



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 7/185 (3%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQELN-LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           V T H+P+ V  S      +  EL  L++AK  RIE+  + P GL+    + I+GR+ ++
Sbjct: 4   VTTLHQPSAVVSSVKCKLVNHFELGYLVVAKTDRIEVSSIQPDGLRKECTLDIWGRVLSV 63

Query: 66  ELFRPHGEAQDFLFIATER--YKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
                  E    L + T+    K  +  ++ E+ EL  +   D+ DR  R  +     ++
Sbjct: 64  CAVPAEAEGVSNLLVLTDHPYPKLILFAFNGETRELDEKWFADLHDRNARHAEYLNDIVV 123

Query: 124 DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYG---CAKPTIVVL 180
            P  R   +  Y G  KV+ F  KG + + F + L EL +L + FLY        T+ ++
Sbjct: 124 HPAGRAAAVSCYAGKLKVVTF-KKGGVDKHFEVILPELNLLALSFLYSEPNAHTHTLAIM 182

Query: 181 YQDNK 185
           + D+K
Sbjct: 183 HIDHK 187


>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
            C-169]
          Length = 1205

 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 302/1229 (24%), Positives = 511/1229 (41%), Gaps = 176/1229 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59
            ++ Y +T  + + +  +  GNF++P+   +++++   +E  LL P     +Q +    ++
Sbjct: 1    MYLYNLTLSRASGIQCAIYGNFSAPKAQEIVVSRGKTLE--LLRPDDTGRVQTIFTTEVF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I +L  FR  G ++D++ + ++  +  +L++  E +               R    GQ
Sbjct: 59   GCIRSLAPFRLTGASRDYVIVGSDSGRIVILEYIKEQNYFRKIHQETYGKSGCRRIVPGQ 118

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-----YGC 172
               +DP  R  LIG      L  V+  D    L    +  LE  +  +I F       G 
Sbjct: 119  YLAVDPKGRACLIGAMEKQKLVYVLNRDQAANL--TISSPLEAHKSHNIVFSVIGLDMGF 176

Query: 173  AKPTIVVLYQDNKDARHVKTYEVA--------LKDKDF----VEGPWSQNNLDNGADLLI 220
              P    +  D  DA    T E A        L + D     V   WSQ  +DNGA+LL+
Sbjct: 177  DNPVFAAIELDYADADQDPTGEAAGNAQKQLTLYELDLGLNHVTRKWSQE-VDNGANLLV 235

Query: 221  PVPPPL---CGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR------- 267
            PVP       GVL+  E  I+Y +   A+    IP R S+    G +    +        
Sbjct: 236  PVPGGADGPGGVLVCAENFIIYSNQDHADVRAVIPRRTSLLIDRGVLIVSYAMHKQKSLF 295

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS--- 323
             +L+    G L+ + + +  + VT LKI+         +I  L    ++  S +G+    
Sbjct: 296  FFLVQSEYGDLYKVTLAYSGDTVTELKIKYFDTIPPCISICVLKTGFLFAASEFGNHALY 355

Query: 324  QLIKLNLQPDA-KGSYVEVLE------------------RYVN----LGPIVDFCVVDLE 360
            Q + +    DA + S  E+ E                  R V+    L PI+DF V +L 
Sbjct: 356  QFLSIGDDDDAVEASSAELTETQEGFQPVFFDPRPLRNLRLVDEVESLSPIMDFKVANLL 415

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
            ++   Q+    G     +LR++R G+   E A   L G    +W+L+ S +DPFD +++V
Sbjct: 416  KEEIPQLYAMCGRGARSTLRVLRPGLAATEIAVSPLPGNPTAVWTLKRSVNDPFDAYIIV 475

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF + T +L++   + + E    GF     TL       + ++QV    +R + +  R  
Sbjct: 476  SFTNATLVLSIG--ETVVEVNDSGFLGTVPTLRTQLLTDDSMLQVHPSGLRHIRADRRV- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDIN 538
             NEW++P   ++  A  N  QV++A  GG L+Y E+   G L EV+  ++  ++ CLDI 
Sbjct: 533  -NEWRAPGRRTIVKAATNEQQVVIALSGGELIYFELSPTGQLMEVEKKEMAGDVVCLDIA 591

Query: 539  PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLL---------- 587
            P+ E    S+  AV  + D SVRI SL   ++++   +     +P S+L           
Sbjct: 592  PVPEGRQRSRFLAVASY-DSSVRILSLDPEDMMSALAVQMVSAVPESLLFIDSPAADIAG 650

Query: 588  ----CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
                 +  G  +L   L +G LL   ++  TG+L+D +   LGT+P  L   S +    +
Sbjct: 651  KGEDASGAGGLFLNIGLLNGVLLRTEVDKVTGQLSDTRTRFLGTRPPKLFAVSVRGKRSM 710

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-Q 702
             A S RP + YS   +   + ++ + + +   F S   P+      +  L I T++ + +
Sbjct: 711  LALSSRPWLGYSDMGRYTLAPLSYEALDYASGFASDQCPEGFCAVSKSMLRILTLERLGE 770

Query: 703  KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC------------------------- 737
              + +   L   PR+     +S    +    + +                          
Sbjct: 771  AFNQQVTRLRYTPRKFVVHPESNMLIVAEADHAAVPLAERRAVEDGMEMDAALTEGIEFD 830

Query: 738  ---AEESEMH------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DS 780
               A E E H             +R+LD  + +  S   LD  E   S+    FS+  + 
Sbjct: 831  EERAAEEEQHGAPKNSTGRWASCIRVLDPTSLQTSSVLELDGNEAAVSLCLLRFSNWPEE 890

Query: 781  NVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 837
             +   VGT   L   P   +    R+  F     +L+LI +  T G   +L AF G+LLA
Sbjct: 891  GMVLAVGTVQGLAFYPRTADEGYIRLYRFRDSGRQLELIHKTPTGGIPGALAAFKGRLLA 950

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHG---HILALYVQTRGDFIVVGDLMKSISLLIY 894
             +   +++Y     + G ++L  +C H     HI  L   T GD I VGDL +S+    Y
Sbjct: 951  GVGPTLRIY-----EAGKKKLLRKCEHRKLPTHIATL--ATSGDRIFVGDLQESMHYFRY 1003

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG----- 949
            K  E A+ E A D     ++A   LD D   GA+   N+F  R   + +T  E       
Sbjct: 1004 KANENALYEYADDIAPRHLTAALPLDYDTVAGADKFCNIFVTRLPRDVSTQVEEDPTGGK 1063

Query: 950  -------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
                         +LE V  +H+G+ V   +   L         G    +++ TV G IG
Sbjct: 1064 FAGAAGLLNGAPHKLEDVVNFHVGDLVTSLQRAVL-------QPGGREVLLYATVMGAIG 1116

Query: 997  VIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
             +   P  E   F   L+ +LR+    +GG +H  +R           K+ +DGDL E F
Sbjct: 1117 AMLPFPSREDVDFFSHLEMHLRQEHPPMGGRDHMSYRG-----SYFPVKDVIDGDLCEHF 1171

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L   +   I+  +  +  E+ K++E++
Sbjct: 1172 SQLPAAKQKSIADELERTPGEILKKLEDI 1200


>gi|409078983|gb|EKM79345.1| hypothetical protein AGABI1DRAFT_39860 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1236

 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 248/906 (27%), Positives = 397/906 (43%), Gaps = 154/906 (16%)

Query: 264  DG-SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
            DG SR++LGD  G   +++++ +     GL +  LGE S  +T++YL N V+Y+GS  GD
Sbjct: 326  DGLSRFILGDAYG--KMVLLSLDNLSDLGLLLIPLGEVSPPTTLTYLTNQVIYVGSHLGD 383

Query: 323  SQLIKL-----------------------------------------------------N 329
            SQL++L                                                      
Sbjct: 384  SQLVQLTSTPTTSTDKPTLPIPCDVHVIPSSSFDISAFKKGKARATSPEFDAMDLDGCDT 443

Query: 330  LQPDAKGSYVEVLERYV-------NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 382
            + P   G+ VE    Y+       N+ PI+D C+VD +  GQ Q+VTCSG    GS+  V
Sbjct: 444  VSPQESGNIVETRGSYLNVLERFKNIAPILDACLVDPD-SGQRQIVTCSGGKNTGSINAV 502

Query: 383  RNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE-DELEETE 440
            RNG    E  ++  +  +  +W+L+S  ++  D+FL++SF + + ++ +N   D +    
Sbjct: 503  RNGADFEEIVNIPGVPHVLKIWALKSRLEEAEDSFLLLSFCNSSSLIKINDSGDNISFAP 562

Query: 441  IE--------------GFCSQTQTLFCHDA----IYNQLVQVTSGSVRLVSSTSRELR-- 480
             +               F +  Q +   D     + + LV   +GS   +    + L+  
Sbjct: 563  FDNAIASGLVTVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGSGAFLLELDQGLQTY 622

Query: 481  ---NEWKSPPGYS------VNVATANASQVLLATGGGHLVYLEIGDG-----ILTEVKHA 526
               +EW +    +      +  A+ N+SQV LA  GG L  L + +      +++ +   
Sbjct: 623  IRIDEWNAKKNVADGITPEIVAASINSSQVALAISGGKLALLSVAEDKKLRVVVSTLNDC 682

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL 586
              + EIS +  +P+    ++SQ   V  W    + +F+  D     K       +P  V 
Sbjct: 683  NRQPEISAISCSPLNPARAFSQHIVVSYWESNIIEVFTPSDSGF--KSVCKSSPLPSLVS 740

Query: 587  LCAFEGI------------SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
               F                YLL  L DG +  F    +  EL +RK VSLG  P++L  
Sbjct: 741  SLRFYNFGSDQSSKGADYHPYLLAGLSDGSVATF--RWQDQELKERKIVSLGHAPVSLAV 798

Query: 635  FSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
             S   +   V AA DR  V      +L+YS + L+ ++   P N+++ P SL  A    L
Sbjct: 799  CSILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAASPLNTSSLPMSLVAATAEGL 858

Query: 694  TIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC---AEESEMHFVRLL 749
             IG I D+ KLHIRSIP G ++PR+I HQ     F +  +  +     A E    F  LL
Sbjct: 859  HIGKIKDLNKLHIRSIPFGLDNPRKITHQPLLSAFGVALVYTEPAEIGAHEVRKSFFSLL 918

Query: 750  DDQTFEFISTYPLDTFEYGCSILSCSFSDDS--NVYYCVGTAYVLPEENEPTKGRILVFI 807
            DD +FE ++ +  D  E   SI+  S   D     ++ +GT    PEE EP KGRIL+  
Sbjct: 919  DDASFEVLAKFDCDADEEIVSIIPFSAVVDGILTPFFVLGTFIFRPEEFEPDKGRILLIS 978

Query: 808  V----------EDGKLQLIAEKETKGAVYSLNAF-----NGKLLAAINQKIQLYKWMLRD 852
            +          +  +L L A  E +G VY+L          +++AA+N  + L+     D
Sbjct: 979  ISTTNNPRNPRQGYQLSLAASIEVRGCVYALTPIVDDKPVARIVAAVNSSVNLFSL---D 1035

Query: 853  DGTR------ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
              T+       L+     + + L   +   G+ + VGD + S+SLL  K  E   +  AR
Sbjct: 1036 IDTKIYPAGLHLRKMAEWNHNYLVTGLGAVGNHVFVGDQISSVSLL--KCTEEKFQTVAR 1093

Query: 907  DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
            DY   W  +VE +D+   + A +  N+FT       + +  R  L+  G YH+ + V +F
Sbjct: 1094 DYGPRWPVSVEAIDEKNVIAANDALNIFTFTL----SRNLGRSVLDCTGNYHIADLVTKF 1149

Query: 967  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY-LFLEKLQTNLRKVIKGVGG 1025
              GSLV           P  +F T +G IGVI ++ +E   + L  LQ N+  +I  VGG
Sbjct: 1150 IRGSLVTIEQSEKADLEPEELFFTSSGCIGVIVNVKNEDVSIHLSGLQRNMSAIIPNVGG 1209

Query: 1026 LNHEQW 1031
             +H ++
Sbjct: 1210 TSHARY 1215



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 104/230 (45%), Gaps = 19/230 (8%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT-- 64
           V T H+P++V  S     ++    +L++AK  R+E++ L P G+     + +YG++A+  
Sbjct: 4   VTTFHQPSSVLSSVRCRLSTRDIEHLVVAKLNRVEVYSLQPTGVSHECSLGVYGKVASKS 63

Query: 65  ----LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
               L +   H + +  +F++         + ++  +EL       + +R  R  +    
Sbjct: 64  TRSNLVVLLAHPDPE-LIFLSYA-------ESESMPAELQLTKQLPLYERTPRAAEFFND 115

Query: 121 GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-YGCAKPTIVV 179
            ++ P  +L  +  Y G  K+I     G+ +  F++ L EL V  + FL     +  + +
Sbjct: 116 ILVHPSGKLAVVSCYIGKLKIINL-KAGRFENEFDVILPELNVFSLSFLPLPPDEYALAI 174

Query: 180 LYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP---PPL 226
           ++ D++    +   ++ L+D      P +Q +    +D L P P   PP+
Sbjct: 175 IHLDHQQRVQLLARDIDLEDVQLSSSPSTQLHSTMISDKLFPYPADNPPM 224


>gi|343429611|emb|CBQ73184.1| related to UV-damaged DNA-binding protein [Sporisorium reilianum
            SRZ2]
          Length = 1505

 Score =  275 bits (704), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 246/978 (25%), Positives = 426/978 (43%), Gaps = 174/978 (17%)

Query: 269  LLGDHAGLLHLLVITHEKE---------KVTGLKIELLGETSIAS---TISYLDNAVVYI 316
            L    +G L+LL IT             +   +++E LG TS  +    +SYL + ++ +
Sbjct: 515  LFACSSGALNLLRITMPSGGQITPSSPLQPKSMRVETLGTTSQPAGPQALSYLGDGLICV 574

Query: 317  GSSYGDSQLIK---------LNLQPDAK-------------------------------G 336
            GS+ GDS L K         + L P  +                                
Sbjct: 575  GSATGDSCLYKILQQGAEQDMPLSPKEQLLTPPSSPTQSRRRRSSQVVGASLDNTELPTA 634

Query: 337  SYVEVLERYVNLGPIVDFCVVD-------LERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 389
              + V+E + NLGP+V+F V D            Q ++VTCSGA   GS+R  R+G  + 
Sbjct: 635  GSLAVVETWQNLGPVVEFVVDDGAGGDPTCSSGAQARIVTCSGAGPSGSIREARSGASVQ 694

Query: 390  EQASVELQGIKGMWSLRSSTD-DPFDTFLVVSFISETRILAMNLEDELEE---------T 439
            + +S+ +   + +W + +  D   +   L++ F + T  L  + + +L +         T
Sbjct: 695  DVSSLSIPNAQQIWPVHAGNDASKYSVGLLLGFATSTAYLHFDAKGDLADATDRLAATGT 754

Query: 440  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS--STSRELRNEWKSPPGYSVNVATAN 497
            ++        T++  D    QL+++T     LVS    S  L ++W  P G  V  A+AN
Sbjct: 755  DLTLPTLAASTVWSSDH-QPQLLRITRSEACLVSLNDESASLLHQWVPPKGLEVTAASAN 813

Query: 498  A-SQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
               QV+LA     L++L +  G L E    QLE+E+SC+D++P+      +Q+AA G W 
Sbjct: 814  VHGQVVLALSDKTLLHLSVESGALVEKGKVQLEHEVSCVDVSPLVAG-KAAQLAACGFWQ 872

Query: 557  DISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAFEG--------------------- 592
              +++I+SLP+L  + +  +  +    +PRS+LL  F                       
Sbjct: 873  TRTIQIYSLPELAAVGQSSVVQQRFPAVPRSILLHRFASKQTDGGSDTQSKGSLSNRDAL 932

Query: 593  ISYLLCALGDGHLLNFLLNM-------KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
              +LL  LGDG L+++ L++       KT  L+D K VSLGTQ + L    +     V A
Sbjct: 933  TPHLLIGLGDGTLVSYSLSLPTHDSYSKTVGLSDAKTVSLGTQALKLDALETAAGARVVA 992

Query: 646  AS-DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
             S  RPT++Y+ +K+  Y+ +  K+   +   ++       A A    + + +I  +++ 
Sbjct: 993  VSGSRPTLVYADSKRFSYNALKYKDQRTVATLHAGQERVFAAFALSDSVELASIGALRQR 1052

Query: 705  HIRSIPLG-EHPRRICHQEQSRTFAICSL----KNQSCAEESEMHFVRLLDDQTFEFIST 759
             IR+ PLG   P  I        FA+C+     +  +   +     VR+LD  TFE +  
Sbjct: 1053 DIRTFPLGLNQPLAITQWANRGVFAVCTWAFLPRGTASKSDGPRGAVRILDQTTFETLDE 1112

Query: 760  YPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV---------ED 810
              L+  E    I         +    VGT +V  + +E T+GR++ F V         E 
Sbjct: 1113 IRLEPDERPNCI--TVLQAQGHEILVVGTGFVSEQASETTQGRLVGFDVSNGSSRTKEER 1170

Query: 811  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-LRDDGTRELQSECGHHGHIL 869
            G+L+ + E    G VYS+ + N +L AA+N ++++Y  +  R       +      G   
Sbjct: 1171 GRLRKLFEHSETGNVYSVQSINNRLAAAVNSEVKIYSVVDPRPSEVPAPRIRVRQRGSWA 1230

Query: 870  ALYVQT-----RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD-- 922
              ++         D IVVGD ++S+++L        + E ARD +  W SA ++LDD+  
Sbjct: 1231 CSFIACNLSVIEPDRIVVGDALRSMNVLHVHPYTARLTELARDCDPFWTSATDLLDDESQ 1290

Query: 923  IYLGAENNFNLFTVR------------------------------KNSEGA--TDEERGR 950
             Y+GA+ +FNL+T +                              + + G    D     
Sbjct: 1291 TYIGADISFNLYTTQRVPLSEEVKARIRRARERESERTVVQTIDPRTTRGPDMVDRYAHV 1350

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLE 1010
            ++    +H G+ +N+F   SLV   P S+    P ++F T  G IG++A +  ++   L 
Sbjct: 1351 MQRNAVWHYGDMINKFCRRSLVPD-PGSNAAVRPRLLFCTAAGAIGIVAHVRDDEAHLLA 1409

Query: 1011 KLQTNLRKVIKG---------VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD--LS 1059
            K++ N+  +++          VG + H  WR+   + +      FLD ++++ F+D  L 
Sbjct: 1410 KVERNILSLLESSSTAAAAGVVGNIAHSDWRTLRTDHRVQAPAGFLDANVLQMFVDGRLD 1469

Query: 1060 RTRMDEISKTMNVSVEEL 1077
            R + D++    N   E L
Sbjct: 1470 RQQRDKVLAGPNSETEAL 1487


>gi|426195893|gb|EKV45822.1| hypothetical protein AGABI2DRAFT_72896 [Agaricus bisporus var.
            bisporus H97]
          Length = 1229

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 245/916 (26%), Positives = 396/916 (43%), Gaps = 174/916 (18%)

Query: 264  DG-SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
            DG SR++LGD  G   +++++ +     GL +  LGE S  +T++YL N V+Y+GS  GD
Sbjct: 319  DGFSRFILGDAYG--KMVLLSLDNLSDLGLLLIPLGEVSPPTTLTYLTNQVIYVGSHLGD 376

Query: 323  SQLIKL-----------------------------------------------------N 329
            SQL++L                                                      
Sbjct: 377  SQLVQLTSTPTTSTDKPTLPIPCDVHVIPSSSFDISAFKKGKARATSPEFDAMDLDGSDT 436

Query: 330  LQPDAKGSYVEVLERYV-------NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 382
            + P   G+ VE    Y+       N+ PI+D C+VD +  GQ Q+VTCSG    GS+  V
Sbjct: 437  VSPQESGNIVETRGSYLNVLERFKNIAPILDACLVDPD-SGQRQIVTCSGGKNTGSINAV 495

Query: 383  RNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE-DELEETE 440
            RNG    E  ++  +  +  +W+++S  ++  D+FL++SF + + ++ +N   D +    
Sbjct: 496  RNGADFEEIVNIPGVPHVLKIWAVKSRLEEAEDSFLLLSFCNSSSLIKINDSGDNISFAP 555

Query: 441  IE--------------GFCSQTQTLFCHDA----IYNQLVQVTSGSVRLVSSTSRELR-- 480
             +               F +  Q +   D     + + LV   +GS   +    + L+  
Sbjct: 556  FDNAIASGLVTVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGSGAFLLELDQGLQTY 615

Query: 481  ---NEWKSPPGYS------VNVATANASQVLLATGGGHLVYLEIGDG-----ILTEVKHA 526
               +EW +    +      +  A+ N+SQV LA  GG L  L + +      +++ +   
Sbjct: 616  IRIDEWNAKKNVADGITPEIVAASINSSQVALAISGGKLALLSVAEDKKLRVVVSTLNDC 675

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT-------------- 572
              + EIS +  +P+    ++SQ   V  W    + +F+  D    +              
Sbjct: 676  NRQPEISAISCSPLNPARAFSQHIVVSYWESNIIEVFTPSDSGFRSVCKSSPLPSLVSSL 735

Query: 573  --------KEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
                    +   G +  P            YLL  L DG +  F    +  EL +RK VS
Sbjct: 736  RFYNFGSDQSSKGADYHP------------YLLAGLSDGSVATF--RWQDQELKERKIVS 781

Query: 625  LGTQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683
            LG  P++L   S   +   V AA DR  V      +L+YS + L+ ++   P N+++ P 
Sbjct: 782  LGHAPVSLAVCSILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAASPLNTSSLPM 841

Query: 684  SLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC---AE 739
            SL  A    L IG I D+ KLHIRSIP G ++PR+I HQ     F +  +  +     A 
Sbjct: 842  SLVAATAEGLHIGKIKDLNKLHIRSIPFGLDNPRKITHQPLLNAFGVAFVYTEPAEIGAH 901

Query: 740  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS--NVYYCVGTAYVLPEENE 797
            E    F  LLDD +FE ++ +  D  E   SI+  S   D     ++ +GT    PEE E
Sbjct: 902  EVRKSFFSLLDDASFEVLAKFDCDADEEIVSIIPFSAVVDGILTPFFVLGTFIFRPEEFE 961

Query: 798  PTKGRILVFIV----------EDGKLQLIAEKETKGAVYSLNAF-----NGKLLAAINQK 842
            P KGRIL+  +          +  +L L A  E +G VY+L          +++AA+N  
Sbjct: 962  PDKGRILLISISTTNNPRNPRQGYQLSLAASIEVRGCVYALTPIVDDKPVARIVAAVNSS 1021

Query: 843  IQLYKWMLRDDGTR------ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
            + L+     D  T+       L+     + + L   +   G  + VGD + S+SLL  K 
Sbjct: 1022 VNLFSL---DIDTKIYPAGLHLRKMAEWNHNYLVTGLGAVGSHVFVGDQISSVSLL--KC 1076

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 956
             E   +  ARDY   W  +VE +D+   + A +  N+FT       + +  R  L+  G 
Sbjct: 1077 TEEKFQTVARDYGPRWPVSVEAIDEKNVIAANDALNIFTFTL----SRNLGRSVLDCTGN 1132

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY-LFLEKLQTN 1015
            YH+ + V +F  GSLV           P  +F T +G IGVI ++ +E   + L  LQ N
Sbjct: 1133 YHIADLVTKFIRGSLVTIEQSEKADLEPEELFFTSSGCIGVIVNVKNEDVSIHLSGLQRN 1192

Query: 1016 LRKVIKGVGGLNHEQW 1031
            +  +I  VGG +H ++
Sbjct: 1193 MSAIIPNVGGTSHARY 1208



 Score = 44.7 bits (104), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 14/224 (6%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
           V T H+P++V  S     ++    +L++AK  R+E++ L P G      +    R + L 
Sbjct: 4   VTTFHQPSSVLSSVRCRLSTRDIEHLVVAKLNRVEVYSLQPTGASHECSLGKSTR-SNLV 62

Query: 67  LFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPD 126
           +   H + +  +F++         + ++  +EL       + +R  R  +     ++ P 
Sbjct: 63  VLLAHPDPE-LIFLSYA-------ESESMPAELQLTKQLPLYERTPRAAEFFNDILVHPS 114

Query: 127 CRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-YGCAKPTIVVLYQDNK 185
            +L  +  Y G  K+I     G+ +  F++ L EL V  + FL     +  + +++ D++
Sbjct: 115 GKLAVVSCYIGKLKIINL-KAGRFENEFDVILPELNVFSLSFLPLPPDEYALAIIHLDHQ 173

Query: 186 DARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP---PPL 226
               +   ++ L+D      P +Q +    +D L P P   PP+
Sbjct: 174 QRVQLLARDIDLEDVQLSSSPSTQLHSTMISDKLFPYPADNPPM 217


>gi|440300137|gb|ELP92626.1| DNA damage-binding protein, putative [Entamoeba invadens IP1]
          Length = 1086

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 260/1108 (23%), Positives = 522/1108 (47%), Gaps = 55/1108 (4%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y  T    T +TH+ +G         LI ++   ++I+ ++  GL+          I  +
Sbjct: 6    YETTVAPATAITHTVIGKLEEGPTQFLITSRNVYVDIYEMSENGLKQRYSQMFPYSITLI 65

Query: 66   ELFR-PHGEA-QDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            + +R   G++ +DF+ I T  ++  + + +  + +++      V DR+GR    G +G++
Sbjct: 66   QTYRVTEGKSIRDFVIILTSNHQLTITRLEGNTLKVVFGI--SVEDRLGRKAFYGALGVV 123

Query: 124  DPDCRLIGLHLYDGLFKVI--PFDNKGQLKEAF-NIRLEELQVLDIKFLYGCAKPTIVVL 180
              +  LI L+LY+   K+I  P  ++  L ++  ++R+++ +++ +  +        + L
Sbjct: 124  MQNKYLI-LYLYNHQIKIISLPQGDEELLSQSVKSVRIDQERIVGMHII----GDNQIAL 178

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240
            + D    + V  YEV  K  DF     ++       D  +       G  ++   ++ Y 
Sbjct: 179  HSDQNTKKTVVFYEV--KTDDFSVSNSTEYQPIENVDFFVAHNN---GFFVVQNGSLQYH 233

Query: 241  SANAFKAIPIR-PSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE 299
                 K+I +  P IT A      D +R LL D+ G  HL+ +  + E+V    +    +
Sbjct: 234  YNTNTKSINVALPQITIA-TTCFLDNNRLLLCDNTGKSHLITLRLDVEQVHYYPLPF-AK 291

Query: 300  TSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
             SI S + YLDN V++ GSS G+S LIK+  +       +EVLE + N GPI+D   +  
Sbjct: 292  LSIPSKVVYLDNGVLFWGSSGGNSYLIKIGEER------MEVLETFENRGPILDMITLHD 345

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSS----TDDPFDT 415
            E   +  ++ CS  Y  G+L+++R+G+G+N    VE +GI+ MW    +    +DD  + 
Sbjct: 346  EISKKDDLLICSNTYHQGTLKLLRSGVGVNILGEVEYRGIEKMWKCFENAGDMSDDYKEM 405

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
            +++        +     + +++  EI    +    +        +LV VT+G + +    
Sbjct: 406  YVIEGAFGSNFVHIEGRKGDVQIVEIANSVTVKGRIVGVGDFDGKLVVVTNGGISIARVH 465

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCL 535
               +  ++ S    +  V+       ++ +G   +   +    +++++K  + E EIS +
Sbjct: 466  DTIVEEQFVSTEEITHCVSEGKD---VVYSGRNTVKLFDAEKCVMSDIK--RYEEEISSI 520

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY 595
                +    +  +   VG W    + I  + D   +      G+++ +S+          
Sbjct: 521  GCYTVSSENTRERYIGVGRWEHKEIEI--IDDQGDVLDRVYIGDVVSKSIKFVGTPSTLK 578

Query: 596  LLCALGDGHLLNFLLNMKTGELTDR-----KKVSLGTQPITLRTFSSKNTTHVFAASDRP 650
            ++  LGDG ++   +  K     +      K + +G   +++   +     +     +RP
Sbjct: 579  VIIGLGDGRVVVSNIRKKNSTQMEEEHKVGKVIEVGMGGVSIDEMAIDGKMYEICVCERP 638

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 710
            T++   + K+   +VN+ E       +    P+S+ IA +  L IG+I++++ ++ +S+ 
Sbjct: 639  TLMSLDDDKIKMMSVNIGESVGFLGVHITGIPNSVLIASKESLMIGSIEEVKAINTKSLE 698

Query: 711  LGEHPRRICHQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC 769
            LG    R+      R+  + S +  ++ + ++E+HF+ L+D +  E I    LD  E+G 
Sbjct: 699  LGVFVSRVVVSSDGRSGVLLSSEIEETRSGKNEVHFINLIDLRKMEIIDKVRLDKDEHGM 758

Query: 770  SILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 829
            +I      +     Y VGTAY    E EP++GR ++F + + K+  ++ +   GAVYS+ 
Sbjct: 759  AIDVKEIEEKE--LYIVGTAYAKLGEVEPSRGRFIIFEIHEEKIIEVSNRYVDGAVYSVK 816

Query: 830  AFN---GKLLAAINQK----IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 882
             F    G  +AA  QK     Q+ + ++       ++ + G +  ++ L+V+T G  I+V
Sbjct: 817  RFENDVGNYIAATIQKKVVVYQIERKIVDGKFAVTIEEKGGANVKLIGLFVKTLGHEILV 876

Query: 883  GDLMKSISLLIY--KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
            GDLMKSIS+  +  K    A+ E  RD+ A++ +AVE +D+  ++ +++  NL    +N+
Sbjct: 877  GDLMKSISVFKFDEKATRNAVVETCRDFYASYTTAVEFMDEHCFMSSDSQGNLLVFTENT 936

Query: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
                + E+ +L+     H+GE +N    GS+ +        Q   ++FG + G IG I  
Sbjct: 937  TTTNENEKFKLQNEAHIHVGECINVMCKGSIAVMNNAMWETQKKCMLFGGICGSIGGITE 996

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGL-NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
            +  E Y  L  L++ + + +KGV    +  QW+   ++ K ++A+N +DG+++E FLDL 
Sbjct: 997  INLETYKKLFALESEMLREMKGVIECESFGQWKMVFDDWKRMEAQNVIDGNVVELFLDLP 1056

Query: 1060 RTRMDEISKTMNVSVEELCKRVEELTRL 1087
            +     I++ +  + EEL   +E +  +
Sbjct: 1057 KESQKHIAEKIGYAGEELVTVLESMNTI 1084


>gi|224104491|ref|XP_002333932.1| predicted protein [Populus trichocarpa]
 gi|222839243|gb|EEE77594.1| predicted protein [Populus trichocarpa]
          Length = 221

 Score =  269 bits (688), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 147/223 (65%), Positives = 163/223 (73%), Gaps = 28/223 (12%)

Query: 104 MGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQV 163
           M DVS RIGRPT+NGQIGIIDPDCRLIGLHLYDGLFKVIP DNKGQLK+AF++R E L  
Sbjct: 1   MEDVSGRIGRPTNNGQIGIIDPDCRLIGLHLYDGLFKVIPSDNKGQLKQAFSMRHENLDG 60

Query: 164 LDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
             I FL            QDNKDAR+VKTYEVALKDKDF+EG WSQNNLDNGA+LLIPVP
Sbjct: 61  FFILFLS----------LQDNKDARYVKTYEVALKDKDFIEGRWSQNNLDNGANLLIPVP 110

Query: 224 PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVIT 283
            P CGVLIIGEET+VYC+AN F+AIPI+P                L   H   L L+V+ 
Sbjct: 111 LPFCGVLIIGEETVVYCNANVFRAIPIKPM---------GHWWNCLSPKHMEELMLMVL- 160

Query: 284 HEKEKVTGLKIELLGETSIAST-ISYLDNAVVYIGSSYGDSQL 325
                  GLKI+LLGETSIAST ISYLDNA V+IGSSY DSQ+
Sbjct: 161 -------GLKIKLLGETSIASTIISYLDNASVFIGSSYKDSQV 196


>gi|443894313|dbj|GAC71661.1| hypothetical protein PANT_5d00006 [Pseudozyma antarctica T-34]
          Length = 1625

 Score =  265 bits (678), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 257/979 (26%), Positives = 425/979 (43%), Gaps = 196/979 (20%)

Query: 269  LLGDHAGLLHLLVITHEKEKVT----------GLKIELLGETSIAS---TISYLDNAVVY 315
            L    +G L++L +T   E V+           +K+   G +S  +    ISYL   VV 
Sbjct: 633  LFACSSGALNVLTLTLPAEAVSESSCIPIQPRSMKVATFGYSSQPAGPQAISYLGEGVVC 692

Query: 316  IGSSYGD-------------------SQLIKLNLQPDAK----GSY-------------- 338
            IGSS GD                   +QLI     P       GS+              
Sbjct: 693  IGSSTGDTLLHQVVPRDVDEAADPTGAQLISPPSSPTQSRRRSGSFQLASSSQGRTELPS 752

Query: 339  ---VEVLERYVNLGPIVDFCVVD-------LERQGQGQVVTCSGAYKDGSLRIVRNGIGI 388
               +  +E + NLGPIVDF V D            Q ++VTCSGA   GS+R VR G  +
Sbjct: 753  AGTLHTIESWQNLGPIVDFVVDDGAGGDPSASSGAQARIVTCSGAGPSGSIREVRTGASV 812

Query: 389  NEQASVELQGIKGMWSLRSS-TDDPFDTFLVVSFISETRILAMNLEDELEET--EIEGFC 445
             E  ++ +   + +W + +  T     + ++V F + T  L  +++  L +    +   C
Sbjct: 813  QEVCTLPIPNAQHIWPVHAGPTGSKQTSGILVGFATSTAYLYFDVDGNLVDATDRLAAVC 872

Query: 446  SQTQ--TLFCHDAIYNQ----LVQV--TSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
              T   TL     +       L++V  T  S+      S  L ++W  P G  +  A+AN
Sbjct: 873  RSTANPTLAASSLVDESGSALLLRVAHTDFSLFRCQGGSIALLHQWSPPSGCEITTASAN 932

Query: 498  -ASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
               Q ++A     LVYL      LTE     LE+E+SCLDI+ +      +QIAA+G W 
Sbjct: 933  DLGQCVIALSDKSLVYLTAEAESLTERGKTSLEHEVSCLDISCLSPG-EPAQIAAIGFWQ 991

Query: 557  DISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAF------EGIS------------- 594
              +++I SLPDL+ + +  +  +    +PRS+LL  F      +G S             
Sbjct: 992  ARTIQILSLPDLSPVGQSSVVQQQLPAVPRSLLLHRFASKQTRQGASRQSRTSLRNRDAL 1051

Query: 595  --YLLCALGDGHLLNFLLNMKTGE-------LTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
              +LL  LGDG L+ + +++ T E       L D K +SLGTQ + L    + +   V A
Sbjct: 1052 SPHLLIGLGDGTLITYSVSLPTDESFSRTVGLFDCKTLSLGTQALKLDAIETSSGARVVA 1111

Query: 646  AS-DRPTVIYSSNKKLLYSNVNLKEVSHMCP----------FNSAAFPDSLAIAKEGELT 694
             S  RPT++++ +K+  Y+   L+     C            N+ +  DS+ +A  G L 
Sbjct: 1112 VSGSRPTLVFADSKRFSYNA--LQHGDQRCVATLYVGAEQVLNAFSLGDSVKLASVGTL- 1168

Query: 695  IGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSL----KNQSCAEESEMHFVRLL 749
                   Q+  +R+ PLG + P  I      + FA+C+     +  +   +     VR+L
Sbjct: 1169 -------QQRDVRTFPLGLDQPLAIAQWPARQAFAVCTWAFLPRGSASGGDKPRGAVRIL 1221

Query: 750  DDQTFEFISTYPLDTFEY-GCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV 808
            D  TFE +    L+  E   C  +  ++  +      +GT Y+  +  E   GR++ F V
Sbjct: 1222 DQTTFEVLDEIRLEPDERPNCIAVLHAYGTE---MLVIGTGYIDSQSQETVSGRLVGFDV 1278

Query: 809  ---------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM--LRDDGTR- 856
                     E G+L+ + E +  G VYS+ +   +L AA+N ++++Y  +   R D +  
Sbjct: 1279 SPGSSRTKEERGRLRRLFEHDENGNVYSVQSIGNRLAAAVNSEVKIYSVIDPRRGDASSP 1338

Query: 857  --ELQSECGHHGHILALYVQT-RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
              +++         +A  +     D IVVGD ++S+++L    +   + E ARD +  W 
Sbjct: 1339 KIKIKQRGSWASSFIACSLSVVEPDRIVVGDALRSMNVLHVHPQTARVSEIARDCDPFWT 1398

Query: 914  SAVEILDD--DIYLGAENNFNLFTVRK--------------------NSEGATDEERGR- 950
            SA E+LDD    Y+GA+ +FNL+T ++                     +  A+D + G  
Sbjct: 1399 SATELLDDASQTYIGADISFNLYTTQRVLLSDEVKTRMRRAREREQERTVSASDSQGGGR 1458

Query: 951  ---------LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 1001
                     ++    +H G+ +++F   SLV     ++    P +IF T  G IGVIA +
Sbjct: 1459 DDGDQYAHVMQRSAVWHYGDMISKFCRKSLVPSA-GANAAIQPKLIFCTAAGAIGVIAHV 1517

Query: 1002 PHEQYLFLEKLQTNLRKVIKG------------VGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
              E+   L K++ N   +I+             VGG+ HE+WR+   + +      FLD 
Sbjct: 1518 RDEEAQLLAKVERNTLSLIESGGGESNAASAGVVGGIRHEEWRTLRTDHRVQSPAGFLDA 1577

Query: 1050 DLIESFLD--LSRTRMDEI 1066
             +++ F+D  L R + D I
Sbjct: 1578 GVLKMFIDGRLDRAQRDRI 1596


>gi|402582698|gb|EJW76643.1| CPSF A subunit region family protein [Wuchereria bancrofti]
          Length = 418

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/352 (41%), Positives = 206/352 (58%), Gaps = 46/352 (13%)

Query: 522 EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 581
           E+K A   Y I  +D    G+    S+I AVG WTD+SV + +LP L  + +E + G+++
Sbjct: 56  EIKGAA--YSIQSMD----GKGTLRSEICAVGYWTDLSVALRALPQLVEVVREKIAGDML 109

Query: 582 PRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
            RS++L   EG  YLL ALGDG +  F ++MKTG L D KK +LGTQPI LR F S+ + 
Sbjct: 110 SRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRCSP 169

Query: 642 --HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
             ++F  SDRP VIYSSN+KLL+SNVNL+ VS M P  + A+PD+L +     L IG ID
Sbjct: 170 VHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMTPLYAEAYPDALVLTDGHSLVIGRID 229

Query: 700 DIQKLHIRSIPLGEHPRRICHQEQSRTFAI------------------CSLKN------- 734
           DIQKLHIR++PLGE P RI +Q ++ T A+                  C+ KN       
Sbjct: 230 DIQKLHIRTVPLGESPSRIAYQPETNTIAVIVERLEFVDAMGKHHFGQCASKNAMETSSS 289

Query: 735 -----------QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 783
                      +  AEE E+  V LLD  TFE + ++ L+  E   S+ SC   +DS  Y
Sbjct: 290 RLSSMRREPTPECLAEEMEVSSVLLLDSNTFEILHSHELEGSEMAMSLTSCQLGNDSQPY 349

Query: 784 YCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNG 833
           + VGTA ++ +E E   GRI++F   +G  +++L+ EKE KGA YS+ + +G
Sbjct: 350 FVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEIKGAAYSIQSMDG 401



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 770 SILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYS 827
           S+ SC   +DS  Y+ VGTA ++ +E E   GRI++F   +G  +++L+ EKE KGA YS
Sbjct: 4   SLTSCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEIKGAAYS 63

Query: 828 LNAFNGK 834
           + + +GK
Sbjct: 64  IQSMDGK 70


>gi|388853409|emb|CCF53029.1| related to UV-damaged DNA-binding protein [Ustilago hordei]
          Length = 1508

 Score =  263 bits (671), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 260/985 (26%), Positives = 423/985 (42%), Gaps = 182/985 (18%)

Query: 269  LLGDHAGLLHLLVITHEKEKVT--------------GLKIELLGETSIAS---TISYLDN 311
            L G ++G L++L +T  ++  +               +++E LG TS  +    +SYL +
Sbjct: 512  LFGCNSGALNVLQLTLPQDAASEVVPSHSAAAPQPKSMRVETLGTTSQPAGPQALSYLGD 571

Query: 312  AVVYIGSSYGDSQLIKLNLQ---------PDAK--------------------------- 335
             +V +GS+ GDS L K+  Q         P A+                           
Sbjct: 572  GLVCVGSATGDSCLYKILQQDTSEEMDTGPGAQLLSPPSSPTQSRRRRSSLAANTTPKST 631

Query: 336  ----GSYVEVLERYVNLGPIVDFCVVD-------LERQGQGQVVTCSGAYKDGSLRIVRN 384
                G  +  +E + NLGP+VDF V D            Q ++VTCSGA   GS+R VR+
Sbjct: 632  ELPCGGSLVTIETWQNLGPVVDFTVDDGAGGDPTTSASAQARIVTCSGAGPSGSIREVRS 691

Query: 385  GIGINEQASVELQGIKGMWSLRSSTDDPFDTF-LVVSFISETRILAM----NLEDELEET 439
            G  + + +S+ +   + +WS+ +       T  L++ F + T  L      NL D  +  
Sbjct: 692  GASVQDVSSLPIPNAQQIWSVEAGDATSKQTAGLLIGFATSTAYLHFDANGNLADATDRL 751

Query: 440  EIEGFCSQTQTLFCH---DAIYNQ-LVQVTSGSVRLVS--STSRELRNEWKSPPGYSVNV 493
               G  +   TL      DA     LV+V   +  LV+    +  L  +WK   G  +  
Sbjct: 752  SAVGVDTTLPTLTASTVFDASQGPLLVRVAKDAASLVNLQDEAATLVQQWKPSAGLEITT 811

Query: 494  ATANA-SQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAV 552
            A+ N   Q+++A+    L YL + +G L E    QL++E+SCLD + +      +Q AA 
Sbjct: 812  ASVNPYGQLVIASSDKSLSYLVVEEGALIERNKIQLDHEVSCLDTSSVTAG-QAAQFAAC 870

Query: 553  GMWTDISVRIFSLPDLNLITKE---HLGGEIIPRSVLLCAFEG----------------- 592
            G W   S++IF+LP+L  + +      G   +PRS+LL  F                   
Sbjct: 871  GFWQTRSIQIFALPELAPVGESLVVQQGFAAVPRSILLHRFASKQSEASSQTKSSVGNRD 930

Query: 593  --ISYLLCALGDGHLLNFLLNMKTGE-------LTDRKKVSLGTQPITLRTFSSKNTTHV 643
              + +LL  LGDG L++F L++   +       L+D K VSLG Q + L    S     V
Sbjct: 931  ALMPHLLIGLGDGTLVSFSLSLPRDDSYSKIVGLSDCKTVSLGKQALKLDAIESWAGARV 990

Query: 644  FAAS-DRPTVIYSSNKKLLYSNVNLKEVSH--MCPFNSAAFPDSLAIAKEGELTIGTIDD 700
             A S  RPT++Y+ +K+  Y+ +  K      M          + A+A+  EL   +I  
Sbjct: 991  VAVSGSRPTLVYADSKRFSYNALKHKSQRSVTMLHVGPGRVLGAFALAESVEL--ASIGA 1048

Query: 701  IQKLHIRSIPLG-EHPRRICHQEQSRTFAICS---LKNQSCAEESEMH-FVRLLDDQTFE 755
            +++  IR+ PLG + P  I      + FA+C+   L   S  + S+    +R+LD  TFE
Sbjct: 1049 LRQRDIRTFPLGLDQPLAIAQWPNRKVFAVCTWAFLPRGSATKASKSRGAIRILDQSTFE 1108

Query: 756  FISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV------- 808
             +  + L+  E    I         +    VGT Y+   E+E   GR+L F V       
Sbjct: 1109 TLDEFRLEVDERPNCI--TVLRAQGHEMLVVGTGYISDGEHEVISGRLLGFDVSAGSIRG 1166

Query: 809  --EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM--LRDDGTRELQSECGH 864
              E G+L+ +  KE  G VYS+ + N +L  A+N ++++Y  +     D     +     
Sbjct: 1167 KEERGRLRKLFVKEQAGNVYSVQSINNRLATAVNSEVKIYSVVDPRASDEVSAPRINVVQ 1226

Query: 865  HGHILALYVQ-----TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
             G     ++         D IVVGD ++SI++L        + E ARD +  W SA E+L
Sbjct: 1227 RGSWACSFIACNLSVVEPDQIVVGDALRSINVLHVHPYTARLTEIARDCDPFWTSATELL 1286

Query: 920  DD--DIYLGAENNFNLFTVRK-------NSEGATDEERGRLEVVGE-------------- 956
            D+    Y+GA+ +FNL+T ++        +      ER     VGE              
Sbjct: 1287 DEASQTYIGADISFNLYTTQRVPLSEQVKARIRRTREREIERSVGEVNRLTTRDPNQVDR 1346

Query: 957  ----------YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 1006
                      +H G+ +N+F   SLV   P +     P ++F T  G IGVIA +  EQ 
Sbjct: 1347 YAHVMQRNAVWHYGDMINKFYRKSLVAD-PGTAAEVHPRLLFCTAAGAIGVIAHVQEEQA 1405

Query: 1007 LFLEKLQTN------------LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
              L K++ N                   V  ++H+ WR+   + +      FLD ++++ 
Sbjct: 1406 RLLAKVERNILSLIELSSSISTSNSSSVVTSISHQDWRTLRTDHRVQAPAGFLDANILQM 1465

Query: 1055 FLD--LSRTRMDEISKTMNVSVEEL 1077
            F+D  L   + D++ +  N  +E L
Sbjct: 1466 FVDGRLDSKQRDKVVQGPNSEMEAL 1490


>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
          Length = 1212

 Score =  262 bits (670), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 298/1224 (24%), Positives = 521/1224 (42%), Gaps = 172/1224 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNVT + +G F+  +E N++ A  +R+   LL P   Q     +L   I+G 
Sbjct: 10   YSLTLQPPTNVTQAVLGQFSGTKEQNIVTASGSRLT--LLRPDPSQGKVITVLSHDIFGI 67

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I ++  FR  G  +D+L +AT+  +  ++++    +      +        R    G+  
Sbjct: 68   IRSMAAFRLAGSNKDYLILATDSGRITIIEYIPAQNRFQRLHLETFGKSGVRRVIPGEYL 127

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  LI     + L  V+  +++ +L  +  +   +  VL +  +    G A P 
Sbjct: 128  ACDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSMVALDVGYANPV 187

Query: 177  IVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP- 223
               L  +  +A    T E A + +            + V   WS++ +D  A +L  VP 
Sbjct: 188  FAALEIEYTEADQDPTGEAAREAETQLVYYELDLGLNHVVRKWSES-VDPTASMLFQVPG 246

Query: 224  ----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHA 274
                P   GVL+ GEE I Y  +N  AF+  IP R   T+  +  R    G  + L   A
Sbjct: 247  GQDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRHAVSGVMHKLKGSA 304

Query: 275  GLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYI 316
            G    L+ T + +                  +V  LKI+      ++S++  L +  +Y 
Sbjct: 305  GAFFFLLQTEDGDLFKATLDMVEDTDGNPTGEVKRLKIKYFDTIPVSSSLCILKSGFLYA 364

Query: 317  GSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNLG 349
             S +G+ Q  +                +   D K  Y            + ++E   ++ 
Sbjct: 365  ASQFGNHQFYQFEKLGDDDDELEFSSDDFPTDPKAGYDAVYFHPRPLENLALVESIDSMN 424

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI   +W+L+ +
Sbjct: 425  PLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWTLKLN 484

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
              D +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV    
Sbjct: 485  RGDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKG 542

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQ 527
            +R +        NEW +P   S+  AT N  QV +A   G +VY E+ GDG L E    +
Sbjct: 543  IRHIRHGHV---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDGSLAEYDEKK 599

Query: 528  LEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
              +  ++CL +  + E    S   AVG   D +VR+ SL P+  L +K        P S+
Sbjct: 600  EMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPESTLESKSVQALTAPPSSL 658

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + A +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+ L   + + 
Sbjct: 659  AIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQVTVQG 718

Query: 640  TTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V   S RP + YS    +  L + +N  ++  +  F+S    + +   +   L I  
Sbjct: 719  RTCVIGLSSRPWLGYSDPITRGFLVTPLNYVDLEWVWNFSSEQCEEGVVGIQGQSLRIFA 778

Query: 698  IDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV---------- 746
            I+++   +  +SIPL   PRR+    +   F      N +   +     +          
Sbjct: 779  IENLGDTITQKSIPLSYTPRRLLKHPEHPMFYTIEADNNTLPPDLRAKLIAEPGVVNGDA 838

Query: 747  RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSCSF-SDDSNV 782
            R+L    F +                       + T  LD  E   S    SF S D+  
Sbjct: 839  RILPPDEFGYPKGKGRWASCISVIDPLSEEQRVLQTVDLDNNEAAVSAAIVSFASQDNES 898

Query: 783  YYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +  VGT   ++    + ++G I V+   EDG +L+ I + + +    +L  F G+LLA I
Sbjct: 899  FLIVGTGKDMIVNPRQFSEGYIHVYRFSEDGHELEFIHKTKVEEPPSALLGFQGRLLAGI 958

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
             Q +++Y   LR    R+ Q++       L + + T+G  I+VGD+   I+ ++YK    
Sbjct: 959  GQTLRIYDLGLR-QMLRKAQADVAPQ---LIVSLSTQGSRIIVGDVQHGITYVVYKPTTN 1014

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------- 949
             +     D  + W++   ++D +  +G +   N+F VR   K S+ A +E  G       
Sbjct: 1015 KLIPFVDDTISRWVTCTTMVDYESVVGGDKFGNIFLVRCPEKASQEADEESGGLHLLNTR 1074

Query: 950  --------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IAS 1000
                    RL ++G  +  +        SLV       VG    +++  +NG IGV I  
Sbjct: 1075 DYLHGTPHRLSLLGHSYTQDVPTSITKTSLV-------VGGQDVLLWSGINGTIGVFIPF 1127

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 1060
            +  E   F + L+ ++R     + G +H  +RS+      V  K  +DGDL E +  L  
Sbjct: 1128 VTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRSY-----YVPVKGVIDGDLCERYTLLPS 1182

Query: 1061 TRMDEISKTMNVSVEELCKRVEEL 1084
             +   I+  ++ SV E+ +++ ++
Sbjct: 1183 EKKQMIAGELDRSVREIERKISDI 1206


>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
          Length = 1194

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 290/1223 (23%), Positives = 531/1223 (43%), Gaps = 176/1223 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59
            ++ Y +T  K T +  S  GNF+  + + +I++    +E  LL P     L  +L    +
Sbjct: 1    MYLYNLTLQKSTAIFQSVSGNFSGSKAVEIIVSNGHALE--LLRPDDSGRLDHVLYSEAF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I ++  FR  G ++D+L + ++  +  +L+++  S  +  +   +   R G R    G
Sbjct: 59   GVIRSIAPFRLTGGSKDYLIVGSDSGRVVILEYNP-SKNVFEKVHQETFGRSGCRRIVPG 117

Query: 119  QIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCA 173
            Q    DP  R   +   +    V   +   Q K + +  LE  +   I F       G  
Sbjct: 118  QYISTDPKGRAFMIGAIEKQKLVYILNRDSQAKLSISSPLEAHKAHTIVFSMCGVDVGFE 177

Query: 174  KP---TIVVLYQDNKDARHVKT---------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
             P   TI V Y +  +   V+          YE+ L   + V   WS+  +D  A+L++ 
Sbjct: 178  NPIFATISVDYSEETNIEDVEETHNTKVLTFYELDLGLNNVVR-KWSEE-VDRSANLVVS 235

Query: 222  VP-----PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRV--------DADG 265
            VP     P   GVL+  +  + Y +   A+   +IP R  +T+    +          D 
Sbjct: 236  VPGGSDGP--GGVLVCAQGRVYYRNIGHADISVSIPRRNGMTEEKSLMIVSHASHKQRDM 293

Query: 266  SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
              +L+    G L+ + + +  E V+G++I        A+ I+ L N  +++ S +GD  L
Sbjct: 294  FFFLVQSEYGDLYKITLDYSGEMVSGMQIAYFDTFPTANCITMLKNGFLFVASEFGDHGL 353

Query: 326  -----IKLNLQPDAKGS-------YVEVLE--------RYVNLGPIVDFCVVDLERQGQG 365
                 + L+  P A  +       +  V E           +L PIVDF V DL ++G  
Sbjct: 354  YLFKSLGLDDAPTASSAGNTEMVFFEPVFEPRNLVLTATISSLSPIVDFKVADLAQEGTP 413

Query: 366  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS--------------TD 410
            Q+   SG  +  +LR++R+G+ I +    +L G   G+W++  S               +
Sbjct: 414  QMYALSGVSERANLRVLRHGLPITQMVDSQLPGTPAGIWTIPQSLTTMRNPQYQGIGTVE 473

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD--AIYNQLVQVTSGS 468
             P D ++VVSF+  T +L +   + +EE +  G  S T T+      A  + +VQ+ +  
Sbjct: 474  SPADRYIVVSFVGSTLVLGVG--ETVEEVQDSGILSTTTTILIRSMGANLDSIVQIFAQG 531

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQ 527
            +R +++  R   +EW++P   ++++A AN  QV++  GG  ++Y E+   G LTEV    
Sbjct: 532  IRHINAERRV--SEWRAPGRKTISIAAANQQQVIICIGGSEIIYFELDPAGNLTEVFKKD 589

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLL 587
            +  +I+C++  PI    + S+  A+  + D  VRI SL   N++ +  +      +   L
Sbjct: 590  MRKDINCIEFAPIPRGRTMSRFVAISDY-DGPVRILSLERDNMLNQVSMVDTDRQQVEQL 648

Query: 588  CAFE------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
            C  E                  G  +L   L +G L   +L+  TGE++D +   LG +P
Sbjct: 649  CVAELMVHEPGVDQQIVNTQRQGTLFLHIGLKNGVLKRAVLDGLTGEISDMRTRILGRRP 708

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            I       K +  V A S R  + YS+  +   + ++++ + H    +S   P+ +    
Sbjct: 709  IKFFRVKIKGSPAVLALSTRVWMCYSNLGRYEITPLSVEPLDHAASLSSDQCPEGIVATS 768

Query: 690  EGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEM---- 743
            E  L I +I+ +  L  +  IPL   P+R + H + +   +I +  N S   E E+    
Sbjct: 769  ENNLKIFSIEKLGDLFNQVQIPLSCTPKRFVVHPQTNYIVSIETEHNFSTQFEPELAQDL 828

Query: 744  -----------HFVRLLD---DQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA 789
                         +R+LD   +QT + +S   L   E   SI +  F  +  V   VG A
Sbjct: 829  EMPRAGKGKWKSVIRILDPVSNQTLDLVS---LTNNEAAFSIGTVMF-QEGEVMLAVGCA 884

Query: 790  ---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 846
                + P         +  F+    KL L+   ET    +++ +F GKL+A +   ++LY
Sbjct: 885  KDVQLQPRGFSSASIHLYQFVENGQKLALVHTTETDLIPHAVGSFQGKLIAGVGNVLRLY 944

Query: 847  KWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
            +      G ++L  +C +      I +  +Q++GD IVV D+ +S+    Y+  E  +  
Sbjct: 945  EL-----GKKKLLRKCENRKVPNQITS--IQSQGDRIVVSDVQESVHFFTYRRSENVLVL 997

Query: 904  RARDYNANWMSAVEILD---------------------DDIYLGAENNFNLFTVRKNSEG 942
             A D    ++++  +LD                      D  +  EN  ++ T+   S+ 
Sbjct: 998  FADDTAPRFVTSCVMLDFDTVAIADKFGTIAVVRMPPSSDTDIDIENELDIGTLTTKSKL 1057

Query: 943  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL- 1001
            A +    +LE+V  +++GE        SL+       VG    +I+ T+ G IG +    
Sbjct: 1058 ALNGAANKLELVASFYVGETCCNLTRTSLM-------VGGSEVIIYTTLGGAIGALIPFS 1110

Query: 1002 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
              E+  F  +L+  +R+  + + G +H  +RS+         KN +DGDL E +  L  T
Sbjct: 1111 SREEVDFFAQLEMQMRQEKESLCGRDHLSYRSY-----YFPVKNVIDGDLCEQYSTLDAT 1165

Query: 1062 RMDEISKTMNVSVEELCKRVEEL 1084
            +   +++ +  +  E+ K++E++
Sbjct: 1166 KQRSVAEELIRNPSEVLKKLEDI 1188


>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
          Length = 1212

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 298/1228 (24%), Positives = 519/1228 (42%), Gaps = 172/1228 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PTNVT + +G F+  +E N+I A  +R+   LL P   Q     +L   
Sbjct: 6    NMFLYSLTLQPPTNVTQAVLGQFSGTKEQNIITASGSRLT--LLRPDPSQGKVITLLSHD 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
            I+G I ++  FR  G  +D+L +AT+  +  ++++    +      +        R    
Sbjct: 64   IFGIIRSMAAFRLAGSNKDYLILATDSGRITIIEYIPAQNRFQRLHLETFGKSGVRRVIP 123

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
            G+    DP  R  LI     + L  V+  +++ +L  +  +   +  VL +  +    G 
Sbjct: 124  GEYLACDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSMVALDVGY 183

Query: 173  AKPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLI 220
            A P    L  +  +A    T E A + +            + V   WS+  +D  A LL 
Sbjct: 184  ANPVFAALEIEYTEADQDPTGEAAREAETQLVYYELDLGLNHVVRKWSEP-VDPTASLLF 242

Query: 221  PVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVD--ADGSRYLL 270
             VP     P   GVL+ GEE I Y  +N  AF+  IP R   T+   R      G  + L
Sbjct: 243  QVPGGQDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRHVVSGVMHKL 300

Query: 271  GDHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNA 312
               AG    L+ T + +                  +V  LKI+      ++S++  L + 
Sbjct: 301  KGSAGAFFFLIQTEDGDLFKATIDMVEDADGNPTGEVKRLKIKYFDTIPVSSSLCILKSG 360

Query: 313  VVYIGSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERY 345
             +Y  S +G+ Q  +                +   D K  Y            + ++E  
Sbjct: 361  FLYAASQFGNHQFYQFEKLGDDDEELEFSSDDFPTDPKAGYDAVYFHPRPLENLALVESI 420

Query: 346  VNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWS 404
             ++ P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI   +W+
Sbjct: 421  DSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWT 480

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
            L+ +  D +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV
Sbjct: 481  LKLNRGDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGEDGLIQV 538

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV 523
                +R +        NEW +P   S+  AT N  QV +A   G +VY E+ GDG L E 
Sbjct: 539  HPKGIRHIRQGQV---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDGSLAEY 595

Query: 524  KHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 581
               +  +  ++CL +  + E    S   AVG   D +VR+ SL P+  L +K        
Sbjct: 596  DEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPESTLESKSVQALTAP 654

Query: 582  PRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
            P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+ L   
Sbjct: 655  PSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVRLFQV 714

Query: 636  SSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
            + +  T V   S RP + YS    +  L + +N  ++  +  F+S    + +   +   L
Sbjct: 715  TVQGRTCVIGLSSRPWLGYSDPITRGFLVTPLNYVDLEWVWNFSSEQCEEGVVGIQGQSL 774

Query: 694  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV------ 746
             I  I+++   +  +SIPL   PRR+    +   F      N +   +     +      
Sbjct: 775  RIFAIENLGDTITQKSIPLSYTPRRLLKHPEYPMFYTIEADNNTLPPDLRAKLIAEPGVV 834

Query: 747  ----RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSCSF-SD 778
                R+L    F +                       + T  LD  E   S    SF S 
Sbjct: 835  NGDARILPPDEFGYPKGKGRWASCISVIDPLAEDQRVLQTIDLDNNEAAVSAAIVSFASQ 894

Query: 779  DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKL 835
            DS  +  VGT   ++    + ++G I V+   EDG +L+ I + + +    +L  F G+L
Sbjct: 895  DSESFLIVGTGKDMVVNPRQFSEGYIHVYRFGEDGHELEFIHKTKVEEPPSALLGFQGRL 954

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            LA I + +++Y   LR    R+ Q++       L + + T+G  I+VGD+   I+ ++YK
Sbjct: 955  LAGIGKTLRIYDLGLR-QMLRKAQADVTPQ---LIVSLSTQGSRIIVGDVQHGITYVVYK 1010

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG--- 949
                 +     D  + W++   ++D +   G +   N+F VR   K ++ A DE  G   
Sbjct: 1011 PTTNKLIPFVDDTVSRWVTCTTMVDYESVAGGDKFGNMFLVRCSEKATQEADDESGGLHL 1070

Query: 950  ------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 997
                        RL ++   +  +        SLV       VG    +++  +NG IGV
Sbjct: 1071 INTRDYLHGTPHRLSLLAHSYTQDVPTSITKTSLV-------VGGQDVLLWSGINGTIGV 1123

Query: 998  -IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 1056
             I  +  E   F + L+ ++R     + G +H  +R +      V  K  +DGDL E + 
Sbjct: 1124 FIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRGY-----YVPVKGVIDGDLCERYT 1178

Query: 1057 DLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             L   +   I+  ++ SV E+ +++ ++
Sbjct: 1179 LLPSEKKQMIAGELDRSVREIERKISDI 1206


>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 294/1243 (23%), Positives = 525/1243 (42%), Gaps = 195/1243 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59
            ++ Y +T  +PT +  +  GNF+  +   +++A+   ++  LL P     +Q +L V I+
Sbjct: 1    MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLD--LLRPDDNGRIQTILSVEIF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    G
Sbjct: 59   GAIRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKN-VFDKIHQETFGKSGCRRIVPG 117

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  V+  D   +L  +  +   +   L         G  
Sbjct: 118  QYLAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFE 177

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    +  D  +A             +H+  YE+ L   + V   WS+  +DNGA+LL+
Sbjct: 178  NPIFAAIELDYSEADQDSTGLAASEAQKHLTFYELDL-GLNHVSRKWSEQ-VDNGANLLV 235

Query: 221  PVP---PPLCGVLIIGEETIVY---CSANAFKAIPIRPSITKAYGRVDADGSR------- 267
             VP       GVL+  E  ++Y           IP R  +    G +    +        
Sbjct: 236  TVPGGGDGPSGVLVCAENFVIYKNQAHPEVRAVIPRRTDLPAERGVLIVSAAMHKLKNMF 295

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             +LL    G +  + + H  ++V+ LKI+      + +++  L +  ++  S +G+  L 
Sbjct: 296  FFLLQTEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALY 355

Query: 327  KLNL---QPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLER 361
            +      + D + S   ++E                      +  +L PI+D  V +L  
Sbjct: 356  QFKSIGDEDDVEASSATLMETEQGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVSNLFE 415

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVS 420
            +   Q+ T  G     SLRI+R G+ ++E A  +L GI   +W+++ +  D FD ++VVS
Sbjct: 416  EETPQIYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNAIDEFDAYIVVS 475

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            F + T +L++   + +EE    GF   T +L       + L+QV    +R +    R   
Sbjct: 476  FTNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGR--I 531

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINP 539
            NEW++P   +++   +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P
Sbjct: 532  NEWRTPGKRTISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAP 591

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS---- 594
            + E    S+  AVG + D ++RI SL PD  +           P S+L    +       
Sbjct: 592  VPEGRQRSRFLAVGSY-DKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGED 650

Query: 595  --------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
                    +L   L +G +   +++M TG+L+D +   LG +   L     +    +   
Sbjct: 651  GADHPASLFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLCL 710

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLH 705
            S RP + Y      L + ++ + + +   F+S    + +       L I TI+ + +  +
Sbjct: 711  SSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFN 770

Query: 706  IRSIPLGEHPRRICHQEQSRTFA-ICSLKNQSCAEESEM--------------------- 743
               IPL   PR+   Q + +    I S +    AEE E                      
Sbjct: 771  ETVIPLRYTPRKFVLQPKRKLLVMIESDQGALTAEEREAARKECFESAQAGENGTESADQ 830

Query: 744  -----------------HF-------------VRLLDDQTFEFISTYPLDTFEYGCSILS 773
                             H+             +R+LD +T        L   E   SI +
Sbjct: 831  MENGGEDEDKDDPLSDEHYGYPKAESDKWASCIRVLDPRTGNTTCLLELQENEAAFSICT 890

Query: 774  CSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYS 827
             +F D +      VGTA     LP+    T G I ++  VEDG+ L+L+ + + +G   +
Sbjct: 891  INFHDKEYGTLLAVGTAKGLQFLPKRT-ITAGFIHIYRFVEDGRSLELLHKTQVEGVPLA 949

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGD 884
            L  F G+LLA I   ++LY     D G R L  +C +      I++++     D I VGD
Sbjct: 950  LCQFQGRLLAGIGPVLRLY-----DLGKRRLLRKCENKLFPNTIVSIHAYR--DRIYVGD 1002

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------- 937
            + +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR       
Sbjct: 1003 VQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSD 1062

Query: 938  -----------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
                       K  +G  +    ++E + ++H+G+ V   +  SL+        G    +
Sbjct: 1063 EIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHIGDVVTCLQKASLI-------PGGGECI 1115

Query: 987  IFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            +FGTV G +G + A    +   F   L+ ++R+    + G +H  +RS          K+
Sbjct: 1116 VFGTVMGSVGALHAFTSRDDVDFFSHLEMHMRQDHPPLCGRDHMAYRS-----AYFPVKD 1170

Query: 1046 FLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +DGDL E +    +DL R   DE+ +T      E+ K++EE+
Sbjct: 1171 VIDGDLCEQYPTLPMDLQRKIADELDRTPG----EILKKLEEV 1209


>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
 gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
          Length = 1207

 Score =  256 bits (654), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 296/1229 (24%), Positives = 524/1229 (42%), Gaps = 180/1229 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62
            Y +T  + T +  +C GNF   +   ++I +   +E  LL P     LQ +L V I+G +
Sbjct: 4    YSLTLQRATGIVCACYGNFIGGKSQEIVIGRGKILE--LLRPDDNGKLQTLLAVEIFGVV 61

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
             +L  FR  G  +D+L + ++  K  +L+++ + +               R    GQ   
Sbjct: 62   RSLAQFRLTGSHKDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFLS 121

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R  +I       L  V+  DN  +L  +  +   +   +    +    G   P  
Sbjct: 122  VDPKGRAVMIAATEKQKLVYVLNRDNAARLTISSPLEAHKSHTVVYSLVGVDCGFENPMF 181

Query: 178  VVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPP 224
              +  D  DA             +H+  YE+ L     V   WS+  +DNGA++L+ VP 
Sbjct: 182  AAIELDYSDADQDATGQAALEAQKHLTFYELDLGLNHVVR-KWSEP-IDNGANMLVTVPG 239

Query: 225  PL---CGVLIIGEETIVYCS-ANAFKA-IPIRPSITKAYGR--VDADGSR------YLLG 271
                  GVL+  +  ++Y + +   +A IP R  +    G   V A   R      +LL 
Sbjct: 240  GADGPSGVLVCADNFVIYKNQSQELRALIPRRADLPADRGVLVVSASTHRQKSVFFFLLQ 299

Query: 272  DHAGLLHLLVITHEKEK--VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK-- 327
               G +  + ++       VT LKI+      + S +  L +  ++  S +G+  L +  
Sbjct: 300  TEYGDVFKVTLSFNDTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQ 359

Query: 328  -LNLQPDAKGSYVEV----------------------LERYVNLGPIVDFCVVDLERQGQ 364
             +   PD + S   +                      ++   +L PI+D  + +L  +  
Sbjct: 360  GIGDDPDVESSSATLEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEET 419

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFIS 423
             Q+    G     +LRI+R G+ ++E A  +L G+   +W+++ S  D FD ++VVSF++
Sbjct: 420  PQIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLN 479

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
             T +L++   + +EE    GF   T +L       + L+QV    +R + S  R   NEW
Sbjct: 480  ATLVLSIG--ETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHIRSLVR--INEW 535

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGE 542
            K+P   ++    +N  QV++   GG L+Y E+   G L E++  ++  +++CL I P+ E
Sbjct: 536  KTPGKKTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPE 595

Query: 543  NPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLL------------ 587
                S+  AVG + D ++RI SL P+  +++++ + +     P S+LL            
Sbjct: 596  GRQRSRFLAVGSY-DNTIRILSLDPNDCMHILSVQMVASP--PESLLLLEVQASTGGEDG 652

Query: 588  CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
              +    +L   L +G LL   ++M TG+L+  +   LG +   L   S +    +   S
Sbjct: 653  AVYPASVFLNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLS 712

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHI 706
             RP + Y      L + ++ + + +   F+S    + +       L + TI+ + +  + 
Sbjct: 713  SRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQ 772

Query: 707  RSIPLGEHPRR-ICH---------------------QEQSRTFA-----ICSLKNQSCAE 739
             SI L   PR+ I H                     +  SR+ A     +  + NQ  +E
Sbjct: 773  TSIQLRYTPRKFILHPKRKFLVLIETDQGTFTTEEREHMSRSAAAQDNGMMEIDNQEKSE 832

Query: 740  ESEM----------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV- 782
            E  M                  +R+LD +         L   E   SI   +F D+ N+ 
Sbjct: 833  EEPMPDEQYGYPKTDSRRWVSCIRVLDPKAAATTCLLELQENEAAFSICCVNFHDNKNLG 892

Query: 783  -YYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
                VGTA  L  E  P +  +  FI     VEDG+ L+L+ +    G   +L  F G+L
Sbjct: 893  TVLAVGTAKDL--EWWPKRRSMGGFIHIYRFVEDGRSLELVHKTPIDGVPTALCQFQGRL 950

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 894
            LA I Q +++Y     D G R+L  +C +      +  + + GD I VGD+ +S   + Y
Sbjct: 951  LAGIGQILRIY-----DLGKRKLLRKCENKNFPNTITSIHSYGDRIYVGDIQESFHYVKY 1005

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE-----------GA 943
            + +E  +   A D +  W++A   +D D     +   NLF VR   +           G 
Sbjct: 1006 RRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGK 1065

Query: 944  TDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
               E+GRL       E + ++H+GE V   +  SL+        G   +VI+GTV G +G
Sbjct: 1066 IKWEQGRLNGAPNKVEEIIQFHVGEVVTCMQKASLI-------PGGGESVIYGTVMGSVG 1118

Query: 997  VIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
             +      E   F   L+ ++R+    + G +H  +RS          K+ +DGDL E +
Sbjct: 1119 ALLPFSSREDVDFFSHLEMHMRQEHPPLCGRDHMAFRS-----AYFPVKDVIDGDLCEQY 1173

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L      +I++ ++ +  E+ K++E++
Sbjct: 1174 PTLPPDLQRKIAEELDRTPGEVMKKLEDI 1202


>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
 gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
          Length = 1207

 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 296/1229 (24%), Positives = 524/1229 (42%), Gaps = 180/1229 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62
            Y +T  + T +  +C GNF   +   ++I +   +E  LL P     LQ +L V I+G +
Sbjct: 4    YSLTLQRATGIVCACYGNFIGGKSQEIVIGRGKILE--LLRPDDNGKLQTLLAVEIFGVV 61

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
             +L  FR  G  +D+L + ++  K  +L+++ + +               R    GQ   
Sbjct: 62   RSLAQFRLTGSHKDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFLS 121

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R  +I       L  V+  DN  +L  +  +   +   +    +    G   P  
Sbjct: 122  VDPKGRAVMIAATEKQKLVYVLNRDNAARLTISSPLEAHKSHTVVYSLVGVDCGFENPMF 181

Query: 178  VVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPP 224
              +  D  DA             +H+  YE+ L     V   WS+  +DNGA++L+ VP 
Sbjct: 182  AAIELDYSDADQDATGQAALEAQKHLTFYELDLGLNHVVR-KWSEP-IDNGANMLVTVPG 239

Query: 225  PL---CGVLIIGEETIVYCS-ANAFKA-IPIRPSITKAYGR--VDADGSR------YLLG 271
                  GVL+  +  ++Y + +   +A IP R  +    G   V A   R      +LL 
Sbjct: 240  GADGPSGVLVCADNFVIYKNQSQELRALIPRRADLPADRGVLVVSAATHRQKSVFFFLLQ 299

Query: 272  DHAGLLHLLVITHEKEK--VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK-- 327
               G +  + ++       VT LKI+      + S +  L +  ++  S +G+  L +  
Sbjct: 300  TEYGDVFKVTLSFNDTDMVVTELKIKYFDTFPVTSAMCVLKSGFLFAASEFGNHALYQFQ 359

Query: 328  -LNLQPDAKGSYVEV----------------------LERYVNLGPIVDFCVVDLERQGQ 364
             +   PD + S   +                      ++   +L PI+D  + +L  +  
Sbjct: 360  GIGDDPDVESSSATLEETEDGFKPIFFQPRKLKNLIQIDEGESLMPIMDMKIANLFEEET 419

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFIS 423
             Q+    G     +LRI+R G+ ++E A  +L G+   +W+++ S  D FD ++VVSF++
Sbjct: 420  PQIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTVKKSVTDEFDAYIVVSFLN 479

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
             T +L++   + +EE    GF   T +L       + L+QV    +R + S  R   NEW
Sbjct: 480  ATLVLSIG--ETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHIRSLVR--INEW 535

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGE 542
            K+P   ++    +N  QV++   GG L+Y E+   G L E++  ++  +++CL I P+ E
Sbjct: 536  KTPGKKTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIEKREMSGDVACLAIGPVPE 595

Query: 543  NPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLL------------ 587
                S+  AVG + D ++RI SL P+  +++++ + +     P S+LL            
Sbjct: 596  GRQRSRFLAVGSY-DNTIRILSLDPNDCMHILSVQMVASP--PESLLLLEVQASTGGEDG 652

Query: 588  CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
              +    +L   L +G LL   ++M TG+L+  +   LG +   L   S +    +   S
Sbjct: 653  AVYPASVFLNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQALLCLS 712

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHI 706
             RP + Y      L + ++ + + +   F+S    + +       L + TI+ + +  + 
Sbjct: 713  SRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNQ 772

Query: 707  RSIPLGEHPRR-ICH---------------------QEQSRTFA-----ICSLKNQSCAE 739
             SI L   PR+ I H                     +  SR+ A     +  + NQ  +E
Sbjct: 773  TSIQLRYTPRKFILHPKRKFLVLIETDQGTFTTEEREHMSRSAAAQDNGMMEIDNQEKSE 832

Query: 740  ESEM----------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV- 782
            E  M                  +R+LD +         L   E   SI   +F D+ N+ 
Sbjct: 833  EEPMPDEQYGYPKTDSRRWVSCIRVLDPKAAATTCLLELQENEAAFSICCVNFHDNKNLG 892

Query: 783  -YYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
                VGTA  L  E  P +  +  FI     VEDG+ L+L+ +    G   +L  F G+L
Sbjct: 893  TVLAVGTAKDL--EWWPKRRSMGGFIHIYRFVEDGRSLELVHKTPIDGVPTALCQFQGRL 950

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 894
            LA I Q +++Y     D G R+L  +C +      +  + + GD I VGD+ +S   + Y
Sbjct: 951  LAGIGQILRIY-----DLGKRKLLRKCENKNFPNTITSIHSYGDRIYVGDIQESFHYVKY 1005

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE-----------GA 943
            + +E  +   A D +  W++A   +D D     +   NLF VR   +           G 
Sbjct: 1006 RRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGK 1065

Query: 944  TDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
               E+GRL       E + ++H+GE V   +  SL+        G   +VI+GTV G +G
Sbjct: 1066 IKWEQGRLNGAPNKVEEIIQFHVGEVVTCMQKASLI-------PGGGESVIYGTVMGSVG 1118

Query: 997  VIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
             +      E   F   L+ ++R+    + G +H  +RS          K+ +DGDL E +
Sbjct: 1119 ALLPFSSREDVDFFSHLEMHMRQEHPPLCGRDHMAFRS-----AYFPVKDVIDGDLCEQY 1173

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L      +I++ ++ +  E+ K++E++
Sbjct: 1174 PTLPPDLQRKIAEELDRTPGEVMKKLEDI 1202


>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1214

 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 290/1237 (23%), Positives = 531/1237 (42%), Gaps = 189/1237 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62
            Y +T    T +  +  GNFT  +   +++A+   ++  LL P     LQ +L V ++G I
Sbjct: 4    YSLTLQPATGIVCATYGNFTGGKTQEIVVARGKVLD--LLRPDDNGKLQTLLSVEVFGAI 61

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121
             +L  FR  G  +D++ + ++  +  +L+++ E + L  +   +   + G R    GQ  
Sbjct: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKN-LFEKVHQETFGKSGCRRIVPGQYL 120

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
             +DP  R  +IG      L  V+  DN  +L  +  +   +   +         G   P 
Sbjct: 121  AVDPKGRAVMIGACEKQKLVYVLNRDNAARLTISSPLEAHKSHTIVYSITGVDCGFDNPI 180

Query: 177  IVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               +  D             N+  +H+  YE+ L     V   W++  +DNGA++L+ VP
Sbjct: 181  FAAIELDYSEADQDSTGQAANEAQKHLTFYELDLGLNHVVR-KWTE-PIDNGANMLVTVP 238

Query: 224  ---PPLCGVLIIGEETIVYCSAN---AFKAIPIRPSITKAYGRVDADGSR--------YL 269
                   GVL+  E  ++Y + N       IP R  +    G +    +         +L
Sbjct: 239  GGGDGPSGVLVCAENFVIYKNQNQPDVRAVIPRRQDLPPNRGVLIVSAATHKQKALFFFL 298

Query: 270  LGDHAGLLHLLVITHEK-EKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK- 327
            L    G +  + + ++K ++VT LKI+      + S +  L    ++  S +G+  L + 
Sbjct: 299  LQTEYGDIFKVTLDYDKDDQVTELKIKYFDTIPVTSAMCVLKAGFLFAASEFGNHSLYQF 358

Query: 328  --LNLQPDAKGS---YVEVLERYV-------------------NLGPIVDFCVVDLERQG 363
              +   P+ + S    VE  E Y                    +L PI+D  V +L  + 
Sbjct: 359  QSIGEDPEVESSSSTLVETEEGYQPVFFQPRKLKNLVQIDDIESLMPIMDMKVANLFEEE 418

Query: 364  QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFI 422
              Q+ +  G     SLRI+R G+ + E A   L G+   +W+++   +D FD ++VVSF+
Sbjct: 419  TPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSFV 478

Query: 423  SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
            + T +L++   + +EE    GF   T +L       + L+QV    +R + +  R   NE
Sbjct: 479  NATLVLSIG--ETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRADGR--INE 534

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIG 541
            WK+P   ++     N  QV++A  GG L+Y E+   G L E++   +  +++CLDI P+ 
Sbjct: 535  WKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLDIAPVP 594

Query: 542  ENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS---- 594
            E    S+  AVG + D ++RI SL PD  + +++ + +     P S+LL   +  +    
Sbjct: 595  EGRQRSRFLAVGSY-DSTIRILSLDPDDCMQILSVQAVSSP--PESLLLLEVQASTGGED 651

Query: 595  --------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
                    +L   L +G LL   ++M TG+L+D +   LG +   L +   +    +   
Sbjct: 652  GADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSALVRGRRAMLCL 711

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLH 705
            S RP + Y      L + ++ + + +   F+S    + +       L + TI+ + +  +
Sbjct: 712  SSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFN 771

Query: 706  IRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMH-------------------- 744
               +PL   PR+ I H +Q+    + S +     E+ E +                    
Sbjct: 772  QTVVPLRYTPRKFILHPKQNSLIILESDQGAFNTEDREANKKEAVEAAGYHENGKADGED 831

Query: 745  -----------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
                                          +R+LD +T        L   E   S+ + +
Sbjct: 832  EDMADGEDEEPLPDEQYGYPKAESNKWASCIRVLDPKTSTTTCLLELQENEAAFSLCAVN 891

Query: 776  FSDDSNV--YYCVGTAYVLP--EENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 829
            F D+  +     VGTA  L    + E + G I ++   ++GK L+L+ +    G   +L 
Sbjct: 892  FHDNKELGTLIAVGTAKDLQFMPKKEASGGFIHIYRFADEGKVLELVHKTPVDGVPTALC 951

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH---ILALYVQTRGDFIVVGDLM 886
             F G+LL  + Q +++Y     D G R+L  +C +      I+A++  T GD I VGD+ 
Sbjct: 952  QFQGRLLVGVGQVLRIY-----DLGKRKLLRKCENKNFPNTIIAIH--TYGDRIYVGDIQ 1004

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE----- 941
            +S   + Y+ +E  +   A D    W++A   +D D   GA+   N++ +R   +     
Sbjct: 1005 ESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADKFGNIYVMRLPQDVSEEI 1064

Query: 942  ------GATDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
                  G    E+GRL       E + ++H+GE V   +  SL+        G   +V++
Sbjct: 1065 EDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVTSLQKASLI-------PGGGESVLY 1117

Query: 989  GTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
            GT+ G +G +      E   F   L+ +LR+    + G +H  +RS          K+ +
Sbjct: 1118 GTIMGSMGALLPFSSREDVDFFSHLEMHLRQENPPLCGRDHMGFRS-----AYFPVKDVI 1172

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E +  L+     +I+  ++ +  E+ K++E++
Sbjct: 1173 DGDLCEQYPMLTSELQKKIADDLDRTPGEILKKLEDI 1209


>gi|449546293|gb|EMD37262.1| hypothetical protein CERSUDRAFT_83017 [Ceriporiopsis subvermispora B]
          Length = 1213

 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 284/1232 (23%), Positives = 520/1232 (42%), Gaps = 182/1232 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIYGRIA 63
            Y +T   PT +TH+  GNF+  ++  +++++ TR+E+    PQ   +  ++   ++G I 
Sbjct: 4    YNLTLQPPTAITHAVAGNFSGSRQQEIVVSRGTRLELLRPDPQSGKIFTVVASDVFGSIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D+  + ++  +  +L+++ ++S               R    GQ    
Sbjct: 64   SLAAFRLTGGTKDYAIVGSDSGRIVILEYEPKTSSFTKVHQETFGKSGARRIVPGQYLAT 123

Query: 124  DPDCRLIGLHLYDG--LFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYGCAK 174
            DP  R + +   +   L  ++  D    L      EA   N  +  +  LD+ F      
Sbjct: 124  DPKGRSVMIAAVEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGF----DN 179

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  DN ++    T             YE+ L     V   WS+   D  A+LL+ 
Sbjct: 180  PMFAALEVDNSESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLLVQ 237

Query: 222  VP------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------ITK 256
            VP            P   GVL+  E+ I+Y   +A +    IP R            IT 
Sbjct: 238  VPGGQLAASDRYDGP--SGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLQDADRGLIITA 295

Query: 257  AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYI 316
            A          +LL    G L+ + I HE++ V  LKI+      +AS++  L +  +++
Sbjct: 296  AVMHKMKGAFFFLLQSEEGDLYKVTIDHEEQDVKALKIKYFDTVPVASSLCILKSGFLFV 355

Query: 317  GSSYGDSQLIKL------NLQPD-AKGSY------------------------VEVLERY 345
             S +G+  L +       + +P+ +  SY                        + +++  
Sbjct: 356  ASEFGNHYLYQFQKLGDDDFEPEFSSASYPSFGMADPSIPLPPVYFRPRALDNLTLVDEM 415

Query: 346  VNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMW 403
             +L P+VD  V++L       Q+ T  G     S R++R+G+ + E  S +L GI   +W
Sbjct: 416  ESLSPVVDSKVMNLLPNSDTPQIFTACGRGPRSSFRMLRHGLDVEEVVSSDLPGIPNAVW 475

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            + +   DDP+D+++++SF++ T +L +   + +EE +  GF S   TL       + L+Q
Sbjct: 476  TTKLKEDDPYDSYIILSFVNGTLVLCIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQ 533

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 522
            V    +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E
Sbjct: 534  VHPHGIRHVLADKRV--NEWRVPQGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNE 591

Query: 523  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 581
             +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     
Sbjct: 592  YQDRKAMGSTVLALSIAEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLDTISLQALTA 650

Query: 582  PRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
            P S +  A          +  +++   L +G LL  +L+   G+LTD +   LGT+PI L
Sbjct: 651  PPSAICIADMLDAGINKTQQTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKL 710

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
                 +    + A S RP + Y+    + ++ +  + + +   F++   P+ L       
Sbjct: 711  IRVLVQRNPGILALSSRPWLNYTHQNLMHFTPLIFENLDYAWSFSAELCPEGLIGISGSV 770

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV----- 746
            L I  I  +  KL   +IPL   PR+      +    +    ++   E++    +     
Sbjct: 771  LRIFHIPKLGTKLKQDAIPLLYTPRKFIPHPTNSLLYMIEGDHRVMGEDAAARKLDELRQ 830

Query: 747  --RLLDDQTFEF-----------------------------ISTYPLDTFEYGCSILSCS 775
              R +DD+  +                              ++   LD  E   S+    
Sbjct: 831  KGREIDDEVVQLPPELFGRPKAPAGTWASCIRIINPVDAKTVNVIHLDNNEMAFSLAVVP 890

Query: 776  F-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 831
            F +    ++  VGTA   ++ P        R   F  +   L+L+ + ET     ++ AF
Sbjct: 891  FAARGGELHLVVGTAQDTFLTPRSCTSGFLRTYRFSDDGQNLELLHKTETNDVPLAVMAF 950

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
             GKL+A + + +++Y  M +    R+++++      I+AL+  T+G  I VGD+ +S+  
Sbjct: 951  QGKLVAGVGKSLRIYD-MGKKKLLRKVENKT-FSAAIVALH--TQGSHIYVGDMQESVFY 1006

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 948
             +YK  E  +   A D    W++A+ ++D +    A+   N+F  R   K SE   D+  
Sbjct: 1007 AVYKAPENRLLVFADDTQPRWITAMTMIDYNTVAAADRFGNVFVNRLDPKVSEQVDDDPT 1066

Query: 949  G---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
            G               +  ++  +H+G+ +      +LV        G    +++  ++G
Sbjct: 1067 GAGILHEKSILFGAPHKTSMLAHFHVGDLITSINKVALV-------AGGREVLLYTGLHG 1119

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DGDL 
Sbjct: 1120 TIGILMPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLTWRGY-----YVPVKAVVDGDLC 1174

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E+F  L  ++   I+  ++ +V E+ K++E+L
Sbjct: 1175 ETFARLPASKQSAIAGELDRTVGEVLKKLEQL 1206


>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
 gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  255 bits (652), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 285/1242 (22%), Positives = 526/1242 (42%), Gaps = 194/1242 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIY 59
            ++ Y +T  + T +  +  GNF+  +   +++A+   ++  LL P     LQ +L V I+
Sbjct: 1    MYLYSLTLQRATGIVSAINGNFSGGKAQEIVVARGKVLD--LLRPDENGKLQTVLSVEIF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    G
Sbjct: 59   GAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKERN-VFDKIHQETFGKSGCRRIVPG 117

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 118  QYLAVDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSVCGVDCGFD 177

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIP 221
             P    +  D  +A    T + A + +            + V   WS+  +DNGA++L+ 
Sbjct: 178  NPIFAAIELDYSEADQDSTGQAAGEAQKNLTFYELDLGLNHVSRKWSE-QVDNGANMLVT 236

Query: 222  VP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR-------- 267
            VP       G+L+  E  ++Y +    +    IP R  +    G +    +         
Sbjct: 237  VPGGGDGPSGILVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFF 296

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +LL    G +  + + HE +KV  LKI+      + S+I  L +  ++  S +G+  L +
Sbjct: 297  FLLQTEYGDIFKVTLDHENDKVKELKIKYFDTIPVTSSICVLKSGFLFAASEFGNHALYQ 356

Query: 328  LNL---QPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQ 362
                  + D + S   ++E                      +  +L P++D  V ++  +
Sbjct: 357  FQAIGEEEDVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPVMDMKVANIFDE 416

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSF 421
               Q+ +  G     SLRI+R G+ I+E A  +L G+   +W+++ + +D FD ++VVSF
Sbjct: 417  ETPQIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKRNANDEFDAYIVVSF 476

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
             + T +L++   + +EE    GF   T +L       + L+Q+    +R +    R   N
Sbjct: 477  NNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHIREDGR--IN 532

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPI 540
            EW++P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P+
Sbjct: 533  EWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPV 592

Query: 541  GENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS--- 594
             E    S+  AVG + D ++R+ SL PD  + +++ + +     P S+L    +      
Sbjct: 593  PEGRQRSRFLAVGSY-DNTIRVLSLDPDDCMQILSVQSVSAP--PESLLFLEVQASIGGE 649

Query: 595  ---------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
                     +L   L  G L   +++M TG+L+D +   LG +   L   + +    +  
Sbjct: 650  DGADHPASLFLNAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFAINVRGRRAMLC 709

Query: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKL 704
             S RP + Y      L + ++ + + +   F+S    + +       L I TI+ + +  
Sbjct: 710  LSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIFTIERLGETF 769

Query: 705  HIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE--------------------- 742
            +  +IPL   PR+   Q + +   I  S +    AEE E                     
Sbjct: 770  NETAIPLRYTPRKFVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEAAGMGENGSANAE 829

Query: 743  -----------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
                                         +  +R+LD ++        L   E   S+ +
Sbjct: 830  KMENGDDDDKDDPLSDEQYGYPKAEADRWVSCIRVLDPRSATTTCLLELQDNEAAFSVCT 889

Query: 774  CSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIAEKETKGAVY 826
             +F D +      VGTA  L  +  P +  I  FI     V+DGK L+L+ + + +G   
Sbjct: 890  VNFHDKEHGTLLAVGTAKGL--QFWPKRSLIAGFIHIYKFVDDGKSLELLHKTQVEGVPL 947

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDL 885
            +L  F G+LLA I   ++LY     D G + L  +C +     ++  + T  D I VGD+
Sbjct: 948  ALCQFQGRLLAGIGSVLRLY-----DLGKKRLLRKCENKLFPNSIVSIHTYRDRIYVGDI 1002

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-------- 937
             +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR        
Sbjct: 1003 QESFHFCKYRRDENQLYIFADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDE 1062

Query: 938  ----------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 987
                      K  +G  +    ++E + ++H+G+ VN  +  SL+        G    ++
Sbjct: 1063 IEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVNSLQKASLI-------PGGGECIM 1115

Query: 988  FGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 1046
            +GTV G +G +      +   F   L+ +LR+    + G +H  +RS          K+ 
Sbjct: 1116 YGTVMGSVGALLPFTSRDDVDFFSHLEMHLRQDHPPLCGRDHMAYRS-----AYFPVKDV 1170

Query: 1047 LDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +DGDL E F    LD  R   DE+ +T      E+ K++EE+
Sbjct: 1171 IDGDLCEQFPTLPLDAQRKIADELDRTPG----EILKKLEEV 1208


>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score =  255 bits (652), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 293/1244 (23%), Positives = 524/1244 (42%), Gaps = 197/1244 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59
            ++ Y +T  +PT +  +  GNF+  +   +++A+   ++  LL P     +Q +L V I+
Sbjct: 1    MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLD--LLRPDDNGRIQTILSVEIF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    G
Sbjct: 59   GAIRSLAQFRLMGAQKDYIVVGSDSGRIIILEYNKEKN-VFDKIHQETFGKSGCRRIVPG 117

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  V+  D   +L  +  +   +   L         G  
Sbjct: 118  QYLAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFE 177

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    +  D  +A             +H+  YE+ L   + V   WS+  +DNGA+LL+
Sbjct: 178  NPIFAAIELDYSEADQDSTGQAASEAQKHLTFYELDLG-LNHVSRKWSEQ-VDNGANLLV 235

Query: 221  PVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR------- 267
             VP       GVL+  E  ++Y +         IP R  +    G +    +        
Sbjct: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPEVRAVIPRRADLPAERGVLIVSAAMHKLKNMF 295

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             +LL    G +  + + H  ++V+ LKI+      + +++  L +  ++  S +G+  L 
Sbjct: 296  FFLLQTEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALY 355

Query: 327  KLN--------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            +                             QP    + V + ++  +L PI+D  V +L 
Sbjct: 356  QFKSIGDDDDVEASSATLMETEEGFQPVFFQPRRLKNLVRI-DQVESLMPIMDMKVSNLF 414

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVV 419
             +   Q+ T  G     SLRI+R G+ ++E A  +L GI   +W+++ +  D FD ++VV
Sbjct: 415  EEETPQIYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVV 474

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF + T +L++   + +EE    GF   T +L       + L+QV    +R +    R  
Sbjct: 475  SFTNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGR-- 530

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDIN 538
             NEW++P   S++   +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI 
Sbjct: 531  INEWRTPGKRSISKVGSNTLQVVIALSGGELIYFEMDVTGQLMEVEKHEMSGDVACLDIA 590

Query: 539  PIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS--- 594
            P+ E    S+  AVG + D ++RI SL PD  +           P S+L    +      
Sbjct: 591  PVPEGRQRSRFLAVGSY-DKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGE 649

Query: 595  ---------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
                     +L   L +G +   +++M TG+L+D +   LG +   L     +    +  
Sbjct: 650  DGADHPASLFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLC 709

Query: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKL 704
             S RP + Y      L + ++ + + +   F+S    + +       L I TI+ + +  
Sbjct: 710  LSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETF 769

Query: 705  HIRSIPLGEHPRRICHQEQSRTFA-ICSLKNQSCAEESEM-------------------- 743
            +   IPL   PR+   Q + +    I S +    AEE E                     
Sbjct: 770  NETVIPLRYTPRKFVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQAGENGTGSAD 829

Query: 744  ------------------HF-------------VRLLDDQTFEFISTYPLDTFEYGCSIL 772
                              H+             +R+LD +T        L   E   SI 
Sbjct: 830  QMENGGDDEDKDDPLSDEHYGYPKAESDKWASCIRVLDPRTSNTTCLLELQENEAAFSIC 889

Query: 773  SCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 826
            + +F D +      VGTA     LP+    T G I ++  VEDG+ L+L+ + + +G   
Sbjct: 890  TVNFHDKEYGTLLAVGTAKGLQFLPKRT-VTAGFIHIYRFVEDGRSLELLHKTQVEGVPL 948

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVG 883
            +L  F G+LLA I   ++LY     D G + L  +C +      I++++     D I VG
Sbjct: 949  ALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIISIHAYR--DRIYVG 1001

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------ 937
            D+ +S     Y+ +E  +   A D    W++A   +D D   G +   N++ VR      
Sbjct: 1002 DVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGTDKFGNIYFVRLPQDVS 1061

Query: 938  ------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
                        K  +G  +    ++E + ++H+G+ V   +  SL+        G    
Sbjct: 1062 DEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLI-------PGGGEC 1114

Query: 986  VIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 1044
            ++FGTV G +G + A    +   F   L+ ++R+    + G +H  +RS          K
Sbjct: 1115 IVFGTVMGSVGALHAFTSRDDVDFFSHLEMHMRQDHPPLCGRDHMAYRS-----AYFPVK 1169

Query: 1045 NFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            + +DGDL E +    +DL R   DE+ +T      E+ K++EE+
Sbjct: 1170 DVIDGDLCEQYPTLPMDLQRKIADELDRTPG----EILKKLEEV 1209


>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666 SS1]
          Length = 1213

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 288/1238 (23%), Positives = 513/1238 (41%), Gaps = 194/1238 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T   P+  T + VGNF+  +   +II+  TR+E  LL P      L P++   ++G 
Sbjct: 4    YNLTLQPPSAATQAIVGNFSGVRAQEIIISHGTRLE--LLRPDVQTGKLVPVVASDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+  + ++  +  +L++D ++S  +            R    GQ  
Sbjct: 62   IRSLAAFRLTGGTKDYAIVGSDSGRIVILEYDPKTSSFVKVHQETYGKSGARRIVPGQYL 121

Query: 122  IIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKFLYGC 172
              DP  R + +   +   L  ++  D    L  +  +        +  +  LD+ F    
Sbjct: 122  ATDPKGRSVMVAAVEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGLDVGF---- 177

Query: 173  AKPTIVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
              P    L  D             N   + +  YE+ L     V   WS+   D  A+LL
Sbjct: 178  ENPMFAALEVDYTESDQDPTGEAFNNADKVLTYYELDLGLNHVVRK-WSEPT-DPRANLL 235

Query: 220  IPVP------------PPLCGVLIIGEETIVYCSANAFK---AIPIR------PS----I 254
            + VP            P   GVL+  E+ I+Y   +  +    IP R      P     I
Sbjct: 236  VQVPGGQLASSDRYDGP--SGVLVCCEDHIIYRHTDVPQHRVPIPRRRHPLEDPDRGLII 293

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
            T A          +LL    G L+ + I H++E+V  +KI+      +AS++  L +  +
Sbjct: 294  TSAVMHKMKGAFFFLLQSEEGDLYKVTIEHQEEEVKAVKIKYFDTVPVASSLCILKSGFL 353

Query: 315  YIGSSYGDSQLIKL------NLQPDAKGS-------------------------YVEVLE 343
            ++ S +G+ QL +       + +P+   +                          + + +
Sbjct: 354  FVASEFGNHQLYQFQKLGDDDNEPEFSSTDYPSFGMADPSAALPRAHFRPHPLDNLALAD 413

Query: 344  RYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
               +L P++D  V++L       Q+ T  G     + R +R+G+ + E  S +L GI   
Sbjct: 414  ELESLAPVIDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEETVSSDLPGIPNA 473

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ ++  D P+D+++++SF++ T +L++   + +EE +  GF S   TL       + L
Sbjct: 474  VWTTKTREDAPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADAL 531

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L
Sbjct: 532  LQVHPHGIRHVLADRRV--NEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQL 589

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
             E +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L   
Sbjct: 590  NEYQDRKAMGSTVLALSIGEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQAL 648

Query: 580  IIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
              P S L  A          +   ++   L +G LL  +L+   G+LTD +   LGT+P+
Sbjct: 649  TAPPSALCIADMLDAGINKSQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPV 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     ++   + A S R  + Y+    + ++ +    +     F++   P+ L     
Sbjct: 709  RLIRVQIQHQPAILALSSRTWLNYTHQNLMHFTPLIFDNLDFAWSFSAELCPEGLIGITG 768

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI-----------------CSL 732
              L I  +  +  KL   SIPL   PR+      +  F I                   L
Sbjct: 769  SVLRIFQMPKLGTKLKQDSIPLSYTPRKFASHPSNSYFYIIEADHRVTGPDATAKKVAEL 828

Query: 733  KNQSCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
            ++Q    + EM                     +R++D    + ++  P+D  E   S+  
Sbjct: 829  RSQGKMVDDEMLELPAEVFGRSKAPAGTWASCIRIVDPAEGKSVAEIPIDNNEAAFSLAI 888

Query: 774  CSFSDDSNVYY-CVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 829
              FS  +N Y+  VGTA   ++ P        R   F+ +   L+L+ + ET     SL 
Sbjct: 889  VPFSVRNNEYHLVVGTAQDTFLAPRSCTSGFLRTYKFVDDGAGLELLHKTETDDIPMSLL 948

Query: 830  AFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 885
            AF G+L+A I + +++Y    K +LR   ++   S          + + T+G  I+VGD+
Sbjct: 949  AFQGRLVAGIGKALRIYDIGKKKLLRKAESKTFASAI--------ISLNTQGSRIIVGDM 1000

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 942
             +SI+  +YK  E  +   A D  A W++   ++D       +   N+F  R   K S+ 
Sbjct: 1001 QESIAYAVYKAPENKLLVFADDTQARWVTCSTMVDYTTVAAGDRFGNIFINRLDSKVSDQ 1060

Query: 943  ATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 987
              D+  G               +  ++  +H+G+ V      SLV        G    ++
Sbjct: 1061 VDDDPTGAGILHEKGILMGAPHKTAMLAHFHVGDLVTSIHKVSLV-------AGGREVLL 1113

Query: 988  FGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 1046
            +  ++G IG++  L   E   F+  L+ ++R     + G +H  WR +      V  K  
Sbjct: 1114 YTGLHGTIGMLVPLVSKEDVDFISTLEQHIRTEQTSLVGRDHLAWRGY-----YVPVKAV 1168

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +DGDL E+F  L   +   I+  ++ +V E+ K++++L
Sbjct: 1169 VDGDLCETFARLPAAKQSMIAGELDRTVSEVLKKLDQL 1206


>gi|395333071|gb|EJF65449.1| hypothetical protein DICSQDRAFT_178021 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1213

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 298/1241 (24%), Positives = 516/1241 (41%), Gaps = 200/1241 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T   PT +TH+  GNF+  +   +++++ TR+E  LL P      +  ++   ++G 
Sbjct: 4    YNLTLQPPTAITHAVAGNFSGSRTQEIVVSRGTRLE--LLRPDVQSGKVATVIASDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D++ + ++  +  +L +D ++S  +            R    GQ  
Sbjct: 62   IRSLAAFRLTGGTKDYVIVGSDSGRIVILDYDPKTSSFVKVHQETFGKSGARRIVPGQYL 121

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYGC 172
              DP  R  +I       L  ++  D    L      EA   N  +  +  LD+ F    
Sbjct: 122  ATDPKGRSVMIAAMEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGF---- 177

Query: 173  AKPTIVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
              PT   L  D             N   + +  YE+ L     V   WS+   D  A+LL
Sbjct: 178  ENPTFAALEVDYSESDQDPSGEAFNNAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLL 235

Query: 220  IPVP------------PPLCGVLIIGEETIVYCSANAFK---AIPIR------PS----I 254
            + VP            P   GVL+  E+ I+Y   +A +    IP R      P     I
Sbjct: 236  VQVPGGQLATSDRYDGP--SGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDPERGLII 293

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
            T A          +LL    G L+ + I HE++ V  LKI+      +AS +  L +  +
Sbjct: 294  TAAVMHKMKGAFFFLLQSEEGDLYKVTIEHEEQDVKALKIKYFDTVPVASGLCILKSGFL 353

Query: 315  YIGSSYGDS---QLIKL---NLQPD-AKGSY------------------------VEVLE 343
            ++ S +G+    Q  KL   + +P+ + G Y                        + +++
Sbjct: 354  FVASEFGNHYFYQFQKLGDDDNEPEFSSGDYPSYGMADPTAALPRAYFRPRALDNLTLVD 413

Query: 344  RYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
               +L PI+D  V++L       Q+    G     + R +R+G+ + E  S +L GI   
Sbjct: 414  ELESLCPILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEEVVSSDLPGIPNA 473

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ +   DDP+D+++++SF++ T +L +   + +EE +  GF S   TL       + L
Sbjct: 474  VWTTKLKEDDPYDSYIILSFVNGTLVLCIG--ETIEEVQDTGFLSSAPTLAVQQIGADAL 531

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R V S  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L
Sbjct: 532  LQVHPHGIRHVLSDRRV--NEWRVPSGKTIVCATTNKRQVVVALSSAELVYFELDLDGQL 589

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
             E +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L   
Sbjct: 590  NEYQDRKAMGSTVLALSIAEVPEGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQAL 648

Query: 580  IIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
              P S +  A          +  +++   L +G LL  +L+   G+LTD +   LGT+PI
Sbjct: 649  TAPPSAICIADMLDAGINKTQPTTFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPI 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L   + +    + A S RP + Y+    + ++ +  + + +   F++    + L     
Sbjct: 709  RLLRVNIQRNPAILALSSRPWLNYTHQNFMHFTPLIFENLDYAWSFSAELCQEGLIGISG 768

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRRI-----------------CHQEQSRTFAICSL 732
              L I  I  +  KL   SIPL   PR++                    E++    +  L
Sbjct: 769  SLLRIFQIPKLGTKLKQDSIPLSYTPRKLIPHPHNGLLYLIEGDHRVMSEEAAAKQLQQL 828

Query: 733  KNQSCAEESEM----------------------HFVRLLDDQTFEFISTYPLDTFEYGCS 770
            +    A + EM                        +  LD QT   I    LD  E   S
Sbjct: 829  RESGRAVDEEMVNLPPEQFGRPKAPAGTWASCIRIISPLDAQTVNVIH---LDNNEAAFS 885

Query: 771  ILSCSFSDDSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVY 826
            +    F+  +N ++  VGTA   ++ P        R   F  +   L+L+ + ET     
Sbjct: 886  LAIVPFAAKNNELHLVVGTAQDTFLAPRSCTSGFLRTYRFTDDGRNLELLHKTETNDVPL 945

Query: 827  SLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 882
            ++ AF GKL+A + + ++LY    K +LR    + L S          + + T+G  I++
Sbjct: 946  AIMAFQGKLVAGVGKALRLYDIGKKKLLRKVENKTLGSTI--------VTLNTQGSRIII 997

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KN 939
            GD+ +S+   +YK  E  +   A D    W++A  +LD +  + ++   N+F  R   K 
Sbjct: 998  GDMQESVFYAVYKPPENRLLVFADDVQPRWVTATTMLDYNTVVASDRFGNVFVNRLDAKI 1057

Query: 940  SEGATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
            S+   D+  G               +  ++  +H+G+ V      SLV        G   
Sbjct: 1058 SDQIDDDPTGAGILHEKGVLFGAPHKTAMLAHFHIGDIVTSLNKISLV-------AGGRE 1110

Query: 985  TVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
             +++  ++G IG++   +  E    L  L+ ++R     + G +H  WR +      V  
Sbjct: 1111 VILYTCLHGTIGILVPFVSKEDVDLLTTLEQHMRTEQLSLVGRDHLAWRGY-----YVPV 1165

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            K  +DGDL ESF  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1166 KAVVDGDLCESFAKLPANKQSSIAGELDRTVGEVLKKLEQL 1206


>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
 gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
          Length = 1214

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 290/1241 (23%), Positives = 525/1241 (42%), Gaps = 191/1241 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPI 58
            ++ Y +T  + T +  +  GNF+  +   +++A+   ++  LL P      LQ +L V I
Sbjct: 1    MYLYNLTLQRATGIITAINGNFSGGKTQEIVVARGKVLD--LLRPDENSGKLQTILSVEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDN 117
            +G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    
Sbjct: 59   FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERN-VFDKIHQETFGKSGCRRIVP 117

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
            GQ   IDP  R  +IG      L  V+  D   +L  +  +   +   +         G 
Sbjct: 118  GQYLAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGF 177

Query: 173  AKPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLI 220
              P    +  D  +A    T + A + +            + V   WS+  +DNGA++L+
Sbjct: 178  DNPIFAAIELDYSEADLDSTGQAANEAQKVLTFYELDLGLNHVSRKWSE-QVDNGANMLV 236

Query: 221  PVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGR--VDADGSR----- 267
             VP       GVL+  E  ++Y +    +    IP R  +    G   V A   R     
Sbjct: 237  TVPGGGDGPSGVLVCAENFVIYKNEGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMF 296

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             +LL    G +  + + HE +KV  LKI+      + S++  +    ++  S +G+  L 
Sbjct: 297  FFLLQTEYGDIFKVTLDHENDKVKELKIKYFDTIPVTSSMCVMKLGFLFAASEFGNHALY 356

Query: 327  KLNL---QPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLER 361
            +      + D + S   ++E                      +  +L PI+D  + +L  
Sbjct: 357  QFQAIGEEADVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKIANLFD 416

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVS 420
            +   Q+ +  G     SLRI+R G+ I+E A  +L G+   +W+++ + +D FD +++VS
Sbjct: 417  EETPQIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIIVS 476

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            F + T +L++   + +EE    GF   T +L       + L+QV    +R +    R   
Sbjct: 477  FNNATLVLSIG--ETVEEVNNSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGR--I 532

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINP 539
            NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P
Sbjct: 533  NEWRTPGKRTIVKVGSNRVQVVIALSGGELIYFEVDITGQLMEVEKHEMSGDVACLDIAP 592

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS-- 594
            + E    S+  AVG + D ++RI SL PD  + +++ + +     P S+L    +     
Sbjct: 593  VPEGRQRSRFLAVGSF-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVGR 649

Query: 595  ----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
                      +L   L  G L   L++M TG+L+D +   LG +   L +   +    + 
Sbjct: 650  EDVADHPASLFLNAGLQSGVLFRTLVDMVTGQLSDSRSRFLGLRAPKLFSILVRGRRAML 709

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QK 703
              S RP + Y      L + ++ + +     F+S    + +       L I TI+ + + 
Sbjct: 710  CLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRIFTIERLGET 769

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE-------------------- 742
             +  +IPL   PR+   Q + +   I  S +    AEE E                    
Sbjct: 770  FNETAIPLRYTPRKFVLQPKKKLLVIVESDQGAYTAEEREAAKKECFEAAGMGENGSANA 829

Query: 743  ------------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSIL 772
                                          +  +R+LD +T        L   E   S+ 
Sbjct: 830  EQMENGDDEDKDDPLSDEQYGYPKAEAEKWVSCIRVLDPRTAATTCLLELQDNEAAFSVC 889

Query: 773  SCSFSD-DSNVYYCVGTAYVLP--EENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYS 827
            + +F D +      VGTA  L    +   + G I ++  V+DG+ L+L+ + + +G   +
Sbjct: 890  TVNFHDKEHGTLLAVGTAKGLQFWPKRSLSAGFIHIYKFVDDGRALELLHKTQVEGVPLA 949

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLM 886
            L+ F G+LLA I   ++LY     D G + L  +C +     ++  +QT  D I VGD+ 
Sbjct: 950  LSQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNSIVSIQTYRDRIYVGDIQ 1004

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--------- 937
            +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR         
Sbjct: 1005 ESFHFCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNIYFVRLPQDVSDEI 1064

Query: 938  ---------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
                     K  +G  +    ++E + ++H+G+ V      SL+        G    +I+
Sbjct: 1065 EEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVTSLSKASLI-------PGGGECIIY 1117

Query: 989  GTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
            GTV G +G +      +   F   L+ +LR+    + G +H  +RS          K+ +
Sbjct: 1118 GTVMGSVGALLPFTSRDDVDFFSHLEMHLRQDHPPLCGRDHMAYRS-----AYFPVKDVI 1172

Query: 1048 DGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E F    LD  R   DE+ +T      E+ K++EE+
Sbjct: 1173 DGDLCEQFPTLPLDAQRKIADELDRTPG----EILKKLEEV 1209


>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1214

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 287/1239 (23%), Positives = 530/1239 (42%), Gaps = 193/1239 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62
            Y +T    T +  +  GNFT  +   +++A+   ++  LL P     LQ +L V I+G I
Sbjct: 4    YNLTLQPATGIVCATYGNFTGGKSQEIVVARGKVLD--LLRPDDNGKLQTLLSVEIFGAI 61

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121
             +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    GQ  
Sbjct: 62   RSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKN-IFEKVHQETFGKSGCRRIVPGQYL 120

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
             +DP  R  +IG      L  V+  DN  +L  +  +   +   +         G   P 
Sbjct: 121  AVDPKGRAVMIGACEKQKLVYVLNRDNAARLTISSPLEAHKSHTIVYSITGVDCGFDNPI 180

Query: 177  IVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               +  D             N+  +H+  YE+ L     V   W++  +DNGA++L+ VP
Sbjct: 181  FAAIELDYSEADQDSTGQAANEAQKHLTFYELDLGLNHVVR-KWTE-PIDNGANMLVTVP 238

Query: 224  ---PPLCGVLIIGEETIVYCSANA---FKAIPIRPSITKAYGRVDADGSR--------YL 269
                   GVL+  E  ++Y + N       IP R  +    G +    +         +L
Sbjct: 239  GGGDGPSGVLVCAENFVIYKNQNQPDIRAVIPRRQDLPPNRGVLIVSAATHKQKALFFFL 298

Query: 270  LGDHAGLLHLLVITHEK-EKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L    G +  + + ++K ++VT LKI+      + S +  L +  ++  S +G+  L + 
Sbjct: 299  LQTEYGDIFKVTLDYDKDDQVTELKIKYFDTIPVTSAMCVLKSGFLFAASEFGNHSLYQF 358

Query: 329  N--------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ 362
                                        QP    + V++ +   +L PI+D  V ++  +
Sbjct: 359  QSIGEEPEVESSSSTLVETEEGYQPIFFQPRKLKNLVQI-DDIESLMPIMDMKVANIFEE 417

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSF 421
               Q+ +  G     SLRI+R G+ + E A   L G+   +W+++   +D FD ++VVSF
Sbjct: 418  ETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVVSF 477

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            ++ T +L++   + +EE    GF   T +L       + L+QV    +R + +  R   N
Sbjct: 478  VNATLVLSIG--ETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRADGR--IN 533

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPI 540
            EWK+P   ++     N  QV++A  GG L+Y E+   G L E++   +  +++CL I P+
Sbjct: 534  EWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLHIAPV 593

Query: 541  GENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS--- 594
             E    S+  AVG + D ++RI SL PD  + +++ + +     P S+LL   +  +   
Sbjct: 594  PEGRQRSRFLAVGSY-DSTIRILSLDPDDCMQILSVQAVSSP--PESLLLLEVQASTGGE 650

Query: 595  ---------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
                     +L   L +G LL   ++M TG+L+D +   LG +   L +   +    +  
Sbjct: 651  DGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSARVRGRRAMLC 710

Query: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKL 704
             S RP + Y      L + ++ + + +   F+S    + +       L + TI+ + +  
Sbjct: 711  LSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETF 770

Query: 705  HIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMH------------------- 744
            +   +PL   PR+ I H +Q     + S       EE E +                   
Sbjct: 771  NQTVVPLRYTPRKFILHPKQKSLIILESDLGAFSTEEREANKKEAVKATGGRDDEKANGE 830

Query: 745  ------------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSC 774
                                           +R+LD +T        L   E   S+ + 
Sbjct: 831  DEEMADGENEDPLPDEQYGYPKAESNKWASCIRVLDPKTSTTTCLLELQENEAAFSLCAV 890

Query: 775  SFSDDSNV--YYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYS 827
            +F D+  +     VGTA     +P++ E + G I ++  VE+G+ L+L+ +    G   +
Sbjct: 891  NFHDNKELGTLIAVGTAKNMQFMPKK-ESSGGFIHIYRFVEEGRILELVHKTPVDGVPTA 949

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH---ILALYVQTRGDFIVVGD 884
            L  F G+LL  + Q +++Y     D G R+L  +C +      I+A++  T GD I VGD
Sbjct: 950  LCQFQGRLLVGVGQVLRIY-----DLGKRKLLRKCENKNFPNTIIAIH--TYGDRIYVGD 1002

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE--- 941
            + +S   + Y+ +E  +   A D    W++A   +D D   GA+   N++ +R   +   
Sbjct: 1003 IQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADKFGNVYVMRLPQDVSE 1062

Query: 942  --------GATDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
                    G    E+GRL       E + ++H+GE V   +  SL+        G   +V
Sbjct: 1063 EIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVTSLQKASLI-------PGGGESV 1115

Query: 987  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            ++GT+ G +G +      E   F   L+ +LR+    + G +H  +RS          K+
Sbjct: 1116 LYGTIMGSVGALLPFSSREDVDFFSHLEMHLRQENPPLCGRDHMAFRS-----AYFPVKD 1170

Query: 1046 FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +DGDL E +  L+     +I+  ++ +  E+ K++E++
Sbjct: 1171 VIDGDLCEQYPMLTSELQRKIADDLDRTPGEVLKKLEDI 1209


>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
 gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 286/1240 (23%), Positives = 528/1240 (42%), Gaps = 189/1240 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGR 61
            ++ Y +T  + T +  +  GNF+  +   +++A+   +++      G +Q +L V I+G 
Sbjct: 1    MYLYSLTLQRATGIVSAINGNFSGGKTQEIVVARGKVLDLIRPDDSGKIQTLLSVEIFGA 60

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I +L  FR  G  +D++ + ++  +  +L+++ + + +  +   +   + G R    GQ 
Sbjct: 61   IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKDKN-VFDKIHQETFGKSGCRRIVPGQY 119

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              IDP  R  +IG      L  V+  D   +L  +  +   +   +         G   P
Sbjct: 120  LAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNP 179

Query: 176  TIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
                +  D  +A             +H+  YE+ L   + V   WS+  +DNGA++L+ V
Sbjct: 180  IFAAIELDYSEADQDSTGVAASEAQKHLTFYELDLG-LNHVSRKWSEP-VDNGANMLVTV 237

Query: 223  P---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR--------Y 268
            P       GVL+  E  ++Y +    +    IP R  +    G +    +         +
Sbjct: 238  PGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKQKTMFFF 297

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            LL    G +  + + H  + V  LKI+      + +++  L +  ++  S +G+  L + 
Sbjct: 298  LLQTEYGDIFKVTLEHNNDSVKELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHSLYQF 357

Query: 329  NL---QPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQG 363
                   D + S   ++E                      +  +L PI+D  +++L  + 
Sbjct: 358  QAIGEDADVESSSATLMETEEGFQPVFFQPRRLKNLMRIDQVESLMPIMDMKIINLFEEE 417

Query: 364  QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFI 422
              Q+ T  G     SLRI+R G+ I+E A  EL G+   +W+++ + +D FD ++VVSF 
Sbjct: 418  TPQIFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNINDEFDAYIVVSFA 477

Query: 423  SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
            + T +L++   + +EE    GF   T +L       + L+QV    +R +    R   NE
Sbjct: 478  NATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGR--INE 533

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIG 541
            W++P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P+ 
Sbjct: 534  WRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVP 593

Query: 542  ENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVL----LCAFEGIS 594
            E    S+  AVG + D ++RI SL PD  + +++ + +     P S+L    L +  G  
Sbjct: 594  EGRQRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSAA--PESLLFLEVLASVGGED 650

Query: 595  --------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
                    +L  AL  G L   +++M TG+L+D +   LG +   L +   +    +   
Sbjct: 651  GADHPASLFLNAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVVLRGRRAILCL 710

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLH 705
            S RP + Y      L + ++ + + +   F+S    + +       L + TI+ + +  +
Sbjct: 711  SSRPWLGYIHQGHFLLTPLSYETLEYASSFSSDQCAEGVVAVAGNFLRVFTIERLGETFN 770

Query: 706  IRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESEM--------------------- 743
               IPL   PR+   Q + +   +  S +    AEE E                      
Sbjct: 771  ETVIPLRYTPRKFVLQPRRKLLVVIESDQGAFTAEEREAAKKECFEAAGAGENGNGTMDQ 830

Query: 744  -----------------HF-------------VRLLDDQTFEFISTYPLDTFEYGCSILS 773
                             H+             +R+LD ++        L   E   S+ +
Sbjct: 831  MENGGDDEDKDDPLSDEHYGYPKAESEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCT 890

Query: 774  CSFSD-DSNVYYCVGTAYVLP--EENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSL 828
             +F D +      VGTA  L    +     G I ++  +EDGK L+L+ + + +G   +L
Sbjct: 891  VNFHDKEYGTLLAVGTAKGLQFFPKRSLVAGYIHIYRFLEDGKSLELLHKTQVEGVPLAL 950

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMK 887
              F G+LLA +   ++LY     D G R L  +C +      +  +QT  D I VGD+ +
Sbjct: 951  AQFQGRLLAGLGSVLRLY-----DLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQE 1005

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---------- 937
            S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR          
Sbjct: 1006 SFHYCKYRRDENQLYIFADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIE 1065

Query: 938  --------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
                    K  +G  +    ++E + ++H+G+ V   +  SL+        G    +++G
Sbjct: 1066 EDPTGGKIKWEQGKLNGAPNKVEEIIQFHIGDVVTSLQKASLI-------PGGGECILYG 1118

Query: 990  TVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            TV G +G + A    +   F   L+ ++R+    + G +H  +RS          K+ +D
Sbjct: 1119 TVMGSLGALHAFTSRDDVDFFSHLEMHMRQEHPPLCGRDHMGYRS-----AYFPVKDVID 1173

Query: 1049 GDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL E F    LD+ R   DE+ +T      E+ K++EE+
Sbjct: 1174 GDLCEQFPSLPLDMQRKIADELDRTPG----EILKKLEEV 1209


>gi|71016864|ref|XP_758932.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
 gi|46098463|gb|EAK83696.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
          Length = 1549

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 254/1002 (25%), Positives = 407/1002 (40%), Gaps = 217/1002 (21%)

Query: 292  LKIELLGETSIAS---TISYLDNAVVYIGSSYGDSQLIKL----------------NLQP 332
            L++E LG TS  +    +SYL   +V +GS+ GD+ L ++                 L P
Sbjct: 551  LRVEALGTTSQPAGPQALSYLGQGLVCVGSATGDNCLYRIIGQNASQKMPASSSEQVLTP 610

Query: 333  DAK------------------------GSYVEVLERYVNLGPIVDFCVVD-------LER 361
             +                         GS V  LE + NLGP+VDF V D          
Sbjct: 611  PSSPTQSRSMLSHAASSSRDHSELSTGGSLVN-LETWQNLGPVVDFVVDDGAGGDPTYAS 669

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP--FDTFLVV 419
              Q ++VTCSG    GS+R  R+G  + + AS+ +   + +WS+ +  DD       L+V
Sbjct: 670  SAQARIVTCSGLGPTGSVREARSGASVRDIASLPIPNAEQIWSVDAGVDDASKLTIGLLV 729

Query: 420  SFISETRILAMNLEDELEETEIEGFCS---------QTQTLFCHDAIYNQLVQV--TSGS 468
             F + T  L  N + +L +   +   +            T+  HD    QL++V  T  S
Sbjct: 730  GFATSTAYLHFNADGDLTDATDQLVAAGANVSLPTIAATTVLFHDR-SPQLLRVDRTGAS 788

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANA-SQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
            +  V   S  + ++W+ P    V  A+ N+  Q +LA     L+YL   DG L E     
Sbjct: 789  LFSVQDASISILDQWRPPNELEVTSASVNSVGQAILALSDKSLLYLTDEDGALIERNKKM 848

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI--IPRSV 585
            LE E+SC+DI+P+    + +Q+ A G W       ++LPDL ++ +     E   +PRS+
Sbjct: 849  LEDEVSCVDISPLIAGKA-AQLVACGFWGRDVFDFYNLPDLEVVPR-GFAAEFSSVPRSI 906

Query: 586  LLCAFEGI---------------------SYLLCALGDGHLLNFLLNMKTGE-------- 616
            LL  FE                       +YLL  LGDG L++F L     +        
Sbjct: 907  LLHRFESSQPEKASDAEFEFWGFNPNPLDAYLLIGLGDGTLVSFRLGGIVADGNAYVPVS 966

Query: 617  LTDRKKVSLGTQPITLRTFSSKNTTHVFAAS-DRPTVIYSSNKKLLYSNVNLKE---VSH 672
            L D K ++LGTQ + L    +     V A S  RPT++Y  +K+  YS +  K+   V+ 
Sbjct: 967  LYDAKTITLGTQALKLDAIKTSTGARVVAISGSRPTLVYHDSKRFSYSALKYKDPRSVAT 1026

Query: 673  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICS 731
            +C      F     +     L + +I  + +  IR+ PLG   P  I      + FA+C+
Sbjct: 1027 VCAGPGRVF---AVVVLTDSLELTSISALGQRDIRTFPLGLNQPLAIAQWADRKVFAVCT 1083

Query: 732  L----KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG 787
                 +  +  +E     VR+LD  TFE +    L+  E    I         +    VG
Sbjct: 1084 WTFLPRGSASKQEGSRGAVRILDHTTFELLDEIRLEPDERPNCITLLDLP--GHKMLVVG 1141

Query: 788  TAYVLPEENEPTKGRILVFIV---------EDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            T YV  + +E  +GR++ F V         E G+L+ + E    G VY + +    L AA
Sbjct: 1142 TGYVSKQSSETVRGRLVAFDVSTGSSRTKEERGRLRQLFECSENGNVYQVQSTRYHLCAA 1201

Query: 839  INQKIQLYKWM-------LRDDGTRELQSECGHHGHILALYVQT-----RGDFIVVGDLM 886
            +N +I+ Y           R  G      E    G     ++         D +VVGD +
Sbjct: 1202 VNSEIKTYSITNCKDMSDKRPSGGPRRPYEVRQEGSWACSFIACNLSAIEPDRLVVGDAL 1261

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD--IYLGAENNFNLFTVRKNSEGAT 944
            +S+++L      G + E ARD + +W SA E+LD +   Y+GA+ +FNL+T ++     +
Sbjct: 1262 RSMNVLNVDRYTGRLTEIARDCDPSWTSATELLDSETQTYIGADISFNLYTTQRMP--MS 1319

Query: 945  DEERGR-------------------------------LEVVGEYHLGEFVNRFRHGSL-V 972
            +E R                                 ++    +H G+ +N+FR     V
Sbjct: 1320 EEVRTSIRRARERETERSVSLAYPRTLRDTDDCYAHVMQRKAVWHYGDMINKFRQSEFWV 1379

Query: 973  MRL------------------------------------PDSDVGQIPTVIFGTVNGVIG 996
            +RL                                    P  D    P ++F T  G IG
Sbjct: 1380 VRLVPRHPIPSHPILSNLTLTLIFSFARRLISTASLVSDPGPDAAVRPKLVFCTAAGAIG 1439

Query: 997  VIASLPHEQYLFLEKLQTNLRKVIKG---------VGGLNHEQWRSFNNEKKTVDAKNFL 1047
            VIA +  ++   L K++ N+  +I+          +G + H  WR+   + +      FL
Sbjct: 1440 VIAHVRDDEAQILAKVERNILSLIESPTEAASAGVIGNIAHSDWRTLRTDHRVQAPAGFL 1499

Query: 1048 DGDLIESFLD--LSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            D D+++ FLD  L   +   +    N   E L  R E + +L
Sbjct: 1500 DADVLQMFLDGRLDHNQRYRVVHGPNSEAEALGVRSEVVEQL 1541


>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
          Length = 1212

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 298/1235 (24%), Positives = 517/1235 (41%), Gaps = 189/1235 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T   PT +TH+  GNF+  ++  +I+++ TR+E  LL P      +  ++   ++G 
Sbjct: 4    YNLTLQPPTAITHAIAGNFSGSRQQEIIVSRGTRLE--LLRPDVQSGKVSTVIASDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+  + ++  +  +L +D ++S               R    GQ  
Sbjct: 62   IRSLAAFRLTGGTKDYAVVGSDSGRIVILDYDPKTSSFTKVHQETYGKSGARRIVPGQYL 121

Query: 122  IIDPDCRLIGLHLYDG--LFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYGC 172
              DP  R + +   +   L  ++  D    L      EA   N  +  +  LD+ F    
Sbjct: 122  ATDPKGRSVMISAVEKAKLVYILNRDAAANLTISSPLEAHKNNSIIHHIVGLDVGF---- 177

Query: 173  AKPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLL 219
              P    L  D  D+    T             YE+ L     V   WS+   D  A+LL
Sbjct: 178  DNPMFAALEVDYSDSDQDPTGEAFNNAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLL 235

Query: 220  IPVP------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------I 254
            + VP            P   GVL+  E+ I+Y   +A +    IP R            I
Sbjct: 236  VQVPGGQLASSDRYDGP--SGVLVCCEDHIIYRHMDAPQHRIPIPRRQHPLADTHRGLII 293

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIAST--------- 305
            T A          +LL    G L+ + I HE + V  LKI+      IAS          
Sbjct: 294  TAAVMHKMKGAFFFLLQSEEGDLYKVTIEHEDQDVRALKIKYFDTVPIASIEYNFNCRIC 353

Query: 306  ISYL---------------DNAVVYIGSSYGD-------SQLIKLNLQPDAKGSYVEVLE 343
            +SY+               DN   +  +S+         S L     +P    + + +++
Sbjct: 354  VSYIILESYLYQFQKLGDDDNEPEFSSTSFPSFGMADPSSPLPHAYFKPHILDN-LTLVD 412

Query: 344  RYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
               +L P++D  V++L       QV    G     + R++R+G+ + E  S +L GI   
Sbjct: 413  EMESLSPVLDAKVMNLLPNSDTPQVFAACGRGGRSTFRMLRHGLEVEEVVSSDLPGIPNA 472

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ +   DDP+D+++++SF++ T +L +   + +EE +  GF S   TL      Y+ L
Sbjct: 473  VWTTKLKEDDPYDSYIILSFVNGTLVLCIG--ETIEEVQDTGFLSSAPTLAVQQIGYDAL 530

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R V S  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L
Sbjct: 531  LQVHPHGIRHVLSDKRV--NEWRVPQGKTIVAATTNKRQVVVALSSAELVYFELDLDGQL 588

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
             E +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L   
Sbjct: 589  NEYQDRKAMGSTVLALSIAEVPEGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQAL 647

Query: 580  IIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
              P S +  A          +  S++   L +G LL  +L+   G+LTD +   LGT+PI
Sbjct: 648  TAPPSAICIADMLDAGINKTQPTSFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPI 707

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     +    + A S R  + Y+    + ++ +  + + +   F++   P+ L     
Sbjct: 708  KLIRVLVQRNPGILALSSRSWLNYTYQNLMHFTPLIFENLDYAWSFSAELCPEGLIGISG 767

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRR-ICH----------------QEQSRTFAICSL 732
              L I  I  +  KL   +IPL   PR+ I H                 +++   A+  L
Sbjct: 768  SVLRIFQIPKLGTKLKQDAIPLSYTPRKFISHPTNGLFYLIEGDHRVRSDEASAKALGEL 827

Query: 733  KNQSCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
            + Q    + E+                     +R+++    + ++  PLD  E   S+  
Sbjct: 828  RQQGKMVDDELVNLPPETFGRQKAPAGTWASCIRIINPVDAKTVNIIPLDNNEAAFSLAV 887

Query: 774  CSFSDDSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 829
             SFS  S  ++  VGTA   ++ P        R   F  +   L+L+ + ET     ++ 
Sbjct: 888  VSFSARSGELHLVVGTAQDTFLAPRSCTSGFLRTYRFTDDGTNLELLHKTETNDVPLAVL 947

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKS 888
             F G+L+A + + ++LY     D G ++L  +  +     A+  + T+G  I+VGD+ +S
Sbjct: 948  GFQGRLVAGVGKALRLY-----DMGKKKLLRKVENKTFASAIVSLATQGSRILVGDMQES 1002

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATD 945
            +S  +YK  E  +   A D    W SA+ ++D +    A+   N++  R   K SE   D
Sbjct: 1003 VSFAVYKPPENKLLVFADDTQPRWTSAMTMVDYNTVASADRFGNIYVNRLDPKVSEQVDD 1062

Query: 946  EERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
            +  G               + E++  +H+G+ V      SLV        G    +++  
Sbjct: 1063 DPTGAGILHEKGLLAGAPHKTELLSHFHVGDIVTSINKVSLV-------AGGREVLLYTG 1115

Query: 991  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            ++G IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DG
Sbjct: 1116 LHGTIGILVPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLTWRGY-----YVPVKAVVDG 1170

Query: 1050 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DL E+F  L  ++   I+  ++ +V E+ K++E+L
Sbjct: 1171 DLCETFARLPASKQSAIAGELDRTVGEVLKKLEQL 1205


>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
            gc5]
          Length = 1212

 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 298/1228 (24%), Positives = 518/1228 (42%), Gaps = 172/1228 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PTNVT + +G F+  +E N++ A  +R+   LL P   Q     +L   
Sbjct: 6    NMFLYSLTLQPPTNVTLAVLGQFSGTKEQNIVTASGSRLT--LLRPDPSQGKVITLLSHD 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
            I+G I ++  FR  G  +D+L +AT+  +  ++++    +      +        R    
Sbjct: 64   IFGIIRSMAAFRLAGSNKDYLILATDSGRITIVEYIPAQNRFQRLHLETFGKSGVRRVIP 123

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
            G+    DP  R  LI     + L  V+  + + +L  +  +   +  VL +  +    G 
Sbjct: 124  GEYLACDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSMVALDVGY 183

Query: 173  AKPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLI 220
            A P    L  +  +A    T E A + +            + V   WS+  +D  A LL 
Sbjct: 184  ANPVFAALEIEYTEADQDPTGEAAREAETQLVYYELDLGLNHVVRKWSEP-VDPTASLLF 242

Query: 221  PVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVD--ADGSRYLL 270
             VP     P   GVL+ GEE I Y  +N  AF+  IP R   T+   R      G  + L
Sbjct: 243  QVPGGQDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRHIVSGVMHKL 300

Query: 271  GDHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNA 312
               AG    L+ T + +                  +V  LKI+      ++S++  L + 
Sbjct: 301  KGSAGAFFFLLQTEDGDLFKAVIDMVEDADGNPTGEVKRLKIKYFDTVPVSSSLCILKSG 360

Query: 313  VVYIGSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERY 345
             +Y  S +G+ Q  +                +   D K  Y            + ++E  
Sbjct: 361  FLYAASQFGNHQFYQFEKLGDDDEEKEFSSDDFPADPKAGYDAVYFYPRPLENLALVESI 420

Query: 346  VNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWS 404
             ++ P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI   +W+
Sbjct: 421  DSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWT 480

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
            L+ S  D +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV
Sbjct: 481  LKLSRGDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGEDGLIQV 538

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV 523
                +R +        NEW +P   S+  AT N  QV +A   G +VY E+ GDG L E 
Sbjct: 539  HPKGIRHIRHGQI---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDGSLAEY 595

Query: 524  KHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 581
               +  +  ++CL +  + E    S   AVG   D +VR+ SL PD  L +K        
Sbjct: 596  DEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPDSTLESKSVQALTAP 654

Query: 582  PRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
            P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+ L   
Sbjct: 655  PSSLAIIAMDDSSSGGSALYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVRLFQV 714

Query: 636  SSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
            + +  T V   S RP + YS    +  + + +N  ++  +  F+S    + +   +   L
Sbjct: 715  TVQGRTCVIGLSSRPWLGYSDPITRGFVVTPLNYVDLEWVWNFSSEQCEEGVVGIQGQSL 774

Query: 694  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV------ 746
             I  I+++   +  +SIPL   PRR+        F      N +   +     +      
Sbjct: 775  RIFAIENLGDTITQKSIPLTYTPRRLLKHPDHPMFYTVESDNNTLPPDLRAKLIAEPGVV 834

Query: 747  ----RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSCSF-SD 778
                 +L    F +                       + T  LD  E   S    SF S 
Sbjct: 835  NGDATVLPPDEFGYPKGKGRWASCISVIDPLSEEQRVLQTVDLDDNEAAVSAAIVSFASQ 894

Query: 779  DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKL 835
            D+  +  VGT   ++    + T+G I V+   EDG +L+ I + + +    +L AF G+L
Sbjct: 895  DNENFLIVGTGKDMIVNPRQFTEGYIHVYRFGEDGHELEFIHKTKVEEPPTALLAFQGRL 954

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            LA + + +++Y   LR    R+ Q++       L + + T+G  IVVGD+   ++ ++YK
Sbjct: 955  LAGVGKTLRIYDLGLR-QMLRKSQADVAPQ---LIVSLSTQGSRIVVGDVQHGVTYVVYK 1010

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG--- 949
                 +     D  A W++   ++D +   G +   N+F VR   K S+ A +E+ G   
Sbjct: 1011 PTTNKLIPFVDDTIARWVTCTTMVDYESVAGGDKFGNMFLVRCPEKASQEADEEQAGLHL 1070

Query: 950  ------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 997
                        RL ++   +  +        SLV       VG    +++  +NG IGV
Sbjct: 1071 LNTRDYLHGAPHRLNLLSHSYTQDVPTSITKTSLV-------VGGQDVLLWSGINGTIGV 1123

Query: 998  -IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 1056
             I  +  E   F + L+ ++R     + G +H  +R +      V  K  +DGDL E + 
Sbjct: 1124 FIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRGY-----YVPVKGVIDGDLCERYT 1178

Query: 1057 DLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             L   +   I+  ++ SV E+ +++ ++
Sbjct: 1179 LLPNDKKLMIAGELDRSVREIERKISDI 1206


>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
          Length = 1212

 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 286/1240 (23%), Positives = 527/1240 (42%), Gaps = 191/1240 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIY 59
            ++ Y +T  + T +  +  GNF+  +   + +A+   ++  LL P     +Q +L V I+
Sbjct: 1    MYLYNLTLQQATGIVCAINGNFSGGKSQEIAVARGKVLD--LLRPDENGKIQTILSVEIF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    G
Sbjct: 59   GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKN-VFDKVHQETFGKSGCRRIVPG 117

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 118  QYLAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIFYSICGVDCGFD 177

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    +  D  +A             +H+  YE+ L   + V   WS+  +DNGA++L+
Sbjct: 178  NPIFASIELDYSEADQDSTGQAAAEAQKHLTFYELDLG-LNHVSRKWSEQ-VDNGANMLV 235

Query: 221  PVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR------- 267
             VP       GVL+  E  ++Y +    +    IP R  +    G +    +        
Sbjct: 236  TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRYDLPAERGVLIVSAAMHKQKSMF 295

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             +LL    G +  + + H+ ++VT L+I+      + +++  L +  ++  S +G+  L 
Sbjct: 296  FFLLQTEYGDIFKVTLDHDNDRVTELRIKYFDTIPVTASLCVLKSGFLFAASEFGNHALY 355

Query: 327  KLNL---QPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLER 361
            +      +PD + S   ++E                      +  +L PI+D  +++L  
Sbjct: 356  QFQAIGDEPDVESSSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKIINLFE 415

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVS 420
            +   Q+ T  G     SLRI+R G+ I+E A  +L G+   +W+++ + +D FD ++VVS
Sbjct: 416  EETPQIFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVS 475

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            F + T +L++   + +EE    GF   T +L       + L+QV    +R +    R   
Sbjct: 476  FANATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR--I 531

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINP 539
            NEW++P   ++    +N  QV++A  GG ++Y E+   G L EV+  ++  +++CLDI P
Sbjct: 532  NEWRTPGKRTIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKQEMSGDVACLDIAP 591

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS-- 594
            + E    S+  AVG + D  +RI SL PD  + +++ + +     P S+L    +     
Sbjct: 592  VPEGRQRSRFLAVGSY-DNCIRILSLDPDDCMQVLSLQSVSSP--PESLLFLEVQASVGG 648

Query: 595  ----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
                      +L   L +G L   +++M TG+L+D +   LG +   L +   +    + 
Sbjct: 649  EDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIIRGRRAML 708

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QK 703
              S RP + Y      L + ++ + +     F+S    + +       L + TI+ + + 
Sbjct: 709  CLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGET 768

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAICSL------------KNQSCAEESEM-------- 743
             +  +IPL   PR+   Q + +   I                 + C E++ M        
Sbjct: 769  FNETAIPLRYTPRKFVLQPKRKLLVIIESDQGAYAAEQRENAKKECFEDAGMGENGKVEQ 828

Query: 744  ------------------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
                                            +R+LD +T        L   E   SI  
Sbjct: 829  MENGGDDEDKEDPLSDEQYGYPKVESDRWVSCIRVLDPRTANTTCLLELQDNEAAFSICL 888

Query: 774  CSFSD-DSNVYYCVGTAYVLP--EENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSL 828
             +F D +      VGTA  L    +   + G I ++  VEDGK L+L+ + +      +L
Sbjct: 889  VNFHDKEYGTLLAVGTAKGLQFWPKRSISSGYIHIYRFVEDGKSLELLHKTQVDDVPLAL 948

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMK 887
              F GKLLA +   ++LY     D G R+L  +C +      +  + T  D I VGD+ +
Sbjct: 949  CQFQGKLLAGVGSVLRLY-----DLGKRKLLRKCENKLFPNTITSIHTYRDRIYVGDIQE 1003

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---------- 937
            S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR          
Sbjct: 1004 SFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLAQDVSDEIE 1063

Query: 938  --------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
                    K  +G  +    ++E + ++H+G+ V   +  SL+   P         VI+G
Sbjct: 1064 EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLI---PSGG----ECVIYG 1116

Query: 990  TVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            TV G +G ++A    +   F   L+ ++R+    + G +H  +RS          K+ +D
Sbjct: 1117 TVMGSLGALLAFTSRDDVDFFSHLEMHMRQENPPLCGRDHMAYRS-----AYFPVKDVID 1171

Query: 1049 GDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL E F    +D+ R   DE+ +T      E+ K++EE+
Sbjct: 1172 GDLCEQFPTLPMDMQRKIADELDRTPG----EILKKLEEV 1207


>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
          Length = 1212

 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 302/1226 (24%), Positives = 518/1226 (42%), Gaps = 168/1226 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT VT + +G F   +E  ++ A  +R+ +H   P QG +   L   ++
Sbjct: 6    SMFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIVTALTHDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I TL  FR  G  +D++ I ++  +  ++++    +      +        R    GQ
Sbjct: 66   GIIRTLAAFRLAGSNKDYIIIGSDSGRITIVEFVPAQNRFNRLHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L    +    G A 
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  D+    T             YE+ L     V   WS + +D  A +L  
Sbjct: 186  PVFAALEVDYGDSDQDPTGQAFEEIEKTLVYYELDLGLNHVVR-KWS-DPVDRTASILFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFK-AIPIRPSITKAYGRV------------DA 263
            VP       GVL+ GE+ I Y  +N  AF+ AIP R   T+   R              A
Sbjct: 244  VPGGTDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRKGATEDPQRKRSIVAGVMHKMRGA 303

Query: 264  DGSRYLL--GDHAGLLHLLV--ITHEKEKVTG----LKIELLGETSIASTISYLDNAVVY 315
             G+ + L   D   L  + +  I  +  + TG    LKI+      IA+++  L +  ++
Sbjct: 304  AGAFFFLLQSDDGDLFKITIEMIEDDNGQPTGEVRRLKIKYFDTVPIATSLCILKSGFLF 363

Query: 316  IGSSYGDSQLIKL---------------NLQPDAKGSYVEV------------LERYVNL 348
            + S +G+ Q  +                N   D    Y  V            +E   ++
Sbjct: 364  VASEFGNHQFYQFEKLGDDDDETEYISDNFPTDPAEPYTPVYFHPRPAENLNLVESIDSM 423

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  V +L  +   Q+ +  G     + R +++G+ +NE    EL G+   +W+ + 
Sbjct: 424  NPLMDCKVANLTEEDAPQIYSICGTGARSTFRTLKHGLEVNEIVESELPGVPSAVWTTKL 483

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  D +D +++++F + T +L++   + +EE    GF S   TL       + L+QV   
Sbjct: 484  TRGDEYDAYIILAFSNGTLVLSIG--ETVEEVTDTGFLSSATTLAVQQLGEDGLIQVHPK 541

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KH 525
             +R + +  R   NEW +P   S+  AT NA QV +A   G +VY E+  DG L E  + 
Sbjct: 542  GIRHIRADRR--VNEWAAPQHRSIVAATTNAQQVAVALSSGEIVYFEMDSDGSLAEYDEK 599

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
             ++   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P S
Sbjct: 600  REMSGTVTCLSLGEVPEGRVRSNFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSS 658

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + + A    S      YL   L  G  L  +L+  TGEL+D +   LG +P  L   S +
Sbjct: 659  LSIMAMTDSSSGGSTLYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGPKPAKLFRVSVQ 718

Query: 639  NTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              T V A S RP + YS    K  + + ++   +     F+S   P+ +   +   L I 
Sbjct: 719  GQTAVLALSSRPWLGYSDPVTKGFMLTPLDYAGLEWGWNFSSEQCPEGMVGIQGQNLRIF 778

Query: 697  TIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE 755
            +I+ + + L   SIPL   PRR     +   F +    N   ++ ++    +LL+D + +
Sbjct: 779  SIEKLTENLLQHSIPLSYTPRRFVKHPEHPYFYVIQSDNNILSKSTKQ---KLLEDPSLQ 835

Query: 756  FISTYPLDTFEYG-----------------------------------CSILSCSF-SDD 779
               +  L   E+G                                    S+ + SF S +
Sbjct: 836  NGDSAVLPAEEFGYPRGRGHWASCIQIVDPIREKKVLQQIDLEDNEAAVSMATVSFASQE 895

Query: 780  SNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLL 836
              V+  VGT   ++      + G I V+   EDGK ++ I + + +    +L  F G+LL
Sbjct: 896  DEVFLVVGTGKDMVASPRSSSGGFIHVYRFHEDGKEIEFIHKTKVEEPPLALLGFQGRLL 955

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
              I +++++Y   +R    R+ Q+E       L + +QT+G  I+V D+ +SI+ ++YK 
Sbjct: 956  VGIGRELRIYDLGMR-QLLRKAQTEIAAS---LIVGLQTQGSRIIVSDVQESITFVVYKF 1011

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEV 953
            +E  +   A D  A W +   ++D +   G +   NL+ +R   K SE A +E  G   V
Sbjct: 1012 QENKLIPFADDTIARWTTCTTMVDYETVAGGDKFGNLWLLRCPTKASEEADEEGSGAHLV 1071

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT-----------VNGVIGVIASL- 1001
                H  +++    H   V  +  +    IPT I  T            +G+ G IA + 
Sbjct: 1072 ----HERQYLQGAPH--RVALMAHNFANDIPTSIQKTNLVAGGRDCLLWSGLQGTIAIMI 1125

Query: 1002 ---PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
                 E   F + L+ +LR     + G +H  +RS+      V  K  +DGDL E +  L
Sbjct: 1126 PFVSREDVDFFQTLEQHLRTEDAPLAGRDHLIYRSY-----YVPVKGVIDGDLCERYTLL 1180

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
               +   I+   + SV E+ +++ ++
Sbjct: 1181 PTDKKMMIAGEFDRSVREIERKISDM 1206


>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
 gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
 gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
 gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
 gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
 gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
          Length = 1214

 Score =  253 bits (645), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 292/1244 (23%), Positives = 527/1244 (42%), Gaps = 199/1244 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIY 59
            ++ Y +T  + T +  +  GNF+  +   + +A+   ++  LL P     +Q +  V ++
Sbjct: 1    MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILD--LLRPDENGKIQTIHSVEVF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    G
Sbjct: 59   GAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKN-VFDKVHQETFGKSGCRRIVPG 117

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 118  QYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFD 177

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    +  D  +A             +H+  YE+ L   + V   WS N +DNGA++L+
Sbjct: 178  NPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLG-LNHVSRKWS-NPVDNGANMLV 235

Query: 221  PVPPPL---CGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR------- 267
             VP       GVL+  E  ++Y +    +    IP R  +    G +    +        
Sbjct: 236  TVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMF 295

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             +L+    G +  + + H  + V+ LK++      +AS+I  L    ++  S +G+  L 
Sbjct: 296  FFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLY 355

Query: 327  KLNL---QPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLER 361
            +      +PD + S   ++E                      +  +L P++D  V+++  
Sbjct: 356  QFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFE 415

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVS 420
            +   Q+ +  G     SLRI+R G+ I E A  +L G    +W+++ +  D FD ++VVS
Sbjct: 416  EETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVS 475

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            F + T +L++   +++EE    GF   T +L       + L+QV    +R +    R   
Sbjct: 476  FTNATLVLSIG--EQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGR--I 531

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINP 539
            NEW++P   S+     N  QV++A  GG L+Y E    G L EV+  ++  +++CLDI P
Sbjct: 532  NEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAP 591

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS-- 594
            + E    S+  AVG + D +VRI SL PD  L +++ + +     P S+L    +     
Sbjct: 592  VPEGRKRSRFLAVGSY-DNTVRILSLDPDDCLQILSVQSVSSA--PESLLFLEVQASIGG 648

Query: 595  ----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
                      +L   L +G L   +++M TG+L+D +   LG +P  L + S +  + + 
Sbjct: 649  DDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAML 708

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QK 703
              S RP + Y        + ++ + +    PF+S    + +       L I  ID + + 
Sbjct: 709  CLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGET 768

Query: 704  LHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESE-------------------- 742
             +   +PL   PR+ + H ++     I S +    AEE E                    
Sbjct: 769  FNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNA 828

Query: 743  -------------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
                                           +  +R+LD +T        L   E   S+
Sbjct: 829  DQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSV 888

Query: 772  LSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIAEKETKGA 824
             + +F D +      VGT   +  +  P K  +  FI     VEDGK L+L+ + + +G 
Sbjct: 889  CTVNFHDKEYGTLLAVGTVKGM--QFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGV 946

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-LALYVQTRGDFIVVG 883
              +L  F G+LLA I   ++LY     D G + L  +C +       + +QT  D I VG
Sbjct: 947  PLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIISIQTYRDRIYVG 1001

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE-- 941
            D+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N++ VR   +  
Sbjct: 1002 DIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLS 1061

Query: 942  ---------GATDEERGRL--------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                     G    E+G+L        E+V ++H+G+ V   +  S++        G   
Sbjct: 1062 EEIEEDPTGGKIKWEQGKLNGAPNKVDEIV-QFHVGDVVTCLQKASMI-------PGGSE 1113

Query: 985  TVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++GTV G IG + A    +   F   L+ ++R+    + G +H  +RS          
Sbjct: 1114 SIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRS-----AYFPV 1168

Query: 1044 KNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEE 1083
            K+ +DGDL E F    +DL R   DE+ +T      E+ K++E+
Sbjct: 1169 KDVIDGDLCEQFPTLPMDLQRKIADELDRT----PAEILKKLED 1208


>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
 gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
          Length = 1213

 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 279/1229 (22%), Positives = 511/1229 (41%), Gaps = 176/1229 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T   PT    + VGNF+  ++  +I++  TR+E+    PQ   +  ++    +G + 
Sbjct: 4    YNLTLQPPTANIQAIVGNFSGVRQQEIIVSHGTRLELLRPDPQTGKVSTVISTDAFGSVR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D+  + ++  +  +L +D +++  +            R    GQ    
Sbjct: 64   SLAAFRLTGGTKDYAILGSDSGRIVILDYDPKTTSFVKLHQETFGKSGARRIVPGQYLAT 123

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  +IG      L  ++  D    L  +  +   +   +    +    G   P   
Sbjct: 124  DPKGRAVMIGAMEKAKLVYILNRDAAANLTISSPLEAHKNSAIIHHIVGVDVGFENPLFA 183

Query: 179  VLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP-- 223
             L  D             N   + +  YE+ L     V   WS+   D  A+LL+ VP  
Sbjct: 184  ALEVDYSESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLLVQVPGG 241

Query: 224  ----------PPLCGVLIIGEETIVYCSANAFK---AIPIR------PS----ITKAYGR 260
                      P   GVL+  E+ I+Y   +A +    IP R      P     IT A   
Sbjct: 242  QLASSDRYDGP--SGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDPERGVIITAAVMH 299

Query: 261  VDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +LL +  G L  + I HE+E V  LKI+      +AS++  L +  +++ S +
Sbjct: 300  KMKGAFFFLLQNEDGDLFKVTIEHEEEDVKALKIKYFDTVPVASSLCILKSGFLFVASEF 359

Query: 321  GDSQLIKLNLQPD-------AKGSY------------------------VEVLERYVNLG 349
            G+  L +     D          SY                        + + +   +L 
Sbjct: 360  GNHHLYQFQKLGDDDDEPEVTSTSYPSFGMADPTAALPRAYFKPRPLDNLALADELESLD 419

Query: 350  PIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
            PI+D  V++L       Q+    G     +LR +R+G+ + E  S EL GI   +W+ + 
Sbjct: 420  PILDSKVLNLLPNSDAPQIFAACGRGARSTLRTLRHGLEVEESVSSELPGIPNAVWTTKK 479

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            + +DP+D+++++SF++ T +L++   + +EE +  GF S + T+       + L+QV   
Sbjct: 480  TEEDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSSPTIAVQQIGADALLQVHPH 537

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHA 526
             +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E +  
Sbjct: 538  GIRHVLADRRV--NEWRVPQGKTIVTATTNKRQVVVALSSAELVYFELDLDGQLNEYQDR 595

Query: 527  Q-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            + +   +  L I  + E    +   AVG   D +VRI SL P+  L T         P S
Sbjct: 596  KAMGSTVLALSIGEVPEGRQRTPYLAVGC-EDQTVRIISLDPETTLETLSLQALTAPPSS 654

Query: 585  VLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            + +      S        ++   L +G LL  +L+   G+LTD +   LGT+PI L    
Sbjct: 655  ICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVP 714

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
                  + A S R  + Y+    + ++ +    + +   F++   P+ L       L I 
Sbjct: 715  VHKNPAILALSSRSWINYTHQNMMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGNVLRIF 774

Query: 697  TIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE------------- 742
            TI  +  KL   ++PL   PR++    ++  F +    ++  +EE+              
Sbjct: 775  TIPKLGSKLKQDTLPLSYTPRKLITHPENNYFYLIESDHRVYSEEATKAKLDELQKKGKK 834

Query: 743  -----------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-D 778
                                      +R++D    + ++ +PLD  E   SI    FS  
Sbjct: 835  IDEEIISLPPSEFGRPKAPAGTWASNIRIIDPVENKTVAVFPLDNNEAAFSIAIVPFSAR 894

Query: 779  DSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
            +  ++  VGTA    V P   E    R   F      L+L+ + ET     +L AF G+L
Sbjct: 895  NGELHLVVGTAKDTTVSPRTCESGFLRTYKFTENGTGLELLHKTETDDVPMALLAFQGRL 954

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 894
             A + + +++Y     D G ++L  +  +     A+  + T+G  I+VGD+ +S+  ++Y
Sbjct: 955  AAGVGKALRIY-----DIGKKKLLRKVENKSFTTAIVTLTTQGSRILVGDMQESVQYVVY 1009

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG-- 949
            K  E  +   A D    W++A+ ++D +  +  +   N+F  R   K S+   ++  G  
Sbjct: 1010 KQPENRLLTFADDTQPRWVTAITMVDYNTIVAGDRFGNIFVNRLDSKVSDQVDEDPTGAG 1069

Query: 950  -------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
                         + +++  +H+G+ +      SLV        G    +++  ++G IG
Sbjct: 1070 ILHEKPILMGAPHKTKMIAHFHVGDIITSLHKVSLV-------AGGREVIVYTGLHGTIG 1122

Query: 997  VIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
            ++   +  E   F+  L+ ++R     + G +   +R +      V  K  +DGDL E++
Sbjct: 1123 ILMPFISKEDVDFISTLEQHMRTEQPSLVGRDQLAYRGY-----YVPVKAVVDGDLCETY 1177

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L  ++   I+  ++ +V E+ K++E++
Sbjct: 1178 AHLPASKQSSIANELDRTVGEVLKKLEQM 1206


>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1213

 Score =  252 bits (644), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 295/1238 (23%), Positives = 515/1238 (41%), Gaps = 194/1238 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T    T ++ + VGNF+  ++  +I+++ TR+E  LL P      +  ++   ++G 
Sbjct: 4    YNLTLQPSTTISQAIVGNFSGARQQEIIVSRGTRLE--LLRPDVQTGKVSTVVTSDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+  + ++  +  +L +D ++S  +            R    GQ  
Sbjct: 62   IRSLTAFRLTGGTKDYAIVGSDSGRIVILDYDPKTSSFVKVHQETYGKSGARRIVPGQYL 121

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYGC 172
              DP  R  +I       L  ++  D    L      EA   N  +  +  LD+ F    
Sbjct: 122  ATDPKGRSVMIAATEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGF---- 177

Query: 173  AKPTIVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
              PT   L  D             N   + +  YE+ L     V   WS+   D  A+LL
Sbjct: 178  ENPTFAALEVDYSESDQDPTGEAFNNAEKLLTYYELDLGLNHVVRK-WSEPT-DPRANLL 235

Query: 220  IPVP------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------I 254
            + VP            P   GVL+  E+ I+Y   +A +    IP R            I
Sbjct: 236  VQVPGGQLASSDRYDGP--SGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDKERGLII 293

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
            T A          +LL    G L+ + I HE++ V  LKI+      +AS++  L +  +
Sbjct: 294  TAAVMHKMKGAFFFLLQSEEGDLYKVTIEHEEQDVKALKIKYFDTVPVASSLCILKSGFL 353

Query: 315  YIGSSYGDSQLIK---------------------------LNLQP---DAKG-SYVEVLE 343
            ++ + +G+  L +                           ++L P     +G   + +++
Sbjct: 354  FVAAEFGNHHLYQFQKLGDDDNEPEFSSTMYPNFGMANPAISLPPAYFSPRGLDNLTLVD 413

Query: 344  RYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
               +L P+VD  V++L       Q+    G     SLR++R+G+ + E  S +L GI   
Sbjct: 414  ELESLDPVVDAKVLNLLPNSDSPQIFAACGRGGRSSLRMLRHGLEVEEVVSSDLPGIPNA 473

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ +   DDPFD+++++SF++ T +L++   + +EE +  GF S + TL       + L
Sbjct: 474  VWTTKLREDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSSPTLAVQQLGADAL 531

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R V    R   NEW+ P G ++  AT N  QV++A     LVY E+  +G L
Sbjct: 532  LQVHPHGIRHVLVDRRV--NEWRVPQGKTIVCATTNRRQVVVALSSAELVYFELDLEGQL 589

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
             E +  + +   +  L +  + E    +   AVG   D +VRI SL   + +    L   
Sbjct: 590  NEYQERKAMGSTVLALSVGEVPEGRQRTPFLAVGC-EDQTVRIVSLDPESTLETISLQAL 648

Query: 580  IIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
              P S +  A          +  +++   L +G LL  +L+   G+LTD +   LGT+PI
Sbjct: 649  TAPPSAICIADMLDAGINKVQPTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPI 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     +    + A S R  + Y+    + ++ +    + +   F++   P+ L     
Sbjct: 709  KLVRVQIQRNPGILALSSRSWLNYTHQNLMHFTPLIFDNLDYAWSFSAELCPEGLIGISG 768

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQ----------------EQSRTFAICSL 732
              L I  I  +  KL   SIPL   PR+ I H                 E+++   I  L
Sbjct: 769  SVLRIFQIPKLGTKLKQDSIPLSYTPRKMIVHPTNGFFYMIEGDHRVMGEEAKQKKIEEL 828

Query: 733  KNQSCAEESEM----------------------HFVRLLDDQTFEFISTYPLDTFEYGCS 770
            + Q    + EM                        V  +D QT  FI   PLD  E   S
Sbjct: 829  RQQGKQVDEEMLNLPPEVFGRPKAPAGTWASGIRIVSPVDAQTVNFI---PLDNNEAAFS 885

Query: 771  ILSCSFS-DDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVY 826
            I    F+     +   VGTA   ++ P        R   F+ +   ++L+ + ET     
Sbjct: 886  IAVVPFTARGGELTLVVGTAQDTFLAPRSCTSGFLRTYRFLDDGRDIELLHKTETNDVPL 945

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDL 885
            ++ AF G+L A I + +++Y     D G ++L  +        A+  + T+G  I+VGD+
Sbjct: 946  AIMAFQGRLAAGIGKALRIY-----DIGKKKLLRKVESKNFSNAIVTLNTQGSRIIVGDM 1000

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 942
             +SI   +YK  E  +   A D    W++AV ++D +     +   N+F  R   K S+ 
Sbjct: 1001 QESIFYAVYKPPENRLLIFADDAQPRWITAVTMIDYNTVAAGDRFGNVFVNRLDPKISDQ 1060

Query: 943  ATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 987
              D+  G               +  ++  +H+G+ V      SLV        G    ++
Sbjct: 1061 VDDDPTGAGILHEKGILMGAPHKTAMIAHFHVGDIVTSIHKVSLV-------AGGRELLL 1113

Query: 988  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 1046
            +  ++G +G++   +  E   F+  L+ ++R     + G +H  WR +      V  K  
Sbjct: 1114 YTGLHGTVGILVPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLAWRGY-----YVPVKAV 1168

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +DGDL E F  L  ++   I+  ++ +V E+ K++E+L
Sbjct: 1169 VDGDLCEMFARLPASKQSSIATELDRTVGEVLKKLEQL 1206


>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
 gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 285/1243 (22%), Positives = 522/1243 (41%), Gaps = 196/1243 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIY 59
            ++ Y +T  + T +  +  GNF+  +   +++A+   ++  LL P     LQ +L V I+
Sbjct: 1    MYLYSLTLQRATGIISAINGNFSGGKAQEIVVARGKVLD--LLRPDENGKLQTVLSVEIF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I +L  FR  G  +D++ + ++  +  +L+++ E + L             R    GQ
Sbjct: 59   GAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKERNVLDKIHQETFGKSGCRRIVPGQ 118

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  +IG      L  V+  D   +L  +  +   +   +         G   
Sbjct: 119  YLAVDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSVCGVDCGFDN 178

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPV 222
            P    +  D  +A    T + A + +            + V   WS+  +DNGA++L+ V
Sbjct: 179  PIFAAIELDYSEADQDSTGQSASEAQKNLTFYELDLGLNHVSRKWSEQ-VDNGANMLVTV 237

Query: 223  P---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR--------Y 268
            P       GVL+  E  ++Y +    +    IP R  +    G +    +         +
Sbjct: 238  PGGGDGPSGVLVCVENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFF 297

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            LL    G +  +++ HE +KV  LKI+      + S++  L +  ++  S +G+  L + 
Sbjct: 298  LLQTEYGDIFKVMLDHENDKVKELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHALYQF 357

Query: 329  NL---QPDAKGSYVEVLE----------------------RYVNLGPIVDFCVVDLERQG 363
                 + D + S   ++E                      +  +L PI+D  V +L  + 
Sbjct: 358  QAIGEEEDVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVANLFDEE 417

Query: 364  QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFI 422
              Q+ +  G     SLRI+R G+ I+E A  +L G+   +W+++ +  D FD ++VVSF 
Sbjct: 418  TPQIFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNIYDEFDAYIVVSFN 477

Query: 423  SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
            + T +L++   + +EE    GF   T +L       + L+Q+    +R +    R   NE
Sbjct: 478  NATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHIREDGR--INE 533

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIG 541
            W++P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P+ 
Sbjct: 534  WRTPAKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVP 593

Query: 542  ENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS---- 594
            E    S+  AVG + D ++R+ SL PD  + +++ + +     P S+L    +       
Sbjct: 594  EGRQRSRFLAVGSY-DNTIRVLSLDPDDCMQILSVQSVSAP--PESLLFLEVQASIGGED 650

Query: 595  --------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
                    +L   L  G L   +++M TG+L+D +   LG +   L + + +    +   
Sbjct: 651  GADHPASLFLNAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSINVRGRRAMLCL 710

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLH 705
            S RP + Y      L + ++ + + +   F+S    + +       L I TI+ + +  +
Sbjct: 711  SSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVSVAGDALRIFTIERLGETFN 770

Query: 706  IRSIPLGEHPRRICHQEQSRTFAIC------------SLKNQSCAEESEM---------- 743
              +IPL   PR+   Q + +   I                 + C E S M          
Sbjct: 771  ETAIPLRYTPRKFVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEASGMGENGSASAEQ 830

Query: 744  -----------------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSC 774
                                           +R+LD ++        L   E   S+ + 
Sbjct: 831  MENGDDDDKDDPLSDEQYGYPKAESDKWVSCIRVLDPRSAATTCLLELQDNEAAFSLCTV 890

Query: 775  SFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIAEKETKGAVYS 827
            +F D +      VGTA  L  +  P +  +  FI     V+DGK L+L+ + + +G   +
Sbjct: 891  NFHDKEHGTLLAVGTAKGL--QFWPKRSLVTGFIHIYKFVDDGKSLELLHKTQVEGVPLA 948

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGD 884
            L  F G+LLA I   ++LY     D G + L  +C +      I++++  T  D I VGD
Sbjct: 949  LCQFQGRLLAGIGSVLRLY-----DLGKKRLLRKCENKLFPNTIVSIH--TYRDRIYVGD 1001

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------- 937
            + +S     Y+ +E  +   A D    W+++   +D D   GA+   N++  R       
Sbjct: 1002 IQESFHFCKYRRDENQLYIFADDSVPRWLTSSYHVDFDSMAGADKFGNIYFARLPQDVSD 1061

Query: 938  -----------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
                       K  +G  +    ++E + ++H+G+ VN  +  SL+        G    +
Sbjct: 1062 EIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVNSLQKASLI-------PGGGECI 1114

Query: 987  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            I+GTV G +G +      +   F   L+ +LR+    + G +H  +RS          K+
Sbjct: 1115 IYGTVMGSVGALLPFTSRDDVDFFSHLEMHLRQDHPPLCGRDHMSYRS-----AYFPVKD 1169

Query: 1046 FLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +DGDL E F    LD  R   DE+ +T      E+ K++EE+
Sbjct: 1170 VIDGDLCEQFPTLPLDAQRKIADELDRTPG----EILKKLEEV 1208


>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
          Length = 1197

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 297/1225 (24%), Positives = 504/1225 (41%), Gaps = 186/1225 (15%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIYGRIAT 64
            +T   PT V  +  GNF++PQ    + A+   ++  LL P     L+ ++   ++G +  
Sbjct: 6    LTLQPPTGVHAAVYGNFSAPQAQEFVAARGDVLQ--LLRPDEAGRLEVVISTQVFGVVRA 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            L+ FR  G  +D+L + ++  K  VL+ +  S +   R          R    GQ    D
Sbjct: 64   LQPFRLTGGERDYLVVGSDSGKIVVLEVNPSSGQFEARQSETYGKTGCRRITPGQYLAAD 123

Query: 125  PDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAFNIRLEELQV--LDIKF---LYGC 172
            P  R  L+G      L  V+  D   +L      EA       L V  LD+ F   ++ C
Sbjct: 124  PKGRALLVGAVEKQQLVYVMNRDASSRLTISSPLEAHRSNAIHLGVVGLDVGFENPIFAC 183

Query: 173  ---------AKPTIVVLYQDNKDA-RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
                     A PT     Q  +DA + +  YE+ L   + V   WS+  +   A++L+ V
Sbjct: 184  LELDYAEADADPT----GQAARDAVKSLVYYELDL-GLNHVTRRWSEQVV-RSANMLVAV 237

Query: 223  PPPLCG---VLIIGEETIVY---------CSANAFKAIPIRPSITKAYGRVDADGSRYLL 270
            P    G   VL++GE T+ Y         C+    +  P    I  A      D    LL
Sbjct: 238  PGGGDGPGGVLVLGENTVQYKNEGHPELTCAIPRRQGEPRDIVIVSAATHKQRDLFFVLL 297

Query: 271  GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK--- 327
                G L+ + + +    V  +KI+      +AS++      +++  S + +  L +   
Sbjct: 298  QSELGDLYKISLDYSGNAVEEIKIQFFDTVPVASSMCITKTGLLFCASEFSNHYLFQFLS 357

Query: 328  -------------------LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVV 368
                               L+  P  K + +++     +L P+    V DL  +   Q+ 
Sbjct: 358  IGEGDDTAKCSSLAMDPTELSTFPLRKLTNLQLASSMPSLSPVTQLLVDDLANEQTPQMY 417

Query: 369  TCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRI 427
               G     SLR++R+G+ I E A+  L G+ K +W L+ S  DP+D ++VVSF  E   
Sbjct: 418  ALCGNSNRSSLRVLRHGLPITEMAASALPGVAKAVWCLKESYADPYDKYIVVSF--EDAT 475

Query: 428  LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 487
            L + + + +EE    GF     +L       +  +Q+ +  +R V     +   EWK+P 
Sbjct: 476  LVLEVGETVEEVTQSGFLRDHGSLLVALLEDDSKLQIHANGIRHVPKF--QPVTEWKAPG 533

Query: 488  GYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINPIGENPSY 546
               +    AN+ QV+++  GG ++Y E+G  G L E     L +E+  LD+  + E    
Sbjct: 534  KKVIEHCAANSRQVVISLAGGEIIYFELGQSGELAEKGKLDLGFEVCSLDLGEVPEGRQR 593

Query: 547  SQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS----------- 594
             Q  AVG W D +VRI SL P+     K  L     P ++ L   +              
Sbjct: 594  FQFMAVGSW-DNTVRILSLDPNDLFRQKSTLALTSHPHTLCLAQLQSEPSTPDSEHSSQS 652

Query: 595  -YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             +L   L +G L   L++  T  LTD +   LGT P+ L   + +    + A S R  + 
Sbjct: 653  LFLSIGLDNGVLQQSLIDPITANLTDSRSRFLGTNPVKLFRVAVEGKRSILALSSRSWIS 712

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSL-AIAKEGELTIGTIDDI------QKLHI 706
            Y    +   + ++ + +S+   FNS   P  + A+  EG + I T+D +      QK ++
Sbjct: 713  YFHQTRRHLTPLSCELLSYASSFNSEQCPGGIVALTNEG-MKILTVDQLGDTFNQQKCNL 771

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQ-----------------SCAEESEMH----- 744
            R  P     + + H    R   I S  N+                 S AE+ + +     
Sbjct: 772  RYTPR----KAVVHAASRRLVVIESDHNEYGAAYKRQHGLRIPDIRSAAEQDDEYEDEIN 827

Query: 745  -------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYY 784
                                VR++D  + + +    LD  E   SI SC F D     + 
Sbjct: 828  EALLFPRGPLPAEKDKWASCVRIVDPVSCQTVVCEELDVDERARSIASCVFHDRGGEAFI 887

Query: 785  CVGTA--YVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VGT     L  +  P  G + V+ +VE  +L L+   E     +++  F G+LL ++ +
Sbjct: 888  IVGTVKKMQLHPQKAPAGGYLRVYRVVEGMQLVLVHTTEIDDIPHAMCEFQGRLLVSVGR 947

Query: 842  KIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
             +++Y    K MLR    R   S        + + ++  GD I   D+ +S   + YK +
Sbjct: 948  ALRIYDLGKKKMLRKCENRNFPS--------ILVELKAAGDRIYASDMHESFHFVKYKKD 999

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE---------------- 941
            E  +   A D    ++++  +LD D   GA+   N+F  R  SE                
Sbjct: 1000 ENQLVIFADDCVPRFITSSVLLDYDTLCGADKFGNVFVSRLPSEVSDEIDNPTANRILWD 1059

Query: 942  -GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
             G  +    +LE V ++H+G+ V      SLV        G I  +I+ T+ G IG +  
Sbjct: 1060 SGLLNGAPNKLEQVAQFHVGDVVTSMVRTSLV-------PGGIEAIIYATIMGRIGALIP 1112

Query: 1001 LPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
                Q + F   L+  +R+    + G +H  +RS+      +  KN  DGDL E F  LS
Sbjct: 1113 FTSRQDVDFYTHLEMYMRQEQPPLCGRDHLSYRSY-----YIPVKNVTDGDLCEQFSSLS 1167

Query: 1060 RTRMDEISKTMNVSVEELCKRVEEL 1084
              +   +++ ++ +  E+ K++E++
Sbjct: 1168 VEKQASVAEDLDRTPAEVLKKLEDI 1192


>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1216

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 287/1230 (23%), Positives = 513/1230 (41%), Gaps = 175/1230 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T   P+ VT + VGNF+  ++  +I++  TR+E  LL P      L  ++   ++G 
Sbjct: 4    YNLTLQPPSAVTQAIVGNFSGVRQQEIIVSHGTRLE--LLRPDVQTGKLSTVIATDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+  + ++  +  +L +D  +S  +            R    GQ  
Sbjct: 62   IRSLAAFRLTGGTKDYAIVGSDSGRIVILDYDPRTSSFVKLHQETFGKSGSRRIVPGQYL 121

Query: 122  IIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKF---L 169
              DP  R + +   +   L  ++  D    L  +  +        +  +  LD+ F   L
Sbjct: 122  ATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGLDVGFENPL 181

Query: 170  YGCAKPTIVVLYQD------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
            +   +       QD      N   + +  YE+ L     V   WS+   D  A+LL+ VP
Sbjct: 182  FAALEVDYTESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLLVQVP 239

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFK-AIPI-----------RPSITKAYG 259
                        P   GVL+  E+ I+Y      +  IPI           R  I  A  
Sbjct: 240  GGQLASSERFDGP--SGVLVCCEDHIIYRHMGVPQHRIPIPRRRHPLEDPERGIIIVAAV 297

Query: 260  RVDADGSRY-LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGS 318
                 G+ + LL    G L+ + I HE ++V  LKI+      +AS++  L +  +++ S
Sbjct: 298  MHKMKGAFFFLLQSEDGDLYKVTIEHEDDEVKALKIKYFDTVPVASSLCILKSGFLFVAS 357

Query: 319  SYGDSQLIKLNLQPD-------AKGSY------------------------VEVLERYVN 347
             +G+  L +     D       +  SY                        + + +   +
Sbjct: 358  EFGNHYLYQFQKLGDDDNEPEFSSTSYPSFGMAEPSMPLPHAHFHPRALDNLALADEMES 417

Query: 348  LGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            L PI+D  V++ L      Q+    G     SLR++R+G+ + E  S EL GI   +W+ 
Sbjct: 418  LDPILDSKVMNILPNSDTPQIFAACGRGARSSLRMLRHGLDVEESVSSELPGIPNAVWTT 477

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            +   DDPFD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV 
Sbjct: 478  KRKEDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQVH 535

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 524
               +R V +  R   NEW+ P G ++  A  N  QV++A     LVY E+  DG L E +
Sbjct: 536  PQGIRHVLADRRV--NEWRVPQGKTIVSAATNKRQVVVALSSAELVYFELDLDGQLNEYQ 593

Query: 525  HAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR 583
              + +   +  L +  + E    +   AVG   D +VRI SL   + +    L     P 
Sbjct: 594  DRKAMGSTVLALSVGEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAPP 652

Query: 584  SVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
            S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L  
Sbjct: 653  SAICIADMLDASINKTQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVR 712

Query: 635  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
                    + A S R  + Y+    + ++ +  + + +   F++   P+ L       L 
Sbjct: 713  VQIHGNPAILALSSRSWLNYTHQNLMHFTPLIFENLDYAWSFSAELSPEGLIGIAGSVLR 772

Query: 695  IGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES------EMH--- 744
            I  I  +  KL   +IPL   PR+      +R F +    ++   E++      EM    
Sbjct: 773  IFQIPKLGTKLKQDTIPLSYTPRKFISHPTNRYFYLIEGDHRVLGEDAAAKRLDEMRQRG 832

Query: 745  ---------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
                                        +R++D    + +S   LD+ E   S+    FS
Sbjct: 833  KMVDDNMLDLPPEVFGRPKAPAGTWASAIRIIDPVEAKTLSMITLDSNECAFSLAIVPFS 892

Query: 778  DDSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNG 833
               N ++  VGTA   ++ P        R   F  +   L+L+ + ET     +L AF G
Sbjct: 893  ARGNELHLVVGTAADTFLAPRSCSSGFLRTYKFTEDGTGLELLHKTETDDVPLALMAFQG 952

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            +L+A + + +++Y  + +    R+++++         + + T+G  I+VGD+ +SIS + 
Sbjct: 953  RLVAGVGKALRIYD-IGKKKLLRKVENKARATFSTAIVTLNTQGSRIIVGDMQESISFVA 1011

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG- 949
            YK  E  +   A D    W++A  ++D       +   N+F  R   K SE   D+  G 
Sbjct: 1012 YKAPENRLLVFADDNQPRWITATTMVDYTTIAAGDRFGNIFVNRLDPKVSEQVDDDPTGA 1071

Query: 950  --------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 995
                          + +++  +H+G+ V      SLV        G    +++  ++G I
Sbjct: 1072 GILHEKGLLMGAPHKTKMLAHFHIGDLVTSINKVSLV-------AGGREVLLYTGLHGTI 1124

Query: 996  GVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            G++   +  E   F+  L+ ++R     + G +   WR +    K+V     +DGDL E+
Sbjct: 1125 GILVPFVSKEDVDFISTLEQHMRTEQGSLVGRDQLSWRGYYTPVKSV-----VDGDLCET 1179

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +  L  T+   I+  ++ +V E+ K++E+L
Sbjct: 1180 YARLPGTKQSAIAGELDRTVGEVLKKLEQL 1209


>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1196

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 292/1220 (23%), Positives = 506/1220 (41%), Gaps = 174/1220 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
            Y +T  K + +  +  GNF++ +   +++ +   +E+      G +Q +  V  +G   +
Sbjct: 5    YNLTLQKSSGINAAVYGNFSASKAQEIVVLRNKVVELLRPDESGRVQSVTSVEAFGIARS 64

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            +   R  G  +D+L + ++  +  VLQ+D E +  +            R    GQ    D
Sbjct: 65   IATLRLAGANRDYLVLGSDSGRVVVLQFDKEKNAFVKVHQETYGKTGCRRIVPGQFLCAD 124

Query: 125  PDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCA------KPT 176
            P  R I L   +   L  V+  DN+  L    +  LE  +   I F + CA       P 
Sbjct: 125  PKGRAICLGAVEKNKLVYVMNRDNEANL--TISSPLEANKSHTIVF-HMCALDCGLDNPI 181

Query: 177  IVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               +  D  DA             +H+  YE+ L     V   WS+  +DNGA+ LIPVP
Sbjct: 182  FAAIELDYGDADADPSGEAVAEAQKHLTYYELDLGLNHVVR-KWSEP-IDNGANHLIPVP 239

Query: 224  -----PPLCGVLIIGEETIVYCSAN---AFKAIPIRPSITKAYGRVDADGSR-------- 267
                 P   GVL+  E  ++Y   N       IP R S+    G +    +         
Sbjct: 240  GGSDGP--GGVLVCCENFVIYRHQNHDEVRAVIPRRNSLAADRGVLIVSSASHRSKNSFF 297

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +L     G ++ L I +  E V+ +K++         ++  L    ++  S +G+  L +
Sbjct: 298  FLAQSEYGDIYKLTIDYSGETVSEVKVKYFDTIPPCVSLCVLKTGFLFAASEFGNHALYQ 357

Query: 328  LNLQPD------AKGSYVEVLERYV-------------------NLGPIVDFCVVDLERQ 362
                 D      +  S +E  E Y                    +L P++D    +L  +
Sbjct: 358  FAGIGDDDAVESSSASLMETEEGYEPVFFDPRPLTNLYTIDTIDSLCPVLDMQAHNLTEE 417

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
               Q+ T  G     SLRI+R GI +NE A   L G    +++++ S+ + +D++++VSF
Sbjct: 418  EMPQLYTLCGTGARSSLRILRQGIAMNELAMSPLPGQPNAIFTVKKSSSEEYDSYIIVSF 477

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            ++ T +L++   D + E    G    T TL         L+Q+  G +R + +  R   N
Sbjct: 478  LNATLVLSIG--DTVSEVNDSGILGTTTTLQACLMSDESLLQIHPGGLRHIKADKR--IN 533

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINPI 540
            EW++P    ++  T N+ QV++A  GG ++Y E+   G L EV+  +   +I+CLDI P+
Sbjct: 534  EWRTPGRKQISKCTCNSKQVVIALTGGEVIYFELDSAGQLIEVEKLETSGDIACLDIGPV 593

Query: 541  GENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS--- 594
             E    ++  A+G + D +VR+ SL PD  L  +  + L G   P S+L+    G     
Sbjct: 594  PEGALRNRFLAMGSY-DGTVRVMSLNPDDCLQTLAVQALKGSA-PSSLLVLQTAGTESTQ 651

Query: 595  ---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
                L   + +G L+   ++  +G+L+D +   LG +   L   S +    + A S RP 
Sbjct: 652  GGLLLNVGMANGVLIRATIDQVSGQLSDMRMRFLGARAPKLVRTSVRGAPALVALSSRPW 711

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIP 710
            + YS     + + ++   +  +C FNS   P+ +       L I +I+ + +  +  ++ 
Sbjct: 712  LGYSEKGTFVLAPISYVPLEEVCSFNSEQCPEGVVAISNQTLRIASIERLGENFNQTTVK 771

Query: 711  LGEHPRRICHQEQSRTFAI-----CSLK------------------NQSCAEESEM---- 743
            L   PR +     ++  A+     C++                   N    EE++M    
Sbjct: 772  LRYTPRAMSANPDTKMVALIESDQCTVPVGEREGPEATPADEAPETNDEDEEEAKMLPVE 831

Query: 744  -------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY 790
                           VR++D +  +      L   E   S+     +  + +   VGTA 
Sbjct: 832  QFGAPKSSPGTWAACVRIVDPKEAKSTFVLELHKSEAALSLCHVFLTGPNELLLAVGTAV 891

Query: 791  VLPEENEPTKGRI--LVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY- 846
             L        G    L     DG+ L L+    T G V +L  + G LLA +N  +++Y 
Sbjct: 892  NLTFAPRNCDGGFIHLYRYGNDGRTLNLVHSTPTDGPVGALCGYKGHLLAGVNNSLRIYD 951

Query: 847  ---KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
               K +LR    R   +       I  L+    GD I VGD+ +SI  + YK +EG+I  
Sbjct: 952  YGKKKLLRKVENRNFPN------FITTLHAA--GDRIYVGDVQESIHYVKYKADEGSIYI 1003

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVR----------------KN--SEGATD 945
             A D    +++A   LD D   GA+   N+F  R                KN  S+G  +
Sbjct: 1004 FADDTKPRYITATLPLDYDTLAGADKFGNIFVNRLPKDVSEDMDDDPTGGKNIYSQGVLN 1063

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 1005
                + E   + ++GE V     G+L         G I  +++GT  G IG +       
Sbjct: 1064 GAPNKSETSAQTYIGETVCALTKGAL-------QPGGIEIIMYGTFMGGIGCLLPFSSRS 1116

Query: 1006 YL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
             + F   L+ ++R+    + G +H  +RS+         KN +DGDL E F  L      
Sbjct: 1117 EIEFFTHLEMHMRQEAPSIVGRDHMAFRSY-----YAPVKNVIDGDLCEQFGALPADVQR 1171

Query: 1065 EISKTMNVSVEELCKRVEEL 1084
             I++ M+ +  E+ K++E++
Sbjct: 1172 RIAEEMDRTPGEILKKLEQV 1191


>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
          Length = 1230

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 308/1250 (24%), Positives = 532/1250 (42%), Gaps = 198/1250 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PTNVT + +G F   +E ++I A  +RI   L+ P   Q     +L   
Sbjct: 6    NMFLYSLTVQPPTNVTLAVLGQFAGTREQHIITASGSRIT--LVRPDAAQGKVVTVLSHD 63

Query: 58   IYGRIATLELFRPHGEAQ------------------DFLFIATERYKFCVLQWDAESSEL 99
            ++G I ++  FR  G  +                  ++L +AT+  +  ++++    +  
Sbjct: 64   VFGIIRSMAAFRIAGSNKGKSLVVPRPFLPLPFRGFNYLILATDSGRIAIIEYLPAQNRF 123

Query: 100  ITRAMGDVSDRIGRPTDNGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIR 157
                +        R    G+    DP  R  LI     + L  V+  +++ +L  +  + 
Sbjct: 124  QRLHLETFGKSGIRRVVPGEFLACDPKGRACLIASLEKNKLVYVLNRNSQAELTISSPLE 183

Query: 158  LEE--LQVLDIKFL-YGCAKPTIVVLYQDNKDARHVKTYEVALKDK------------DF 202
              +  + VL +  L  G A P    L  D  +A    T + AL  +            + 
Sbjct: 184  AHKPGVHVLSMVALDVGYANPVFAALETDYTEADQDPTGQAALDVETQLVYYELDLGLNH 243

Query: 203  VEGPWSQNNLDNGADLLIPVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSI 254
            V   WS+  +DN A LL  VP     P   GVL+ GEE I Y  +N  AF+  +P R   
Sbjct: 244  VVRKWSEP-VDNTASLLFQVPGGNDGP--SGVLVCGEENITYRHSNQEAFRVPVPRRRGA 300

Query: 255  TK--AYGRVDADGSRYLLGDHAGLLHLLVITHEKE------------------KVTGLKI 294
            T+  +  R    G  + L   AG    L+ T + +                  +V  LKI
Sbjct: 301  TEDPSRKRCIVAGVMHKLKGSAGAFFFLLQTEDGDLFKITIDMIEDRDGNPTGEVKRLKI 360

Query: 295  ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL---------------NLQPDAKGSY- 338
            +      +AS++  L +  +Y+ S +G+ Q  +                +   D K SY 
Sbjct: 361  KYFDTIPVASSLCILKSGFLYVASQFGNYQFYQFEKLGDDDEELEFSSDDFPTDPKQSYE 420

Query: 339  -----------VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIG 387
                       + ++E   ++ P++D  V +L  +   Q+ T  G     + RI+++G+ 
Sbjct: 421  AVFFHPRELENLALVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLE 480

Query: 388  INEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS 446
            +NE  + EL GI   +W+L+ S  D +D ++V+SF + T +L++   + +EE    GF +
Sbjct: 481  VNEIVASELPGIPSAVWTLKLSRGDQYDAYIVLSFTNATLVLSIG--ETVEEVNDSGFLT 538

Query: 447  QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATG 506
               TL         L+QV    +R + +      NEW +P   S+  AT N  QV +A  
Sbjct: 539  SVPTLAAQLLGGEGLIQVHPKGIRHIRNGQV---NEWAAPQHRSIVAATTNEHQVAVALS 595

Query: 507  GGHLVYLEI-GDGILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 564
             G +VY E+  DG L E    +  +  ++CL +  + E    S   AVG   D +VR+ S
Sbjct: 596  SGEIVYFEMDSDGSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLS 654

Query: 565  L-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGEL 617
            L P+  L +K        P S+ + A E  S      YL   L  G  L  +L+  TGEL
Sbjct: 655  LDPETTLESKSVQALTAPPTSLAVIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGEL 714

Query: 618  TDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCP 675
            TD ++  LG +P+ L   + +  T V   S RP + Y+    K  + + +N  ++     
Sbjct: 715  TDTRQKFLGPKPVKLFQVTVQGRTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWN 774

Query: 676  FNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICS-- 731
            F+S    + +   +   L I  I+ +   L  +SIPL   PRR+  H E    + I S  
Sbjct: 775  FSSEQCEEGVVGIQGQSLRIFAIEKLGDTLTQKSIPLTYTPRRMVKHPEHPMFYTIESDN 834

Query: 732  ------LKNQSCAEES------------EMHFVR----------LLD--DQTFEFISTYP 761
                  L+ Q  A+ S            E  + R          ++D   +  + + T  
Sbjct: 835  NTLPPELRAQLLADPSVVNGDARTLPPAEFGYPRAKGRWASCISVIDPLSEELQTLQTVD 894

Query: 762  LDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIA 817
            LD  E   S     F S D+  +  VGT   ++    + T+G I ++   EDG+ L+ I 
Sbjct: 895  LDNNEAAVSAAIVPFTSQDNESFLVVGTGKDMIVNPRQFTEGYIHIYRFSEDGRELEFIH 954

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYV 873
            + + +    +L AF G+L+A + + +++Y    K ML     R+ Q++       L + +
Sbjct: 955  KTKVEEPPTALLAFQGRLVAGVGKTLRIYDLGQKQML-----RKAQADVAPQ---LIVSL 1006

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
             T+G  IVVGD+ + ++ ++YK     +     D  A WM+   ++D +   G +   N+
Sbjct: 1007 STQGSRIVVGDVQQGVTYVVYKPLSNKLIPFVDDTVARWMTCTTMVDYESVAGGDKFGNI 1066

Query: 934  FTVR---KNSEGATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRL 975
            F VR   K S+ A +E  G               RL +V  ++  + +      SLV   
Sbjct: 1067 FIVRAPEKASQEADEEGAGLHLTNTRDYLHGTPHRLSLVSHFYSQDVLTSITKTSLV--- 1123

Query: 976  PDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
                VG    +++  ++G IGV I  +  E   F + L+ +LR     + G +H  +R +
Sbjct: 1124 ----VGGQDVLLWSGISGTIGVFIPFVTREDADFFQTLEQHLRTEDAPLAGRDHLMYRGY 1179

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                K V     +DGDL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1180 YAPVKGV-----IDGDLCERYTLLPNDKKQMIAGELDRSVREIERKISDI 1224


>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1213

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 284/1230 (23%), Positives = 505/1230 (41%), Gaps = 178/1230 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T   PT +T + VGNF+  ++  +I++  TR+E  LL P      +  ++   ++G 
Sbjct: 4    YNLTLQPPTAITQAIVGNFSGARQQEIIVSHGTRLE--LLRPDVQTGKISTVIATDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+  + ++  +  +L +D ++S  +            R    GQ  
Sbjct: 62   IRSLAAFRLTGGTKDYAIVGSDSGRIIILDYDPKTSSFVKLHQETYGKSGARRIVPGQYL 121

Query: 122  IIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKF---L 169
              DP  R + +   +   L  ++  D    L  +  +        +  +  LD+ F   +
Sbjct: 122  ATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNSAIIHHIVGLDVGFENPM 181

Query: 170  YGCAKPTIVVLYQDN-----KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP- 223
            +   +       QD      K+A  + TY       + V   WS+   D  A+LL+ VP 
Sbjct: 182  FAALEVDYAESDQDPTGDAFKNAEKMLTYYELDLGLNHVVRKWSEPT-DPRANLLVQVPG 240

Query: 224  -----------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------ITKAYG 259
                       P   GVL+  E  I+Y  A+  +    IP R            IT A  
Sbjct: 241  GQLASSERFDGP--SGVLVCCENHIIYRHADVPQHRVPIPRRRHPLEDLNRGLIITAAVM 298

Query: 260  RVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                    +LL    G L+ + I HE E+V  LKI+      +AS +  L +  +++ S 
Sbjct: 299  HKMKGAFFFLLQSEDGDLYKVTIEHEDEEVKSLKIKYFDTVPVASNLCILKSGFLFVASE 358

Query: 320  YGDSQLIKLNLQPD-------AKGSY---------VEVLERYVNLGPIVDFCVVD----- 358
            +G+  L +     D       +  SY         V +   +  L P+ +  V D     
Sbjct: 359  FGNHYLYQFQKLGDDDDEPEFSSTSYPSFGMADPSVPLPHAFFRLHPLDNLVVADELESL 418

Query: 359  -----------LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR 406
                       L      Q+    G     + R +R+G+ + E  S +L GI   +W+ +
Sbjct: 419  DPILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEESVSSDLPGIPNAVWTTK 478

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             + DDPFD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV  
Sbjct: 479  RTEDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQVHP 536

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKH 525
              +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E + 
Sbjct: 537  HGIRHVLADRRV--NEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEYQD 594

Query: 526  AQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS 584
             + +   +  L I  + E    +   AVG   D +VRI SL     +    L     P S
Sbjct: 595  RKAMGSTVLALSIGDVPEGRQRTPYLAVGC-EDQTVRIISLDPETTLETISLQALTAPPS 653

Query: 585  VLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
             +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L   
Sbjct: 654  AICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRV 713

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
              +    + A S R  + Y+    + ++ +    + +   F++   P+ L       L I
Sbjct: 714  QIQRNPGILALSSRSWLNYTHQNLMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGSVLRI 773

Query: 696  GTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES------------- 741
              +  +  KL   SIPL   PR+      +  F +    +++  EE+             
Sbjct: 774  FQVPKLGTKLKQDSIPLSYTPRKFITHPGNNYFYLIEGDHRTLGEEAASTKLDEFRRQGK 833

Query: 742  -----EMHF------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS- 777
                 E++                   +R++D    + ++  P+D+ E   S+    FS 
Sbjct: 834  SFDDGEINIPPEVFGRPKAPAGTWASCIRIIDPVEAKTVAVIPMDSNEAAFSLAIVPFSA 893

Query: 778  DDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 834
             +  ++  VGTA    V P        R   F  E   L+   + E      +L AF G+
Sbjct: 894  RNGELHLVVGTAADTIVSPRSCTSGYLRTYKFTNEGAGLEFQHKTEVDDVPLALLAFQGR 953

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLI 893
            L+A + + +++Y     D G ++L  +  +     A+  + T+G  I+VGD+ +SI   +
Sbjct: 954  LVAGVGKALRIY-----DIGKKKLLRKVENKTFSSAIVTLSTQGSRIIVGDMQESIQFAV 1008

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG- 949
            YK  E  +   A D    W++A  ++D +  +  +   N+F  R   K SE   D+  G 
Sbjct: 1009 YKPPENRLLVFADDSQPRWITASSMVDYNTIVAGDRFGNIFVNRLDPKVSEQVDDDPTGA 1068

Query: 950  --------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 995
                          + +++  +HLG+ V      SLV        G    +++  ++G I
Sbjct: 1069 GILHEKGILMGAPHKTKMLAHFHLGDLVTSIHKVSLV-------AGGREVLMYTGLHGTI 1121

Query: 996  GVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            G++   +  E   F+  L+ ++R     + G +   WR +    K V     +DGDL E+
Sbjct: 1122 GILVPFVSKEDVDFISTLEQHMRTEQSSLVGRDQLSWRGYYAPVKAV-----VDGDLCET 1176

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1177 YARLPAAKQSSIAGELDRTVGEVLKKLEQL 1206


>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
 gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
 gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1256

 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 286/1280 (22%), Positives = 541/1280 (42%), Gaps = 228/1280 (17%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGR 61
            ++ Y +T  +PT+V  S  GNF+  +++ +++     +E+      G +Q +L   ++G 
Sbjct: 1    MYLYNLTLQRPTSVYQSISGNFSGTKQVEIVLNHGRSLELIRYDENGKMQSVLYTEVFGI 60

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            + ++  FR     +D++ + ++  +  +L+++++ ++   +   +   R G R    GQ 
Sbjct: 61   VRSIIPFRLTSGTKDYIIVGSDSGRVVILEYNSQKNQF-DKIHQETFGRSGCRRIVPGQY 119

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCA 173
              +DP  R  +IG      L  ++  D+   L    +  LE  +   I F       G  
Sbjct: 120  LAVDPKGRAFMIGAIEKQKLVYILNRDSSANL--TISSPLEAHKSNTIVFSMCGVDVGFD 177

Query: 174  KP---TIVVLYQDN---------------------KDARHVKTYEVALKDKDFVEGPWSQ 209
             P   TI V Y +                      K  + +  YE+ L   + V   WS 
Sbjct: 178  NPIFATISVDYTEEDSSSGGGGGGSIEEMMDEDIGKKKKLLTYYELDLGLNNVVR-KWS- 235

Query: 210  NNLDNGADLLIPVPPPL---CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGS 266
            + +D+ A++++ VP       GVL+  E+ IVY + +  +   +R  I + YG     G 
Sbjct: 236  DQVDDSANIVMTVPGGTEGPGGVLVASEDYIVYRNQDHAE---VRSRIPRRYGSDPNKGV 292

Query: 267  R--------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNA 312
                           +L+    G L+ + + ++ ++V+ + +       +A+ ++ L N 
Sbjct: 293  LIISHSSHKQKGMFFFLVQSEHGDLYKITLDYQGDQVSEVNVNYFDTIVLANCLTVLKNG 352

Query: 313  VVYIGSSYGDSQLI----------------------KLNLQP-DAKGSYVEVLE------ 343
             ++  S +GD  L                        L   P ++ G+ +E L+      
Sbjct: 353  FLFAASEFGDHTLYFFKSIGDEEEEGQAKRLEDKDGHLWFTPRNSCGTKMEELKNLEPTS 412

Query: 344  RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGM 402
               +L PI+DF V+DL R+   Q+ +  G   + SL+++R+G+ +    +  L G+  G+
Sbjct: 413  HLSSLSPIIDFKVLDLVREENPQLYSLCGTGLNSSLKVLRHGLSVTTITTANLPGVPSGI 472

Query: 403  WSLRSSTD----DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 458
            W++  ST     D  D ++VVSF+  T +L++   D ++E    G    T TL       
Sbjct: 473  WTVPKSTSPNAIDQTDKYIVVSFVGTTSVLSVG--DTIQENHESGILETTTTLLVKSMGD 530

Query: 459  NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG 518
            + ++QV     R + S  R   NEW++P   ++  A+AN SQ+ +A  GG ++Y E+   
Sbjct: 531  DAIIQVFPTGFRHIKSDLR--INEWRAPGRKTIVRASANQSQLAIALSGGEIIYFELDQA 588

Query: 519  I-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL- 576
              L E+    L  +I+C++I+PI +  + ++  AV  W    +R+ SL   N + +  + 
Sbjct: 589  SNLIEIIKKDLRRDIACIEISPIPKGRNMARFIAVSDWEG-PIRVLSLDRDNCLGQVSML 647

Query: 577  -GGEIIPRSVLLCAFE----GIS-------------------------------YLLCAL 600
               ++   S+ +   +    GI                                +L   L
Sbjct: 648  DTDKVYIESLSIIEMQLNEMGIETKKSQSQTGQTTTTTTSTSSASSSVTSGGSLFLFVGL 707

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
             +G +    L+  TGEL+D +   LG +P+ L     + +  + A S R  + Y +  KL
Sbjct: 708  KNGVVKRATLDSVTGELSDIRTRLLGRKPVKLFKVKVRGSNAMLALSSRVWLNYINQGKL 767

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL-HIRSIPLGEHPRR-I 718
                ++++ + +    +S    +S+    E ++ I +ID +  L +  +I L   P+R I
Sbjct: 768  DIVPLSIEPLENASNLSSEQSAESIVATSENKIIIFSIDKLGDLFNQETIKLNATPKRFI 827

Query: 719  CHQEQSRTFAICSLKN--------QSCAEESEM--------------------------- 743
             H + S    + +  N            E+SE                            
Sbjct: 828  IHPQTSYIIILETETNYNTDNIDIDKINEQSEKLLLEKQKELQQEMDIDDDDQNNNNEIE 887

Query: 744  ----------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG 787
                             +++++D  T E + +  L+  E G S+ +CSF +   ++  VG
Sbjct: 888  PFKKLFKPKAGKGKWKSYIKIMDPITHESLESLMLEDGEAGFSVCTCSFGESGEIFLVVG 947

Query: 788  --TAYVL-PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
              T  VL P+ ++     +  FI    KL+L+ + E +  VY++  F GKL+  + + I+
Sbjct: 948  CVTDMVLNPKSHKSAHLNLYRFIDGGKKLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIR 1007

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
            +Y     D G ++L  +C        +  + + GD +VVGD+ +SI  + YK  E  +  
Sbjct: 1008 IY-----DMGKKKLLRKCETKNLPNTIVNIHSLGDRLVVGDIQESIHFIKYKRSENMLYV 1062

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATD 945
             A D    WM++  +LD D   GA+   N+F +R                  K   G  +
Sbjct: 1063 FADDLAPRWMTSSVMLDYDTVAGADKFGNIFVLRLPLLISDEVEEDPTGTKLKFESGTLN 1122

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHE 1004
                +L+ +  + +G+ V      SLV       VG    +++ T++G IG +I     E
Sbjct: 1123 GAPHKLDHIANFFVGDTVTTLNKTSLV-------VGGPEVILYTTISGAIGALIPFTSRE 1175

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
               F   L+ N+R     + G +H  +RS+         KN +DGDL E F  L+  +  
Sbjct: 1176 DVDFFSTLEMNMRSDCLPLCGRDHLAYRSY-----YFPVKNIIDGDLCEQFSTLNYQKQL 1230

Query: 1065 EISKTMNVSVEELCKRVEEL 1084
             IS+ ++ S  E+ K++EE+
Sbjct: 1231 SISEELSRSPSEVIKKLEEI 1250


>gi|392570042|gb|EIW63215.1| hypothetical protein TRAVEDRAFT_161375 [Trametes versicolor FP-101664
            SS1]
          Length = 1213

 Score =  248 bits (634), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 293/1235 (23%), Positives = 511/1235 (41%), Gaps = 188/1235 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T   PT +TH+  GNF+  +   +I+++ TR+E  LL P      +  ++   ++G 
Sbjct: 4    YNLTLQPPTAITHAVAGNFSGSRAQEIIVSRGTRLE--LLRPDAQSGKVLTVIATEVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D++ + ++  +  +L +D  +S  +            R    GQ  
Sbjct: 62   IRSLAAFRLTGGTKDYVIVGSDSGRIVILDYDPRTSTFVKIHQETYGKSGARRIVPGQYL 121

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYGC 172
              DP  R  +IG      L  ++  D    L      EA   N  +  +  LD+ F    
Sbjct: 122  ATDPKGRSVMIGSVEKAKLVYILNRDAAANLTISSPLEAHKNNAIIHHIVGLDVGF---- 177

Query: 173  AKPTIVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
              PT   L  D             N   + +  YE+ L     V   WS+   D  A+LL
Sbjct: 178  ENPTFAALEVDYSESDQDPTGEAFNNAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLL 235

Query: 220  IPVP------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------I 254
            + VP            P   GVL+  E+ I+Y   ++ +    IP R            I
Sbjct: 236  VQVPGGQLAASERYDGP--SGVLVCCEDHIIYRHMDSPQHRVPIPRRKHPLEDTERGLII 293

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
            T A          +LL    G L+ + I HE++ V  +KI+      +AS++  L +  +
Sbjct: 294  TAAVMHKMKGAFFFLLQSEEGDLYKVTIEHEEQDVKAVKIKYFDTVPVASSLCILKSGFL 353

Query: 315  YIGSSYGDS---QLIKLN---------------------LQPDAKGSY-------VEVLE 343
            ++ S +G+    Q  KL                        P  +G +       + +++
Sbjct: 354  FVASEFGNHYFYQFQKLGDDDNEPEWSSADYPSYGMADPSTPLPRGYFRPRALDNLTLVD 413

Query: 344  RYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
               +L PI+D  V++L       Q+ T  G     + R +R+G+ + E  S +L GI   
Sbjct: 414  ELESLCPIIDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEEVVSSDLPGIPNA 473

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ +   DD +D+++++SF++ T +L++   + +EE +  GF S   TL       + L
Sbjct: 474  VWTTKLKEDDLYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADAL 531

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R V +  R   NEWK P G ++  AT N  QV++A     LVY E+  DG L
Sbjct: 532  LQVYPHGIRHVLADRRV--NEWKVPSGKTIVCATTNKRQVVVALSSAELVYFELDLDGQL 589

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
             E +  + +   +  L +  + E    +   AVG   D +VRI SL   + +    L   
Sbjct: 590  NEYQDRKAMGSTVLALSVAEVPEGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQAL 648

Query: 580  IIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
              P S +  A          +  +++   L +G LL  +L+   G+LTD +   LGT+PI
Sbjct: 649  TAPPSAICIADMLDASINKSQPTTFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPI 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L   + +    + A S RP + Y+    + ++ +  + + +   F++    + L     
Sbjct: 709  RLLRVNIQQNPAILALSSRPWLNYTYQNFMHFTPLIFENLDYAWSFSAELCTEGLIGISG 768

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRRIC--------------HQEQSRTFAICSLKNQ 735
              L I  I  +  KL   S+PL   PR+                H+  S   A   L+  
Sbjct: 769  SLLRIFQIPKLGTKLKQDSLPLSYTPRKFMPHPTNGLLYLIEGDHRVMSEEAASKKLQEM 828

Query: 736  SCAEESEMHFVRLLDDQTF----------------------EFISTYPLDTFEYGCSILS 773
                E     V LL  + F                        +    LD  E   S+  
Sbjct: 829  RARGERIDEEVLLLPPEQFGRPKAPAGTWASCIRIINPLESSTVKVIHLDNNEAAFSMAI 888

Query: 774  CSFSDDSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 829
              F+   N ++  VGTA   ++ P        R   FI +   L+ + + ET     ++ 
Sbjct: 889  VPFAARGNELHLVVGTAQDTFLSPRSCTSGFLRTYRFIDDGRDLEFLHKTETSDVPLAVM 948

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKS 888
            AF GKL+A + + ++LY     D G ++L  +  + G   A+  + T+G  I+VGD+ +S
Sbjct: 949  AFQGKLIAGVGKSLRLY-----DVGKKKLLRKVENKGFPAAIVTLNTQGSRIIVGDMQES 1003

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE------- 941
            +   +YK  E  +   A D    W++A  +LD +  +  +   N+F  R +S+       
Sbjct: 1004 VFYAVYKAPENRLLVFADDAQPRWVTATTMLDYNTVVAGDRFGNVFVNRLDSKISDQIDD 1063

Query: 942  ----GATDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
                     E+G L        ++  +H+G+ V      +LV        G    +++  
Sbjct: 1064 DPTGAGILHEKGVLFGAPHKSVMLSHFHVGDIVTSLHKVALV-------AGGREVLLYTC 1116

Query: 991  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            ++G IG++   +  E    L  L+ ++R     + G +H  WR +      V  K+ +DG
Sbjct: 1117 LHGTIGILVPFVSKEDVDLLTTLEQHMRTEQLSLVGRDHLTWRGY-----YVPVKSVVDG 1171

Query: 1050 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DL ESF  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1172 DLCESFAKLPANKQSTIAGELDRTVGEVLKKLEQL 1206


>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
          Length = 1212

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 291/1216 (23%), Positives = 518/1216 (42%), Gaps = 156/1216 (12%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y +T + PT +T + +G F   +E  ++ A  +R+ +H   P QG +   L   ++G I 
Sbjct: 10   YSLTINPPTAITQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIITALSHDVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             +  FR  G  +D++ I ++  +  ++++    ++     +        R    GQ   +
Sbjct: 70   AIAAFRLAGSNKDYIIITSDSGRITIVEFVPAQNKFNRLHLETFGKSGVRRVVPGQYLAV 129

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  L      + L  V+  +++ +L  +  +   + Q L    +    G A P   
Sbjct: 130  DPKGRACLTASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYANPVFA 189

Query: 179  VLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVPPP 225
             L  D  ++    T             YE+ L     V   WS+  +D  A++L  VP  
Sbjct: 190  ALEIDYGESDQDPTGQAYDEIEKQLVYYELDLGLNHVVRK-WSEP-VDRTANILFQVPGG 247

Query: 226  L---CGVLIIGEETIVYCSAN--AFK-AIPIRPSITKAYGRVD--ADGSRYLLGDHAGLL 277
                 GVL+ GE+ I Y  +N  AF+ AIP R   T+   R      G  + L   AG  
Sbjct: 248  TDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRRGATEDPQRKRNIVAGVMHKLKGAAGAF 307

Query: 278  HLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
              L+ T + +                  +V  LKI+      +A+++  L +  +++ S 
Sbjct: 308  FFLLQTDDGDLFKITIEMVEDDNGQPTGEVRRLKIKYFDTVPVATSLCILKSGFLFVASE 367

Query: 320  YGDSQLIKLNLQPD---------------AKGSYVEV------------LERYVNLGPIV 352
            +G+ Q  +     D               A  SY  +            +E   ++ P++
Sbjct: 368  FGNHQFYQFEKLGDDDEETEFVSDDFPTGAHESYTPIYFHPRPAENLSLVESIDSMNPLM 427

Query: 353  DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDD 411
            D  V +L  +   Q+ +  G     + R +++G+ ++E    EL G+   +W+ + +  D
Sbjct: 428  DCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRGD 487

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             +D ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +R 
Sbjct: 488  TYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRH 545

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLE 529
            + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  ++ 
Sbjct: 546  IRADHR--VNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMS 603

Query: 530  YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLC 588
              ++CL +  + E    SQ  AVG   D +VRI SL PD  L  K        P ++ + 
Sbjct: 604  GTVTCLSLGEVPEGRQRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSPPNALSIM 662

Query: 589  AFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
            A    S      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   + +  T 
Sbjct: 663  AMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQGQTA 722

Query: 643  VFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+ 
Sbjct: 723  VLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSIEK 782

Query: 701  I-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF----- 754
            +   L   SIPL   PRR     +   F +    N   +  ++    +LL+D +      
Sbjct: 783  LTDNLLQESIPLTYTPRRFVRHPEHACFYVIEADNNILSPATKQ---KLLEDPSVTNGDA 839

Query: 755  ------EF------------------------ISTYPLDTFEYGCSILSCSF-SDDSNVY 783
                  EF                        +ST  L+  E   SI   +F S +   +
Sbjct: 840  TVLPPEEFGYPRGTNHWASCISVVDPVTEKKVLSTIHLEDNECAVSIAVVAFASQEDETF 899

Query: 784  YCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAIN 840
             CVGT   ++      + G I V+   EDGK L+ I + + +    +L AF G+LLA + 
Sbjct: 900  LCVGTGKDMVVSPRSFSAGFIHVYRFHEDGKELEFIHKTKVEEPPMALLAFQGRLLAGVG 959

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            + +++Y   +R    R+ QSE   +   + + +QT+G  I+V D+ +SI++++YK +E  
Sbjct: 960  KDLRIYDLGMR-QLLRKAQSEVAPN---MIVGLQTQGSRIIVSDVQESITMVVYKFQENR 1015

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------RL 951
            +     D  A W S   ++D +   G +   NL+ +R   K SE A +E  G      R 
Sbjct: 1016 LIPFVDDTIARWTSCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEEGSGAHLLHERQ 1075

Query: 952  EVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGV-IASLPHEQYLF 1008
             + G  H    +       + M +  +++  G    +++  + G +G+ I  +  E   F
Sbjct: 1076 YLAGAPHRLTLMAHNFSQDIPMSIQKTNLVAGGRDCLLWSGLQGTLGILIPFVSREDVDF 1135

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 1068
             + L+ +LR     + G +H  +RS+      V  K  +DGDL E +  L   +   I+ 
Sbjct: 1136 FQTLEQHLRSEDPPLAGRDHLIYRSY-----YVPVKGVIDGDLCERYTLLPTDKKQMIAG 1190

Query: 1069 TMNVSVEELCKRVEEL 1084
             ++ SV E+ +++ ++
Sbjct: 1191 ELDRSVREIERKISDI 1206


>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
 gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
          Length = 1166

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 289/1215 (23%), Positives = 498/1215 (40%), Gaps = 194/1215 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62
            Y +T  K   +T +  GNF++ +   +++ +   IE  LL P     +Q +  +  +G +
Sbjct: 5    YNLTLQKSGGITAAAYGNFSAAKAQEIVVVRNKVIE--LLRPDDSGRVQTVSSMEAFGVV 62

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
             ++   R  G  +D+L + ++  +  +LQ+  E +  +            R    GQ   
Sbjct: 63   RSICALRLAGANRDYLCVGSDSGRVVILQFKKERNAFVKVHQETFGKSGCRRVVPGQFVC 122

Query: 123  IDPDCRLIGLHLYD--GLFKVIPFDNKGQLK-----------------EAFNIRLEELQV 163
             DP  R I L   +   L  V+  DN+  L                   A +  L+    
Sbjct: 123  ADPKGRAICLGAMERSKLVYVMNRDNEANLTISSPLEANKSHAITYHMCALDCGLDNPVF 182

Query: 164  LDIKFLYGCAK--PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
              I+  YG     PT  V+ +  K   H+  YE+ L     V   WS+  +DNGA+ LIP
Sbjct: 183  AAIELDYGEVDDDPTGEVVAETQK---HLTYYELDLGLNHVVR-KWSEP-IDNGANHLIP 237

Query: 222  VP---PPLCGVLIIGEETIVYCSAN---AFKAIPIRPS--------ITKAYGRVDADGSR 267
            VP       GVL+  E  I+Y   +       IP R S        I  + G        
Sbjct: 238  VPGGSDGPGGVLVCCENFIIYRHQDHEEVRAVIPRRTSLPGDRGVLIVSSAGHKSKKSFF 297

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +L     G ++ L I +  +KV+ +K++         ++  L    ++  S +G+  L +
Sbjct: 298  FLAQSEYGDIYKLSIEYSGDKVSEVKVKYFDTIPPCVSMCVLKTGFLFAASEFGNHALYQ 357

Query: 328  LNLQPD------AKGSYVEVLERYV-------------------NLGPIVDFCVVDLERQ 362
                 D      +  S +E  + Y                    +L PI+D    +L  +
Sbjct: 358  FAGIGDDDAVESSSASLMETEQGYEPVFFDPRRLTNLYPIDKIDSLCPILDMQAHNLTEE 417

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
               Q+ T  G     SLRI+R GIG+NE A   L G    +++++  + D +D ++VVSF
Sbjct: 418  DTPQLYTLCGTGARSSLRILRQGIGMNELAMSSLPGQPNAIFTVKKKSSDQYDGYIVVSF 477

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            ++ T +LA+   D + E    G    T TL       + L+QV +G +R + +  R   N
Sbjct: 478  LNATLVLAIG--DTVTEVSDSGILGTTMTLQVCLMNDDSLLQVHAGGLRHIKADKR--IN 533

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINPI 540
            EW++P    ++  T N+ QV++A  GG ++Y E+   G L EV+  +   +I+C+DI P+
Sbjct: 534  EWRTPGRKQISKCTCNSKQVVIALTGGEVIYFELDSAGQLIEVEKLETNGDIACVDIAPV 593

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLC------AFE 591
             E    S+  A+G + D +VR+ SL     L  +  + L G   P S+L+       + +
Sbjct: 594  PEGALRSRFLAMGSY-DGTVRVMSLNSDDCLQTLAVQALKGST-PSSLLILQTAGTESLQ 651

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
            G   L   + +G L+   L+  +G+L+D +   LGT+   L   S +  + + A S RP 
Sbjct: 652  GSLLLNVGMANGVLMRATLDQVSGQLSDMRVRFLGTRAPKLVRTSVRGESALVALSSRPW 711

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIP 710
            + YS     + S ++   +  +C F+S A P+ +       L I +++ + +  H  +I 
Sbjct: 712  LGYSEKGTFVLSPISYVALEEVCSFSSEACPEGVVAISNQTLRIASVERLGENFHQTTIK 771

Query: 711  LGEHPRRICHQEQSRTFAI-----CSL---------------KNQSCAEESEMHF----- 745
            L   PR +     ++  A+     CS+                +++  +E E++      
Sbjct: 772  LRYTPRAMSANPDTKMVALIESDQCSVPVGERESPEATSADEASEANGDEDELNMLPVEQ 831

Query: 746  --------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 791
                          VR++D +  +      L   E   SI     +  + +   VGTA  
Sbjct: 832  YGAPKSSPGTWAACVRIIDPKDAKSQYVLELGKNESAISICHVYLTGPNELLLAVGTAQN 891

Query: 792  L---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
            L   P   +     +  +  +   L L+    T+G V +L                    
Sbjct: 892  LTFAPRNCDGGFIHLYRYGTDSKTLSLVHSTPTEGPVGAL-------------------- 931

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
                         CG+ GH+LA       D I VGD+ +SI  + YK +EG++   A D 
Sbjct: 932  -------------CGYRGHLLAXXXXXXXDRIYVGDVQESIHFVKYKADEGSMYIFADDT 978

Query: 909  NANWMSAVEILDDDIYLGAENNFNLFTVR----------------KN--SEGATDEERGR 950
               +M+A   LD D   GA+   N+F  R                KN  S+G  +    +
Sbjct: 979  KPAYMTAALPLDFDTLAGADKFGNIFVNRLPKDISEDMDEDPTGGKNIYSQGVLNGAPNK 1038

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FL 1009
             E      +GE V     G+L         G I  +++GT  G IG +        + F 
Sbjct: 1039 SETCARTFIGETVCALTKGAL-------QPGGIDIIMYGTFLGGIGALVPFQTRSEIDFF 1091

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
              L+ ++R+    + G +H  +RS+         KN +DGDL E F  L+      I++ 
Sbjct: 1092 ITLEMHMRQEASSIVGRDHMAFRSY-----YAPVKNVIDGDLCEQFGALAPEVQRRIAED 1146

Query: 1070 MNVSVEELCKRVEEL 1084
            M+ +  E+ KR+E++
Sbjct: 1147 MDRTPGEILKRLEQI 1161


>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1236

 Score =  246 bits (628), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 297/1221 (24%), Positives = 511/1221 (41%), Gaps = 164/1221 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT  T + +G FT  +E  +I A  +R+ +H   P QG +   L   ++
Sbjct: 6    SMFMYSLTVQPPTATTQAILGQFTGNKEQQIITASGSRLTLHRPDPSQGKILTALSHDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I  L  FR  G  +D++ I ++  +  ++++    ++     +        R    GQ
Sbjct: 66   GIIRALASFRLAGSNKDYIIITSDSGRITIVEFLPAQNKFNRLHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L         G A 
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMCALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  D+    T             YE+ L     V   WS + +D  A +L  
Sbjct: 186  PVFAALEVDYGDSDQDPTGQAYDEIEKSLVYYELDLGLNHVVR-KWS-DPVDRTASVLFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFK-AIPIRPSITK--AYGRVDADGSRYLLGDH 273
            VP       GVL+ G++ I Y  +N  AF+ AIP R   T+     RV   G  + L   
Sbjct: 244  VPGGTDGPSGVLVCGDDNITYRHSNQEAFRVAIPRRRGATEDPNRKRVIVGGVMHKLKGA 303

Query: 274  AGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVY 315
            AG    L+ T + +                  +V  LKI+      IA+++  L +  ++
Sbjct: 304  AGAFFFLLQTDDGDLFKVTIEMVENDEGAPTGEVKRLKIKYFDTVPIATSLCILKSGFLF 363

Query: 316  IGSSYGDSQLIKL---------------NLQPDAKGSYVEV------------LERYVNL 348
            + S +G+ Q  +                N   D    Y  V            +E   ++
Sbjct: 364  VASEFGNHQFYQFEKLGDDDEETEFISDNFPTDPLEPYTPVYFHPRPAENLSLVESIDSM 423

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  V +L  +   Q+ +  G     + R +R+G+ ++E    EL G+   +W+ + 
Sbjct: 424  NPLMDCKVANLTEEDAPQIYSICGTGARSTFRTLRHGLEVSEIVESELPGVPSAVWTTKL 483

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            + +D +D ++++SF + T +L++   + +EE    GF S   TL       + L+QV   
Sbjct: 484  TRNDTYDAYIILSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGDDGLIQVHPK 541

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KH 525
             +R + +  R   NEW +P   S+  A  NA QV +A   G +VY E+  DG L E  + 
Sbjct: 542  GIRHIRADRRV--NEWAAPQHRSIVAAATNARQVAVALSSGEIVYFEMDSDGSLAEYDEK 599

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
             ++   ++CL +  + E    SQ  AVG   D +VRI SL PD  L  K        P +
Sbjct: 600  KEMSGTVTCLSLGEVPEGRVRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSA 658

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + + A    S      YL   L  G  L  +L+  TGEL+D +   LG +P  L   S +
Sbjct: 659  LSIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPARLFRVSVQ 718

Query: 639  NTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
                V A S RP + YS    K  + + +N   +     F+S    + +   +   L I 
Sbjct: 719  GQAAVLALSSRPWLGYSDPVTKGFMLTPLNYPGLEWGWNFSSEQCTEGMVGIQGQNLRIF 778

Query: 697  TIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF- 754
            +I+ +   L   +I L   PRR     +   F      N   +  ++    +LL+D +  
Sbjct: 779  SIEKLTDNLLQDTISLTYTPRRFLRHPEHPLFYTIESDNNILSPATK---AKLLEDPSIV 835

Query: 755  ----------EFISTYP--------------------------LDTFEYGCSILSCSFSD 778
                      EF   YP                          LD  E   S+ + SFS 
Sbjct: 836  NGDAAVLPAEEF--GYPRGKNHWASCISVVDPVTEKRVLQKIDLDDNEAAVSMAAVSFSS 893

Query: 779  -DSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGK 834
             D  V+  +GT   ++      T G I V+   D   +++ I + + +    +L  F G+
Sbjct: 894  QDDEVFLVIGTGKDMIVSPRSSTAGFIHVYRFHDNGKEIEFIHKTKVEEPPMALLGFQGR 953

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
            LL  I + +++Y   +R    R+ Q+E   +   L + +QT+G  IVV D+ +SI +++Y
Sbjct: 954  LLVGIGKDLRIYDLGMR-QLLRKAQAEVAPN---LIVGLQTQGSRIVVSDVQESIIMIVY 1009

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE----- 946
            K +E  +     D  + W S   ++D +   G +   NL+ +R   K SE A +E     
Sbjct: 1010 KFQENKLIPFVDDTISRWTSCTTMVDYETVAGGDKFGNLWLLRCPTKASEEADEEGSASH 1069

Query: 947  ---ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGV-IAS 1000
               ER  L+  G  H    +  F    + M +  +++  G    +++  + G +G+ I  
Sbjct: 1070 LVHERSYLQ--GSPHRLTLMAHFFTQDIPMSIQKTNLVAGGRDCILWSGIQGTLGILIPF 1127

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 1060
            +  E   F + L+ +LR     + G +H  +RS+      V  K  +DGDL E +  L  
Sbjct: 1128 VSREDVDFFQTLEQHLRSEDAPLAGRDHLIYRSY-----YVPVKGVIDGDLCERYTLLPT 1182

Query: 1061 TRMDEISKTMNVSVEELCKRV 1081
             +   I+  ++ SV E+ +++
Sbjct: 1183 DKKQMIAGELDRSVREIERKI 1203


>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1213

 Score =  246 bits (627), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 288/1232 (23%), Positives = 512/1232 (41%), Gaps = 182/1232 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T   PT    + VGNF+  ++  +I++  TR+E+    PQ   +  ++   ++G I 
Sbjct: 4    YNLTLQPPTAALQAVVGNFSGARQQEIIVSHGTRLELLRPDPQTGKVVTVIATDVFGSIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D+  + ++  +  +L++DA++S               R    GQ    
Sbjct: 64   SLASFRLTGATKDYAILGSDSGRIIILEYDAKTSSFAKLHQETFGKSGARRIVPGQYLAT 123

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKF---LYG 171
            DP  R  +I       L  ++  D    L  +  +        +  +  LD+ F   +Y 
Sbjct: 124  DPKGRSVMIAAMEKAKLVYILNRDAAANLTISSPLEAHKNSSIIHHIVGLDVGFENPVYA 183

Query: 172  CAKPTIVVLYQD------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP-- 223
              +       QD       +  + +  YE+ L     V   WS+   D  A+LL+ VP  
Sbjct: 184  ALEVDYSESDQDPTGEAFKRAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLLVQVPGG 241

Query: 224  ----------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------ITKAYGR 260
                      P   GVL+  E+ I+Y   ++ +    IP R            IT A   
Sbjct: 242  QLASSDRFDGP--SGVLVCCEDHIIYRHMDSPQHRVPIPRRQHPLEDKERGVIITSAVMH 299

Query: 261  VDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +LL    G L  + I HE E+V  LKI+      +AS++  L +  +++ S +
Sbjct: 300  KMKGAFFFLLQSEDGDLFKVTIEHEDEEVKALKIKYFDTVPVASSLCILKSGFLFVASEF 359

Query: 321  GDSQLIKLN---------------------LQPDAKGSYVEVLERYVN----------LG 349
            G+  L +                        +P A    V    R ++          L 
Sbjct: 360  GNHYLYQFQKLGDDDEEPEFSSTSFPSSGMAEPQAALPRVYFKPRPLDNLALADELESLD 419

Query: 350  PIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
            PI+D  V++L       Q+    G     SLR +++G+ + E  S +L GI   +W+ + 
Sbjct: 420  PIIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWTTKR 479

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            + DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV   
Sbjct: 480  NEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPH 537

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHA 526
             +R V +  R   NEW+ P   ++  AT N  QV++A     LVY E+  DG L E +  
Sbjct: 538  GIRHVLADRRV--NEWRVPSNKTIVAATTNKRQVVVALSSAELVYFELDLDGQLNEYQDR 595

Query: 527  Q-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV 585
            + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     P S 
Sbjct: 596  KAMGSTVLALSIGDVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAPPSA 654

Query: 586  LLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L    
Sbjct: 655  ICIADMLDASINKAQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVL 714

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
                  + A S R  + Y+    + ++ +  + + +   F++   P+ L       L I 
Sbjct: 715  IHKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSVLRIF 774

Query: 697  TIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAIC-----------------SLKNQSCA 738
             +  +  KL   SIPL   PR+      +  F +                   L+ Q+ A
Sbjct: 775  HVPRLGIKLKQDSIPLSYTPRKFITYPLNNLFYLIEGDHRVMGQDAVDKKLNELRQQNRA 834

Query: 739  EESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
             + E+                     +R++D    + IS  PLD  E   S+    FS  
Sbjct: 835  IDQEVLNLSPEVFGRPKAANGTWASNIRIIDPVEGKTISVVPLDGNESAFSLAVVPFSAK 894

Query: 780  SN-VYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
             N ++  VGTA    + P        R+  F+ +  +L+L+ + E      +L AF G+L
Sbjct: 895  GNELHLVVGTAADTKLSPRTCSTGFLRVYKFLEDGRQLELVHKTEIDDVPLALMAFQGRL 954

Query: 836  LAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            +A + + +++Y    K MLR    ++  S          + + T+G  I+VGD+ +SI  
Sbjct: 955  VAGVGKALRIYDIGKKKMLRKVENKQFGSAI--------VTLSTQGSRILVGDMQESIFF 1006

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA--TDE--- 946
             +YK  E  +   A D    W+SA  ++D +  + A+   N+F  R +   +   DE   
Sbjct: 1007 AVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNIFVNRLDPRVSDQVDEDPT 1066

Query: 947  ------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                  E+G       + +++  +H+G+ +      SLV        G    +++  ++G
Sbjct: 1067 GAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKVSLV-------AGGREVLLYTGLHG 1119

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DGDL 
Sbjct: 1120 TIGILVPFVTKEDVDFISTLEQHMRTEQVSLVGRDHLGWRGY-----YVPVKAVVDGDLC 1174

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E +  L  ++   I+  ++ S+ E+ K++E+L
Sbjct: 1175 EMYAKLPGSKQSAIAGELDRSIGEVLKKLEQL 1206


>gi|331247470|ref|XP_003336363.1| DNA damage-binding protein 1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 962

 Score =  245 bits (626), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 249/928 (26%), Positives = 411/928 (44%), Gaps = 136/928 (14%)

Query: 261  VDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL----LGETSIASTISYLDNAVVYI 316
            VD   + +LLGD  G L  L +   K+  TG    L     G       + Y+ +  V++
Sbjct: 7    VDGVPNCWLLGDLYGNLIFLFL---KQSTTGTPPSLHYFHAGHVPSPEALVYITSGFVFL 63

Query: 317  GSSYGDSQLIKL-----NLQPDAKGS-YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTC 370
             S YGDSQL+KL     +L PD   S   EV+  + NL PI DFCV +  +    Q+VTC
Sbjct: 64   ASHYGDSQLLKLPSPTSSLNPDNTASAQPEVITTFPNLAPISDFCVTEDRKSLVNQIVTC 123

Query: 371  SGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTD----DPFDTFLVVSFISETR 426
            SG+++DGSLR++++GIGI E  S+E+ G++ +W+LRSST     + FD  LV+S    TR
Sbjct: 124  SGSHRDGSLRVIKHGIGIRESGSLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTR 183

Query: 427  ILAMNLEDELEETEI-EGFCSQTQTLFC------HDAIYNQLVQVTSGSVRLVSSTSREL 479
             LA+N +  +EE  +  GF S   T+         D+     +QVT  S ++++  +   
Sbjct: 184  FLALNEDGTIEEIGLFNGFESDVPTILAGNLLDGSDSTTRYSIQVT--SRKIIAGDAL-- 239

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP 539
               W+     S+  A  + +   ++     +V L I DG   E    +L  +IS L I+ 
Sbjct: 240  --VWEPDDAKSITRAALSVTTCAVSL-KEQVVVLCIKDGKFVEKGTYKLLNDISSLAID- 295

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS----Y 595
                       A   W    + I S+   + I + +   + +  S+ +  FEG       
Sbjct: 296  -----QSENFVAAAQWVTNCIEIISVSSSSTICRVNTDSDFMVNSLKMTNFEGTESDGCR 350

Query: 596  LLCALGDGHLLNFLLNMKTG---ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
            LL  LGDG ++N  L   TG   E    +  +LG +PI   +  +     ++A SD+PT+
Sbjct: 351  LLIGLGDGKIMNVALG-PTGMHVEGDSPRFTTLGIRPIEFVSMRNATGEFLWANSDQPTI 409

Query: 653  I--YSSNKKLLYSNVNLK--EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRS 708
            I    +N +  Y+ V ++   VS     ++  F DSL +A   E+ IG ++  +K++I  
Sbjct: 410  IDRIQNNGRFAYTPVTVQGGSVSSATGLHARFFQDSLVLASNDEIRIGKLNTTEKMNILK 469

Query: 709  IPLG-EHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV---RLLDDQTFEFISTYPLDT 764
            I LG E PRRI H E  + + +   + +   +   +H +   ++ DD+TF+         
Sbjct: 470  ISLGNEQPRRIAHSEDMKAYGVVCARLELDQDTGTIHRIGTFKVFDDETFQC-------- 521

Query: 765  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEK----- 819
                 SI +    ++   ++ +GT  +   E E T GRIL     + K  L A+K     
Sbjct: 522  ----SSIAAVKLGEEMIEHFVIGTGVIKSTEAEATIGRILAIRELNSKQDLTAKKRHFEL 577

Query: 820  ----ETKGAVYSLNAF-NGKLLAAINQKIQLYKWMLRD--------------------DG 854
                +  GAV  +    NG  +A+ N  +  +     D                    DG
Sbjct: 578  TNVGKLSGAVGGVGGLPNGMFVASANAFVHAFGLKKGDSGRAFPSGTDTVLAGSVPEMDG 637

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
               L    G  G  ++  V T G  ++VGDL KS+ LL +  E   +  +ARD++A  + 
Sbjct: 638  GFRLLDTWG--GGFVSQTVVTDGTKVLVGDLYKSVVLLEFDLEHLELAVKARDFSAMSVR 695

Query: 915  AVEILD--DDIYLGAENNFNL---------FTVRKNSEGATDEERGRLEVVG-------- 955
             +  +   D    G++   +            V  +  G +DE+  +   +         
Sbjct: 696  PIGAISERDPTSPGSDGKSDRPNQDAHREDHGVHLDDGGGSDEDEEQALELEQEEEEEED 755

Query: 956  -EYHLGEFVNRFR-----------------HGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 997
             +Y+   + +  +                  GSLV R  +S +     +IF T  G IG+
Sbjct: 756  QDYNQSSYHDHLQPPHSPTFDQDQNPAAYGGGSLVPRFIESSLIGETKLIFVTSTGGIGL 815

Query: 998  IASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 1056
            IA +   ++   L + Q++L K+   VG L H  +R F  E + + +  FLDGD +E  L
Sbjct: 816  IAKIHSKKKTKQLARFQSDLSKISTSVGNLAHSAYRMFKTESRKIPSMGFLDGDFLEGCL 875

Query: 1057 DLSRTRMDE-ISKTMNVSVEELCKRVEE 1083
            DL+   ++  + K M +  EE   +  E
Sbjct: 876  DLTPDEVENLVKKMMALKAEEAQAKATE 903


>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
            bisporus H97]
          Length = 1213

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 288/1232 (23%), Positives = 511/1232 (41%), Gaps = 182/1232 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T   PT    + VGNF+  ++  +I++  TR+E+    PQ   +  ++   ++G I 
Sbjct: 4    YNLTLQPPTAALQAVVGNFSGARQQEIIVSHGTRLELLRPDPQTGKVVTVIATDVFGSIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D+  + ++  +  +L++DA++S               R    GQ    
Sbjct: 64   SLASFRLTGATKDYAILGSDSGRIIILEYDAKTSSFAKLHQETFGKSGARRIVPGQYLAT 123

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKF---LYG 171
            DP  R  +I       L  ++  D    L  +  +        +  +  LD+ F   +Y 
Sbjct: 124  DPKGRSVMIAAMEKAKLVYILNRDAAANLTISSPLEAHKNSSIIHHIVGLDVGFENPVYA 183

Query: 172  CAKPTIVVLYQD------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP-- 223
              +       QD       +  + +  YE+ L     V   WS+   D  A+LL+ VP  
Sbjct: 184  ALEVDYSESDQDPTGEAFKRAEKMLTYYELDLGLNHVVRK-WSEPT-DPRANLLVQVPGG 241

Query: 224  ----------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------ITKAYGR 260
                      P   GVL+  E+ I+Y   ++ +    IP R            IT A   
Sbjct: 242  QLASSDRFDGP--SGVLVCCEDHIIYRHMDSPQHRVPIPRRQHPLEDKERGVIITSAVMH 299

Query: 261  VDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +LL    G L  + I HE E+V  LKI+      +AS++  L +  +++ S +
Sbjct: 300  KMKGAFFFLLQSEDGDLFKVTIEHEDEEVKALKIKYFDTVPVASSLCILKSGFLFVASEF 359

Query: 321  GDSQLIKLN---------------------LQPDAKGSYVEVLERYVN----------LG 349
            G+  L +                        +P A    V    R ++          L 
Sbjct: 360  GNHYLYQFQKLGDDDEEPEFSSTSFPSSGMAEPQAALPRVYFKPRPLDNLALADELESLD 419

Query: 350  PIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
            PI+D  V++L       Q+    G     SLR +++G+ + E  S +L GI   +W+ + 
Sbjct: 420  PIIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWTTKR 479

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            + DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV   
Sbjct: 480  NEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPH 537

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHA 526
             +R V +  R   NEW+ P    +  AT N  QV++A     LVY E+  DG L E +  
Sbjct: 538  GIRHVLADRRV--NEWRVPSNKIIVAATTNKRQVVVALSSAELVYFELDLDGQLNEYQDR 595

Query: 527  Q-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV 585
            + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     P S 
Sbjct: 596  KAMGSTVLALSIGDVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAPPSA 654

Query: 586  LLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L    
Sbjct: 655  ICIADMLDASINKAQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVL 714

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
                  + A S R  + Y+    + ++ +  + + +   F++   P+ L       L I 
Sbjct: 715  IHKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSVLRIF 774

Query: 697  TIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAIC-----------------SLKNQSCA 738
             +  +  KL   SIPL   PR+      +  F +                   L+ Q+ A
Sbjct: 775  HVPRLGIKLKQDSIPLSYTPRKFITYPLNNLFYLIEGDHRVMGQDAVDKKLNELRQQNKA 834

Query: 739  EESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
             + E+                     +R++D    + IS  PLD  E   S+    FS  
Sbjct: 835  IDQEVLNLSPEVFGRPKAANGTWASNIRIIDPVEGKTISVVPLDGNESAFSLAVVPFSAK 894

Query: 780  SN-VYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
             N ++  VGTA    + P        R+  F+ +  +L+L+ + E      +L AF G+L
Sbjct: 895  GNELHLVVGTAADTKLSPRTCSTGFLRVYKFLEDGRQLELVHKTEIDDVPLALMAFQGRL 954

Query: 836  LAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            +A + + +++Y    K MLR    ++  S          + + T+G  I+VGD+ +SI  
Sbjct: 955  VAGVGKALRIYDIGKKKMLRKVENKQFGSAI--------VTLSTQGSRILVGDMQESIFF 1006

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA--TDE--- 946
             +YK  E  +   A D    W+SA  ++D +  + A+   N+F  R +   +   DE   
Sbjct: 1007 AVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNIFVNRLDPRVSDQVDEDPT 1066

Query: 947  ------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                  E+G       + +++  +H+G+ +      SLV        G    +++  ++G
Sbjct: 1067 GAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKVSLV-------AGGREVLLYTGLHG 1119

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DGDL 
Sbjct: 1120 TIGILVPFVTKEDVDFISTLEQHMRTEQVSLVGRDHLGWRGY-----YVPVKAVVDGDLC 1174

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E +  L  ++   I+  ++ S+ E+ K++E+L
Sbjct: 1175 EMYAKLPGSKQSAIAGELDRSIGEVLKKLEQL 1206


>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1214

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 283/1229 (23%), Positives = 514/1229 (41%), Gaps = 175/1229 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T   PT VT + VGNF+  ++  +I++  TR+E+    PQ   +  ++   ++G I 
Sbjct: 4    YNLTLQPPTAVTQAIVGNFSGARQQEIIVSHGTRLELLRPDPQTGKVATVIATDVFGSIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D+  + ++  +  +L +D ++S  +            R    GQ    
Sbjct: 64   SLAAFRLTGGTKDYAIVGSDSGRIVILDYDPKTSSFVKLHQETYGKSGARRIVPGQYLAT 123

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKFLYGCAK 174
            DP  R  +IG      L  ++  D    L  +  +        +  +  LD+    G   
Sbjct: 124  DPKGRAVMIGAMEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGLDV----GYEN 179

Query: 175  PTIVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D             N   + +  YE+ L     V    S   +D  A+LL+ 
Sbjct: 180  PMFAALEVDYTESDQDPSGEAFNNAEKMLTYYELDLGLNHVVRK--SSEPVDPRANLLVQ 237

Query: 222  VP----------PPLCGVLIIGEETIVYCSANAFK---AIPIR------PS----ITKA- 257
            VP          P   GVLI  E+ I+Y   +  +    IP R      P     IT A 
Sbjct: 238  VPGGQTGDRFDGP--SGVLICCEDHIIYRHPSGSQHRVPIPRRRHPLDDPERGVIITFAL 295

Query: 258  YGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIG 317
              ++  D    L  +   L  + +  +  E V  LKI+      +A+ +  L +  +++ 
Sbjct: 296  MHKIKGDFFFLLQSEEGDLFKVTIDYNGDEDVNALKIKYFDTVPVATGLCILKSGFLFVA 355

Query: 318  SSYGDSQLIKLNLQPD-------AKGSY------------------------VEVLERYV 346
            S +GD  L +     D       +   Y                        + +L+   
Sbjct: 356  SEFGDHHLYQFQKLGDDDDEPEFSSADYPQRGMAYPSQALPRAWFRPRPLDNLALLDTVE 415

Query: 347  NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWS 404
            +L PI+D  V++L       Q+    G     + R +R+G+ + E  S +L GI   +W+
Sbjct: 416  SLSPIIDARVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEETVSSDLPGIPNAVWT 475

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
             +   DD  D+++++SF++ T +L++   + +EE +  GF S   T+       + L+QV
Sbjct: 476  TKLKEDDAHDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTIAVQQIGADALLQV 533

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 523
                +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  +G L E 
Sbjct: 534  HPQGIRHVLADRRV--NEWRVPAGKTIVTATTNKRQVVVALSSAELVYFELDLEGQLNEY 591

Query: 524  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 581
            +  + +   +  L I  + E    +   AVG   D +VRI SL P+  L T         
Sbjct: 592  QDRKAMGSTVLALSIGEVPEGRQRTPFLAVGC-EDQTVRIISLDPESTLETISLQALTAP 650

Query: 582  PRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
            P ++ +      S        ++   L +G LL  +L+   G+LTD +   LGT+P+ L 
Sbjct: 651  PTAICIADMLDASINKVHPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPVRLI 710

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
              + +    + A S R  + Y+ +  + ++ +  + +     F++   PD L       L
Sbjct: 711  RVNVQRNPAILALSSRSWLNYTHHNLMHFTPLIFENLDFAWSFSAELCPDGLIGIAGSVL 770

Query: 694  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES----------- 741
             I  I  +  KL   ++PL   PR+      +R F +    +++  EE+           
Sbjct: 771  RIFQIPRLGTKLKQDAMPLTYTPRKFIPHPANRYFYLIEGDHRTWGEEAVQKKVAELRQA 830

Query: 742  ------EM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 776
                  EM                     +R++D    + ++T P+D  E   SI    +
Sbjct: 831  GKQVDEEMLSLPADTFGRPKAPAGTWASLIRIIDPVDAKTVATIPIDNNECAFSIAVVPW 890

Query: 777  -SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 832
             +    ++  VGTA   ++ P        R   F  E   L+L+ + ET     ++ AF 
Sbjct: 891  AARGGELHLVVGTAQDTFLAPRSCTSGFLRTYAFTNEGAGLELLHKTETDDVPMAVMAFQ 950

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISL 891
            G+L+A + + +++Y     D G ++L  +  +     A+  + T+G  I+VGD+ +S++ 
Sbjct: 951  GRLVAGVGKSLRIY-----DIGKKKLLRKVENKSFATAIVTLATQGSRILVGDMQESMAY 1005

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 948
             +YK  E  +   A D    W+S+  ++D +  +  +   N+F  R   K SE   D+  
Sbjct: 1006 AVYKPPENRLLVFADDVQPRWISSSTMVDYNTVIAGDRFGNVFVNRLDAKVSEQVDDDPT 1065

Query: 949  G------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----TVIFGTVNGVIGVI 998
            G      +  ++G  H  + +  +  G +V  L  S V  +P     +++  ++G IGV+
Sbjct: 1066 GAGILHEKGLLMGAPHKTKMLCHYHVGDIVTSL--SKVALVPGGREVILYTGLHGTIGVL 1123

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIK--GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
               +  E   F+  L+ ++R  +   G+ G +H  WR +      V  K  +DGDL E+F
Sbjct: 1124 VPFVSKEDVDFISTLEQHMRTELTQFGLVGRDHLSWRGY-----YVPVKAVVDGDLCEAF 1178

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L   +   I+  ++ +V E+ K++++L
Sbjct: 1179 ATLPAPKQSSIAGELDRTVGEVLKKLDQL 1207


>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
            MF3/22]
          Length = 1213

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 286/1237 (23%), Positives = 503/1237 (40%), Gaps = 186/1237 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPI 58
            ++ Y +T   PT  TH+ VGNF+  ++  +I++  +R+E  LL P      +  ++    
Sbjct: 1    MYLYNLTLQPPTAATHAIVGNFSGARQQEIIVSHGSRLE--LLRPDVQTGKISTVIANDA 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G I +L  FR  G  +D+  + ++  +  +L++D ++S  I            R    G
Sbjct: 59   FGSIRSLAAFRLTGGTKDYAILGSDSGRIVILEYDPKTSSFIKLHQETYGKSGARRIVPG 118

Query: 119  QIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKF- 168
            Q    DP  R + +   +   L  ++  D    L  +  +        +  +  +D+ F 
Sbjct: 119  QYLATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNAAIIHHIVGVDVGFE 178

Query: 169  --LYGCAKPTIVVLYQD------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
              LY   +       QD      N   + +  YE+ L     V   WS+   D  A+LL+
Sbjct: 179  NPLYAALEVDYTESDQDPTGEAFNNAEKLLTFYELDLGLNHVVRK-WSEPT-DPRANLLV 236

Query: 221  PVP------------PPLCGVLIIGEETIVYCSANAFK---AIPIR--PSITKAYGRVDA 263
             VP            P   GVL+  E+ I+Y + ++ +    IP R  P   K  G +  
Sbjct: 237  QVPGGQLATSDRFDGP--SGVLVCCEDHIIYRNMDSPQHRVPIPRRRHPLEDKERGLIIV 294

Query: 264  DGSR--------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
                        +LL    G L+ + I HE E V  LKI+      +AS++  L +  ++
Sbjct: 295  SAVMHKMKGAFFFLLQSEEGDLYKVTIDHEDEDVRALKIKYFDTVPVASSLCILKSGFLF 354

Query: 316  IGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLG-------------------------- 349
            + S +G+  L +     D           Y N G                          
Sbjct: 355  VASEFGNHHLYQFQKLGDDDNEPEFSSTDYPNFGMADPTVPLPAAYFKPRPLDNLVLADE 414

Query: 350  -----PIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGM 402
                 PI+D  V++ L      Q+    G     S R +R+G+ + E  S +L GI   +
Sbjct: 415  IESLDPIIDSKVMNILPNSDTPQIFAACGRGARSSFRTLRHGLEVEEVVSSDLPGIPNAV 474

Query: 403  WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV 462
            W+ R   DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+
Sbjct: 475  WTTRIKEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALL 532

Query: 463  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILT 521
            QV    +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  +G L 
Sbjct: 533  QVHPQGIRHVLADRRV--NEWRVPQGRTIVAATTNKRQVVVALSSAELVYFELDLEGQLN 590

Query: 522  EVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
            E +  + +   +  L +  +      +   AVG   D +VRI SL   + +    L    
Sbjct: 591  EYQDRKAMGSTVLALSVGEVPPGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQALT 649

Query: 581  IPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
             P S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+P+ 
Sbjct: 650  APPSAICIADMLDSSIDKNQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVK 709

Query: 632  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
            L     +  + + A S R  + Y+    L ++ +  + + H   F++   P+ L      
Sbjct: 710  LMRVQVQRNSSILALSSRSWLNYTHQGLLHFTPLIFETLDHAWEFSAELCPEGLIGISGS 769

Query: 692  ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-----------------AICSLK 733
             L I  I  +  KL   S+PL   PR+      ++ F                  +  L+
Sbjct: 770  VLRIFQIPRLGTKLKQDSMPLTYTPRKFIPHPMNQYFYMIEADHRVMGDDAAKEKLAELR 829

Query: 734  NQSCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSC 774
             +    + E+                     +R+LD      +    LD  E   SI   
Sbjct: 830  QRGVKYDQEVVDLPPEVFGRPKAPAGTWGSCIRILDPINKATVKVVHLDNNEAAFSIAIV 889

Query: 775  SF-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 830
             F + +S ++ CVGTA   ++ P        R   F      L+L+ + E      +L A
Sbjct: 890  PFAARNSELFLCVGTASSTFLAPRSCSSGFIRTYAFTNGGADLELVHKTEADDVPMALMA 949

Query: 831  FNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 886
            F G+L A + + +++Y    K +LR   T+   S          + + T+G  I+VGD+ 
Sbjct: 950  FQGRLCAGVGKSLRIYEIGKKKLLRKVETKTYGSAI--------VTLNTQGSRIIVGDMQ 1001

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE--GAT 944
            +SI   ++K  E  +   A D    W ++  ++D       +   N+F  R +S+     
Sbjct: 1002 ESIVYAVFKPPENRLLIFADDSQPRWTTSAVMVDYTTIAAGDKFGNVFINRLDSKISDQV 1061

Query: 945  DE---------ERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
            DE         E+G L        ++  +H+G+ V      SLV        G    +++
Sbjct: 1062 DEDPTGAGILHEKGLLMGAPHKTGMIAHFHVGDIVTSIHKISLV-------AGGREVLLY 1114

Query: 989  GTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
              ++G IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +
Sbjct: 1115 TCLHGTIGILVPFVSKEDVDFISTLEQHMRSEKLSLVGRDHLAWRGY-----YVPVKAVV 1169

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E F  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1170 DGDLCEQFARLPANKQSAIAVELDRTVGEVLKKLEQL 1206


>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
 gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
          Length = 1216

 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 257/1033 (24%), Positives = 453/1033 (43%), Gaps = 155/1033 (15%)

Query: 179  VLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIV 238
            V YQ  K  + +  YE+ L     V+   S   +D  A+LLI +P PL GVL+  E  I 
Sbjct: 206  VAYQSLK--KMLTIYELDLGKNTIVKK--SSEEIDRSANLLIQIPEPLGGVLVCSENYIT 261

Query: 239  YCSA---NAFKAIPIRPSITKAYG--------RVDADGSRYLLG-DHAGLLHLLVITHEK 286
            Y      +    IP R  + +  G        +V   G  +LL  +  G L+ +    + 
Sbjct: 262  YKKEGQDDVRSPIPRRSGMPQERGLMIINSNLKVKKGGDIFLLAQNELGDLYRVSFNKDG 321

Query: 287  EKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL------------------ 328
             +V+ + ++      ++++   L N  ++  S +GD +  K+                  
Sbjct: 322  NRVSSVSLQYFDTIPVSNSFLALKNGNLFCASEFGDHKCYKITKIEPNEYPETYESIGSE 381

Query: 329  ------------------NLQPDAKG-SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVT 369
                              N QP     + +E++    +L P+ D  V DL  +G  Q+  
Sbjct: 382  TFPTFTPPMNRFEALMSDNDQPSTTNVTCLELVNEIKSLAPVTDMKVTDLMGEGTPQIYC 441

Query: 370  CSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLVVSFISETRIL 428
             +G     SLR +R G+ +NE+ +  L Q    +++++ S +D FD ++++SF   T +L
Sbjct: 442  LNGRGPTSSLRSLRYGLPVNEEVAAPLDQQATAIFTVKESMNDTFDKYIILSFSEFTMVL 501

Query: 429  AMNLEDELEETEIEGFCSQTQTLFCHD-AIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 487
            ++  E+  E TE  GF + T+T++  +     + VQV    +R +     +  NEW S  
Sbjct: 502  SVG-ENVAEVTE-SGFLTTTKTIYASNIGESGEFVQVHPKGIRHIHP---DRVNEWNSG- 555

Query: 488  GYSVNVATANASQVLLATGGGHLVYLE--IGDGILTEVKHAQLEYEISCLDINPIGENPS 545
               +  A  N  Q++++  GG ++Y E     G L E +   L  +++CL ++PI +  +
Sbjct: 556  NKIIEKAAVNGYQIVVSLSGGEIIYFEYDTSSGNLIETERNDLSQDVACLALSPIQDGRT 615

Query: 546  YSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAF-------EGISY 595
              +  AVG + D +VR+ SL +   +++++++ L  +  P S+ L          E   Y
Sbjct: 616  RGRFLAVGFY-DKTVRLISLGEYDMMSILSRQALPAD--PESLSLIELQSGHSRDETSLY 672

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            L   L +G LL   ++  TGEL+D +   LGT+ + LR    +    + A S +P +  S
Sbjct: 673  LNIGLSNGILLRSTVDSSTGELSDTRSRFLGTKGVKLRNVKVRGDNAILALSSKPWLGNS 732

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD-IQKLHIRSIPLGEH 714
             N K+  + ++   ++  C F+S    D L       L I TI   + K     IPL   
Sbjct: 733  INGKIEMTPLSYPALNSACNFSSEQIRDGLVSITAEHLRIITISSLLDKFTPEIIPLNYT 792

Query: 715  PRR-ICHQEQSRTFAICSLKNQSCAEESEM-HFVR---------LLDDQTFEFISTYP-- 761
            PR+ + H E S    + +  N S    ++   +++         L  D  +  I T P  
Sbjct: 793  PRKFVVHDETSHMIILQTDHNVSKENSTDRPDYIKVDESQKDPSLSKDVEYGAIKTKPKS 852

Query: 762  -----------------LDTFEY-----GCSILSCSFS------DDSNVYYCVGTAYVLP 793
                             LD FE        SI +C FS        +     VGTA  + 
Sbjct: 853  NLWASYIRVYSPKKQANLDEFEIEDNEAAFSITTCKFSTSLSGAKSNESLIIVGTAKNM- 911

Query: 794  EENEPTK----GRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
             +  PT+    G I VF I EDGKLQLI + E +   Y+L+AF G+LL  +   +++Y  
Sbjct: 912  -KLYPTRTCDCGYINVFQISEDGKLQLIHKTEVEDVPYALHAFRGRLLVGVKNMLRIY-- 968

Query: 849  MLRDDGTRELQSECGHHGHI-LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
               D G ++L  +C +         +   G+ I VGD+ +S   + +   E ++   A +
Sbjct: 969  ---DLGKKKLLRKCENKSFPNFITSIAVDGNRIFVGDITESFHFVKFNSSENSLTIFADN 1025

Query: 908  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE-------------ERGRLEVV 954
                W++A  ++D +   G +   N F  R  S+  +DE             ERG L   
Sbjct: 1026 TTPRWLTASALVDHNTIAGGDKFGNFFISRLPSD-VSDELEDSSTGKEKWIWERGLLN-- 1082

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASLPHEQYL-FLEK 1011
            G       + +F  GS++  +  + +  G    +I+ T+ G +GV      ++ + F  +
Sbjct: 1083 GAPQKATEIVKFYVGSMITSIYKTSLIAGGPSILIYTTITGAVGVFFPFTSKKDIEFFTQ 1142

Query: 1012 LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
            L+ +LR+    + G +H  +RS+    K+V     +DGDLIE F D+      +IS+ + 
Sbjct: 1143 LEMHLREKNPPLCGRDHLAYRSYYFPVKSV-----VDGDLIEQFNDVDLQTKTKISEDLQ 1197

Query: 1072 VSVEELCKRVEEL 1084
             ++ E+ K++E++
Sbjct: 1198 RTINEIAKKIEDM 1210


>gi|302680006|ref|XP_003029685.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
 gi|300103375|gb|EFI94782.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
          Length = 1213

 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 288/1231 (23%), Positives = 495/1231 (40%), Gaps = 180/1231 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T   PT    + VGNF+  +   ++I    R+E  LL P      L  ++   ++G 
Sbjct: 4    YNLTLQPPTAAVQAVVGNFSGARTQEIVICHGPRLE--LLRPDVQTGKLTTVIATDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I ++  FR  G  +D L + ++  +  +L +D +S+  +            R    GQ  
Sbjct: 62   IRSIAAFRLTGGTKDHLILGSDSGRIVILDYDPKSTSFVKLHQETYGKSGARRIVPGQYL 121

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  +IG      L  ++  D    L  +  +   +   +    +    G   P 
Sbjct: 122  ATDPKGRAVMIGAMEKSKLVYILNRDAAANLTISSPLEAHKNSAIIHHIVGVDVGFENPI 181

Query: 177  IVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  D             N  A+ +  YE+ L     V   WS+   D  A+LL+ VP
Sbjct: 182  FAALEVDYSESDQDPTGEAFNNAAKMLTYYELDLGLNHVVRK-WSEPT-DPRANLLVQVP 239

Query: 224  ------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------ITKAY 258
                        P   GVLI  E+ I+Y   +A +    IP R            I  A 
Sbjct: 240  GGQLASSDRFDGP--SGVLICCEDHIIYRHMDAPQHRVPIPRRKHPLEDPERGIIIVAAV 297

Query: 259  GRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGS 318
                     +LL    G L  + I HE E V  +KI+      +AS +  L +  +++ S
Sbjct: 298  MHKMKGAFFFLLQSEDGDLFKVTIEHEDEDVKEVKIKYFDTVPVASALCILKSGFLFVAS 357

Query: 319  SYGDSQLIKLNLQPD-------AKGSY------------------------VEVLERYVN 347
             +G+  L +     D       +  SY                        + + +   +
Sbjct: 358  EFGNHYLYQFQKLGDDDDEPEFSSSSYPQFGMADSSMPLPHVHFKPHPLDNLALADEVES 417

Query: 348  LGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            L PI+D  V++L       Q+    G     SLR +R+G+ + E  S +L GI   +W+ 
Sbjct: 418  LDPIIDSKVLNLMPNSDTPQIFAACGRGPRSSLRTLRHGLEVEESVSSDLPGIPNAVWTT 477

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            +   DD FD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV 
Sbjct: 478  KKKEDDAFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQVH 535

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 524
               +R V S  R   NEW+ P G S+  AT N  QV++A     LVY E+  DG L E +
Sbjct: 536  PQGIRHVLSDRRV--NEWRVPQGKSIVQATTNKRQVVVALSSAELVYFELDLDGQLNEYQ 593

Query: 525  HAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
              + +   +  L I  + E    +   AVG   D +VRI SL P+  L T         P
Sbjct: 594  DRKAMGSTVLALSIGEVPEGRQRTPFLAVGC-EDQTVRIISLDPESTLDTISLQALTAPP 652

Query: 583  RSVLLCAF--------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             S+ +               ++   L +G LL  +L+  TG+LTD +   LGT+P+ L  
Sbjct: 653  SSICIAEMLDAAINKTHPTMFVNIGLQNGVLLRTVLDPMTGQLTDTRTRFLGTRPVKLVR 712

Query: 635  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
             + +    + A S R  + Y+    + ++ +  + +     F++   P+ L       L 
Sbjct: 713  VAIQRNPAIMALSSRSWLNYTHQNMVHFTPLIFENLDFAWSFSAELSPEGLIGITGSVLR 772

Query: 695  IGTIDDIQ-KLHIRSIPLGEHPR------------------RICHQEQSRTFAICSLKNQ 735
            I  I  +  KL   S+PL   PR                  R+   E +R   +  +   
Sbjct: 773  IFQIPKLGVKLKQDSLPLSYTPRKFITHPNNHYFYMIESDHRVYGDETAREKILDQMSRG 832

Query: 736  SCAEESEMHF------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
               +E  ++                   +R++D      ++  PLD  E   SI    FS
Sbjct: 833  KAVDEDVVNLPVTEFGRVKAPAGTWGSCIRIIDPTQNSTVAVIPLDNNEAAFSIAVVPFS 892

Query: 778  -DDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNG 833
              +  ++  VGTA    V P        R   F  +   L+L  + ET     +L AF G
Sbjct: 893  ARNGELFLVVGTAANTRVSPRTCSSGYLRTYQFTNDGAGLELHHKTETDDVPLALLAFQG 952

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH-ILALYVQTRGDFIVVGDLMKSISLL 892
            +L A + + +++Y     D G ++L  +  + G     + + T+G  I+ GD+ +S+   
Sbjct: 953  RLAAGVGKALRIY-----DIGKKKLLRKAENKGFGTTIVTLNTQGSRIIAGDMQESLFYA 1007

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG 949
            +YK  E  +   A D    W+SA  ++D       +   N+F  R   K SE   D+  G
Sbjct: 1008 VYKAPENRLLVFADDSQPRWISAATMVDYYTVAAGDRFGNVFVNRLDYKVSEQVDDDPTG 1067

Query: 950  ---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
                           + +++  +H+G+ +      +LV        G    +++  ++G 
Sbjct: 1068 AGILHEKGILMGAPHKTKLLCHFHVGDLITSIHKVALV-------AGGREVLLYTGLHGT 1120

Query: 995  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
            IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DGDL E
Sbjct: 1121 IGMLVPFVSKEDVDFISTLEQHMRSEQSSLVGRDHLSWRGY-----YVPVKAVVDGDLCE 1175

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +F  L  ++   I+  ++ +V E+ K+++ L
Sbjct: 1176 TFAKLPASKQSAIANELDRTVGEVLKKLDSL 1206


>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
          Length = 1221

 Score =  243 bits (619), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 300/1220 (24%), Positives = 518/1220 (42%), Gaps = 170/1220 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T   P NV  + +G F   +E  +I    +++ +    P    +  +L   ++G I 
Sbjct: 10   YSLTVQPPNNVVQAVLGQFAGTKEQLIITGAGSQLTLLRPDPSLGKVTTVLSHNVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D+L IA++  +  ++++    +      +        R    G+    
Sbjct: 70   SLAAFRLAGSNKDYLIIASDSGRITIVEYLPAQNRFSRLHLETFGKSGVRRVIPGEYLAC 129

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  LI     + L  V+    + +L  +  +   +  VL I  +    G A P   
Sbjct: 130  DPKGRACLIASTEKNKLVYVLNRSAQAELTISSPLEAHKPGVLVISMVALDVGYANPVFA 189

Query: 179  VLYQDNKDA---------RHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIPVP-- 223
             L  D  D            V+T    YE+ L     V   WS+  +D  A LL  VP  
Sbjct: 190  ALEMDYSDVDQDSSGQALEEVETQLVYYELDLGLNHVVRK-WSEP-VDPTASLLFQVPGG 247

Query: 224  ---PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHAG 275
               P   GVL+ GEE+I Y  +N  AF+  IP R   T+  +  R+   G  + L   AG
Sbjct: 248  NDGP--SGVLVCGEESITYRHSNQDAFRVPIPRRKGATEDPSRKRIIVSGVMHKLKGSAG 305

Query: 276  LLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIG 317
                L+ T + +                  +V  LKI+      +A+++  L +  +YI 
Sbjct: 306  AFFFLLQTEDGDLFKVTIDMVEDEEGSPTGEVRRLKIKYFDTVPVATSLCILKSGFLYIA 365

Query: 318  SSYGD---SQLIKL------------NLQPDAKGSY------------VEVLERYVNLGP 350
            S +G+    Q  KL            +   D + SY            + ++E   ++ P
Sbjct: 366  SQFGNFSFYQFEKLGDDDEELEFSSDDFPVDPQASYDPVYFHPRPAENLALVESIPSMNP 425

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  V +L  +   Q+ T  G     + R++R+G+ +NE  + EL GI   +W+L+ + 
Sbjct: 426  LLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVASELPGIPSAVWTLKLNR 485

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
             + +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV    +
Sbjct: 486  GEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFSTSVPTLAAQLLGDDGLIQVHPKGI 543

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQL 528
            R V +      NEW +P   S+  A+ NA QV +A   G +VY E+  DG L E    + 
Sbjct: 544  RHVRNGKV---NEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDEKKE 600

Query: 529  EY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
             +  ++CL +  + E  + S   AVG   D +VRI SL P+  L +K        P S+ 
Sbjct: 601  MFGTVTCLSLGEVPEGRARSSFLAVGC-DDCTVRILSLDPESTLESKSVQALTAAPSSLA 659

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + A +  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   + + T
Sbjct: 660  IIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGT 719

Query: 641  THVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            T V   S RP + YS    K  + + +N  ++     F+S    + +   +   L I +I
Sbjct: 720  TCVLGLSSRPWLGYSDPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFSI 779

Query: 699  DDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICS--------LKNQSCAEESEMHF-VR 747
            D +   L  ++I L   P++ I H EQ   + I S        L+ Q  A+ + ++   +
Sbjct: 780  DRLGDTLTQKAISLTYTPKKLIKHPEQPLFYTIESDNNTLPPDLRAQLIADPAVVNGDTK 839

Query: 748  LLDDQTF-----------------------EFISTYPLDTFEYGCSILSCSF-SDDSNVY 783
            +L  + F                       + + T  L+  E   S     F S D+  +
Sbjct: 840  VLPPEEFGYPKGNRRWASCINVIDPVSEEPQVVQTVDLENNEAAVSAAIVPFASQDNESF 899

Query: 784  YCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
              VGT     V P         +  F  E  +L+ I + + +    +L  F GKLLA + 
Sbjct: 900  LIVGTGKDIVVNPRNFSEAYIYVYRFQEEGRELEFIHKTKIEEPALALIPFQGKLLAGVG 959

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            + +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++ + YK     
Sbjct: 960  KTLRVYDLGMR-QMLRKAQAEVAPQ-QIVSL--NTQGSRIIVGDVQQGVTYVTYKPTTNK 1015

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG-------- 949
            +   A D  A W++   ++D +   G +   N+F VR   K SE A +E+ G        
Sbjct: 1016 LIPFADDIIARWITCTTMVDYESVAGGDKFGNMFIVRCPPKASEEADEEQSGLHLMNARD 1075

Query: 950  -------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASL 1001
                   RL+++  ++  +        SLV       VG    +++  + G IGV I  +
Sbjct: 1076 YLHGTSQRLDLMCHFYTQDIPTSMAKTSLV-------VGGQDVLLWSGLMGTIGVFIPLI 1128

Query: 1002 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
              E   F + L+++LR     + G +H  +RS+         K  +DGDL E +  L   
Sbjct: 1129 SREDADFFQSLESHLRTEDPPLAGRDHLMYRSY-----YAPVKGIIDGDLCERYTLLPND 1183

Query: 1062 RMDEISKTMNVSVEELCKRV 1081
            +   I+  ++ SV E+ +++
Sbjct: 1184 KKQMIAGELDRSVREIERKI 1203


>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1212

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 297/1225 (24%), Positives = 512/1225 (41%), Gaps = 174/1225 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNV  + +G F   +E  +I    +  ++ LL P   Q     +L   I+G 
Sbjct: 10   YSLTVQPPTNVVQAVLGQFAGTREQLIITGAGS--QLTLLRPDPSQGKVITLLSHDIFGI 67

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+L +AT+  +  ++++    +      +        R    G+  
Sbjct: 68   IRSLAAFRLAGSNKDYLILATDSGRITIIEYLPAQNRFQRLHLETFGKSGVRRVIPGEYL 127

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  LI     + L  V+  +++ +L  +  +   +  VL I  +    G + P 
Sbjct: 128  ACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNPV 187

Query: 177  IVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  D  +     +             YE+ L     V   WS + +D  A LL  VP
Sbjct: 188  FAALEIDYSEVDQDSSGQAMEDLETQLVYYELDLGLNHVVRR-WS-DPVDPTASLLFQVP 245

Query: 224  -----PPLCGVLIIGEETIVYCSAN--AFK-AIPIRPSITK--AYGRVDADGSRYLLGDH 273
                 P   GVL+ GEE I Y  +N  AF+ AIP R   T+     R    G  + L   
Sbjct: 246  GGNDGP--SGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGS 303

Query: 274  AGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVY 315
            AG    L+ T + +                  +V  LKI+      +AS++  L +  +Y
Sbjct: 304  AGAFFFLLQTEDGDLFKLSIDMVEDEDGNPTGEVKRLKIKYFDTVPVASSLCILKSGFLY 363

Query: 316  IGSSYGDS---------------QLIKLNLQPDAKGSY------------VEVLERYVNL 348
            + S +G+                + I  +   D + SY            + ++E    +
Sbjct: 364  VASQFGNYSFYQFEKLGDDDEELEFISDDFPADPRASYDPVYFHPRPTENLALVESIPAM 423

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI   +W+L+ 
Sbjct: 424  NPLLDCKVANLTGEDAPQIYTICGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWTLKL 483

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  + +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV   
Sbjct: 484  NRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPK 541

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA 526
             +R V +      NEW +P   S+  A+ANA QV +A   G +VY E+  DG L E    
Sbjct: 542  GIRHVRNGHI---NEWAAPQHRSIVAASANAHQVAIALSSGEIVYFEMDADGSLAEYDEK 598

Query: 527  QLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            +  +  ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P S
Sbjct: 599  KEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPDSTLENKSVQALTAAPTS 657

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   + +
Sbjct: 658  LAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEVRLFQVTVQ 717

Query: 639  NTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              T V   S RP + Y     K  + + +N  ++     F+S    + +   +   L I 
Sbjct: 718  GKTCVLGLSSRPWLGYPDPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIF 777

Query: 697  TIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV--------- 746
             ID +    I +SIPL   P+++    +   F      N +   E     +         
Sbjct: 778  NIDRLGDTLIQKSIPLTYTPKKLVKHPEQPLFYTIEADNNTLPPELRAQLLADPNVVNGD 837

Query: 747  -RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSCSF-SDDSN 781
             ++L  + F +                       + T   +  E   S    SF S D+ 
Sbjct: 838  SQVLPPEDFGYPRANRRWASCINVVDPLSEEGQVLQTVHFENNEAAVSATVVSFASQDNE 897

Query: 782  VYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
             +  VGT   ++      ++G + ++  VEDG+ L+ I + + +    +L  F GK+  A
Sbjct: 898  NFLVVGTGKDMIVNPQSYSEGYLYIYRFVEDGRELEFIHKTKIEEPPLALLPFQGKVAVA 957

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            +  ++++Y   +R    R+ Q+E      I++L   T+G  IVVGD+ + ++L++YK   
Sbjct: 958  VGTQLRIYDLGMR-QMLRKAQAEVSAQ-RIVSL--NTQGSRIVVGDVQQGVTLVVYKSAT 1013

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------ 949
              +   A D  A W +   ++D +   G +   N+F VR   K SE A +E+ G      
Sbjct: 1014 NKLIPFADDTVARWTTCTTMVDYESIAGGDKFGNMFIVRCPEKASEEADEEQSGLHLINA 1073

Query: 950  ---------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IA 999
                     RL ++  ++  +        SLV       VG    +++  + G IGV I 
Sbjct: 1074 RDYLHGTPHRLGLMCHFYTQDVPTSITKTSLV-------VGGQEILLWSGIMGTIGVFIP 1126

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  E   F + L+ +LR     + G +H  +R +    K V     +DGDL E +  L 
Sbjct: 1127 FVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGV-----IDGDLCERYNLLP 1181

Query: 1060 RTRMDEISKTMNVSVEELCKRVEEL 1084
              +   I+  ++ SV E+ +++ ++
Sbjct: 1182 NDKKQMIAGELDRSVREIERKISDI 1206


>gi|392593521|gb|EIW82846.1| hypothetical protein CONPUDRAFT_81012 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1213

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 284/1233 (23%), Positives = 511/1233 (41%), Gaps = 184/1233 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T   PT V  + VGNF+  +   +I++  TR+E  LL P      L  ++   ++G 
Sbjct: 4    YNLTLQPPTAVAQAIVGNFSGARTQEIIVSHGTRLE--LLRPDVQTGKLSTVIASDVFGS 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+  + ++  +  +L +D ++S  +            R    GQ  
Sbjct: 62   IRSLAAFRLTGSTKDYAIVGSDSGRIVILDYDPKTSSFVKLHQETFGKSGARRIVPGQYL 121

Query: 122  IIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLD---IKFLYGCAKPT 176
              DP  R + +   +   L  ++  D    L  +  +   +   +    +    G   P 
Sbjct: 122  ATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKSSAIIHHIVGLDVGFENPL 181

Query: 177  IVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP- 223
               L  D  +A    T E A   +            + V   WS+   D  A+LL+ VP 
Sbjct: 182  FAALEVDYAEADQDPTGEAAQNAEKMLTYYELDLGLNHVVRKWSEPT-DPRANLLVQVPG 240

Query: 224  -----------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------ITKAYG 259
                       P   GVL+  E+ I+Y   +  +    IP R            I  A  
Sbjct: 241  GQVASSERFDGP--SGVLVCCEDHIIYRHMDKPQHRVPIPRRSHPLEDPKRGVIIVAAVM 298

Query: 260  RVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                    +LL    G L  + I H++++V  LKI+      +AS++  L +  +++ S 
Sbjct: 299  HKMKGAFFFLLQSEDGDLFKVTIDHDEDEVKSLKIKYFDTVPVASSLCILKSGFLFVASE 358

Query: 320  YGDSQLIKLNL------QPDAKGSYVE---VLERYV----------------------NL 348
            +G+  L +         +P+   +      + E ++                      +L
Sbjct: 359  FGNHYLYQFQKLGDDDDEPEFSSTSFPSFGMAESFIPLPHAHFRPRGLDNLALADEIESL 418

Query: 349  GPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR 406
             PI+D  V++ L      Q+ T  G     + R++R+G+ + E  S EL GI   +W+ +
Sbjct: 419  DPILDAKVMNILPNSDTPQIFTACGRGSRSTFRMLRHGLEVEESVSSELPGIPNAVWTTK 478

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             + DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV  
Sbjct: 479  RTEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHP 536

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKH 525
              +R V S  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E + 
Sbjct: 537  QGIRHVLSDRRV--NEWRVPQGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEYQD 594

Query: 526  AQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS 584
             + +   +  L +  + E    +   AVG   D +VRI SL   + +    L     P S
Sbjct: 595  WKAMGSTVLALSVGEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAPPS 653

Query: 585  VLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
             +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L   
Sbjct: 654  AICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVRV 713

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            + +    + A S R  + Y+    + ++ +  + + +   F++   P+ L       L I
Sbjct: 714  TVQKNPGILALSSRSWLNYTHQSLMHFTPLIFENLDYAWSFSAELSPEGLIGITGSVLRI 773

Query: 696  GTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICS---LKNQSCAEES--EMH---- 744
              I  +  KL   ++PL   PR+ + H      + I     + ++S AE+   EM     
Sbjct: 774  FQIPKLGMKLKQDAVPLSYTPRKFVSHPANQYLYLIQGDHRVMSESAAEKKLQEMRTKGQ 833

Query: 745  -------------FVR-------------LLDDQTFEFISTYPLDTFEYGCSILSCSF-S 777
                         F R             ++D      I T  LD  E   S+    F +
Sbjct: 834  KVDEEILQLPVEVFGRPKAPAGTWASAICIIDPIEARTIHTVELDNNESAFSVAVVPFAA 893

Query: 778  DDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 834
             D+ ++  VGTA    + P        R   F  E   L+L+ + ET     ++ AF G+
Sbjct: 894  RDNELHLVVGTAADTLLTPRSCRSGYLRTYRFTDEGRSLELLHKTETDDVPLAVMAFQGR 953

Query: 835  LLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
            L+A + + ++LY    K +LR    +   S          + + T+G  I+VGD+ +S+ 
Sbjct: 954  LIAGVGKSLRLYEIGKKKLLRKAENKSFASAI--------VTLNTQGSRIIVGDMQESVH 1005

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE- 946
               YK  E  +   A D    W++A+ ++D       +   N+F  R   + S+   D+ 
Sbjct: 1006 FAAYKAPENRLLIFADDMQPRWVTALTMVDYTTIAVGDRFGNVFINRLDMRVSDQVDDDP 1065

Query: 947  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
                   E+G+L       +++  +H+G+ +      SLV        G    +++  ++
Sbjct: 1066 TGAGILHEKGQLSGAPHKTKLLCHFHVGDLITSIHKVSLV-------AGGREVLLYTGIH 1118

Query: 993  GVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
            G IG++   +  E   F+  L+ ++R     + G +   WR +    K V     +DGDL
Sbjct: 1119 GTIGILVPFVSKEDVDFISTLEQHMRSEQSSLVGRDQLSWRGYYTPVKAV-----VDGDL 1173

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             E+F  L+ ++   I+  ++ +V E+ K++E+L
Sbjct: 1174 CEAFARLTGSKQSAIAGELDRTVGEVLKKLEQL 1206


>gi|367027320|ref|XP_003662944.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
            42464]
 gi|347010213|gb|AEO57699.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
            42464]
          Length = 1211

 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 296/1226 (24%), Positives = 521/1226 (42%), Gaps = 169/1226 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT +T + +G F+  +E  +IIA  +R+ +    P QG +  +L   ++
Sbjct: 6    NMFLYSLTIQPPTTITQALLGQFSGTREQQIIIASGSRLSLLQPDPRQGKVNTLLSHDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I  +  FR  G  +D++ +AT+  +  ++++  +++      +        R    GQ
Sbjct: 66   GIIRAIASFRLAGSHKDYIILATDSGRIAIIEYQPKTNRFSRIHLETFGKSGVRRVVPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  LI     + L  V+  + + +L  +  +   +  VL +  +    G A 
Sbjct: 126  YLAADPKGRACLIASIEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPV 222
            P    L  D  +A    T E A + +            + V   WS + +D  + LL  V
Sbjct: 186  PVFAALEIDYTEADQDPTGEAAKETEAQLVYYELDLGLNHVVRKWS-DVVDPTSSLLFQV 244

Query: 223  P-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGD 272
            P     P   GVL+ GEE I Y  +N  AF+  IP R   T+     R    G  + L  
Sbjct: 245  PGGNDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPQRKRTIVSGVMHKLKG 302

Query: 273  HAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVV 314
             AG    LV T + +                  +V  LKI+      IA ++  L +  +
Sbjct: 303  SAGAFFFLVQTEDGDLMKVTLDMVEDNDGNPTGEVRRLKIKYFDTIPIAKSLCILKSGFL 362

Query: 315  YIGSSYGDSQLIKL---------------NLQPDAKGSYVEV------LERYV------N 347
            +  S +G+    +                +   D + SY  V      LE  V      +
Sbjct: 363  FAASEFGNHHFYQFEKLGDDDDEQEFTSDDFPTDPRASYNPVYFRPRPLENLVLVESIDS 422

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG-MWSLR 406
            + P+VD  V +L  +   Q+    G     + R++++G+ ++E  + EL G    +W+ +
Sbjct: 423  MNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASELPGTPAAVWTTK 482

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             +  D +D ++V+SF + T +L++   + +EE    GF +   TL         L+QV  
Sbjct: 483  LTKYDEYDGYIVLSFTNATLVLSIG--ETVEEVTESGFLTSVPTLAVQQMGEEGLIQVHP 540

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-K 524
              +R +        NEW +P   S+  A  N +QV++A   G +VY E+  DG L E  +
Sbjct: 541  KGIRHIVQGRV---NEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDE 597

Query: 525  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 583
              ++   ++ L I  + E    S   AVG   D +VRI SL P+  L  K        P 
Sbjct: 598  KKEMSGTVTSLSIGKVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQALTSAPS 656

Query: 584  SVLLCAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            S+ + + E    G++ YL   L  G  L  +L+  TGELTD ++  LG +P  L   S +
Sbjct: 657  SLSIMSMEDSTGGMTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQ 716

Query: 639  NTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
            N   V A S RP + Y+    K  + + +N  E+ +   FNS    + +       L I 
Sbjct: 717  NQACVLALSSRPWLGYTDPITKNFVMTPLNYSELEYGWNFNSEQCLEGMVGIHANFLRIF 776

Query: 697  TIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICS--------LKNQSCAEESEMH-- 744
            TID + +  I +SIPL   P+R+  H EQ   + I S        L+ Q  A+   ++  
Sbjct: 777  TIDKLGETMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTIPPELRAQLLAQSGAVNGD 836

Query: 745  -----------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-SDDS 780
                                    V  L D+  + +    L+  E   S     F S + 
Sbjct: 837  ATVLPPEDFGYPRATGRWASCISIVDPLGDEP-KVLQRIDLEGNEAAVSAAVVPFASQEG 895

Query: 781  NVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLA 837
              +  VGT   ++    + T+G I V+   EDG+ L+ I + + +    +L  F G+LLA
Sbjct: 896  ESFLVVGTGKDMVLNPRKFTEGYIHVYRFHEDGRELEFIHKTKVEEPPLALIPFQGRLLA 955

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
             I + +++Y   LR    + L+   G     L + +QT+G  I+VGD+ + ++ ++YK E
Sbjct: 956  GIGKMLRVYDLGLR----QLLRKAQGEVAPQLIVTLQTQGSRIIVGDVQQGVTYVVYKPE 1011

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGRLEVVG 955
               +   A D    W +   ++D +   G +   N++ +R  + +   +DE    ++++ 
Sbjct: 1012 SNKLLVFADDTINRWTTCTTMVDYESVAGGDKFGNVWILRCPERASQESDEPGSEIQLL- 1070

Query: 956  EYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV-I 998
                     ++ HG+              LP S       VG    +++  + G +GV I
Sbjct: 1071 ------HARKYLHGAPNRLDLMVHFYTQDLPTSIVKTNLVVGGQDVLVWSGIQGTVGVLI 1124

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              +  E   F + L++++R     + G +H  +R +      V  K  +DGDL E F  L
Sbjct: 1125 PFVSREDVDFFQSLESHMRAEDPPLAGRDHLIYRGY-----YVPVKGVIDGDLCERFSLL 1179

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
               +   I+  ++ SV E+ +++ ++
Sbjct: 1180 PNDKKQMIAGELDRSVREIERKISDI 1205


>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
 gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
          Length = 1197

 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 299/1223 (24%), Positives = 493/1223 (40%), Gaps = 182/1223 (14%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIYGRIAT 64
            +T   PT V  +  GNF++PQ   L++A+   ++  LL P     L+ ++   ++G +  
Sbjct: 6    LTLQPPTGVHLAVYGNFSAPQAQELVVARGDVLQ--LLRPDESGRLEVVISTQVFGVVRA 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
            L+ FR  G  +D+L + ++  K  VL+ +  SS    R          R    GQ    D
Sbjct: 64   LQPFRLTGGDRDYLVVGSDSGKIVVLEVNPTSSRFEARQSETYGKTGCRRITPGQYLAAD 123

Query: 125  PDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAFNIRLEELQVLDIKFLYGCAKPTI 177
            P  R  LIG      L  V+  D   +L      EA       L V+ +    G   P  
Sbjct: 124  PKGRAVLIGAVEKQQLVYVMNRDASSRLTISSPLEAHRSNAIHLGVVGLDV--GFENPIF 181

Query: 178  VVLYQDNKDARH----------VKT---YEVALKDKDFVEGPWSQNNLDNGADLLIPVPP 224
              L  D  +A            VKT   YE+ L   + V   WS+  +   A+ L+ VP 
Sbjct: 182  ASLELDYAEADADPSGQAAREVVKTLVYYELDL-GLNHVTRRWSEQVV-RSANRLVAVPG 239

Query: 225  PLCG---VLIIGEETIVYCSANAFK---AIPIRPS------ITKAYGRVDADGSRYLLGD 272
               G   VL++GE T+ Y +    +   AIP R        I  A      D    LL  
Sbjct: 240  GGDGPGGVLVLGENTVQYKNEGHPELTCAIPRREGEHRDIIIVSAATHKQRDLFFVLLQS 299

Query: 273  HAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL---- 328
              G L+ + + +    V  +KI+      +AS++      +++  S + +  L +     
Sbjct: 300  ELGDLYKISLDYSGNVVEEIKIQFFDTIPVASSMCITKTGLLFCASEFSNHYLFQFLSIG 359

Query: 329  ---------NLQPDAKGSYVEVLERYVNLG---------PIVDFCVVDLERQGQGQVVTC 370
                     +L  D        L +  NL          P+    V DL  +   Q+   
Sbjct: 360  EGDDAAKCSSLAMDPTEFSTFPLRKLTNLALASSSASLSPVTQLLVDDLANEQTPQMYAL 419

Query: 371  SGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILA 429
             G     SLR++R+G+ I E A+  L G+ K +W L+ S  DP+D ++VVSF  E   L 
Sbjct: 420  CGNNNRSSLRVLRHGLPITEMAASALPGVAKAVWCLKESYADPYDKYIVVSF--EDATLV 477

Query: 430  MNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 489
            + + + +EE    GF     +L       +  +Q+ +  +R V     +   EWK+P   
Sbjct: 478  LEVGETVEEVAQSGFLRDHGSLLVALLEDDSKLQIHTNGIRHVPKF--QPVTEWKAPGKK 535

Query: 490  SVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINPIGENPSYSQ 548
             +    AN+ QV+++  GG ++Y E+G  G L E     L +E+  LD+  + E     Q
Sbjct: 536  VIEHCAANSRQVVISLAGGEIIYFELGQSGELAEKGKLDLGFEVCSLDLGEVPEGRQRFQ 595

Query: 549  IAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEG------------ISY 595
              AVG W D +VRI SL P+     K  L     P ++ L   +               +
Sbjct: 596  FMAVGSW-DNTVRILSLDPNELFRQKSTLALTSHPHTLCLAQLQNEPSTPDSEHSSQALF 654

Query: 596  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
            L   L +G L   L++  T  L D +   LGT P+ L   + +    + A S R  + Y 
Sbjct: 655  LSIGLDNGVLQQSLIDPITATLADSRSRFLGTNPVKLFRVAVEGKRSILALSSRAWISYF 714

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSL-AIAKEGELTIGTIDDI------QKLHIRS 708
               +   + ++ + +S+   FNS   P  + A+  EG + I T+D +      QK ++R 
Sbjct: 715  HQTRRHLTPLSCELLSYASSFNSEQCPGGIVALTNEG-MKILTVDQLGDTFNQQKCNLRY 773

Query: 709  IPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH------------------------ 744
             P     + + H    R   I S  N+  A     H                        
Sbjct: 774  TPR----KAVVHSPSRRLVVIESDHNEYGAAYKRQHGLQIPDIRSANDLEDEAEDEINDA 829

Query: 745  -----------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCV 786
                              VR++D  + + +    LD  E   SI +C F D     +  V
Sbjct: 830  LLFPRGPLPAEKDKWASCVRIIDPASCQTVVCEELDVDERARSIAACVFHDRGGEAFIIV 889

Query: 787  GTA--YVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            GT     L  +  P  G + V+ +VE  +L L+   E     +++  F G+LL ++ + +
Sbjct: 890  GTVKKMQLHPQKAPAGGYLRVYRVVEGMQLVLVHTTEIDDIPHAMCEFQGRLLVSVGRAL 949

Query: 844  QLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            ++Y    K MLR    R   S        + + ++  GD I   D+ +S   + YK +E 
Sbjct: 950  RIYDLGKKKMLRKCENRNFPS--------ILVELKAAGDRIYASDMHESFHFVKYKKDEN 1001

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE-----------------G 942
             +   A D    ++++  +LD D   GA+   N+F  R  SE                 G
Sbjct: 1002 QLVIFADDCVPRFITSSVLLDYDTLCGADKFGNVFVSRLPSEVSDEIDNPTGNRILWDSG 1061

Query: 943  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASL 1001
              +    +LE V ++H+G+ V      SLV        G    VI+ T+ G IG +I   
Sbjct: 1062 LLNGAPNKLEQVAQFHVGDVVTSMVRSSLVP-------GGTEAVIYATIMGRIGALIPFT 1114

Query: 1002 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
              E   F   L+  +R+    + G +H  +RS+      +  KN  DGDL E F  LS  
Sbjct: 1115 SREDVDFYTHLEMYMRQEQPPLCGRDHLSYRSY-----YIPVKNITDGDLCEQFSSLSVE 1169

Query: 1062 RMDEISKTMNVSVEELCKRVEEL 1084
            +   +++ ++ +  E+ K++E++
Sbjct: 1170 KQASVAEDLDRTPAEVLKKLEDI 1192


>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1201

 Score =  239 bits (611), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 284/1240 (22%), Positives = 523/1240 (42%), Gaps = 202/1240 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIY 59
            ++ Y +T    T +  +  GNFT  +   +++A+   ++  LL P     LQ ML V I+
Sbjct: 1    MYLYSLTLQSATGIVCATYGNFTGGKTQEIVVARGKVLD--LLRPDDNGKLQTMLSVEIF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I              ++ + ++  +  +L+++ E + L  +   +   + G R    G
Sbjct: 59   GAI-------------HYIVVGSDSGRIVILEYNKEKN-LFEKVHQETFGKSGCRRIVPG 104

Query: 119  QIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R + +   +   L  V+  DN  +L  +  +   +   +         G  
Sbjct: 105  QYLAVDPKGRAVMISACEKQKLVYVLNRDNAARLTISSPLEAHKSHTIVYSITGVDCGFD 164

Query: 174  KPTIVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    +  D             N+  +H+  YE+ L     V   W++  +DNGA++L+
Sbjct: 165  NPIFAAIELDYSEADQDPTGQAANEAQKHLTFYELDLGLNHVVR-KWTEP-IDNGANMLV 222

Query: 221  PVP---PPLCGVLIIGEETIVYCSAN---AFKAIPIRPSITKAYGRVDADGSR------- 267
             VP       GVL+  E  ++Y + N       IP R  +    G +    +        
Sbjct: 223  TVPGGGDGPSGVLVCAENFVIYKNQNHPDIRAVIPRRQDLPPNRGVLIVSAATHKQKALF 282

Query: 268  -YLLGDHAGLLHLLVITHEKE-KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
             +LL    G +  + + ++K+ +VT LK++      + S +  L +  ++  S +G+  L
Sbjct: 283  FFLLQTEYGDIFKVTLDYDKDDQVTELKVKYFDTIPVTSAMCVLKSGFLFAASEFGNHSL 342

Query: 326  IKLNLQPD------AKGSYVEVLERYV-------------------NLGPIVDFCVVDLE 360
             +     D      +  + VE  E Y                    +L PI+D  V ++ 
Sbjct: 343  YQFQSIGDDPEVESSSSTLVETEEGYQPVFFQPRKLKNLVQIDDIESLMPIMDMKVANIF 402

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVV 419
             +   Q+ +  G     SLRI+R G+ + E A   L G+   +W+++   +D FD ++VV
Sbjct: 403  EEETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTVKKHANDEFDAYIVV 462

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T +L       + L+QV    +R + S  R  
Sbjct: 463  SFVNATLVLSIG--ETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIRSDGR-- 518

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDIN 538
             NEWK+P   ++     N  QV++A  GG L+Y E+   G L E++   +  +++CLDI 
Sbjct: 519  INEWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIEKRDMTGDVACLDIA 578

Query: 539  PIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS- 594
            P+ E    S+  AVG + D ++RI SL PD  + +++ + +     P S+LL   +  + 
Sbjct: 579  PVPEGRQRSRFLAVGSY-DSTIRILSLDPDDCMQILSVQAVSSP--PESLLLLEVQASTG 635

Query: 595  -----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
                       +L   L +G LL   ++M TG+L+D +   LG +   L +   +    +
Sbjct: 636  GEDGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSALVRGRRAM 695

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-Q 702
               S RP + Y      L + ++ + + +   F+S    + +       L + TI+ + +
Sbjct: 696  LCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGE 755

Query: 703  KLHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMH----------------- 744
              +   +PL   PR+ I H +Q     + S +     EE E +                 
Sbjct: 756  TFNQTVVPLRYTPRKFILHPKQKTLIILESDEGAFSTEEREANKKEAVEATGGHENGKAD 815

Query: 745  --------------------------------FVRLLDDQTFEFISTYPLDTFEYGCSIL 772
                                             +R+LD +T        L   E   SI 
Sbjct: 816  GEDEEMADEESEDPLPDEQYGYPKAEANKWVSCIRVLDPKTSTTTCLLELQENEAAFSIC 875

Query: 773  SCSFSDDSNV--YYCVGTAYVLP--EENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 826
            + +F D+  +     VGTA  L      E + G I ++   E+G+ L+L+ +    G   
Sbjct: 876  TVNFHDNKELGTLIAVGTAKDLQFMPRKEASGGFIHIYRFAEEGRVLELVHKTPVDGVPT 935

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH---ILALYVQTRGDFIVVG 883
            +L  F G+LL  + Q +++Y     D G R+L  +C +      I+A++  T GD I VG
Sbjct: 936  ALCQFQGRLLVGVGQVLRIY-----DLGKRKLLRKCENKNFPNTIIAIH--TYGDRIYVG 988

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE-- 941
            D+ +S   + Y+ +E  +   A D    W++A   +D D   GA+   N++ +R   +  
Sbjct: 989  DIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADKFGNVYVMRLPQDVS 1048

Query: 942  ---------GATDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
                     G    E+GRL       + + ++H+GE V   +  SL+        G   +
Sbjct: 1049 EEIEDDPTGGKIKWEQGRLNGAPNKVDEIIQFHVGEVVTSLQKASLI-------PGGGES 1101

Query: 986  VIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 1044
            +++GTV G +G +      E   F   L+ +LR+    + G +H  +RS          K
Sbjct: 1102 MLYGTVMGSMGALLPFSSREDVDFFSHLEMHLRQENPPLCGRDHMAFRS-----AYFPVK 1156

Query: 1045 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            + +DGDL E +  L+     +I+  ++ +  E+ K++E++
Sbjct: 1157 DVIDGDLCEQYSMLTSELQKKIADDLDRTPGEIVKKLEDI 1196


>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
          Length = 1219

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 296/1229 (24%), Positives = 515/1229 (41%), Gaps = 171/1229 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  +I     + L  V+  +++ +L  +  +   + Q L         G   
Sbjct: 126  YLAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALDVGYEN 185

Query: 175  PTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  ++             +H+  YE+ L     V   WS + +D  A LL  
Sbjct: 186  PVFAALEVDYSESDQDPTGQAFDELEKHLVYYELDLGLNHVVRK-WS-DPVDRTASLLFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRP----------SITKAYGRVDADG 265
            VP       GVL+  E+++ Y  +N  AF+  IP R           SIT          
Sbjct: 244  VPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGATENPERKRSITAGVMHKMRGA 303

Query: 266  SRYLLGDHAGLLHLLVITHEKE---KVTG----LKIELLGETSIASTISYLDNAVVYIGS 318
              +LL    G L  L I   ++   ++TG    LKI+      +AS++  L +  +Y+ S
Sbjct: 304  FFFLLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVAS 363

Query: 319  SYGDSQLIKLNLQPD--------------------------AKGSY-VEVLERYVNLGPI 351
              G+    +     D                           +G+  + ++E   +L P+
Sbjct: 364  EAGNHHFYQFEKLGDDDEEIEFTSESFSADPSVPCDPIYFRPRGAENLNLVETINSLNPL 423

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
            +D  VV++      Q+ T SGA    S R +++G+ ++E    EL  +   +W+ + +  
Sbjct: 424  IDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRS 483

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D FD ++++SF + T +L++   + +EE    GF S   TL       + L+Q+    +R
Sbjct: 484  DEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIR 541

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQL 528
             + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q+
Sbjct: 542  HILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQM 599

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ +
Sbjct: 600  SGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSALNI 658

Query: 588  CAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
             +    S      YL   L  G  L  +L+  TGEL+D +   LG++P+ L   S K  T
Sbjct: 659  MSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQT 718

Query: 642  HVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
             V   S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+
Sbjct: 719  AVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIE 778

Query: 700  DI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR----------L 748
             +   +  +SIPL   PRR     +   F +    N   A  +    +           +
Sbjct: 779  KLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLAPSTRAKLLEDSKSRGGDETV 838

Query: 749  LDDQTFEF----------------------ISTYPLDTFEYGCSILSCSF-SDDSNVYYC 785
            L  + F +                      + T  L+  E   SI +  F S D   +  
Sbjct: 839  LPPEDFGYPRATGHWASCIQVVDPLDAKAVVHTIELEENEAAISIAAVPFTSQDDETFLV 898

Query: 786  VGTAYVLPEENEP--TKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
            VGTA  +   N P    G I ++   EDG+ L+ I + + +    +L  F G+L+A I  
Sbjct: 899  VGTAKDM-TVNPPGSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLALLGFQGRLVAGIGS 957

Query: 842  KIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
             +++Y     D G ++L  +C        I+ L  QT+G  IVV D+ +S++ ++YK++E
Sbjct: 958  LLRIY-----DLGMKQLLRKCQAPVVPKTIVGL--QTQGSRIVVSDVRESVTYVVYKYQE 1010

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------E 947
              +     D  + W +A  ++D +   G +   NL+ +R   K SE A ++        E
Sbjct: 1011 NVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEEADEDGSGAHLIHE 1070

Query: 948  RG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
            RG       RLE++   +  +         LV        G    +++    G IG++  
Sbjct: 1071 RGYLQGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILVWTGFQGTIGMLVP 1123

Query: 1001 -LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  L 
Sbjct: 1124 FIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEMYFLLP 1178

Query: 1060 RTRMDEISKTMNVSVEELCKRVEELTRLH 1088
                  I+  ++ SV E+ +++  + RLH
Sbjct: 1179 NDTKMMIAAELDRSVREIERKISCIYRLH 1207


>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
          Length = 1209

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 286/1226 (23%), Positives = 510/1226 (41%), Gaps = 174/1226 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T   PT +T + VGNF+  +   +I+++ TR+E+    P    +  +L   ++G I 
Sbjct: 4    YNLTLQPPTAITQAIVGNFSGVRAQEIIVSRGTRLELLKPDPNTGKVSTVLTHDVFGTIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G A+D+  + ++  +  +L++D +++   T+   +   + G R    GQ   
Sbjct: 64   SLVAFRLTGGAKDYAIVGSDSGRLVILEYDPQANAF-TKLHQETYGKSGVRRIVPGQYLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKF---LY 170
            +DP  R + +   +   L  ++  D    L  +  +        +  +  +D+ F   L+
Sbjct: 123  VDPKGRSVMIAALEKAKLVYILNRDAAANLTISSPLEAHKNHGIIHSIVGVDVGFENPLF 182

Query: 171  GCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP- 223
               +       QD+    + KT      YE+ L     V   WS+   D  A+LL+ VP 
Sbjct: 183  AALEVDYTESDQDSTGEAYEKTEKMLTYYELDLGLNHVVRK-WSEPT-DKRANLLLQVPG 240

Query: 224  -----------PPLCGVLIIGEETIVYCSANAFK-AIPI-----------RPSITKAYGR 260
                       P   GVLI  E  I++   +  +  +PI           R SI  A   
Sbjct: 241  GQTSSEARHDGP--SGVLICCEGYIIWRHMDTVQHRVPIPKRRHPLDERTRDSIIVAAVM 298

Query: 261  VDADGSRY-LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                G+ + LL    G L  + I HE E+V  +KI+      +AS++  L +  +++ S 
Sbjct: 299  HKMKGAFFFLLQSEDGDLFKVTIDHEDEEVKTMKIKYFDTVPVASSLCILKSGFLFVASE 358

Query: 320  YGDSQLIKLNLQPD-------AKGSYVE--------------------VLERYVN-LGPI 351
            +G+  L +     D       +  SY +                    VL   +N   PI
Sbjct: 359  FGNHYLYQFQKLGDDDDEIEYSSVSYPDNGMADPIPQAYFRPRPLENLVLADELNSFDPI 418

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
            VD  V +L      Q+    G     S R++R+G+ + E  S EL GI   +W+++   D
Sbjct: 419  VDAKVTNLLNTDTPQIFAACGRGARSSFRMLRHGLDVEETVSSELPGIPNAVWTVKLKAD 478

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D +D ++++SF++ T +L++   + +EE    GF S + T+       + L+QV    +R
Sbjct: 479  DQYDAYIILSFVNGTLVLSIG--ETIEEVSDTGFLSSSPTIAVQQIGEDSLLQVYPHGIR 536

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK-HAQL 528
             V S  R   NEW+ P   ++  AT N+ QV +A     LVY E+  +G L E +    L
Sbjct: 537  HVLSDRRV--NEWRCPQHTTIVAATTNSRQVAIALSSAQLVYFELDLEGQLNEYQDRKSL 594

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               +  + I  + E    +   AVG   D +VRI SL PD  L           P S+ +
Sbjct: 595  GSGVLAMSIAEVPEGRQRTPYLAVGC-EDQTVRIISLDPDTTLENISLQALTAPPSSICV 653

Query: 588  CAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                  S        ++   L +G LL  +L+   G+LTD +   LG++P+ L   +   
Sbjct: 654  AEIMDASIDKNQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGSRPVRLIRVNVHG 713

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               + A S R  + Y+    L ++ +    + +   F++   PD L       L I  + 
Sbjct: 714  LPSILALSSRSWLNYTYQNLLHFTPLIFDPLEYAWSFSAELCPDGLIGISGNVLRIFQVP 773

Query: 700  DI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE---------------- 742
            ++ QKL    IPL   PR++      R F +    ++  + E+                 
Sbjct: 774  NLGQKLKQDVIPLSYTPRKMLQHPTERLFYVIESDHRVLSPEAADKKLQKLKSTGQRLDQ 833

Query: 743  --------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-SDDSN 781
                                   ++++D      +   PLD  E   S+   +F +    
Sbjct: 834  EVIDLPADIFGRPRADAGTWASCIQIIDPANVRSVLEVPLDNNEAAFSLAITTFIARPGE 893

Query: 782  VYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
            ++  VGTA  V+        G +  + I EDG+ L+ + + E      +L +F G+L+A 
Sbjct: 894  LFLVVGTAQDVIVSPKSCKSGFLRTYKISEDGRSLEFLHKTEVDDVPLALLSFQGRLVAG 953

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHE 897
            I + ++++     D G + L  +C +     A+  + T+G  I+VGD+ +SI    YK  
Sbjct: 954  IGKALRIF-----DMGKKRLLRKCENKSFATAIVTLSTQGSRIIVGDMAESIYFATYKPP 1008

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG----- 949
            E  +   A D    W++A  ++D D     +   N+F  R   K  E   ++  G     
Sbjct: 1009 ENRLLIFADDSQPRWITASAMVDYDTVCAGDKFGNVFVNRLPPKVGEQVDEDPTGAGVLH 1068

Query: 950  ----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-I 998
                      +  ++  Y++G+ +      +LV        G    V++  ++G IGV I
Sbjct: 1069 EKGLFMGAPHKTNMLAHYYVGDIITSMHKVALV-------TGGRDIVLYTGLHGTIGVLI 1121

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              +  E   F+  L+ ++R     + G +H  +R +      V  K  +DGDL E F  L
Sbjct: 1122 PFISKEDVDFIRTLEQHMRTEAPSLVGRDHLTYRGY-----YVPVKGVVDGDLCELFSLL 1176

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
               +   I+  ++ +  E+ K++E+L
Sbjct: 1177 PTQKQQSIAGELDRTYSEVLKKLEQL 1202


>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
          Length = 1212

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 299/1223 (24%), Positives = 519/1223 (42%), Gaps = 170/1223 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T   P NV  + +G F   +E  +I    +++ +    P    +  +L   ++G I 
Sbjct: 10   YSLTVQPPNNVVQAVLGQFAGTKEQLIITGAGSQLTLLRPDPSLGKVTTVLSHNVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D+L IA++  +  V+++    +      +        R    G+    
Sbjct: 70   SLAAFRLAGSNKDYLIIASDSGRITVVEYLPAQNRFSRLHLETFGKSGVRRVIPGEYLAC 129

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  LI     + L  V+    + +L  +  +   +  VL I  +    G A P   
Sbjct: 130  DPKGRACLIASTEKNKLVYVLNRSAQAELTISSPLEAHKPGVLVISMVALDVGYANPVFA 189

Query: 179  VLYQD----NKDA-----RHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIPVP-- 223
             L  D    ++D+       V+T    YE+ L     V   WS+  +D  A LL  VP  
Sbjct: 190  ALEMDYSEVDQDSSGQALEEVETQLVYYELDLGLNHVVRK-WSEP-VDPTASLLFQVPGG 247

Query: 224  ---PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHAG 275
               P   GVL+ GEE+I Y  +N  AF+  IP R   T+  +  R    G  + L   AG
Sbjct: 248  NDGP--SGVLVCGEESITYRHSNQDAFRVPIPRRKGATEDPSRKRTIVSGVMHKLKGSAG 305

Query: 276  LLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIG 317
                L+ T + +                  +V  LKI+      +A+++  L +  +YI 
Sbjct: 306  AFFFLLQTEDGDLFKVTIDMVEDEEGSPTGEVKRLKIKYFDTVPVATSLCILKSGFLYIA 365

Query: 318  SSYGD---SQLIKL------------NLQPDAKGSY------------VEVLERYVNLGP 350
            S +G+    Q  KL            +   D + SY            + ++E   ++ P
Sbjct: 366  SQFGNFSFYQFEKLGDDDAELEFSSDDFPVDPQASYDPVYFHPRPAENLALVESIPSMNP 425

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  V +L  +   Q+ T  G     + R++R+G+ +NE  + EL GI   +W+L+ + 
Sbjct: 426  LLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVASELPGIPSAVWTLKLNR 485

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
             + +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV    +
Sbjct: 486  GEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFSTSVPTLAAQLLGDDGLIQVHPKGI 543

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQL 528
            R + +      NEW +P   S+  A+ NA QV +A   G +VY E+  DG L E    + 
Sbjct: 544  RHIRNGKV---NEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDEKKE 600

Query: 529  EY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
             +  ++CL +  + E    S   AVG   D +VRI SL P+  L +K        P S+ 
Sbjct: 601  MFGTVTCLSLGEVPEGRVRSSFLAVGC-DDCTVRILSLDPESTLESKSVQALTAAPSSLA 659

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + A +  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   + + T
Sbjct: 660  IIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGT 719

Query: 641  THVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            T V   S RP + YS    K  + + +N  ++     F+S    + +   +   L I +I
Sbjct: 720  TCVLGLSSRPWLGYSDPITKGFVVTPLNYVDLEWGWNFSSEQCEEGVVGIQGQSLRIFSI 779

Query: 699  DDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICS--------LKNQSCAEESEMHF-VR 747
            D +   L  +++ L   P++ I H EQ   + I S        L+ Q  A+ + ++    
Sbjct: 780  DRLGDTLTQKAVSLTYTPKKLIKHPEQPLFYTIESDNNTLPPDLRAQLMADPAVVNGDAT 839

Query: 748  LLDDQTF-----------------------EFISTYPLDTFEYGCSILSCSF-SDDSNVY 783
            +L  + F                       + + T  L+  E   S     F S D+  +
Sbjct: 840  VLPPEDFGYPKGNRRWASCINVIDPVSEEPQVVQTVDLENNEAAVSAAIVPFASQDNESF 899

Query: 784  YCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
              VGT     V P         +  F  E  +L+ I + + +    +L  F GKLLA + 
Sbjct: 900  LIVGTGKDVVVNPRNFSEAYIYVYRFQEEGRELEFIHKTKIEEPALALIPFQGKLLAGVG 959

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            + +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++ + YK     
Sbjct: 960  KTLRVYDLGMR-QMLRKAQAEVAPQ-QIVSL--NTQGSRIIVGDIQQGVTYVTYKPTTNK 1015

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG-------- 949
            +   A D  A W +   ++D +   G +   N+F VR   K SE A +E+ G        
Sbjct: 1016 LIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPPKASEEADEEQSGLHLMNARD 1075

Query: 950  -------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASL 1001
                   RL+++  ++  +        SLV       VG    +++  + G IGV I  +
Sbjct: 1076 YLHGTSQRLDLMCHFYTQDIPTSMAKTSLV-------VGGQDVLLWSGLMGTIGVFIPLI 1128

Query: 1002 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
              E   F + L+++LR     + G +H  +RS+         K  +DGDL E +  L   
Sbjct: 1129 SREDADFFQSLESHLRTEDPPLAGRDHLMYRSY-----YAPVKGIIDGDLCERYTLLPND 1183

Query: 1062 RMDEISKTMNVSVEELCKRVEEL 1084
            +   I+  ++ SV E+ +++ ++
Sbjct: 1184 KKQMIAGELDRSVREIERKISDI 1206


>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
          Length = 1208

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 290/1225 (23%), Positives = 504/1225 (41%), Gaps = 174/1225 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNVT + +G F   +E  +I    +  ++ LL P   Q     +L   ++G 
Sbjct: 10   YSLTVQPPTNVTQAVLGQFAGTREQLIITGAGS--QLSLLRPDPSQGKVITLLSHDVFGI 67

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+L IA++  +  ++++    +      +        R    G+  
Sbjct: 68   IRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFQRLHLETFGKSGVRRVIPGEYL 127

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  LI     + L  V+  +++ +L  +  +   +  VL I  +    G + P 
Sbjct: 128  ACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNPV 187

Query: 177  IVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  D  +     T             YE+ L     V   WS + +D  A +L  VP
Sbjct: 188  FAALEIDYSEVDQDSTGQAMEELDTQLVYYELDLGLNHVVRK-WS-DPVDPTASILFQVP 245

Query: 224  -----PPLCGVLIIGEETIVYCSAN--AFK-AIPIRPSITK--AYGRVDADGSRYLLGDH 273
                 P   GVL+ GEE I Y  +N  AF+ AIP R   T+     R    G  + L  +
Sbjct: 246  GGNDGP--SGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGN 303

Query: 274  AGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVY 315
             G    L+ T + +                  +V  LK++      +AS++  L +  +Y
Sbjct: 304  TGAFFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSGFLY 363

Query: 316  IGSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNL 348
            + + +G+    +                +   D K SY            + ++E    +
Sbjct: 364  VATQFGNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESIPAM 423

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  V +L  +   Q+ T  G     S R++++G+ +NE  + EL GI   +W+L+ 
Sbjct: 424  NPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKL 483

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  + +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV   
Sbjct: 484  NRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPK 541

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA 526
             +R + + +    NEW +P   S+  ATANA QV +A   G +VY E+  DG L E    
Sbjct: 542  GIRHIRNGNV---NEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEK 598

Query: 527  QLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K        P S
Sbjct: 599  KEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQALTAAPTS 657

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   + +
Sbjct: 658  LAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQ 717

Query: 639  NTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              T V   S RP + Y+    K  + + +N  ++     F+S    + +   +   L I 
Sbjct: 718  GKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIF 777

Query: 697  TIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV--------- 746
             ID + +  I +SIPL   P+++        F      N +   E     +         
Sbjct: 778  NIDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLADPGVVNGD 837

Query: 747  -RLLDDQTF-----------------------EFISTYPLDTFEYGCSILSCSFSD-DSN 781
             R+L  + F                       + + T  L+  E   S     FS  D+ 
Sbjct: 838  SRVLPPEDFGYPKGTRRWASCINVIDPLSEEGQVLQTIDLENNEAAVSAAIVPFSSQDNE 897

Query: 782  VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
             +  +GT     V P         I  F+    +L+ I + + +    +L AF G++L A
Sbjct: 898  SFLVIGTGKDMVVNPRSFSEGYLHIYRFLEGGRELEFIHKTKVEEPPLALLAFQGRVLVA 957

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            +   +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++ ++YK   
Sbjct: 958  VGTSLRIYDLGMR-QMLRKSQAEVATQ-QIVSL--NTQGSRIIVGDVQQGVTYVVYKPAS 1013

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------ 949
              +     D  A W +   ++D +   G +   N+F VR   K SE A +E+ G      
Sbjct: 1014 NKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQSGLHLINA 1073

Query: 950  ---------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IA 999
                     R+ ++  ++  +        SLV       VG    +++  + G IGV I 
Sbjct: 1074 RDYLHGTPHRVSLMCHFYTQDIPTSITKASLV-------VGGQEVLLWSGIMGTIGVFIP 1126

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  E   F + L+ +LR     + G +H  +R +         K  +DGDL E +  L 
Sbjct: 1127 FVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGY-----YAPVKGVIDGDLCERYNLLP 1181

Query: 1060 RTRMDEISKTMNVSVEELCKRVEEL 1084
              +   I+  ++ SV E+ +++  L
Sbjct: 1182 NDKKQMIAGELDRSVREIERKISYL 1206


>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
            phaseolina MS6]
          Length = 1210

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 284/1236 (22%), Positives = 506/1236 (40%), Gaps = 183/1236 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIY 59
            +++ Y +T   PT V  + +G F   +E  +I A  +R+ +H    Q   + P+L   ++
Sbjct: 6    NLFMYSLTIQPPTAVHQAILGQFAGTKEQQIITASGSRLVLHRADAQAQRISPVLTHHVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I  L  FR  G ++D++ +A++  +  +L+++ + +      +        R    GQ
Sbjct: 66   GVIRALAAFRLAGSSKDYIIVASDSGRIAILEYNPQKNIFTQLKLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  +I     + L  V+  D+   L  +  +     Q      +    G   
Sbjct: 126  YLATDPKGRACMIASIEKNKLVYVLNRDSNANLTISSPLEAHRPQTFVFSLIGLDVGYEN 185

Query: 175  PTIVVLYQDNKDARHVKTYEVAL-KDKDFVE-----------GPWSQNNLDNGADLLIPV 222
            P    L  D  D     T EVA  K K+ V              WS + +D  A++L  V
Sbjct: 186  PIFAALEVDYDDVDQDHTGEVAASKQKELVYYELDLGLNHVVRKWS-DAVDRTANMLFQV 244

Query: 223  P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVD-ADGSRYLLGDHAGL 276
            P     P   GVL+ GEE+I Y   N     P R  I +  G  +     RY+    AG+
Sbjct: 245  PGGQDGP--SGVLVCGEESITYRHINQ---DPFRVPIPRRKGATENPQRKRYIT---AGV 296

Query: 277  LHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYLDN 311
            +H +                     ++  E+ + TG    LKI+      +AS++  L +
Sbjct: 297  MHKMRGAFFFLLQTEDGDLFKVTIDMVEDEQGQPTGDVSRLKIKYFDTVPVASSLCILKS 356

Query: 312  AVVYIGSSYGDS---------------QLIKLNLQPDAKGSY------------VEVLER 344
              +++ +  G+                + I  N  P+    Y            + + + 
Sbjct: 357  GYLFVTAESGNHHFYQFEKLGDDDEELEFISDNFSPEPDAPYEPVFFHPRGAENISLAQS 416

Query: 345  YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMW 403
              ++ P +   V +L      Q+ T  G     + + + +G+ ++E    EL  + + +W
Sbjct: 417  VPSMNPTLGCKVANLTDDDAPQIYTVCGTGARSTFKTLTHGLEVSEIVESELPSVPEAVW 476

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            + +  T D +D ++++SF + T +L++   + +EE    GF S T+TL       + L+Q
Sbjct: 477  TTKIRTGDEYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSTRTLAVQLLGEDALIQ 534

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 522
            V    +R + +  R   NEW +P   ++  AT N  QV +A   G +VY E+  DG L E
Sbjct: 535  VHPKGIRHIQAGGR--INEWPAPQHRTIVAATTNERQVAVALSSGEIVYFEMDVDGSLAE 592

Query: 523  V-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
              +  ++   ++CL +  + E    S   AVG   D +VRI SL PD  L  K       
Sbjct: 593  YDEKKEMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTS 651

Query: 581  IPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             P ++ + A    S      YL   L  G  L  +++  TGELTD +   LG + + L  
Sbjct: 652  APSALSIMAMADSSSGGSTLYLHIGLYSGVYLRTVIDEITGELTDTRTRFLGAKGVKLFR 711

Query: 635  FSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
             + ++ + + A S R  + YS    K    + +    +     FNS      +   +   
Sbjct: 712  VTVQDQSAILATSSRSWLGYSDQQTKAFTLTPLAYAPLEWGWSFNSEQCTQGMVGIQGQH 771

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV----- 746
            L I TI+++   L   +IPL   PR +        F +    N   A  +    +     
Sbjct: 772  LRIFTIENLSNNLLFENIPLMYTPRNLVRHPTEPLFYVIESDNGVLASSTRQQLLNDPAA 831

Query: 747  -----RLLDDQTF----------------------EFISTYPLDTFEYGCSILSCSF-SD 778
                 ++L  + F                      E + T  L+  E   S+    F S 
Sbjct: 832  VNGDAKILPPEEFGYPRAEGHWASCIQVVDPISSKEVVHTLELEENESAVSVCLAPFTSQ 891

Query: 779  DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNG 833
            +   +  VGTA    V P       G + ++ + E+G+ L+ I + + +    +L  F G
Sbjct: 892  NDETFLVVGTAKDLVVAPRSY--NCGYVHIYRLQENGRELEFIHKTKMEAPPMALLPFQG 949

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISL 891
            KLL  +   ++LY     D G R+L  +      +  + + +QT+G  IV  D+ +S++ 
Sbjct: 950  KLLVGVEADLRLY-----DLGLRQLLRKAQALNVVPNILIGLQTQGSRIVCSDVQESVTY 1004

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 948
            ++YKH E  + +   D    W S   ++D +   G +   N++ VR   K SE A +E  
Sbjct: 1005 VVYKHLENRLIQFCDDSIHRWTSCTAMVDYETTAGGDKFGNIWLVRCPPKASEEADEEGS 1064

Query: 949  G---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
            G               RL+++  ++  +     +  +LV        G    +++  + G
Sbjct: 1065 GLHLINERPYLQGTPNRLDLLAHFYTQDIPTSIQKTALV-------AGGRELLLWSGLQG 1117

Query: 994  VIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +G+ I  +  E   F + L+  LR     + G +H  +RS+      V  K  +DGDL 
Sbjct: 1118 TLGIFIPFVSREDVDFFQSLEQQLRTEDPPIAGRDHLAYRSY-----YVPVKGVIDGDLC 1172

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRV-EELTRL 1087
            E FL L R + + I+  ++ SV E+ +++ ++ TR 
Sbjct: 1173 ERFLRLPRDKKETIAAELDRSVREVERKIGDQRTRF 1208


>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
          Length = 1189

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 293/1214 (24%), Positives = 505/1214 (41%), Gaps = 175/1214 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNVT + +G F   +E  +I A  +  ++ LL P   Q     +L   ++G 
Sbjct: 10   YSLTVQPPTNVTQAVLGQFAGTREQLIITAAGS--QLSLLRPDPSQGKVITLLSHDVFGI 67

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+L IA++  +  ++++    +      +        R    G+  
Sbjct: 68   IRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFHRLHLETFGKSGVRRVIPGEYL 127

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  LI     + L  V+  +++ +L  +  +   +  VL I  +    G + P 
Sbjct: 128  ACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNPV 187

Query: 177  IVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  D  +     T             YE+ L     V   WS + +D  A +L  VP
Sbjct: 188  FAALEIDYSEIDQDSTGQAMEELDTQLVYYELDLGLNHVVR-KWS-DPVDPTASILFQVP 245

Query: 224  -----PPLCGVLIIGEETIVYCSAN--AFK-AIPIRPSITK--AYGRVDADGSRYLLGDH 273
                 P   GVL+ GEE I Y  +N  AF+ AIP R   T+     R    G  + L   
Sbjct: 246  GGNDGP--SGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGS 303

Query: 274  AGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVY 315
            AG    L+ T + +                  +V  LKI+      +AS++  L +  +Y
Sbjct: 304  AGAFFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKIKYFDTVPVASSLCILKSGFLY 363

Query: 316  IGSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNL 348
            + S +G+    +                +   D + SY            + ++E    +
Sbjct: 364  VASQFGNYSFYQFEKLGDDDEELEFYSDDFPADPRASYEPVYFHPRPTENLALVESIPAM 423

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  V +L  +   Q+ T  G     S R++++G+ +NE  + EL GI   +W+L+ 
Sbjct: 424  NPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKL 483

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  + +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV   
Sbjct: 484  NRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPK 541

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA 526
             +R V +      NEW +P   S+  ATANA QV +A   G +VY E+  DG L E    
Sbjct: 542  GIRHVRNGHV---NEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEK 598

Query: 527  QLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K        P S
Sbjct: 599  KEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQALTAAPTS 657

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + + A +  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   + +
Sbjct: 658  LAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEVRLFQVTVQ 717

Query: 639  NTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              T V   S RP + Y+    K  + + +N  ++     F+S    + +   +   L I 
Sbjct: 718  GKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIF 777

Query: 697  TIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV--------- 746
             ID +    I +SIPL   P+++        F      N +   E     +         
Sbjct: 778  NIDRLGDTLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLADPKIVNGD 837

Query: 747  -RLLDDQTF-----------------------EFISTYPLDTFEYGCSILSCSFSD-DSN 781
             R+L  + F                       + + T  L+  E   S    SFS  D+ 
Sbjct: 838  SRVLPPEDFGYPKGTRRWASCINVIDPLSEEGQVVQTIDLENNEAAVSAAIVSFSSQDNE 897

Query: 782  VYYCVGTAY-VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
             +  VGT   ++      ++G + ++  +DG           G   +L AF G++  A+ 
Sbjct: 898  SFLVVGTGKDMVVNPRSYSEGYLHIYRFQDG-----------GENLTLLAFQGRVAVAVG 946

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
             ++++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++ ++YK     
Sbjct: 947  TQLRIYDLGMR-QMLRKSQAEVAAQ-QIVSL--NTQGSRIIVGDVQQGVTYVVYKPASNK 1002

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEY 957
            +     D  A W +   ++D +   G +   N+F VR   K SE A DEE+  L ++   
Sbjct: 1003 LIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEA-DEEQTGLHLIN-- 1059

Query: 958  HLGEFVNRFRHGSLVMRLPDS------DVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLE 1010
                    + HG+    +P S       VG    +++  + G IGV I  +  E   F +
Sbjct: 1060 -----AREYLHGTPHRDIPTSITKTSLVVGGQEILLWSGIMGTIGVFIPFISREDADFFQ 1114

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             L+ +LR     + G +H  +R +         K  +DGDL E +  L   +   I+  +
Sbjct: 1115 NLEQHLRTEDPPLAGRDHLMYRGY-----YAPVKGVIDGDLCERYNLLPNDKKLMIAGEL 1169

Query: 1071 NVSVEELCKRVEEL 1084
            + SV E+ +++ ++
Sbjct: 1170 DRSVREIERKISDI 1183


>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
          Length = 1212

 Score =  236 bits (602), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 295/1226 (24%), Positives = 521/1226 (42%), Gaps = 176/1226 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNV  + +G F   +E  +I    +++ I  L P   Q    P+L   I+G 
Sbjct: 10   YSLTIQPPTNVVQAVLGQFAGTKEQLIITGSGSQLTI--LRPDPAQGKVIPLLSHDIFGV 67

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            + ++ +FR  G ++D++ +AT+  +  VL++   S    +R   +   + G R    G+ 
Sbjct: 68   LRSIAVFRLAGSSKDYIILATDSGRITVLEY-LPSPNRFSRLHMETFGKTGIRRVVPGEY 126

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
               DP  R  LI     + L  V+  +++ +L  +  +   +  VL I       G A P
Sbjct: 127  LACDPKGRACLISAVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVIALTALDVGYANP 186

Query: 176  TIVVLY-------QDNKDA------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
                L        QDN          H+  YE+ L     V   WS + +D  A LL  V
Sbjct: 187  VFAALEIDYTEVDQDNTGEALSEVETHLVYYELDLGLNHVVRK-WS-DPVDPTASLLFQV 244

Query: 223  P-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGD 272
            P     P   GVL+ GEE + Y  +N  A +  IP R   T+  +  R    G  + L  
Sbjct: 245  PGGNDGP--SGVLVCGEENVTYRHSNQDALRVPIPRRRGATEDPSRKRNIVAGVMHKLKG 302

Query: 273  HAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVV 314
             AG    L+ T + +                  +V  +KI+      +A+++  L +  +
Sbjct: 303  SAGAFFFLLQTDDGDLFKITIDMVEDEEGAPTGEVQRMKIKYFDTVPVATSLCILKSGFL 362

Query: 315  YIGSSYGDS---QLIKL------------NLQPDAKGSY------------VEVLERYVN 347
            Y+ S +G+    Q  KL            +   D   +Y            + +++    
Sbjct: 363  YVASQFGNYAFYQFEKLGDDDDELEFSSDDFPVDPLAAYEPVYFYPRPAENLALVDSIPA 422

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR 406
            + P++D  V +L  +   Q+ +  G     + R +++G+ +NE  + EL G+   +W+L+
Sbjct: 423  MNPLLDCKVANLTGEDAPQIYSICGNGARSTFRTIKHGLEVNEIVASELPGVPSAVWTLK 482

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             ++D+ +DT++V+SF + T +L++   + +EE    GF +   T+       + L+QV  
Sbjct: 483  LNSDEQYDTYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHP 540

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKH 525
              +R + + +    NEW +P   S+  A+ NA QV +A   G +VY E+  DG L E   
Sbjct: 541  RGIRHIRNGNV---NEWSAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDE 597

Query: 526  AQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 583
             +  +  ++ L +  + E    S   AVG   D +VRI SL P+  L  K        P 
Sbjct: 598  KKEMFGTVTALSLGEVPEGRVRSSFLAVGC-DDATVRILSLDPESTLENKSVQALTAAPT 656

Query: 584  SVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
            S+ +   +  S      YL   L  G  L  +L+  TG+L+D ++  LG +P+ L   S 
Sbjct: 657  SLAIIPMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGDLSDTRQKFLGPKPVRLFQVSV 716

Query: 638  KNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
               T V   S RP + Y+         + +N  ++     F+S    D +   +   L I
Sbjct: 717  GGRTCVLGLSSRPWLGYADPITNSFEITPLNYVDLEWGWNFSSEQCEDGVVGIQGQSLRI 776

Query: 696  GTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV-------- 746
             +ID + +  I+ SIPL   P++         F      N +   + +   +        
Sbjct: 777  FSIDRLGETLIQSSIPLTYTPKKFVKHPSEPLFYTIEADNHTLPPDLQAKLLADPAAVNG 836

Query: 747  --RLLDDQTF----------------EFISTYP-------LDTFEYGCSILSCSF-SDDS 780
              ++L  + F                + +S  P        +  E   S    SF S D+
Sbjct: 837  DAKVLPPEEFGHPRGNRRWASCISVVDPVSEEPSVLQKVDFENNEAAVSAAVVSFASQDN 896

Query: 781  NVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLA 837
              +  VGT   ++      ++  I ++  ++G  +L+ I + + +    +L AF GKLLA
Sbjct: 897  ESFLVVGTGKDMILNPRSSSEAYIYIYRFQEGGRELEFIHKTKIEEPAMALLAFQGKLLA 956

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
             I + +++Y   +R    R+ Q+E      I++L   T+G  IVVGD+ + ++L++YK  
Sbjct: 957  GIGKTLRMYDLGMR-QLLRKAQAEVVPQ-QIVSL--NTQGSRIVVGDVQQGVTLVVYKPA 1012

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG----- 949
               +   A D  A W +   ++D +   G +   N+F VR   K SE A +E+ G     
Sbjct: 1013 SNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRSPAKASEEADEEQAGLHLVN 1072

Query: 950  ----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-I 998
                      RLE++  +   +        SLV       VG    +++  + G IGV I
Sbjct: 1073 ARDYLHGAQHRLELMCHFFTQDVPTSINKTSLV-------VGGQDVLLWSGIMGTIGVFI 1125

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              +  E   F + L+ +LR     + G +H  +RS+    K V     +DGDL E F  L
Sbjct: 1126 PFVSREDADFFQSLEQHLRTEDAPLAGRDHLMYRSYYAPVKGV-----IDGDLCERFAAL 1180

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
               +   ++  ++ SV E+ +++ ++
Sbjct: 1181 PNDKKQMMAGELDRSVREIERKISDI 1206


>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
 gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
          Length = 1209

 Score =  236 bits (602), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 303/1226 (24%), Positives = 519/1226 (42%), Gaps = 173/1226 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT VT + +G F   ++  ++ +  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAVTQAVLGQFAGTRDQQIVTSSGSKLTIHRPDPAQGKITPLYSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRVAGSNKDYIIIGSDSGRITIVEY-VPSQNRFNRIHMETFGKSGVRRVVPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L    +    G   
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMICLDVGYDN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  ++    T             YE+ L     V   WS + +D  A +L  
Sbjct: 186  PVFAALEVDYSESDQDPTGQAYEEIEKVLVYYELDLGLNHVVRK-WS-DTVDRTASMLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSR------ 267
            VP     P   GVL+ GE+ I Y  +N  AF+  IP R   T+   R  +  S       
Sbjct: 244  VPGGDDGP--SGVLVCGEDNITYRHSNQGAFRVPIPRRSGATENPERKRSIVSGVMHKMR 301

Query: 268  ----YLLGDHAG---LLHLLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYI 316
                +LL    G    L+L ++  ++ + TG    L I+      +++ +  L +  +Y 
Sbjct: 302  GAFFFLLQTEDGDLFKLNLEMVEDKQGQPTGEVKRLTIKYFDTIPVSTNLLILKSGFLYA 361

Query: 317  GSSYGDS---QLIKLNLQPD-----------------------AKGSY-VEVLERYVNLG 349
             S  G+    Q  KL   PD                        +G+  V ++E   +L 
Sbjct: 362  ASESGNHNFYQFEKLGDDPDELFFSSDSFSADHSVPSAPVFFHPRGAENVNLMESMNSLS 421

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  +++L      Q+ T  G+    S R +++G+ ++E    +LQ +   +W+ + +
Sbjct: 422  PLIDSKILNLSEDDAPQIYTICGSGARSSFRTLKHGLEVSEIVESDLQQVPSAVWTTKLT 481

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
              D F T++++SF + T +L++   + +EE    GF S   TL       + LVQV    
Sbjct: 482  RADEFHTYIILSFANGTLVLSIG--EIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRG 539

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHA 526
            +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  
Sbjct: 540  IRHILADQRV--NEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERR 597

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
            Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P ++
Sbjct: 598  QMSGTVTSLSMGEVPEGRMRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + A    S      YL   L  G  L  +L+  TGEL+D +   +G +P+ L   S K 
Sbjct: 657  QIMAMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSVKG 716

Query: 640  TTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V A S RP + YS    K  + + ++   +     F+S    + +   +   L I T
Sbjct: 717  QTAVLALSTRPWLGYSDIQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMIGIQGRSLRIFT 776

Query: 698  IDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQ---- 752
            ++ +    ++ SIPL   PRR         F +    N   +  +     RL+DD     
Sbjct: 777  VEKLDNNMLQESIPLSYTPRRFVKHPDQHLFYVIESDNNVLSPATRQ---RLIDDSQAQN 833

Query: 753  -------------------------------TFEFISTYPLDTFEYGCSILSCSFSD-DS 780
                                           T   IST  L+  E   S+ + SFS  D 
Sbjct: 834  GEVADLPPADFGYPRATGHWASCVQIVDPITTKSVISTLDLEDNEAAVSLAAVSFSSQDD 893

Query: 781  NVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
              +  VGTA    V P  +  + G I ++   EDG+ L+ I + +      +L  F G+L
Sbjct: 894  ETFLVVGTAKDMTVSPPSS--SCGFIHIYRFQEDGRELEFIHKTQVDEPPLALLGFQGRL 951

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLL 892
            LA I   +++Y     D G ++L  +C        I+ L  QT+G  I+V D+ +S++ +
Sbjct: 952  LAGIGPVLRVY-----DLGMKQLLRKCQAPVVPKTIVGL--QTQGSRIIVSDIRESVTYV 1004

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--- 946
            +YK+++  +   A D  A W S+  ++D +   G +   NL+ VR   K SE A ++   
Sbjct: 1005 VYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNLWLVRCPSKISEQADEDGSG 1064

Query: 947  -----ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGV-I 998
                 E+G L   G  H  E +  F    +   L  + +  G    V++  + G IG+ +
Sbjct: 1065 AHLIHEKGYLH--GTPHRLELMVHFFAQDIPTSLHKTQLVAGGRDIVVWTGLQGTIGMFV 1122

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              +  E   F + L+T L      + G +H  +R +    K V     +DGDL E +L L
Sbjct: 1123 PFVSREDVDFFQLLETQLASQQPPLAGRDHLMYRGYYAPVKGV-----IDGDLCEMYLLL 1177

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
                   I+  ++ SV E+ +++ ++
Sbjct: 1178 PNDTKLMIAGELDRSVREIERKISDM 1203


>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1308

 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 276/1199 (23%), Positives = 507/1199 (42%), Gaps = 140/1199 (11%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  +PT +T + +G F+  +   +++A  +R+ +    P    +  +L   ++G I 
Sbjct: 124  YSLTIQQPTVITQAILGQFSGQKLQEIVVASGSRLSLLRPDPNVGKVNTILTHDVFGIIR 183

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             L  FR  G  +D++ I ++  +  +L++    ++     +        R    GQ    
Sbjct: 184  CLAAFRLAGSGKDYIIIGSDSGRITILEYIPTQNKFKRLHLETFGKSGVRRVVPGQYLAC 243

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  LI     + L  V+  + + +L  +  +   +   L         G   P   
Sbjct: 244  DPRGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPHCLVFALCALDVGYENPIFA 303

Query: 179  VLYQDNKDARHVKT---YEVALKDKDFVE---------GPWSQNNLDNGADLLIPVP--- 223
            VL  D  +     T   Y  A K   + E           WS+  ++  ++ L+ VP   
Sbjct: 304  VLEMDYSETDQDPTGEAYREAEKSLTYYELDLGLNHVVRKWSEP-VERSSNFLLHVPGGS 362

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRV-DADGSRY------------ 268
              P   GVL+  E+ + Y   N  +   +R  I +  G   D +  R+            
Sbjct: 363  DGP--SGVLVCSEDAVTYRHMNQPE---LRVPIPRRRGACEDPNRKRFITCGVMHKMRGA 417

Query: 269  ---LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
               LL    G L  + +  ++  V  L+I+      IA+++  L +  +++ S  G+   
Sbjct: 418  FFFLLQSEDGDLFKVGLDFDENSVVRLRIKYFDTVPIATSLCILKSGFLFVASENGNHHF 477

Query: 326  IKLNLQPD------------AKGSY--------VEVLERYVNLGPIVDFCVVDLERQGQG 365
             +     D               +Y        + ++E   ++  ++D  + +L      
Sbjct: 478  YQFEKLGDDDNETEFTSDDEINAAYFSPRLAENLALMESVDSMNSLLDCQIANLTNDDAP 537

Query: 366  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISE 424
            Q+ T  GA    S R +++G+ ++E  S EL G    +W+ + ++ D +D ++V+SF + 
Sbjct: 538  QIYTICGANARSSFRTLKHGLEVSEIVSSELPGGPVAVWTTKLASQDEYDAYIVLSFTNG 597

Query: 425  TRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
            T +L++   + +EE    GF S   TL       + L+QV    +R + +  R   NEW 
Sbjct: 598  TLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDGLLQVHPKGIRHIRADRRV--NEWP 653

Query: 485  SPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVK-HAQLEYEISCLDINPIGE 542
            +P   S+  A+ N+ QV +A   G +VY E+  DG L E +   ++   ++CL +  + E
Sbjct: 654  APQHRSIVAASTNSRQVAIALSSGEIVYFELDSDGQLAEYEDKKEMSGTVTCLSLGDVPE 713

Query: 543  NPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------- 594
                S   AVG   D +VRI SL PD  L +K        P ++ + +    +       
Sbjct: 714  GKMRSSFLAVGC-DDSTVRILSLDPDSTLESKSVQALTSAPTALRIMSMPDSAGGDSQRS 772

Query: 595  --YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
              +L   L  G  L  +L+  TGELTD +   LG QP+ L + S+  TT + A S +P +
Sbjct: 773  TLFLHIGLYSGVYLRTVLDTITGELTDTRTRFLGPQPVKLFSVSAAGTTAILALSSKPWL 832

Query: 653  IYSSNK-KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIP 710
             Y++   + L + ++ + +++ C F+S   P+ +   +   L I T++ I + L   SIP
Sbjct: 833  GYTNGSGQYLLTPLSYQSLTYGCTFSSEQCPEGMVGIQGNNLRIFTVEKISENLQQESIP 892

Query: 711  LGEHPRRICHQEQSRTFAICSLKNQSCAEES--------------------------EMH 744
            L   PR++     +  F + S    + + ES                          E H
Sbjct: 893  LSYTPRKMAKHPTAPYFYVVSSDADTLSPESRNNLIAKAQNGDSTELPPSEFGYPRCEGH 952

Query: 745  F---VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAY-VLPEENEPT 799
            +   V ++D    E      L   E   SI    FS  D   +  VGTA  ++      +
Sbjct: 953  WASCVEVVDPINKEVTHKIDLGENEAALSIAVVPFSSQDDEHFLVVGTAKDLVLNPRSSS 1012

Query: 800  KGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRE 857
             G   V+ + DG   +Q I + + + A  +  AF+G+LLA I Q +++Y   ++    R+
Sbjct: 1013 CGYAHVYRLSDGGKTIQFIHKTKLEYAPLAFAAFHGRLLAGIGQDLRIYDLGMKQ-LLRK 1071

Query: 858  LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
             Q+    +   L   + T+ + I+V D+ +S++ ++YK +E  +   A D    W +   
Sbjct: 1072 TQATVAPN---LITGLTTQNNRIIVSDIQESVTYVVYKQQENKLIPFADDMVPRWTTCTA 1128

Query: 918  ILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS--LV 972
            +LD +   G +   NL+ VR   K SE A ++      +  + +L    NR    S    
Sbjct: 1129 LLDYESVAGGDKFGNLWVVRAPPKASEEADEDPSSGYLLHEKSYLQGAPNRVNLMSHFFT 1188

Query: 973  MRLPDS------DVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGG 1025
              +P S        G    V++  + G IG++   +  E   F + L+ ++R     + G
Sbjct: 1189 QDVPTSIQKVNLVAGGRDCVVWSGLQGTIGIMVPFISREDVDFFQTLEQHMRTEDAPLAG 1248

Query: 1026 LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +H  +RS+      V  K  +DGDL E F  L   +   I+  ++ S+ E+ ++V ++
Sbjct: 1249 RDHLIYRSY-----YVPVKGVIDGDLCERFALLPYDKKQMIAAELDRSIREVERKVADM 1302


>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
          Length = 1212

 Score =  236 bits (601), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 288/1225 (23%), Positives = 505/1225 (41%), Gaps = 174/1225 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNVT + +G F   +E  +I    +  ++ LL P   Q     +L   ++G 
Sbjct: 10   YSLTVQPPTNVTQAVLGQFAGTREQLIITGAGS--QLSLLRPDPSQGKVITLLSHDVFGI 67

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G  +D+L IA++  +  ++++    +      +        R    G+  
Sbjct: 68   IRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFQRLHLETFGKSGVRRVIPGEYL 127

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  LI     + L  V+  +++ +L  +  +   +  VL I  +    G + P 
Sbjct: 128  ACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGYSNPV 187

Query: 177  IVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  D  +     T             YE+ L     V   WS + +D  A +L  VP
Sbjct: 188  FAALEIDYSEVDQDSTGQAMEELDTQLVYYELDLGLNHVVRK-WS-DPVDPTASILFQVP 245

Query: 224  -----PPLCGVLIIGEETIVYCSAN--AFK-AIPIRPSITK--AYGRVDADGSRYLLGDH 273
                 P   GVL+ GEE I Y  +N   F+ AIP R   T+     R    G  + L  +
Sbjct: 246  GGNDGP--SGVLVCGEENITYRHSNQETFRVAIPRRRGATEDPNRKRTIVSGIMHKLKGN 303

Query: 274  AGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVY 315
             G    L+ T + +                  +V  LK++      +AS++  L +  +Y
Sbjct: 304  TGAFFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKVKYFDTVPVASSLCILKSGFLY 363

Query: 316  IGSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNL 348
            + + +G+    +                +   D K SY            + ++E    +
Sbjct: 364  VATQFGNYSFYQFEKLGDDDEELEFYSDDFPADPKASYEPVYFHPRPTENLALVESIPAM 423

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  V +L  +   Q+ T  G     S R++++G+ +NE  + EL GI   +W+L+ 
Sbjct: 424  NPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWTLKL 483

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  + +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV   
Sbjct: 484  NRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPK 541

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA 526
             +R + + +    NEW +P   S+  ATANA QV +A   G +VY E+  DG L E    
Sbjct: 542  GIRHIRNGNV---NEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEK 598

Query: 527  QLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K        P S
Sbjct: 599  KEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQALTAAPTS 657

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   + +
Sbjct: 658  LAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQ 717

Query: 639  NTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              T V   S RP + Y+    K  + + +N  ++     F+S    + +   +   L I 
Sbjct: 718  GKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIF 777

Query: 697  TIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV--------- 746
             ID + +  I +SIPL   P+++        F      N +   E     +         
Sbjct: 778  NIDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLADPGVVNGD 837

Query: 747  -RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSCSFSD-DSN 781
             ++L  + F +                       + T  L+  E   S    SFS  D+ 
Sbjct: 838  SKVLPPEDFGYPKGTRRWASCINVIDPLSEEGQVLQTIDLENNEAAVSAAIVSFSSQDNE 897

Query: 782  VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
             +  +GT     V P         I  F+    +L+ I + + +    +L AF G++L A
Sbjct: 898  SFLVIGTGKDMVVNPRSFSEGYLHIYRFLEGGRELEFIHKTKVEEPPLALLAFQGRVLVA 957

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            +   +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++ ++YK   
Sbjct: 958  VGTSLRIYDLGMR-QMLRKSQAEVATQ-QIVSL--NTQGSRIIVGDVQQGVTYVVYKPAS 1013

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------ 949
              +     D  A W +   ++D +   G +   N+F VR   K SE A +E+ G      
Sbjct: 1014 NKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQSGLHLINA 1073

Query: 950  ---------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IA 999
                     R+ ++  ++  +        SLV       VG    +++  + G IGV I 
Sbjct: 1074 RDYLHGTPHRVSLMCHFYTQDIPTSITKASLV-------VGGQEVLLWSGIMGTIGVFIP 1126

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  E   F + L+ +LR     + G +H  +R +         K  +DGDL E +  L 
Sbjct: 1127 FVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGY-----YAPVKGVIDGDLCERYNLLP 1181

Query: 1060 RTRMDEISKTMNVSVEELCKRVEEL 1084
              +   I+  ++ SV E+ +++ ++
Sbjct: 1182 NDKKQMIAGELDRSVREIERKISDI 1206


>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
 gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
          Length = 1199

 Score =  236 bits (601), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 279/1223 (22%), Positives = 501/1223 (40%), Gaps = 170/1223 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIY 59
            ++ Y +T  K   V  +  GNF++P+   +++++   +E  LL P     +Q ++   ++
Sbjct: 1    MFLYNLTLQKGGGVQCAVYGNFSAPKAQEIVVSRNKVLE--LLRPDESGKMQTIVSTEVF 58

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I +L  FR  G  +D+L   ++  +  VLQ+D E +               R    GQ
Sbjct: 59   GVIRSLAAFRLTGANRDYLVCGSDSGRIVVLQYDKERNRFDKVHQETFGKSGCRRIVPGQ 118

Query: 120  IGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY---GCAK 174
               +DP  R I +   +   L  V+  D +  L  +  +   +  V+         G   
Sbjct: 119  FLCVDPKGRAIMIAAIEKAKLVYVLNRDTEANLTISSPLEANKSHVVAFHVAALDCGLDN 178

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKD---FVE--------GPWSQNNLDNGADLLIPVP 223
            P    +  D  DA    T E A + +    F E           S   +DNGA+ LI VP
Sbjct: 179  PVFAAIELDYADADQDSTGEAAAEAQKHLTFYELDLGLNHVARKSSEPIDNGANHLIAVP 238

Query: 224  PPLCG---VLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR--------YL 269
                G   VL+  E  I+Y +    +    IP R +++   G +    +         +L
Sbjct: 239  GGGDGPGGVLVCAENFIIYKNQGHPDVRAVIPRRNALSGDRGVLIVSSATHRTKQQFFFL 298

Query: 270  LGDHAGLLHLLVITHEK--EKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
                 G ++ + + ++K  E V+ +KI+         +I  L    ++  S +G+  L +
Sbjct: 299  AQSEYGDIYKVTVEYQKGTEFVSEVKIKYFDTIPPCVSICVLKTGFLFAASEFGNHALYQ 358

Query: 328  LNLQPD-------AKGSYVEVLERYV-------------------NLGPIVDFCVVDLER 361
                 D       +  + VE  E Y                    +L P++D    +L  
Sbjct: 359  FQGIGDDEDDVESSSATLVETDEGYQPVFFEPRALRNLHPIDDVESLCPVLDMQCHNLVA 418

Query: 362  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVS 420
            +   Q+    G     +LR++R G+ ++E A   L G    ++++R S  D FD ++VVS
Sbjct: 419  EETPQLYALCGTGPRSTLRVLRQGVALSEMAVSPLPGNPNAVFTVRKSASDEFDAYIVVS 478

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
            F + T +L++   + +EE    GF     TL       + L+QV  G +R + +  R   
Sbjct: 479  FTNATLVLSIG--ETVEEVSDSGFLGTVPTLSASLLGDDSLLQVHPGGLRHIRADKR--I 534

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINP 539
            NEW++P   +V   T NA QV++A  GG L+Y E+   G L EV+  +   +++CLDI P
Sbjct: 535  NEWRTPGRKTVTRVTTNARQVIIALSGGELIYFELDQTGQLMEVEKLETSGDVACLDIGP 594

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII---PRSVLLCAFEGIS-- 594
            + E    ++  AVG + D +VRI SL   + +  + +G + +   P S+L+   +G    
Sbjct: 595  VPEGHLRNRFLAVGSF-DSTVRILSLGAEDCL--QTMGVQALAAAPNSLLMLRDDGSGSI 651

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV-I 653
            YL   L +G LL   ++  TG+L+D +   LG +P  L   S +    + A S RP +  
Sbjct: 652  YLNVGLTNGVLLRADVDSVTGQLSDTRARFLGARPPKLSAVSVQGKAAMMALSSRPWLGH 711

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLG 712
            +    +   S ++ + + H  PF+S A P+ +       L I  ++ + ++ + R+  L 
Sbjct: 712  FDLANRFALSPLSYEPLEHAAPFSSDACPEGVVAVAGNTLRIVAVERLGEQFNQRTCKLR 771

Query: 713  EHPRRICHQEQSRTFAICSLKNQSC----------------------------------- 737
              PR++       T A+      S                                    
Sbjct: 772  YTPRQMSVNVDRNTLAVVECDQSSVPYDERTGLEGAAGEKDTKMDVEGEEDDEEEDEVTM 831

Query: 738  --AEE---------SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCV 786
              AE+         S    VR++D  +        +   E         F     ++  V
Sbjct: 832  TPAEQFGAPKAPPGSWASCVRIVDPASASTKQIVEMTGNEAALCCCHVYFPQADELFLAV 891

Query: 787  GTAYVLPEENEPTKGRI--LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            G+A  L      ++G    L    +DG ++L  +    G   ++  F G+LL  +   ++
Sbjct: 892  GSAVSLTFSPRDSEGGFIHLYRYTQDGGIELFHKTPLDGVPGAMCGFKGRLLVGVGNTLR 951

Query: 845  LY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
            LY    K +LR    R   +            +  +G+ I VGD+ +S   + YK E+G+
Sbjct: 952  LYDFGKKKLLRKVENRNFPN--------FIKTIHAQGERIYVGDVQESFHYVRYKREDGS 1003

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEG 942
            +   A D     ++A   LD D   G +   N+F  R                     +G
Sbjct: 1004 MYIVADDVQPRHVTAACPLDYDTIAGGDRFGNVFVSRLAQDVSDEIEEDPTGGKTAYGQG 1063

Query: 943  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP 1002
            A +    ++  V ++H+GE V     G+L         G + ++I+ T+ G +G +    
Sbjct: 1064 ALNGASHKINQVTQFHVGETVCALTKGTL-------QAGGLESMIYATLMGTLGALMPFG 1116

Query: 1003 H-EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
            + E   F   L+ ++R+ +  + G +H  +RS          K+ +DGDL E +  L   
Sbjct: 1117 NREDVDFCTHLEMHMRQELPPLLGRDHLAFRS-----SYFPVKDVIDGDLCEMYTVLPHE 1171

Query: 1062 RMDEISKTMNVSVEELCKRVEEL 1084
                +++ M+ +V E+ K++E+L
Sbjct: 1172 AQRRVAEDMDRTVSEVLKKLEDL 1194


>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
          Length = 1215

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 278/1236 (22%), Positives = 527/1236 (42%), Gaps = 189/1236 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T +TH+  GNF+  ++  +I+++   +E+    P    +  +L   ++G I 
Sbjct: 4    YNLTLQRATGITHAAHGNFSGTKQQEIIVSRGKVLELLRPDPNTGKVHTLLTSEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G ++D++ + ++  +  +L++ A S  +  +   +   + G R    GQ   
Sbjct: 64   SLMPFRLTGGSKDYIILGSDSGRIVILEYVA-SKNIFEKIQQETYGKSGCRRIVPGQQLA 122

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            IDP  R  ++G      L  ++  D + +L  +  +   +   L    +    G   PT 
Sbjct: 123  IDPRGRAVMVGAVEKQKLVYILNRDAQARLTISSPLEAHKANTLGYYMVGVDVGFENPTF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A    T E A K +    + E     N+        L+  A++LI VP   
Sbjct: 183  ACLEVDYEEADSDPTGESASKLQQMLTYYELDLGLNHVVRKYSEPLEEHANMLISVPGGS 242

Query: 224  PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------------- 267
                GVLI  E  I Y   N      IR  I +    +D D  R                
Sbjct: 243  EGPSGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCNATHKTKSMF 299

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             +L     G +  + +  +++ VT ++++      +AS++  L    ++I S +G+  L 
Sbjct: 300  FFLTQTEQGDVFKITLETDEDMVTEVRLKYFDTVPVASSMCVLKTGFLFIASEFGNHYLY 359

Query: 327  KL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDLERQG 363
            ++             +  P  +G       R +          +L PI+   + DL  + 
Sbjct: 360  QIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVMVDEMDSLSPIMHCQIADLANED 419

Query: 364  QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFI 422
              Q+    G     +LR++R+G+ ++E A  EL G    +W+++ + +D FD +++VSF+
Sbjct: 420  TPQLFAMCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRNIEDEFDAYIIVSFV 479

Query: 423  SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
            + T +L++   + +EE    GF   T TL C     + LVQ+    +R + S  R   NE
Sbjct: 480  NATLVLSIG--ETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRSDKR--VNE 535

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPI 540
            WK+P   ++     N  QV++A  GG LVY E+   G L E  +  +L  ++ C+ +  +
Sbjct: 536  WKTPGKKTIVRCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKELSSDVVCMGLGRV 595

Query: 541  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLC------AFEGI 593
                   +  AVG+  D +VRI SL   + ++   L  + +P S   LC      A EG 
Sbjct: 596  PSGEQRCRFLAVGL-NDNTVRIISLDPTDCLSP--LSMQALPASPESLCIVEMGGAVEGQ 652

Query: 594  S--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
                     +L   L +G LL  +L+  TG+L+D +   LG++P+ L   S + +  V A
Sbjct: 653  EEAHINHGLFLNIGLQNGVLLRAVLDNVTGDLSDTRTRYLGSRPVKLFRISMQGSDSVLA 712

Query: 646  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 705
             S R  + Y+   +   + ++   + +   F S   P+ +       L I  ++ +  + 
Sbjct: 713  MSSRSWLSYTYQNRFHLTPLSYDTLEYASGFASEQCPEGIVAISTNTLRILALEKLGAIF 772

Query: 706  IR-SIPLGEHPRR-ICHQEQSRTFAICSLKN-----------QSCAEE------------ 740
             + SIPL   PR+ + H E      I S  N           Q  AEE            
Sbjct: 773  NQVSIPLQYTPRKFVIHAETGNVIVIESDHNAYTEDTKQQRKQQMAEEMVEAAGEEEQQL 832

Query: 741  -SEMHF-------------------------VRLLDDQTFEFISTYPLDTFEYGCSILSC 774
             +EM                           +++++    + +   PL+  E   S+   
Sbjct: 833  AAEMAAAFLQENLPEDVFGAPKAGNGMWASQIQIMNPINGKTLCKLPLEQNEAAFSVSIV 892

Query: 775  SFSDDSN-VYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNA 830
             F++  +  +  VGT   ++      + G IL F   +    L+L+          ++ A
Sbjct: 893  RFANHGDEAFVLVGTVKDLVLSPRSCSCGYILCFRFTNNYEGLELLHRTPVDDVPAAIAA 952

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMK 887
            F G++L  + + +++Y     D G +++  +C +      + A++V   G+ I+V D+  
Sbjct: 953  FQGRVLIGVGRHLRIY-----DLGKKKMLRKCENKFLPNFVTAIHVN--GNRIMVSDIQD 1005

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE- 946
            S   + YK  E  +   A D    W++   +LD +   GA+   N+  VR  S  ATD+ 
Sbjct: 1006 SFHFVRYKRHENQLIVFADDTCPRWLTCSCMLDYNTMAGADKFGNICVVRLPS-NATDDV 1064

Query: 947  -----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
                       +RG L       + +  +H+GE +   +  +L+        G   ++++
Sbjct: 1065 DEDPTGNKALWDRGSLNGASQKADSIANFHVGEMITSLQKATLI-------PGGSESLVY 1117

Query: 989  GTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
             T++G +G++     HE + F + L+ ++R  ++ + G +H  +RS+         +N +
Sbjct: 1118 TTLSGSLGMLVPFSSHEDHDFFQHLEMHMRSEVQSLCGRDHLAYRSY-----YFPVRNVI 1172

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
            DGDL E F  +  +R  +IS+ ++ +  E+ K++E+
Sbjct: 1173 DGDLCEMFTSMDVSRQKQISEELDRTPAEVSKKLED 1208


>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
 gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
 gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus Af293]
          Length = 1225

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 288/1224 (23%), Positives = 507/1224 (41%), Gaps = 173/1224 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++
Sbjct: 6    NMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I TL  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRTLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  +++ +L  +  +   + Q +         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  +A    T             YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRK-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       GVL+  E+ I Y  +N  AF+  IP R   T+   R  +  +  +     
Sbjct: 243  QVPGGADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKMRG 302

Query: 275  GLLHLL-------------VITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
                LL             ++  +  ++TG    LKI+      IAS++  L +  +Y+ 
Sbjct: 303  AFFFLLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLYVA 362

Query: 318  SSYGDSQLIKLN----------------------------LQPDAKGSYVEVLERYVNLG 349
            S  G+    +                               QP      + ++E   +L 
Sbjct: 363  SEAGNHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFQPRG-AENLNLVETLNSLN 421

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  +V+L      Q+ T SG+    S R +++G+ ++E    EL  +   +W+ + +
Sbjct: 422  PLIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLT 481

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
              D FD ++++SF + T +L++   + +EE    GF S   TL       + L+QV    
Sbjct: 482  RADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRG 539

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHA 526
            +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  
Sbjct: 540  IRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERR 597

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
            Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++
Sbjct: 598  QMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + +    S      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S K 
Sbjct: 657  NIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKG 716

Query: 640  TTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +
Sbjct: 717  QTAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFS 776

Query: 698  IDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR--------- 747
            I+ +   +   SIPL   PRR+    +   F +    N   +  +    +          
Sbjct: 777  IEKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDSKARNGET 836

Query: 748  -LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSFSD-DSNVY 783
             +L  + F +                      IST  L+  E   S+ +  FS  D   +
Sbjct: 837  NVLPPEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAAVPFSSQDDETF 896

Query: 784  YCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAI 839
              VGTA  +   N P+     + I    EDGK L+ I + + +    +L  F G+LLA I
Sbjct: 897  LVVGTAKDM-IVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAGI 955

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMKSISLLIYKH 896
               +++Y     D G ++L  +C     +++  +   QT+G  IVV D+ +S++ ++YK+
Sbjct: 956  GSTLRIY-----DLGMKQLLRKC--QAQVVSKTIVGLQTQGSRIVVSDVRESVTYVVYKY 1008

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE------- 946
            ++  +     D  + W ++  ++D +   G +   NL+ VR   K SE A ++       
Sbjct: 1009 QDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEEADEDGSGAHLI 1068

Query: 947  -ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
             ERG       RL+++   +  +         LV        G    +++    G IG++
Sbjct: 1069 HERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQLV-------AGGRDILVWTGFQGTIGML 1121

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
               +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  
Sbjct: 1122 VPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEMYFL 1176

Query: 1058 LSRTRMDEISKTMNVSVEELCKRV 1081
            L       I+  ++ SV E+ +++
Sbjct: 1177 LPNDTKMMIAAELDRSVREIERKI 1200


>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
          Length = 1202

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 284/1226 (23%), Positives = 508/1226 (41%), Gaps = 173/1226 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGR 61
            ++ Y +T  +   +T +  GNF++P++  ++I+    +E+      G +Q +  +  +G 
Sbjct: 1    MFLYALTLQRSGAITCTAYGNFSAPKQHEIVISHGKTLELIRPDQNGKIQSICQMECFGL 60

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I ++  FR  G  +D+L +  +  +  VL++  E ++     +        R    GQ  
Sbjct: 61   IRSMASFRLPGSNKDYLVLGADSGRISVLEFSKERNQFERVHLETYGKSGCRRIVPGQFL 120

Query: 122  IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-----YGCAKPT 176
              DP  R + +   +    V  F+     K   +  LE  +   I F       G   P 
Sbjct: 121  ASDPKGRAVMISAIEKQKLVYVFNRDASSKLTISSPLEAHKASTIHFSIVGVDVGFDNPI 180

Query: 177  IVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  D  DA   +T             YE+ L     V    +   +D  +++LIPVP
Sbjct: 181  FAALEMDYSDADADETGQSAEEFNKVLTFYELDLGLNHVVRK--ASEPIDAASNMLIPVP 238

Query: 224  PPL---CGVLIIGEETIVYCSAN---AFKAIPIR-------PSITKAYGRV-DADGSRYL 269
                   GVL+  E  I Y   +       IP R       P +   Y  +   DG  +L
Sbjct: 239  GDTDGPSGVLVCAENKIAYKKPDHEDVVALIPRRQGMPLDQPLLITGYSHLKQKDGFFFL 298

Query: 270  LGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL- 328
            L    G L+ L +T+  E+V+ + I       +A +I+ L    +++ S +G+  L +  
Sbjct: 299  LQSEIGDLYRLTLTYNDEEVSEINITYFDTVPVAQSITILKTGFLFVASEFGNHALYQFL 358

Query: 329  --------NLQP---DAKGSYVEV-------------LERYVNLGPIVDFCVVDLERQGQ 364
                    ++ P   + +G  +E+             ++   +L PI+D  V+DL  +  
Sbjct: 359  SIKGSDESDMMPVEVEIEGETIEIPHFAPRPLKNLLLVDEMESLSPILDMRVLDLAGEET 418

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFIS 423
             Q+    G     +LR +R+G+ + E A  EL      +W+++ S+ D  D ++VV+F +
Sbjct: 419  PQIYALCGKGPRSTLRTLRHGLAVAEMAVSELPSNPLAVWTVKGSSKDAADKYIVVTFAN 478

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
             T +L++   D +EE    GF +  +TL       + L+QV    +R V S  R   +++
Sbjct: 479  ATIVLSIG--DTVEEVTDSGFLATNKTLSVSLLGDDSLLQVHPNGLRTVRSDKR--ISQF 534

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY---EISCLDINPI 540
              P    +N+   N  QV++A     ++Y E+ D +    + A+ E    +I+ LDI+P+
Sbjct: 535  TPPNKGVINLVAVNQQQVVVALADHTMIYFEL-DAVGQLQEKAKPEIGGGQIAALDISPL 593

Query: 541  GENPSYSQIAAVGMWTDIS--VRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS- 594
            G   S  +  AVG   D S  VRI SL     +++++++ L  +  P S  LC  E IS 
Sbjct: 594  GAGRSRGRFLAVGASVDGSWFVRILSLDPGSFMHIVSRQALPAK--PES--LCLIE-ISI 648

Query: 595  ------------YLLCALGDGHLLNFLLNMKTGELTDRKKVS-LGTQPITLRTFSSKNTT 641
                        +L   L +G L+   ++  TG+L    +   LGT+P+ L     +   
Sbjct: 649  GAAQSDGGTPTLFLFAGLENGVLMRITVDPITGQLAPEFRTRFLGTKPVKLFKVLVQEQP 708

Query: 642  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 701
             V A S R  + Y+   +   + ++ + + +   F S   P+         L I T++ +
Sbjct: 709  AVLALSSRSWLAYNFQGRYQITPLSYETLEYASGFASDQCPEGFVCVAANTLRILTVERL 768

Query: 702  -QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE------------------ 742
             +  +  S+ L   PR+    + S  F +    + S  E+++                  
Sbjct: 769  GEVFNQHSMKLSFTPRKSALLKDSGCFVVLETDHNSDMEKAKEARCDVAEDEEEENENKL 828

Query: 743  ---------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCV 786
                              VR++D    E      LD  E   S+   +F D   + + C 
Sbjct: 829  PHSIYGEQRAGEAKWASRVRVIDPNERETKQIIELDPNEAALSVCVATFYDRKGHTFLCF 888

Query: 787  GTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 846
            GTA      +    G +  + V   +L  + +    G   +L +F G+LL  +   ++LY
Sbjct: 889  GTAVGHKVGSRTGSGFLHTYSVVGSQLTFVHKTPIDGVPRALCSFQGRLLVGVGSALRLY 948

Query: 847  KWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 905
            +      G R+L  +C +     L + + T GD I VGD+ +SIS L Y      +   A
Sbjct: 949  EM-----GKRKLLRKCENRNIPNLVVTISTMGDRIYVGDVAESISFLKYNRILNELVIFA 1003

Query: 906  RDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERG-------------- 949
             D +  WM+A   +D D   GA+   N+F  R   N      EE G              
Sbjct: 1004 DDTHPRWMTAACPVDYDTVAGADKFGNIFLTRLPDNVSDEISEEPGAVGMFEGNDLQGAH 1063

Query: 950  -RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYL 1007
             + E + +YH+GE V   +  +L         G    +I+GT+ G IG +   +  E   
Sbjct: 1064 YKAEEIVQYHVGETVCSLQKATL-------SPGGSDAIIYGTMYGGIGALQPFVSREDVD 1116

Query: 1008 FLEKLQTNLRKVI---------KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
            F   L+ +LR            +G+ G +   +RS+         K+ +DGDL E+F  L
Sbjct: 1117 FFLHLEMHLRGAAGAREHKPAGEGICGRDQLSFRSY-----YFPVKDVVDGDLCETFNYL 1171

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
            S +R  +I++ ++ +  E+ K++E++
Sbjct: 1172 SPSRQKQIAEDLDRTPGEVAKKLEDM 1197


>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis niloticus]
          Length = 1217

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 279/1241 (22%), Positives = 517/1241 (41%), Gaps = 195/1241 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T  + T +TH+  GNF+  +   +++++   +E  LL P      +  +L V ++G 
Sbjct: 4    YNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILE--LLRPDANTGKVHTLLTVEVFGI 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ 
Sbjct: 62   IRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHP-SKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 241  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L     G +  + +  ++E VT ++++      +A+ +  L    +++ S +G+
Sbjct: 296  KSMFFFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                          QP    + V V E+  NL PI+   + D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQE-NLSPIMSCQIAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W++R   +D FD ++
Sbjct: 415  LANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+
Sbjct: 533  --VNEWKTPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEG 592
             +  +      S+  AVG+  D +VRI SL     L  ++ + L  +  P S+ +    G
Sbjct: 591  SLANVPPGEQRSRFLAVGL-ADNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGG 647

Query: 593  IS--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +               YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 648  VEKQDELGDKGTIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + + +   F S   P+ +       L I  +
Sbjct: 708  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 767

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQE-----------QSRTFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E            + T A  + + Q  AEE     
Sbjct: 768  EKLGAVFNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAA 827

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           VRL++      +    L+  E 
Sbjct: 828  GEDERELAAEMAAAFLNENLPEAIFGSPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEA 887

Query: 768  GCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKG 823
              S+ +C F++  + +Y  VG A  ++        G I  + +  G  KL+ + +   + 
Sbjct: 888  AFSVAACRFTNTGDDWYVLVGVARDMILNPRSVGGGFIYTYRLVSGGEKLEFVHKTPVED 947

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVV 882
               ++  F G+ L  + + +++Y     D G ++L  +C   H   L   + T G  ++V
Sbjct: 948  VPLAIAPFQGRALVGVGKLLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S+  + Y+  E  +   A D    W++   +LD D    A+   N+  VR   N+
Sbjct: 1003 SDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMAAADKFGNISIVRLPPNT 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       E++  YH+GE V   +  +L+        G   
Sbjct: 1063 SDDVDEDPTGNKALWDRGLLNGASQKAEIIMNYHVGETVLSLQKTTLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ T++G IG++     HE + F + L+ ++R     + G +H  +RS+         
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 1171 KNVIDGDLCEQFNSMDPHKQKSVAEELDRTPPEVSKKLEDI 1211


>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus A1163]
          Length = 1225

 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 289/1223 (23%), Positives = 510/1223 (41%), Gaps = 171/1223 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++
Sbjct: 6    NMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I TL  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRTLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  +++ +L  +  +   + Q +         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  +A    T             YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRK-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       GVL+  E+ I Y  +N  AF+  IP R   T+   R  +  +  +     
Sbjct: 243  QVPGGADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKMRG 302

Query: 275  GLLHLL-------------VITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
                LL             ++  +  ++TG    LKI+      IAS++  L +  +Y+ 
Sbjct: 303  AFFFLLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLYVA 362

Query: 318  SSYGDSQLIKL---------------NLQPD-----------AKGS-YVEVLERYVNLGP 350
            S  G+    +                N   D            +G+  + ++E   +L P
Sbjct: 363  SEAGNHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFRPRGAENLNLVETLNSLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  +V+L      Q+ T SG+    S R +++G+ ++E    EL  +   +W+ + + 
Sbjct: 423  LIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
             D FD ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  ADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541  RHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQ 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
            +   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALN 657

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + +    S      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S K  
Sbjct: 658  IMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            T V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I
Sbjct: 718  TAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSI 777

Query: 699  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR---------- 747
            + +   +   SIPL   PRR+    +   F +    N   +  +    +           
Sbjct: 778  EKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDSKARNGETN 837

Query: 748  LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSFSD-DSNVYY 784
            +L  + F +                      IST  L+  E   S+ +  FS  D   + 
Sbjct: 838  VLPPEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAAVPFSSQDDETFL 897

Query: 785  CVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAIN 840
             VGTA  +   N P+     + I    EDGK L+ I + + +    +L  F G+LLA I 
Sbjct: 898  VVGTAKDM-IVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAGIG 956

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMKSISLLIYKHE 897
              +++Y     D G ++L  +C     +++  +   QT+G  IVV D+ +S++ ++YK++
Sbjct: 957  STLRIY-----DLGMKQLLRKC--QAQVVSKTIVGLQTQGSRIVVSDVRESVTYVVYKYQ 1009

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE-------- 946
            +  +     D  + W ++  ++D +   G +   NL+ VR   K SE A ++        
Sbjct: 1010 DNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEEADEDGSGAHLIH 1069

Query: 947  ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 999
            ERG       RL+++   +  +         LV        G    +++    G IG++ 
Sbjct: 1070 ERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQLV-------AGGRDILVWTGFQGTIGMLV 1122

Query: 1000 S-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  L
Sbjct: 1123 PFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEMYFLL 1177

Query: 1059 SRTRMDEISKTMNVSVEELCKRV 1081
                   I+  ++ SV E+ +++
Sbjct: 1178 PNDTKMMIAAELDRSVREIERKI 1200


>gi|261196131|ref|XP_002624469.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
 gi|239587602|gb|EEQ70245.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
 gi|239614558|gb|EEQ91545.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis ER-3]
 gi|327356791|gb|EGE85648.1| pre-mRNA-splicing factor rse1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1209

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 279/1230 (22%), Positives = 516/1230 (41%), Gaps = 179/1230 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG ++ +    ++
Sbjct: 6    SLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRSLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I TL  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRTLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +   + Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALAALDVGYD 184

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  +  +A             +H+  YE+ L     V   WS + +D  A +L 
Sbjct: 185  NPIFAALEVEYAEADQDPTGQAYEELEKHLVYYELDLGLNHVVRK-WS-DPVDRSATMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       G L+  E+ I Y  +N  AF+  IP R   T+     + +  RY+    A
Sbjct: 243  QVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---A 294

Query: 275  GLLHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H +                     ++  +  ++TG    LK++      IAS++  L
Sbjct: 295  GVMHKMRGAFFFLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKLNL--------------------QPDAKGSY-------VEVL 342
             +  +++ S  G+    +                       +P A   +       V ++
Sbjct: 355  KSGFLFVASETGNHHFYQFEKLGDDDDEIEFTSDSYSADPSEPLAPAYFRPRPYENVNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   +L P++D  V +L      Q+ T  G     S R +++G+ ++E    EL  +   
Sbjct: 415  ESINSLNPLMDCKVANLTDDDAPQIYTICGTGARSSFRTLKHGLEVSEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTREDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSL 590

Query: 521  TEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E  +  ++   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K     
Sbjct: 591  AEYDEKREMSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLENKSVQAL 649

Query: 579  EIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L
Sbjct: 650  TSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
               S K    + A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FQVSVKEQKAILALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCIEGMVGIQG 769

Query: 691  GELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR-- 747
              L I +++ ++  L   +IPL   PR      +   F +    N   +  +    +   
Sbjct: 770  QNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEHPLFYVIEADNNILSPGTRTKLLNDS 829

Query: 748  --------LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSFS 777
                    +L  + F +                      IS   L+  E   S+ + +FS
Sbjct: 830  GAVNGDAMVLPPEEFGYPRGTGHWASCIQIVDPVNSQSVISQIELEENEAAVSVAAVTFS 889

Query: 778  D-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNG 833
              D   +  VGT   ++      + G I V+   E+GK L+ I + + +    +L  F G
Sbjct: 890  SQDDETFLVVGTGKDMVVNPRSSSAGFIYVYRFQEEGKELEFIHKTKVEQPPMALLGFQG 949

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            +LLA I   +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S++ ++
Sbjct: 950  RLLAGIGTDVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESVTYVV 1005

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG- 949
            YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++  G 
Sbjct: 1006 YKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPEKASEEADEDGSGA 1065

Query: 950  --------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 995
                          RL +V  ++  +     +   LV        G    +++  + G +
Sbjct: 1066 HLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDVLVWTGLQGTV 1118

Query: 996  GV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
             + I  +  E+  F + L+  L      + G +H  +RS+        AK  +DGDL E+
Sbjct: 1119 AMLIPFVSREEVDFFQSLEMQLSSQNPPLAGRDHLIYRSY-----YAPAKGTIDGDLCET 1173

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1174 YLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
 gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
          Length = 1209

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 293/1225 (23%), Positives = 513/1225 (41%), Gaps = 171/1225 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  +I     + L  V+  +++ +L  +  +   + Q L         G   
Sbjct: 126  YLAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALDVGYEN 185

Query: 175  PTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  ++             +H+  YE+ L     V   WS + +D  A LL  
Sbjct: 186  PVFAALEVDYSESDQDPTGQAFDELEKHLVYYELDLGLNHVVRK-WS-DPVDRTASLLFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRP----------SITKAYGRVDADG 265
            VP       GVL+  E+++ Y  +N  AF+  IP R           SIT          
Sbjct: 244  VPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGATENPERKRSITAGVMHKMRGA 303

Query: 266  SRYLLGDHAGLLHLLVITHEKE---KVTG----LKIELLGETSIASTISYLDNAVVYIGS 318
              +LL    G L  L I   ++   ++TG    LKI+      +AS++  L +  +Y+ S
Sbjct: 304  FFFLLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVAS 363

Query: 319  SYGDSQLIKLNLQPD--------------------------AKGSY-VEVLERYVNLGPI 351
              G+    +     D                           +G+  + ++E   +L P+
Sbjct: 364  EAGNHHFYQFEKLGDDDEEIEFTSESFSADPSVPCDPIYFRPRGAENLNLVETINSLNPL 423

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
            +D  VV++      Q+ T SGA    S R +++G+ ++E    EL  +   +W+ + +  
Sbjct: 424  IDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRS 483

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D FD ++++SF + T +L++   + +EE    GF S   TL       + L+Q+    +R
Sbjct: 484  DEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIR 541

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQL 528
             + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q+
Sbjct: 542  HILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQM 599

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ +
Sbjct: 600  SGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSALNI 658

Query: 588  CAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
             +    S      YL   L  G  L  +L+  TGEL+D +   LG++P+ L   S K  T
Sbjct: 659  MSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQT 718

Query: 642  HVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
             V   S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+
Sbjct: 719  AVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIE 778

Query: 700  DI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR----------L 748
             +   +  +SIPL   PRR     +   F +    N   A  +    +           +
Sbjct: 779  KLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLAPSTRAKLLEDSKSRGGDETV 838

Query: 749  LDDQTFEF----------------------ISTYPLDTFEYGCSILSCSF-SDDSNVYYC 785
            L  + F +                      + T  L+  E   SI +  F S D   +  
Sbjct: 839  LPPEDFGYPRATGHWASCIQVVDPLDAKAVVHTIELEENEAAISIAAVPFTSQDDETFLV 898

Query: 786  VGTAYVLPEENEP--TKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
            VGTA  +   N P    G I ++   EDG+ L+ I + + +    +L  F G+L+A I  
Sbjct: 899  VGTAKDM-TVNPPGSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLALLGFQGRLVAGIGS 957

Query: 842  KIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
             +++Y     D G ++L  +C        I+ L  QT+G  IVV D+ +S++ ++YK++E
Sbjct: 958  LLRIY-----DLGMKQLLRKCQAPVVPKTIVGL--QTQGSRIVVSDVRESVTYVVYKYQE 1010

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------E 947
              +     D  + W +A  ++D +   G +   NL+ +R   K SE A ++        E
Sbjct: 1011 NVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEEADEDGSGAHLIHE 1070

Query: 948  RG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
            RG       RLE++   +  +         LV        G    +++    G IG++  
Sbjct: 1071 RGYLQGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILVWTGFQGTIGMLVP 1123

Query: 1001 -LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  L 
Sbjct: 1124 FIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEMYFLLP 1178

Query: 1060 RTRMDEISKTMNVSVEELCKRVEEL 1084
                  I+  ++ SV E+ +++ ++
Sbjct: 1179 NDTKMMIAAELDRSVREIERKISDM 1203


>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
          Length = 1217

 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 281/1241 (22%), Positives = 517/1241 (41%), Gaps = 195/1241 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T  + T +TH+  GNF+  +   +++++   IE  LL P      +  +L + ++G 
Sbjct: 4    YNLTLQRATGITHAIHGNFSGTKMQEIVVSRGKIIE--LLRPDANTGKVHTLLTMEVFGI 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ 
Sbjct: 62   IRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHP-SKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 241  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L     G +  + +  ++E VT ++++      +A+++  L    +++ S +G+
Sbjct: 296  KSMFFFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATSMCVLKTGFLFVSSEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                          QP    + V V E+  NL PI+   + D
Sbjct: 356  HYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQE-NLSPIMSCQIAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W++R   +D FD ++
Sbjct: 415  LANEDTPQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+
Sbjct: 533  --VNEWKTPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEG 592
             +  +      S+  AVG+  D +VRI SL     L  ++ + L  +  P S+ +    G
Sbjct: 591  SLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGG 647

Query: 593  IS--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +               YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 648  VEKEDELGVKGTVGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + + +   F S   P+ +       L I  +
Sbjct: 708  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 767

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQE-----------QSRTFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E            + T A  + + Q  AEE     
Sbjct: 768  EKLGAVFNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAA 827

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           VRL++      +    L+  E 
Sbjct: 828  GEDERELAAEMAAAFLNENLPEAIFGAPKAGSGQWASLVRLVNPIQGTTLDLVQLEQNEA 887

Query: 768  GCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKG 823
              S+  C F+     +Y  VG A  ++        G I  + +  G  KL+ + +   + 
Sbjct: 888  AFSVTVCRFASGGEDWYVLVGVARDMILNPRSVGGGFIYTYRLGGGGDKLEFMHKTPVED 947

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVV 882
               ++  F G++L  + + +++Y     D G ++L  +C   H   L   + T G  ++V
Sbjct: 948  VPLAIAPFQGRVLVGVGKLLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S+  + YK  E  +   A D +  W++   +LD D    A+   N+  VR   N+
Sbjct: 1003 TDVQESLFWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNT 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       EV+  YH+GE V   +  +L+        G   
Sbjct: 1063 SDDVDEDPTGNKALWDRGLLNGASQKAEVIMNYHIGETVLSLQKTTLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ T++G IG++     HE + F + L+ ++R     + G +H  +RS+         
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 1171 KNVIDGDLCEQFNSMDPHKQKSVAEELDRTPPEVSKKLEDI 1211


>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
            181]
 gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
            181]
          Length = 1209

 Score =  233 bits (593), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 287/1226 (23%), Positives = 508/1226 (41%), Gaps = 171/1226 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++
Sbjct: 6    NMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  +++ +L  +  +   + Q +         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  +A    T             YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRK-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       GVL+  E++I Y  +N  AF+  IP R   T+   R  +  +  +     
Sbjct: 243  QVPGGADGPSGVLVCAEDSITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKMRG 302

Query: 275  GLLHLL-------------VITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
                LL             ++  +  ++TG    LKI+      IAS +  L +  +Y+ 
Sbjct: 303  AFFFLLQTEDGDLFKVTIDMVEDDSGQLTGEVKRLKIKYFDTVPIASNLLILKSGFLYVA 362

Query: 318  SSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNLGP 350
            S  G+    +                N   D    Y            + ++E   +L P
Sbjct: 363  SEAGNHHFYQFEKLGDDDEETEFSSENFPADPSVPYEPVFFRPRGAENLNLVETLNSLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  +V+L      Q+ T SG     S R +++G+ ++E    EL  +   +W+ + + 
Sbjct: 423  LIDSKIVNLNEDDAPQIYTVSGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
             D FD ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  ADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541  RHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQ 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
            +   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALN 657

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + +    S      YL   L  G  L  +L+  TGEL+D +   LG + + L   S K  
Sbjct: 658  IMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKQVKLFRVSVKGQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            T V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I
Sbjct: 718  TAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSI 777

Query: 699  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR---------- 747
            + +   +   SIPL   PRR+    +   F +    N   +  +    +           
Sbjct: 778  EKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDSKARNGETN 837

Query: 748  LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSFSD-DSNVYY 784
            +L  + F +                      IST  L+  E   S+ +  FS  D   + 
Sbjct: 838  VLPPEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAAVPFSSQDDETFL 897

Query: 785  CVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAIN 840
             VGTA  +   N P+     + I    EDGK L+ I + + +    +L  F G+LLA I 
Sbjct: 898  VVGTAKDM-IVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAGIG 956

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMKSISLLIYKHE 897
              +++Y     D G ++L  +C     +++  +   QT+G  I+V D+ +S++ ++YK++
Sbjct: 957  STLRVY-----DLGMKQLLRKC--QAPVVSKTIVGLQTQGSRIIVSDVRESVTYVVYKYQ 1009

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE-------- 946
            E  +     D  + W ++  ++D +   G +   NL+ VR   K SE A ++        
Sbjct: 1010 ENVLIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEEADEDGSGAHLIH 1069

Query: 947  ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 999
            ERG       RL+++   +  +         LV        G    +++    G IG++ 
Sbjct: 1070 ERGYLHGTPNRLDLMIHTYTQDIPTSLHKTQLV-------AGGRDILVWTGFQGTIGMLV 1122

Query: 1000 S-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  L
Sbjct: 1123 PFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEMYFLL 1177

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
                   I+  ++ SV E+ +++ ++
Sbjct: 1178 PNDTKMMIAAELDRSVREIERKISDM 1203


>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1209

 Score =  232 bits (592), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 302/1226 (24%), Positives = 518/1226 (42%), Gaps = 173/1226 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT +T + +G F   ++  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTRDQQIVTASGSKLTIHRPDPAQGKITPLFSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRVAGSSKDYIIIGSDSGRITIVEY-VPSQNRFNRIHMETFGKSGVRRVVPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L    +    G   
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQNLVFAMICLDVGYDN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  +A    T             YE+ L     V   WS + +D  A +L  
Sbjct: 186  PVFAALEVDYSEADQDPTGQAYEEIEKVLVYYELDLGLNHVVRK-WS-DPVDRTASMLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSR------ 267
            VP     P   GVL+  E+ + Y  +N  AF+  IP R   T+   R  +  S       
Sbjct: 244  VPGGDDGP--SGVLVCAEDNVTYRHSNQGAFRVPIPRRSGATENPERKRSIVSGVMHKMR 301

Query: 268  ----YLLGDHAG---LLHLLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYI 316
                +LL    G    L+L ++  ++ K TG    L I+      +++ +  L +  +Y 
Sbjct: 302  GAFFFLLQTEDGDLFKLNLEMVEDKQGKPTGEVKRLTIKYFDTIPVSTNLLILKSGFLYA 361

Query: 317  GSSYGDS---QLIKLNLQPD-----------------------AKGS-YVEVLERYVNLG 349
             S  G+    Q  KL   P                         +G+  V ++E   +L 
Sbjct: 362  ASESGNHNFYQFEKLGDDPSEAFFSSDSFSADPSVPLTPIYFHPRGAENVNLMESMNSLS 421

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  +++L      Q+ T  G+    + R +++G+ ++E    +LQ +   +W+ + +
Sbjct: 422  PLIDSKILNLSEDDAPQIYTICGSGARSTFRTLKHGLEVSEIVESDLQQVPSAVWTTKLT 481

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
              D F T++++SF + T +L++   + +EE    GF S   TL       + LVQV    
Sbjct: 482  RGDEFHTYIILSFANGTLVLSIG--EIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRG 539

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHA 526
            +R + +  R   NEW +P   S+  A AN  QV +A   G +VY E+  DG L E  +  
Sbjct: 540  IRHILADQRV--NEWPAPQHRSIVAAAANERQVAVALSSGEIVYFEMDADGTLAEYDERR 597

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
            Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P ++
Sbjct: 598  QMSGTVTSLSMGEVPEGRMRSSFLAVGC-DDSTVRILSLNPDSTLENKSVQALTSAPSAL 656

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + A    S      YL   L  G  L  +L+  TGEL+D +   +G +P+ L   S K 
Sbjct: 657  QIMAMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSVKG 716

Query: 640  TTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V A S RP + YS    K  + + ++   +     F+S    + +   +   L I T
Sbjct: 717  QTAVLALSTRPWLGYSDVQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMIGIQGRSLRIFT 776

Query: 698  IDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDD----- 751
            ++ +    ++ SIPL   PRR     +   F +    N   +  +     RL+DD     
Sbjct: 777  VEKLDNNMLQESIPLSYTPRRFVKHPEQPLFYVIESDNNVLSPATRQ---RLIDDSQAQN 833

Query: 752  ------------------------QTFEFISTYP------LDTFEYGCSILSCSFSD-DS 780
                                    Q  E I+T        L+  E   S+ + SFS  D 
Sbjct: 834  GEATDLPPADFGYPRATGHWASCIQVVEPITTKSVIFNLDLEDNEAAVSLAAVSFSSQDD 893

Query: 781  NVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
              +  VGTA    V P  +  + G I ++   EDG+ L+ I + +      +L  F G+L
Sbjct: 894  ETFLVVGTAKDMTVSPPSS--SCGFIHIYRFQEDGRELEFIHKTQVDEPPLALLGFQGRL 951

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLL 892
            LA I   +++Y     D G ++L  +C        I+ L  QT+G  I+V D+ +S++ +
Sbjct: 952  LAGIGPILRVY-----DLGMKQLLRKCQAPVVPKTIVGL--QTQGSRIIVSDVRESVTYV 1004

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--- 946
            +YK+++  +   A D  A W S+  ++D +   G +   NL+ VR   K SE A ++   
Sbjct: 1005 VYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNLWLVRCPSKVSEQADEDGSG 1064

Query: 947  -----ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIA 999
                 E+G L   G  H  E +  F    +   L  + +  G    V++    G IG+  
Sbjct: 1065 AHLIHEKGYLH--GTPHRLELMVHFYAQDIPTSLHKTQLVAGGRDIVVWTGFQGTIGMFV 1122

Query: 1000 SLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
                 E   F + L+T L      + G +H  +R +    K V     +DGDL E +L L
Sbjct: 1123 PFASREDVDFFQLLETQLASQQPPLAGRDHLMYRGYYAPVKGV-----IDGDLCEMYLLL 1177

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
                   I+  ++ SV E+ +++ ++
Sbjct: 1178 PNDTKLMIAGELDRSVREIERKISDM 1203


>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
          Length = 1212

 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 295/1229 (24%), Positives = 509/1229 (41%), Gaps = 174/1229 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PTNV  + +G F   +E  +I    +R+   LL P   Q     +L   
Sbjct: 6    NMFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGAGSRLA--LLRPDPSQGKVITLLSHD 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
            I+G I +L  FR  G  +D+L +AT+  +  ++++  + +      +        R    
Sbjct: 64   IFGIIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPKENRFTKLHLETFGKSGVRRVIP 123

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
            G+    DP  R  LI     + L  V+  +++ +L  +  +   +  VL I  +    G 
Sbjct: 124  GEYLACDPKGRACLIASIEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALDVGY 183

Query: 173  AKPTIVVLYQDNKDA---------RHVKT----YEVALKDKDFVEGPWSQNNLDNGADLL 219
            A P    L  D  +A         R ++T    YE+ L     V   WS+  +D+ A LL
Sbjct: 184  ANPVFAALEMDYTEADQDATGEAMRELETQLVYYELDLGLNHVVR-KWSEP-VDSTASLL 241

Query: 220  IPVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYL 269
              VP     P   GVL+ GEE I Y  +N  AF+  IP R   T+  +  R    G  + 
Sbjct: 242  FQVPGGNDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRTIISGVMHK 299

Query: 270  LGDHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDN 311
            L   AG    L+ T + +                  +V  LKI+       A+++  L +
Sbjct: 300  LKGSAGAFFFLLQTEDGDMFKVTIDMVEDDEGNTTGEVRRLKIKYFDTVPAAASLCILKS 359

Query: 312  AVVYIGSSYGD---SQLIKL------------NLQPDAKGSYVEV------------LER 344
              +Y+ S +G+    Q  KL            +   DA+ SY  V            +E 
Sbjct: 360  GFLYVASQFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYNPVYFYPRPLENLVLVES 419

Query: 345  YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMW 403
              ++ P++D  V +L  +   Q+ T  G     + R +++G+ INE  S EL GI   +W
Sbjct: 420  IPSMNPLLDCKVANLTNEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSELPGIPSAVW 479

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            +L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       + L+Q
Sbjct: 480  TLKLNRTEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDDGLIQ 537

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTE 522
            V    +R + +      N+W +P   S+  A+ NA QV +A   G +VY E+  DG L E
Sbjct: 538  VHPKGIRHIRNGQV---NQWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDDDGSLAE 594

Query: 523  VKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
                +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K       
Sbjct: 595  YDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQALTA 653

Query: 581  IPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             P S+ + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L  
Sbjct: 654  APTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQ 713

Query: 635  FSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
             + +  T V   S RP + Y+    K  + + +N  ++     F S    + +   +   
Sbjct: 714  VTVQGKTCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWNFTSEQCEEGIVGIQGQT 773

Query: 693  LTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV----- 746
            L I ++D +    I+ SIPL   P+++        F +    N + A E     +     
Sbjct: 774  LRIFSVDRLGDTLIQSSIPLTYTPKKMVKHPDHPLFYVIEADNHTLAPELCAKLLADPAR 833

Query: 747  -----RLLDDQTF-----------------------EFISTYPLDTFEYGCSILSCSFSD 778
                 ++L  + F                       + +    L+  E   S+   +F+ 
Sbjct: 834  VNGDTKILPAEEFGHPRGNRRWASCISVVDPLAEDGQVLQRIDLEENEAAVSVAIVTFAS 893

Query: 779  DSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 834
              N  +  VGT     V P         I  F  +   L  I + + +    ++  F G+
Sbjct: 894  QENETFLVVGTGKDMVVNPRSFSDAFVHIYRFERDGRGLVFIHKTKVEEPPMAMIPFQGR 953

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
            +L  I + +++Y   +R    R+ Q+E      I++L   T+G  IVVGD+ + I+  +Y
Sbjct: 954  VLVGIGKTLRIYDLGMR-QLLRKAQAEVAPQ-QIISL--STQGSRIVVGDVQQGITYAVY 1009

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG-- 949
            K     +     D  A W +   ++D +   G +   N+F VR   K SE A +E+ G  
Sbjct: 1010 KQSTNKLIPFVDDTVARWTTCTTMVDYETVAGGDKFGNIFIVRSPQKASEEADEEQAGLH 1069

Query: 950  -------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
                         RL+++      +        SLV       VG    +++  + G IG
Sbjct: 1070 LLNARDYLHGTSHRLDLMCHLFTQDIPTSIAKTSLV-------VGGQDVLLWSGLMGTIG 1122

Query: 997  V-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
            V I  +  E   F + L+ ++R     + G +H  +RS+         K  +DGDL E +
Sbjct: 1123 VLIPFITREDTDFFQSLEQHMRAEDPPLAGRDHLMYRSY-----YAPMKGIIDGDLCERY 1177

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L   +   I+  ++ SV E+ +++ ++
Sbjct: 1178 ALLPNDKKQMIAGELDRSVREIERKISDI 1206


>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
 gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
          Length = 1217

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 276/1241 (22%), Positives = 517/1241 (41%), Gaps = 195/1241 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T  + T ++H+  GNF+  ++  +++++   +E  LL P      +  +L + ++G 
Sbjct: 4    YNITLQRATGISHAIHGNFSGTKQQEIVVSRGKILE--LLRPDANTGKVHTLLTMEVFGV 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            + +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ 
Sbjct: 62   VRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHP-SKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 121  LAVDPKGRAVMIGATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 241  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L     G +  + +  ++E VT ++++      +A+ +  L    +++ S +G+
Sbjct: 296  KSMFFFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                          QP    + V V E+  +L PI+   + D
Sbjct: 356  HYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQE-SLSPIMSCQIAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W++R   +D FD ++
Sbjct: 415  LANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+
Sbjct: 533  --VNEWKTPGKKTIIRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEG 592
             +  +      S+  AVG+  D +VRI SL     L  ++ + L  +  P S+ +    G
Sbjct: 591  SLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGG 647

Query: 593  IS--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +               YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 648  VEKQDELGEKGTIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + + +   F S   P+ +       L I  +
Sbjct: 708  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 767

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQE-----------QSRTFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E            + T A  + + Q  AEE     
Sbjct: 768  EKLGAVFNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAA 827

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           VRL++      +    L+  E 
Sbjct: 828  GEDERELAAEMAAAFLNENLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEA 887

Query: 768  GCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKG 823
              S+  C F +  + +Y  VG A  ++        G I  + +  G  KL+ + +   + 
Sbjct: 888  AFSVAICRFLNGGDDWYVLVGVARDMILNPRSVGGGYIYTYRIVGGGDKLEFLHKTPVED 947

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVV 882
               ++  F G++L  + + +++Y     D G ++L  +C   H   L   + T G  ++V
Sbjct: 948  VPLAIAPFQGRVLVGVGKLLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S+  + Y+  E  +   A D    W++   +LD D    A+   N+  VR   N+
Sbjct: 1003 SDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNT 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       E++  YH+GE V   +  +L+        G   
Sbjct: 1063 SDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ T++G IG++     HE + F + L+ ++R     + G +H  +RS+         
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1171 KNVIDGDLCEQFNSMDPHKQKSVSEELDRTPPEVSKKLEDI 1211


>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
          Length = 1202

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 273/1217 (22%), Positives = 511/1217 (41%), Gaps = 160/1217 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T  +P+ +T + +G F+  ++  +I+A+ +R+   LL P   Q     +L + 
Sbjct: 6    NMFMYSLTVLQPSAITQAILGAFSGKKQQEIIVAQGSRLS--LLRPDAAQGKVHSVLTID 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
            ++G I  L  FR  G ++D++ + ++  +  +L++  + ++     +        R    
Sbjct: 64   VFGIIRCLAAFRLAGSSKDYVIVGSDSGRITILEYQPQVNKFHRLHLETFGKSGVRRVIP 123

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
            GQ    DP  R  LI     + L  V+  + + +L  +  +   +   L    +    G 
Sbjct: 124  GQFLACDPKGRACLISSVEKNKLVYVLNRNAQAELTISSPLEAHKPHCLVFALVALDVGY 183

Query: 173  AKPTIVVLYQD----NKDARHVKT---------YEVALKDKDFVEGPWSQNNLDNGADLL 219
              P    L  D    ++DA  V           YE+ L     V   WS + +D  A++L
Sbjct: 184  DNPVFAALEVDYGESDQDATGVAYENIEKMLVYYELDLGLNHVVRK-WS-DTVDRSANIL 241

Query: 220  IPVPPPL---CGVLIIGEETIVYCS-ANAFKAIPI------------RPSITKAYGRVDA 263
              VP       GVL+  E++I Y     +   +PI            R +I         
Sbjct: 242  FQVPGGTDGPSGVLVCAEDSIYYRHMGRSTHRVPIPRRRGACEDPNRRRTIISGVMHKMR 301

Query: 264  DGSRYLLGDHAGLLHLLVITHEKEK-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                +LL    G L  + + ++ E  V+ +K++      IAS++  L +  +++ S  G+
Sbjct: 302  GAFFFLLQTEDGDLLKVTLDYDDESGVSRIKVKYFDTVPIASSLCILKSGFLFVASEGGN 361

Query: 323  SQLIKL---------------NLQPDAKGSYVEV------------LERYVNLGPIVDFC 355
                +                N  PD     V +            +E   ++ P+VD  
Sbjct: 362  HHFYQFEKLGDDDEEIEFSSDNFSPDPLDRTVPIYFHPRAPENLSLVEAIDSMNPLVDCK 421

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFD 414
            + +L      Q+ T  G+    + R +++G+   E  S EL G+   +W+ + +  D FD
Sbjct: 422  IANLTDDDAPQIYTVCGSGPRSTFRTLKHGLETTEIVSSELPGVPSAVWTTKLTNGDEFD 481

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    +R + +
Sbjct: 482  AYIVLSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDALLQVHPKGIRHIRA 539

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA-QLEYEI 532
              R   NEW +P   S+  A+ N+ QV +A   G +VY E+  DG L E +   ++   +
Sbjct: 540  DRRV--NEWPAPQHRSIVAASTNSRQVAVALSSGEIVYFEMDSDGQLAEYEEKKEMSGTV 597

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFE 591
            +CL +  + E    S   AVG   D +VRI SL PD  L +K        P S+ + +  
Sbjct: 598  TCLSLGEVPEGRVRSSFLAVGC-DDATVRILSLDPDSTLESKSVQALTSAPSSLCIMSMP 656

Query: 592  GIS---------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
              +         YL   L  G  L  +L+  TGELTD +   LG +P+ +    ++    
Sbjct: 657  DSASETSRSLTLYLHIGLYSGVYLRTVLDTVTGELTDTRTRFLGPKPVKIFKVIAQGLPS 716

Query: 643  VFAASDRPTVIYSSNK-KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 701
            V A S RP + YS  + + + + +    +     F+S   P+ +   +   L I TI+ +
Sbjct: 717  VLALSSRPWLGYSDARGQFMLTPLTYPMLEWGWTFSSEQCPEGMVGIQGQNLRIFTIEKL 776

Query: 702  -QKLHIRSIPLGEHPRRICHQEQSRTFAIC-----------------SLKNQSCAEESEM 743
               L   SIPL   PR++        F +                  S +N    E +  
Sbjct: 777  TDNLQQESIPLSYTPRKMLKHPDQPVFYVAEADANTLSVATKQKLMNSAQNGDTNELAPA 836

Query: 744  HF------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAY 790
             F            + ++D  + E      L+  E   SI + SFS  D   +  VGT  
Sbjct: 837  EFGNPRGEGHWASCISVVDPISKEVTQRIELEENEAAFSIAAVSFSSQDDEWFLVVGTGK 896

Query: 791  ---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 847
               + P ++      I  F+ +  +L+ I + +      +L  F G+LLA I + +++Y 
Sbjct: 897  DTCLSPRKSANGYIHIYRFLNDGKELEFIHKTKVDEPPLALLGFQGRLLAGIGKDLKIY- 955

Query: 848  WMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
                D G ++L  +  G     +   +QT+G  I+V D+ +S++ ++YK+++  +   A 
Sbjct: 956  ----DLGMKQLLRKAQGQVAPNVINGLQTQGSRIIVSDVQESVTYVVYKYQDNRLIPFAD 1011

Query: 907  DYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG-------------- 949
            D    + +   ++D +   G +   N + VR   K S+ + ++  G              
Sbjct: 1012 DMIPRFTTCTTMVDYETVAGGDRFGNFWIVRCPQKASDESDEDPAGGHLIHERSYLQGAP 1071

Query: 950  -RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYL 1007
             RL ++  ++  +     +   LV        G   T+++  + G IG++   +  E   
Sbjct: 1072 NRLNLMCHFYPQDIPTSVQKAQLV-------TGGRDTLVWTGLQGTIGLMVPFVSREDVD 1124

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 1067
            F + L+ ++R     + G +H  +RS+      V  K  +DGDL E++  LSR +   I+
Sbjct: 1125 FFQTLEQHMRTEDAPIAGRDHLIYRSY-----YVPVKGVIDGDLCENYSLLSRDKKAMIA 1179

Query: 1068 KTMNVSVEELCKRVEEL 1084
              ++ SV E+ +++ ++
Sbjct: 1180 AELDRSVREVERKIADM 1196


>gi|367050506|ref|XP_003655632.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
 gi|347002896|gb|AEO69296.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
          Length = 1211

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 284/1221 (23%), Positives = 511/1221 (41%), Gaps = 167/1221 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y +T   PT +T + +G F+  +E  +I A  +R+ +    P QG +  ++   I+G I 
Sbjct: 10   YSLTIQPPTTITQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTLMSHDIFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D++ +AT+  +  ++++  + +      +        R    GQ    
Sbjct: 70   SLASFRLAGSHKDYIILATDSGRIAIVEYLPKENRFSRIHLETFGKSGVRRVIPGQYLAA 129

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  LI     + L  V+  + + +L  +  +   +  VL +  +    G A P   
Sbjct: 130  DPKGRACLIASIEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALDVGYANPVFA 189

Query: 179  VLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP--- 223
             L  D  +A    T E   + +            + V   WS + +D  + LL  VP   
Sbjct: 190  ALEIDYSEADQDPTGEAGREAEAQLVYYELDLGLNHVVRKWS-DTVDPTSSLLFQVPGGN 248

Query: 224  --PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHAGL 276
              P   GVL+ GEE + Y  +N  AF+  IP R   T+     R    G  + L   AG 
Sbjct: 249  DGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRRGATEDPQRKRTIVSGVMHKLKGSAGA 306

Query: 277  LHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIGS 318
               L+ T + +                  +V  LKI+      IA ++  L +  ++  S
Sbjct: 307  FFFLLQTDDGDLFKVTIDMVEDSEGNPTGEVRRLKIKYFDTIPIAHSLCILKSGFLFAAS 366

Query: 319  SYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNLGPI 351
             +G+    +                +   D + SY            + ++E   ++ P+
Sbjct: 367  EFGNHHFYQFEKLGDDDEEPEFTSDDFPTDPRASYNPVYFHPRPLENLALVESLNSMNPL 426

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
            VD  V +L  +   Q+    G     + R++++G+ ++E  + EL G    +W+ + +  
Sbjct: 427  VDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASELPGTPSAVWTTKLTKY 486

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D +D ++V+SF + T +L++   + +EE    GF +   TL         L+QV    +R
Sbjct: 487  DEYDGYIVLSFTNATLVLSIG--ETVEEVTESGFLTSVPTLAVQQLGEEGLIQVHPKGIR 544

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQL 528
             +        NEW +P   S+  A  N SQV++A   G +VY E+  DG L E  +  ++
Sbjct: 545  HIVQGRV---NEWPAPQHRSIVAAATNESQVVIALSSGEIVYFEMDADGSLAEYDEKKEM 601

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               ++ L +  + E  + S   AVG   D +VRI  L P+  L  K        P S+ +
Sbjct: 602  SGTVTSLSLGKVPEGLTRSSFLAVGC-DDCTVRILGLDPESTLEMKSIQALTSAPSSLSI 660

Query: 588  CAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
             + E  +     YL   L  G  L  +L+  TGELTD +   LG +P  L   S +N   
Sbjct: 661  MSMEDSTGGNTLYLHIGLHSGVYLRTVLDEVTGELTDTRSKFLGPKPTKLFQVSVQNQPC 720

Query: 643  VFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            V A S RP + Y    +K  + + ++  E+ +   F+S    + +       L I TI+ 
Sbjct: 721  VLALSSRPWLGYMDPLSKNFVMTPLSYAELEYGWNFSSEQCLEGMVGIHANFLRIFTIEK 780

Query: 701  IQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICS--------LKNQSCAEESEMHF-VRLL 749
            + +  I +SIPL   P+R+  H EQ   + I +        L+ Q  A+   ++    +L
Sbjct: 781  LGETMIQKSIPLTYTPKRLVKHPEQPYFYTIEADNNTLPPELRAQLLAQSGAVNGDATVL 840

Query: 750  DDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF-SDDSNVYYC 785
              + F +                +S  P       L+  E   S     F S +   +  
Sbjct: 841  PPEDFGYPRAKGRWASCISVVDPVSEEPRVLQRVDLEGNEAAVSAAVVPFASQEGESFLI 900

Query: 786  VGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
            VGT   ++    + T+G I V+   EDG+ L+ I +   +    +L  F G+LLA I + 
Sbjct: 901  VGTGKDMVLNPRQFTEGYIHVYRFHEDGRSLEFIHKTRVEEPPMALIPFQGRLLAGIGKT 960

Query: 843  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 902
            +++Y   LR    + L+   G     L + +QT+G+ IVVGD+ + ++ ++YK E   + 
Sbjct: 961  LRVYDLGLR----QLLRKAQGEVAQQLIVSLQTQGNRIVVGDVQQGVTYVVYKPESNKLI 1016

Query: 903  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER-------------- 948
                D    W + + ++D +   G +   NL+ VR     + + +               
Sbjct: 1017 PFVDDTINRWTTCITMVDYESVAGGDRFGNLWIVRAPERASQESDEPGSEVQLLHARSYL 1076

Query: 949  ----GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPH 1003
                 RL ++  ++  +        +LV       VG    +++  + G +GV I  +  
Sbjct: 1077 HGAPNRLNLMAHFYPQDLPTSITKTNLV-------VGGQDVLVWSGIQGTVGVLIPFVSR 1129

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            E   F + L++++R     + G +H  +R +      V  K  +DGDL E F  L   + 
Sbjct: 1130 EDVDFFQNLESHMRSEDPPLAGRDHLIYRGY-----YVPVKGVIDGDLCERFSLLPNDKK 1184

Query: 1064 DEISKTMNVSVEELCKRVEEL 1084
              I+  ++ SV E+ +++ ++
Sbjct: 1185 QMIAGELDRSVREVERKISDI 1205


>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
 gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
            [Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
            nidulans FGSC A4]
          Length = 1209

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 296/1222 (24%), Positives = 506/1222 (41%), Gaps = 165/1222 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVIPLYTQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I TL  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRTLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVVPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLD---IKFLYGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L    +    G   
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVYSVVALDAGYEN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  ++    T             YE+ L     V   W+ + +D  + +L  
Sbjct: 186  PVFAALEVDYSESDQDPTGRAYEEVEKLLVYYELDLGLNHVVR-KWT-DPVDRTSSMLFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPS----------ITKAYGRVDADG 265
            VP       GVL+  E+ I Y  +N  AF+  IP R            IT          
Sbjct: 244  VPGGADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRKGAMENPERKRCITAGVMHKMRGA 303

Query: 266  SRYLLGDHAG-LLHLLVITHEKEK------VTGLKIELLGETSIASTISYLDNAVVYIGS 318
              +LL    G L  L +   E +K      V GLKI+      +AS++  L +  +Y+ +
Sbjct: 304  FFFLLQTEDGDLFKLTLDMVEDDKGQLTGEVKGLKIKYFDTVPLASSLLILKSGFLYVAA 363

Query: 319  SYGDSQLIKL-----------------NLQPDAKGSYV----------EVLERYVNLGPI 351
              G+    +                  +  P A  + V           ++E   +L P+
Sbjct: 364  EGGNHHFYQFEKLGDDDEETEFNSDDFSADPAAPCTPVYFQPRGAENLNLVEAINSLNPL 423

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
            VD  VV++      Q+ T SG     + R +++G+ ++E    EL  +   +W+ + +  
Sbjct: 424  VDSKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRA 483

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+Q+    +R
Sbjct: 484  DEFDAYIVLSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIR 541

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQL 528
             + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q+
Sbjct: 542  HILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDADGSLAEYDERRQM 599

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ +
Sbjct: 600  SGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDTTLENKSVQALTAAPSALNI 658

Query: 588  CAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
             A    S      YL   L  G  L   L+  TGEL+D +   LG++ + L   S    T
Sbjct: 659  IAMADSSSGGTTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQT 718

Query: 642  HVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
             V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+
Sbjct: 719  AVLALSSRPWLGYSDTQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIE 778

Query: 700  DI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFIS 758
             +   +  +SIPL   PR      +   F +    N   +  +     RLL+D       
Sbjct: 779  KLDNNMLQQSIPLAYTPRHFIKHPEEPLFYVIEADNNVLSPATR---ARLLEDSKARGGD 835

Query: 759  T---------YP--------------------------LDTFEYGCSILSCSF-SDDSNV 782
            T         YP                          L+  E   SI +  F S D   
Sbjct: 836  TTVLPPEDFGYPRGTGHWASCIQIIDPLDAKAVVGAVELEENEAAVSIAAVPFTSQDDET 895

Query: 783  YYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
            +  VGTA  +   N P+   G I ++   EDGK L+ I + + +    +L  F G+LLA 
Sbjct: 896  FLVVGTAKDM-TVNPPSSAGGYIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAG 954

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHE 897
            +   +++Y     D G ++L  +C       A+  +QT+G  IVV D+ +S++ ++YK++
Sbjct: 955  VGSVLRIY-----DLGMKQLLRKCQAAVAPKAIVGLQTQGSRIVVSDVRESVTYVVYKYQ 1009

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVV 954
            +  +     D  A W +A  ++D +   G +   NL+ VR   K SE A +E  G   + 
Sbjct: 1010 DNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWLVRCPKKASEEADEEGSGAHLIH 1069

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQIPTVIFGTVNGVIGVIAS-LP 1002
               +L    NR     L++ +   D+           G    +++    G IG++   + 
Sbjct: 1070 DRGYLQGTPNRLE---LMIHVFTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGILVPFVS 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  LS   
Sbjct: 1127 REDVDFFQSLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEQYFLLSNDT 1181

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1182 KMMIAAELDRSVREIERKISDM 1203


>gi|325096432|gb|EGC49742.1| pre-mRNA-splicing factor Rse1 [Ajellomyces capsulatus H88]
          Length = 1209

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 283/1232 (22%), Positives = 513/1232 (41%), Gaps = 183/1232 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P    ++ +    ++
Sbjct: 6    SLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTHGKIRTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I  L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRALAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +   + Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYD 184

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  +  +A             +H+  YE+ L     V   WS + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEADQDPTGQAYEELEKHLVYYELDLGLNHVVRK-WS-DPVDRSASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       G L+  E+ I Y  +N  AF+  IP R   T+     + +  RY+    A
Sbjct: 243  QVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---A 294

Query: 275  GLLH---------------------LLVITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H                     L ++  +  ++TG    LK++      IAS++  L
Sbjct: 295  GVMHKMRGAFFFLLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKL-------------------NLQPDAKGSY--------VEVL 342
             +  +++ S  G+    +                    +L      +Y        V ++
Sbjct: 355  KSGFLFVASETGNHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  +   
Sbjct: 415  ESIDSLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTREDEFDAYIILSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSL 590

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E    + +   ++CL +  +    + S   AVG   D +VRI SL P+  L  K     
Sbjct: 591  AEYDEKRAMSGTVTCLSLGEVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKSVQAL 649

Query: 579  EIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L
Sbjct: 650  TSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
               S K  T V A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FQVSVKEQTAVLALSSRPWLGYSHLQTKAFMLTPLDYVSLEWGWNFSSEQCVEGMVGIQG 769

Query: 691  GELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLL 749
              L I +++ ++  L   +IPL   PR      +   F +   +N   +  +     +LL
Sbjct: 770  QNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEHPLFYVIEAENNILSPGTR---TKLL 826

Query: 750  DDQTFEFISTYPLDTFEYG-----------------------------------CSILSC 774
            +D       T PL   E+G                                    S+ + 
Sbjct: 827  NDSDAVNGDTTPLPPEEFGYPRGTGHWASCIQIVDPINSKRVISQIELEENEAAVSVAAV 886

Query: 775  SFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 830
             FS  D   +  VGT   ++      T G I ++   E+GK L+ I + + +    +L  
Sbjct: 887  PFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQEEGKELEFIHKTKVEQPPMALLG 946

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
            F G+LLA I   +++Y   ++    R+ Q+    H   L + +QT+G  I+V D+ +S++
Sbjct: 947  FQGRLLAGIGTDLRIYDLGMK-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESLT 1002

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 947
             ++YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++ 
Sbjct: 1003 YVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDG 1062

Query: 948  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
             G               RL +V  ++  +     +   LV    D  V    T + GTV+
Sbjct: 1063 SGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVW---TGLQGTVS 1119

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +I  I+    E+  F + L+  L      + G +H  +RS+        AK  +DGDL 
Sbjct: 1120 MLIPFIS---REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E++L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1172 ETYLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
 gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
          Length = 1217

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 275/1241 (22%), Positives = 517/1241 (41%), Gaps = 195/1241 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T  + T ++H+  GNF+  ++  +++++   +E  LL P      +  +L + ++G 
Sbjct: 4    YNITLQRATGISHAIHGNFSGTKQQEIVVSRGKILE--LLRPDANTGKVHTLLTMEVFGV 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            + +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ 
Sbjct: 62   VRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHP-SKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R  ++G      L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 121  LAVDPKGRAVMMGATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 241  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L     G +  + +  ++E VT ++++      +A+ +  L    +++ S +G+
Sbjct: 296  KSMFFFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                          QP    + V V E+  +L PI+   + D
Sbjct: 356  HYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQE-SLSPIMSCQIAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W++R   +D FD ++
Sbjct: 415  LANEDTPQLYVACGRGPGSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+
Sbjct: 533  --VNEWKTPGKKTIIRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEG 592
             +  +      S+  AVG+  D +VRI SL     L  ++ + L  +  P S+ +    G
Sbjct: 591  SLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGG 647

Query: 593  IS--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +               YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 648  VEKQDELGEKGTICFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + + +   F S   P+ +       L I  +
Sbjct: 708  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 767

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQE-----------QSRTFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E            + T A  + + Q  AEE     
Sbjct: 768  EKLGAVFNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAA 827

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           VRL++      +    L+  E 
Sbjct: 828  GEDERELAAEMAAAFLNENLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEA 887

Query: 768  GCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKG 823
              S+  C F +  + +Y  VG A  ++        G I  + +  G  KL+ + +   + 
Sbjct: 888  AFSVAICRFLNGGDDWYVLVGVARDMILNPRSVGGGYIYTYRIVGGGDKLEFLHKTPVED 947

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVV 882
               ++  F G++L  + + +++Y     D G ++L  +C   H   L   + T G  ++V
Sbjct: 948  VPLAIAPFQGRVLVGVGKLLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S+  + Y+  E  +   A D    W++   +LD D    A+   N+  VR   N+
Sbjct: 1003 SDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNT 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       E++  YH+GE V   +  +L+        G   
Sbjct: 1063 SDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ T++G IG++     HE + F + L+ ++R     + G +H  +RS+         
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1171 KNVIDGDLCEQFNSMDPHKQKSVSEELDRTPPEVSKKLEDI 1211


>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
 gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
          Length = 1209

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 289/1228 (23%), Positives = 512/1228 (41%), Gaps = 175/1228 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++
Sbjct: 6    NMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPAQGKITPIYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I TL  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRTLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  +++ +L  +  +   + Q +    +    G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMIALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  ++    T             YE+ L     V   W+ + +D  +++L 
Sbjct: 185  NPIFAALEVDYSESDQDPTGRAYEESEKVLVYYELDLGLNHVVRK-WA-DPVDRTSNMLF 242

Query: 221  PVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRV---------DA 263
             VP     P   GVL+  E+++ Y  +N  AFK  IP R   T+   R            
Sbjct: 243  QVPGGGDGP--SGVLVCAEDSVTYRHSNQDAFKVPIPRRSGATENPERKRTIVAGVMHKM 300

Query: 264  DGSRYLL--GDHAGLLHLLV--ITHEKEKVTG----LKIELLGETSIASTISYLDNAVVY 315
             G+ + L   D   L  + +  +  +  ++TG    LKI+      +AS +  L +  +Y
Sbjct: 301  RGAFFFLLQTDDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPVASNLLILKSGFLY 360

Query: 316  IGSSYGDSQLIKLNLQPD-------AKGSY--------------------VEVLERYVNL 348
            + S  G+    +     D       +  SY                    + ++E   +L
Sbjct: 361  VASEGGNHHFYQFEKLGDDDEEIEFSSESYSADPSVPCDPVFFRPRGAENLNLVESLNSL 420

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  + +L      Q+   SG     + R +++G+ ++E    EL  +   +W+ + 
Sbjct: 421  NPLIDSKIANLNEDDAPQIYAVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKL 480

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  D FD ++++SF + T +L++   + +EE    GF S   TL       + L+QV   
Sbjct: 481  TRGDEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPR 538

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KH 525
             +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  + 
Sbjct: 539  GIRHILADRRV--NEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGSLAEYDER 596

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
             Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P +
Sbjct: 597  RQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSA 655

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + + +    S      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S +
Sbjct: 656  LNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVR 715

Query: 639  NTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              T V A S RP + Y     K  + + ++   +     F+S    + +   +   L I 
Sbjct: 716  GQTAVLALSSRPWLGYCDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIF 775

Query: 697  TIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR-------- 747
            +I+ +    ++ SIPL   PRR+    +   F +    N   +  +    +         
Sbjct: 776  SIEKLDNNMLQESIPLSYTPRRLLKHPEQPLFYVIGSDNNVLSPATRARLIEDSKARNGE 835

Query: 748  --LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSFSD-DSNV 782
               L  + F +                      IST  L+  E   S+ +  FS  D   
Sbjct: 836  ADTLPPEEFGYPRATGHWASCIQVVDPVNAKAVISTIELEENEAAVSMAAVPFSSQDDET 895

Query: 783  YYCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
            +  VGTA  L   N P+     + I    EDGK L+ I + + +    +L AF G+L+A 
Sbjct: 896  FLVVGTAKDL-TVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLAFQGRLVAG 954

Query: 839  INQKIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            I   +++Y     D G ++L  +C        I+ L  QT+G  I+V D+ +S++ ++YK
Sbjct: 955  IGSILRIY-----DLGMKQLLRKCQAPVVPKTIVGL--QTQGSRIIVSDVRESVTYVVYK 1007

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE------ 946
            ++E  +     D  + WM++  ++D +   G +   NL+ VR   K SE A ++      
Sbjct: 1008 YQENVLIPFVDDTVSRWMTSTTMVDYETVAGGDKFGNLWLVRCPKKISEEADEDGSGAHL 1067

Query: 947  --ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 997
              ERG       RLE++   +  +         LV        G    +++    G IG+
Sbjct: 1068 IHERGYLHGTPNRLELMIHTYTQDIPTSVHKTQLV-------AGGRDILVWTGFQGTIGM 1120

Query: 998  IAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 1056
            +   +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E + 
Sbjct: 1121 LVPFMSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEMYF 1175

Query: 1057 DLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             L       I+  ++ SV E+ +++ ++
Sbjct: 1176 LLPNDTKMMIAAELDRSVREIERKISDM 1203


>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
          Length = 1209

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 288/1225 (23%), Positives = 514/1225 (41%), Gaps = 171/1225 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  +I     + L  V+  +++ +L  +  +   + Q L         G   
Sbjct: 126  YLAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALDVGYEN 185

Query: 175  PTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  ++             +H+  YE+ L     V   WS + +D  A LL  
Sbjct: 186  PVFAALEVDYSESDQDPTGQAFEELEKHLVYYELDLGLNHVVRK-WS-DPVDRTASLLFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDA---------DGS 266
            VP       GVL+  E+++ Y  +N  AF+  IP R   T+   R  +          G+
Sbjct: 244  VPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGATENPERKRSITAGVMHKMRGA 303

Query: 267  RYLL--GDHAGLLHLLV--ITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIGS 318
             + L   +   L  L +  +  +  ++TG    LKI+      +AS++  L +  +Y+ S
Sbjct: 304  FFFLIQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLYVAS 363

Query: 319  SYGDSQLIKLNLQPD--------------------------AKGSY-VEVLERYVNLGPI 351
              G+    +     D                           +G+  + ++E   +L P+
Sbjct: 364  EAGNHHFYQFEKLGDDDEEIEFTSEAFSADPSVPCDPIYFRPRGAENLNLVETINSLNPL 423

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
            +D  VV++      Q+ T SGA    S R +++G+ ++E    EL  +   +W+ + +  
Sbjct: 424  IDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRS 483

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D FD ++++SF + T +L++   + +EE    GF S   TL       + L+Q+    +R
Sbjct: 484  DEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIR 541

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQL 528
             + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q+
Sbjct: 542  HILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQM 599

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ +
Sbjct: 600  SGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSALNI 658

Query: 588  CAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
             +    S      YL   L  G  L  +L+  TGEL+D +   LG++ + L   S K  T
Sbjct: 659  MSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKAVKLFQVSVKGQT 718

Query: 642  HVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
             V   S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+
Sbjct: 719  AVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIE 778

Query: 700  DI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR----------L 748
             +   +  +SIPL   PRR     +   F +    N   +  +    +           +
Sbjct: 779  KLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKSRGGDETV 838

Query: 749  LDDQTFEF----------------------ISTYPLDTFEYGCSILSCSF-SDDSNVYYC 785
            L  + F +                      + T  L+  E   SI +  F S D   +  
Sbjct: 839  LPPEDFGYPRATGHWASCIQVVDPLDAKAVVHTIELEENEAAISIAAVPFTSQDDETFLV 898

Query: 786  VGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
            VGTA  +   N P    G I ++   EDG+ L+ I + + +    +L  F G+L+A I  
Sbjct: 899  VGTAKDM-SVNPPKSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLALLGFQGRLVAGIGS 957

Query: 842  KIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
             +++Y     D G ++L  +C        I+ L  QT+G  IVV D+ +S++ ++YK++E
Sbjct: 958  LLRIY-----DLGMKQLLRKCQAPVVPKTIVGL--QTQGSRIVVSDVRESVTYVVYKYQE 1010

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------E 947
              +     D  + W +A  ++D +   G +   NL+ +R   K SE A ++        E
Sbjct: 1011 NVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEEADEDGSGAHLIHE 1070

Query: 948  RG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
            RG       RLE++   +  +         LV        G    +++    G IG++  
Sbjct: 1071 RGYLQGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILVWTGFQGTIGMLVP 1123

Query: 1001 -LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  L 
Sbjct: 1124 FIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEMYFLLP 1178

Query: 1060 RTRMDEISKTMNVSVEELCKRVEEL 1084
                  I+  ++ SV E+ +++ ++
Sbjct: 1179 NDTKMMIAAELDRSVREIERKISDM 1203


>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
 gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
          Length = 1209

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 293/1222 (23%), Positives = 522/1222 (42%), Gaps = 163/1222 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++ A  +++ +H   P QG +Q +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPSQGKVQTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  ++++   +     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYIIIGSDSGRITIVEY-VPAQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
            Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYE 184

Query: 169  --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
              ++   +     + QD     + +T      YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRR-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       GVL+  E+ IVY  +N  AFK  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGVLVCAEDNIVYRHSNQDAFKVPIPRRRGPTENPERKRCITAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLH---LLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L    + ++  E EK TG    LK++      +AS++  L +  +++ 
Sbjct: 303  AFFFLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVA 362

Query: 318  SSYGD-----------------------SQLIKLNLQP----DAKGSYVEVLERYVNLGP 350
            S  G+                       S +I   L P          + ++E   +L P
Sbjct: 363  SETGNQHFYQFEKLGDDDDEIEFISDDYSAIISEPLPPVYFRPRPAENLNLVESIASLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++   + ++  +   Q+ T  G     S R +++G+ ++E    EL  +   +W+ + S 
Sbjct: 423  LMAASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  NDQFDAYIVLSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT+N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541  RHIHADQR--VNEWPAPQHRSIVAATSNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQ 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV- 585
            +   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657

Query: 586  LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L + S K  
Sbjct: 658  IMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
              V A S R  + YS    K    + +N   +     F+S    + +   +   L I +I
Sbjct: 718  RAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777

Query: 699  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEM------------ 743
            + +   L    IPL   PR      +   F +    N   S A ++++            
Sbjct: 778  EKLDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATKAKLLSESTTVNGDSA 837

Query: 744  --------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYY 784
                          H+   ++++D   T   +S+  L+  E   SI + SF S +   + 
Sbjct: 838  ELPPEGFGYPRGTNHWASSIQVVDPIHTKSVLSSLELEDNEAAVSIAAVSFTSQEDETFL 897

Query: 785  CVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VGT   ++      T G I ++   E+GK L+ I + + +    +L  F G+LLA I  
Sbjct: 898  VVGTGKDMVVSPRTFTCGFIHIYRFQEEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGP 957

Query: 842  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
             +++Y     D G R+L  +C       + + +QT+G  I+V D+ +S++ ++YK++E A
Sbjct: 958  DLRIY-----DLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA 1012

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEY 957
            +   A D    W +   ++D +   G +   N++ +R   K SE A ++  G   +    
Sbjct: 1013 LISFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQ 1072

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNGVIGV-IASLP 1002
            +L    NR    SLV+     D   IPT I  T              + G +G+ +  + 
Sbjct: 1073 YLQGAPNRL---SLVIHFYSQD---IPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFIT 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             +   F + L+  L      + G +H  +R +         K  +DGDL E+FL L   +
Sbjct: 1127 RDDVDFFQTLEMQLASQNPPLAGRDHLIYRGY-----YAPCKGVIDGDLCETFLLLPNDK 1181

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1182 KQAIAGELDRSVREIERKISDM 1203


>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
          Length = 1208

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 280/1232 (22%), Positives = 516/1232 (41%), Gaps = 178/1232 (14%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
            MS+  Y +T   P N+  S VG F+  +   + + K   +EI+ L  +   L+ +    +
Sbjct: 1    MSLHLYNLTLEDPQNINESIVGQFSGTKSQEIAVNKSNILEIYRLNLETIKLELIASSRL 60

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELI-TRAMGDVSDRIGRPTDN 117
            +  I +++ F+  G  +DF+ ++++  K  VL+   +   ++ +   G    R   P   
Sbjct: 61   FSIIRSIKAFKLTGSKKDFIVVSSDSGKLTVLELVGDKLVVLHSETYGKTGVRRIIP--- 117

Query: 118  GQIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLK-----------------EAFNIRL 158
            GQ    DP  R + +   D   L  ++  DN+  L                   A +   
Sbjct: 118  GQFLTCDPKGRSLMIASLDKSKLVYILNRDNQANLTISSPLEANRNNSITHHITAVDTGY 177

Query: 159  EELQ--VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA 216
            E  Q   L+  +      PT   L   NK    +  YE+ L     V+  WS+   D  A
Sbjct: 178  ENPQFAALETDYEEIDQDPTGEALINSNK---LITFYELDLGLNHVVK-KWSEPT-DPKA 232

Query: 217  DLLIPVP------------PPLCGVLIIGEETIV-YCSANAFKAIPIRPSITKAYGRVDA 263
            ++LI VP            P   GVLI   + ++ Y   +    +PI P  +       +
Sbjct: 233  NMLIQVPGGQSASTDTFDGP--SGVLICTVDYLIWYRPESESHRVPI-PKRSHPLENNTS 289

Query: 264  DGS--------------RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYL 309
            DG+               +LL    G L  L +    E V  L+I+       +++I+ L
Sbjct: 290  DGTIIISAVLHKMKGAFFFLLQSEQGDLFKLTMELNGEDVISLRIKYFDTIPPSNSINIL 349

Query: 310  -------------------------DNAVVYIGSSYGDSQLIKLN---------LQPDAK 335
                                     DN + Y  SSY ++ +  L            P   
Sbjct: 350  KSGYLFASSEFSNHNLYQFQKLGDDDNELEYSSSSYENNGMPSLENPLPIESAYFTPRGL 409

Query: 336  GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE 395
             + V V +   +L PI+D  V  +      Q+ T SG     SLR++R+G+ + E  S E
Sbjct: 410  DNLVPV-DEIQSLAPILDAKVQSIYAGDTPQIYTASGVGSRSSLRVMRHGLDVIEAVSSE 468

Query: 396  LQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH 454
            L     G+W+L+ +  D +D+ +V+SF++ T +L +   + +EE    G  +   TL   
Sbjct: 469  LPAPPNGIWTLKQNAQDMYDSLIVLSFVNGTLVLGIG--ESIEEVSDTGLATSVSTLSVD 526

Query: 455  DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
                + ++QV    +R + +  R   NEWKSP    +  +T N+ QV +A   G LVY E
Sbjct: 527  QLGEDSMIQVFPQGIRHILNDKR--VNEWKSPSDTYITASTTNSRQVCVALSNGELVYFE 584

Query: 515  I-GDGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LN 569
            +  +G L E +  + +E  ++ + I  + +        A+G   D ++RI SL P+  L 
Sbjct: 585  MDNEGQLNEFQERKSMESTVTTMSIGEVPQGRQRCPYLALGC-DDQTIRIVSLDPENTLE 643

Query: 570  LITKEHLGG--------EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 621
            +++ + +          EI+ +S  L  +    ++   L +G LL  +L+   G L D +
Sbjct: 644  VVSVQAVTAQPSSICVAEILDKS--LDKYNPTLFVNIGLANGVLLRTVLDTVNGSLADTR 701

Query: 622  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 681
               LG +P+ LR  +      V A S R  + Y+   ++ ++ +  + +  +  FN+   
Sbjct: 702  TRFLGAKPVVLRRVTVDKQQAVMALSTRTFLNYAHGDQMYFTPLLYEPLDQVSSFNAELC 761

Query: 682  PDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE 740
            PD L    +  L I T+ ++ Q++   S+ L   PR+I     +  F      +++ + E
Sbjct: 762  PDGLIGISDTVLRIFTLPNVGQRMKQDSVALSYTPRKILLHPTAPLFLTIESDHRTISRE 821

Query: 741  SEMHF-------------------------------VRLLDDQTFEFISTYPLDTFEYGC 769
             +                                  VR++D  T   ++   LD  E   
Sbjct: 822  RQAELLTSKGYNPEEHNFDAVQFGNVRMEAGNWASCVRMIDPVTLTTVNKVELDNNEAAF 881

Query: 770  SILSCSFS-DDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 825
            S     ++  +   +  VGTA    ++P+ ++    R+   + +D +L+L+ + +     
Sbjct: 882  SAAFVQWAGHEDETHLVVGTAKDRMMMPQSHKEAYLRVYK-VTQDSQLELLHKTDIDDVP 940

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGD 884
            Y+++AF G+LLA + + ++LY     D G + L  +C +      +  +   G  I VGD
Sbjct: 941  YAIHAFKGRLLAGVGKALRLY-----DLGKKRLLRKCENKSFAAGIVNLNVVGSRIYVGD 995

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEG 942
            + +S+S  +YK  E  +   A D  + W +    +D D   G +   N+F  R  K++  
Sbjct: 996  MQESVSFAVYKAPENRLLVFADDIMSRWTTTATPVDYDTVAGGDKFGNIFITRVDKSTSE 1055

Query: 943  ATDEER---GRLEVVGEYH----LGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNG 993
              DE+    G L   G YH      + +  F  G +V  +  S +  G    +++  ++G
Sbjct: 1056 WVDEDESGGGLLHARGLYHGAPNRSKLLAHFYVGDIVTSITKSQLSAGGRDVLVYTCLHG 1115

Query: 994  VIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +G+I     +  + F+  L+ ++R+    + G +H  +RS+      +  K F+DGDL 
Sbjct: 1116 TVGMIIPFASKDDIEFMSTLELHMRQESPSLVGRDHLGFRSY-----YIPCKAFVDGDLC 1170

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E +  L  T+   I+  ++ +  E+ K++E L
Sbjct: 1171 ELYASLPVTKQQAIANELDRTSGEVLKKIESL 1202


>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
            206040]
          Length = 1212

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 300/1232 (24%), Positives = 516/1232 (41%), Gaps = 180/1232 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PTNV  + +G F   +E  +I    +R+   LL P   Q     +L   
Sbjct: 6    NMFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGAGSRLA--LLRPDPSQGKVITLLSHD 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQW---DAESSELITRAMGDVSDRIGRP 114
            I+G I +L  FR  G  +D+L +AT+  +  ++++   +   S L     G    R   P
Sbjct: 64   IFGIIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPRENRFSRLHLETFGKSGVRRVIP 123

Query: 115  TDNGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL--- 169
               G+    DP  R  L+     + L  V+  +++ +L  +  +   +  VL I  +   
Sbjct: 124  ---GEYLACDPKGRACLVASIEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALD 180

Query: 170  YGCAKPTIVVLYQD----NKDA-----RHVKT----YEVALKDKDFVEGPWSQNNLDNGA 216
             G A P    L  D    ++D+     R ++T    YE+ L     V   WS+  +D+ A
Sbjct: 181  VGYANPVFAALEIDYTEVDQDSTGEALRELETQLVYYELDLGLNHVVR-KWSEP-VDSTA 238

Query: 217  DLLIPVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGS 266
             LL  VP     P   GVL+ GEE I Y  +N  AF+  IP R   T+  +  R    G 
Sbjct: 239  SLLFQVPGGNDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRTIVSGV 296

Query: 267  RYLLGDHAGLLHLLVITH--------------EKEKVTG----LKIELLGETSIASTISY 308
             + L   AG    L+ T               E+   TG    LKI+       AS +  
Sbjct: 297  MHKLKGSAGAFFFLLQTEDGDMFKVTIDMVEDEEGNTTGEVRRLKIKYFDTVPAASNLCI 356

Query: 309  LDNAVVYIGSSYGD---SQLIKL------------NLQPDAKGSYVEV------------ 341
            L +  +Y+ S +G+    Q  KL            +   DA+ SY  V            
Sbjct: 357  LKSGFLYVASQFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYTPVYFYPRPLENLVL 416

Query: 342  LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-K 400
            +E   ++ P++D  + +L  +   Q+ T  G     + R +++G+ INE  S EL GI  
Sbjct: 417  VESIPSMNPLLDCKIANLTGEDAPQIYTVCGNGARSTFRTLKHGLEINEIVSSELPGIPS 476

Query: 401  GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 460
             +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       + 
Sbjct: 477  AVWTLKLNRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDDG 534

Query: 461  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGI 519
            L+QV    +R + +      N+W +P   S+  A+ NA QV +A   G +VY E+  DG 
Sbjct: 535  LIQVHPKGIRHIRNGQV---NQWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDDDGS 591

Query: 520  LTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLG 577
            L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K    
Sbjct: 592  LAEYDDKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQA 650

Query: 578  GEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
                P S+ + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + + 
Sbjct: 651  LTAAPTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVR 710

Query: 632  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            L   + +  T V   S RP + Y+    K  + + ++  ++     F S    + +   +
Sbjct: 711  LFQVTVQGRTCVLGLSSRPWLGYADPITKSFVVTPLSYVDLEWGWNFTSEQCEEGIVGIQ 770

Query: 690  EGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV-- 746
               L I ++D +    I+ SIPL   P+++    +   F +    N + + +     +  
Sbjct: 771  GQTLRIFSVDRLGDTLIQNSIPLTYTPKKMVKHPEHPLFYVIEADNHTLSPDLCAKLLAD 830

Query: 747  --------RLLDDQTF-----------------------EFISTYPLDTFEYGCSILSCS 775
                    ++L  + F                       + +    LD  E   S+   +
Sbjct: 831  PARVNGDAKVLSPEEFGHPRGNRRWASCISVVDPLAEDGQALQKIDLDENEAAVSLAIVT 890

Query: 776  F-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 831
            F S D+  +  VGT     V P         I  F  E   L  I + + +    ++  F
Sbjct: 891  FASQDNETFLVVGTGKDMVVNPRSFSDAYVHIYRFEQEGRGLVFIHKTKVEEPPMAIIPF 950

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
             G++L  I + +++Y   +R    R+ Q+E       L   + T+G+ I+VGD+ + I+ 
Sbjct: 951  QGRVLVGIGKILRIYDLGMR-QLLRKTQAEVAPQ---LINSLSTQGNRIIVGDVQQGITY 1006

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 948
            ++YK     +     D  A W +   ++D +   G +   N+F VR   K SE A +E+ 
Sbjct: 1007 VVYKQTTNKLIPFVDDTVARWTTCSTMVDYETVAGGDKFGNIFVVRSPQKASEEADEEQA 1066

Query: 949  G---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
            G               RL+++   +  +        SLV       VG    +++  + G
Sbjct: 1067 GLHLLNARDYLHGRSHRLDLMCHLYTQDIPTSITKTSLV-------VGGQDVLLWSGLMG 1119

Query: 994  VIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IGV I  +  E   F + L+ +LR     + G +H  +RS+    K V     +DGDL 
Sbjct: 1120 TIGVLIPFVTREDTDFFQSLELHLRAEDPPLAGRDHLMYRSYYAPVKGV-----IDGDLC 1174

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1175 ERYTLLPNDKKQMIAAELDRSVREIERKISDI 1206


>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
          Length = 1215

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 275/1237 (22%), Positives = 513/1237 (41%), Gaps = 183/1237 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
            ++ Y +T  + T +  +  GNF+  ++  ++IA+   +EI    P    +  +L   ++G
Sbjct: 1    MYLYNLTLQRATGIIQAVQGNFSGTKQQEIVIARGKVLEIVKPDPNTGKVHTLLSQEVFG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I ++  FR  G  +D+L + ++  +  +L+++A +  +  +   +   + G R    GQ
Sbjct: 61   IIRSIISFRLTGGNKDYLVVGSDSGRIVILEYNA-AKNVFDKVHQETYGKSGCRRIVPGQ 119

Query: 120  IGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               IDP  R + +   +   L  ++  D +  L  +  +   +   L    +    G   
Sbjct: 120  YMAIDPKGRAVMISAIEKQKLVYILNRDAQAHLTISSPLEAHKSNTLVYNIVGVDVGFEN 179

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
            P    L  D ++A    T E A K +    F E     N+        LD  A+ LI VP
Sbjct: 180  PVFACLEMDYEEADGDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLDEHANFLITVP 239

Query: 224  ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                   GVL+  E  I Y   N  +   IR  I +    +D D  R             
Sbjct: 240  GGNDGPSGVLVCSENYITY--KNLGEQHDIRCPIPRRRNDLD-DPERGMIFVCSASHRTK 296

Query: 268  ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
                +L+    G +  + +  ++E V  LKI+      ++S++  L    +++ S +G+ 
Sbjct: 297  AMFFFLVQTEQGDIFKITMDMDEEVVRELKIKYFDTVPVSSSMCVLKTGFLFVASEFGNH 356

Query: 324  QLIKL------NLQPDAKGSY-----------------VEVLERYVNLGPIVDFCVVDLE 360
             L ++      + +P+   +                  + +++   +L P++   + DL 
Sbjct: 357  YLYQIAHLGDDDDEPEFSSTIPLEEGDTFFFAPRPLKNLVLVDEMESLSPVLACHIADLA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   DD FD ++VV
Sbjct: 417  NEDTPQLYALCGRSSRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRKRADDEFDAYIVV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     N L+QV    +R + +  R  
Sbjct: 477  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCSSLGDNALLQVYPEGIRHIRADRR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWKSP   +++    N  QV+++  GG LVY E+   G L E  +  ++  E+ C+ +
Sbjct: 533  INEWKSPGKRAISRCAVNQRQVVISLAGGELVYFEMDPTGQLNEYTERKEMTAEVVCMAL 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE----- 591
              +      S+  AVG+  D +VR+ SL   + +T   L  + +P +   LC  E     
Sbjct: 593  ANVPSGEQRSRFLAVGL-ADNTVRVISLDPNDCLTP--LSMQALPATPESLCIVEMGGHD 649

Query: 592  ---------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
                     G  +L   L +G LL  +L+  TG+L D +   LG++P+ L    ++N   
Sbjct: 650  KDSETTGTSGQLFLNIGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRVMTQNHEA 709

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ 702
            V A S R  + Y    +   + ++   +     F S   P+ +       L I  ++ + 
Sbjct: 710  VLAISSRTWLSYYFQNRFHLAPLSYDSLEFASGFASEQCPEGVVAIASNTLRILALEKLG 769

Query: 703  KLHIR-SIPLGEHPRRICHQEQSRTFAICS--------------------LKNQSCAEES 741
             +  + S PL   PR+    +  R   I +                    +++ +  EE 
Sbjct: 770  AVFNQVSYPLEYTPRKFVVHDSGRMIIIETDHNAYTLETKLERRQQIAQEMRDAATEEEQ 829

Query: 742  EM-----------------------------HFVRLLDDQTFEFISTYPLDTFEYGCSIL 772
            E+                               VR++D  +   + T  L   E   SI 
Sbjct: 830  ELAHQMADAFLNEDLPESDFGAPKAGAGMWASIVRIMDPTSGNSLHTIRLPQNEAALSIG 889

Query: 773  SCSF--SDDSNVYYCVGTAYVLPEENEPTKGRILV---FIVEDGKLQLIAEKETKGAVYS 827
               F   D  + +  VG A  L    +   G  +     I E   L+ + +   +   Y+
Sbjct: 890  LARFMNQDPEDYFVLVGVAKDLKLNPKQCDGGFIYTYKLINEWSALEFVHKTPVEDTPYA 949

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLM 886
            + A+ G++L  + + ++LY     D G ++L  +C   H     + +Q  G  + V D+ 
Sbjct: 950  ICAYQGRVLIGVGRLLRLY-----DMGKKKLLRKCENKHLPSCVVNIQALGQRVYVADVQ 1004

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 946
            +SI  + YK  E  +   A D +  +++ + +LD D    A+   N+  +R  S  + D 
Sbjct: 1005 ESIHFVRYKRMENQLIIFADDTHPRYVTTMCLLDYDTVAVADKFGNISVLRLPSRTSDDV 1064

Query: 947  -----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
                       +RG L       EV+   H+GE     +  +L+        G   ++++
Sbjct: 1065 DEDPTGNKSFWDRGVLNGASNKAEVLCNIHIGETALSLQRATLI-------PGGSESLVY 1117

Query: 989  GTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
             T++G IGV+      E + F + L+ +LR     + G +H  +RSF         KN +
Sbjct: 1118 TTLSGSIGVLVPFTSREDHDFFQALEMHLRSEHPPLCGRDHLAFRSF-----YFPVKNVI 1172

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E F  +  ++   ++  ++ +  E+ K++E++
Sbjct: 1173 DGDLCEQFNSIDSSKQKAVADDLDRAPNEVSKKLEDI 1209


>gi|225560964|gb|EEH09245.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus G186AR]
          Length = 1209

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 283/1232 (22%), Positives = 513/1232 (41%), Gaps = 183/1232 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P    ++ +    ++
Sbjct: 6    SLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTHGKIRTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I  L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRALAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +   + Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYD 184

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  +  +A             +H+  YE+ L     V   WS + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEADQDPTGQAYEELEKHLVYYELDLGLNHVVRK-WS-DPVDRSASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       G L+  E+ I Y  +N  AF+  IP R   T+     + +  RY+    A
Sbjct: 243  QVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---A 294

Query: 275  GLLH---------------------LLVITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H                     L ++  +  ++TG    LK++      IAS++  L
Sbjct: 295  GVMHKMRGAFFFLLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKL-------------------NLQPDAKGSY--------VEVL 342
             +  +++ S  G+    +                    +L      +Y        V ++
Sbjct: 355  KSGFLFVASETGNHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  +   
Sbjct: 415  ESIDSLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTREDEFDAYIILSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSL 590

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E    + +   ++CL +  +    + S   AVG   D +VRI SL P+  L  K     
Sbjct: 591  AEYDEKRAMSGTVTCLSLGEVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKSVQAL 649

Query: 579  EIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L
Sbjct: 650  TSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
               S K  T V A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FQVSVKEQTAVLALSSRPWLGYSHLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQG 769

Query: 691  GELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLL 749
              L I +++ ++  L   +IPL   PR      +   F +   +N   +  +     +LL
Sbjct: 770  QNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEYPLFYVIEAENNILSPGTR---TKLL 826

Query: 750  DDQTFEFISTYPLDTFEYG-----------------------------------CSILSC 774
            +D       T PL   E+G                                    S+ + 
Sbjct: 827  NDSDAVNGDTTPLPPEEFGYPRGTGHWASCIQIVDPINSKRVISQIELEENEAAVSVAAV 886

Query: 775  SFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 830
             FS  D   +  VGT   ++      T G I ++   E+GK L+ I + + +    +L  
Sbjct: 887  PFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQEEGKELEFIHKTKVEQPPMALLG 946

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
            F G+LLA I   +++Y   ++    R+ Q+    H   L + +QT+G  I+V D+ +S++
Sbjct: 947  FQGRLLAGIGTDLRIYDLGMK-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESLT 1002

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 947
             ++YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++ 
Sbjct: 1003 YVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDG 1062

Query: 948  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
             G               RL +V  ++  +     +   LV    D  V    T + GTV+
Sbjct: 1063 SGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVW---TGLQGTVS 1119

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +I  I+    E+  F + L+  L      + G +H  +RS+        AK  +DGDL 
Sbjct: 1120 MLIPFIS---REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E++L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1172 ETYLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
 gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
          Length = 1226

 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 296/1219 (24%), Positives = 504/1219 (41%), Gaps = 165/1219 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVIPLYTQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I TL  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRTLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVVPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLD---IKFLYGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L    +    G   
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVYSVVALDAGYEN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  ++    T             YE+ L     V   W+ + +D  + +L  
Sbjct: 186  PVFAALEVDYSESDQDPTGRAYEEVEKLLVYYELDLGLNHVVR-KWT-DPVDRTSSMLFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPS----------ITKAYGRVDADG 265
            VP       GVL+  E+ I Y  +N  AF+  IP R            IT          
Sbjct: 244  VPGGADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRKGAMENPERKRCITAGVMHKMRGA 303

Query: 266  SRYLLGDHAG-LLHLLVITHEKEK------VTGLKIELLGETSIASTISYLDNAVVYIGS 318
              +LL    G L  L +   E +K      V GLKI+      +AS++  L +  +Y+ +
Sbjct: 304  FFFLLQTEDGDLFKLTLDMVEDDKGQLTGEVKGLKIKYFDTVPLASSLLILKSGFLYVAA 363

Query: 319  SYGDSQLIKL-----------------NLQPDAKGSYV----------EVLERYVNLGPI 351
              G+    +                  +  P A  + V           ++E   +L P+
Sbjct: 364  EGGNHHFYQFEKLGDDDEETEFNSDDFSADPAAPCTPVYFQPRGAENLNLVEAINSLNPL 423

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
            VD  VV++      Q+ T SG     + R +++G+ ++E    EL  +   +W+ + +  
Sbjct: 424  VDSKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRA 483

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+Q+    +R
Sbjct: 484  DEFDAYIVLSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIR 541

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQL 528
             + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q+
Sbjct: 542  HILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDADGSLAEYDERRQM 599

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ +
Sbjct: 600  SGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDTTLENKSVQALTAAPSALNI 658

Query: 588  CAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
             A    S      YL   L  G  L   L+  TGEL+D +   LG++ + L   S    T
Sbjct: 659  IAMADSSSGGTTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQT 718

Query: 642  HVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
             V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+
Sbjct: 719  AVLALSSRPWLGYSDTQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIE 778

Query: 700  DI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFIS 758
             +   +  +SIPL   PR      +   F +    N   +  +     RLL+D       
Sbjct: 779  KLDNNMLQQSIPLAYTPRHFIKHPEEPLFYVIEADNNVLSPATR---ARLLEDSKARGGD 835

Query: 759  T---------YP--------------------------LDTFEYGCSILSCSF-SDDSNV 782
            T         YP                          L+  E   SI +  F S D   
Sbjct: 836  TTVLPPEDFGYPRGTGHWASCIQIIDPLDAKAVVGAVELEENEAAVSIAAVPFTSQDDET 895

Query: 783  YYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
            +  VGTA  +   N P+   G I ++   EDGK L+ I + + +    +L  F G+LLA 
Sbjct: 896  FLVVGTAKDM-TVNPPSSAGGYIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAG 954

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHE 897
            +   +++Y     D G ++L  +C       A+  +QT+G  IVV D+ +S++ ++YK++
Sbjct: 955  VGSVLRIY-----DLGMKQLLRKCQAAVAPKAIVGLQTQGSRIVVSDVRESVTYVVYKYQ 1009

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVV 954
            +  +     D  A W +A  ++D +   G +   NL+ VR   K SE A +E  G   + 
Sbjct: 1010 DNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWLVRCPKKASEEADEEGSGAHLIH 1069

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQIPTVIFGTVNGVIGVIAS-LP 1002
               +L    NR     L++ +   D+           G    +++    G IG++   + 
Sbjct: 1070 DRGYLQGTPNRLE---LMIHVFTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGILVPFVS 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L+  L      + G +H  +RS+    K V     +DGDL E +  LS   
Sbjct: 1127 REDVDFFQSLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDGDLCEQYFLLSNDT 1181

Query: 1063 MDEISKTMNVSVEELCKRV 1081
               I+  ++ SV E+ +++
Sbjct: 1182 KMMIAAELDRSVREIERKI 1200


>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
          Length = 1212

 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 294/1228 (23%), Positives = 504/1228 (41%), Gaps = 190/1228 (15%)

Query: 14   TNVTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQ--GLQPMLDVPIYGRIATLELFRP 70
            +++T +CVGNF+  ++  + +A+   RIE+     Q   L+ +++  ++G+I +L  F+ 
Sbjct: 13   SSITCACVGNFSGTKQQEICVARGGQRIELLRTDAQTGKLESIVEADVFGQIRSLTAFKL 72

Query: 71   HGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIIDPDCR- 128
             G ++D++ I ++  +  VL++D  ++ +  +   +   R G R    GQ    DP  R 
Sbjct: 73   TGGSKDYIIIGSDSGRIVVLEYDPNNN-VFNKLHQETYGRSGSRRIVPGQYLATDPKGRA 131

Query: 129  -LIGLHLYDGLFKVIPFDNKGQLK-----EAFNIR--LEELQVLDIKFLYGCAKPTIVVL 180
             +IG      L  ++  D    L      EA   R  +  +  +D+ F      P    L
Sbjct: 132  VMIGAMEKSKLVYILNRDAAANLTISSPLEAHKPRAIIHSIVGVDVGF----ENPMFAAL 187

Query: 181  YQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP---- 223
              D  +A    T             YE+ L     V   WS+   D  A+LL+ VP    
Sbjct: 188  EVDYTEADQDPTGAAFDAAEKMLTYYELDLGLNHVVRK-WSEAT-DPRANLLVQVPGGQN 245

Query: 224  --------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------ITKAYGRVD 262
                    P   GVL+  E+ I+Y    A +    IP R            IT A     
Sbjct: 246  ATMDRFDGP--SGVLVCCEDYIIYKHQGAKEHRVPIPKRAHPLADPERGVIITAAVMHKM 303

Query: 263  ADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +LL    G L  + I HE+E+VT LKI+       AS++  L +  +++ + +G+
Sbjct: 304  KGAFFFLLQSEEGDLFKVTIEHEEEEVTALKIKYFDTVPSASSLCILKSGFLFVATEFGN 363

Query: 323  SQLIKLNLQPDAKGSYVEVLERYVNLG-----------------------------PIVD 353
             +L +     D           Y NLG                             PI+D
Sbjct: 364  PRLYQFEKLGDDDDETEFSSTDYDNLGAGTDPLPPALFRPRELQNLAIADEVESLAPILD 423

Query: 354  FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS--LRSSTD 410
              V +   +   Q+    G     SLRI+R G+ + E  S EL G    +W+  LR+   
Sbjct: 424  AKVANYLGEDTPQIYAACGRGARSSLRILRQGLEVMEAVSSELPGAPIAVWTTKLRAEGA 483

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
              +D ++++SF++ T +LA+   D +EE    GF S   TL       + L+Q+    +R
Sbjct: 484  SSYDAYIILSFVNGTLVLAIG--DTIEEVSDTGFISSAPTLGVQQLGDDALLQIYPRGIR 541

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ-L 528
             + +  R   NEWK     ++  AT N+ QV++    G LVY E+  DG L E +  + +
Sbjct: 542  HILADKR--VNEWKVGARETIVCATTNSRQVVIGLSTGELVYFELDMDGQLNEFQERKPM 599

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLC 588
              EI  L I  + E    +   AVG   D +VRI SL   N +    L     P S ++ 
Sbjct: 600  GAEILALSIAEVPEGRQRTPYLAVGC-ADSTVRIISLDPENTLDSLSLQALTAPPSSIVM 658

Query: 589  A---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
            A         +    ++   L +G LL  +L+  TG L D +   LG++P+ L     + 
Sbjct: 659  AEITDASIDKYHATMFVNIGLNNGVLLRTVLDPLTGSLGDTRTRFLGSRPVKLARVPVQG 718

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
            +  + A S RP + Y+    L ++ +    + +   F++   P+ L       L I T  
Sbjct: 719  SPAILALSSRPWLNYAYRGILQFTPLIFDALDYAWSFSAELCPEGLIGIVGNSLRIFTFP 778

Query: 700  DI-QKLHIRSIPLGEHPRRICHQEQS----------RTFAICSL-KNQSCAEESEMHF-- 745
             + QK+    I L   PR++     S          RTF+  ++ K  S    +EM    
Sbjct: 779  RLGQKVQQTVIDLSYTPRQLLTSPHSRLLYTVEADHRTFSPSAIQKTISDMRMAEMEVDE 838

Query: 746  -----------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN- 781
                                   VR++D  T E +    L+  E   S    +F    N 
Sbjct: 839  EVLNLDPKEFGLPRGPAGQWASCVRVIDPVTAETVFKVDLEQNEAAFSAAIVTFHSHPNE 898

Query: 782  VYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
            V+  VGT     + P   +         + E  +L+L+ + E      +L AF G+L+A 
Sbjct: 899  VFLVVGTGQDTSLAPRACKQAYLHTYKLLEEGRQLELLHKTEVDDIPKALIAFQGRLVAG 958

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGH-ILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            + + ++LY     D G ++L  +  + G   + + + T+G  I+VGD  +S+   +YK  
Sbjct: 959  VGKALRLY-----DLGKKKLLRKAENKGFATMIMTLNTQGTRIIVGDAQESVYYALYKAP 1013

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT----DEERG---- 949
            E  +   A D +  W +A  I+ D   + A + F  F V +  +G +    D+  G    
Sbjct: 1014 ENRLLIFADDISPRWTTA-SIMVDYETVAAGDKFGNFFVNRLPKGVSSDVDDDPTGAGIM 1072

Query: 950  -----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
                       R  ++  YH+G+ +      +LV        G    +++  + G +GV+
Sbjct: 1073 HEKPYLMGAPHRTHLLAHYHIGDIITSLHKVALV-------AGGRDLLVYTGLMGTVGVL 1125

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS-FNNEKKTVDAKNFLDGDLIESFL 1056
               + +E   F   L+ +LR     + G  H  +RS +   K TV      DGDL E + 
Sbjct: 1126 VPFVSNEDVDFFTTLEMHLRSEAPSLCGREHLAYRSAYTPVKATV------DGDLCEVYR 1179

Query: 1057 DLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             L   +  +I+  +  +V E+ K+++ +
Sbjct: 1180 SLPMAKQGQIAGELERTVSEVIKKLDNV 1207


>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 1225

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 281/1255 (22%), Positives = 521/1255 (41%), Gaps = 208/1255 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQE---LNLIIAKCTRIEIHLLTPQG---LQPMLDV 56
            ++ Y +T  +PT +  +  GNF+   +     +++A+   +E  LL P     +Q +L V
Sbjct: 1    MYLYNLTLQRPTGIVCAINGNFSGSDDGITQEIVVARGKVLE--LLRPDKFGRIQSILSV 58

Query: 57   PIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGR 113
             ++G I +L  FR  G  +DF+ + ++  +  +L ++ + +   ++     G    R   
Sbjct: 59   QVFGTIRSLSQFRLTGAQKDFIVVGSDSGRIVILDYNKQKNVFDKIHQETFGKSGCRRIV 118

Query: 114  PTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY--- 170
            P   GQ   IDP  R + +   +    V   +     +   +  LE  +   I F     
Sbjct: 119  P---GQYLAIDPKGRAVMIAACEKKKLVYVLNRDSLARLTISSPLEANKSHTIVFSICAV 175

Query: 171  --GCAKPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNG 215
              G   P    +  D  DA             +H+  YE+ L   + V   WS + +DNG
Sbjct: 176  DCGFENPIFAAIELDCSDADQDATGVAASQAQKHLIFYELDLG-LNHVSRKWS-DQVDNG 233

Query: 216  ADLLIPVPPPL---CGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSRY- 268
            A++L+ VP       GVL+  E  ++Y +    +    IP R  +    G +    + + 
Sbjct: 234  ANMLVTVPGGADGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHK 293

Query: 269  --------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
                          L  ++  +  + +     ++V+ L I+     ++A +I  L +  +
Sbjct: 294  TKNLKPEEFKLFFLLQTEYGDIFKVTLTDGGGDRVSELNIKYFDTIAVAVSICVLKSGFL 353

Query: 315  YIGSSYGDSQLIKLN---------------------------LQPDAKGSYVEVLERYVN 347
            +  S +G+  L +                              QP    + V + ++  +
Sbjct: 354  FAASEFGNHALYQFKGIGDDDNDVGASSASLMETEEGFQPVFFQPRRLKNLVRI-DQVES 412

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR 406
            L P++D  V +L  +   Q+ T  G     SLRI+R G+ ++E A  +L GI   +W+++
Sbjct: 413  LMPVMDMKVSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEMAVSKLPGIPSAVWTVK 472

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             +  D FD ++VVSF + T +L++   +  +E    GF     +L       + L+QV  
Sbjct: 473  KNVMDEFDAYIVVSFTNATLVLSIG--ETADEVSDSGFLDTAPSLAVSLIGDDSLMQVHP 530

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKH 525
              +R +    R   NEW++    ++    +N  QV++A  GG L+Y E+   G L EV+ 
Sbjct: 531  NGIRHIREDGRT--NEWQTSGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVER 588

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
             ++  +++CLDI P+ +    S+  AVG + D ++RI SL PD  + T         P S
Sbjct: 589  HEMSGDVACLDIAPVPKGRLRSRFLAVGSY-DKTIRILSLDPDDCMQTLGIQSLSSAPES 647

Query: 585  VLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
            +L    +               +L   L +G L   +++M TG L+D +   LG +   L
Sbjct: 648  LLFLEVQASVGGEDGADHPASLFLNAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLKAPKL 707

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS-AAFPDSLAIAKEG 691
                 +    +   S RP + Y      L + ++ + + +   F+S   F   +++A E 
Sbjct: 708  FPIIVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCFEGVVSVASEA 767

Query: 692  ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-------------------- 730
             L I T++ + +  +   IPL   PR+   Q + +   +                     
Sbjct: 768  -LRIFTVERLGETFNQNVIPLRYTPRKFVLQPKRKLLVVIESDQGALTAEEREAARKECF 826

Query: 731  ----SLKNQSCAEE---------------SEMHF-------------VRLLDDQTFEFIS 758
                + +N++ +E+               S+ H+             +R+LD +T     
Sbjct: 827  EAAHAGENKTGSEDQMENGGEDEDNDDSLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTC 886

Query: 759  TYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL--PEENEPTKGRILVF-IVEDGK-L 813
               L   E   SI + +F D +      VGTA  L    +   T G I ++  ++DG+ L
Sbjct: 887  LLELQENEAAFSICTVNFHDKEYGTLLAVGTAKGLQFTPKRSLTAGFIHIYRFLDDGRSL 946

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY- 872
            +L+ + + +G   +L  F G+LLA I   ++LY     D G R L  +C +     ++  
Sbjct: 947  ELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKRRLLRKCENKSFPSSIVS 1001

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            +    D I VG + +S     Y+ +E  +   A D    W+++   +D D   GA+   N
Sbjct: 1002 IHAYRDRIYVGGIQESFHYCKYRRDENQLYIFADDSVPRWLTSSYHIDFDTMAGADKFGN 1061

Query: 933  LFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            +F  R                  K  +G  +    ++E + ++H+G+ +   +  SLV  
Sbjct: 1062 IFFARLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVITSLQKASLV-- 1119

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
                  G    +++GTV G +G + A    +   F   L+ ++R+    + G +H  +RS
Sbjct: 1120 -----PGGGECIVYGTVMGSVGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS 1174

Query: 1034 FNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                      K+ +DGDL E F    +DL R   DE+ +T      E+ K++EE+
Sbjct: 1175 -----AYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG----EILKKLEEV 1220


>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
          Length = 1217

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 284/1242 (22%), Positives = 527/1242 (42%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T +T +  GNF+  +   +I+++   +E+    P    + P+L V ++G I 
Sbjct: 4    YNLTLQRATGITCAVHGNFSGSKLQEIIVSRGKILELLRHDPNTGKIYPVLSVEVFGMIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G ++D++ + ++  +  +L++ A+ + +  +   +   + G R    GQ   
Sbjct: 64   SLMPFRLTGGSKDYVVVGSDSGRIVILEYIAQKN-IFEKVHQETFGKSGCRRIVPGQYLA 122

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G   PT 
Sbjct: 123  VDPKGRAVMIGAVEKQKLVYILNRDASARLTISSPLEAHKANTLVYHMVGVDVGFENPTF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKDF------------VEGPWSQNNLDNGADLLIPVP-- 223
              L  D ++A    T E A   +              V   +S++ L+  A+ LI VP  
Sbjct: 183  ACLEIDYEEADMDHTGEGAKNTQQLLTYYELDLGLNHVVRKYSES-LEEHANFLISVPGG 241

Query: 224  -PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------------- 267
                 GVLI  E  I Y   N      IR  I +    +D D  R               
Sbjct: 242  SDGPSGVLICSENYITY--KNLGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKSM 298

Query: 268  --YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
              +L     G +  + +  +++ VT + ++      +A+ +  L +  ++I S +G+  L
Sbjct: 299  FFFLAQTEQGDIFKITLETDEDMVTEIILKYFDTVPVAANMCVLKSGFLFIASEFGNHYL 358

Query: 326  IKLNLQPD-------AKGSYVEVLERYV----------------NLGPIVDFCVVDLERQ 362
             ++    D       +  S +E  E +                 +L PI    + DL  +
Sbjct: 359  YQIAQLGDDDEEPRFSSASQLEEGEPHFFSPRPLKNLVQVDEMDSLSPITHCQIADLANE 418

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
               Q+ T  G     +LR++R+G+ ++E A  EL G    +W+++ + DD FD +++VSF
Sbjct: 419  DTPQLYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIDDEFDAYIIVSF 478

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            ++ T +L++   + +EE    GF   T TL C     + LVQ+    +R + S  R   N
Sbjct: 479  VNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRSDKR--VN 534

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDIN- 538
            EWK+P   S+     N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  
Sbjct: 535  EWKTPGKKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSSEVVCMALGR 594

Query: 539  -PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR-SVLLCAFE----- 591
             P+GE     +  AVG+ +D +VRI SL   + ++   L  + +P  S  LC  E     
Sbjct: 595  VPVGEQ--RCRFLAVGL-SDNTVRIISLDPSDCLSP--LSMQALPEPSESLCIVEMGGTE 649

Query: 592  -----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       G  +L   L +G LL  +L+  TG+L+D +   LG +P+ L   S + +
Sbjct: 650  AKEETGEPGTVGGLFLNIGLQNGVLLRTVLDNVTGDLSDTRTRYLGVRPVKLFRISMQGS 709

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S R  + Y+   +   + ++ + + +   F S   P+ +       L I  ++ 
Sbjct: 710  EAVLAMSSRSWLSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEK 769

Query: 701  IQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKN--------------------QSCA 738
            +  +  + S PL   PR+ + H E +    I +  N                       A
Sbjct: 770  LGAVFNQVSHPLQHTPRKFVIHPETNNLIVIETEYNAYTEATKMERKQQMAEEMVEMVSA 829

Query: 739  EESEM-----------------------------HFVRLLDDQTFEFISTYPLDTFEYGC 769
            EE EM                               +R+++  +   +    L+  E   
Sbjct: 830  EEREMAAEMAANFLNEERSESIFGAPKAGPGMWASIIRIINPISGNTLEKIQLEQNESVH 889

Query: 770  SILSCSFS---DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGA 824
            SI    F+   DD  V   V    VL      T G + ++ +EDG   L+L+ +   +  
Sbjct: 890  SIALLKFASRGDDQFVLVGVARDLVL-NPRSLTGGFLYLYQLEDGGESLKLLHKTPVEDV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG---HILALYVQTRGDFIV 881
              ++ +F G++L  + + +++Y     D G +++  +C +     ++ A++  T G+ I+
Sbjct: 949  PGAIASFQGRVLIGVGRYLRIY-----DIGKKKMLRKCENKSIPNYVSAIH--TVGNRII 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 941
              D+  S   + YK +E  +   A D N  W++A   LD +   GA+   N+  +R   +
Sbjct: 1002 ASDVQDSFHFVRYKRQENQLIVFADDTNPRWITASCSLDYNTVAGADKFGNITIIRLPGD 1061

Query: 942  GATDE-----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
             + D            +RG L       +V+  +HLGE V   +  +L+        G  
Sbjct: 1062 VSDDVDEDPTGNKALWDRGLLNGASQKADVMMNFHLGEMVTSLQKATLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG+ +A   HE + F + L+  +R     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGMLVAFTSHEDHDFFQHLEMYMRTEHPPLCGRDHLSFRSY-----YYP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEMFNSMDPVKQKSVSEELDRTPSEVSKKLEDI 1211


>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
          Length = 1209

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 294/1222 (24%), Positives = 517/1222 (42%), Gaps = 163/1222 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT VT + +G F+  +E  ++ A  +R+ +    P QG +  +L   I+
Sbjct: 6    NMFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G +  +  FR  G  +D++ +AT+  +  ++++  ++++     +        R    GQ
Sbjct: 66   GIVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  LI     + L  V+  +++ +L  +  +   +  VL +  +    G A 
Sbjct: 126  YLAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  DA    T             YE+ L     V   WS + +D  + LL  
Sbjct: 186  PVFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRK-WS-DTVDRTSSLLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLG 271
            VP     P   GVL+ GEE + Y  +N  AF+  IP R   T+     RV   G  + L 
Sbjct: 244  VPGGNDGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVSGVMHKLK 301

Query: 272  DHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAV 313
              AG    L+ T + +                  +V  LKI+      +A+++  L +  
Sbjct: 302  GSAGAFFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGF 361

Query: 314  VYIGSSYGDSQLIKL---------------NLQPDAKGSYVEV------LERYV------ 346
            ++  S +G+    +                +   D   SY  V      LE  V      
Sbjct: 362  LFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESID 421

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G    +W+ 
Sbjct: 422  SMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTT 481

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            + +  D +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV 
Sbjct: 482  KLTKYDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVH 539

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV- 523
               +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG L E  
Sbjct: 540  PKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYD 596

Query: 524  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
            +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P
Sbjct: 597  EKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQALTAAP 655

Query: 583  RSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
             ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  L   S 
Sbjct: 656  SALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTRLFQVSV 715

Query: 638  KNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +       L I
Sbjct: 716  QDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRI 775

Query: 696  GTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEESEMHFV 746
             +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+      
Sbjct: 776  FSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQQSNGDA 835

Query: 747  RLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF-SDDSNV 782
             +L  + F +                IS  P       LD  E   S     F S +   
Sbjct: 836  TVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFASQEGES 895

Query: 783  YYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G+LLA +
Sbjct: 896  FLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQGRLLAGV 955

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
             + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++YK E  
Sbjct: 956  GKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVVYKAEGN 1011

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
             +   A D    W +   ++D +   G +   N++ VR     + + +    E   E HL
Sbjct: 1012 RLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EPGSEIHL 1067

Query: 960  GEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV-IASLP 1002
                N + HG+              LP S       VG    +++  + G +GV I  + 
Sbjct: 1068 MHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGVFIPFVS 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F  L   +
Sbjct: 1127 REDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFSLLPNDK 1181

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1182 KQMIAGELDRSVREIERKISDI 1203


>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 1225

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 284/1253 (22%), Positives = 520/1253 (41%), Gaps = 204/1253 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQE---LNLIIAKCTRIEIHLLTPQG---LQPMLDV 56
            ++ Y +T  +PT +  +  GNF+   +     +++A+   +E  LL P     +Q +L V
Sbjct: 1    MYLYNLTLQRPTGIVCAINGNFSGSDDGITQEIVVARGKVLE--LLRPDKFGRIQSILSV 58

Query: 57   PIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPT 115
             ++G I +L  FR  G  +DF+ + ++  +  +L ++ + + +  +   +   + G R  
Sbjct: 59   QVFGTIRSLSQFRLTGAQKDFIVVGSDSGRIVILDYNKQKN-VFDKIHQETFGKSGCRRI 117

Query: 116  DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY----- 170
              GQ   IDP  R + +   +    V   +     +   +  LE  +   I F       
Sbjct: 118  VPGQYLAIDPKGRAVMIAACEKKKLVYVLNRDSLARLTISSPLEANKSHTIVFSICAVDC 177

Query: 171  GCAKPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGAD 217
            G   P    +  D  DA             +H+  YE+ L   + V   WS + +DNGA+
Sbjct: 178  GFENPIFAAIELDCSDADQDATGVAASQAQKHLIFYELDLG-LNHVSRKWS-DQVDNGAN 235

Query: 218  LLIPVPPPL---CGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSRY--- 268
            +L+ VP       GVL+  E  ++Y +    +    IP R  +    G +    + +   
Sbjct: 236  MLVTVPGGADGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKTK 295

Query: 269  ------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYI 316
                        L  ++  +  + +     ++V+ L I+     ++A +I  L +  ++ 
Sbjct: 296  NLKPEEFKLFFLLQTEYGDIFKVTLTDGGGDRVSELNIKYFDTIAVAVSICVLKSGFLFA 355

Query: 317  GSSYGDSQLIKLNLQPD-------AKGSYVEV-------------LERYVNLGP------ 350
             S +G+  L +     D       +  S +E              L+  V + P      
Sbjct: 356  ASEFGNHALYQFKGIGDDDNDVVASSASLMETEEGFQPVFFLPRRLKNLVRIDPVESLMS 415

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            I+D  V +L  +   Q+ T  G     SLRI+R G+ ++E A  +L GI   +W+++ + 
Sbjct: 416  IMDMKVSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEMAVSKLPGIPSAVWTVKKNV 475

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
             D FD+++VVSF + T +L++   + +EE    GF     +L       + ++QV    +
Sbjct: 476  MDEFDSYIVVSFTNATLVLSIG--ETVEEVSNSGFLDTAPSLAVSLIGDDSIMQVHPNGI 533

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQL 528
            R +    R   NEW++    ++    +N  QV++A  GG LVY E+   G L EV+  ++
Sbjct: 534  RHIREDGRT--NEWQTSGKRTIAKVGSNRLQVVIALNGGELVYFEVDVTGQLMEVEKHEM 591

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
              +++CLDI P+ +    S+  AVG + D ++RI SL PD  + T         P S+L 
Sbjct: 592  SGDVACLDIAPVPKGRLRSRFLAVGSY-DNTIRILSLDPDDCMQTLSIQSLSSAPESLLF 650

Query: 588  CAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
               +               +L   L  G L   +++  TG L+D +   LG +   L   
Sbjct: 651  LEVQASVGGEDGADHPASLFLSAGLQSGVLSRTVVDTVTGLLSDARSRFLGLKAPKLFPI 710

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
                   +   S RP + Y      L + ++ + + +   F+S    + +       L I
Sbjct: 711  ILGRKCAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCLEGVVSVSGEALRI 770

Query: 696  GTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF--------AICSLKNQSCAEE------ 740
             T++ + +  +   IPL   PR++  Q + +          A+ + + ++  +E      
Sbjct: 771  FTVERLGETFNQTVIPLRYTPRKLVLQPKRKLLVVIESDQGALTAKEREAARKECFEAAQ 830

Query: 741  -------------------------SEMHF-------------VRLLDDQTFEFISTYPL 762
                                     S+ H+             +R+LD +T        L
Sbjct: 831  TGENATGSEDQMENDGEDEDQGDSLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTCLLEL 890

Query: 763  DTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQL 815
               E   SI + +F D +      VGTA  L  +  P +   + FI     ++DG+ L+L
Sbjct: 891  QENEAAFSICTVNFHDKEYGTLLAVGTAKGL--QFTPKRSLTVGFIHIYRFLDDGRSLEL 948

Query: 816  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQ 874
            + + + +G   +L  F G+LLA I   ++LY     D G R L  +C +    +++  + 
Sbjct: 949  LHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKRRLLRKCENKSFPISIVSIH 1003

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
               D I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   N+F
Sbjct: 1004 AYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNIF 1063

Query: 935  TVR-----------KNSEGATDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
              R             + G    E+G+L       E + ++H+G+ +   +  +LV    
Sbjct: 1064 FARLPQDVSDEVEEDPTSGKIKWEQGKLNGALNKVEEIVQFHVGDVITSLQKAALV---- 1119

Query: 977  DSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G    +++GTV G +G + A    +   F   L+ ++R+    + G +H  +RS  
Sbjct: 1120 ---PGGGECIVYGTVMGCVGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-- 1174

Query: 1036 NEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    K+ LDGDL E F    +DL R   DE+ +T      E+ K++EEL
Sbjct: 1175 ---AYFPVKDVLDGDLCEQFPTLPMDLQRKIADELDRTPG----EILKKLEEL 1220


>gi|295666353|ref|XP_002793727.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278021|gb|EEH33587.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1209

 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 293/1222 (23%), Positives = 518/1222 (42%), Gaps = 163/1222 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  +I A  +++ IH   P QG ++ +    ++
Sbjct: 6    SLFMYSLTIQPPTAITQAILGQFAGTKEQQIITASGSKLTIHRPDPTQGKIRTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I TL  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRTLAAFRLAGGSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +   + Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYD 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  +  +A    T             YE+ L     V   WS + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRK-WS-DPVDRSATMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       G L+  E+ I Y  +N  AF+  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLHLLVITHEKE---KVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L  + I   ++   ++TG    LK++      IAS++  L +  +++ 
Sbjct: 303  AFFFLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVA 362

Query: 318  SSYGDS---QLIKLNLQPD----AKGSY--------------------VEVLERYVNLGP 350
            S  G+    Q  KL    D       S+                    V ++E   +L P
Sbjct: 363  SETGNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVESVNSLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  + +L      Q+ T  G     S R +++G+ + E    EL  +   +W+ + + 
Sbjct: 423  LMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D FD ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  EDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  +
Sbjct: 541  RHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRE 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
            +   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKSVQALTSAPSALS 657

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S K  
Sbjct: 658  IMAMADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
              V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I
Sbjct: 718  KAVLALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSI 777

Query: 699  DDIQ-KLHIRSIPLGEHPRR-ICHQEQSRTFAI------------CSLKNQSCAEESEM- 743
            + ++  L   +I L   PR+ I H EQ   + I              L N S A   +  
Sbjct: 778  EKLENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRAKLLNDSDAVNGDAT 837

Query: 744  --------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYY 784
                          H+   ++++D   +   +S   L+  E   S+ + SFS  D   + 
Sbjct: 838  VLPSEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAAVSFSSQDDETFL 897

Query: 785  CVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VGT   ++      + G I ++   EDGK L+ I + + +    +L  F G+LLA I  
Sbjct: 898  VVGTGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGT 957

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
             +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S++ ++YK +E  +
Sbjct: 958  DVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESVTYVVYKSQENRL 1013

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG--------- 949
                 D  + W +   ++D +   G +   NL+ +R   K SE A ++  G         
Sbjct: 1014 IPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQY 1073

Query: 950  ------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLP 1002
                  RL +V  ++  +     +   LV        G    +++  + G +G+ I  + 
Sbjct: 1074 LQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDILVWTGLQGTVGMLIPFIS 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E+  F + L+  L      + G +H  +RS+        AK  +DGDL E++L L   +
Sbjct: 1127 REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGDLCETYLLLPNDK 1181

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
              +I+  ++ SV E+ +++ ++
Sbjct: 1182 KQQIAGELDRSVREIERKIADM 1203


>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
          Length = 1209

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 294/1222 (24%), Positives = 517/1222 (42%), Gaps = 163/1222 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT VT + +G F+  +E  ++ A  +R+ +    P QG +  +L   I+
Sbjct: 6    NMFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G +  +  FR  G  +D++ +AT+  +  ++++  ++++     +        R    GQ
Sbjct: 66   GIVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  LI     + L  V+  +++ +L  +  +   +  VL +  +    G A 
Sbjct: 126  YLAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  DA    T             YE+ L     V   WS + +D  + LL  
Sbjct: 186  PVFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRK-WS-DTVDRTSSLLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLG 271
            VP     P   GVL+ GEE + Y  +N  AF+  IP R   T+     RV   G  + L 
Sbjct: 244  VPGGNDGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVAGVMHKLK 301

Query: 272  DHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAV 313
              AG    L+ T + +                  +V  LKI+      +A+++  L +  
Sbjct: 302  GSAGAFFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGF 361

Query: 314  VYIGSSYGDSQLIKL---------------NLQPDAKGSYVEV------LERYV------ 346
            ++  S +G+    +                +   D   SY  V      LE  V      
Sbjct: 362  LFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESID 421

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G    +W+ 
Sbjct: 422  SMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTT 481

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            + +  D +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV 
Sbjct: 482  KLTKYDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVH 539

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV- 523
               +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG L E  
Sbjct: 540  PKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYD 596

Query: 524  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
            +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P
Sbjct: 597  EKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQALTAAP 655

Query: 583  RSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
             ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  L   S 
Sbjct: 656  SALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSV 715

Query: 638  KNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +       L I
Sbjct: 716  QDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRI 775

Query: 696  GTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEESEMHFV 746
             +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+      
Sbjct: 776  FSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQQSNGDA 835

Query: 747  RLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF-SDDSNV 782
             +L  + F +                IS  P       LD  E   S     F S +   
Sbjct: 836  TVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFASQEGES 895

Query: 783  YYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G+LLA +
Sbjct: 896  FLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQGRLLAGV 955

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
             + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++YK E  
Sbjct: 956  GKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVVYKAEGN 1011

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
             +   A D    W +   ++D +   G +   N++ VR     + + +    E   E HL
Sbjct: 1012 RLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EPGSEIHL 1067

Query: 960  GEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV-IASLP 1002
                N + HG+              LP S       VG    +++  + G +GV I  + 
Sbjct: 1068 MHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGVFIPFVS 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F  L   +
Sbjct: 1127 REDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFSLLPNDK 1181

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1182 KQMIAGELDRSVREIERKISDI 1203


>gi|340959394|gb|EGS20575.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1213

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 282/1225 (23%), Positives = 502/1225 (40%), Gaps = 174/1225 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDV----PIYGR 61
            Y +T   PT +T + +G F+  +E  +I A  +R+   LL P   Q  ++      I+G 
Sbjct: 11   YSLTIQPPTTITQALLGQFSGTKEQQIITASGSRLT--LLQPDPRQGKVNTIVSHDIFGI 68

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I  +  FR  G  +D++ +AT+  +  ++++  + +      +        R    GQ  
Sbjct: 69   IRAMAAFRLAGSHKDYIILATDSGRIAIIEYLPKENRFQRIHLETFGKSGVRRVIPGQYL 128

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  LI     + L  V+  + + +L  +  +   +  V+ +  +    G + P 
Sbjct: 129  AADPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPGVIVLSLVALDVGYSNPV 188

Query: 177  IVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  +  +A    T             YE+ L     V   WS + +D  + LL  VP
Sbjct: 189  FAALEYEYSEADQDPTGQAAKQLEMQLVYYELDLGLNHVVRK-WS-DTVDPTSSLLFQVP 246

Query: 224  -----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDH 273
                 P   GVL+ GEE I Y  +N  AF+  IP R   T+     R    G  + L   
Sbjct: 247  GGNDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPNRKRTIVAGVMHKLKGS 304

Query: 274  AGLLHLLVITH--------------EKEKVTG----LKIELLGETSIASTISYLDNAVVY 315
            AG    L+ T               EK   TG    +KI+      IA ++  L +  ++
Sbjct: 305  AGAFFFLLQTEDGDLFKVTIDMVEDEKGNPTGEVKRVKIKYFDTVPIAHSLCILKSGFLF 364

Query: 316  IGSSYGDSQLIKL---------------NLQPDAKGSYVEV------LERYV------NL 348
            + S +G+    +                +   D    Y  V      LE  V      ++
Sbjct: 365  VASEFGNHHFYQFEKLGDDDDEPEFTSDDFPADWNAPYNPVYFKPRPLENLVLVESIDSM 424

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P+V   V +L  +   Q+    G     S R++++G+ ++E  + EL G    +W+ + 
Sbjct: 425  NPLVGCKVANLTGEDAPQIYAICGNGARSSFRMLKHGLEVSEIVASELPGTPSAVWTTKL 484

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            +  D +D ++V+SF + T +L++   + +EE    GF +   TL         L+Q+   
Sbjct: 485  TKYDEYDAYIVLSFTNATLVLSIG--ETVEEVSDSGFLTTVPTLAVQQMGEEGLIQIHPK 542

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KH 525
             +R +        NEW +P   S+  AT N +QV++A   G +VY E+  DG L E  + 
Sbjct: 543  GIRHIVQGRV---NEWPAPQHRSIVAATTNENQVVIALSSGEIVYFEMDADGSLAEYDEK 599

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
             Q+   ++ L +  + E    S   AVG   D +VRI SL P+  L  K        P S
Sbjct: 600  KQMSGTVTSLSLGKVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQALTAAPSS 658

Query: 585  VLLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
            +L+ + E  +     YL   L  G  L  +L+  TGELTD ++  LG +P  L   + +N
Sbjct: 659  LLIMSMEDSTGGTTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPTKLFQVTVQN 718

Query: 640  TTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V A S RP + Y++   +  + + ++  E+ +   FNS    + +       L I T
Sbjct: 719  QTCVLALSSRPWLGYTAPITRNFVMTPLSYTELGYTWSFNSEQCQEGMVGIHANYLRIFT 778

Query: 698  IDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE---------------- 740
            I+ + +  I +S PL   P+R+    +   F +    N +   E                
Sbjct: 779  IEKLGQTMIQKSCPLTYTPKRLVKHPEQPYFYVIEADNNTLPPELRAQLLEQSGAVNGDA 838

Query: 741  ------------------SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-SDDSN 781
                              S +  V  + ++    +    L+  E   S     F S D  
Sbjct: 839  TVLPPEDFGYPKARGRWASCIEIVDPVSEEQPRVLKRIELEGNEAAVSAAVVPFASQDGE 898

Query: 782  VYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
             +  VGT   ++      T+G I V+  ++DG+ L+ I +   +    +   F G+LLA 
Sbjct: 899  SFLIVGTGKDMVLNPRASTEGAIHVYRFIDDGRDLEFIHKTIIEEPPLAFCPFQGRLLAG 958

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            I + +++Y   L+    R+ Q+E       L + + TR + IVVGD+   ++ ++YK + 
Sbjct: 959  IGKMLRIYDLGLK-QLLRKAQAEVSPQ---LIVSLDTRHNRIVVGDVQHGMTYVVYKPDS 1014

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER---------- 948
              +   A D  A W +   ++D +   G +   NL+ VR     + + +           
Sbjct: 1015 NKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNLWIVRCPERASLESDEPGSEVQLLHA 1074

Query: 949  --------GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IA 999
                     RL+++  ++  +        +LV       VG    +++  + G +GV I 
Sbjct: 1075 RPYLHGAPNRLDLMAHFYPQDLPTSICKTNLV-------VGGQDVLVWSGIQGTVGVLIP 1127

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  E   F + L++++R     + G +H  +R +      V  K  +DGDL E F  L 
Sbjct: 1128 FVTREDADFFQNLESHMRAEDPPLAGRDHLIYRGY-----YVPVKGVIDGDLCERFTLLP 1182

Query: 1060 RTRMDEISKTMNVSVEELCKRVEEL 1084
              +   I+  ++ SV E+ +++ ++
Sbjct: 1183 NDKKQMIAGELDRSVREIERKISDI 1207


>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
          Length = 1209

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 292/1232 (23%), Positives = 520/1232 (42%), Gaps = 185/1232 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT VT + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L         G   
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMSALDVGYEN 185

Query: 175  PTIVVLYQDNKDARHVKT---YEVALK---------DKDFVEGPWSQNNLDNGADLLIPV 222
            P    L  D  ++    T   YE A K           + V   W+ + +D  + +L  V
Sbjct: 186  PIFAALEVDYSESDQDPTGQAYEEAEKLLVYYELDLGLNHVVRKWA-DPVDRTSSMLFQV 244

Query: 223  PPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHAGL 276
            P       GVL+  E+++ Y  +N  AF+  IP R   T+     + +  R++    AG+
Sbjct: 245  PGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTE-----NPERKRFIT---AGV 296

Query: 277  LHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYLDN 311
            +H +                     ++  +  ++TG    LKI+      +AS++  L +
Sbjct: 297  MHKMRGAFFFLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKS 356

Query: 312  AVVYIGSSYGDSQLIKL---------------NLQPDAK------------GSYVEVLER 344
              +Y+ S  G+    +                N   D                 + ++E 
Sbjct: 357  GFLYVASEAGNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVET 416

Query: 345  YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMW 403
              +L P++D  V +L  +   Q+ T SG     + R +++G+ ++E    EL  +   +W
Sbjct: 417  INSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVW 476

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            + + +  D FD ++++SF + T +L++   + +EE    GF S   TL       + L+Q
Sbjct: 477  TTKLTRADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQ 534

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTE 522
            +    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E
Sbjct: 535  IHPRGIRHIMADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAE 592

Query: 523  V-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
              +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K       
Sbjct: 593  YDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTA 651

Query: 581  IPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG++P+ L  
Sbjct: 652  APSALNIMSMSDSSSGGTALYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQ 711

Query: 635  FSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
             S K  T V A S RP + YS    K  + + ++   +     F+S    + +   +   
Sbjct: 712  VSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQN 771

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICS----LKNQSCAEESEMHFV 746
            L I +I+ +   +  +SI L   PRR   H EQ   + I S    L   + A+  E    
Sbjct: 772  LRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKA 831

Query: 747  RLLDDQTF---EF------------------------ISTYPLDTFEYGCSILSCSF-SD 778
            R  D+      EF                        +ST  L+  E   S+ +  F S 
Sbjct: 832  RTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHAKAVVSTIELEENEAAVSVAAVPFTSQ 891

Query: 779  DSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGK 834
            D   +  VGTA  +   N P+   G I ++   EDG+ L+ I + + +    +L  F G+
Sbjct: 892  DDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLALLGFQGR 950

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISL 891
            L+A I   +++Y     D G ++L  +C        I+ L  QT+G  IVV D+ +S++ 
Sbjct: 951  LVAGIGPMLRIY-----DLGMKQLLRKCNAQVVPKTIVGL--QTQGSRIVVSDVRESVTY 1003

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE-- 946
            ++YK++E  +     D  + W ++  ++D +   G +   N++ +R   K SE A ++  
Sbjct: 1004 VVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWMLRCPKKISEQADEDGS 1063

Query: 947  ------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                  ERG       RLE++   +  +         LV        G    +++   +G
Sbjct: 1064 GAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLV-------AGGRDILVWSGFHG 1116

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG++   +  E   F + L+  L      + G +H  +RS+    K V     +DGDL 
Sbjct: 1117 TIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGV-----IDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E++  L       I+  ++ SV E+ +++ ++
Sbjct: 1172 ETYFLLPNDTKMMIAAELDRSVREIERKISDM 1203


>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
 gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
          Length = 1210

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 295/1237 (23%), Positives = 521/1237 (42%), Gaps = 186/1237 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT VT + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L         G   
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMSALDVGYEN 185

Query: 175  PTIVVLYQDNKDARHVKT---YEVALK---------DKDFVEGPWSQNNLDNGADLLIPV 222
            P    L  D  ++    T   YE A K           + V   W+ + +D  + +L  V
Sbjct: 186  PIFAALEVDYSESDQDPTGQAYEEAEKLLVYYELDLGLNHVVRKWA-DPVDRTSSMLFQV 244

Query: 223  PPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHAGL 276
            P       GVL+  E+++ Y  +N  AF+  IP R   T+     + +  R++    AG+
Sbjct: 245  PGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTE-----NPERKRFIT---AGV 296

Query: 277  LHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYLDN 311
            +H +                     ++  +  ++TG    LKI+      +AS++  L +
Sbjct: 297  MHKMRGAFFFLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKS 356

Query: 312  AVVYIGSSYGDSQLIKL---------------NLQPDAK------------GSYVEVLER 344
              +Y+ S  G+    +                N   D                 + ++E 
Sbjct: 357  GFLYVASEAGNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVET 416

Query: 345  YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMW 403
              +L P++D  V +L  +   Q+ T SG     + R +++G+ ++E    EL  +   +W
Sbjct: 417  INSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVW 476

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            + + +  D FD ++++SF + T +L++   + +EE    GF S   TL       + L+Q
Sbjct: 477  TTKLTRADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQ 534

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTE 522
            +    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E
Sbjct: 535  IHPRGIRHIMADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAE 592

Query: 523  V-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
              +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K       
Sbjct: 593  YDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTA 651

Query: 581  IPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG++P+ L  
Sbjct: 652  APSALNIMSMSDSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQ 711

Query: 635  FSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
             S K  T V A S RP + YS    K  + + ++   +     F+S    + +   +   
Sbjct: 712  VSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQN 771

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICS----LKNQSCAEESEMHFV 746
            L I +I+ +   +  +SI L   PRR   H EQ   + I S    L   + A+  E    
Sbjct: 772  LRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKA 831

Query: 747  RLLDDQTF---EF------------------------ISTYPLDTFEYGCSILSCSF-SD 778
            R  D+      EF                        +ST  L+  E   S+ +  F S 
Sbjct: 832  RTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHAKAVVSTIELEENEAAVSVAAVPFTSQ 891

Query: 779  DSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGK 834
            D   +  VGTA  +   N P+   G I ++   EDG+ L+ I + + +    +L  F G+
Sbjct: 892  DDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLALLGFQGR 950

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISL 891
            L+A I   +++Y     D G ++L  +C        I+ L  QT+G  IVV D+ +S++ 
Sbjct: 951  LVAGIGPMLRIY-----DLGMKQLLRKCNAQVVPKTIVGL--QTQGSRIVVSDVRESVTY 1003

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE-- 946
            ++YK++E  +     D  + W ++  ++D +   G +   N++ +R   K SE A ++  
Sbjct: 1004 VVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWMLRCPKKISEQADEDGS 1063

Query: 947  ------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                  ERG       RLE++   +  +         LV        G    +++   +G
Sbjct: 1064 GAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLV-------AGGRDILVWSGFHG 1116

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG++   +  E   F + L+  L      + G +H  +RS+    K V     +DGDL 
Sbjct: 1117 TIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGV-----IDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEE-LTRLH 1088
            E++  L       I+  ++ SV E+ +++    TR H
Sbjct: 1172 ETYFLLPNDTKMMIAAELDRSVREIERKISVCFTRYH 1208


>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
 gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
          Length = 1216

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 299/1221 (24%), Positives = 516/1221 (42%), Gaps = 162/1221 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y ++   P+ +T + +G F+  +E  ++ A  +R+ ++   P QG + P++   ++G I 
Sbjct: 10   YSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
             L  FR  G ++D+L IA++  +  ++++   +    +R   +   + G R    GQ   
Sbjct: 70   DLASFRLAGSSKDYLIIASDSGRITIVEY-LPAQNRFSRIHLETFGKSGVRRVVPGQYLA 128

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
             DP  R  LI       L  V+  +++ +L  +  +   +   L +  +    G + P  
Sbjct: 129  ADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSNPVF 188

Query: 178  VVLY-------QDNKD--ARHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIPVP- 223
              L        QD K   A++V+T    YE+ L     V   W  + +D+ A +L  VP 
Sbjct: 189  AALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVR-KWF-DVVDSTASMLFQVPG 246

Query: 224  ----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHA 274
                P   GVL+ GEE I Y  +N  AF+  IP R   T+  +  R    G  + L   A
Sbjct: 247  GSDGP--SGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPSRKRNIVSGVMHKLKGSA 304

Query: 275  GLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYI 316
            G    L+ T + +                  +V  LKI+      +++ +  L +  +++
Sbjct: 305  GAFFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSGFLFV 364

Query: 317  GSSYGDS---QLIKL------------NLQPDAKGSY------------VEVLERYVNLG 349
             S +G+    Q  KL            +   D K  Y            + ++E   ++ 
Sbjct: 365  ASEFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYPRPTENLALVESIDSMN 424

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  V +L  +   Q+ T SG     + R++++G+ +NE  + +L G    +W+ +  
Sbjct: 425  PLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTTKLR 484

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
             DD +D ++V+SF + T +L++   + +EE    GF S   TL       + LVQV    
Sbjct: 485  RDDEYDAYIVLSFTNGTLVLSIG--ETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKG 542

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ 527
            +R + +    + NEW SP   S+  A  N  QV +A   G +VY E+  DG L E    +
Sbjct: 543  IRHIRNG---VVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKK 599

Query: 528  LEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
              +  ++ L +  + E    S   AVG   D +VRI SL P+  L +K        P ++
Sbjct: 600  EMFGTVTSLSLGEVPEGRLRSSYLAVGC-DDCTVRILSLDPESTLESKSVQALTAAPSAL 658

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   S + 
Sbjct: 659  SIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQK 718

Query: 640  TTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V A S R  + +S    K    + +N +E+     F S    + +       L I  
Sbjct: 719  RTCVLALSSRSWLGFSDPVTKGFTMTPLNYEELEWGWNFVSEQCEEGMVGVNGQFLRIFA 778

Query: 698  IDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV---------- 746
            I+ +    I +SIPL   PR++      R F      N + A E     +          
Sbjct: 779  IEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLAPELREQLMAAPTAVNGDA 838

Query: 747  RLLDDQTFEF---------------------------ISTYPLDTFEYGCSILSCSF-SD 778
            R+L    F +                           +    LD  E   S+   SF S 
Sbjct: 839  RVLPPDEFGYPRGNGRWASCISVVDPLGDGEELEPGVVQRIDLDNNEAALSMAVVSFASQ 898

Query: 779  DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
            D   +  VGT   ++      T+G I V+   EDG+ L+ I + + +    +L  F G+L
Sbjct: 899  DGESFLVVGTGKDMVVNPRRFTEGYIHVYRFSEDGRELEFIHKTKVEEPPTALLPFQGRL 958

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            +A I + +++Y   LR    R+ Q+E       L + + T+G  I+VGD+   +  + YK
Sbjct: 959  VAGIGRMLRIYDLGLR-QLLRKAQAEVAPQ---LIVSLNTQGSRIIVGDVQHGLIYVAYK 1014

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGRLEV 953
             E   +   A D  A W +   ++D D   GA+   NL+ +R  + +   +DE    + +
Sbjct: 1015 SETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQESDEPGSEVHL 1074

Query: 954  V-GEYHLGEFVNRFRHGSLV--MRLPDS------DVGQIPTVIFGTVNGVIGV-IASLPH 1003
            V    +L    NR    + V    +P S       VG    +++G   G IGV I  +  
Sbjct: 1075 VHSRDYLHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLLWGGFQGTIGVLIPFVSR 1134

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            E   F + L+ +LR     + G +H  +R        V  K  +DGDL E +  L   + 
Sbjct: 1135 EDADFFQSLEQHLRSEDPPLAGRDHLMYRGC-----YVPVKGVIDGDLCERYTMLPNDKK 1189

Query: 1064 DEISKTMNVSVEELCKRVEEL 1084
              I+  ++ SV E+ +++ ++
Sbjct: 1190 QMIAGELDRSVREIERKISDI 1210


>gi|302406266|ref|XP_003000969.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
 gi|261360227|gb|EEY22655.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
          Length = 1059

 Score =  226 bits (577), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 266/1045 (25%), Positives = 450/1045 (43%), Gaps = 149/1045 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNVT + +G F   +E  +I A  +RI   L+ P   Q     +L   ++G 
Sbjct: 10   YSLTVQPPTNVTLAVLGQFAGTREQYIITASGSRIT--LVRPDAAQGKVVTVLSHDVFGI 67

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I ++  FR  G  +D+L +AT+  +  ++++    +      +        R    G+  
Sbjct: 68   IRSMAAFRIAGSNKDYLILATDSGRIAIIEYLPAQNRFQRLHLETFGKSGIRRVVPGEFL 127

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE--LQVLDIKFL-YGCAKPT 176
              DP  R  LI     + L  V+  +++ +L  +  +   +  + VL +  L  G A P 
Sbjct: 128  ACDPKGRACLIASLEKNKLVYVLNRNSQAELTISSPLEAHKPGVHVLSMVALDVGYANPV 187

Query: 177  IVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP- 223
               L  D  +A    T + AL  +            + V   WS+  +DN A LL  VP 
Sbjct: 188  FAALETDYTEADQDPTGQAALDVETQLVYYELDLGLNHVVRKWSEP-VDNTASLLFQVPG 246

Query: 224  ----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHA 274
                P   GVL+ GEE I Y  +N  AF+  +P R   T+  +  R    G  + L   A
Sbjct: 247  GNDGP--SGVLVCGEENITYRHSNQEAFRVPVPRRRGATEDPSRKRSIVAGVMHKLKGSA 304

Query: 275  GLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYI 316
            G    L+ T + +                  +V  LKI+      +AS++  L +  +Y+
Sbjct: 305  GAFFFLLQTEDGDLFKITIDMIEDRDGNPTGEVKRLKIKYFDTIPVASSLCILKSGFLYV 364

Query: 317  GSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNLG 349
             S +G+ Q  +                +   D K SY            + ++E   ++ 
Sbjct: 365  ASQFGNYQFYQFEKLGDDDEELEFSSDDFPTDPKQSYEAVFFHPRELENLALVESIDSMN 424

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  V +L  +   Q+ T  G     + RI+++G+ +NE  + EL GI   +W+L+ S
Sbjct: 425  PLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIVASELPGIPSAVWTLKLS 484

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
              D +D ++V+SF + T +L++   + +EE    GF +   TL         L+QV    
Sbjct: 485  RGDQYDAYIVLSFTNATLVLSIG--ETVEEVNDSGFLTSVPTLAAQLLGGEGLIQVHPKG 542

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQ 527
            +R + +      NEW +P   S+  AT N  QV +A   G +VY E+  DG L E    +
Sbjct: 543  IRHIRNGQV---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDSDGSLAEYDEKK 599

Query: 528  LEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
              +  ++CL +  + E    S   AVG   D +VR+ SL P+  L +K        P S+
Sbjct: 600  EMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPETTLESKSVQALTAPPTSL 658

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + A E  S      YL   L  G  L  +L+  TGELTD ++  LG +P+ L   + + 
Sbjct: 659  AVIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVKLFQVTVQG 718

Query: 640  TTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V   S RP + Y+    K  + + +N  ++     F+S    + +   +   L I  
Sbjct: 719  RTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGVVGIQGQSLRIFA 778

Query: 698  IDDIQ-KLHIRSIPLGEHPRRIC-HQEQSRTFAICS--------LKNQSCAEES------ 741
            I+ +   L  +SIPL   PRR+  H E    + I S        L+ Q  A+ S      
Sbjct: 779  IEKLSDTLTQKSIPLTYTPRRMVKHPEHPMFYTIESDNNTLPPELRAQLLADPSVVNGDA 838

Query: 742  ------EMHFVR----------LLD--DQTFEFISTYPLDTFEYGCSILSCSF-SDDSNV 782
                  E  + R          ++D   +  + + T  LD  E   S     F S D+  
Sbjct: 839  RTLPPVEFGYPRAKGRWASCISVIDPLSEELQTLQTVDLDNNEAAVSAAIVPFTSQDNES 898

Query: 783  YYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +  VGT   ++    + T+G I ++   EDG+ L+ I + + +    +L AF G+L+A +
Sbjct: 899  FLVVGTGKDMIVNPRQFTEGYIHIYRFSEDGRELEFIHKTKVEEPPTALLAFQGRLVAGV 958

Query: 840  NQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
             + +++Y    K ML     R+ Q++       L + + T+G  IVVGD+ + ++ ++YK
Sbjct: 959  GKTLRIYDLGQKQML-----RKAQADVAPQ---LIVSLSTQGSRIVVGDVQQGVTYVVYK 1010

Query: 896  HEEGAIEERARDYNANWMSAVEILD 920
                 +     D  A WM+   ++D
Sbjct: 1011 ALSNKLIPFVDDTVARWMTCTTMVD 1035


>gi|226293297|gb|EEH48717.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb18]
          Length = 1208

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 292/1219 (23%), Positives = 516/1219 (42%), Gaps = 163/1219 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG ++ +    ++
Sbjct: 6    SLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I TL  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRTLAAFRLAGGSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +   + Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYD 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  +  +A    T             YE+ L     V   WS + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRK-WS-DPVDRSATMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       G L+  E+ I Y  +N  AF+  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLHLLVITHEKE---KVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L  + I   ++   ++TG    LK++      IAS++  L +  +++ 
Sbjct: 303  AFFFLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVA 362

Query: 318  SSYGDS---QLIKLNLQPD----AKGSY--------------------VEVLERYVNLGP 350
            S  G+    Q  KL    D       S+                    V ++E   +L P
Sbjct: 363  SETGNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  + +L      Q+ T  G     S R +++G+ + E    EL  +   +W+ + + 
Sbjct: 423  LMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D FD ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  EDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  +
Sbjct: 541  RHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRE 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
            +   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKSVQALTSAPSALS 657

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S K  
Sbjct: 658  IMAMADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
              V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I
Sbjct: 718  KAVLALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSI 777

Query: 699  DDIQ-KLHIRSIPLGEHPRR-ICHQEQSRTFAI------------CSLKNQSCAEESEM- 743
            + ++  L   +I L   PR+ I H EQ   + I              L N S A   +  
Sbjct: 778  EKLENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKLLNDSDAVNGDAT 837

Query: 744  --------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYY 784
                          H+   ++++D   +   +S   L+  E   S+ + SFS  D   + 
Sbjct: 838  VLPPEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAAVSFSSQDDETFL 897

Query: 785  CVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VGT   ++      + G I ++   EDGK L+ I + + +    +L  F G+LLA I  
Sbjct: 898  VVGTGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGT 957

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
             +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S++ ++YK +E  +
Sbjct: 958  DVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESVTYVVYKSQENRL 1013

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG--------- 949
                 D  + W +   ++D +   G +   NL+ +R   K SE A ++  G         
Sbjct: 1014 IPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQY 1073

Query: 950  ------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLP 1002
                  RL +V  ++  +     +   LV        G    +++  + G +G+ I  + 
Sbjct: 1074 LQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDILVWTGLQGTVGMLIPFIS 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E+  F + L+  L      + G +H  +RS+        AK  +DGDL E++L L   +
Sbjct: 1127 REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGDLCETYLLLPNDK 1181

Query: 1063 MDEISKTMNVSVEELCKRV 1081
              +I+  ++ SV E+ +++
Sbjct: 1182 KQQIAGELDRSVREIERKI 1200


>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
          Length = 1253

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 280/1246 (22%), Positives = 523/1246 (41%), Gaps = 197/1246 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            +++ Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++
Sbjct: 36   AMFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVF 95

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    G
Sbjct: 96   GVIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPG 154

Query: 119  QIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G  
Sbjct: 155  QFLAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFE 214

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A +  T E A   +    F E     N+        L+   + LI V
Sbjct: 215  NPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITV 274

Query: 223  P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
            P     P   GVLI  E  I Y   N      IR  I +    +D D  R          
Sbjct: 275  PGGSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATH 329

Query: 268  -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +
Sbjct: 330  KTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEF 389

Query: 321  GDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC- 355
            G+  L ++                          QP    + V +++   +L PI+ FC 
Sbjct: 390  GNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQ 447

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFD 414
            + DL  +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD
Sbjct: 448  IADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFD 507

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +
Sbjct: 508  AYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRA 565

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEI 532
              R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++
Sbjct: 566  DKR--VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADV 623

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE 591
             C+ +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E
Sbjct: 624  VCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVE 680

Query: 592  ----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
                            G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L   
Sbjct: 681  MGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRV 740

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
              +    V A S R  + YS   +   + ++ + +     F S   P+ +       L I
Sbjct: 741  RMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRI 800

Query: 696  GTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-- 740
              ++ +  +  + + PL   PR+ + H E +            T A  + + Q  AEE  
Sbjct: 801  LALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMV 860

Query: 741  -----------SEM-------------------------HFVRLLDDQTFEFISTYPLDT 764
                       +EM                           +R+++      +    L+ 
Sbjct: 861  EAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQ 920

Query: 765  FEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKE 820
             E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +  
Sbjct: 921  NEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTP 980

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRG 877
             +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G
Sbjct: 981  VEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIG 1033

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 937
              ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR
Sbjct: 1034 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 1093

Query: 938  --KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
               N+    DE         +RG L       EV+  YH+GE V   +  +L+       
Sbjct: 1094 LPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI------- 1146

Query: 980  VGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 1038
             G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+    
Sbjct: 1147 PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY---- 1202

Query: 1039 KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                 KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1203 -YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1247


>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
          Length = 1209

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 292/1222 (23%), Positives = 520/1222 (42%), Gaps = 163/1222 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++ A  +++ +H   P QG +Q +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPAQGKVQTLYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  ++++   +     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYIIIGSDSGRITIVEY-VPAQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
            Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYE 184

Query: 169  --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
              ++   +     + QD     + +T      YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRR-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       GVL+  E+ IVY  +N  AF+  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENPERKRCITAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLH---LLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L    + ++  E EK TG    LK++      +AS++  L +  +++ 
Sbjct: 303  AFFFLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVA 362

Query: 318  SSYGD-----------------------SQLIKLNLQP----DAKGSYVEVLERYVNLGP 350
            S  G+                       S +I   L P          + ++E   +L P
Sbjct: 363  SETGNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++   + ++  +   Q+ T  G     S R +++G+ ++E    EL  +   +W+ + S 
Sbjct: 423  LMAASITNITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  NDQFDAYIVLSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541  RHIHADQR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQ 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV- 585
            +   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657

Query: 586  LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L + S K  
Sbjct: 658  IMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
              V A S R  + YS    K    + +N   +     F+S    + +   +   L I +I
Sbjct: 718  RAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777

Query: 699  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEM------------ 743
            + +   L    IPL   PR      +   F +    N   S A ++++            
Sbjct: 778  EKLDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATKAKLLSESTAVNGDSA 837

Query: 744  --------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYY 784
                          H+   ++++D   T   +S   L+  E   SI + SF S +   + 
Sbjct: 838  ELPPEDFGYPRGTNHWASSIQVVDPIHTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFL 897

Query: 785  CVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VGT   ++      T G I ++   E+GK L+ I + + +    +L  F G+LLA I  
Sbjct: 898  VVGTGKDMVVSPRTFTCGFIHIYRFQEEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGP 957

Query: 842  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
             +++Y     D G R+L  +C       + + +QT+G  I+V D+ +S++ ++YK++E A
Sbjct: 958  DLRIY-----DLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA 1012

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEY 957
            +   A D    W +   ++D +   G +   N++ +R   K SE A ++  G   +    
Sbjct: 1013 LIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQ 1072

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNGVIGV-IASLP 1002
            +L    NR    SLV+     D   IPT I  T              + G +G+ +  + 
Sbjct: 1073 YLQGAPNRL---SLVIHFYSQD---IPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFIT 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             +   F + L+  L      + G +H  +R +         K  +DGDL E+FL L   +
Sbjct: 1127 RDDVDFFQTLEMQLASQNPPLAGRDHLIYRGY-----YAPCKGVIDGDLCETFLLLPNDK 1181

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1182 KQAIAGELDRSVREIERKISDM 1203


>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1270

 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 294/1236 (23%), Positives = 522/1236 (42%), Gaps = 186/1236 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT VT + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLFSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  LI     + L  V+  +++ +L  +  +   + Q L         G   
Sbjct: 126  YLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMSALDVGYEN 185

Query: 175  PTIVVLYQDNKDARHVKT---YEVALK---------DKDFVEGPWSQNNLDNGADLLIPV 222
            P    L  D  ++    T   YE A K           + V   W+ + +D  + +L  V
Sbjct: 186  PIFAALEVDYSESDQDPTGQAYEEAEKLLVYYELDLGLNHVVRKWA-DPVDRTSSMLFQV 244

Query: 223  PPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHAGL 276
            P       GVL+  E+++ Y  +N  AF+  IP R   T+     + +  R++    AG+
Sbjct: 245  PGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTE-----NPERKRFIT---AGV 296

Query: 277  LHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYLDN 311
            +H +                     ++  +  ++TG    LKI+      +AS++  L +
Sbjct: 297  MHKMRGAFFFLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVASSLLILKS 356

Query: 312  AVVYIGSSYGDSQLIKL---------------NLQPDAK------------GSYVEVLER 344
              +Y+ S  G+    +                N   D                 + ++E 
Sbjct: 357  GFLYVASEAGNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSAENLNLVET 416

Query: 345  YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMW 403
              +L P++D  V +L  +   Q+ T SG     + R +++G+ ++E    EL  +   +W
Sbjct: 417  INSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVPSAVW 476

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            + + +  D FD ++++SF + T +L++   + +EE    GF S   TL       + L+Q
Sbjct: 477  TTKLTRADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQ 534

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTE 522
            +    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E
Sbjct: 535  IHPRGIRHIMADRRV--NEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAE 592

Query: 523  V-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
              +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K       
Sbjct: 593  YDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTA 651

Query: 581  IPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG++P+ L  
Sbjct: 652  APSALNIMSMSDSSSGGTALYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQ 711

Query: 635  FSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
             S K  T V A S RP + YS    K  + + ++   +     F+S    + +   +   
Sbjct: 712  VSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQN 771

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICS----LKNQSCAEESEMHFV 746
            L I +I+ +   +  +SI L   PRR   H EQ   + I S    L   + A+  E    
Sbjct: 772  LRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKA 831

Query: 747  RLLDDQTF---EF------------------------ISTYPLDTFEYGCSILSCSF-SD 778
            R  D+      EF                        +ST  L+  E   S+ +  F S 
Sbjct: 832  RTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHAKAVVSTIELEENEAAVSVAAVPFTSQ 891

Query: 779  DSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGK 834
            D   +  VGTA  +   N P+   G I ++   EDG+ L+ I + + +    +L  F G+
Sbjct: 892  DDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLALLGFQGR 950

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISL 891
            L+A I   +++Y     D G ++L  +C        I+ L  QT+G  IVV D+ +S++ 
Sbjct: 951  LVAGIGPMLRIY-----DLGMKQLLRKCNAQVVPKTIVGL--QTQGSRIVVSDVRESVTY 1003

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE-- 946
            ++YK++E  +     D  + W ++  ++D +   G +   N++ +R   K SE A ++  
Sbjct: 1004 VVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWMLRCPKKISEQADEDGS 1063

Query: 947  ------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                  ERG       RLE++   +  +         LV        G    +++   +G
Sbjct: 1064 GAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLV-------AGGRDILVWSGFHG 1116

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG++   +  E   F + L+  L      + G +H  +RS+    K V     +DGDL 
Sbjct: 1117 TIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGV-----IDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVE-ELTRL 1087
            E++  L       I+  ++ SV E+ +++   +TR+
Sbjct: 1172 ETYFLLPNDTKMMIAAELDRSVREIERKISLRVTRM 1207


>gi|242772631|ref|XP_002478075.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218721694|gb|EED21112.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1209

 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 288/1229 (23%), Positives = 515/1229 (41%), Gaps = 177/1229 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PT VT + +G F   +E  ++ A  +++ IH   P   Q    P+    
Sbjct: 6    NMFMYSLTIQNPTAVTQAILGQFAGTKEQQIVTASGSKLTIH--RPDAAQGKVTPIYTQD 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTD 116
            ++G I +L  FR  G  +D++ I ++  +  ++++   S     R   +   + G R   
Sbjct: 64   VFGIIRSLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVI 122

Query: 117  NGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YG 171
             GQ   +DP  R  LI     + L  V+  +++ +L  +  +   + Q L         G
Sbjct: 123  PGQYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALTALDVG 182

Query: 172  CAKPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADL 218
               P    +  D  +     T             YE+ L     V   WS + +D  +++
Sbjct: 183  YDNPIFAAIEVDYSECDQDPTGRAYEEVEKQLVYYELDLGLNHVVRR-WS-DVIDRTSNI 240

Query: 219  LIPVPPPL---CGVLIIGEETIVYCSAN--AFKAIPI------------RPSITKAYGRV 261
            L  VP       GVL+  E++I Y  +N  AF+ +PI            + SIT      
Sbjct: 241  LFQVPGGADGPSGVLVCAEDSITYRHSNQDAFR-VPIPRRRGPTENPERKRSITAGVMHK 299

Query: 262  DADGSRYLLGDHAGLLHLLVITHEKE---KVTG----LKIELLGETSIASTISYLDNAVV 314
                  +LL    G L  L I   ++   ++TG    LKI+      IA+ +  L +  +
Sbjct: 300  MRGAFFFLLQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPIATNLLILKSGFL 359

Query: 315  YIGSSYGDSQLIKL---------------NLQPDAKGSYVEV------------LERYVN 347
            ++ S  G+    +                ++  D     + V            +E   +
Sbjct: 360  FVASETGNHHFYQFEKLGDDDEETEFPSDDVSADLADPIIPVYFNVRDAENLNLVESVNS 419

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR 406
            L PI+D  + DL  +   Q+ T  G     + R +++G+ ++E    EL  +   +W+ +
Sbjct: 420  LNPIMDCKITDLLAEDAPQIYTICGTGARSTFRTLKHGLDVSEIVESELPSVPSAVWTTK 479

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             +  D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+QV  
Sbjct: 480  LTRKDEFDAYIVLSFTNGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHP 537

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-K 524
              +R + +  R   NEW +P   ++  A  N  QV +A   G +VY E+  DG L E  +
Sbjct: 538  KGIRHILADHR--VNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDE 595

Query: 525  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 583
              Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P 
Sbjct: 596  KRQMSGTVTSLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPS 654

Query: 584  SVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
            ++ + +    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S 
Sbjct: 655  ALNIMSMADSTSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSV 714

Query: 638  KNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            K  + V A S RP + YS    K  + + ++   +     F+S    + +   +   L I
Sbjct: 715  KGQSAVLALSSRPWLGYSDIQTKSFMLTPLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRI 774

Query: 696  GTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDD--- 751
             +I+ +    ++ SIPL   PR      +   F +   +N   A  ++    RLL+D   
Sbjct: 775  FSIEKLDNNVLQESIPLAYTPRHFVKHPEQPLFYVIESENNVLAPATQ---TRLLEDSKL 831

Query: 752  ----------QTFEF----------------------ISTYPLDTFEYGCSILSCSF-SD 778
                      +TF F                      +S   L+  E   S+ + SF S 
Sbjct: 832  QNGEAVIPPAETFGFPRATGHWASCIEVVDPINSKSVLSRLELEENESAVSVAAVSFASQ 891

Query: 779  DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
            D+  +  VGT   V+      + G I ++   EDG+ L+ I + + +    +L AF G+L
Sbjct: 892  DNETFLVVGTGKDVVTYPRSFSAGFIHIYRFQEDGRELEFIHKTKIEEPPLALLAFQGRL 951

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-LALYVQTRGDFIVVGDLMKSISLLIY 894
            +A I + +++Y     D G +++  +C       L + +QT+G  I+V D+ +S++ ++Y
Sbjct: 952  VAGIGKNLRVY-----DLGMKQMLRKCQVEASPNLIVGLQTQGSRIIVSDVQESVTYVVY 1006

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG-- 949
            K++E  +     D  A W +A  ++D +   G +   NL+ VR   K SE + ++  G  
Sbjct: 1007 KYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNLWLVRCPKKVSEESDEDGSGAH 1066

Query: 950  -------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
                         RL+++  ++  +        +LV       VG    +++  + G IG
Sbjct: 1067 LIHERSYLQGTPNRLDLMVHFYTQDIPTSLHKTNLV-------VGGRDILVWTGLQGTIG 1119

Query: 997  -VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
             +I  +  E   F + L+  L      + G  H  +RS+      V  K  +DGDL ES+
Sbjct: 1120 MMIPFISREDVDFFQNLEMQLASQNPPLAGREHLIYRSY-----YVPVKGVIDGDLCESY 1174

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L   +   I+  ++ SV E+ +++ ++
Sbjct: 1175 FLLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|240275059|gb|EER38574.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H143]
          Length = 1134

 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 275/556 (49%), Gaps = 29/556 (5%)

Query: 560  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 615
            V + SLPDL +     LG  G+ +PRSVL+        + L  ++ DG + +F  N +  
Sbjct: 581  VVVMSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFSFNSEDF 640

Query: 616  ELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 674
             LT   K++LG+ QP   +        +VFA  ++P++IY+   +++YS VN  + S +C
Sbjct: 641  SLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSDQASRIC 700

Query: 675  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 734
             FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F I ++K 
Sbjct: 701  HFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRRVAYSAPERAFGIGTIKR 760

Query: 735  --QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVY---Y 784
              +  AE     F+ L D+  F  +  Y L+  E   S++   F     S+ ++++   +
Sbjct: 761  TLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVESVIRAQFPDGIGSEGNDLFKDLF 819

Query: 785  CVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
             VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++AA+ + +
Sbjct: 820  VVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTV 879

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG---- 899
             +Y           L     +      + +   G+ I V DLMKS+S++ Y+        
Sbjct: 880  VVYTLSKGQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQGANGLPD 939

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            ++ E AR +   W +AV  + +D +L ++   NL  + +N  G TD++R RLEV  E  L
Sbjct: 940  SLTEVARHFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEVTSEILL 999

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            GE VNR R  + +     ++    P    GTV G I +   +       L +LQ+ +  +
Sbjct: 1000 GEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMAGM 1058

Query: 1020 IKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNV 1072
            +   GG+   ++R+F N  ++T +   F+DG+LIE FL+      +EI           V
Sbjct: 1059 VVTPGGMPFNKFRAFRNTIRQTEEPYRFVDGELIERFLNCGVELQEEIVGKVIADGVAGV 1118

Query: 1073 SVEELCKRVEELTRLH 1088
            +VE +   VEEL R+H
Sbjct: 1119 TVESVKGLVEELRRMH 1134



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 160/545 (29%), Positives = 250/545 (45%), Gaps = 126/545 (23%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           YVV  H  +++ H+    F  P++  L++AK  R+E +  TP GL       IYG++  L
Sbjct: 3   YVVPIHHASSIRHAIKLQFLEPEKDCLVVAKSNRLEFYSQTPDGLSLEYSKAIYGKVTML 62

Query: 66  EL---------------------------FRPHGEAQDFLFIATERYKFCVLQWDAESSE 98
                                        FRP     D LFI T+R  +  + WD ++  
Sbjct: 63  AKLSRPPLPSKPPPQPQSLDHQLPLQPAPFRPQ---TDILFIGTDRASYFTVSWDQKTKN 119

Query: 99  LIT-RAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIP----FDNKG----- 148
           L T R   D++D   R +  G   +IDP  R + L LY+G+  VIP      ++G     
Sbjct: 120 LRTERKYVDLADPSARASQLGDRCLIDPSGRFLTLELYEGIVTVIPIGQPLRSRGSGRRL 179

Query: 149 ---------------------------QLKEAFNIRLEELQVLDIKFLYGCAK--PTIVV 179
                                      +L E    R+EEL V    FL+  A   P + +
Sbjct: 180 GKRAANASASAAYANQDAAAGAAAADLELGEPCQARVEELLVRSSTFLHTQADTLPRMAL 239

Query: 180 LYQDNKDARHVKTYEV---------------------------ALKDKDFVEGPWSQNNL 212
           LY+D      +K  E+                            LK  D +     +  L
Sbjct: 240 LYEDTMGKVRLKVRELEVMHGGMGMGGGTGSGGGIGADGGIVAVLKGLDLL-----KEEL 294

Query: 213 DNGADLLIPVPPPLCGVLIIGEETIVYC--SANAFKAIPIR-PSITKAYGRVDADGSRYL 269
           + GA  L+PVP PL G+L++GE +I Y   ++N   + P++  +I  A+ +VD  G R+L
Sbjct: 295 EMGASFLVPVPAPLGGLLVLGETSIRYLDDASNECISQPLKEATIFVAWEQVD--GQRWL 352

Query: 270 LGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           L D  G L  L+++      V   K++LLG+   AS + Y+   + +IGS  GDS+LI++
Sbjct: 353 LADDYGRLFFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQGDSELIRI 412

Query: 329 NLQPDAKGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKD 376
                 +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ D
Sbjct: 413 T-----EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFND 466

Query: 377 GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 435
           GSLR VR+G+G+ E   +  ++ I  +W+LR +    F   L+VSF+ ETR+     + E
Sbjct: 467 GSLRSVRSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGE 526

Query: 436 LEETE 440
           +EE E
Sbjct: 527 VEEKE 531


>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
            [Cavia porcellus]
          Length = 1215

 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 280/1243 (22%), Positives = 517/1243 (41%), Gaps = 201/1243 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPD--LNLITKEHLGGEIIPRSVLLCAFE--- 591
            +  +      S+    G+WT    RI S P   L  ++ + L  +  P S  LC  E   
Sbjct: 592  LANVSPGEQRSRFPGCGLWT--YCRIISDPSDCLQPLSMQALPAQ--PES--LCIVEMGG 645

Query: 592  -------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
                         G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 646  TEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 705

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + +     F S   P+ +       L I  +
Sbjct: 706  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILAL 765

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E +            T A  + + Q  AEE     
Sbjct: 766  EKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAA 825

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           +R+++      +    L+  E 
Sbjct: 826  GEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEA 885

Query: 768  GCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKG 823
              S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   + 
Sbjct: 886  AFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEE 945

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFI 880
               ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  +
Sbjct: 946  VPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRV 998

Query: 881  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--K 938
            +V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   
Sbjct: 999  IVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPP 1058

Query: 939  NSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 982
            N+    DE         +RG L       EV+  YH+GE V   +  +L+        G 
Sbjct: 1059 NTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGG 1111

Query: 983  IPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
              ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+       
Sbjct: 1112 SESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YF 1166

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1167 PVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1209


>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
            familiaris]
 gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
 gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda melanoleuca]
 gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
 gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
 gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
 gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
            rotundus]
 gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
          Length = 1217

 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 521/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+  + +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
          Length = 1229

 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 299/1218 (24%), Positives = 514/1218 (42%), Gaps = 162/1218 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y ++   P+ +T + +G F+  +E  ++ A  +R+ ++   P QG + P++   ++G I 
Sbjct: 10   YSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
             L  FR  G ++D+L IA++  +  ++++   +    +R   +   + G R    GQ   
Sbjct: 70   DLASFRLAGSSKDYLIIASDSGRITIVEY-LPAQNRFSRIHLETFGKSGVRRVVPGQYLA 128

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
             DP  R  LI       L  V+  +++ +L  +  +   +   L +  +    G + P  
Sbjct: 129  ADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSNPVF 188

Query: 178  VVLY-------QDNKD--ARHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIPVP- 223
              L        QD K   A++V+T    YE+ L     V   W  + +D+ A +L  VP 
Sbjct: 189  AALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVR-KWF-DVVDSTASMLFQVPG 246

Query: 224  ----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHA 274
                P   GVL+ GEE I Y  +N  AF+  IP R   T+  +  R    G  + L   A
Sbjct: 247  GSDGP--SGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPSRKRNIVSGVMHKLKGSA 304

Query: 275  GLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYI 316
            G    L+ T + +                  +V  LKI+      +++ +  L +  +++
Sbjct: 305  GAFFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSGFLFV 364

Query: 317  GSSYGDS---QLIKL------------NLQPDAKGSY------------VEVLERYVNLG 349
             S +G+    Q  KL            +   D K  Y            + ++E   ++ 
Sbjct: 365  ASEFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYPRPTENLALVESIDSMN 424

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  V +L  +   Q+ T SG     + R++++G+ +NE  + +L G    +W+ +  
Sbjct: 425  PLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTTKLR 484

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
             DD +D ++V+SF + T +L++   + +EE    GF S   TL       + LVQV    
Sbjct: 485  RDDEYDAYIVLSFTNGTLVLSIG--ETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKG 542

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ 527
            +R + +    + NEW SP   S+  A  N  QV +A   G +VY E+  DG L E    +
Sbjct: 543  IRHIRNG---VVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKK 599

Query: 528  LEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
              +  ++ L +  + E    S   AVG   D +VRI SL P+  L +K        P ++
Sbjct: 600  EMFGTVTSLSLGEVPEGRLRSSYLAVGC-DDCTVRILSLDPESTLESKSVQALTAAPSAL 658

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   S + 
Sbjct: 659  SIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQK 718

Query: 640  TTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V A S R  + +S    K    + +N +E+     F S    + +       L I  
Sbjct: 719  RTCVLALSSRSWLGFSDPVTKGFTMTPLNYEELEWGWNFVSEQCEEGMVGVNGQFLRIFA 778

Query: 698  IDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV---------- 746
            I+ +    I +SIPL   PR++      R F      N + A E     +          
Sbjct: 779  IEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLAPELREQLMAAPTAVNGDA 838

Query: 747  RLLDDQTFEF---------------------------ISTYPLDTFEYGCSILSCSF-SD 778
            R+L    F +                           +    LD  E   S+   SF S 
Sbjct: 839  RVLPPDEFGYPRGNGRWASCISVVDPLGDGEELEPGVVQRIDLDNNEAALSMAVVSFASQ 898

Query: 779  DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
            D   +  VGT   ++      T+G I V+   EDG+ L+ I + + +    +L  F G+L
Sbjct: 899  DGESFLVVGTGKDMVVNPRRFTEGYIHVYRFSEDGRELEFIHKTKVEEPPTALLPFQGRL 958

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            +A I + +++Y   LR    R+ Q+E       L + + T+G  I+VGD+   +  + YK
Sbjct: 959  VAGIGRMLRIYDLGLR-QLLRKAQAEVAPQ---LIVSLNTQGSRIIVGDVQHGLIYVAYK 1014

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGRLEV 953
             E   +   A D  A W +   ++D D   GA+   NL+ +R  + +   +DE    + +
Sbjct: 1015 SETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQESDEPGSEVHL 1074

Query: 954  V-GEYHLGEFVNRFRHGSLV--MRLPDS------DVGQIPTVIFGTVNGVIGV-IASLPH 1003
            V    +L    NR    + V    +P S       VG    +++G   G IGV I  +  
Sbjct: 1075 VHSRDYLHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLLWGGFQGTIGVLIPFVSR 1134

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            E   F + L+ +LR     + G +H  +R        V  K  +DGDL E +  L   + 
Sbjct: 1135 EDADFFQSLEQHLRSEDPPLAGRDHLMYRGC-----YVPVKGVIDGDLCERYTMLPNDKK 1189

Query: 1064 DEISKTMNVSVEELCKRV 1081
              I+  ++ SV E+ +++
Sbjct: 1190 QMIAGELDRSVREIERKI 1207


>gi|154277742|ref|XP_001539706.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
 gi|150413291|gb|EDN08674.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
          Length = 1233

 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 283/1229 (23%), Positives = 510/1229 (41%), Gaps = 183/1229 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P    ++ +    ++
Sbjct: 6    SLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTHGKIRTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I  L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRALAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +   + Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYD 184

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  +  +A             +H+  YE+ L     V   WS + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEADQDPTGQAYEELEKHLVYYELDLGLNHVVRK-WS-DPVDRSASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       G L+  E+ I Y  +N  AF+  IP R   T+     + +  RY+    A
Sbjct: 243  QVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---A 294

Query: 275  GLLH---------------------LLVITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H                     L ++  +  ++TG    LK++      IAS++  L
Sbjct: 295  GVMHKMRGAFFFLLQTEDGDLFKVTLDMVEDDNGQITGEVSRLKLKYFDTVPIASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKL-------------------NLQPDAKGSY--------VEVL 342
             +  +++ S  G+    +                    +L      +Y        V ++
Sbjct: 355  KSGFLFVASETGNHHFYQFEKLGDDDDEIEFTSDAYSADLSEPLPPAYFRPRPYENVNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  +   
Sbjct: 415  ESIDSLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTREDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSL 590

Query: 521  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E    + +   ++CL +  +    + S   AVG   D +VRI SL P+  L  K     
Sbjct: 591  AEYDEKRAMSGTVTCLSLGEVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKSVQAL 649

Query: 579  EIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L
Sbjct: 650  TSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
               S K  T V A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FQVSVKEQTVVLALSSRPWLGYSHLQTKAFMLTPLDYVSLEWGWNFSSEQCVEGMVGIQG 769

Query: 691  GELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLL 749
              L I +++ ++  L   +IPL   PR      +   F +   +N   +  +     +LL
Sbjct: 770  QNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEYPLFYVIEAENNILSPGTR---TKLL 826

Query: 750  DDQTFEFISTYPLDTFEYG-----------------------------------CSILSC 774
            +D       T PL   E+G                                    S+ + 
Sbjct: 827  NDSDTVNGDTTPLPPEEFGYPRGTGHWASCIQIVDPINSKRVISQIELEENEAAVSVAAV 886

Query: 775  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 830
             F S D   +  VGT   ++      T G I ++   E+GK L+ I +   +    +L  
Sbjct: 887  PFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQEEGKELEFIHKTMVEQPPMALLG 946

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
            F G+LLA I   +++Y   ++    R+ Q+    H   L + +QT+G  I+V D+ +S++
Sbjct: 947  FQGRLLAGIGTDLRIYDLGMK-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESLT 1002

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 947
             ++YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++ 
Sbjct: 1003 YVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDG 1062

Query: 948  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
             G               RL +V  ++  +     +   LV    D  V    T + GTV+
Sbjct: 1063 SGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVW---TGLQGTVS 1119

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +I  I+    E+  F + L+  L      + G +H  +RS+        AK  +DGDL 
Sbjct: 1120 MLIPFIS---REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
            E++L L   +  +I+  ++ SV E+ +++
Sbjct: 1172 ETYLLLPNDKKQQIAGELDRSVREIERKI 1200


>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
 gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
          Length = 1217

 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 281/1242 (22%), Positives = 520/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGA 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           VR+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+  + +Y  VG A  L        G  +    +V  G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
          Length = 1223

 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 299/1218 (24%), Positives = 514/1218 (42%), Gaps = 162/1218 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y ++   P+ +T + +G F+  +E  ++ A  +R+ ++   P QG + P++   ++G I 
Sbjct: 10   YSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
             L  FR  G ++D+L IA++  +  ++++   +    +R   +   + G R    GQ   
Sbjct: 70   DLASFRLAGSSKDYLIIASDSGRITIVEY-LPAQNRFSRIHLETFGKSGVRRVVPGQYLA 128

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
             DP  R  LI       L  V+  +++ +L  +  +   +   L +  +    G + P  
Sbjct: 129  ADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSNPVF 188

Query: 178  VVLY-------QDNKD--ARHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIPVP- 223
              L        QD K   A++V+T    YE+ L     V   W  + +D+ A +L  VP 
Sbjct: 189  AALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVR-KWF-DVVDSTASMLFQVPG 246

Query: 224  ----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHA 274
                P   GVL+ GEE I Y  +N  AF+  IP R   T+  +  R    G  + L   A
Sbjct: 247  GSDGP--SGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPSRKRNIVSGVMHKLKGSA 304

Query: 275  GLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYI 316
            G    L+ T + +                  +V  LKI+      +++ +  L +  +++
Sbjct: 305  GAFFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVRRLKIKYFDTIPVSNNLCILKSGFLFV 364

Query: 317  GSSYGDS---QLIKL------------NLQPDAKGSY------------VEVLERYVNLG 349
             S +G+    Q  KL            +   D K  Y            + ++E   ++ 
Sbjct: 365  ASEFGNHLFYQFEKLGDDDEELEFFSSDFPVDPKEPYEPVYFYPRPTENLALVESIDSMN 424

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            P++D  V +L  +   Q+ T SG     + R++++G+ +NE  + +L G    +W+ +  
Sbjct: 425  PLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTTKLR 484

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
             DD +D ++V+SF + T +L++   + +EE    GF S   TL       + LVQV    
Sbjct: 485  RDDEYDAYIVLSFTNGTLVLSIG--ETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKG 542

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ 527
            +R + +    + NEW SP   S+  A  N  QV +A   G +VY E+  DG L E    +
Sbjct: 543  IRHIRNG---VVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKK 599

Query: 528  LEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
              +  ++ L +  + E    S   AVG   D +VRI SL P+  L +K        P ++
Sbjct: 600  EMFGTVTSLSLGEVPEGRLRSSYLAVGC-DDCTVRILSLDPESTLESKSVQALTAAPSAL 658

Query: 586  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   S + 
Sbjct: 659  SIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQK 718

Query: 640  TTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
             T V A S R  + +S    K    + +N +E+     F S    + +       L I  
Sbjct: 719  RTCVLALSSRSWLGFSDPVTKGFTMTPLNYEELEWGWNFVSEQCEEGMVGVNGQFLRIFA 778

Query: 698  IDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV---------- 746
            I+ +    I +SIPL   PR++      R F      N + A E     +          
Sbjct: 779  IEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLAPELREQLMAAPTAVNGDA 838

Query: 747  RLLDDQTFEF---------------------------ISTYPLDTFEYGCSILSCSF-SD 778
            R+L    F +                           +    LD  E   S+   SF S 
Sbjct: 839  RVLPPDEFGYPRGNGRWASCISVVDPLGDGEELEPGVVQRIDLDNNEAALSMAVVSFASQ 898

Query: 779  DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
            D   +  VGT   ++      T+G I V+   EDG+ L+ I + + +    +L  F G+L
Sbjct: 899  DGESFLVVGTGKDMVVNPRRFTEGYIHVYRFSEDGRELEFIHKTKVEEPPTALLPFQGRL 958

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            +A I + +++Y   LR    R+ Q+E       L + + T+G  I+VGD+   +  + YK
Sbjct: 959  VAGIGRMLRIYDLGLR-QLLRKAQAEVAPQ---LIVSLNTQGSRIIVGDVQHGLIYVAYK 1014

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGRLEV 953
             E   +   A D  A W +   ++D D   GA+   NL+ +R  + +   +DE    + +
Sbjct: 1015 SETNRLIPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQESDEPGSEVHL 1074

Query: 954  V-GEYHLGEFVNRFRHGSLV--MRLPDS------DVGQIPTVIFGTVNGVIGV-IASLPH 1003
            V    +L    NR    + V    +P S       VG    +++G   G IGV I  +  
Sbjct: 1075 VHSRDYLHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLLWGGFQGTIGVLIPFVSR 1134

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            E   F + L+ +LR     + G +H  +R        V  K  +DGDL E +  L   + 
Sbjct: 1135 EDADFFQSLEQHLRSEDPPLAGRDHLMYRGC-----YVPVKGVIDGDLCERYTMLPNDKK 1189

Query: 1064 DEISKTMNVSVEELCKRV 1081
              I+  ++ SV E+ +++
Sbjct: 1190 QMIAGELDRSVREIERKI 1207


>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1212

 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 302/1235 (24%), Positives = 514/1235 (41%), Gaps = 186/1235 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PTNV  + +G F   +E  +I    +R+   LL P   Q     +L   
Sbjct: 6    NMFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGAGSRLA--LLRPDSSQGKVITVLSHD 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQW---DAESSELITRAMGDVSDRIGRP 114
            I+G I +L  FR  G  +D+L +AT+  +  ++++   +   S+L     G    R   P
Sbjct: 64   IFGIIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPKENRFSKLHLETFGKSGVRRVIP 123

Query: 115  TDNGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL--- 169
               G+    DP  R  LI     + L  V+  +++ +L  +  +   +  VL I  +   
Sbjct: 124  ---GEYLACDPKGRACLIASIEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALD 180

Query: 170  YGCAKPTIVVLYQDNKDARHVKTYEVALKDKD-------------FVEGPWSQNNLDNGA 216
             G A P    L  D  +     T E AL+D +              V   WS+  +D+ A
Sbjct: 181  VGYANPVFAALEIDYTEVDQDSTGE-ALRDLETQLVYYELDLGLNHVVRKWSEP-VDSTA 238

Query: 217  DLLIPVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGS 266
             LL  VP     P   GVL+ GEE I Y  +N  AF+  IP R   T+  +  R    G 
Sbjct: 239  SLLFQVPGGNDGP--SGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRTIISGV 296

Query: 267  RYLLGDHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISY 308
             + L   AG    L+ T + +                  +V  LKI+       A+++  
Sbjct: 297  MHKLKGSAGAFFFLLQTEDGDMFKVTIDMVEDDEGNTTGEVRRLKIKYFDTVPPAASLCI 356

Query: 309  LDNAVVYIGSSYGD---SQLIKL------------NLQPDAKGSYVEV------------ 341
            L +  +Y+ S +G+    Q  KL            +   DA+ SY  V            
Sbjct: 357  LKSGFLYVASQFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYDPVYFYPRPLENLVL 416

Query: 342  LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-K 400
            +E   ++ P++D  + +L  +   Q+ T  G     + R +++G+ INE  S EL GI  
Sbjct: 417  VESIPSMNPLLDCKIANLTGEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSELPGIPS 476

Query: 401  GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 460
             +W+L+ + ++ +D ++V+SF + T +L++   + +EE    GF +   TL       + 
Sbjct: 477  AVWTLKLNRNEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGEDG 534

Query: 461  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGI 519
            L+QV    +R + +      N+W +P   S+  AT NA QV +A   G +VY E+  DG 
Sbjct: 535  LIQVHPKGIRHIRNGQV---NQWDAPQHRSIVAATTNAHQVAIALSSGEIVYFEMDDDGS 591

Query: 520  LTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLG 577
            L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K    
Sbjct: 592  LAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQA 650

Query: 578  GEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
                P S+ + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + + 
Sbjct: 651  LTAAPTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVR 710

Query: 632  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            L   + +  T V   S RP + Y+    K  + + +N  ++     F S    + +   +
Sbjct: 711  LFQVTVQGRTCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWNFTSEQCEEGIVGIQ 770

Query: 690  EGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQS-----CAE---- 739
               L I ++D +    I+ SIPL   P+++        F +    N +     CA+    
Sbjct: 771  GQTLRIFSVDRLGDTLIQSSIPLTYTPKKMVKHPDQPLFYVIEADNHTLSPALCAQLLAD 830

Query: 740  -------------------------ESEMHFVRLL--DDQTFEFISTYPLDTFEYGCSIL 772
                                      S +  V  L  D Q  + I    L+  E   S+ 
Sbjct: 831  PARVNGDSKVLPPEEFGHPRGNRRWASCISVVDPLAEDGQVLQRID---LEENEAAVSLA 887

Query: 773  SCSFSDDSN-VYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSL 828
              +F+   N  +  VGT   +   P         I  F  +   L  I + + +    ++
Sbjct: 888  IVTFASQENETFLVVGTGKDMVLNPRSFSDAFVHIYRFERDGRGLVFIHKTKVEEPPMAM 947

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
              F G++L  I + +++Y   +R    R+ Q+E      I++L  Q  G  IVVGD+ + 
Sbjct: 948  IPFQGRVLVGIGKMLRIYDLGMR-QLLRKSQAEVAPQ-QIVSLNAQ--GSRIVVGDVQQG 1003

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATD 945
            I+ +++K +   +     D  A W +   ++D +   G +   N+F VR   K SE A +
Sbjct: 1004 ITYVVFKQQTNKLIPFVDDTVARWTTCSTMVDYETTAGGDKFGNIFIVRAPQKASEEADE 1063

Query: 946  EERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
            E  G               RL+++   +  +        SLV       VG    +++  
Sbjct: 1064 EPAGLHLLNARSYLHGTSHRLDLMCHLYTQDIPTSITKTSLV-------VGGQEVLLWSG 1116

Query: 991  VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            + G IGV I  +  E   F + L+ +LR     + G +H  +RS+    K V     +DG
Sbjct: 1117 LMGTIGVLIPFVTREDADFFQSLEQHLRAEDPPLAGRDHLMYRSYYAPMKGV-----IDG 1171

Query: 1050 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1172 DLCERYALLPNDKKQMIAGELDRSVREIERKISDI 1206


>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
 gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
 gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
            jacchus]
 gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
 gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
 gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
 gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
            boliviensis]
 gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
 gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=STAF130; AltName:
            Full=Spliceosome-associated protein 130; Short=SAP 130
 gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
 gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
 gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
 gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
 gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
 gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
 gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
 gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
 gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
          Length = 1217

 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 520/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
          Length = 1208

 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 289/1236 (23%), Positives = 514/1236 (41%), Gaps = 183/1236 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL-TPQG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++IA  +++ IH   + QG ++ +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAIIGQFSGVKEQQIVIASGSKLSIHEPDSHQGKIRTLYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYIIIGSDSGRIAIVEY-VPSQNRFNRIHLETFGKSGIRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +     Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTLVFALTALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  ++    T             YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVDYTESDQDPTGAAYQEAEKLLVYYELDLGLNHVVRR-WA-DPVDRSAAMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       GVL+ GE  I Y  +N  AF+  IP R   T+     + +  RY+    A
Sbjct: 243  QVPGGADGPSGVLVCGEGNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---A 294

Query: 275  GLLHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H +                     ++  E  ++TG    LK++      +AS++  L
Sbjct: 295  GVVHKMRRAFFCLLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKLN-----------------------LQP----DAKGSYVEVL 342
             N  +++ S  G+    +                         L P          + ++
Sbjct: 355  KNGFLFVASETGNHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   +L P++   + +L      Q  T SG     + R +++G+ ++E    EL  +   
Sbjct: 415  ESINSLNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D +D ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTRNDQYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSL 590

Query: 521  TEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E  +  ++   ++CL +  +      S   AVG   D +VRI SL PD  L  K     
Sbjct: 591  AEYDEKREMSGTVTCLSLGEVPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQAL 649

Query: 579  EIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L
Sbjct: 650  TSAPSALSIMSMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             + S K    V A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQG 769

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF---- 745
              L I +I+ +   L   +IPL   PR      +   F +    N   +  ++       
Sbjct: 770  QNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDS 829

Query: 746  ------VRLLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSFS 777
                  V  L  + F +                      IS   L+  E   S+ +  FS
Sbjct: 830  KAANGEVAELPPEDFGYPRGTGHWASCIQVVDPINSKAVISRIELEENEAAVSVAAVPFS 889

Query: 778  D-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 831
              D   +  VGT     V P  +  + G I ++   EDGK L+ I + + +   ++L AF
Sbjct: 890  SQDDETFLVVGTGKDMVVYPPSS--SCGFIHIYRFQEDGKELEFIHKTKVESPPHALLAF 947

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSIS 890
             G+LLA I + +++Y     D G ++L  +C       L + +QT+G  I+V D+ +S++
Sbjct: 948  QGRLLAGIGRNLRIY-----DLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQESVT 1002

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 947
             ++YK++E  +   A D  A W +   ++D +   G +   NL+ +R   K SE A ++ 
Sbjct: 1003 YVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEADEDG 1062

Query: 948  RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNG 993
             G   +    +L    NR    SL++     D   IPT I  T              + G
Sbjct: 1063 SGAHLIHERQYLQGAPNRL---SLMVHFYPQD---IPTSIQKTQLVAGGRDILVWTGLQG 1116

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +G++   +  E   F + L+  L      + G +H  +RS+        AK  +DGDL 
Sbjct: 1117 TVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDHLIYRSY-----YAPAKGTIDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            E++  L   +   I+  ++ SV E+ +++     LH
Sbjct: 1172 ETYFTLPNDKKLMIAGELDRSVREIERKISVSPLLH 1207


>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
          Length = 1217

 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 520/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
 gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
 gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
 gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
 gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
 gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
          Length = 1217

 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 520/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
 gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
          Length = 1221

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 288/1255 (22%), Positives = 510/1255 (40%), Gaps = 212/1255 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGR 61
            ++ Y +T  + + +  +  GNF++P+   +++++   +E+      G +Q ++   ++G 
Sbjct: 1    MFLYSLTLSRASGIQSAVYGNFSAPKAQEVVVSRGKILELLRPNENGKMQTVVATEVFGC 60

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I ++   R  G   D L + ++  +  +L+++ + +  + +   +   R G R    GQ 
Sbjct: 61   IRSMAAVRLTGSILDHLVVGSDSGRIILLKFNKDKNVWV-KVHQETFGRSGCRRIVPGQY 119

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCA 173
              +DP  R  +IG         V+  D    L    +  LE  +   I F       G  
Sbjct: 120  IAVDPKGRACMIGAVEKQKFVYVLNRDAAANL--TISSPLEAHKSHHITFSICGMDCGFD 177

Query: 174  KPTIVVLYQDNKDARHVKTYE---VALKDKDFVEGPWSQNN--------LDNGADLLIPV 222
             P    +  D  +A    T E   +A K   F E     NN        +DNGA+LL+ V
Sbjct: 178  NPIFAAIELDYSEADQDPTGEAASMAQKHLTFYEMDLGLNNVLRKWTEPIDNGANLLVAV 237

Query: 223  PPPL---CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVL+  E  I+Y + +  +   + P       R D  G R            
Sbjct: 238  PGGADGPGGVLVCAENFIIYKNQDHEEVRAVIPR------RSDLPGDRGVLIVSYATHKK 291

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L+    G ++ + + +E E VT LKI+        ++I+ L    ++  S YG+
Sbjct: 292  KAYSFFLVQSEYGDIYKVTLAYEGEAVTELKIKYFDTIPPCTSIAVLKTGFLFAASEYGN 351

Query: 323  SQLIKL----------------------NLQP----DAKGSYVEVLERYVNLGPIVDFCV 356
              L +                         QP          + +++   +L PI D  V
Sbjct: 352  HALYQFVGTGEDDEDVESSSAALVQTEEGFQPVFFEPRPLKNLLLIDEMASLMPITDMKV 411

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDT 415
             +L  +   Q+    G     SL ++R G+ + E A   L G    +W++R +  D FD 
Sbjct: 412  ANLLNEEIPQIYALCGHGPRASLSVLRPGLAVTELAVSPLPGAPTAVWTVRRNATDEFDA 471

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT---------- 465
            F+VVSF + T  L  ++ +E++ET   GF     TL       N ++Q T          
Sbjct: 472  FIVVSFANAT--LVFSIGEEVKETNESGFLGTVPTLHTQLLADNSMLQATFFDLSEPQVY 529

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY--LEIGDGILTEV 523
             G +R +    R   NEWK P   ++  A +N  QV +A  GG +    LE+G G+L E 
Sbjct: 530  PGGLRHIKPDRR--INEWKVPGRRNIKAAASNEKQVAIALQGGEVTVFELEVGTGLLVEA 587

Query: 524  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
            +   L  ++SCL+I P+ E    S   AVG + D +VR+ SL P   L          +P
Sbjct: 588  EKRDLGEDVSCLEIPPVPEGLVRSSFLAVGTY-DQTVRVLSLDPGQGLKNLSMQALNSVP 646

Query: 583  RSVLLC---------AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
             S+L+          A EG  +L   L +G L+   ++  +G+LTD +   LGT+P  L 
Sbjct: 647  ESILMLYNTGPGTERATEGGLFLHVGLQNGILIRSEVDRISGQLTDSRTRFLGTKPPKLF 706

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
              + +    + A S RP + Y+   +   S ++ + + +   F S   P+      +  L
Sbjct: 707  AAAVRGNRCMLALSSRPWLGYNDQGRFNLSPLSYEALDYASGFASDQCPEGFVAVVKSTL 766

Query: 694  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC--------------- 737
             I  ++++    + ++  L   PRR+    +++   I    N +                
Sbjct: 767  RILAVENVGDAFNTQACRLRYTPRRLLIHPETKLLMIAESDNAAIPLAEREDLQAKLAAL 826

Query: 738  AEES----------------EMHF-------------VRLLDDQTFEFISTYPLDTFEYG 768
            AEE                 E  F             +RL+D  T   +    +D  E  
Sbjct: 827  AEEEGAPVQGVEFNDELAALEEQFGAPKGQPGQWAGCLRLVDPATLSTVFVTEVDNNE-- 884

Query: 769  CSILSCSFSD-------------DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--KL 813
             +I+S +  D                V  C      +P + E     I V+ + DG  +L
Sbjct: 885  -AIVSMALVDLVLPAGPGFGGTEKLLVVGCAKGLRYMPTDCE--AAYIRVYRLADGGKRL 941

Query: 814  QLIAEKETKGAVY-SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHIL 869
            +L+ +    G V  +L  F G+LLA +   ++LY     D G ++L  +C ++     I+
Sbjct: 942  ELVHKTIVDGGVPGALCGFKGRLLAGVGPTLRLY-----DMGKKKLLRKCEYNRLPHQIM 996

Query: 870  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
             + VQ  G  I VGD  +S+ ++ YK  + A    A D    +++ +  LD D  L A +
Sbjct: 997  NITVQ--GPRIYVGDAQESVHMMRYKKADNAFYIFADDIAPRYLTTILPLDYDT-LAAGD 1053

Query: 930  NFNLFTV----RKNSEGATDEERG---------------RLEVVGEYHLGEFVNRFRHGS 970
             F  F V    R+ S+   D+  G               +LE V ++H+G+ +   +   
Sbjct: 1054 KFGNFVVLRLPREASQQVEDDPTGGKMAAASGRLNGAPHKLEEVVKFHVGDTITSLQRAE 1113

Query: 971  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRKVIKGVGGLNHE 1029
            +         G    +++ TV G IGV+    + E   F   L+ +LR+    + G +H 
Sbjct: 1114 M-------QAGGQEVLLYSTVMGAIGVLYPFTNREDVDFFGHLEMHLRQEHPPLCGRDHL 1166

Query: 1030 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +RS          ++ +DGDL   +  +   +   I++ M+ +  E+ K++E++
Sbjct: 1167 SFRS-----AYFPVRSCVDGDLCGQYASIPAKKQQMIAEAMDRTPGEMLKKLEDI 1216


>gi|225683909|gb|EEH22193.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb03]
          Length = 1209

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 291/1222 (23%), Positives = 518/1222 (42%), Gaps = 163/1222 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG ++ +    ++
Sbjct: 6    SLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I TL  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRTLAAFRLAGGSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +   + Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALDVGYD 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  +  +A    T             YE+ L     V   WS + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRK-WS-DPVDRSATMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       G L+  E+ I Y  +N  AF+  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLHLLVITHEKE---KVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L  + I   ++   ++TG    LK++      IAS++  L +  +++ 
Sbjct: 303  AFFFLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLFVA 362

Query: 318  SSYGDS---QLIKLNLQPD----AKGSY--------------------VEVLERYVNLGP 350
            S  G+    Q  KL    D       S+                    V ++E   +L P
Sbjct: 363  SETGNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  + +L      Q+ T  G     S R +++G+ + E    EL  +   +W+ + + 
Sbjct: 423  LMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKLTR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D FD ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  EDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  +
Sbjct: 541  RHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRE 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
            +   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKSVQALTSAPSALS 657

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S K  
Sbjct: 658  IMAMADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
              V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I
Sbjct: 718  KAVLALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSI 777

Query: 699  DDIQ-KLHIRSIPLGEHPRR-ICHQEQSRTFAI------------CSLKNQSCAEESEM- 743
            + ++  L   +I L   PR+ I H EQ   + I              L N S A   +  
Sbjct: 778  EKLENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKLLNDSDAVNGDAT 837

Query: 744  --------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYY 784
                          H+   ++++D   +   +S   L+  E   S+ + SFS  D   + 
Sbjct: 838  VLPPEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAAVSFSSQDDETFL 897

Query: 785  CVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VGT   ++      + G I ++   EDGK L+ I + + +    +L  F G+LLA I  
Sbjct: 898  VVGTGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGT 957

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
             +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S++ +++K +E  +
Sbjct: 958  DVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESVTYVVFKSQENRL 1013

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG--------- 949
                 D  + W +   ++D +   G +   NL+ +R   K SE A ++  G         
Sbjct: 1014 IPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQY 1073

Query: 950  ------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLP 1002
                  RL +V  ++  +     +   LV        G    +++  + G +G+ I  + 
Sbjct: 1074 LQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDILVWTGLQGTVGMLIPFIS 1126

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E+  F + L+  L      + G +H  +RS+        AK  +DGDL E++L L   +
Sbjct: 1127 REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGDLCETYLLLPNDK 1181

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
              +I+  ++ SV E+ +++ ++
Sbjct: 1182 KQQIAGELDRSVREIERKIADM 1203


>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
          Length = 1217

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 520/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYD--GLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEEQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
          Length = 1144

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 282/1207 (23%), Positives = 508/1207 (42%), Gaps = 199/1207 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62
            Y +T  +P+ ++ +  GNF++P+   ++ A+   +E  LL P     +Q +    ++G I
Sbjct: 4    YNLTLSRPSAISCAIYGNFSAPKVHEIVAARGKVLE--LLRPDDAGKVQVIHSTEVFGII 61

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121
             +L  FR  G  QD++   ++  +  +LQ++ E +   TR   +   + G R    G+  
Sbjct: 62   RSLAPFRFPGAQQDYVICGSDSGRIVILQYNKEKN-CFTRIHTETFGKSGCRRIVPGEYL 120

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKFLYGC 172
             +DP  R  +I          V+  DN  +L  +  +   +       L  LD+ F    
Sbjct: 121  AVDPKGRACMIAAVEKSKFVYVLNRDNDARLTISSPLEAHKGSNLCYALTGLDMGF---- 176

Query: 173  AKPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
              P    +  D  +A             +H+  YE+ L     V   +S+  +DNGA++L
Sbjct: 177  DNPVFAAIELDYAEADTDPTGEAASEAQKHLTMYELDLGLNHVVR-KYSEP-VDNGANML 234

Query: 220  IPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHL 279
            IPVP    G    G+  +        + +P        +G +                + 
Sbjct: 235  IPVPG--AGDGPGGQRAVWGGPCARAEKLPACMHACSEFGDI----------------YR 276

Query: 280  LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN-LQPDAKG-- 336
            + + +E E+V  L+I+       A++I  +    ++  S +GD  L + + L  D +G  
Sbjct: 277  VTLDYEGEQVKELRIKYFDSIPPATSICLMRKGFLFAASEFGDHALYQFSSLGDDDEGGV 336

Query: 337  ------------------------SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSG 372
                                    S +E L+R  +L PI+D  V +L  +   Q+    G
Sbjct: 337  ESSSATLMETEEGYQPVFFDPRPLSNLEALDRMDSLAPILDMKVANLAGEEIPQIYAACG 396

Query: 373  AYKDGSLRIVRNGIGI------NEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISET 425
                 +LR++R G+ +      +E A   L G    +W+++ S  D FD ++VVSF + T
Sbjct: 397  RGSRSTLRVLRPGLAVTGKRAAHEMAVSPLPGNPTAVWTIKRSVGDEFDAYIVVSFSNAT 456

Query: 426  RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 485
             +L++   + +EE    GF     TL       + ++QV    +R +    R   NEW++
Sbjct: 457  LVLSIG--ETVEEVNDSGFNGNVPTLQTQLLADDSMLQVYPNGLRHIRPDRR--INEWRA 512

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENP 544
            P   ++  AT N  QV +A GGG ++Y E+   G+L E +  ++  +++CLD+ P+ E  
Sbjct: 513  PGRKTIVKATTNERQVAIALGGGEVIYFELNPQGMLVESEKREMGGDVACLDVAPVPEGR 572

Query: 545  SYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLC------------- 588
            +     AVGM+ D + R+ SL PD  L +++ + +G    P SVLL              
Sbjct: 573  TRCAFLAVGMY-DGAARVLSLQPDSTLKVLSTQAVGA--TPESVLLLDSPLMGKDGTEEG 629

Query: 589  AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 648
            A  G  +L   L +G LL   ++  TG+L+D +   LGT+P  L  F++      F A  
Sbjct: 630  AGSGALFLQVGLVNGVLLRTEVDRVTGQLSDTRTRFLGTKPPKL--FAAA-VPEGFVAVA 686

Query: 649  RPTVIYSSNKKL--LYSNVNLKEVSHMCPFNSAAFPD----SLAIAKEGELTIGTIDDIQ 702
            R T+   + ++L   ++  +L+      P      PD    ++A A    + +   +D+Q
Sbjct: 687  RNTLRVITLERLGEFFNQQSLR--LRYTPRKFVIHPDLKVLAIAEADHAAIPLAQREDLQ 744

Query: 703  KLHIRSIPLGEHPRRICHQEQSRTFAIC------SLKNQSCAEESE-----------MHF 745
            +            RR   + + +  A         +  ++ A E +              
Sbjct: 745  Q------------RRDGMEAEQQGGATAAAAAGPEMDEEAAAREDQWGAPKGEPGQWASC 792

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DSNVYYCVGTAYVL---PEENEPTK 800
            VR++D  + +      ++  E   S+    F    +      VGTA  L   P+E +   
Sbjct: 793  VRIVDPVSLQTTHCIEMEDNEAALSVCLVEFDSHPEHGTLLAVGTAQGLKFYPKECQNGF 852

Query: 801  GRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTR 856
              +  F+ +  +++L+ +   +G   ++ AF G+LL  ++  ++LY    K MLR    R
Sbjct: 853  VHLYRFLDDGKRIELLHKTAVEGVPGAMAAFKGRLLVGVDAVLRLYDMGKKRMLRKCEYR 912

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
             L +       I  L+V   G  I VGD  +S   + YK  +      A D     ++A 
Sbjct: 913  RLPT------RIATLHVS--GSRIYVGDGQESTFFMRYKKGDNQFYIFADDIVPRHVTAA 964

Query: 917  EILDDDIYLGAENNFNLFTVRKNSE-----------GATDEERG-------RLEVVGEYH 958
              LD D   GA+   N+F  R   E           G    E G       +L  +  +H
Sbjct: 965  LHLDYDTLAGADRFGNVFVSRLPQEVSAQVEDDPTGGKYATETGLLGGAPNKLRTINSFH 1024

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLR 1017
            +GE V   +   L         G    +++GT+NG IGV+      E   F + L+ ++R
Sbjct: 1025 VGETVTALQRAVL-------QPGGRELIVYGTINGAIGVLYPFTSKEDCDFFQHLEMHMR 1077

Query: 1018 KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 1077
            +    + G +H  +RSF         K+ +DGDL E +  L+  +   +++ ++ S  E+
Sbjct: 1078 QEHPPLLGRDHLAYRSF-----YFPVKDVVDGDLCEQYPQLAADKARGVAEELDRSPGEV 1132

Query: 1078 CKRVEEL 1084
             K++E++
Sbjct: 1133 LKKLEDI 1139


>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
          Length = 1209

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 287/1232 (23%), Positives = 514/1232 (41%), Gaps = 183/1232 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL-TPQG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++IA  +++ IH   + QG ++ +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAIIGQFSGVKEQQIVIASGSKLSIHEPDSHQGKIRTLYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYIIIGSDSGRIAIVEY-VPSQNRFNRIHLETFGKSGIRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +     Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTLVFALTALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  ++    T             YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVDYTESDQDPTGAAYQEAEKLLVYYELDLGLNHVVRR-WA-DPVDRSAAMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       GVL+ GE  I Y  +N  AF+  IP R   T+     + +  RY+    A
Sbjct: 243  QVPGGADGPSGVLVCGEGNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---A 294

Query: 275  GLLHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H +                     ++  E  ++TG    LK++      +AS++  L
Sbjct: 295  GVVHKMRRAFFCLLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKLN-----------------------LQP----DAKGSYVEVL 342
             N  +++ S  G+    +                         L P          + ++
Sbjct: 355  KNGFLFVASETGNHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   +L P++   + +L      Q  T SG     + R +++G+ ++E    EL  +   
Sbjct: 415  ESINSLNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D +D ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTRNDQYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSL 590

Query: 521  TEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E  +  ++   ++CL +  +      S   AVG   D +VRI SL PD  L  K     
Sbjct: 591  AEYDEKREMSGTVTCLSLGEVPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQAL 649

Query: 579  EIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L
Sbjct: 650  TSAPSALSIMSMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             + S K    V A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQG 769

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF---- 745
              L I +I+ +   L   +IPL   PR      +   F +    N   +  ++       
Sbjct: 770  QNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDS 829

Query: 746  ------VRLLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSF- 776
                  V  L  + F +                      IS   L+  E   S+ +  F 
Sbjct: 830  KAANGEVAELPPEDFGYPRGTGHWASCIQVVDPINSKAVISRIELEENEAAVSVAAVPFS 889

Query: 777  SDDSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 831
            S D   +  VGT     V P  +  + G I ++   EDGK L+ I + + +   ++L AF
Sbjct: 890  SQDDETFLVVGTGKDMVVYPPSS--SCGFIHIYRFQEDGKELEFIHKTKVESPPHALLAF 947

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSIS 890
             G+LLA I + +++Y     D G ++L  +C       L + +QT+G  I+V D+ +S++
Sbjct: 948  QGRLLAGIGRNLRIY-----DLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQESVT 1002

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 947
             ++YK++E  +   A D  A W +   ++D +   G +   NL+ +R   K SE A ++ 
Sbjct: 1003 YVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEADEDG 1062

Query: 948  RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNG 993
             G   +    +L    NR    SL++     D   IPT I  T              + G
Sbjct: 1063 SGAHLIHERQYLQGAPNRL---SLMVHFYPQD---IPTSIQKTQLVAGGRDILVWTGLQG 1116

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +G++   +  E   F + L+  L      + G +H  +RS+        AK  +DGDL 
Sbjct: 1117 TVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDHLIYRSY-----YAPAKGTIDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E++  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1172 ETYFTLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
 gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
          Length = 1217

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 520/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSETAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALRDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVTKKLEDI 1211


>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
          Length = 1217

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 279/1242 (22%), Positives = 520/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C F++    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFANTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
          Length = 1217

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 278/1242 (22%), Positives = 521/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++++  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGIIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNVFEKIHQETFGKSGCRRIVPGQYLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            L ++                          QP    + V +++   +L PI+   + DL 
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPILCCQIADLA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++V
Sbjct: 417  NEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R  
Sbjct: 477  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +
Sbjct: 533  VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSL 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----- 591
              +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E     
Sbjct: 593  ANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGAE 649

Query: 592  -----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +  
Sbjct: 650  KQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQ 709

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++ 
Sbjct: 710  EAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEK 769

Query: 701  IQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------- 740
            +  +  + + PL   PR+ + H E +            T A  + + Q  AEE       
Sbjct: 770  LGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGE 829

Query: 741  ------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYGC 769
                  +EM                           VR+++      +    L+  E   
Sbjct: 830  DERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAF 889

Query: 770  SILSCSFS---DDSNVYYCVGTAYVLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGA 824
            S+  C F+   DD +V   V    +L        G +  + +V +G KL+ + +   +  
Sbjct: 890  SVAVCRFANTGDDWHVLVGVAKDLIL-NPRSVAGGFVYTYKLVNNGEKLEFMHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRILIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D +  W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
          Length = 1217

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 279/1242 (22%), Positives = 519/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEAGNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +      G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFWAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
          Length = 1217

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 519/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
                L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFSLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
 gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
          Length = 1217

 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 275/1241 (22%), Positives = 520/1241 (41%), Gaps = 195/1241 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++++  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNVFEKIHQETFGKSGCRRIVPGQYLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            L ++                          QP    + V +++   +L PI+   + DL 
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPILCCQIADLA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++V
Sbjct: 417  NEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R  
Sbjct: 477  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +
Sbjct: 533  VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSL 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----- 591
              +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E     
Sbjct: 593  ANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTE 649

Query: 592  -----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +  
Sbjct: 650  KQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQ 709

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++ 
Sbjct: 710  EAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEK 769

Query: 701  IQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------- 740
            +  +  + + PL   PR+ + H E +            T A  + + Q  AEE       
Sbjct: 770  LGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGE 829

Query: 741  ------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYGC 769
                  +EM                           +R+++      +    L+  E   
Sbjct: 830  DERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAF 889

Query: 770  SILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAV 825
            S+  C FS+    +Y  VG A  ++        G +  + + +G  KL+ + +   +   
Sbjct: 890  SVAVCRFSNTGEEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLHKTPVEEVP 949

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVV 882
             ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V
Sbjct: 950  AAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQTIGHRVIV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+
Sbjct: 1003 SDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNT 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       EV+  YH+GE V   +  +L+        G   
Sbjct: 1063 NDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+         
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 1171 KNVIDGDLCEQFNSMEPNKQKNVAEELDRTPPEVSKKLEDI 1211


>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
 gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
          Length = 1217

 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 290/1226 (23%), Positives = 505/1226 (41%), Gaps = 179/1226 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYG 60
            ++ Y +T   PT +T + +G F   +E  ++ A  +++ IH   P QG + P+    ++G
Sbjct: 7    MFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPIYSQDVFG 66

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I +L  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    GQ
Sbjct: 67   IIRSLAAFRLAGSNKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               +DP  R  +I     + L  V+  +++ +L  +  +   + Q L         G   
Sbjct: 126  YLAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMCALDVGYEN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  ++    T             YE+ L     V   W+ + +D  A +L  
Sbjct: 186  PVFAALEVDYSESDQDPTGRAFEETEKLLVYYELDLGLNHVVRK-WA-DPVDRTATMLFQ 243

Query: 222  VPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSR-------- 267
            VP       GVL+  E+ + Y   N  AF+  IP R   T+   R     +         
Sbjct: 244  VPGGADGPSGVLVCAEDNVTYRHLNQDAFRVPIPRRRGATENPERKRCITAGVMHKMRGA 303

Query: 268  --YLLGDHAGLLHLLVITHEKE---KVTG----LKIELLGETSIASTISYLDNAVVYIGS 318
              +LL    G L  L I   ++   ++TG    LKI+      IAS +  L +  +Y+ S
Sbjct: 304  FFFLLQTEDGDLFKLTIDMMEDDNGQLTGEVKRLKIKYFDTVPIASNLLILKSGFLYVAS 363

Query: 319  SYGDSQLIKLN----------------------------LQPDAKGSYVEVLERYVNLGP 350
              G+    +                               QP      + +++   +L P
Sbjct: 364  EAGNHHFYQFEKLGDDDEEIEFSSEDFSADPSVPCEPVYFQPRG-AENLNLVDTINSLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++D  V +L  +   Q+ T SGA    + R +++G+ ++E    EL  +   +W+ + + 
Sbjct: 423  LIDSKVANLSEEDAPQIYTISGAGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D FD ++++SF + T +L++   + +EE    GF S   TL       + LVQ+    +
Sbjct: 483  EDEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLVQIHPRGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQ 527
            R +    R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541  RHIMVDRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQ 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
            +   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599  MSGTVTSLSLGEVPEGRIRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAPSALN 657

Query: 587  LCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            + +    S      YL   L  G  L  +L+  TGEL+D +   LG++P+ L   S K  
Sbjct: 658  IMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQ 717

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            T V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I
Sbjct: 718  TAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSI 777

Query: 699  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF--- 754
            + +   +  +SIPL   PRR     +   F +    N   +  +     RLL+D      
Sbjct: 778  EKLDNNMLQQSIPLSYTPRRFVKHPEQPLFYVIESDNNVLSPSTR---ARLLEDSKSRNG 834

Query: 755  --------EF------------------------ISTYPLDTFEYGCSILSCSF-SDDSN 781
                    EF                        + T  L+  E   S+ +  F S D  
Sbjct: 835  DTTVLPPEEFGYPRATGHWASCIQVVDPLDAKAVVHTVELEDNEAAVSVAAVPFTSQDDE 894

Query: 782  VYYCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSLNAFNGKLLA 837
             +  VGT   +   N P+     + I    EDG+ L+ I + + +    +L AF G+L  
Sbjct: 895  TFLVVGTVKDM-TVNPPSSAGGFIHIYRFQEDGRELEFIHKTKVEEPPLALLAFQGRLAV 953

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIY 894
             +   +++Y     D G ++L  +C  H     I+ L  QT+G  IVV D+ +S++ ++Y
Sbjct: 954  GLGSLLRIY-----DLGMKQLLRKCQAHVVPKTIVGL--QTQGSRIVVSDVRESVTYVVY 1006

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE----- 946
            K++E  +     D  + W ++  ++D +   G +   NL+ VR   K SE A ++     
Sbjct: 1007 KYQENVLIPFVDDSISRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEQADEDGSGAH 1066

Query: 947  ---ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
               ERG       RLE++   +  +         LV        G    +++   +G IG
Sbjct: 1067 LIHERGYLHGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILVWTGFHGTIG 1119

Query: 997  VIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
            ++   +  E   F + L+  L      + G +H  +RS+    K V     +DGDL E++
Sbjct: 1120 MLVPFVSREDVDFFQNLEMQLASQHPPLAGRDHLIYRSYYAPVKGV-----IDGDLCETY 1174

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRV 1081
              L       I+  ++ SV E+ +++
Sbjct: 1175 FLLPNDTKMMIAADLDRSVREIERKI 1200


>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
          Length = 1217

 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 280/1242 (22%), Positives = 519/1242 (41%), Gaps = 197/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
             DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  GDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR+ + H E +            T A  + + Q  AEE      
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAG 828

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+++      +    L+  E  
Sbjct: 829  EDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAA 888

Query: 769  CSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGA 824
             S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + +   +  
Sbjct: 889  FSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEV 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIV 881
              ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++
Sbjct: 949  PAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVI 1001

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N
Sbjct: 1002 VSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPN 1061

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+  YH+GE V   +  +L+        G  
Sbjct: 1062 TNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGS 1114

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+        
Sbjct: 1115 ESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFP 1169

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1170 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|221044336|dbj|BAH13845.1| unnamed protein product [Homo sapiens]
          Length = 222

 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/208 (54%), Positives = 151/208 (72%), Gaps = 7/208 (3%)

Query: 275 GLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN 329
           G L +L++  E++      +  L++ELLGETSIA  ++YLDN VV++GS  GDSQL+KLN
Sbjct: 3   GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLN 62

Query: 330 LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 389
           +  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RNGIGI+
Sbjct: 63  VDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIH 122

Query: 390 EQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 449
           E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ GF    Q
Sbjct: 123 EHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQ 181

Query: 450 TLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
           T FC +  + QL+Q   GS RLV    +
Sbjct: 182 TFFCGNVAHQQLIQ-PPGSGRLVKPEGK 208


>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 1211

 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 287/1222 (23%), Positives = 511/1222 (41%), Gaps = 169/1222 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y +T   PT ++ + +G F+  +E  +I A  +R+ +    P QG +  +L   I+G I 
Sbjct: 10   YSLTIQPPTTISQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTVLSHDIFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            ++  FR  G  +D++ +AT+  +  ++++  +++      +        R    GQ    
Sbjct: 70   SIASFRLAGSHKDYIILATDSGRIAIIEYQPKTNRFSRIHLETFGKSGVRRVVPGQYLAA 129

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  LI     + L  V+  + + +L  +  +   +  VL +  +    G A P   
Sbjct: 130  DPKGRACLIAGVEKNKLVYVLNRNAQAELTISSPLEAHKAGVLVLSLVALDVGYANPVFA 189

Query: 179  VLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP--- 223
             L  D  +A    + E   + +            + V   WS + +D  + LL  VP   
Sbjct: 190  ALEIDYSEADQDPSGEAGKEPEAQLVYYELDLGLNHVVRKWS-DAVDPTSSLLFQVPGGN 248

Query: 224  --PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHAGL 276
              P   GVL+ GEE + Y  +N  AF+  IP R   T+     R    G  + L   AG 
Sbjct: 249  DGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRRGATEDPQRKRTIVAGVMHKLKGSAGA 306

Query: 277  LHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIGS 318
               L+ T + +                  +V  LK++      IA ++  L +  ++   
Sbjct: 307  FFFLLQTDDGDLMKVTLDMVEDNDGNPTGEVRRLKVKYFDTIPIAQSLCILKSGFLFSAG 366

Query: 319  SYGDSQLIKL---------------NLQPDAKGSYVEV------------LERYVNLGPI 351
             +G+  L +                +   D++ SY  V            +E   ++ P+
Sbjct: 367  EFGNHHLYQFEKLGDDDEELEFSSDDFPTDSRASYNPVYFHPRPLENLVLVESMDSMNPL 426

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG-MWSLRSSTD 410
            +D  + +L  +   Q+ T  G     + R++++G+ ++E  + EL G    +W+ + +  
Sbjct: 427  IDCKIANLTGEDAPQIYTVCGNRARSTFRMLKHGLEVSEIVASELPGTPAAVWTTKLTKY 486

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D +D ++V+SF + T +L++   + +EE    GF +   TL         L+QV    +R
Sbjct: 487  DEYDGYIVLSFTNATLVLSIG--ETVEEVTESGFLTSVPTLAVQQLGEEGLIQVHPKGIR 544

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQL 528
             +        NEW +P   S+  A  N +QV++A   G +VY E+  DG L E  +  ++
Sbjct: 545  HIVQGRV---NEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDEKKEM 601

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
               ++ L +  + E    S   AVG   D +VRI SL P+  L  K        P S+L+
Sbjct: 602  SGTVTSLSLGRVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQALTSAPSSLLV 660

Query: 588  CAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
             A E    G++ YL   L  G  L  +L+  TGELTD ++  LG +P  L   S +N   
Sbjct: 661  MAMEDSTGGMTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQNQPC 720

Query: 643  VFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            V A S RP + Y+    K    + +   E+     F+S    + +       L I TI+ 
Sbjct: 721  VLALSSRPWLGYTDPITKNFSMTPLIYSELEFGWNFSSEQCLEGMVGIHANFLRIFTIER 780

Query: 701  IQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN------------QSCAEESEMHFV 746
            +    I +SIPL   P+R+  H EQ   + I S  N            QS A   +   +
Sbjct: 781  LGDTMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTLPPELRAQLLEQSGAVNGDAAIL 840

Query: 747  RLLD-----------------DQTFEFISTYPLDTFEYGCSILSCSF----SDDSNVYYC 785
               D                 D   E  S      FE   + +S +     S +   +  
Sbjct: 841  PPEDFGYPRATGRWASCISVVDPLGEEPSVLQRIDFEGNEAAVSAAVVPFSSQEGESFLI 900

Query: 786  VGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
            VGT   ++    + ++G I V+   EDG+ L+ I + + +    +L  F G+LLA I + 
Sbjct: 901  VGTGKDMVLNPRKFSEGYIHVYRFHEDGRDLEFIHKTKVEEPPMALIPFQGRLLAGIGKT 960

Query: 843  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 902
            +++Y   LR    + L+   G     L + +QT+G  I+VGD+ + I+ ++YK E   + 
Sbjct: 961  LRVYDLGLR----QLLRKAQGEVAPQLIVSLQTQGSRIIVGDVQQGITYVVYKPESNKLL 1016

Query: 903  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE--------------- 947
              A D    W +   ++D +   G +   N++ +R  SE A+ E                
Sbjct: 1017 PFADDTINRWTTCTTMVDYESVAGGDKFGNIWILR-CSERASQESDEPGSEIQLLHARNY 1075

Query: 948  ----RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLP 1002
                + RL  +  ++  +        +LV       VG    +++  + G +GV I  + 
Sbjct: 1076 LHGAQSRLSAMAHFYTQDLPTSIVKTNLV-------VGGQDVLVWSGIQGTVGVLIPFVS 1128

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L++++R     + G +H  +R +      V  K  +DGDL E F  L   +
Sbjct: 1129 REDVDFFQNLESHMRAEDPPLAGRDHLIYRGY-----YVPVKGVIDGDLCERFSLLPNDK 1183

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1184 KQMIAGELDRSVREIERKISDI 1205


>gi|212531303|ref|XP_002145808.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
            18224]
 gi|210071172|gb|EEA25261.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
            18224]
          Length = 1209

 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 287/1227 (23%), Positives = 522/1227 (42%), Gaps = 173/1227 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVP 57
            +++ Y +T   PT VT + +G F   +E  ++ A  +++ IH   P   Q    P+    
Sbjct: 6    NMFMYSLTLQNPTAVTQAILGQFAGTKEQQIVTASGSKLTIH--RPDAAQGKVTPIYTQD 63

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTD 116
            ++G I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R   
Sbjct: 64   VFGIIRSLAAFRLAGSSKDYIIIGSDSGRITIIEY-VPSQNRFNRIHLETFGKSGVRRVI 122

Query: 117  NGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YG 171
             GQ   +DP  R  LI     + L  V+  +++ +L  +  +   + Q +         G
Sbjct: 123  PGQYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTVVFALTALDVG 182

Query: 172  CAKP---TIVVLYQDNKDARHVKTYEVALKDKDFVE---------GPWSQNNLDNGADLL 219
               P    I V Y ++      + YE   K   + E           WS + +   +++L
Sbjct: 183  YDNPIFAAIEVDYSESDQDPTGRAYEEVEKQLVYYELDLGLNHVVRRWS-DVIHRTSNIL 241

Query: 220  IPVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR---- 267
              VP       GVL+  E+++ Y  +N  AF+  IP R  P+      R    G      
Sbjct: 242  FQVPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRNGPTENPERKRSIVAGVMHKMR 301

Query: 268  ----YLLGDHAGLLHLLVI---THEKEKVTG----LKIELLGETSIASTISYLDNAVVYI 316
                +LL    G L  L I     E  ++TG    LKI+      IA+ +  L +  +++
Sbjct: 302  GAFFFLLQTEDGDLFKLTIDMVEDENGQLTGEVKRLKIKYFDTVPIAANLLILKSGFLFV 361

Query: 317  GSSYGDSQLIKLN-----------------------LQP---DAKGS-YVEVLERYVNLG 349
             S  G+    +                         + P   + +G+  + ++E   +L 
Sbjct: 362  ASETGNHHFYQFEKLGDDDEETEFSSDDVSADPADPINPVYFNLRGAENLNLVESINSLN 421

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 408
            PI+D  + D   +   Q+ T  G     + R +++G+ ++E    EL  +   +W+ + +
Sbjct: 422  PIMDCKITDAIGEDAPQIYTICGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLT 481

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
             +D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    
Sbjct: 482  RNDEFDAYIVLSFTNGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKG 539

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHA 526
            +R + +  R   NEW +P   ++  A  N  QV +A   G +VY E+  DG L E  +  
Sbjct: 540  IRHILADHR--VNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKR 597

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
            Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P ++
Sbjct: 598  QMSGTVTSLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656

Query: 586  -LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
             ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S K 
Sbjct: 657  NIMSMIDSTSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVKG 716

Query: 640  TTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
               V A S RP + YS    K  + ++++   +     F+S    + +   +   L I +
Sbjct: 717  QPAVLALSSRPWLGYSDVQTKSFMLTSLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRIFS 776

Query: 698  IDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDD----- 751
            I+ +    ++ SIPL   PR      +   F +   +N   A  ++    RLL++     
Sbjct: 777  IEKLDNNVLQESIPLAYTPRHFVKHPEQPLFYVIESENNVLAPATQ---TRLLEESKLQN 833

Query: 752  --------QTFEF----------------------ISTYPLDTFEYGCSILSCSF-SDDS 780
                    +TF +                      +S   L+  E   SI + SF S D+
Sbjct: 834  GEAVIPPAETFGYPRATGHWASCIEVVDPVNAKSVLSRLELEENESAVSIAAVSFASQDN 893

Query: 781  NVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLA 837
              +  VGT   V+      + G I ++   EDG+ L+ I + + +    +L AF G+L+A
Sbjct: 894  ETFLVVGTGKDVVTYPRSFSAGFIHIYRFQEDGRELEFIHKTKIEEPPLALLAFQGRLVA 953

Query: 838  AINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKH 896
             I + +++Y     D G +++  +C       L + +QT+G  I+V D+ +S++ ++YK+
Sbjct: 954  GIGKNLRIY-----DLGMKQMLRKCQVEAVPNLIVGLQTQGSRIIVSDVQESVTYVVYKY 1008

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG---- 949
            +E  +     D  A W +A  ++D +   G +   NL+ VR   K S+ + ++  G    
Sbjct: 1009 QENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNLWLVRCPQKASDDSDEDGSGAHLI 1068

Query: 950  -----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
                       RL ++  Y+  +        +LV       VG    +++  + G IG++
Sbjct: 1069 HERSYLQGTANRLNLMIHYYTQDIPTSLHKTNLV-------VGGRDILVWTGLQGTIGIM 1121

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
               +  E   F + L+T L      + G +H  +RS+      V +K  +DGDL ES+  
Sbjct: 1122 VPFISREDVDFFQNLETQLASQNPPLAGRDHLIYRSY-----YVPSKGVIDGDLCESYFL 1176

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L   +   I+  ++ SV E+ +++ ++
Sbjct: 1177 LPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
            tropicalis]
          Length = 1217

 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 275/1241 (22%), Positives = 518/1241 (41%), Gaps = 195/1241 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T  + T ++ +  GNF+  +   +++++   IE  LL P      +  +L V ++G 
Sbjct: 4    YNITLQRATGISFAIHGNFSGTKLQEIVVSRGKIIE--LLRPDANTGKVHTLLTVEVFGV 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ 
Sbjct: 62   IRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHP-SKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 121  GIIDPDCRLIGLHLYD--GLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 121  IAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 241  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+
Sbjct: 296  KSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                          QP    + V V E+  +L PI+   + D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQD-SLSPIMSCQIAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D +D ++
Sbjct: 415  LANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P    +     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+
Sbjct: 533  --VNEWKTPGKKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE--- 591
             +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E   
Sbjct: 591  SLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPEALCIVEMGG 647

Query: 592  -------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
                         G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 648  AERQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + + +   F S   P+ +       L I  +
Sbjct: 708  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 767

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E +            T A  + + Q  AEE     
Sbjct: 768  EKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAA 827

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           +R+++      +    L+  E 
Sbjct: 828  GEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEA 887

Query: 768  GCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKG 823
              S+  C F++  + +Y  VG A  ++        G +  + +V +G KL+ + +   + 
Sbjct: 888  AFSVAVCRFTNTGDDWYVLVGVAKDLILNPRSVAAGLVYTYKLVNNGEKLEFVHKTPVEE 947

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVV 882
               ++  F G++L  + + +++Y     D G ++L  +C   H     + +QT G  +++
Sbjct: 948  VPAAIAPFQGRVLIGVGKLLRIY-----DLGKKKLLRKCENKHISNFIVGIQTIGQRVIL 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+
Sbjct: 1003 SDVQESFIWVRYKRNENQLIIFADDTYPRWVTTSCLLDYDTVAGADKFGNICIVRLPSNT 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       EV+  YH+GE V   +  +L+        G   
Sbjct: 1063 NDDVDEDPTGNKALWDRGLLNGASQKAEVIVNYHVGETVLSVQKTTLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+         
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPICGRDHLSFRSY-----YFPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 1171 KNVIDGDLCEQFNSMEPVKQKSVAEELDRTPPEVSKKLEDI 1211


>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
          Length = 1217

 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 277/1241 (22%), Positives = 518/1241 (41%), Gaps = 195/1241 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNVFEKIHQETFGKSGCRRIVPGQYLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            L ++                          QP    + V +++   +L PI+   + DL 
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPILCCQIADLA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++V
Sbjct: 417  NEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R  
Sbjct: 477  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +
Sbjct: 533  VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSL 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----- 591
              +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E     
Sbjct: 593  ANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTE 649

Query: 592  -----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +  
Sbjct: 650  KQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQ 709

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++ 
Sbjct: 710  EAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEK 769

Query: 701  IQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------- 740
            +  +  + + PL   PR+ + H E +            T A  + + Q  AEE       
Sbjct: 770  LGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGE 829

Query: 741  ------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYGC 769
                  +EM                           +R+++      +    L+  E   
Sbjct: 830  DERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAF 889

Query: 770  SILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAV 825
            S+  C FS+  + +Y  VG A  L        G  +    +V  G KL+ + +   +   
Sbjct: 890  SVAVCRFSNTGDEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVP 949

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVV 882
             ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V
Sbjct: 950  AAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQTIGHRVIV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+
Sbjct: 1003 SDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNT 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       EV+  YH+GE V   +  +L+        G   
Sbjct: 1063 NDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+         
Sbjct: 1116 SLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 1171 KNVIDGDLCEQFNSMEPNKQKNVAEELDRTPPEVSKKLEDI 1211


>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
          Length = 1197

 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 281/1234 (22%), Positives = 512/1234 (41%), Gaps = 201/1234 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T    T +  +  GNF+  ++  +I+A+ TR+E  LL P      +  +L    +G 
Sbjct: 4    YNLTISPTTAINQAIHGNFSGTKQQEIIVARQTRLE--LLKPDAASGKIHTILSHECFGL 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I ++  FR  G ++DF+ + ++  +  +L+++   + +  +   +   + G R    GQ 
Sbjct: 62   IRSIAPFRLTGGSKDFIVVGSDSGRIVILEYNPVKN-IFEKVHQETYGKTGCRRIVPGQY 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIR-------LEELQVLDIKFLYG 171
               DP  R  +I       L  ++  D+   L  +  +        +  +  +D+ F   
Sbjct: 121  LTADPKGRAVMISATEKQKLVYILNRDSAANLTISSPLEAHRSHAIIHHIVAVDVGF--- 177

Query: 172  CAKPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLL 219
               PT   L  D  DA    T E A   +            + V   WS + +D  A+LL
Sbjct: 178  -ENPTFACLEVDYADADTDSTGEAAQNAEKILTYYELDLGLNHVVRKWS-DVVDRKANLL 235

Query: 220  IPVP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLL---- 270
            +PVP     P   GVL+  E  I Y   +A +   +R  I +    ++ D  R ++    
Sbjct: 236  VPVPGGNDGP--SGVLVCTENFIAYKHPDAEE---LRIPIPRRAQPLE-DPKRGIIIIAS 289

Query: 271  GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ------ 324
                G L+ + + H +  V GL I+       A ++S L +  ++  S +G+ +      
Sbjct: 290  ASEEGDLYKVTMDHVQGTVQGLTIKYFDTIPPAISLSILKSGFLFAASEFGNHRHYFFEG 349

Query: 325  --------------------------LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
                                      L+    +P    S V+ LE   ++ P+++  V++
Sbjct: 350  LGDDDDDAEISSAVYMEQETYEGGIPLVYFKPRPLKNLSLVDELE---SMAPLMESKVLN 406

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   ++    G     + RI+  G+   E A  EL G    +W+ +   DD +  ++
Sbjct: 407  LADEETPRIYAICGRGAQSTFRILNQGVEAAELAVSELPGNPSAVWTTKLRADDQYHAYI 466

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            VVSF + T +L++   + +EE    GF +   TL       + LVQV    +R + +  R
Sbjct: 467  VVSFANATLVLSIG--ETVEEVTDTGFLTNAPTLAVQQIGEDALVQVHPHGIRHIRADRR 524

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCL 535
               NEW++P G ++  A  N+ Q+ +A   G +VY E+ + G L E  +H Q+   I+ L
Sbjct: 525  --VNEWRAPQGQTIVEAATNSRQIAIALSNGEIVYFEMDNMGQLNEHQEHRQMSAYITTL 582

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFE- 591
             +  + E    ++  AVG   D +VRI SL PD  L  I+ + L G  +P S  LC  E 
Sbjct: 583  ALGEVPEGRVRARYIAVGC-EDQTVRILSLDPDSCLEPISMQALQG--VPSS--LCIIEM 637

Query: 592  ---------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
                     G  YL   L +G  L  +L+  TG+L+D +   +G + + L   S +    
Sbjct: 638  MDTGIEQGHGTQYLNIGLSNGIFLRTILDTITGQLSDTRARFIGAKSVKLFRISIQGHPA 697

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ 702
            V A S +P V Y+   +L  + ++ + + H   F +   P+ +       L I T++ + 
Sbjct: 698  VLALSTKPWVSYTFQNRLYLTPLSYEMLEHGSAFVTEQCPEGVVAVAGNTLRIFTVEKLG 757

Query: 703  KLHIR-SIPLGEHPRRICHQEQSRTFAIC---------SLKNQSCAEESEMHF------- 745
             +  + SIPL   PR+      +RTF +          S K +   E+    F       
Sbjct: 758  NIFNQVSIPLKYTPRKFALHAPTRTFVVIESDHATFSPSEKAKGIIEKENEGFEIDDDIT 817

Query: 746  --------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSF------SDD 779
                                +RL++      + T  L+  E   S+    F      ++ 
Sbjct: 818  NLDPLQFGHVRNAAGRWASCIRLIEPFEGRTLETIELEDNEAAFSVAMVQFRQNPHATNS 877

Query: 780  SNVYYCVGTAY-VLPEENEPTKGRILVFIVEDG-----KLQLIAEKETKGAVYSLNAFNG 833
            S  +  VGT   V       T G + V+ V  G     +L  I +       Y++ AF G
Sbjct: 878  SEQFVIVGTGQNVNLSPRSCTSGYLHVYRVVQGEQGQLRLHFIHKTPIDDVPYAMLAFQG 937

Query: 834  KLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 889
            +LL    + +++Y    K MLR   T+ + + C     I++L+  T+G  ++  D+ +S+
Sbjct: 938  RLLVGAGKSLRIYDIGKKKMLRKCETKSIPN-C-----IVSLH--TQGHRVIATDVQESV 989

Query: 890  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------------ 937
              +IYKH +  +   A D    WM+   ++D +   G +   N F  R            
Sbjct: 990  HYVIYKHADNRLVVFADDTIPRWMTGSTMVDYETVAGGDKFGNFFVSRLPGSISREVDED 1049

Query: 938  ------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 991
                   + +G       +++ + EY  G+ +      +L+        G    V+  + 
Sbjct: 1050 TTGNRIYHEKGYLQGAPNKIDSLCEYFTGDIITSLHKTTLLS-------GGREVVLTTSF 1102

Query: 992  NGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 1050
             G I + +  L  E   F + L+ ++R     + G +H  +RS+      +  K+ +DGD
Sbjct: 1103 LGAISIYVPFLSKEDVEFFQMLEMHMRAEAPPLAGRDHLLYRSY-----YIPVKSVIDGD 1157

Query: 1051 LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L E F  L+  +   I++ ++ SV ++ K++E++
Sbjct: 1158 LCEQFNTLAAEKKRMIAEELDRSVADVQKKIEDM 1191


>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1216

 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 289/1234 (23%), Positives = 516/1234 (41%), Gaps = 180/1234 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            +++ Y +T   P+N+  + +G FT  +E  ++ A  +R+ +    P    + P++   ++
Sbjct: 6    NMFMYSLTIQPPSNINIAILGQFTGTKEQQIVTASGSRLTLLRPDPTLGKILPIISQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I  L  FR  G  +D++ IA++  +  ++++    +      +        R    GQ
Sbjct: 66   GIIRDLASFRLAGSNKDYIIIASDSGRITIIEYLPAKNRFHRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  LI       L  V+  +++ +L  +  +   +   L +  +    G + 
Sbjct: 126  YLAADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALDVGYSN 185

Query: 175  PTIVVLYQDNKDA---------RHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  DA         ++V+T    YE+ L     V   W  + +D  A++L  
Sbjct: 186  PVFAALEIDYTDADQDSKSDATQNVETVLNYYELDLGLNHVVR-KWF-DVVDPTANMLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVD--ADGSRYLLG 271
            VP     P   GVL+ G+E I Y  +N  AF+  IP R   T+   R      G  + L 
Sbjct: 244  VPGGSDGP--SGVLVCGQENITYRHSNQDAFRVPIPRRKGATEDPNRKRNIVSGVMHKLK 301

Query: 272  DHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAV 313
              AG    L+ T + +                  +V  LKI+      ++S +  L +  
Sbjct: 302  GSAGAFFFLLQTEDGDLFKVTIDMLEDAEGNTTGEVQRLKIKYFDTIPVSSNLCILKSGF 361

Query: 314  VYIGSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYV 346
            +++ S +G+    +                N   D    Y            + ++E   
Sbjct: 362  LFVASEFGNHHFYQFEKLGDDDEELEFSSENFPSDPAEPYEPAYFYPRPTENLALVESVE 421

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            ++ P++D  V +L  +   Q+ T SG     + R++++G+ +NE  + +L G    +W+ 
Sbjct: 422  SMNPLMDLKVANLTDEDAPQIYTVSGNGARSTFRMLKHGLEVNEIVASQLPGTPSAVWTT 481

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            + + DD +D+++V+SF + T +L++   + +EE    GF S   TL       + LVQV 
Sbjct: 482  KIARDDQYDSYIVLSFTNGTLVLSIG--ETVEEVSDTGFLSSVSTLAVQQLGEDGLVQVH 539

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV- 523
               +R + S    + NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  
Sbjct: 540  PRGIRHIRSG---VVNEWPTPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYD 596

Query: 524  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
            +  ++   ++ L +  + E    S   AVG   D +VRI SL P+  L +K        P
Sbjct: 597  ERKEMSGTVTSLSLGEVPEGRLRSSFLAVGC-DDCTVRILSLDPETTLESKSVQALTAAP 655

Query: 583  RSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
             ++ + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + + L   S
Sbjct: 656  SALSIMAMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVS 715

Query: 637  SKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL- 693
             +  T V A S R  + YS   +K    + ++ +E+     F S    + + +  +G+  
Sbjct: 716  VQGMTCVLALSSRSWLGYSDPISKGFTMTPLSYEELEWAWNFRSEQCEEGM-VGVQGQFL 774

Query: 694  ---TIGTIDD--IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV-- 746
                IG + D  IQK    SI L   P+++        F     +N +   E     +  
Sbjct: 775  RICAIGKLGDSMIQK----SISLAYTPKKLIKNPTHPIFYTIEAENNTLPPELREQLLAA 830

Query: 747  --------RLLDDQTFEF---------------------------ISTYPLDTFEYGCSI 771
                    ++L  + F +                           +    L+  E   S+
Sbjct: 831  PTAVNGDTKVLPPEEFGYPRGNGRWASCISVVDPLGDGEEREPSVLQQIHLENNEATVSV 890

Query: 772  LSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYS 827
                F S DS  +  VGT   ++      T+G I V+  +EDG+ L+ I + + +    +
Sbjct: 891  AVVPFASQDSESFLVVGTGKDMVLNPRCFTEGYIHVYRFLEDGRELEFIHKTKVEEPPMA 950

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 887
            L AF GKL+A + + +++Y   LR    R+ QSE       + + +QT+G  IVVGD   
Sbjct: 951  LLAFQGKLVAGVGRSLRIYDLGLR-QLLRKAQSEVAPR---VIVSLQTQGSRIVVGDSQH 1006

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE 947
             +  + YK E   +   A D    W +   ++D +   G +   N++ +R   + + + +
Sbjct: 1007 GLIYVAYKQEANKLIAFADDSIQRWTTCSTMVDYESTAGGDKFGNIWILRCPEKASQEAD 1066

Query: 948  RGRLEVVGEYHLGEFVNRFRHGS-----LVMRLPDSD-----------VGQIPTVIFGTV 991
            +   EV    HL      + HG+     L+  +   D           VG    +++G +
Sbjct: 1067 QPGSEV----HLMH-ARDYLHGTSNRLALMAHVYTQDIATSICKTNLVVGGQEVLLWGGI 1121

Query: 992  NGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 1050
             G IGV I  +  E   F + L+ ++R     + G +H  +RS+      V  K  +DGD
Sbjct: 1122 QGTIGVLIPFVSREDADFFQTLEQHMRSEDPPLAGRDHLMYRSY-----YVPVKGVIDGD 1176

Query: 1051 LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L E F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1177 LCERFTMLPNDKKQMIAGELDRSVREIERKISDI 1210


>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
 gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
          Length = 1205

 Score =  222 bits (566), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 274/1231 (22%), Positives = 503/1231 (40%), Gaps = 180/1231 (14%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPI 58
            M ++NY  T    + +  + VGNF+  ++  ++++  TR+E+  +      L  +    +
Sbjct: 1    MHLYNY--TLQPSSAIVQAAVGNFSGLRQQEILVSNGTRLELLQVDNDSGKLSTVAGADV 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPT 115
            +G I +L  FR  G ++D+  + ++  +  +L++D +++   +L     G    R   P 
Sbjct: 59   FGSIRSLAAFRLTGGSKDYAIVGSDSGRIVILEYDPKTNVFNKLHQETYGKSGTRRIVP- 117

Query: 116  DNGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNI---RLEELQVLDIKFLY 170
              GQ    DP  R  +I       L  V+  D    L  +  +   R   +    +    
Sbjct: 118  --GQYLATDPRGRSVMIAAMENSKLVYVLNRDVATNLTISSPLGAHRASTIVHDVVGVDV 175

Query: 171  GCAKPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGAD 217
            G   P    L  D   +    T             YE+ L     V   WS+   D  A+
Sbjct: 176  GFDNPVYAALEVDYSQSDQDPTGNALRRAEKLLTYYELDLGLNHVVRK-WSEPT-DPRAN 233

Query: 218  LLIPVP------------PPLCGVLIIGEETIVYCSANAFK---AIPIR--PSITKAYGR 260
            LL+ VP            P   GVL+  E  I+Y   +A      IP R  P        
Sbjct: 234  LLVQVPGGQSTNGATHDGP--SGVLVCCENHIIYQHGDAPSHRVPIPRRQDPVADPNQDV 291

Query: 261  VDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
            +      + +    G +    + HE   V+ LKI+      +AS +  L   ++++ S +
Sbjct: 292  IIVAAVMHKMKTEDGDVFKATVDHEDGVVSSLKIKYFETVPVASNLCILKQGLLFVASEF 351

Query: 321  GDSQLIKL------------------------NLQPDAKGSY-------VEVLERYVNLG 349
            G+  L +                           QP  + S+       + +++   +L 
Sbjct: 352  GNHHLYRFCKLGDDDDQPEFSSSSYPSYGMAEPEQPLPRASFDPRPMENLMLIDELSSLN 411

Query: 350  PIVDFCVVDLERQGQG-QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI---KGMWSL 405
            P++D  ++      +  ++    G     S +I+ +G+ ++E AS EL G      +WS 
Sbjct: 412  PVLDAKILKPSLDSEAPKIFAACGRGPASSFKILSHGLEVDEMASSELPGFLAPHSLWST 471

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            +    D +D  LV+SF + T +L++   + +EE +  GF +   TL       N L+QV 
Sbjct: 472  KRMQTDHYDNLLVMSFQNATIVLSIG--ESMEEVKDSGFLTSMPTLAVQQIGENGLIQVH 529

Query: 466  SGSVR-LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 523
            +  +R LV S      NEWK P G ++  A  N  QV++A     +VY E+  +G L E 
Sbjct: 530  THGIRHLVDSQV----NEWKVPQGQTIVAANTNRRQVVVALSSAEIVYFELDQEGQLNEY 585

Query: 524  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 581
            +  + +   +  L +  + E        AVG   D +VR+ SL PD  L T         
Sbjct: 586  QDMKAMGSTVLALGLGEVPEGRLRFPYLAVG-CEDQTVRVMSLDPDSTLETISLQALTAP 644

Query: 582  PRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
            P S+ +      S        ++   L +G LL  +L+   G+LTD +   LGT+P+ L 
Sbjct: 645  PSSICIAYMLDASINKVQRSMFVNIGLANGVLLRTVLDGTNGQLTDTRTRFLGTKPVRLL 704

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
                K    + A S R  + YS  +K+ ++ +  +       F   + P+ +    +  L
Sbjct: 705  RVKLKGEDAILAISSRVWLNYSHQQKMEFTPLACETPECASSFTGESCPEGIISIAKNTL 764

Query: 694  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM--------- 743
            +I T+  +  KL   S+PL   PR+      +R F +     ++ +EE E          
Sbjct: 765  SISTVSKLGMKLKQESVPLAFTPRKFVTHPGNRFFYLIESDQRTLSEEEEKKKLADLNIS 824

Query: 744  ----------------------HF---VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
                                  H+   + + D    + ++T PL   E   SI    F+ 
Sbjct: 825  RDDHPILQLPAKIFGRTRASAGHWASRIHIFDPMEAKTVATLPLKANEAAFSIAVVPFAS 884

Query: 779  DSNVYY-CVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA--VYSLNAFN 832
                Y+  VGTA    V P +   +  ++   + E   L+L+ E   + +    +L AF 
Sbjct: 885  TGGEYHLVVGTAMHHLVTPPQASASYLKVYKIVNEGTGLELLHETPIQDSELPRALLAFQ 944

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
            G+LLA + + +++Y     D G ++L  +         + + T+G  IV+GD+ +S    
Sbjct: 945  GRLLAGVGKALRIY-----DLGKKKLLRKAETKSPTAIVSLATQGSRIVIGDMQESTLFA 999

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS------------ 940
            +YK  E  +     D    W+SA+ ++D +     +   N+F  R +S            
Sbjct: 1000 VYKEAENRLLIFGDDTQPRWVSAMTMVDYNTVAVGDKFGNIFVNRLDSTISDQVDEDPTG 1059

Query: 941  -----EGAT-DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
                 E AT +    + +++  +H+G+ +      SLV       VG    +++  + G 
Sbjct: 1060 AGILHEKATLNGAPHKTKMLAHFHVGDIITSIHKVSLV-------VGGREVLLYTGLQGT 1112

Query: 995  IGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
            IG++  L  ++ + FL  L+ ++R     + G +H  WR +      V  K  +DGDL E
Sbjct: 1113 IGILVPLTSKEDIEFLTMLEQHIRNEQGSLVGRDHLSWRGY-----YVPVKAVIDGDLCE 1167

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            ++  LS ++   I+  ++ +V ++ K+++++
Sbjct: 1168 TYGGLSSSKQSAIASELDRTVGDVLKKLDQM 1198


>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
 gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1209

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 294/1226 (23%), Positives = 517/1226 (42%), Gaps = 171/1226 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT VT + +G F+  +E  ++ A  +R+ +    P QG +  +L   I+
Sbjct: 6    NMFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G +  +  FR  G  +D++ +AT+  +  ++++  ++++     +        R    GQ
Sbjct: 66   GIVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  LI     + L  V+  +++ +L  +  +   +  VL +  +    G A 
Sbjct: 126  YLAADPKGRACLISSLEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  DA    T             YE+ L     V   WS + +D  + LL  
Sbjct: 186  PVFAALEIDYSDADQDPTGQAREEVETQLVYYELDLGLNHVVRK-WS-DTVDRTSSLLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLG 271
            VP     P   GVL+ GEE + Y  +N  AF+  IP R   T+     RV   G  + L 
Sbjct: 244  VPGGNDGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRKGATEDPQRKRVIVSGVMHKLK 301

Query: 272  DHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAV 313
              AG    L+ T + +                  +V  LKI+      +A+++  L +  
Sbjct: 302  GSAGAFFFLLQTDDGDLFKITIDMIEDADGNPTGEVKRLKIKYFDTIPVATSLCILKSGF 361

Query: 314  VYIGSSYGDSQLIKL---------------NLQPDAKGSYVEV------LERYV------ 346
            ++  S +G+    +                +   D   SY  V      LE  V      
Sbjct: 362  LFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESID 421

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            ++ P VD  V +L      Q+ +  G     + R +++G+ ++E  + EL G    +W+ 
Sbjct: 422  SMNPQVDCKVANLTGDDAPQIYSVCGNGARSTFRSLKHGLEVSEIVASELPGTPSAVWTT 481

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            + +  D +D ++V+SF + T +L++   + +EE    GF +   TL       + L+QV 
Sbjct: 482  KLTKYDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTTAPTLAVRQMGEDGLIQVH 539

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV- 523
               +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG L E  
Sbjct: 540  PKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYD 596

Query: 524  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
            +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P
Sbjct: 597  EKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQALTAAP 655

Query: 583  RSVLLCAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
             ++ + + E    G + YL   L  G  L  +L+  TGELTD ++  LG +P  L   S 
Sbjct: 656  SALSIMSMEDSFGGFTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSV 715

Query: 638  KNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +       L I
Sbjct: 716  QDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRI 775

Query: 696  GTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQT 753
             +I+ +    I +SIPL   P+R+  H EQ   + I S  N    E       +LL+ Q+
Sbjct: 776  FSIEKLGDNMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTLPPELR----AKLLEQQS 831

Query: 754  FEFISTYPLDTFEY--------GCSILSCSFSDDSNVYYCVG--------TAYVLP---E 794
                +  P + F Y         C  +    SD+  V   +         +A ++P   +
Sbjct: 832  NGDATILPPEDFGYPKAKGRWASCISIIDPISDEPRVLQRIDLDNNEAAVSAAIVPFASQ 891

Query: 795  ENEP-----------------TKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
            E E                  T+G I V+   EDG+ L+ I +   +    +L  F G+L
Sbjct: 892  EGESFLVVGTGKDMVLNPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPMALIPFQGRL 951

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            LA + + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + ++ ++YK
Sbjct: 952  LAGVGKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGVTYVVYK 1007

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 955
             E   +     D    W +   ++D +     +   N+  VR     + D +    E   
Sbjct: 1008 AEGNRLIPFVDDTLNRWTTCTTMVDYESVASGDKFGNISIVRCPERVSQDTD----EPGS 1063

Query: 956  EYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV-I 998
            E HL    N + HG+              LP S       VG    +++  + G +GV I
Sbjct: 1064 EIHLMHARN-YLHGTPNRLSLQVHFFTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGVFI 1122

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              +  E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F  L
Sbjct: 1123 PFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFSLL 1177

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
               +   I+  ++ SV E+ +++ ++
Sbjct: 1178 PNDKKQMIAGELDRSVREIERKISDI 1203


>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
 gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
          Length = 1227

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 277/1253 (22%), Positives = 498/1253 (39%), Gaps = 203/1253 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G I  L  FR  G  +D++ + ++  +  +L+++A  + L             R    G
Sbjct: 59   FGCIRALMAFRLTGGTKDYIVVGSDSGRIVILEYNAAKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
            P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239  PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATH 293

Query: 268  -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +
Sbjct: 294  RTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEF 353

Query: 321  GDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCV 356
            G+  L ++                           P A  + V +++   +  PI+   V
Sbjct: 354  GNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQV 412

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDT 415
             DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD 
Sbjct: 413  ADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDA 472

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
            +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S 
Sbjct: 473  YIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSD 530

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEIS 533
             R   NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI 
Sbjct: 531  KR--VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIM 588

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE-- 591
            C+ +  + E    S   AVG+  D +VRI SL   N +T   +     P    LC  E  
Sbjct: 589  CMALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMG 646

Query: 592  -----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
                                   G  YL   L +G LL  +L+  +G+L D +   LG++
Sbjct: 647  HTESTTQGALDDDAPAPRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSR 706

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ L     +    V A S R  + Y    +   + ++ + + +   F+S    + +   
Sbjct: 707  PVKLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAI 766

Query: 689  KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQ 735
                L I  ++ +  +  + + PL   PR  + H +  R           T    S + +
Sbjct: 767  STNTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKE 826

Query: 736  SCAEE-------------SEM-------------------------HFVRLLDDQTFEFI 757
              AEE              EM                           +R LD    + +
Sbjct: 827  QMAEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTM 886

Query: 758  STYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GK 812
             + PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     
Sbjct: 887  FSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSS 946

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILAL 871
            L+ +   E      +L  F G+LLA   + +++Y     D G +++  +C   H     +
Sbjct: 947  LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIV 1001

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F
Sbjct: 1002 NIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKF 1060

Query: 932  NLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLV 972
               ++++     TD+            +RG L       E +  +H+GE +   +  +L+
Sbjct: 1061 GNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI 1120

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                    G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +
Sbjct: 1121 -------PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSY 1173

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            RS          KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1174 RS-----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
 gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
          Length = 1227

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 274/1251 (21%), Positives = 498/1251 (39%), Gaps = 199/1251 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G +  L  FR  G  +D++ + ++  +  +L+++   + L             R    G
Sbjct: 59   FGCVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 239  PGGNDGPSGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +G+
Sbjct: 296  KSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                           P A  + V +++   +  PI+   V D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD ++
Sbjct: 415  LANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C+
Sbjct: 533  --VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---- 591
             +  + E    S   AVG+ +D +VRI SL   N +T   +     P    LC  E    
Sbjct: 591  ALGTVPEGEQRSWFLAVGL-SDNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHT 648

Query: 592  ---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
                                 G  YL   L +G LL  +L+  +G+L D +   LG++P+
Sbjct: 649  ESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPV 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +     
Sbjct: 709  KLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIST 768

Query: 691  GELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSC 737
              L I  ++ +  +  + + PL   PR  + H +  R           T    S + +  
Sbjct: 769  NTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQM 828

Query: 738  AEE-------------SEM-------------------------HFVRLLDDQTFEFIST 759
            AEE              EM                           +R LD    + + +
Sbjct: 829  AEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFS 888

Query: 760  YPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQ 814
             PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     L+
Sbjct: 889  VPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLE 948

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYV 873
             +   E      +L  F G+LLA   + +++Y     D G +++  +C   H     + +
Sbjct: 949  FMHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNI 1003

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F  
Sbjct: 1004 QAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGN 1062

Query: 934  FTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMR 974
             ++++     TD+            +RG L       E +  +H+GE +   +  +L+  
Sbjct: 1063 LSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-- 1120

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
                  G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS
Sbjct: 1121 -----PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS 1175

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                      KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1176 -----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
 gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
          Length = 1227

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 274/1251 (21%), Positives = 497/1251 (39%), Gaps = 199/1251 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G +  L  FR  G  +D++ + ++  +  +L+++   + L             R    G
Sbjct: 59   FGCVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 239  PGGNDGPSGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +G+
Sbjct: 296  KSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                           P A  + V +++   +  PI+   V D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD ++
Sbjct: 415  LANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C+
Sbjct: 533  --VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---- 591
             +  + E    S   AVG+  D +VRI SL   N +T   +     P    LC  E    
Sbjct: 591  ALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHT 648

Query: 592  ---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
                                 G  YL   L +G LL  +L+  +G+L D +   LG++P+
Sbjct: 649  ESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPV 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +     
Sbjct: 709  KLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIST 768

Query: 691  GELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSC 737
              L I  ++ +  +  + + PL   PR  + H +  R           T    S + +  
Sbjct: 769  NTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQM 828

Query: 738  AEE-------------SEM-------------------------HFVRLLDDQTFEFIST 759
            AEE              EM                           +R LD    + + +
Sbjct: 829  AEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFS 888

Query: 760  YPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQ 814
             PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     L+
Sbjct: 889  VPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLE 948

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYV 873
             +   E      +L  F G+LLA   + +++Y     D G +++  +C   H     + +
Sbjct: 949  FMHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNI 1003

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F  
Sbjct: 1004 QAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGN 1062

Query: 934  FTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMR 974
             ++++     TD+            +RG L       E +  +H+GE +   +  +L+  
Sbjct: 1063 LSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-- 1120

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
                  G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS
Sbjct: 1121 -----PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS 1175

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                      KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1176 -----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
          Length = 1210

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 283/1234 (22%), Positives = 514/1234 (41%), Gaps = 186/1234 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   P+ +T + +G F   +E  +I A  +++ IH   P QG + P+     +
Sbjct: 6    SMFMYNLTIQPPSAITSAVLGQFAGTKEQQIITASGSKLTIHRPDPSQGKISPLFTQDCF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D+L + ++  +  +L++  + +    R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYLIVGSDSGRITILEYVKDQNRF-NRVHLETFGKSGIRRVIPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLD---IKFLYGCA 173
            Q   +DP  R  +I     + L  V+  + + +L  +  +   + Q L    +    G  
Sbjct: 125  QYLAVDPKGRACIIASVEKNKLVYVLNRNAQAELTISSPLEAHKPQTLVFDCVALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  +     T             YE+ L     V   W++  +   A  L 
Sbjct: 185  NPIFAALEVDYTEVDQDPTGQALQEVEKLLVYYELDLGLNHVVRQ-WAEP-VARDATKLF 242

Query: 221  PVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGD 272
             +P     P   GVL+  E+ I Y  +N  AF+  IP R  + +     + +  R+++  
Sbjct: 243  QIPGGSDGP--SGVLVCAEDNITYRHSNQEAFRVPIPRRRGVLE-----NPERKRHIV-- 293

Query: 273  HAGLLH-------LLVITHEKE------------------KVTGLKIELLGETSIASTIS 307
             AG++H       LL+ T + +                  +V  LKI+      +A+++ 
Sbjct: 294  -AGVMHKMKGQFFLLLQTEDGDLFKVTIDMVEDDNGQLTGEVRALKIKYFDTVPVANSLH 352

Query: 308  YLDNAVVYIGSSYGDSQLIKL---------------NLQPDAKGSY------------VE 340
             L +  +++ S  G+    +                +   D   +Y            + 
Sbjct: 353  ILKSGFLFVASESGNHHFYQFEKLGDDDEETEFTSDDYPADPTAAYTPAFFHVRPLSNLN 412

Query: 341  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI 399
            +++      P++D  V +L  +   Q+ +  GA    S + +++G+ ++E    EL    
Sbjct: 413  LVQSVDAANPLLDCKVANLLDEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESELPDKP 472

Query: 400  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 459
            + +W+ + + DD +D ++++SF   T  L +++ + +EE    GF S   TL       +
Sbjct: 473  EAVWTTKLTRDDQYDAYIILSF--RTGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGED 530

Query: 460  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DG 518
             LVQV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG
Sbjct: 531  ALVQVHPKGIRHIRADKR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDG 588

Query: 519  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 576
             L E  +  ++   ++CL +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 589  SLAEYDERREMTGTVTCLSLGDVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQ 647

Query: 577  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
                 P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P 
Sbjct: 648  ALTSAPSALSIMAMADSTSGGTTMYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPA 707

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
             L   S K    V A S RP + Y+  +    + + ++   + ++  F S   P+ +   
Sbjct: 708  KLFRVSVKGQNAVMALSSRPWLGYTDTQTNGFMLTPLDYVPLQYVWNFTSEQCPEGMVGI 767

Query: 689  KEGELTIGTIDDIQK-LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR 747
            +   L I +I+D+ + L   +IPL   PR+         F +    N   A  +    + 
Sbjct: 768  QGQNLRIFSIEDLSRNLLQENIPLPYTPRKFVKHPDQPLFYVIEADNNVLAPATRQKLLN 827

Query: 748  ----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCS 775
                      +L  + F +                      + T  L+  E   SI +  
Sbjct: 828  ESTAVNGDAVILPPEEFGYPKATGHWASCIQVVDPVNTKSVVFTLELEDNECATSITTAP 887

Query: 776  F-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 831
            F S D  V+  VGTA  ++      + G + V+   EDGK L+ I + + +    +L AF
Sbjct: 888  FASQDDEVFLIVGTAKDLVVSPRSFSAGFLHVYRFHEDGKELEFIHKTKVEQPPTALLAF 947

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
             G+LLA +   +++Y     D G +++  +C      L + +QT+G  I+V D+ +S++ 
Sbjct: 948  QGRLLAGVGPDLRIY-----DLGMKQMLRKCQVTTPNLIVGLQTQGSRIIVSDIQESVTY 1002

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE-- 946
             +YK +E  +     D  A W +   ++D +   G +   NL+ +R   K SE A ++  
Sbjct: 1003 CVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFGNLWMLRCPQKVSEEADEDNS 1062

Query: 947  ------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                  ERG       RL ++  Y  G+     +  +LV        G    V +    G
Sbjct: 1063 GVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTNLV-------AGGRDVVFWTGFQG 1115

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKG--VGGLNHEQWRSFNNEKKTVDAKNFLDGD 1050
             +G++   +  E   F + L+  L        + G +H  +RS+    K V     +DGD
Sbjct: 1116 TLGILVPFVSREDVDFFQSLEMQLASSNGNPPLLGRDHLIYRSYYAPSKGV-----IDGD 1170

Query: 1051 LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L E+F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1171 LCETFFLLPNDKKLMIAGELDRSVREIERKISDM 1204


>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
          Length = 1225

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 277/1248 (22%), Positives = 518/1248 (41%), Gaps = 201/1248 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNVFEKIHQETFGKSGCRRIVPGQYLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            L ++                          QP    + V +++   +L PI+   + DL 
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPILCCQIADLA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++V
Sbjct: 417  NEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R  
Sbjct: 477  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDI 537
             NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +
Sbjct: 533  VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPVGQLNEYTERKEMSADVVCMSL 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----- 591
              +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E     
Sbjct: 593  ANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTE 649

Query: 592  -----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +  
Sbjct: 650  KQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQ 709

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++ 
Sbjct: 710  EAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEK 769

Query: 701  IQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------- 740
            +  +  + + PL   PR+ + H E +            T A  + + Q  AEE       
Sbjct: 770  LGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGE 829

Query: 741  ------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYGC 769
                  +EM                           +R+++      +    L+  E   
Sbjct: 830  DERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAF 889

Query: 770  SILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAV 825
            S+  C FS+  + +Y  VG A  L        G  +    +V  G KL+ + +   +   
Sbjct: 890  SVAVCRFSNTGDEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVP 949

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH-------HGHILALY---VQT 875
             ++  F G++L  + + +++Y     D G ++L  +C +         HI A Y   +QT
Sbjct: 950  AAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKCENKILSFLSQKHI-ANYICGIQT 1003

Query: 876  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 935
             G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  
Sbjct: 1004 IGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICV 1063

Query: 936  VR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPD 977
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+     
Sbjct: 1064 VRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI----- 1118

Query: 978  SDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN 1036
               G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+  
Sbjct: 1119 --PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-- 1174

Query: 1037 EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                   KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 1175 ---YFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRTPPEVSKKLEDI 1219


>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
 gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
          Length = 1217

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 273/1241 (21%), Positives = 504/1241 (40%), Gaps = 187/1241 (15%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
            M ++N+++   + T +TH+  G+F   +   +++AK   +E+    P    +  +L   +
Sbjct: 1    MYLYNFIL--QRATGITHAVHGSFAGTKLQEILLAKGKGLELVRPDPNTGKVHTLLQTEV 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G + +L  FR  G ++D+  I ++  +  +L+++   ++L             R    G
Sbjct: 59   FGVVRSLMSFRLTGGSKDYAVIGSDSGRIVILEYNPAKNQLEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D++ +L  +  +   +   L    +    G  
Sbjct: 119  QYLAIDPKGRAVMIGAVEKQKLVYILNRDSEARLTISSPLEAHKSNTLTYHMVGVDVGFE 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    T E A K +    F E     N+        L+  A+ LI V
Sbjct: 179  NPMFACLEIDYEEADTDPTGEAATKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISV 238

Query: 223  P---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 239  PGGNDGPSGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L+    G +  + +  + + V+ +K++       A+ +  L    +++   +G+
Sbjct: 296  KSMYFFLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGN 355

Query: 323  SQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDL 359
              L ++             +  P  +G       R +          +  PI+   V DL
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVMVDDIPSYAPILGCQVADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     S+R++R+G+ ++E A  EL G    +W+++   DD FD +++
Sbjct: 416  ANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   D +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--DTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ 
Sbjct: 533  -VNEWKAPGKKTIMKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMA 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE---- 591
            +  +      S   AVG+  D +VRI SL   + ++   +  + +P +   LC  E    
Sbjct: 592  LGSVPSGEQRSWFLAVGL-ADNTVRIISLDPTDCLSPRSM--QALPSAAESLCIVEMGTV 648

Query: 592  -------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
                         G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     +
Sbjct: 649  ETSSEDDGVTITTGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQ 708

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
             +  V A S R  + Y    +   + ++ + + +   F+S    + +       L I  +
Sbjct: 709  GSEAVLAMSSRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILAL 768

Query: 699  DDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE-- 755
            + +  +  + + PL   P+R    +++    I    + +  EE++    + + D+  E  
Sbjct: 769  EKLGAVFNQITFPLEYTPKRFAIHQETGKLIISETDHNAYTEETKTVRKKQMADEMREAA 828

Query: 756  --------------FIS-TYPLDTF---------------------------------EY 767
                          FI+   P D F                                 E 
Sbjct: 829  GEDEQELANEMADAFINEVLPEDVFSSPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEA 888

Query: 768  GCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVEDGKLQL--IAEKETKGA 824
              S+    F+ D   Y   G A  L    + + G  + V+ V+    QL  +   E   A
Sbjct: 889  VLSLALVRFAVDQKWYVVAGVAKDLQINPKISGGGFIDVYKVDSQTHQLEHMHRTEIDDA 948

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVV 882
              +L  F G+LLA I + +++Y     D G ++L  +C  + HI    + +Q  G  + V
Sbjct: 949  PGALCPFQGRLLAGIGKVLRIY-----DLGKKKLLRKC-ENKHIPNQIVNIQGMGQRVYV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNS 940
             D+ +S+  + YK  E  +   A D +  W+++  +LD D     +   N+  +R   + 
Sbjct: 1003 SDVQESVYCIKYKRAENQLIIFADDTHPRWITSASLLDYDTVATGDKFGNIAILRLPHSV 1062

Query: 941  EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
                DE         +RG L       E +  +HLGE V   +  +L+        G   
Sbjct: 1063 SDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKATLI-------PGGSE 1115

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++I+ T++G +G +      E Y F + L+ ++R     + G +H  +RS+         
Sbjct: 1116 SLIYATMSGTVGALVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSY-----YYPV 1170

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  L   +   I+  +  +  E+ K++E++
Sbjct: 1171 KNVMDGDLCEQFTSLDPAKQKSIASDLGRTPSEVAKKLEDI 1211


>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
 gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
          Length = 1219

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 273/1242 (21%), Positives = 506/1242 (40%), Gaps = 189/1242 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
            ++ Y +T  + T +TH+  GNF+  +   ++I++   +E+    P    +  +L V I+G
Sbjct: 1    MYLYNLTLQRATAITHAIHGNFSGTKMQEIVISRGKSLEVLRPDPNTGKVHTLLTVEIFG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             + +L  FR  G  +DF+ + ++  +  +L++   S     +   +   + G R    GQ
Sbjct: 61   VVRSLMSFRLTGGTKDFVIVGSDSGRIVILEY-IPSKNNFEKVHQETFGKSGVRRIVPGQ 119

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120  YLATDPRGRAVMIGAVEKQKLAYILNRDVQARLTISSPLEAHKSNTLVYHMVGVDVGYDN 179

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
            P    L  D ++A    + E A K +    F E     N+        L+  A+ L+ VP
Sbjct: 180  PMFACLEIDYEEADSDPSGEAAQKTQQTLTFYELDLGVNHVVRKYSEPLEEHANFLVTVP 239

Query: 224  -----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------- 267
                 P   GVLI  E  + Y   N      IR  I +    +D D  R           
Sbjct: 240  GGDDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATHK 294

Query: 268  ------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
                  +L     G +  + +  +++ VT +K++      +AS +  L    +++ S +G
Sbjct: 295  TKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVASAMCVLKTGFLFVTSEFG 354

Query: 322  DSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVD 358
            +  L ++             +  P  +G       R +          +L PI+   V D
Sbjct: 355  NHYLYQIAHLGDDDDELEFSSAMPLEEGDTFFFAPRSLRNLVLVDEMESLSPILSCRVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     SLR++R+G+ ++E A  EL G    +W+++  +DD +D ++
Sbjct: 415  LAGEDTPQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDEYDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV  G +R + S  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALSDDALVQVYPGGIRHICSDKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK-HAQLEYEISCL 535
               NEWK+P   ++     N  QV++A  GG L Y E+   G L E K   ++  ++ C+
Sbjct: 533  --VNEWKAPGKKTIVKCAINQRQVVIALSGGELAYFEMDPTGQLHEYKERKRMNADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII-------------- 581
             +  +      S   AVG+  D +VRI SL   + +    + G  +              
Sbjct: 591  ALANVAPGEQLSLFLAVGL-ADSTVRIISLDPSDCLAPRSIQGLPVCAESLCIVEMGCTD 649

Query: 582  --PRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
              P +    +     YL   L +G LL  +L+  +GEL+D +   LG++P+ L     + 
Sbjct: 650  REPDNAAAASTTSTLYLNIGLTNGALLRNVLDPVSGELSDTRTRYLGSRPVKLFRIRMQQ 709

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
            +  V A S R  + Y    +   + ++ + + +   F+S   P+ +       L I  ++
Sbjct: 710  SEAVLAMSSRSWLSYYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALE 769

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKN------------------QSCAE 739
             +  +  + S PL   PR+ I H E +    I +  N                  +  A 
Sbjct: 770  KLGAVFNQVSFPLEYTPRKFIIHPESNNLLIIETEHNAYTEETKKQRRLQMAEEMKEAAG 829

Query: 740  ESEMHFVR-----LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG------- 787
            E E    +      L++   E I + P        S L         V+ C+        
Sbjct: 830  EEEQELAKEMADAFLNEDLPESIFSAPKAGHGMWASTLKIMDPVQGIVHKCIRLEQNEAA 889

Query: 788  -TAYVLPEENEPTKGRILVFIVEDG-----------------------KLQLIAEKETKG 823
             ++ ++  +N+P +   L+  +                          +L+ +       
Sbjct: 890  MSSVLVKFQNQPQQTLFLIVGISKDFQLNPRHCNTGFLDTYKMDPMGRELEFVHRTPVDE 949

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIV 881
               +L A+NG LLA + + ++LY     D G ++L  +C  + HI    + +Q  G  I 
Sbjct: 950  VPMALCAYNGLLLAGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAIVNIQAMGKRIF 1003

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 941
            V D+ +S+ ++ YK  E  +   A D +  W++   +LD D    A+   N+  +R    
Sbjct: 1004 VSDVQESVFMVRYKRAENQLIIFADDTHPRWVTCNCVLDYDTVAVADKFGNIAILRLPPN 1063

Query: 942  GATDEE-----------RGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
             + D E           RG L       + +  +H+GE V   +  +L+        G  
Sbjct: 1064 VSDDVEEDPTGHKSLWDRGLLNGASQKADTIATFHVGETVTWLQKATLI-------PGGW 1116

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
             ++I+ T++G +GV+      E + F + L+ ++R     + G +H  +RS+        
Sbjct: 1117 ESLIYTTLSGSVGVLVPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSY-----YFP 1171

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN +DGDL E +  L   +   I+  ++ +  E+ K++E++
Sbjct: 1172 VKNVIDGDLCEQYNSLEPVKQKSIASDLDRTPAEVSKKLEDI 1213


>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
 gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
          Length = 1227

 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 275/1251 (21%), Positives = 496/1251 (39%), Gaps = 199/1251 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G I  L  FR  G  +D++ + ++  +  +L+++A  + L             R    G
Sbjct: 59   FGCIRALMAFRLTGGTKDYIVVGSDSGRIVILEYNASKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 239  PGGNDGPSGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +G+
Sbjct: 296  KSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                           P A  + V +++   +  PI+   V D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD ++
Sbjct: 415  LANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C+
Sbjct: 533  --VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPSGELNEYTERSEMPAEIMCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---- 591
             +  + +    S   AVG+  D +VRI SL   N +T   +     P    LC  E    
Sbjct: 591  ALGTVPDGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHT 648

Query: 592  ---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
                                 G  YL   L +G LL  +L+  +G+L D +   LG++P+
Sbjct: 649  ESTTQGALDDDAPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPV 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     +    V A S R  + Y    +   + ++ + + +   F+S    + +     
Sbjct: 709  KLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIST 768

Query: 691  GELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSC 737
              L I  ++ +  +  + + PL   PR  + H +  R           T    S + +  
Sbjct: 769  NTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQM 828

Query: 738  AEE-------------SEM-------------------------HFVRLLDDQTFEFIST 759
            AEE              EM                           +R LD    + +  
Sbjct: 829  AEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFN 888

Query: 760  YPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQ 814
             PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     L+
Sbjct: 889  VPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLE 948

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYV 873
             +   E      +L  F G+LLA   + +++Y     D G +++  +C   H     + +
Sbjct: 949  FMHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNI 1003

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F  
Sbjct: 1004 QAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGN 1062

Query: 934  FTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMR 974
             ++++     TD+            +RG L       E +  +H+GE +   +  +L+  
Sbjct: 1063 LSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-- 1120

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
                  G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS
Sbjct: 1121 -----PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS 1175

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                      KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1176 -----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
          Length = 1227

 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 274/1253 (21%), Positives = 499/1253 (39%), Gaps = 203/1253 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G +  L  FR  G  +D++ + ++  +  +L+++   + L             R    G
Sbjct: 59   FGCVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P +  L  D ++A    + + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMLACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
            P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239  PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATH 293

Query: 268  -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +
Sbjct: 294  RTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEF 353

Query: 321  GDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCV 356
            G+  L ++                           P A  + V +++   +  PI+   V
Sbjct: 354  GNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQV 412

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDT 415
             DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD 
Sbjct: 413  ADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDA 472

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
            +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S 
Sbjct: 473  YIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSD 530

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEIS 533
             R   NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI 
Sbjct: 531  KR--VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIM 588

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE-- 591
            C+ +  + E    S   AVG+  D +VRI SL   N +T   +     P    LC  E  
Sbjct: 589  CMALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMG 646

Query: 592  -----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
                                   G  YL   L +G LL  +L+  +G+L D +   LG++
Sbjct: 647  HTESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSR 706

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +   
Sbjct: 707  PVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAI 766

Query: 689  KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQ 735
                L I  ++ +  +  + + PL   PR  + H +  R           T    S + +
Sbjct: 767  STNTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKE 826

Query: 736  SCAEE-------------SEM-------------------------HFVRLLDDQTFEFI 757
              AEE              EM                           +R LD    + +
Sbjct: 827  QMAEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTM 886

Query: 758  STYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GK 812
             + PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     
Sbjct: 887  FSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSS 946

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILAL 871
            L+ +   +      +L  F G+LLA   + +++Y     D G +++  +C   H     +
Sbjct: 947  LEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIV 1001

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F
Sbjct: 1002 NIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKF 1060

Query: 932  NLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLV 972
               ++++     TD+            +RG L       E +  +H+GE +   +  +L+
Sbjct: 1061 GNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI 1120

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                    G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +
Sbjct: 1121 -------PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSY 1173

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            RS          KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1174 RS-----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
            delta SOWgp]
 gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
            delta SOWgp]
          Length = 1209

 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 285/1232 (23%), Positives = 512/1232 (41%), Gaps = 183/1232 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL-TPQG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++IA  +++ IH   + QG ++ +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAIIGQFSGVKEQQIVIASGSKLSIHEPDSHQGKIRTLYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYIIIGSDSGRIAIVEY-VPSQNRFNRIHLETFGKSGIRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LI     + L  V+  + + +L  +  +     Q L         G  
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTLVFALTALDVGYE 184

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  ++    T             YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVDYTESDQDPTGAAYQEAEKLLVYYELDLGLNHVVRR-WA-DPVDRSAAMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       GVL+  E  I Y  +N  AF+  IP R   T+     + +  RY+    A
Sbjct: 243  QVPGGADGPSGVLVCSEGNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---A 294

Query: 275  GLLHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H +                     ++  E  ++TG    LK++      +AS++  L
Sbjct: 295  GVVHKMRRAFFCLLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKLN-----------------------LQP----DAKGSYVEVL 342
             N  +++ S  G+    +                         L P          + ++
Sbjct: 355  KNGFLFVASETGNHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   +L P++   + +L      Q  T SG     + R +++G+ ++E    EL  +   
Sbjct: 415  ESINSLNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D +D ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTRNDQYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSL 590

Query: 521  TEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E  +  ++   ++CL +  +      S   AVG   D +VRI SL PD  L  K     
Sbjct: 591  AEYDEKREMSGTVTCLSLGEVPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQAL 649

Query: 579  EIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG + + L
Sbjct: 650  TSAPSALSIMSMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             + S K    V A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQG 769

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF---- 745
              L I +I+ +   L   +IPL   PR      +   F +    N   +  ++       
Sbjct: 770  QNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDS 829

Query: 746  ------VRLLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSFS 777
                  V  L  + F +                      IS   L+  E   S+ +  FS
Sbjct: 830  KAANGEVAELPPEDFGYPRGTGHWASCIQVVDPINSKAVISRIELEENEAAVSVAAVPFS 889

Query: 778  D-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 831
              D   +  VGT     V P  +  + G I ++   EDGK L+ I + + +   ++L AF
Sbjct: 890  SQDDETFLVVGTGKDMVVYPPSS--SCGFIHIYRFQEDGKELEFIHKTKVESPPHALLAF 947

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSIS 890
             G+LLA I + +++Y     D G ++L  +C       L + +QT+G  I+V D+ +S++
Sbjct: 948  QGRLLAGIGRNLRIY-----DLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQESVT 1002

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 947
             ++YK++E  +   A D  A W +   ++D +   G +   NL+ +R   K SE A ++ 
Sbjct: 1003 YVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEADEDG 1062

Query: 948  RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNG 993
             G   +    +L    NR    SL++     D   IPT I  T              + G
Sbjct: 1063 SGAHLIHERQYLQGAPNRL---SLMVHFYPQD---IPTSIQKTQLVAGGRDILVWTGLQG 1116

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +G++   +  E   F + L+  L      + G +H  +RS+        AK  +DGDL 
Sbjct: 1117 TVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDHLIYRSY-----YAPAKGTIDGDLC 1171

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E++  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1172 ETYFTLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
 gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
 gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
 gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
 gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
          Length = 1227

 Score =  219 bits (557), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 273/1251 (21%), Positives = 497/1251 (39%), Gaps = 199/1251 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G +  L  FR  G  +D++ + ++  +  +L+++   + L             R    G
Sbjct: 59   FGCVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 239  PGGNDGPSGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +G+
Sbjct: 296  KSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                           P A  + V +++   +  PI+   V D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD ++
Sbjct: 415  LANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C+
Sbjct: 533  --VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---- 591
             +  + E    S   AVG+  D +VRI SL   N +T   +     P    LC  E    
Sbjct: 591  ALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHT 648

Query: 592  ---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
                                 G  YL   L +G LL  +L+  +G+L D +   LG++P+
Sbjct: 649  ESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPV 708

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +     
Sbjct: 709  KLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIST 768

Query: 691  GELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSC 737
              L I  ++ +  +  + + PL   PR  + H +  R           T    S + +  
Sbjct: 769  NTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQM 828

Query: 738  AEE-------------SEM-------------------------HFVRLLDDQTFEFIST 759
            AEE              EM                           +R LD    + + +
Sbjct: 829  AEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFS 888

Query: 760  YPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQ 814
             PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     L+
Sbjct: 889  VPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLE 948

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYV 873
             +   +      +L  F G+LLA   + +++Y     D G +++  +C   H     + +
Sbjct: 949  FMHRTDIDEIPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNI 1003

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F  
Sbjct: 1004 QAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGN 1062

Query: 934  FTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMR 974
             ++++     TD+            +RG L       E +  +H+GE +   +  +L+  
Sbjct: 1063 LSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-- 1120

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
                  G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS
Sbjct: 1121 -----PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS 1175

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                      KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1176 -----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
 gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
          Length = 1208

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 292/1241 (23%), Positives = 523/1241 (42%), Gaps = 198/1241 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K + +T +  GNF+  ++  +I AK   +E  LL P      +  +  + +
Sbjct: 1    MYLYSLTLQKSSCITCAVHGNFSGTKQQEIIAAKGKVLE--LLRPDANSGKVHSITTLEV 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDN 117
            +G I  L  FR  G ++D++ I ++  +  +L++   S     +   +   + G R    
Sbjct: 59   FGEIRCLAPFRLTGGSKDYVVIGSDSGRITILEY-IPSKNTFEKIHQETFGKSGCRRIVP 117

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAFNIRLEELQVLDIKFLY 170
            GQ   +DP  R  +IG      L  ++  D   +L      EA         V+ I    
Sbjct: 118  GQYLAVDPKGRAVMIGAMEKQKLVYILNRDTSARLTISSPLEAHKSHTVVFSVVGIDV-- 175

Query: 171  GCAKPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLL 219
            G   P    L  D ++A +  T E AL  +    + E     N+        L + +++L
Sbjct: 176  GFENPVFACLEVDYEEADNDPTGEAALTTRQMLTYYELDLGLNHVVRKFTETLQDFSNML 235

Query: 220  IPVP---PPLCGVLIIGEETIVYCSANAFKAIPIR-PSITKAYGRVDAD---------GS 266
            IPVP       G+L+  E  I Y   N      IR P   + Y   D D         G 
Sbjct: 236  IPVPGGNDGPSGILVCSENFITY--KNFGDQPDIRMPIPRRRYDLSDPDRGILFVCYAGH 293

Query: 267  R------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
            +      + + +  G +  L +T E + V+ +K++      +AS++  L    ++  S +
Sbjct: 294  KTKSLFFFFIQNEQGDIFKLTLTVEDDMVSSIKLKYFDTIPVASSMIVLKTGFLFASSEF 353

Query: 321  GDSQLIKL--------------------------NLQPDAKGSYVEVLERYVNLGPIVDF 354
            G+  L ++                          +L+P    + VEV E   +L PI   
Sbjct: 354  GNHHLYQIAHLGDNDEETEFSSTMLLDEGETFYYSLRP--LKNLVEVDE-VDSLCPITGC 410

Query: 355  CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPF 413
             V DL  +   Q+    G   + +LRI+R+G+ + E A  EL G   G+W++++S    +
Sbjct: 411  QVADLANEDTPQLYVSCGRGPNSTLRILRHGLEVTEMAVSELPGNPNGVWTVKTSASAEY 470

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            D ++VVSF++ T +L++   + +EE    GF   T TL C     + L+QV +  +R V 
Sbjct: 471  DAYIVVSFVNATLVLSIG--ESVEEVSDSGFLGTTPTLHCCQIGDDALLQVYANGIRHVR 528

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYE 531
            +  R   NEWK+P    ++    N  QV +A  GG LVY E+   G L E  +  +   E
Sbjct: 529  ADKR--VNEWKAPGKKIISKCAVNNRQVAIALTGGELVYFEMDLSGQLNEYTERREFSSE 586

Query: 532  ISCLDIN--PIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLC 588
            + C+ I   P+GE     +  AVG+  D +VR+ SL P   L          +P S+ + 
Sbjct: 587  VICMSIGSVPVGEK--RCRFLAVGL-ADHTVRMISLDPSDCLQPMSMQALPTVPESLCIV 643

Query: 589  AF---------EGI---SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            A          +G+    YL   L +G LL  +L+  TG+++D +   LG++P+ L    
Sbjct: 644  AMGSGDSSESEQGVLSTYYLNIGLQNGVLLRSVLDSVTGDMSDTRTRYLGSRPVRLFKVK 703

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
             +N+  V A S R  + Y        + ++   + +   F+S   P+ +       L I 
Sbjct: 704  IQNSEAVLAISSRSWLGYMFQSVSRLTPLSYDALDYASGFSSDQCPEGVVSIAGDTLRIL 763

Query: 697  TIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAIC------------SLKNQSCA----- 738
             ++ +  +  + +I L   PRR    +Q+    +             S + Q  A     
Sbjct: 764  ALEKLGAVFNQMTINLKLTPRRFAIDQQNSNLVVVGSDHLCFTDSTKSERKQQMAKEIIE 823

Query: 739  ----EESEM------HFVR------------------------LLDDQTFEFISTYPLDT 764
                EE+E+       F+                         L  DQ+ E      LD 
Sbjct: 824  SAGDEEAELAKEVAESFMNEVLPATEFGEPKAGNGQWASCIQLLAPDQSLE------LDQ 877

Query: 765  FEYGCSILSCSFS-DDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVEDGKLQLIAEKETK 822
             E   S+  C F+      +  VG A  L      + G ++  + + +G+L+L+ +   +
Sbjct: 878  DEAALSVAICRFAYKPDETFVVVGVAKELNLNPSSSSGGLMNTYRMANGQLELVHKTVVE 937

Query: 823  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIV 881
                ++ AF G+LL    + +++Y     D G ++L  +C +      +  + + G  ++
Sbjct: 938  EVPRAMAAFQGRLLVGTGRILRVY-----DLGRKKLLRKCENKNFPYRIVTISSMGSRVI 992

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD-DDIYLGAENNFNLFTVRKNS 940
            VGD+ +S+  + Y+ +E  +   A D +  +++A   LD D I +G  + F    + + S
Sbjct: 993  VGDVQESVHFVKYRAKENRLVVFADDVSPRYVTATCFLDYDTIAVG--DKFGSIAILRLS 1050

Query: 941  EGATDE------------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTV 986
            +   DE            +RG L   G          F  G  VM L  + +  G   ++
Sbjct: 1051 DDINDEIEEDPTGAKAFWDRGLLN--GASQKANLEASFYIGETVMSLQKTTIIPGGSESL 1108

Query: 987  IFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            I+ T++G IGV+  LP    E+  F + L+ +LR     + G +H  +RS+        A
Sbjct: 1109 IYTTLSGSIGVL--LPFTSREEVDFFQHLEMHLRSENAPICGRDHLAYRSY-----YFPA 1161

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGD+ E F  L  ++   ++  ++ +  E+ K++E++
Sbjct: 1162 KNVIDGDMCEQFNALDGSKRRTLAMELDRTPPEISKKLEDM 1202


>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
            mulatta]
 gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
            mulatta]
          Length = 1199

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 276/1227 (22%), Positives = 510/1227 (41%), Gaps = 197/1227 (16%)

Query: 21   VGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIATLELFRPHGEAQDFL 78
            +  F  P +  +++++   +E+    P    +  +L V ++G I +L  FR  G  +D++
Sbjct: 1    MATFLEPNQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGGTKDYI 60

Query: 79   FIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIIDPDCRLIGLHLYDG 137
             + ++  +  +L++   S  +  +   +   + G R    GQ   +DP  R + +   + 
Sbjct: 61   VVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMISAIEK 119

Query: 138  --LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIVVLYQDNKDARHVKT 192
              L  ++  D   +L  +  +   +   L    +    G   P    L  D ++A +  T
Sbjct: 120  QKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPT 179

Query: 193  YEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP-----PPLCGVLIIGEET 236
             E A   +    F E     N+        L+   + LI VP     P   GVLI  E  
Sbjct: 180  GEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGP--SGVLICSENY 237

Query: 237  IVYCSANAFKAIPIRPSITKAYGRVDADGSR-----------------YLLGDHAGLLHL 279
            I Y   N      IR  I +    +D D  R                 +L     G +  
Sbjct: 238  ITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKSMFFFLAQTEQGDIFK 294

Query: 280  LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN---------- 329
            + +  +++ VT ++++      +A+ +  L    +++ S +G+  L ++           
Sbjct: 295  ITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPE 354

Query: 330  --------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAY 374
                           QP    + V +++   +L PI+ FC + DL  +   Q+    G  
Sbjct: 355  FSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADLANEDTPQLYVACGRG 412

Query: 375  KDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
               SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   
Sbjct: 413  PRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG-- 470

Query: 434  DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 493
            + +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++  
Sbjct: 471  ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVK 528

Query: 494  ATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAA 551
               N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  A
Sbjct: 529  CAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 588

Query: 552  VGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GIS 594
            VG+  D +VRI SL   + +  + L  + +P +   LC  E                G  
Sbjct: 589  VGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFL 645

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + Y
Sbjct: 646  YLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSY 705

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGE 713
            S   +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL  
Sbjct: 706  SYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQY 765

Query: 714  HPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM----- 743
             PR+ + H E +            T A  + + Q  AEE             +EM     
Sbjct: 766  TPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFL 825

Query: 744  --------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 783
                                  +R+++      +    L+  E   S+  C FS+    +
Sbjct: 826  NENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDW 885

Query: 784  YC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            Y  VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  +
Sbjct: 886  YVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGV 945

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKH 896
             + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK 
Sbjct: 946  GKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKR 998

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE-------- 946
             E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE        
Sbjct: 999  NENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKAL 1058

Query: 947  -ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
             +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++
Sbjct: 1059 WDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGIL 1111

Query: 999  ASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
                 HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  
Sbjct: 1112 VPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNS 1166

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +   +   +S+ ++ +  E+ K++E++
Sbjct: 1167 MEPNKQKNVSEELDRTPPEVSKKLEDI 1193


>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis domestica]
          Length = 1202

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 276/1232 (22%), Positives = 511/1232 (41%), Gaps = 192/1232 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSREKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDN--KDARHVKTYEVALKDKDFVEGPWSQNN---LDNGADLLIPVPPPLCGVLII 232
              L  D   K+   ++  +      D     +   N   L  G+D          GVLI 
Sbjct: 183  ACLEMDYEVKEGTGLENKDKKFGGVDVTHPSYMIQNVTILPGGSD-------GPSGVLIC 235

Query: 233  GEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------------YLLGD--HA 274
             E  I Y   N      IR  I +    +D D  R                + LG     
Sbjct: 236  SENYITY--KNFGDQPDIRCPIPRRRKELD-DPERGKIFVCSATPKNKSMFFFLGQTGQG 292

Query: 275  GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN----- 329
             +  + + T E   VT ++++      +A+ +  L    +++ S +G+  L ++      
Sbjct: 293  DIFQITLETDENMGVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDD 352

Query: 330  -------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVT 369
                                QP    + V +++   +L PI+ FC + DL  +   Q+  
Sbjct: 353  DEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADLANEDTPQLYV 410

Query: 370  CSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRIL 428
              G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L
Sbjct: 411  ACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVL 470

Query: 429  AMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPG 488
            ++   + +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P  
Sbjct: 471  SIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGK 526

Query: 489  YSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSY 546
             ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      
Sbjct: 527  KTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQR 586

Query: 547  SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE-------------- 591
            S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E              
Sbjct: 587  SRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGAEKQDELGERG 643

Query: 592  --GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
              G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R
Sbjct: 644  SIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSR 703

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-S 708
              + YS   +   + ++ + +     F S   P+ +       L I  ++ +  +  + +
Sbjct: 704  SWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVA 763

Query: 709  IPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM 743
             PL   PR+ + H E +            T A  + + Q  AEE             +EM
Sbjct: 764  FPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEM 823

Query: 744  -------------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
                                       VR+++      +    L+  E   S+  C FS+
Sbjct: 824  AAAFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSN 883

Query: 779  DSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGK 834
              + +Y  VG A  L        G  +    +V  G KL+ + +   +    ++  F G+
Sbjct: 884  TGDDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGR 943

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISL 891
            +L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   
Sbjct: 944  VLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIW 996

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--- 946
            + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE   
Sbjct: 997  VRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 1056

Query: 947  ------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                  +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G
Sbjct: 1057 GNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSG 1109

Query: 994  VIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG++     HE + F + ++ +LR     + G +H  +RS+         KN +DGDL 
Sbjct: 1110 GIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLC 1164

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1165 EQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1196


>gi|402592185|gb|EJW86114.1| CPSF A subunit region family protein [Wuchereria bancrofti]
          Length = 278

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 110/265 (41%), Positives = 170/265 (64%), Gaps = 6/265 (2%)

Query: 804  LVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            ++F   +G  +++L+ EKE KGA YS+ + +GKL+ A+N  ++L++W       +EL+ E
Sbjct: 1    MMFQASEGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWT----ADKELRLE 56

Query: 862  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 921
            C    ++ ALY++T+ D I+VGDLM+S+SLL YK  E   E+ ARD+  NWMSA EI+D 
Sbjct: 57   CSDFDNVTALYLKTKNDLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDS 116

Query: 922  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 981
            D +LGAEN++NLFTV K+S     EE  RL+ +G ++LGE VN F HGSL     D    
Sbjct: 117  DNFLGAENSYNLFTVMKDSFTVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVAPL 176

Query: 982  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
               ++++GT +G IGVI  +P   Y FL+ +Q  L +  +    ++H Q+R+F  EK++ 
Sbjct: 177  YHSSILYGTSDGGIGVIVQMPPVLYTFLQDVQKRLAEYAENCMRISHTQYRTFETEKRSE 236

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEI 1066
                F+DGDLIES LD+ +  ++++
Sbjct: 237  APNGFIDGDLIESLLDMGKDSVEQV 261


>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
          Length = 1122

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 265/1188 (22%), Positives = 495/1188 (41%), Gaps = 184/1188 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298  MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
            L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358  LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416  ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
            +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592  LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649  EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709  QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700  DIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFIS 758
             +  +  + + PL   PR+     +S    I    + +  E ++    +           
Sbjct: 769  KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQ----------- 817

Query: 759  TYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAE 818
                        ILS        VY      Y L    E              KL+ + +
Sbjct: 818  -----------QILSPRSVAGGFVY-----TYKLVNNGE--------------KLEFLHK 847

Query: 819  KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQT 875
               +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   +QT
Sbjct: 848  TPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQT 900

Query: 876  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 935
             G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  
Sbjct: 901  IGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICV 960

Query: 936  VR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPD 977
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+     
Sbjct: 961  VRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI----- 1015

Query: 978  SDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN 1036
               G   ++++ T++G IG++     +E + F + ++ +LR     + G +H  +RS+  
Sbjct: 1016 --PGGSESLVYTTLSGGIGILVPFTSYEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-- 1071

Query: 1037 EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                   KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1072 ---YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1116


>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
          Length = 1271

 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 279/1252 (22%), Positives = 525/1252 (41%), Gaps = 205/1252 (16%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            +++ Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++
Sbjct: 50   TMFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLIVEVF 109

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  ++++ + ++  +  +L++   S  +  +   +   + G R    G
Sbjct: 110  GVIRSLMAFRVTGGTKEYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPG 168

Query: 119  QIGIIDPDCRLIGL---HLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL-------DIKF 168
            Q   +DP  R + +   H    L  ++  D   +L  +  +   +   L       D+ F
Sbjct: 169  QFLAVDPKGRAVMISKCHEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGF 228

Query: 169  ---LYGCAK---------PTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGA 216
               ++ C +         P I          + +  YE+ L     V   +S+  L+   
Sbjct: 229  ENPMFACLEMDYEIFDCMPLISFYATVLCSQQTLTFYELDLGLNHVVRK-YSEP-LEEHG 286

Query: 217  DLLIPVP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---- 267
            + LI VP     P   GVLI  E  I Y   N      IR  I +    +D D  R    
Sbjct: 287  NFLITVPGGSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIF 341

Query: 268  -------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
                         +L     G +  + +  +++ VT ++++      +A+ +  L    +
Sbjct: 342  VCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFL 401

Query: 315  YIGSSYGDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGP 350
            ++ S +G+  L ++                          QP    + V +++   +L P
Sbjct: 402  FVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSP 460

Query: 351  IVDFC-VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSS 408
            I+ FC + DL  +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R  
Sbjct: 461  IL-FCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRH 519

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
             +D FD +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    
Sbjct: 520  IEDEFDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDG 577

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHA 526
            +R + +  R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  
Sbjct: 578  IRHIRADKR--VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERK 635

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSV 585
            ++  ++ C+ +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +  
Sbjct: 636  EMSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPE 692

Query: 586  LLCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
             LC  E                G  YL   L +G LL  +L+  TG+L+D +   LG++P
Sbjct: 693  SLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRP 752

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            + L     +    V A S R  + YS   +   + ++ + +     F S   P+ +    
Sbjct: 753  VKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIS 812

Query: 690  EGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQS 736
               L I  ++ +  +  + + PL   PR+ + H E +            T A  + + Q 
Sbjct: 813  TNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQ 872

Query: 737  CAEE-------------SEM-------------------------HFVRLLDDQTFEFIS 758
             AEE             +EM                           +R+++      + 
Sbjct: 873  MAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLD 932

Query: 759  TYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQ 814
               L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+
Sbjct: 933  LVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLE 992

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-- 872
             + +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y  
Sbjct: 993  FLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYIS 1045

Query: 873  -VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             +QT G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   
Sbjct: 1046 GIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFG 1105

Query: 932  NLFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVM 973
            N+  VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+ 
Sbjct: 1106 NICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI- 1164

Query: 974  RLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
                   G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +R
Sbjct: 1165 ------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFR 1218

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            S+         KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1219 SY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1265


>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1214

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 288/1225 (23%), Positives = 503/1225 (41%), Gaps = 171/1225 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIYGRIA 63
            Y +T   P+ V  + VGNF+  +   +I+++ TR+E+    P    L  +L   ++G + 
Sbjct: 4    YNLTLQAPSAVPQAIVGNFSGARHQEIIVSRGTRLELLKPDPTSGKLTSVLTHDVFGAVR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSE---LITRAMGDVSDRIGRPTDNGQI 120
            +L  FR  G  +D+  + ++  +  +L +D +++E   L T   G       R    GQ 
Sbjct: 64   SLVAFRLTGGTKDYAIVGSDSGRIVILDYDPKANEFKRLYTETYGKSG---ARRIVAGQY 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-----YGCAKP 175
              +DP  R + +   +    V   +         +  LE  +   I F       G   P
Sbjct: 121  LAVDPKGRAVMIAAMEKSKLVYILNRDAATNLTISSPLEAHRNQSILFHITGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
                L  D  ++    T             YE+ L     V   WS+   D  A+ L+ V
Sbjct: 181  LFAALEIDYGESDQDPTGEAFHNAEKMLTFYELDLGLNHVVRK-WSEPT-DPRANFLVQV 238

Query: 223  PPPLC-----------GVLIIGEETIVYCSANAFK---AIPIRPS----------ITKAY 258
            P               GVL+  E  I+Y   +  +    IP R +          I  A 
Sbjct: 239  PGGTSASSPDKFDGPSGVLVCCENHIIYRHMDHPQHRVPIPRRRAPLDSEERGLIIVAAV 298

Query: 259  GRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGS 318
                     +LL    G L+ + I H+ ++VT LKI+      ++S++  L +  +++ S
Sbjct: 299  MHKMKGAFFFLLQSEEGDLYKVTIDHQDDEVTSLKIKYFDTVPVSSSLCILKSGFLFVAS 358

Query: 319  SYGDSQLIKLNLQPD-------AKGSYVE------------------VLERYV------N 347
             +G   L +     D       +  SY +                  +LE  +      +
Sbjct: 359  DFGPHHLYQFQKLGDDDAETEFSSSSYPKNGMADPDEALPSAYFQPRLLENLLLCDSLDS 418

Query: 348  LGPIVDFCVVDLER--QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI-KGMW 403
            + PI+D  V++L        Q     G     S R++R+G+ + E  S +L  GI   +W
Sbjct: 419  INPIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAVW 478

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            + +   DDPFDT++V+SF++ T  L + + + +EE +  GF S   TL       + L+Q
Sbjct: 479  TTKIRADDPFDTYIVLSFVNGT--LVLTIGETIEECQETGFLSAEPTLGVQQIGDDALLQ 536

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 522
            V    +R + +  R   NEWK P G ++  A  N+ QV++A     LVY E+  DG L E
Sbjct: 537  VYPHGIRHILADKRV--NEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLNE 594

Query: 523  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 581
             +  + +   +  L +  + E    +   AVG   D +VRI SL   N +    L     
Sbjct: 595  YQDRKAMGSVVLALSMAEVPEGCQRTPYLAVGC-EDQTVRIISLDPDNTLETISLQALTA 653

Query: 582  PRSVLL------CAFEGIS---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
            P S +        A   IS   ++   L +G  L  +L+  TGELTD +   LGT+PI L
Sbjct: 654  PPSAICIVAMIDAAVNKISETLFVNIGLTNGLFLRTVLDPVTGELTDTRTRFLGTRPIRL 713

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
               +      + A S R  + Y+  + L  + +    + ++  F +   PD     K   
Sbjct: 714  NRVTIAGKPALLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGST 773

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH------- 744
            + I  I  I Q+L    +PL   PR+I     +  F I    +++ ++E+ +H       
Sbjct: 774  IKIFQITKIGQRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEA-VHGALQQPD 832

Query: 745  ----------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 776
                                         VR+++      I    LD  E   SI    F
Sbjct: 833  LKKYDRDVLELPPEVFGHPRAPAGIWASCVRIVNPVELTTIYRLDLDNNEAAFSIALVPF 892

Query: 777  S-DDSNVYYCVGT---AYVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 830
            S  D+ +   VGT   A++ P     T G +  + +++DG+ L+L+ + E      SL A
Sbjct: 893  SARDNELTLVVGTAKDAFLAPRSC--TSGYLRTYRVLDDGRGLELLHKTECDDIPLSLLA 950

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSI 889
            F GKL+A I + +++Y     D G ++L  +        A+  + T+G  I+ GD  +SI
Sbjct: 951  FQGKLVAGIGKCLRIY-----DMGKKKLLRKAESKLFTTAITSLSTQGARIIAGDAQQSI 1005

Query: 890  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEGATDE 946
               +YK  E  +   A D    W ++  +LD +  +  +   N+F  R +   S    D+
Sbjct: 1006 FFCVYKAAENRLLVFADDSQQRWTTSQLMLDYNTVVAGDKFGNVFVNRLSDHVSNLVDDD 1065

Query: 947  ERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVI 998
              G      +   +G  H    +  F  G ++M L  + +  G    +++  ++G IG++
Sbjct: 1066 PTGAGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQRTSLVPGGREVIVYFGLHGTIGML 1125

Query: 999  ASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
                 ++ + F   L+ ++R     +   +   WR +      V  K  +DGDL E F  
Sbjct: 1126 VPFASKEDVDFFTTLEQHMRSENLSLVSRDILAWRGY-----YVPVKAVVDGDLCEYFAK 1180

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVE 1082
            L + +   ++  ++ +V E+ K++E
Sbjct: 1181 LPQGKQGGLAGELDRTVGEVLKKLE 1205


>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
 gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
          Length = 1225

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 278/1253 (22%), Positives = 493/1253 (39%), Gaps = 205/1253 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEILLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G I  L  FR  G  +D++ + ++  +  +L++    + L             R    G
Sbjct: 59   FGCIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPAKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D +++    T + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMFACLEIDYEESDLDPTGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
            P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239  PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATH 293

Query: 268  -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +LL    G +  + +  + + V+ +K++       AS +  L    +++ S +
Sbjct: 294  RTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPASAMCVLKTGFLFVASEF 353

Query: 321  GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
            G+  L ++             +  P  +G       R +          +  PI+   V 
Sbjct: 354  GNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRTLKNLVLVDELPSFAPIITSQVA 413

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
            DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD +
Sbjct: 414  DLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAY 473

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  
Sbjct: 474  IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDK 531

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
            R   NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C
Sbjct: 532  RV--NEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMC 589

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE--- 591
            + +  + +    S   AVG+  D +VRI SL   N +T   +     P    LC  E   
Sbjct: 590  MALGTVPDGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGH 647

Query: 592  -----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
                                   G  YL   L +G LL  +L+  +G+L D +   LG++
Sbjct: 648  TESTTSAGALDDDAPPQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSR 707

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ L     +    V A S R  + Y    +   + ++ + + +   F+S    + +   
Sbjct: 708  PVKLFRIKMQGAEAVLAMSSRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAI 767

Query: 689  KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKN------------ 734
                L I  ++ +  +  + + PL   PR  + H +  R     +  N            
Sbjct: 768  STNTLRILALEKLGAVFNQVAFPLQFTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKE 827

Query: 735  ------QSCAEESEMHFVRLLDDQTFEFIS-TYPLDTFEY--------GCSILSC----- 774
                  +S A + E    R + +    FI+   P D F          G S + C     
Sbjct: 828  QMAEEMRSAAGDEERELAREMANA---FINEVLPEDVFSAPKAGAGVCGASQIRCPGTPC 884

Query: 775  -------------------SFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GK 812
                               S + D   Y  VG A  L      ++G  L     D     
Sbjct: 885  MGQTMFKTRAIMSMAMVKFSVAADGRYYLAVGIARDLQLNPRISQGGCLDIYKIDPTCSS 944

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILAL 871
            L+ +   E      +L  F G+LLA   + +++Y     D G +++  +C   H     +
Sbjct: 945  LEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIV 999

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             +Q  G  + V D+ +S+  L Y+  E  +   A D +  W++A  +LD D  +   + F
Sbjct: 1000 NIQAMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKF 1058

Query: 932  NLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLV 972
               ++++     TD+            +RG L       E +  +H+GE +   +  +L+
Sbjct: 1059 GNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI 1118

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                    G    +I+ T+NG +G        E Y F + L+ ++R     + G +H  +
Sbjct: 1119 -------PGGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSY 1171

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            RS          KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1172 RS-----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1219


>gi|156051126|ref|XP_001591524.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980]
 gi|154704748|gb|EDO04487.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1147

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 260/1074 (24%), Positives = 453/1074 (42%), Gaps = 146/1074 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y +T + PT +T + +G F   +E  ++ A  +R+ +H   P QG +   L   ++G I 
Sbjct: 10   YSLTINPPTAITQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIITALSHDVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             +  FR  G  +D++ I ++  +  ++++    ++     +        R    GQ   +
Sbjct: 70   AIAAFRLAGSNKDYIIITSDSGRITIVEFIPAQNKFNRLHLETFGKSGVRRVVPGQYLAV 129

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  L      + L  V+  +++ +L  +  +   + Q L    +    G A P   
Sbjct: 130  DPKGRACLTASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYANPVFA 189

Query: 179  VLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVPPP 225
             L  D  ++    T             YE+ L     V   WS + +D  A++L  VP  
Sbjct: 190  ALEVDYGESDQDPTGQAYEDIEKQLVYYELDLGLNHVVRK-WS-DPVDRTANILFQVPGG 247

Query: 226  L---CGVLIIGEETIVYCSAN--AFK-AIPIRPSITKAYGRVD--ADGSRYLLGDHAGLL 277
                 GVL+ GE+ I Y  +N  AF+ AIP R   T+   R      G  + L   AG  
Sbjct: 248  TDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRRGATEDPQRKRNIVAGVMHKLKGAAGAF 307

Query: 278  HLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
              L+ T + +                  +V  LKI+      +A+++  L +  +++ S 
Sbjct: 308  FFLLQTDDGDLFKITIEMVEDDNGQPTGEVKRLKIKYFDTVPVAASLCILKSGFLFVASE 367

Query: 320  YGDSQLIKLNLQPD---------------AKGSYVEV------------LERYVNLGPIV 352
            +G+ Q  +     D                  SY  V            +E   ++ P++
Sbjct: 368  FGNHQFYQFEKLGDDDEEIEFVSDDFPTGTNESYTPVYFHPRPAENLSLVESIDSMNPLM 427

Query: 353  DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDD 411
            D  V +L  +   Q+ +  G     + R +++G+ ++E    EL G+   +W+ + + +D
Sbjct: 428  DCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRND 487

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             +D ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +R 
Sbjct: 488  VYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRH 545

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLE 529
            + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  ++ 
Sbjct: 546  IRADRR--VNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMS 603

Query: 530  YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLC 588
              ++CL +  + E    SQ  AVG   D +VRI SL PD  L  K        P ++ + 
Sbjct: 604  GTVTCLSLGEVPEGRQRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSPPNALSIM 662

Query: 589  AFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
            A    S      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S +  T 
Sbjct: 663  AMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVSVQGQTA 722

Query: 643  VFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+ 
Sbjct: 723  VLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSIEK 782

Query: 701  I-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF----- 754
            +   L   SIPL   PRR     +   F +    N   +  ++    +LL+D +      
Sbjct: 783  LTNNLLQESIPLTYTPRRFVRHPEHPLFYVVEADNNILSPATKQ---KLLEDPSVVNGDA 839

Query: 755  ------EFISTYPLDTFEYGCSI-----------LSCSFSDDS----------------N 781
                  EF   YP  T  +   I           L+    +D+                 
Sbjct: 840  TVLPAEEF--GYPRGTNHWASCISVVDPVTEKKVLATIHLEDNESAVSVAVVAFASQEDE 897

Query: 782  VYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
             +  VGT   ++      + G I V+   EDGK L+ I + + +    +L AF G+LLA 
Sbjct: 898  TFLVVGTGKDLVVSPRSSSAGFIHVYRFHEDGKELEFIHKTKVEEPPMALLAFQGRLLAG 957

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + + +++Y   +R    R+ QSE   +   + + +QT+G  I+V D+ +SI++++YK +E
Sbjct: 958  VGKDLRIYDLGMR-QLLRKAQSEIAPN---MIVGLQTQGSRIIVSDVQESITMVVYKFQE 1013

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG 949
              +     D  A W S   ++D +   G +   NL+ +R   K SE A +E  G
Sbjct: 1014 NRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNLWLLRCPPKASEEADEEGSG 1067


>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
 gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
          Length = 1227

 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 273/1247 (21%), Positives = 497/1247 (39%), Gaps = 191/1247 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E+    P    +  ++   I+G
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I  L  FR  G  +D++ + ++  +  +L++   S   + +   +   + G R    GQ
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEY-MPSKNALEKVHQETFGKSGCRRIVPGQ 119

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120  YFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDN 179

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
            P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ VP
Sbjct: 180  PMFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVP 239

Query: 224  -----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------- 267
                 P   GVLI  E  + Y   N      IR  I +    +D D  R           
Sbjct: 240  GGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHR 294

Query: 268  ------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
                  +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +G
Sbjct: 295  TKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFG 354

Query: 322  DSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVV 357
            +  L ++                           P A  + V +++   +  PI+   V 
Sbjct: 355  NHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQVA 413

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
            DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD +
Sbjct: 414  DLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAY 473

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  
Sbjct: 474  IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDK 531

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
            R   NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C
Sbjct: 532  R--VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMC 589

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE--- 591
            + +  + E    S   AVG+  D +VRI SL   N ++   +     P    LC  E   
Sbjct: 590  MALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLSPCSMQALPSPAES-LCLVEMGH 647

Query: 592  ----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                                  G  YL   L +G LL  +L+  +G+L D +   LG++P
Sbjct: 648  TESTTNAGADDDVPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRP 707

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            + L     +    V A S R  + Y    +   + ++ + + +   F+S    + +    
Sbjct: 708  VKLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIS 767

Query: 690  EGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKN------------- 734
               L I  ++ +  +  + + PL   PR  + H +  R     +  N             
Sbjct: 768  TNTLRILALEKLGAVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNARKEQ 827

Query: 735  -----QSCAEESEMHF-------------------------------VRLLDDQTFEFIS 758
                 +S A E E                                  +R LD    + + 
Sbjct: 828  MAEEMRSAAGEEERELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMF 887

Query: 759  TYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKL 813
            T PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     L
Sbjct: 888  TVPLTQNEAIMSMAMLKFSVAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSAL 947

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALY 872
            + +   E +    +L  F G+LLA   + +++Y     D G +++  +C   H     + 
Sbjct: 948  EFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVN 1002

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F 
Sbjct: 1003 IQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFG 1061

Query: 933  LFTVRKNSEGATDE------------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
              ++++     TD+            +RG L   G     E +  F  G ++M L  + +
Sbjct: 1062 NLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLS--GASQKSENICSFHVGEIIMSLQKATL 1119

Query: 981  --GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 1037
              G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS    
Sbjct: 1120 IPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS---- 1175

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                  KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1176 -SYYPVKNVLDGDLCEQYLSIDAVKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
 gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
          Length = 1228

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 277/1256 (22%), Positives = 494/1256 (39%), Gaps = 208/1256 (16%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEILLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G I  L  FR  G  +D++ + ++  +  +L++    + L             R    G
Sbjct: 59   FGCIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPAKNALEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119  QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D +++    T + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179  NPMFACLEIDYEESDLDPTGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223  P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
            P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239  PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATH 293

Query: 268  -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +LL    G +  + +  + + V+ +K++       AS +  L    +++ S +
Sbjct: 294  RTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPASAMCVLKTGFLFVASEF 353

Query: 321  GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
            G+  L ++             +  P  +G       R +          +  PI+   V 
Sbjct: 354  GNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRTLKNLVLVDELPSFAPIITSQVA 413

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
            DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD +
Sbjct: 414  DLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAY 473

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  
Sbjct: 474  IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDK 531

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
            R   NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C
Sbjct: 532  R--VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMC 589

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE--- 591
            + +  + +    S   AVG+  D +VRI SL   N +T   +     P    LC  E   
Sbjct: 590  MALGTVPDGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGH 647

Query: 592  -----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
                                   G  YL   L +G LL  +L+  +G+L D +   LG++
Sbjct: 648  TESTTSAGALDDDAPPQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSR 707

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ L     +    V A S R  + Y    +   + ++ + + +   F+S    + +   
Sbjct: 708  PVKLFRIKMQGAEAVLAMSSRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAI 767

Query: 689  KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKN------------ 734
                L I  ++ +  +  + + PL   PR  + H +  R     +  N            
Sbjct: 768  STNTLRILALEKLGAVFNQVAFPLQFTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKE 827

Query: 735  ------QSCAEESEMHFVRLLDDQTFEFIS-TYPLDTFE-------------------YG 768
                  +S A + E    R + +    FI+   P D F                    +G
Sbjct: 828  QMAEEMRSAAGDEERELAREMANA---FINEVLPEDVFSAPKAGLGLWASQIRCLDAMHG 884

Query: 769  CSILSCSFSD----------------DSNVYYCVGTAYVLPEENEPTKGRILVFIVED-- 810
             ++ S S +                 D   Y  VG A  L      ++G  L     D  
Sbjct: 885  QTMFSVSLTQNEAIMSMAMVKFSVAADGRYYLAVGIARDLQLNPRISQGGCLDIYKIDPT 944

Query: 811  -GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHI 868
               L+ +   E      +L  F G+LLA   + +++Y     D G +++  +C   H   
Sbjct: 945  CSSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPY 999

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
              + +Q  G  + V D+ +S+  L Y+  E  +   A D +  W++A  +LD D  +   
Sbjct: 1000 QIVNIQAMGHRVYVSDVQESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIA 1058

Query: 929  NNFNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHG 969
            + F   ++++     TD+            +RG L       E +  +H+GE +   +  
Sbjct: 1059 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1118

Query: 970  SLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
            +L+        G    +I+ T+NG +G        E Y F + L+ ++R     + G +H
Sbjct: 1119 TLI-------PGGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDH 1171

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              +RS          KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1172 LSYRS-----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1222


>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
 gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
          Length = 1209

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 289/1233 (23%), Positives = 520/1233 (42%), Gaps = 185/1233 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL-TPQG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F   +E  ++IA  +R+ IH   + QG ++ +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAIIGQFAGIKEQQIVIASGSRLSIHEPDSHQGKIRALYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ I ++  +  ++++   S     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSNKDYIIIGSDSGRITIVEY-VPSQNRFNRIHLETFGKSGIRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
            Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTIVFALTALDVGYE 184

Query: 169  --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
              ++G  +       QD   + + ++      YE+ L     V   W +  +D  A +L 
Sbjct: 185  NPIFGALEVEYTESDQDPTGSAYEESEKLLVYYELDLGLNHVVRK-WVEP-VDRTAMMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHA 274
             VP       GVL+  E  I Y  +N   F+  IP R   T+     + D  RY+    A
Sbjct: 243  QVPGGADGPSGVLVCAEGNITYRHSNQDVFRVPIPRRSGPTE-----NPDRKRYIT---A 294

Query: 275  GLLHLL---------------------VITHEKEKVTG----LKIELLGETSIASTISYL 309
            G++H +                     ++  +  + TG    LK++      IAS++  L
Sbjct: 295  GVVHKMRRAFFCLLQTEDGDLFKVTIDMVEDDNGQPTGEVRRLKLKYFDTVPIASSLCIL 354

Query: 310  DNAVVYIGSSYGDSQLIKLN--------------------LQPDAKGSY-------VEVL 342
             N  +++ S  G+    +                      L+P A   +       + ++
Sbjct: 355  KNGFLFVASENGNHHFYQFEKLGDDDEETEFTSDDFSSDPLEPLAPVYFRPRPAENLNLV 414

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KG 401
            E   ++ P++   V +L      Q+ T  G     + R +++G+ ++E    EL  +   
Sbjct: 415  ESINSVNPLMSCKVANLTEDDAPQLYTLCGTGARSTFRTLKHGLEVSEIVESELPSVPSA 474

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W+ + + +D +D ++++SF + T +L++   + +EE    GF S   TL       + L
Sbjct: 475  VWTTKLTRNDQYDAYIILSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSL 532

Query: 462  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 520
            +QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L
Sbjct: 533  IQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSL 590

Query: 521  TEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 578
             E  +  ++   ++CL +  I      S   AVG   D +VRI SL PD  L  K     
Sbjct: 591  AEYDEKREMSGTVTCLSLGEILPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQAL 649

Query: 579  EIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
               P ++ ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L
Sbjct: 650  TSAPSALSIMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKL 709

Query: 633  RTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             + S K    V A S RP + YS    K  + + ++   +     F+S    + +   + 
Sbjct: 710  FSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQG 769

Query: 691  GELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA----------- 738
              L I +I+ +   L   +IPL   PR      +   F +    N   +           
Sbjct: 770  QNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEHPLFYVIGADNNILSPATKAKLLEDS 829

Query: 739  -----EESEM------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILSCSFS 777
                 E SE+            H+   ++++D   +   +S   L+  E   S+ +  FS
Sbjct: 830  KAVNGEASELPPEDFGYSRGTGHWASCIQVVDPINSKTVLSRIELEENEAAVSVAAVPFS 889

Query: 778  D-DSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFN 832
              D   +  VGT   +   N P+   G I ++   EDGK L+ I + + +    +L AF 
Sbjct: 890  SQDDETFLVVGTGKDM-VVNPPSSSCGYIHIYRFQEDGKELEFIHKTKVESPPQALLAFQ 948

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMKSI 889
            G+LLA I   +++Y     D G ++L  +C     ++   +   QT+G  I+V D+ +S+
Sbjct: 949  GRLLAGIGTNLRIY-----DLGMKQLLRKC--QAEVVPRMIVGLQTQGSRIIVSDVQESV 1001

Query: 890  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE 946
            + ++YK++E  +   A D  A W +   ++D +   G +   NL+ +R   K SE A ++
Sbjct: 1002 TYVVYKYQENRLIPFADDIIARWTTCTTMVDYETVAGGDKFGNLWLLRCPQKASEEADED 1061

Query: 947  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VN 992
              G   +    +L    NR    SL++     D   IPT I  T              + 
Sbjct: 1062 GSGAHLIHERQYLQGAPNRL---SLMIHFYPQD---IPTSIQKTQLVAGGRDILVWTGLQ 1115

Query: 993  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
            G IG+ I  +  E   F + L+  L      + G +H  +RS+        AK  +DGDL
Sbjct: 1116 GTIGMLIPFVSREDVDFFQSLEMQLTSQTPPIAGRDHLIYRSY-----YAPAKGTIDGDL 1170

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             E++  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1171 CETYFTLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
          Length = 1644

 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 279/1226 (22%), Positives = 486/1226 (39%), Gaps = 180/1226 (14%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRIAT 64
            +T   PT +T +  GNFTS Q    I+A+   ++  LL P     L+ ++   ++G I +
Sbjct: 443  LTLSPPTAITAAVYGNFTSAQAQEFIVARGNTLD--LLRPDASGKLERIITTSVFGVIRS 500

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
            +  FR  G   D+L + ++  K  V+Q D  S+   T    +   + G R    GQ    
Sbjct: 501  IIPFRLTGGTHDYLVVGSDSGKIVVIQVDP-STNTFTACQNETYGKTGCRRITPGQYLAS 559

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAFNIRLEELQVLDIKFLYGCAKPT 176
            DP  R  +IG      L  V+  D   +L      EA         V+ +    G   P 
Sbjct: 560  DPKGRALMIGAVEKQKLVYVMNRDASNRLTISSPLEAHRSHTVHFDVVGVDV--GFENPI 617

Query: 177  IVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP- 223
               L  ++ +A    T + A   +            + V   WSQ  +   A+ L+ VP 
Sbjct: 618  FASLELNHAEADIDPTGQAAHTSEKVLVYYELDLGLNHVTRRWSQV-VPRSANKLVAVPG 676

Query: 224  ----PPLCGVLIIGEETIVYCSANAFK---AIPIRPS-----------------ITKAYG 259
                P   GVL+I +  I Y + N      + P+R +                 I     
Sbjct: 677  GNDGP--GGVLVIAQGLIQYQNENHPPLSCSFPLRSTGGPNPVQDERKQGYPMMIVSTAT 734

Query: 260  RVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                D    L+    G L  + + +    V  L+I+      +A  +      +++  S 
Sbjct: 735  HKQRDLFFVLMQSEWGDLFKISLEYAGSSVQKLRIQYFDTIPVALALCITKTGLLFAASE 794

Query: 320  YGDSQLIKL------------------NLQPDAKGSYVEVLERYV------NLGPIVDFC 355
            + +  L +                   + +P+     V  L+         ++ PI    
Sbjct: 795  FSNHYLFQFLSIGEDDDAAQCVSAAENDQEPEIPSFSVRKLKNLAMISNIPSISPITQLL 854

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFD 414
            V D   +   Q+    G     SLRI+R+G+ + E A+  L G+ K +W L+ S  D  D
Sbjct: 855  VDDFANEQTPQLYALCGQGNRSSLRILRHGLPVMEMAASALPGVAKAVWCLKESFTDTCD 914

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             ++VVSF  E   L + + D +EE    G      +L       N ++QV     R +  
Sbjct: 915  KYIVVSF--EDATLVLEIGDTVEEITDSGLLRDHSSLLVALLEDNSMLQVHQNGFRHIRK 972

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
            +  +   EWK+P    +    ANA Q++++  GG ++Y E+G   L E     L +EI+ 
Sbjct: 973  S--QPVTEWKAPGKKIIERCAANARQLVVSLAGGEVIYFELGVNELMEKGKLDLGFEITS 1030

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            LD+  + +        AVG W D SVR+ SL P+     K  L     P ++     +  
Sbjct: 1031 LDVGQVPQGRQRFPFLAVGSW-DNSVRVLSLDPNDLFRQKSTLALTSHPHTLCFSNLQTE 1089

Query: 594  S-----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
            S           +L   L +G      ++  T  L D     LGT+P+ L   + +    
Sbjct: 1090 SAAGSDHTTQCLFLNIGLHNGVFQQTRMDSITAALADSSARFLGTKPVKLFCVTIQGKRA 1149

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI- 701
            + A S R  + Y    +     ++ + + +   F S   P+ LA      + I T+D + 
Sbjct: 1150 ILALSSRAWLSYFYQTRRQLMPLSTEMLHYASSFQSEQCPEGLAALTSEGMKILTLDHLG 1209

Query: 702  -----QKLHIRSIP--LGEHP--RRICHQEQ-----------------SRTFAICSLKNQ 735
                 QK  +R  P  +  HP  RR+   E                  S T  I S + +
Sbjct: 1210 DTFNQQKCFLRYTPRRMVLHPPSRRLIIVESDYGEANAASKQLFGESLSDTPVIASEEPE 1269

Query: 736  SCAEESEMHF---------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-D 779
               +   + +               VR+ D  T E I+ + L+  E+  SI +C F D  
Sbjct: 1270 EDEDRQALLYPRVERSHEPGKWASCVRIFDPITCETIACHELEDNEHTRSITTCVFHDRG 1329

Query: 780  SNVYYCVGTAYVLPEE--NEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLL 836
              V+  +G+   L     + P  G + V+ +VE  +L L+      G  Y++  F G+LL
Sbjct: 1330 GEVFVIIGSVKNLRLHPISSPEGGLLRVYRVVEGSQLVLVHTTPVDGIPYAMIEFQGRLL 1389

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYK 895
             ++ + +++Y     D G R+L  +C +      +  +++ GD I   D+ +SI  + YK
Sbjct: 1390 VSVGKVLRIY-----DLGKRKLLRKCENRYFTSPMIDLKSAGDRIYASDVHESIHFVKYK 1444

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE-------------- 941
             E+  +   A D   ++M++  +LD D   G +   N+F  R  +E              
Sbjct: 1445 AEDNQLITFADDCVPHFMTSSTLLDYDTIAGGDKFGNVFVTRLPAEVSDEIDNPTGNRML 1504

Query: 942  ---GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
               G  +    +LE + ++H+GE +      SLV        G +  +++ T+ G IG +
Sbjct: 1505 WDTGLLNGAPHKLEQIAQFHVGEVITSVLRTSLV-------PGGMEVILYTTILGRIGAL 1557

Query: 999  ASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
                    + F   L+  +R+    + G +H  +RS+      +  KN  DGDL E F  
Sbjct: 1558 VPFTSRDDVDFYTHLEMYMRQEKAPLCGRDHLSYRSY-----FIPVKNVTDGDLCEQFSS 1612

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEE 1083
            L   +   I++ ++ +  E+ K++++
Sbjct: 1613 LGPDKQKNIAEDLDRTPTEVVKKLQD 1638


>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
            yFS275]
 gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1166

 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 272/1193 (22%), Positives = 508/1193 (42%), Gaps = 147/1193 (12%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            S++ Y +TA     V  SCV   T  +   ++IA  +R+ ++ + P    +  M+    Y
Sbjct: 6    SLFLYSLTAQNSNYVQSSCVAQLTGKKAQEIVIATGSRVHVYRIDPNEGRMNLMISQNCY 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT---RAMGDVSDRIGRPTD 116
            G +  +   R  G  +D+L + ++  +F +L++D   ++L++    A G    R   P  
Sbjct: 66   GIVRNIAPLRLTGFKKDYLVLTSDSGRFTILEYDIGKNKLVSVYQEAFGKSGIRRIVP-- 123

Query: 117  NGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YG 171
             G+   +D   R  ++     + L  V+  D++  L  +  +   +   +    +    G
Sbjct: 124  -GEYLALDAKGRAAMVASTEKNKLVYVLNRDSEANLTISSPLEAHKAGTICFDLVGLDTG 182

Query: 172  CAKPTIVVLYQDNKDARH-------------VKTYEVALKDKDFVEGPWSQNNLDNGADL 218
               P    L  +  D  H             +  YE+ L     V+  WS+  +D  A  
Sbjct: 183  YENPIFAALEVEYSDLDHDPLGELYKHSEKVLTYYELDLGLNHVVKR-WSKV-VDRSAYK 240

Query: 219  LIPVP-----PPLCGVLIIGEETIVY---CSANAFKAIPIR----------PSITKAYGR 260
            LI VP     P   GV++I    I Y      + F  IP R          P I  A   
Sbjct: 241  LIRVPGGNDGP--SGVIVISTGWISYRHLQRQSHFVPIPTRETKATTNTALPIIVSAVMH 298

Query: 261  VDADGSRYLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
               D   YLL +  G LL L +   +  +V  L+I+       A+ ++ L + +++ G  
Sbjct: 299  KMRDSFFYLLQNSDGDLLKLTMELDDHSQVKELRIKYFDTIPFAAILNILKSGLLFAGCE 358

Query: 320  YGDSQLIKL------NLQPD---------------AKGSY-------VEVLERYVNLGPI 351
             G+  L +       + +P+                K +Y       + +L+   +L P+
Sbjct: 359  GGNHHLYQFESLAIDDDEPEFSSANFSEEQSKHSPKKLTYKLHPLQNISLLDEIPSLFPL 418

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTD 410
             D  V         Q+ T  G +K+ SLR+++ G+   E    EL G    +W+++   +
Sbjct: 419  TDAIVTRTSTDANSQLYTLCGRHKEASLRLLKRGVSATEVVLSELPGAPIAIWTVKQKLN 478

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            DP+D ++V+SF + T +L++   + +EE    G  S   TL       + +VQ+ S  +R
Sbjct: 479  DPYDKYMVLSFTNGTLVLSIG--ETVEEVLDSGLLSSVSTLNVRQLGRSSVVQIHSKGIR 536

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD--GILTEVKHAQL 528
             +S+ ++E+  EWK+P    +  +  N  Q++++     L Y E+ D  G L E +  +L
Sbjct: 537  CISA-NKEV-TEWKTPADTVITNSAINEQQIVVSLSNDELAYFEMDDEYGQLNEYQERKL 594

Query: 529  -EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL- 586
                ++ L + P+ +    S    +    D +VRI SL     +    +     P S L 
Sbjct: 595  LTSPVTALALGPVPQGSKRSNFLCLAS-EDSTVRIVSLDPYTTLENLSVQALSAPASSLC 653

Query: 587  -----LCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
                 +  +E + YL   L +G  L  ++++ +G+L D +   LG +PI L     +   
Sbjct: 654  MVNMEVTGYETL-YLHIGLSNGVYLRTVVDVTSGQLIDTRTRFLGPRPIRLSPIIVRGKQ 712

Query: 642  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI--- 698
             V A ++R  + YS+ + L  S +    + +   F S   P+ +    +  L I T+   
Sbjct: 713  SVLAIANRSYLSYSNEQTLQVSPLLYSPLEYADSFASHQCPEGIVGIHQNILKIFTVEAT 772

Query: 699  -DDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 756
             DD+++      PL   P+R+  H E    + + S ++   +    +  + + D    + 
Sbjct: 773  HDDLKQ---DVFPLSCTPKRVIKHPELDILYILQSERHCPNSTNEWITVLSIFDMNEKKM 829

Query: 757  ISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE--ENEPTKGRILVFIVEDGKLQ 814
            I      TF      L  +F    N  + V ++ +  +  +   + G + V+ + DG L 
Sbjct: 830  IEGL---TFNEASFDLCYAFFRSRNEGFLVCSSAINYDISKQSCSNGVLRVYSLNDGGLS 886

Query: 815  L--IAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHI 868
            L  I+E ET      L  F+G+L+A +   +++Y    K +LR    R + +        
Sbjct: 887  LKCISETETDSFARVLKPFHGRLIAGVGPFLRVYDLGNKKLLRKSEVRAVPN-------- 938

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
                +QT+G  I+V D   S   +++K E+      A D  A W +A  ++D D  +G +
Sbjct: 939  FITTIQTQGYRIIVTDAQHSAFFVVFKPEDNRYIVFADDCVARWATATAMVDYDTVVGGD 998

Query: 929  NNFNLFTVR--KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT- 985
               NL+ +R  ++     DEE    +++   H   F++   H   +M    + V  IPT 
Sbjct: 999  KFSNLWLLRCPESVSQLADEENSGSKLL---HEKPFLHSSPHKLDLM--AHTFVNDIPTS 1053

Query: 986  -------------VIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                         +++  + G IGV++   + E   F ++L++ LR     + G +H  +
Sbjct: 1054 IQKVQLVEGARDVIMWTGLLGTIGVLSPFVNREDVRFFQQLESLLRAEDLSIVGRDHLAY 1113

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            RS+      V  K  +DGDL E + +L R + + I+  ++ +V E+CK++E+L
Sbjct: 1114 RSY-----YVPVKCVVDGDLCEQYYNLPRDKQESIANELDRTVIEVCKKIEDL 1161


>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
 gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
          Length = 1273

 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 271/1249 (21%), Positives = 503/1249 (40%), Gaps = 194/1249 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E+    P    +  ++   I+G
Sbjct: 46   MYLYNLTLQKGTGVTHAIHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 105

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I  L  FR  G  +D++ + ++  +  +L++   +   + +   +   + G R    GQ
Sbjct: 106  CIRALMSFRLTGGTKDYIVVGSDSGRIVILEY-IPAKNALEKVHQETFGKTGCRRIVPGQ 164

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 165  YFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDN 224

Query: 175  PTIVVLYQDNKDA---------RHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D ++A         +H +     YE+ L     V   +S+  L+  A+ L+ 
Sbjct: 225  PMFACLEIDYEEADLDPSGDAAQHTQQTLTFYELDLGLNHVVRK-YSEP-LEEHANFLVS 282

Query: 222  VP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------- 267
            VP     P   GVLI  E  + Y   N      IR  I +    +D D  R         
Sbjct: 283  VPGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSAT 337

Query: 268  --------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                    +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S 
Sbjct: 338  HRTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASE 397

Query: 320  YGDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC 355
            +G+  L ++                           P A  + V +++   +  PIV   
Sbjct: 398  FGNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIVTSQ 456

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFD 414
            V DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD
Sbjct: 457  VADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEFD 516

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S
Sbjct: 517  AYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRS 574

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEI 532
              R   NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI
Sbjct: 575  DKRV--NEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEI 632

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI--------------------- 571
             C+ +  + +    S   +VG+  D +VRI SL   N +                     
Sbjct: 633  MCMALGTVPDGEQRSWFLSVGL-ADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMG 691

Query: 572  ----TKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT 627
                T   +G E +P      + +G  YL   L +G LL  +L+  +G+L D +   LG+
Sbjct: 692  HTESTTTAVGDEDVPAQRSGGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGS 751

Query: 628  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 687
            +P+ L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +  
Sbjct: 752  RPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVA 811

Query: 688  AKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICS-------------- 731
                 L I  ++ +  +  + + PL   PR  + H +  R     +              
Sbjct: 812  ISTNTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARK 871

Query: 732  ------LKNQSCAEESEM-----------------------------HFVRLLDDQTFEF 756
                  ++N +  EE E+                               +R LD    + 
Sbjct: 872  EQMAEEMRNAAGDEERELAREMANAFISEALPEDVFSAPKAGLGLWASQIRCLDAMHGQT 931

Query: 757  ISTYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---G 811
            +   PL   E     ++L  S + D   Y  VG A  L      ++G  +     D    
Sbjct: 932  MFNVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCS 991

Query: 812  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILA 870
             L+ +   E +    +L  F G+LLA   + +++Y     D G +++  +C   H     
Sbjct: 992  SLEFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQI 1046

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
            + +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + 
Sbjct: 1047 VNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADK 1105

Query: 931  FNLFTVRKNSEGATDE------------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            F   ++++     TD+            +RG L   G     E +  F  G ++M L  +
Sbjct: 1106 FGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLS--GASQKSENICSFHVGEIIMSLQKA 1163

Query: 979  DV--GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             +  G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS  
Sbjct: 1164 TLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-- 1221

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1222 ---SYYPVKNVLDGDLCEQYLSIDAVKQKSIAGDMFRTPNQICKKLEDI 1267


>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
 gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
          Length = 1228

 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 273/1250 (21%), Positives = 500/1250 (40%), Gaps = 196/1250 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  ++   I
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLMSTEI 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDN 117
            +G I  L  FR  G  +D++ + ++  +  +L++   S   + +   +   + G R    
Sbjct: 59   FGCIRALMAFRLTGGTKDYIVVGSDSGRIVILEY-IPSKNALEKVHQETFGKSGCRRIVP 117

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
            GQ   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G 
Sbjct: 118  GQYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGF 177

Query: 173  AKPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIP 221
              P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ 
Sbjct: 178  DNPMFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVS 237

Query: 222  VP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------- 267
            VP     P   GVLI  E  + Y   N      IR  I +    +D D  R         
Sbjct: 238  VPGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSAT 292

Query: 268  --------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                    +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S 
Sbjct: 293  HRTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASE 352

Query: 320  YGDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC 355
            +G+  L ++                           P A  + V +++   +  PI+   
Sbjct: 353  FGNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQ 411

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFD 414
            V DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD
Sbjct: 412  VADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFD 471

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S
Sbjct: 472  AYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRS 529

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEI 532
              R   NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI
Sbjct: 530  DKR--VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEI 587

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE- 591
             C+ +  + E    S   AVG+  D +VRI SL   N +T   +     P    LC  E 
Sbjct: 588  MCMALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEM 645

Query: 592  -------------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 626
                                     G  YL   L +G LL  +L+  +G+L D +   LG
Sbjct: 646  GHTESTTSAGGVNEDAPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLG 705

Query: 627  TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 686
            ++P+ L     + +  V A S R  + Y    +   + ++ + + +   F+S    + + 
Sbjct: 706  SRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIV 765

Query: 687  IAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICS------------- 731
                  L I  ++ +  +  + + PL   PR  + H +  R     +             
Sbjct: 766  AISTNTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKNAR 825

Query: 732  -------LKNQSCAEESEMHF-----------------------------VRLLDDQTFE 755
                   +++ +  EE E+                               +R LD    +
Sbjct: 826  KEQMAEEMRSAAGDEERELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQ 885

Query: 756  FISTYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED--- 810
             +   PL   E     ++L  S + D   Y  VG A  L      ++G  +     D   
Sbjct: 886  TMFNVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTC 945

Query: 811  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHIL 869
              L+ +   E      +L  F G+LLA   + +++Y     D G +++  +C   H    
Sbjct: 946  SSLEFMHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQ 1000

Query: 870  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
             + +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   +
Sbjct: 1001 IVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIAD 1059

Query: 930  NFNLFTVRKNSEGATDE------------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
             F   ++++     TD+            +RG L   G     E +  F  G ++M L  
Sbjct: 1060 KFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLS--GASQKSENICSFHVGEIIMSLQK 1117

Query: 978  SDV--GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
            + +  G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS 
Sbjct: 1118 ATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS- 1176

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                     KN LDGDL E +L +  ++   I+  M  +  ++CK++E++
Sbjct: 1177 ----SYYPVKNVLDGDLCEQYLSIDASKQKSIAGDMFRTPNQICKKLEDI 1222


>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
 gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
          Length = 1228

 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 269/1252 (21%), Positives = 497/1252 (39%), Gaps = 200/1252 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E+    P    +  ++   I+G
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             I  L  FR  G  +D++ I ++  +  +L++    + L             R    GQ 
Sbjct: 61   CIRALMAFRLTGGTKDYIVIGSDSGRIVILEYIPSKNSLEKVHQETFGKSGCRRIVPGQY 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   P
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A    + + A + +    F E     N+        L+  A+ L+ VP 
Sbjct: 181  MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 241  GNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +G+
Sbjct: 296  KSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                           P A  + V +++   +  PI+   V D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD ++
Sbjct: 415  LANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C+
Sbjct: 533  --VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---- 591
             +  + E    S   AVG+  D +VRI SL   N ++   +     P    LC  E    
Sbjct: 591  ALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLSPCSMQALPSPAES-LCLVEMGHT 648

Query: 592  ----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                                  G  YL   L +G LL  +L+  +G+L D +   LG++P
Sbjct: 649  ESTTNASGADEDVPAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRP 708

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            + L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +    
Sbjct: 709  VKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIS 768

Query: 690  EGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES------- 741
               L I  ++ +  +  + + PL   PR       +    I    + +  EE+       
Sbjct: 769  TNTLRILALEKLGAVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNERKEQ 828

Query: 742  ---EMHF----------------------------------------VRLLDDQTFEFIS 758
               EM                                          +R LD    + + 
Sbjct: 829  MAEEMRSAAGDEERDLAREMANAFINEVLPEDMFSAPKAGLGLWASQIRCLDAMHGQTMF 888

Query: 759  TYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKL 813
            + PL   E     ++L  S + D   Y  VG A  L      ++G  + V+ ++     L
Sbjct: 889  SVPLAQNEAIMAMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDVYKIDPTCSAL 948

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALY 872
            + +   E +    +L  F G+LLA   + +++Y     D G +++  +C   H     + 
Sbjct: 949  EFLHRTEIEEIPGALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVN 1003

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F 
Sbjct: 1004 IQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFG 1062

Query: 933  LFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVM 973
              ++++     TD+            +RG L       E +  +H+GE +   +  +L+ 
Sbjct: 1063 NLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI- 1121

Query: 974  RLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
                   G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +R
Sbjct: 1122 ------PGGSEALIYSTLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYR 1175

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            S          KN LDGDL E +L +  ++   I+  M  +  ++CK++E++
Sbjct: 1176 S-----SYYPVKNVLDGDLCEQYLSVDASKQKSIAGDMFRTPNQICKKLEDI 1222


>gi|171685748|ref|XP_001907815.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942835|emb|CAP68488.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1235

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 294/1247 (23%), Positives = 523/1247 (41%), Gaps = 195/1247 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
            Y +T   PT ++ + +G F+  +E  +I A  +R+ +    P QG +  +L   ++G I 
Sbjct: 10   YSLTIQPPTTISQALLGQFSGTKEQQIITASGSRLTLLQPDPRQGKVNTILSQDVFGIIR 69

Query: 64   TLELFRPHGEAQ---DFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             +  FR  G  +   D++ +AT+  +  ++++  +++      +        R    GQ 
Sbjct: 70   AIASFRLAGSHKGNLDYIILATDSGRIAIIEYLPKTNRFNRIHLETFGKSGVRRVVPGQY 129

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
               DP  R  LI     + L  V+  + + +L  +  +   +  VL +  +    G A P
Sbjct: 130  LAADPKGRACLIASLEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALDVGYANP 189

Query: 176  TIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
                L  D  +A    T             YE+ L     V   WS + +D  + LL  V
Sbjct: 190  VFAALELDYTEADQDPTGQAGQEPEAQLVYYELDLGLNHVVRK-WS-DAVDPTSSLLFQV 247

Query: 223  P-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSRYLLGD 272
            P     P   GVL+ GEE + Y  +N  AF+  IP R  P+      R    G  + L  
Sbjct: 248  PGGSDGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRRGPTEDPQRKRTIVSGVMHKLKG 305

Query: 273  HAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVV 314
             AG    L+ T + +                  +V  LKI+      IA+++  L +  +
Sbjct: 306  SAGAFFFLLQTEDGDLFKVTLDMVEDDNGNPTGEVKRLKIKYFDTIPIATSLCILKSGFL 365

Query: 315  YIGSSYGDSQLIKLN---------------LQPDAKGSY------------VEVLERYVN 347
            ++ S +G+  L +                    D++ +Y            + ++E   +
Sbjct: 366  FVASEFGNHSLYQFEKLGDDDEELEFSSEEFPTDSRAAYNPVYFQPRPLENLTLVESIDS 425

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG-MWSLR 406
            + P +D  V +L  +   Q+ +  G     S R++++G+ ++E  + EL G    +W+ +
Sbjct: 426  MNPQIDCKVANLTGEDAPQIYSVCGNGARSSFRMLKHGLEVSEIVASELPGTPAAVWTTK 485

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             +  D +D ++V+SF + T +L++   + +EE    GF +   TL         L+QV  
Sbjct: 486  LTKYDEYDAYIVLSFTNATLVLSIG--ETVEEVSDSGFLTTVPTLAVQQLGEEGLIQVHP 543

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-K 524
              +R +        NEW +P   S+  A  N +QV++A   G +VY E+  DG L E  +
Sbjct: 544  KGIRHIVQGRV---NEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDE 600

Query: 525  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 583
              ++   ++ L +  + E    S   AVG   D +VRI SL P+  L  K        P 
Sbjct: 601  KKEMSGTVTSLSLGRVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQALTAAPA 659

Query: 584  SVLLCAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            S+ + + E    G + YL   L  G  L  +L+  TGELTD ++  LG +P  L   S +
Sbjct: 660  SLSIMSMEDSFGGTTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQ 719

Query: 639  NTTHVFAASDRPTVIYS-----------------------SNKKLLYSNVNLKEVSHMCP 675
                V A + RP + Y+                       S+++ L   V +        
Sbjct: 720  GRPCVLALNSRPWLGYTDPITKGFVMTPLSYVDLEYGWNFSSEQCLEGMVGIHANFLRYV 779

Query: 676  FNSAAFP-------DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC-HQEQSRTF 727
            FN    P       DS AIA   +  +G  + IQK    SIPL   P+R+  H EQ   +
Sbjct: 780  FNLFLLPLLYDDKRDSYAIAMRVDYDLGD-NMIQK----SIPLTYTPKRLVKHPEQPYFY 834

Query: 728  AICS--------LKNQSCAEESEMHFVRLLDDQTFEF----------------ISTYP-- 761
             I +        L+ Q  A+ +      +L  + F +                +S  P  
Sbjct: 835  TIEADNNTLPPELRAQLLAQSNTNGDAAILPPEEFGYPKARNRWASCISIVDPVSDEPSV 894

Query: 762  -----LDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK- 812
                 LD  E   S    SF S D   +  VGT   ++    + ++G I V+   +DG+ 
Sbjct: 895  LNRVDLDNNEAAISAAVVSFASQDGESFLIVGTGKDMILSPRQFSEGYIHVYRFHDDGRD 954

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            L+ I + + +    +L  F G+LLA I + +++Y   L+    R+ Q+E       L + 
Sbjct: 955  LEFIHKTKIEEPPMALIPFQGRLLAGIGKTLRIYDLGLK-QLLRKAQAEIAPQ---LIVS 1010

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            +QT+G+ IVVGD+ + I+  +YK E   +   A D    W +   ++D +   G +   N
Sbjct: 1011 LQTQGNRIVVGDVQQGITYAVYKPESNKLLAWADDTINRWTTCTAMVDYESVAGGDKFGN 1070

Query: 933  LFTVRKNSEGA--TDEERGRLEVVGEYHLGEFVNRFRHGSLVMR------LPDS------ 978
            ++ +R     +  +DE    +++V   H   +++   + + +M       LP S      
Sbjct: 1071 VWILRAPERASQESDEPGSEIQLV---HAKSYLHGAPNRTALMAHFYTQDLPTSITKTNL 1127

Query: 979  DVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 1037
             VG    +++  + G +GV I  +  E   F + L++++R     + G +H  +R +   
Sbjct: 1128 VVGGQDVLLWSGIQGTVGVLIPFVSREDVDFFQSLESHMRAEDPPLAGRDHLIYRGY--- 1184

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
               V  K  +DGDL E F  L+  +   I+  ++ SV E+ +++ ++
Sbjct: 1185 --YVPVKGVIDGDLCERFALLANDKKQMIAGELDRSVREIERKISDI 1229


>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
          Length = 1206

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 288/1221 (23%), Positives = 516/1221 (42%), Gaps = 166/1221 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTNV  + +G F   +E  +I    +  ++ LL P   Q     +L   I+G 
Sbjct: 4    YSLTIQPPTNVVQAVLGQFAGTKEQLIITGSGS--QLTLLRPDPAQGKVIALLSHDIFGI 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            + ++ +FR  G  +D++ +AT+  +  +L++    +      M        R    G+  
Sbjct: 62   LRSIAVFRLAGSNKDYIILATDSGRITILEYLPGPNRFNRLHMETFGKSGIRRVVPGEYL 121

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
              DP  R  LI     + L  V+  +++ +L  +  +   +  VL I  +    G A P 
Sbjct: 122  ACDPKGRACLISAVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVIAMVALDVGYANPV 181

Query: 177  IVVLY-------QD--NKDARHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L        QD   +    V+T    YE+ L     V   WS + +D  A LL  VP
Sbjct: 182  FAALEIEYTEVDQDITGEALSEVETQLVYYELDLGLNHVVRK-WS-DPVDPTASLLFQVP 239

Query: 224  -----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDH 273
                 P   GVL+ GEE I Y  +N  A +  IP R   T+  +  R    G  + L   
Sbjct: 240  GGNDGP--SGVLVCGEENITYRHSNQDALRVPIPRRRGATEDPSRKRNIVAGVMHKLKGS 297

Query: 274  AGLLHLL--------------VITHEKEKVTG----LKIELLGETSIASTISYLDNAVVY 315
            AG    L              ++  E+   TG    +KI+      +A+++  L +  +Y
Sbjct: 298  AGAFFFLLQSDDGDLFKITIDMVEDEEGAPTGEVQRMKIKYFDTVPVATSLCILKSGFLY 357

Query: 316  IGSSYGDS---QLIKL------------NLQPDAKGSY------------VEVLERYVNL 348
            + S +G+    Q  KL            +   D   +Y            + +++    +
Sbjct: 358  VASQFGNYAFYQFEKLGDDDDEVEFSSEDFPVDPLAAYEPVYFYPRLAENLALVDSIPAM 417

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P++D  V +L  +   Q+ T  G     + R +++G+ +NE  + EL G+   +W+L+ 
Sbjct: 418  NPLLDCKVANLTGEDAPQIFTICGNGARSTFRTLKHGLEVNEIVASELPGVPSAVWTLKL 477

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            ++D+ +D ++V+SF + T +L++   + +EE    GF +   T+       + L+QV   
Sbjct: 478  NSDEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHPR 535

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA 526
             +R + + +    NEW +P   S+  A+ N+ QV +A   G +VY E+  DG L E    
Sbjct: 536  GIRHIRNGNV---NEWSAPQHRSIVAASTNSHQVAIALSSGEIVYFEMDSDGSLAEYDEK 592

Query: 527  QLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            +  +  ++ L +  + E    S   AVG   D +VRI SL P+  L  K        P S
Sbjct: 593  KEMFGTVTALSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPESTLENKSVQALTAAPTS 651

Query: 585  VLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            + +   +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+ L   +  
Sbjct: 652  LAIIPMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQVTVG 711

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM-----CPFNSAAFPDSLAIAKEGEL 693
              T V   S RP + Y++    + S+  +  +S++       F+S    D +   +   L
Sbjct: 712  GRTCVLGLSSRPWLGYANP---ITSSFEITPLSYVDLEWGWNFSSEQCEDGVVGIQGQSL 768

Query: 694  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV------ 746
             I +ID + + L   SIPL   P++         F      N +   + +   +      
Sbjct: 769  RIFSIDRLGETLLQSSIPLTYTPKKFVKHPDEPLFYTIEADNHTLPPDLQAKLLADPAAV 828

Query: 747  ----RLLDDQTF----------------EFISTYP-------LDTFEYGCSILSCSF-SD 778
                ++L  + F                + +S  P        +  E   S+   SF S 
Sbjct: 829  NGDAKVLPPEDFGHPRGNRRWASCISVVDPVSEEPSVLQRVDFENNEAAVSVAVVSFASQ 888

Query: 779  DSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKL 835
            D+  +  VGT   ++      ++  I ++  + G  +L+ I + + +    +L  F GKL
Sbjct: 889  DNESFLVVGTGKDIVLNPRSSSEAYIYIYRFQQGGRELEFIHKTKIEEPATALLPFQGKL 948

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 895
            LA I + +++Y   +R    R+ Q+E      I++L   T+G  IVV D+ + ++L++YK
Sbjct: 949  LAGIGKTLRMYDLGMR-QLLRKAQAEVVPQ-QIVSL--NTQGSRIVVSDVQQGVTLVVYK 1004

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA--TDEERGRLEV 953
                 +     D  A W +   ++D +   G +   N+F VR  ++ +   DE+   L +
Sbjct: 1005 SASNKLIPFVDDSIARWSTCTTMVDYESVAGGDKFGNMFIVRSPAKASEEADEDAAGLHL 1064

Query: 954  V-------GEYHLGEFVNRFRHGSLVMRLPDSD--VGQIPTVIFGTVNGVIGV-IASLPH 1003
            V       G  H  E +  F    ++  +  +   VG    +++  + G IGV I  +  
Sbjct: 1065 VNARDYLHGTQHRLELMCHFFTQDILTSINKTGLVVGGQDVLLWSGIMGTIGVFIPFVSR 1124

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            E   F + L+ +LR     + G +H  +RS+    K V     +DGDL E F  L   + 
Sbjct: 1125 EDTDFFQSLEQHLRTEDGPLAGRDHLMYRSYYAPVKGV-----IDGDLCERFSILPNDKK 1179

Query: 1064 DEISKTMNVSVEELCKRVEEL 1084
              I+  ++ SV E+ +++ ++
Sbjct: 1180 QMIAGELDRSVREIERKISDI 1200


>gi|353236335|emb|CCA68332.1| probable splicing factor 3B subunit 3 [Piriformospora indica DSM
            11827]
          Length = 1243

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 273/1242 (21%), Positives = 511/1242 (41%), Gaps = 200/1242 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T    +++T + VGNF+  ++  +++++ TR+++    P    L  +L   ++G I 
Sbjct: 32   YNLTLEHASSITAAVVGNFSGVRQQEILVSRGTRLQLLRPDPALGKLSTVLVYDVFGSIR 91

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQI 120
            +L  FR  G  +D+  + ++  +  +L++D + +   +L     G    R   P   GQ+
Sbjct: 92   SLAAFRLTGGTKDYAIVGSDSGRIVILEYDPKQNAFNKLYQETYGKTGARRIVP---GQM 148

Query: 121  GIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
               DP  R + +   +   L  V+  D    L  +  +   +   +    +    G   P
Sbjct: 149  LATDPKGRSLMVSAMEKAKLVYVLNRDAAANLTISSPLEAHKPSAIIHHIVGVDVGFENP 208

Query: 176  TIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
                L  D  +A             + +  YE+ L     V   WS+   D  A+LL+ V
Sbjct: 209  LYAALEVDYSEADNDPSGQAIRDTEKMLTFYELDLGLNHVVRK-WSEPT-DRRANLLVQV 266

Query: 223  P--------PPLC------GVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR- 267
            P        PP+       GVL+  E+ ++Y   +  +   +R  I +    ++   SR 
Sbjct: 267  PGGQTTTGDPPITRIDGPSGVLVCCEDHVIYRHMDQPQ---LRVPIPRREHPLEDASSRG 323

Query: 268  ----------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDN 311
                            +LL    G L+ + + H+ E V  LKI+     S A  +  L +
Sbjct: 324  LLIISAVMHRMKGAFFFLLQSELGDLYKVTLEHQDEDVVALKIKYFDTVSPAVNLCILKS 383

Query: 312  AVVYIGSSYGDS---QLIKLN---------------------LQPDAKGSY-------VE 340
              +++ + +G+    Q  KL                       QP  +  +       + 
Sbjct: 384  GHLFVPAEFGNHAFYQFQKLGDDDKEPEYSSADYPGNGMRTPSQPLPRAYFRPKPLENLV 443

Query: 341  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 399
            +L+   +L PI+   V +L         T  G     + R +++G+ + E  + +L  I 
Sbjct: 444  LLDELESLDPILAARVQNLP--DTSLFYTACGKGAKSTFRTLKHGLEVEENGNSDLPSIP 501

Query: 400  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 459
              +W+L+ +  D +D+++V+SFI+ T +L+    +E+EE    GF S   TL       +
Sbjct: 502  NAVWTLKLAETDQYDSYIVLSFINGTLVLSFG--EEIEEIPNSGFLSSEPTLAAQQLGSD 559

Query: 460  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DG 518
             L+QV    +R V S  R   NEW++P G ++  AT N  QV++A     LVY E+  +G
Sbjct: 560  ALLQVHPRGIRHVLSDKRV--NEWRAPIGMAIVAATTNKRQVVVALSSAELVYFELDYEG 617

Query: 519  ILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKE 574
             L E +  + +   +  L +  + E     +  AVG   D +VRI SL PD  L +I+ +
Sbjct: 618  QLNEFQERKAMGSTVLALSVGEVPEGLQRFKYLAVGC-EDQTVRIISLDPDSTLEMISLQ 676

Query: 575  HLGGEIIPRSVLLCAF--------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 626
             +     P S+ +              +++   L +G LL  +L+   G+L D +   LG
Sbjct: 677  AVTAP--PSSISIADMFDSSIDKHRPTTFVNIGLQNGVLLRTVLDPTNGKLADTRTRFLG 734

Query: 627  TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 686
             +P+ L       +  V A S R  + Y+    + ++ +    +   C  N+   PD   
Sbjct: 735  NRPVRLVRTQVHGSPGVLALSSRSWLNYTYQGLVHFTPLAYDRLDGACSVNAELCPDGFI 794

Query: 687  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE------ 739
                  L I  +  +  KL    +PL   PR+     Q+  F +    +++ +E      
Sbjct: 795  GIANNTLRIFQVPKLGSKLKQEILPLSYTPRKFVSHPQNSYFYLIESDHRAMSETMIEER 854

Query: 740  -----------ESEM---------HF----------VRLLDDQTFEFISTYPLDTFEYGC 769
                       + EM         HF          +R++D      ++ + LD  E   
Sbjct: 855  VKAIEMSGEKVDREMLELDPRIYGHFKAPEGVWASCIRIIDPVNLRSVAAFSLDNNEAAF 914

Query: 770  SILSCSF-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 825
            SI    F + +  +   VGTA   ++ P        R+  F      L+L+ + +     
Sbjct: 915  SIAVVPFAARNGELLLVVGTAVDTHLAPRSCSTGYLRVYSFTEGGSGLELLHKTDIDEVP 974

Query: 826  YSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 881
             +L AF G+L+A + + ++LY    K +LR    R+  +          + + T+G  I+
Sbjct: 975  TALMAFQGRLIAGVGKALRLYDIGKKKLLRKAENRQFATAI--------VTLSTQGSRIL 1026

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN-- 939
             GD+ +SI  + YK  E  +   A D +A W++A  +LD +  + A+   N+F  R +  
Sbjct: 1027 AGDINQSIYYVAYKAAENRLLIFADDTSARWITASTMLDYNTVVAADKFGNVFVNRLDEA 1086

Query: 940  -SEGATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
             S+   D+  G               + +++  +H+G+ +   +  +LV        G  
Sbjct: 1087 VSKQVDDDPTGAGILHEKSVLMGAPHKTKMLTHFHVGDVITSIQRVALV-------AGAR 1139

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
              V++  ++G IG++  L   +   F+  L+ ++R     + G +H  WR +    K   
Sbjct: 1140 EVVVYFGLHGTIGILVPLVTKDDVDFISTLEQHMRTENLSLVGRDHLSWRGYYTPVKAT- 1198

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                +DGDL E F  L   +   I+  ++ +V ++ K++E L
Sbjct: 1199 ----VDGDLCEYFAKLPTQKQLAIAGELDRTVGDVLKKLESL 1236


>gi|323447810|gb|EGB03719.1| hypothetical protein AURANDRAFT_72671 [Aureococcus anophagefferens]
          Length = 760

 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 204/761 (26%), Positives = 349/761 (45%), Gaps = 79/761 (10%)

Query: 354  FCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP 412
             CVV+  + +GQG++V C GA   G+L IV +G+ +   AS     I  +  + SS  + 
Sbjct: 1    MCVVEPADAEGQGRIVACCGAGDAGTLHIVHDGLDVTGTASRSPTRITNLSLILSSRGE- 59

Query: 413  FDTFLVVSFISETR--ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV- 469
                ++VS  + T   ++A +       +  +GF     T++C + + +  VQVT  ++ 
Sbjct: 60   ---MVIVSTEAATHAFLVANDGSTTAFPSNPQGFDETISTIYCCN-LGDAAVQVTPRAIS 115

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLE 529
            +  +  +R     W+   G        N + +L++   G LV L   D  +  +  A L+
Sbjct: 116  KFYTGENRRKLKTWRPKDGRITAATGNNGAVILISLSNGKLVLL---DCDVEPIASAALD 172

Query: 530  YEISCLDINPIG----ENPSYSQIAAVGMWTDISVRIFSLPD--LNLITKEHLGGE---- 579
             E SC+ ++P G    ++   +   AV +W+D  V   S+ D  LN I    +  +    
Sbjct: 173  DEASCVALSPSGSASFKDLGMAHATAVSVWSD-PVSCVSVYDSILNKIHDPTITWQDKSS 231

Query: 580  -----IIPRSVLLCAFEGISYLLCALGDG--HLLNFLLNMKTGELTDRKKVSLGTQPITL 632
                    R+++L       YL CA GDG   +  F         T  + VSLG  P  +
Sbjct: 232  NEQTLQFVRALVLSEINEKPYLFCASGDGLVTVYQFACGNDVVTTTRLRAVSLGVLPARV 291

Query: 633  RTFSS--KNTTHVFAASDRPTVI----YSSNKKLLYSNVNLKEVSH-----MCPFNSAAF 681
                +  +    V   SDR  V+     S  + ++ S     E +      + P +  A 
Sbjct: 292  LILGAFDRMARSVLCFSDRACVVRRGCASHLQWVVASAKAFGETTEWRYYIVVPLHKKAT 351

Query: 682  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES 741
               LA   +    I  ID  Q + + S+PL E P  ICH  QS  FA+C++ ++    + 
Sbjct: 352  TAILACGSQ--FAICKIDANQGIKVVSVPLAEQPLCICHDLQSHLFAVCTIDHREGDNQG 409

Query: 742  EMHFVRLLDDQTFEFISTYPLDTFE--YGCSILS---CSFSDDSNVYYCVGTAYVLPEEN 796
             + F+R  D+  +  +    L+  E    CSI+S    S   D   ++ VGTA+   E +
Sbjct: 410  VIRFLR--DEAPYNDVHREALEPLEIPLCCSIISLDSISTYKDQRAHFVVGTAFAAQEND 467

Query: 797  -EPTKGRILVFIVEDGKL--QLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLYKWMLRD 852
             EP  GR+++F      +   ++   E  GAVY + A    LL  A+N  I +Y  ++RD
Sbjct: 468  FEPCSGRMIIFRSGQANVAPSVLFFVEANGAVYDVAAMRASLLVCAVNHAIHIYDPVVRD 527

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
            +    L+    + G ++AL VQ  G+ IVVGD+M+S++LL    ++  I E A DYN NW
Sbjct: 528  NRRGHLKPRASYDGLVVALKVQCYGNLIVVGDMMRSVTLLNLIRQKMIIVEVACDYNTNW 587

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
            + A+E++ D  ++ A+ + +L  + ++  G +D+    LE   + HLG+ V  F  GS++
Sbjct: 588  VCALEVIGDGSFIIADASGSLVAL-ESLYGNSDKGY-FLESRAKMHLGDVVTCFARGSIM 645

Query: 973  MR--LPDSDVGQIPT-VIFGT-----------------VNGVIGVIASLPHEQYLFLEKL 1012
             +    +  V ++ T +IFG                  V+G IG I S+    +  LE+L
Sbjct: 646  TQDDWRNPKVSKVATPLIFGCVTSSRVLVLTPLIARYQVSGAIGCIVSIDDVTHSLLERL 705

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGD 1050
               L +   GVG  +HE +++ +N   T +A    +F+D +
Sbjct: 706  SKVLLEFHSGVGDFDHETFQALHNNVATCNAAPMDDFIDAN 746


>gi|164656549|ref|XP_001729402.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
 gi|159103293|gb|EDP42188.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
          Length = 1207

 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 281/1226 (22%), Positives = 506/1226 (41%), Gaps = 182/1226 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEI-HLLTPQG-LQPMLDVPIYGRIA 63
            Y +T    +NVT + VG F   +E  +++ + +R+E+ H+ T  G +   L    +  I 
Sbjct: 4    YNLTLQPSSNVTTAVVGQFAGTREQQVLLVRGSRLEMYHIDTNSGQMTRSLAQHTFSNIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +   FR  G ++D+L + ++  +  VL+++   ++   +   +   R G R    GQ   
Sbjct: 64   SAASFRLMGGSKDYLILGSDAGRIVVLEYNGSLNQF-EKVHEETFGRSGNRRIVPGQYLA 122

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNI---RLEELQVLDIKFLYGCAKPTI 177
             DP  R  LIG      L  ++  D    L  +  +   R   +    +    G   P  
Sbjct: 123  TDPKGRAVLIGAVEKSKLIYILNRDTDAHLTISSPLEAHRHSAIVQCIVGVDVGYENPLF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVPPP 225
              L  D  DA    T E   + +            + V   W++  + + A  LIPVP  
Sbjct: 183  ASLETDYADADADPTGEAYARTEQMLTYYELDLGLNHVVRRWTEP-VASSAHHLIPVPGG 241

Query: 226  L----------CGVLIIGEETIVYCSANAFK---AIPIRPSITKAYGRVDADGSR----- 267
                        GVL+  ++ IVY      +    IP+R    + +G   + GS      
Sbjct: 242  YNHATERWDGPSGVLVCMDDYIVYKHPGQPEHRVPIPVR----EQHGFGQSRGSMIVASV 297

Query: 268  ---------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGS 318
                      L+ +  G L  + + HE E+V  L+I       +A+T+  L +  + + S
Sbjct: 298  LHKMKTSFFLLVQNEDGDLFKVSVDHEDEQVEALRIRYFDTVPVAATLCILRSGFLLVAS 357

Query: 319  SYGDSQLIKLNL------------------QPDAKGSYVEVLERYV-------------- 346
              G  QL                         DA  S +  L  +               
Sbjct: 358  ETGAQQLYAFQKLGDDDDERFPEYISTDYGSSDAGPSPLPSLPTFCPRPLDNLALAYELD 417

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
             L P++D  V +       Q+    G     S + +R+G+ ++E  S +L G+ + +WS 
Sbjct: 418  ALDPLLDAKVSNPLHSDVPQIYAACGRGARSSFKRLRHGLEVSEVVSSDLPGVPEAVWST 477

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            +  + D +D ++V+SF++ T +L++   + +EE E  GF +  +TL       + L+QV 
Sbjct: 478  KLRSSDQYDGYIVLSFVNGTLVLSIG--ETIEEVEDSGFLTTERTLAVQQLGTDALLQVH 535

Query: 466  SGSVRLVSSTSRELRNEWKSPP-----GYSVNVATANASQVLLATGGGHLVYLEIG-DGI 519
               +R + S  +   NEW +P         +  AT N  QV+LA     +VY E+  DG 
Sbjct: 536  PRGIRHILSNKQV--NEWTTPSCQDGSPTQIVAATTNERQVVLALDSQEIVYFELDMDGQ 593

Query: 520  LTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLG 577
            L E +  + +E +I  L I+   E    +   A+    D +VRI SL PD  L       
Sbjct: 594  LNEFQERRDIEADIVALSISACPEGSQRTPYVAIAC-ADQTVRIVSLDPDSTLAPMSLQA 652

Query: 578  GEIIPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                P S+ +C     S        ++   L +G  +  +L+  TG+LTD +   LG +P
Sbjct: 653  LTAPPSSISVCEMLDASLDRHHLTMFVCIGLANGVYIRTVLDPSTGQLTDTRTRFLGGRP 712

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            + L        T + A S R  + Y+ +  L ++ + L+ ++H+  F++   PD L   +
Sbjct: 713  VRLVRTQVHGDTAMMALSTRSWLAYTLHSHLHFTPLMLEALTHVSTFHTELCPDGLLGIE 772

Query: 690  EGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAI----------CSLKNQSC 737
               L I T+  +  +L + S+ L   PR++  H +Q+  F +            + +Q+ 
Sbjct: 773  GNALRILTVPRLGSELKMDSLRLTYTPRKLAVHPQQASLFYVIESDHRVVPPTDVVSQAR 832

Query: 738  AEESEMHF-------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-VY 783
                 + F             +R++D  T +  + Y L+  E   S+    F+   N ++
Sbjct: 833  TAWDPVQFGHVRASAGHWASCLRVVDGTTMQTCAEYALEKDEAALSMALVPFAACGNELF 892

Query: 784  YCVGTAYVLPEENEPTKGRILVF----IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAA 838
              VG+A  L   + P   R        + ++G  L L+ + E      +L AF+G+LLA 
Sbjct: 893  LVVGSA--LGVTHAPLTWRAAFLSTYRLTDNGCGLALVHKTEVDHVPLALRAFHGRLLAG 950

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYK 895
                ++++     D GT++L  +C        +++L VQ  G  ++VGD+ +S+   +YK
Sbjct: 951  TGPYVRIF-----DMGTKKLLRKCQSRPFPSKVVSLQVQ--GYRVIVGDMQESVHYSVYK 1003

Query: 896  HEEGAIEERARDYNANW-MSAVEILDDDIYLGAENNFNLFTVRKNSEG--ATDE------ 946
                 +   A D    W  SA+ +LD D  +  +   N+F +R +S    + DE      
Sbjct: 1004 PATNTLVAFADDIMPRWTTSALLMLDYDTVMAGDKFGNVFVLRIDSSASLSADEDPTGLM 1063

Query: 947  ---ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
               ER        R +++  YH+G+ +      SLV        G  P V++  VNG IG
Sbjct: 1064 LQNERSYLMGAAHRAQLLAHYHVGDIITSLSMESLV-------PGGRPVVLYTCVNGTIG 1116

Query: 997  VIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
             +   +  E       L+ ++R+    + G +H  +R      K V     +D DL E +
Sbjct: 1117 ALVPFISREDVRLFTTLEMHMRQENLSLTGRDHLAYRGHYTPVKAV-----VDADLCELY 1171

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRV 1081
              L   + + I+  ++ +  ++ K++
Sbjct: 1172 TALPHEKQESIADELDRTPADIAKKL 1197


>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
 gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
          Length = 1197

 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 264/1223 (21%), Positives = 520/1223 (42%), Gaps = 173/1223 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTS-PQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            ++ Y +T    + +  +  G+F   P++  + IA+   +++    P+   +  +     +
Sbjct: 1    MYLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHILCSHNAF 60

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ + ++  +  +L+++ +      R   +   + G R    G
Sbjct: 61   GIIRSLLAFRLTGGTKDYIVVGSDAGRIVILEYNTQKV-CFERVHQETFGKTGCRRIVPG 119

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  LIG      L  ++  D    L  +  +   +   +    +    G  
Sbjct: 120  QFLAIDPKGRAILIGAVERQKLVYIMNRDASANLTISSPLEAHKSHCICYSVVGVDVGFE 179

Query: 174  KPTIVVLYQDNKDARHVKTYEVALK------------DKDFVEGPWSQNNLDNGADLLIP 221
             PT   L  D ++  H  T  +A K              + V   +++  +D G ++LI 
Sbjct: 180  NPTFACLEVDYEEVDHDSTGHLATKIPQTLTFYELDLGLNHVVRKYAEPLVDKG-NILIS 238

Query: 222  VP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------- 267
            VP     P   GV++  E  +VY   N      I+  + +    +D D  R         
Sbjct: 239  VPGGQDGPS--GVIVCCENYLVY--KNLGDQPDIKCPVPRRRNELD-DCDRTVIIVCAAT 293

Query: 268  --------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                    +L+    G +  + +  E + VT LKI+      +++ +  L    ++  S 
Sbjct: 294  HKTKLMYFFLVQTDQGDIFKVTLESEHDIVTELKIKYFDTIPVSNAMCILKTGFLFTASE 353

Query: 320  YGDSQLIKL--------------NLQPDAKGSY---------VEVLERYVNLGPIVDFCV 356
            +G+  L ++               +Q +   ++         + V+++  +L P++   +
Sbjct: 354  FGNHHLYQIAHLGDEDDEPEFSSRMQLEEGETFFFAPRGLTNLAVVDQMDSLSPLISSYI 413

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDT 415
             DL  +   Q+ T  G     +++++RNG+ + E A  EL G    +W+++ + DD FD+
Sbjct: 414  DDLANEDSPQIYTLIGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKFDS 473

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
             +VVSF++ T +L++   + +EE    GF   T TL C     + L+QV    +R + + 
Sbjct: 474  HIVVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIRAD 531

Query: 476  SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEIS 533
             R   NEWK+P   ++     N  QV +A  GG LVY E+   G L E  +  +L  ++ 
Sbjct: 532  RRV--NEWKAPGKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVL 589

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAF 590
            C+ ++ I E    S+   VG+  D +VRI SL     L+ ++ + L  E  P S+++   
Sbjct: 590  CMSLSEIPEGELRSRFLTVGL-ADKTVRIISLDPQDCLSPLSMQALPSE--PESIIVLEM 646

Query: 591  EGIS-------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
             G         +L   L +G LL   ++  TGELTD +   LGT+ + L     ++   +
Sbjct: 647  FGTETQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFHVRIQSKDAI 706

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 703
             AAS R  ++Y    +   + ++   +     F+S   P+ +    E  L I +++ +  
Sbjct: 707  MAASSRAWLLYDYQSRFHLTPLSYAALEFAAGFSSEQCPEGIVAIAENTLRILSLEKLGA 766

Query: 704  LHIRSI-PLGEHPRR-ICHQ---------------------EQSRTFAICSLKNQSCAEE 740
            +    + PL   PRR + H+                     E+ +  A   ++    AEE
Sbjct: 767  VFNHVVHPLDYTPRRMVVHKASGNLIIIENDHAAFTVKGKMERRKQLADELMEVAKEAEE 826

Query: 741  SEMHFVRLLDDQTFEFIST--------------YPLDTFEYGCSILSCSFSDDSNVYYC- 785
            ++   V+ + D   ++ ST              +P    E   +I    F + S+  +  
Sbjct: 827  ADQQAVKEMADAIRKWASTVRVMRSNDGETLSHFPFAEDEAAFAIAMVQFQNQSDTQFVL 886

Query: 786  VGTAYVLP-EENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
            VG    L  +  +   G I  F++      LQL+    T   V +++ F G  LA + +K
Sbjct: 887  VGCGCELQLKPRKANGGCIYTFLLAANGTTLQLLHRTATDEVVNAIHDFRGMALAGVGKK 946

Query: 843  IQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
            ++LY     D G R+L ++C +       + +++ G  IVV D  +S+  + YK ++G +
Sbjct: 947  VRLY-----DLGKRKLLAKCENRQIPTQVVDIRSMGQRIVVSDSQESVHFMRYKKQDGQL 1001

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE------------ERG 949
                 + +  +++ V +LD D  +   + F    V +  +G T+E            +RG
Sbjct: 1002 SIFCDETSPRYVTCVCLLDYDT-VAVGDRFGNIAVLRLPKGVTEEVQEDPTGVRALWDRG 1060

Query: 950  -------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-L 1001
                   +LE +   ++G+ +   +  SLV        G    + + T++G+IG++   +
Sbjct: 1061 NLNGASQKLEAIAHLYIGDAITSMQKTSLV-------PGANDCLCYTTISGIIGILVPFM 1113

Query: 1002 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
              +++ F + L+ ++R     + G +H  +RS+         K+ +DGDL E +  +   
Sbjct: 1114 SRDEFEFFQNLEMHMRVEYPPLCGRDHLAYRSY-----YFPVKSIIDGDLCEQYSLMPLD 1168

Query: 1062 RMDEISKTMNVSVEELCKRVEEL 1084
            +   + + +     E+ K++E++
Sbjct: 1169 KQKSVGEELGRKSTEIHKKLEDI 1191


>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
 gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
          Length = 1235

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 288/1222 (23%), Positives = 509/1222 (41%), Gaps = 169/1222 (13%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++ A  +++ IH   P QG +Q +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAILGQFSGTKEQQIVSAAGSKLTIHRTEPSQGKVQTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ I ++  +  ++++   +     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSNKDYIIIGSDSGRITIVEY-VPAQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
            Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYE 184

Query: 169  --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
              ++   +     + QD+    + +T      YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEVDQDSTGQAYEETEKMLVYYELDLGLNHVVRK-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       GVL+  E+ IVY  +N  AF+  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENPERKRCITAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLHLL---VITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L  L   ++  E E+ TG    LK++      +AS++  L +  +++ 
Sbjct: 303  AFFFLLQSEDGDLFKLTMEMVEDENEQATGEVKRLKLKYFDTVPLASSLCILKSGFLFVA 362

Query: 318  SSYGDSQLIKLN-----------LQPDAKGSYVEVL----------------ERYVNLGP 350
            S  G+    +             +  D      E L                E   +L P
Sbjct: 363  SETGNQHFYQFEKLGDDDDEIEFISDDYSADLTEPLPPVYFRPRPAENLNLVESIASLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++   + +L  +   Q+ T  G     S R +++G+ ++E    EL  +   +W+ + + 
Sbjct: 423  LMSCSIANLTEEDAPQLYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLTR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D +D ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  NDQYDAYIVLSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541  RHIHADQR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQ 598

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV- 585
            +   ++CL +  + E    S   AVG   D +VRI SL P+  L  K        P ++ 
Sbjct: 599  MSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPESTLENKSVQALTSAPSALS 657

Query: 586  LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L   S K  
Sbjct: 658  IMSMIDSTSGGPTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFGVSVKEQ 717

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVS--HMCPFNSAAFPDSLAIAKEGELTIGTI 698
              V A S R  + YS  + + ++   L  V       F+S    + +   +   L I +I
Sbjct: 718  RAVLALSSRSWLGYSDVQTMSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 777

Query: 699  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQT---- 753
            + +   L   SIPL    R +    +   F +    N   +  ++    +LL + T    
Sbjct: 778  EKLDNNLLQESIPLAYTSRSLVRHPEYPIFYVIGSDNNVLSPSTK---AKLLSESTTVNG 834

Query: 754  ---------FEF----------------------ISTYPLDTFEYGCSILSCSF-SDDSN 781
                     F +                      +S   L+  E   SI + SF S +  
Sbjct: 835  DNAELPPEDFGYPRGTNHWASCIQVVDPINAKAVMSRIELEDNEAAVSIAAVSFTSQEDE 894

Query: 782  VYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAA 838
             +  VGT   ++      T G I ++   E+GK L+ I + + +    +L  F G+LLA 
Sbjct: 895  TFLVVGTGKGMVVSPRSFTCGFIHIYRFQEEGKELEFIHKTKVEQPPLALLGFQGRLLAG 954

Query: 839  INQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            I   +++Y     D G R+L  +C       + + +QT+G  I+V D+ +S++ ++YK++
Sbjct: 955  IGPDLRIY-----DLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQ 1009

Query: 898  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVV 954
            E  +   A D    W +   ++D +   G +   N++ +R   K SE A ++  G   + 
Sbjct: 1010 ENNLIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPPKASEEADEDGSGAHLIH 1069

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNGVIGV-IA 999
               +L    NR    SLV      D   IPT I  T              + G +G+ I 
Sbjct: 1070 ERQYLQGAPNRL---SLVAHFYSQD---IPTSIQKTQLVAGGRDILVWTGLQGTVGMLIP 1123

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
             +  +   F + L+  L      + G +H  +R +         K  +DGDL E+F  L 
Sbjct: 1124 FVTRDDVDFFQTLEMQLTSQNPPLAGRDHLIYRGY-----YAPCKGVIDGDLCETFFLLP 1178

Query: 1060 RTRMDEISKTMNVSVEELCKRV 1081
              +   I+  ++ SV E+ +++
Sbjct: 1179 NDKKQAIAGELDRSVREIERKI 1200


>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
 gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
          Length = 1229

 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 270/1248 (21%), Positives = 492/1248 (39%), Gaps = 191/1248 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
            ++ Y +T  K T VTH+  GNF+  ++  +++++   +E+    P    +  ++   I+G
Sbjct: 1    MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             I  L  FR  G  +D++ + ++  +  +L++    + L             R    GQ 
Sbjct: 61   CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYIPSKNSLEKVHQETFGKSGCRRIVPGQY 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   P
Sbjct: 121  FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A    + + A + +    F E     N+        L+  A+ L+ VP 
Sbjct: 181  MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 241  GNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +G+
Sbjct: 296  KSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                           P A  + V +++   +  PI+   V D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   DD FD ++
Sbjct: 415  LANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + S  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   S+     N  QV++   G  LVY E+   G L E  + +++  EI C+
Sbjct: 533  --VNEWKAPGKKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---- 591
             +  + E    S   AVG+  D +VRI SL   N ++   +     P    LC  E    
Sbjct: 591  ALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLSPCSMQALPSPAES-LCLVEMGHT 648

Query: 592  -----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
                                   G  YL   L +G LL  +L+  +G+L D +   LG++
Sbjct: 649  ESTTNAGGADDDVPAQRSGGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSR 708

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ L     +    V A S R  + Y    +   + ++ + + +   F+S    + +   
Sbjct: 709  PVKLFRIKMQGAEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAI 768

Query: 689  KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKN------------ 734
                L I  ++ +  +  + + PL   PR  + H +  R     +  N            
Sbjct: 769  STNTLRILALEKLGAVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEDTKNTRKE 828

Query: 735  ------QSCAEESEMHF-------------------------------VRLLDDQTFEFI 757
                  +S A + E                                  +R LD    + +
Sbjct: 829  QMAEEMRSAAGDEERELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTM 888

Query: 758  STYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GK 812
             + PL   E     ++L  S + D   Y  VG A  L      ++G  +     D     
Sbjct: 889  FSVPLTQNEAIMSMTLLKFSVAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSA 948

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILAL 871
            L+ +   E      +L  F G+LLA   + +++Y     D G +++  +C   H     +
Sbjct: 949  LEFLHRTEIDEIPGALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIV 1003

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F
Sbjct: 1004 NIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKF 1062

Query: 932  NLFTVRKNSEGATDE------------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
               ++++     TD+            +RG L   G     E +  F  G ++M L  + 
Sbjct: 1063 GNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLS--GASQKSENICSFHVGEIIMSLQKAT 1120

Query: 980  V--GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN 1036
            +  G    +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS   
Sbjct: 1121 LIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS--- 1177

Query: 1037 EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                   KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1178 --SYYPVKNVLDGDLCEQYLSIDAVKQKSIAGDMFRTPNQICKKLEDI 1223


>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
            pombe 972h-]
 gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
            Full=Pre-mRNA-processing protein 12; AltName:
            Full=Spliceosome-associated protein 130
 gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
 gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
            pombe]
          Length = 1206

 Score =  212 bits (540), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 277/1229 (22%), Positives = 502/1229 (40%), Gaps = 179/1229 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL--TPQGLQPMLDVPIY 59
            S++ Y +T      V  SC  + +  +   ++IA  +R+ I+ +  T   +  +L+   +
Sbjct: 6    SLFLYSLTIQNSNYVQSSCAASLSGKKAQEIVIATESRLLIYKVDATDGRMNCILNQNCF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G I  +   R  G  +D+L + ++  +  +L+++ E ++L+            R    G+
Sbjct: 66   GIIRNVAPLRLTGFKRDYLVVTSDSGRITILEYNVEKNKLVPIYQETFGKSGIRRVVPGE 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GC 172
               ID   R  +I     + L  V+  D++  L    +  LE  +  +I F       G 
Sbjct: 126  YLAIDAKGRAAMIASVEKNKLVYVLNRDSEANL--TISSPLEAHKANNICFHLIGLDTGY 183

Query: 173  AKPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLI 220
            A P    L  D  +  H  T E     +            + V   WS+  +D  + +LI
Sbjct: 184  ANPIFAALEVDYSEIDHDSTREAFTSSEKVLSYYELDLGLNHVVKRWSKV-VDRNSYMLI 242

Query: 221  PVP-----PPLCGVLIIGEETIVYCS-ANAFKAIPI-------RPSITKAYGRVDADGSR 267
            PVP     P   G L+I    I Y     AF  IPI         +I+  + +V+++ + 
Sbjct: 243  PVPGGNDGP--SGTLVISNGWISYRHLQKAFHQIPILRRQAASANAISTPWNQVNSNSAN 300

Query: 268  ------------------YLLGDHAGLLHLLVITHEKE-KVTGLKIELLGETSIASTISY 308
                              YLL    G L  L I H+ +  V  L+++      +A  ++ 
Sbjct: 301  DGPLIVSAVLHKMKGSFFYLLQTGDGDLLKLTIEHDGQGNVVELRLKYFDTVPLAVQLNI 360

Query: 309  LDNAVVYIGSSYGDSQLIKL---------------------------NLQPDAKG-SYVE 340
            L    +++ + +G+ QL +                            N+    +G   + 
Sbjct: 361  LKTGFLFVATEFGNHQLYQFENLGIDDDELEITSLDFQAQDNEVGTKNVHFGVRGLQNLS 420

Query: 341  VLERYVNLGPIVDFCVVDLERQGQG-QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 399
            ++E   +L  + D  ++     G+  Q+ T  G   + SLR +R G+   E  + EL G 
Sbjct: 421  LVEEIPSLYSLTDTLLMKAPSSGEANQLYTVCGRGSNSSLRQLRRGLETTEIVASELPGA 480

Query: 400  K-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 458
               +W+L+ +  D +D+++++SF + T +L++   + +EE    GF S   TL       
Sbjct: 481  PIAIWTLKLNQTDVYDSYIILSFTNGTLVLSIG--ETVEEISDSGFLSSVSTLNARQMGR 538

Query: 459  NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD- 517
            + LVQ+    +R + +  +   +EWK P    V  +  N  Q+++A   G LVY E+ D 
Sbjct: 539  DSLVQIHPKGIRYIRANKQT--SEWKLPQDVYVVQSAINDMQIVVALSNGELVYFEMSDD 596

Query: 518  ---GILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK 573
               G L E +  + L   ++ L + P+ E    S    +    D +VR+ SL DL   T 
Sbjct: 597  VEGGQLNEYQERKTLTANVTSLALGPVQEGSRRSNFMCLAC-DDATVRVLSL-DL-YTTL 653

Query: 574  EHLGGE----------IIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDRK 621
            E+L  +          IIP +V      G+S  YL   L +G  L  ++++ +G+L D +
Sbjct: 654  ENLSVQALSSPANSLCIIPMNV-----NGVSTLYLHIGLMNGVYLRTVIDVTSGQLLDTR 708

Query: 622  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 681
               LG + + +   + KN   V A S R  + YS  + L  S +    + H   F S   
Sbjct: 709  TRFLGPRAVKIYPITMKNQNTVLAVSSRTFLAYSYQQNLQLSPIAYSAIDHASSFASEQC 768

Query: 682  PDSLAIAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQ---------EQSRTF---- 727
            P+ +   ++  L I T+D +Q  L     PL   PR+I            +  R F    
Sbjct: 769  PEGIVAIQKNTLKIFTVDSLQDDLKSDIYPLICTPRKIVKHPNFPVLYILQSERNFDSFK 828

Query: 728  ----------AICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
                      +    K      +S + F+ + D  + + I   PL   E   S+ +  F 
Sbjct: 829  YAQENGDVGSSYTKEKQNEHTSKSWVSFISVFDMISKKIIHESPLGDNEAAFSMTAAFFK 888

Query: 778  DDSNVYYCVGTAYVLPEENEPTKG---RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 834
            +    +   G+A  +  E         R+  F  E  KL+LI+  E  G   +L  F G+
Sbjct: 889  NRDEFFLVAGSATNMDLECRTCSHGNFRVYRFHDEGKKLELISHTEIDGIPMALTPFQGR 948

Query: 835  LLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
            +LA + + +++Y    K MLR     EL +       +   ++  +   IVV D   S+ 
Sbjct: 949  MLAGVGRFLRIYDLGNKKMLRKG---ELSAV-----PLFITHITVQASRIVVADSQYSVR 1000

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEER 948
             ++YK E+  +   A D    W +   ++D D   G +   N++ +R  ++     DEE 
Sbjct: 1001 FVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGDKFGNIWLLRCPEHVSKLADEEN 1060

Query: 949  GRLEVVGEYHLGEFVNRFRHG-SLVMRLPDSDV-----------GQIPTVIFGTVNGVIG 996
               +++   H   F+N   H   L+     +D+           G    +++  + G +G
Sbjct: 1061 SESKLI---HEKPFLNSTPHKLDLMAHFFTNDIPTSLQKVQLVEGAREVLLWTGLLGTVG 1117

Query: 997  VIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
            V    +  E   F ++L+  LRK    + G +H  +RS+    K V     +DGDL E +
Sbjct: 1118 VFTPFINQEDVRFFQQLEFLLRKECPPLAGRDHLAYRSYYAPVKCV-----IDGDLCEMY 1172

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L     + I+  ++ ++ E+ K++E+ 
Sbjct: 1173 YSLPHPVQEMIANELDRTIAEVSKKIEDF 1201


>gi|401407861|ref|XP_003883379.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
 gi|325117796|emb|CBZ53347.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
          Length = 1233

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 272/1251 (21%), Positives = 485/1251 (38%), Gaps = 199/1251 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
            Y +T  KPT + H+  GNF++P+   +++++   +E+     QG LQ +    ++G I +
Sbjct: 5    YHLTLQKPTAIVHALQGNFSAPRAQEVVVSRGRVLELLRPDDQGKLQAIASTEVFGIIRS 64

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
            +  FR  G  +D+L I ++  +  ++Q+ AE +E   R   +   + G R    G+   +
Sbjct: 65   IAAFRLTGANRDYLAIGSDSGRLVIVQFSAEKNEF-ERVHCETYGKTGIRRVVPGEYLAV 123

Query: 124  DPDCRLIGLHLYD--GLFKVIPFDNKGQLKEAFNIRLEELQVL--DIKFL-YGCAKPTIV 178
            DP  R + +   +      ++  DNK QL  +  +   +   +  D+  +  G   P   
Sbjct: 124  DPKGRTLMVAAVERQKFVYIVNRDNKAQLTISSPLEAHKSHAICHDLCGIDMGFDNPLFA 183

Query: 179  VLYQ--DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEET 236
             L Q  ++ D +         K     E     N++   A L  PVPP    ++ +    
Sbjct: 184  SLEQNVESTDRKPATPGVTVPKGVCLWEMDLGLNHVIKKATL--PVPPSAHCLIPVPGGG 241

Query: 237  -------IVYCSANAFK-----------AIPIRPSITKAYGRVDADGSRYLLGD------ 272
                   ++ C  N              AIP R       G V    + + + D      
Sbjct: 242  GADGPSGVLVCCGNFLLYKKPDHEEVSCAIPRRLETGSDRGLVVVAFAVHRMKDFFFILI 301

Query: 273  --HAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN- 329
                G ++ + I+H++  V  +         +A+ +  L +  +++ S +G+    +   
Sbjct: 302  QTEYGDIYKIEISHDEGVVREIVCRYFDTVPVANALCVLKSGYLFVASEFGNHLFYQFTG 361

Query: 330  -----LQPDAKGSY-----------------VEVLERYVNLGPIVDFCVVDLERQGQGQV 367
                   P    S+                 + +++   +L PI D  V+D +  G  QV
Sbjct: 362  IGSDASDPRCSSSHPLGREAIIAFKPRPLKNLALVDELQSLSPITDLKVLDAQGTGAPQV 421

Query: 368  VTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETR 426
                G     +LRI+++G+G+ E A  EL G  + +W+ + S    FD +++V+F  E  
Sbjct: 422  YVLCGKGPRSALRILQHGLGVEEMADNELPGRARAVWTTKLSHQSAFDGYIIVAF--EGS 479

Query: 427  ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 486
             L + + D +EE     F +   +L       +  +QV    +R +  + R   NEW++P
Sbjct: 480  SLVLQIGDTVEEVTDSLFLTNVSSLLVALMYDDSFIQVHETGIRHILKSKRV--NEWRTP 537

Query: 487  PGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEYEISCLDINPIGENPS 545
             G  +  A AN  Q++++  GG L+  E+ +   L E     +  E +C+ +  I +   
Sbjct: 538  GGRRIKAADANERQLVISLAGGELILFEVDESHTLVETARRNINVETTCMSMQAIPKGRL 597

Query: 546  YSQIAAVGMWTDISVRIFSL-PDLNL--ITKEHLGGEIIPRSVLLCAFEGIS-------- 594
             +   AVG   D  VRI SL  D NL  +  + L     P SV L    G+         
Sbjct: 598  RASFLAVG-GLDNMVRILSLEKDRNLRQLATQLLPNNATPESVCLATLTGLGAHGKDAGK 656

Query: 595  -------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
                   YL   L  G ++  +++   G L D++   LG + +     + +    + A S
Sbjct: 657  SEDNGVLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPAILALS 716

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 707
            ++  + Y+   KL  + +N   +  +  F S    D       G L I     + +   +
Sbjct: 717  EKSWLCYTFQHKLHCTPLNYDPLECVASFCSEQCTDGFVAIAGGSLRIFRCQRLGETFSQ 776

Query: 708  S-IPLGEHPRRICH--------------------QEQSRTFAICSLKNQSCAEESEMHFV 746
            + +PL   PR +                        ++   AI    + +  E ++    
Sbjct: 777  TLLPLSFTPRAMAALPHISATESQGAVDAAGVGPSRRAAALAIVEADHNAYDESTKAEIR 836

Query: 747  RLL----------------DDQTFEFISTYPLDTFEYGC--------------------- 769
            R L                DD   E    + L   +YG                      
Sbjct: 837  RALRGIKVNQEEEEEKEETDDMQLEEKEQHDLPEDQYGTFKAGPGKWGSCIRIVNPLMAM 896

Query: 770  SILSCSFSDDSNVYYC------------VGT--AYVLPEENEPTKGRILVFIVEDG-KLQ 814
            +I   S   D     C            VGT  A  L     P +  I VF  +D   L 
Sbjct: 897  TIDKVSLETDEAALSCCYCEMEGLPLLVVGTVTAMTLKPRKVP-QASIKVFSYDDKFSLN 955

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL-YV 873
            L+     +    +L  F G LLA +  K++LY       G + L  +C +      + ++
Sbjct: 956  LVHSTPVEDYPMALAPFRGMLLAGVGHKLRLYAL-----GKKRLLKKCEYKNLPCGVAFI 1010

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
            +  GD + VGDL +S+ ++ Y+  E      A D    W++  E+LD   ++ A+   ++
Sbjct: 1011 RVAGDRLFVGDLRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFDSV 1070

Query: 934  FTVRKNSEGATDE--------ERG----------RLEVVGEYHLGEFVNRFRHGSLVMRL 975
            F  R  SE   DE         RG          +L+ +  +H+GE V      +L    
Sbjct: 1071 FICRVPSEAKQDELGDTTGLRLRGDTTYLTDKCFKLQSLLHFHIGEVVTALERATLT--- 1127

Query: 976  PDSDVGQIPTVIFGTVNGVIGVIASL--PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
                 G   ++I+GT+ G IG  +     HE  LF   L+  LR     +GG  H  +RS
Sbjct: 1128 ----AGASESIIYGTIMGSIGAFSPFLTKHELDLFTH-LEMVLRSEKPPLGGREHIMFRS 1182

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            + +      AKN +DGDL ES+  L       I++    +  ++ K +E++
Sbjct: 1183 YYHP-----AKNTVDGDLCESYALLPYDVQKRIAQDFEKTPADILKHLEDI 1228


>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
 gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
          Length = 1215

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 266/1239 (21%), Positives = 500/1239 (40%), Gaps = 185/1239 (14%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
            M ++N+++   + T +TH+  G F   ++  ++++K   +E+    P    +  +L   +
Sbjct: 1    MYLYNFIL--QRATGITHAVHGCFAGTKQQEILLSKGKSLELVRPDPNTGKVHTLLQTEV 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G I +L  FR  G  +D+  + ++  +  +L+++A  ++L             R    G
Sbjct: 59   FGVIRSLMSFRLTGGTKDYAVVGSDSGRIVILEYNAAKNQLEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D++ +L  +  +   +   L    +    G  
Sbjct: 119  QFLAIDPKGRAVMIGAIEKQKLVYILNRDSEARLTISSPLEAHKSSTLTYHMVGVDVGFE 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    T E A K +    F E     N+        L+  A+ LI V
Sbjct: 179  NPMFACLEIDYEEADLDPTGEAAAKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISV 238

Query: 223  P---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 239  PGGNDGPSGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L+    G +  + +  + + V  +K++       A+ +  L    +++   +G+
Sbjct: 296  KSMFFFLVQTEQGDIFKVTLETDDDVVAEIKLKYFDTVPPATAMCVLKTGFLFVACDFGN 355

Query: 323  SQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDL 359
              L ++             +  P  +G       R +          +  PI+   V DL
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVMVDEIHSFAPILGCQVADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     S+R++R+G+ ++E A  EL G    +W+++   DD FD +++
Sbjct: 416  ANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   D +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--DTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N+ QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKAPGKKTIIKCAVNSRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMA 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE---- 591
            +  +      +   AVG+  D +VRI SL   + ++   +  + +P +   LC  E    
Sbjct: 592  LGSVPAGEQRAWFLAVGL-ADNTVRIISLDPADCLSPRSM--QALPSAAESLCIVEMGTG 648

Query: 592  -----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +
Sbjct: 649  ESNEEGTVSTAGCFYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGS 708

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S R  + Y    +   + ++ + + +   F+S    + +       L I  ++ 
Sbjct: 709  EAVLAMSSRTWLSYYYQNRFHLTPLSYETLEYASGFSSEQCAEGIVAISTNTLRILALEK 768

Query: 701  IQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE---- 755
            +  +  + + PL   P+R     ++    I    + +  EE++    + + D+  E    
Sbjct: 769  LGAVFNQITFPLEYTPKRFLIHNETGKLIISETDHNAYTEETKNIRKKQMADEMREAAGE 828

Query: 756  ------------FIS-TYPLDTF---------------------------------EYGC 769
                        FI+   P D F                                 E   
Sbjct: 829  DEQELANEMADAFINEVLPEDQFSSPKAGAGMWASQIRVMDPINGHTYSKVQLAQNEAVM 888

Query: 770  SILSCSFSDDSNVYYCVGTAYVLPEENEPTKG---RILVFIVEDGKLQLIAEKETKGAVY 826
            S+    F+ D   Y   G A  L    + T G    +  +     +L+     E   A  
Sbjct: 889  SMALVRFTVDQKWYVVAGVAKDLALNPKITNGGFIDVYKYDFHTHQLEHYHRTEIDDAPG 948

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGD 884
            ++ +F G++L  I + +++Y     D G ++L  +C  + HI    + +Q  G  + V D
Sbjct: 949  AICSFQGRVLVGIGKVLRIY-----DLGKKKLLRKC-ENKHIPNQIVNIQAMGSRVFVSD 1002

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEG 942
            + +SI  + YK  E  +   A D +  W++   +LD D    A+   N+  +R   +   
Sbjct: 1003 VQESIYCVKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNVSVLRLPHSVSD 1062

Query: 943  ATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
              DE         +RG L       E V  +HLGE +   +  +L+        G   ++
Sbjct: 1063 DVDEDPTGNKALWDRGLLNGASQKAENVCTFHLGETIMSLQKATLI-------PGGSESL 1115

Query: 987  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            I+ T++G +G +      E + F + L+ ++R     + G +H  +RS+         KN
Sbjct: 1116 IYATMSGTVGALVPFTSREDFDFFQHLEMHMRNENPPLCGRDHLSFRSY-----YYPVKN 1170

Query: 1046 FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +DGDL E F  +   +   I+  +  +  E+ K++E++
Sbjct: 1171 VMDGDLCEQFTSMDPAKQKSIATDLGRTPNEVAKKLEDI 1209


>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
          Length = 1214

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 272/1238 (21%), Positives = 527/1238 (42%), Gaps = 192/1238 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTS-PQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRI 62
            Y +T    + +  +  G+F   P++  + +A+   +++    P+   +  M    ++G I
Sbjct: 4    YNLTLQGSSAINQAIHGSFCGLPKQQEVCVARGNLLQLLFCDPKTGKVHVMCSHNVFGII 63

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121
             +L  FR  G ++D++ + ++  +  +L+++ +      R   +   + G R    GQ  
Sbjct: 64   RSLLAFRLTGGSKDYIVVGSDAGRIVILEYNPQKV-CFERVHQETFGKTGCRRIVPGQHL 122

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
             +DP  R  LIG      L  V+  D    L  +  +   +   +    +    G   PT
Sbjct: 123  AVDPKGRAILIGAVERQKLVYVMNRDAAANLTISSPLEAHKSHCICYSIVGVDVGFENPT 182

Query: 177  IVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
               L  D             NK  + +  YE+ L     V   +++  +D G ++LI VP
Sbjct: 183  FACLEVDYEEVDHDPSGHLANKIPQTLTFYELDLGLNHVVR-KYAEPLVDKG-NILISVP 240

Query: 224  ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                   GV++  E  +V+   N      IR  I +    +D D  R             
Sbjct: 241  GGQEGPSGVIVCCENYLVF--KNLGDQPDIRCPIPRRRNELD-DCDRTVMIVCTATHKTK 297

Query: 268  ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
                +L+    G +  + +  E + VT LKI+      +A+ +  L    ++  S +GD 
Sbjct: 298  LMYFFLVQTDQGDIFKVTLESEHDIVTELKIKYFDTIPLANAMCILKTGFLFTASEFGDH 357

Query: 324  QLIKL--------------NLQPDAKGSY---------VEVLERYVNLGPIVDFCVVDLE 360
             L ++               +Q D   ++         + V+++  +L P++   + DL 
Sbjct: 358  HLYQIAHLGDEDDEPEYSSRMQLDEGETFFFAPRGLLNLAVVDQIDSLCPLISCHIDDLA 417

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     +L+++RNG+ + E A  EL G    +W+++ + DD +D+ +VV
Sbjct: 418  NEDAPQLYALCGRSARSALKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKYDSHIVV 477

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     + L+QV    +R + +  R  
Sbjct: 478  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCGLIGDDALLQVYPDGIRHIRADRRV- 534

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWK+P   ++     N  QV +A  GG +VY E+   G L E  +  +L  ++ C+ +
Sbjct: 535  -NEWKAPGKRTIIKCALNRRQVAIALAGGEIVYFELDVTGQLNEYTERRELPADVLCMSL 593

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAF---E 591
            + I E    S+   VG+  D +VRI SL     L  ++ + L  E  P S+++      E
Sbjct: 594  SEIPEGELRSRFLTVGL-ADKTVRIISLDPQDCLAPLSMQALPSE--PESIIVLEMFGGE 650

Query: 592  GIS----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
            G S    +L   L +G LL   ++  TGELTD +   LGT+ + L     ++   + AAS
Sbjct: 651  GQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTRSVNLFRVRIQSKDAIMAAS 710

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 707
             R  ++Y+   +   + ++   + +   F+S   P+ +    E  L I +++ +  +  +
Sbjct: 711  SRAWLLYNYQSRFHLTPLSYTALEYAAGFSSEQCPEGIVAIAENTLRILSLEKLGAVFNQ 770

Query: 708  SI-PLGEHPRR-ICH---------------------QEQSRTFAICSLKNQSCAEESEMH 744
            ++ PL   PRR I H                     QE+ +  A   ++    A+E++  
Sbjct: 771  AVYPLDYTPRRMIIHKASGNLIVIETDHAAFTAKGKQERRKQLANELMEVAKEADEADEQ 830

Query: 745  FV-------------------------------RLLDDQTFEFISTYPLDTFEYGCSILS 773
             V                               R++     E +S +P    E   S+  
Sbjct: 831  AVKEMAEAILTEKVNEREMGAPKNQKGKWASTVRIMRSSDGETLSLFPFAEDEAAFSLAM 890

Query: 774  CSFSDDSNVYYC-VGTAYVLPEENEPTK---GRILVFIVED--GKLQLIAEKETKGAVYS 827
              F + ++  +  VG    L  + +P K   G I  F++ +   KL+ +    T   V +
Sbjct: 891  VQFQNQNDAQFILVGCGLGL--QLKPRKSHGGSIYTFLLANNGSKLEFLHRTPTDEVVNA 948

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLM 886
            ++ F G  L  + +KI+LY     D G ++L ++C +    +  + +++ G  IVV D  
Sbjct: 949  VHDFRGMALVGVGKKIRLY-----DLGKKKLLAKCENKQLPVQVVDIRSMGQRIVVSDSQ 1003

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 946
            +S+  + YK ++  +     D +  +++ + ILD D  +   + F    V +  +G T+E
Sbjct: 1004 ESLHFMRYKKQDNQLSIFCDDTSPRFVTCICILDYDT-VAVGDRFGSIAVLRLPKGVTEE 1062

Query: 947  ------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 987
                        +RG L       E +G++++G+ V   +  SLV        G    ++
Sbjct: 1063 VQEDPTGVRALWDRGNLNGASQKVEHIGQFYVGDTVTSMQKTSLV-------PGANDCLV 1115

Query: 988  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 1046
            + T++G IG++   +  +++ F + L+ +LR     + G +H  +RSF    K +     
Sbjct: 1116 YTTISGTIGMLVPFVSRDEFDFFQNLEMHLRVEFPPLCGRDHLAFRSFYFPVKCI----- 1170

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +DGDL E +  +   +   +++ +     E+ K++E++
Sbjct: 1171 IDGDLCEQYALMPLDKQKAVAEELGRKPAEIHKKLEDI 1208


>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 1197

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 270/1224 (22%), Positives = 513/1224 (41%), Gaps = 180/1224 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVP 57
            +++ Y +T   P+ ++ S VG F+  ++  +I+A+ +R+E  LL P      ++ +L   
Sbjct: 7    NMFLYSLTLLPPSGISASVVGQFSGQKQQEIIVARGSRLE--LLKPDPNLGKIKSLLSHD 64

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTD 116
            ++G I TL  FR  G  +D L + ++  +  +L++  +S+   ++   +   + G R   
Sbjct: 65   VHGIIRTLVGFRLAGTNKDHLIVGSDSGRITILEYKPDSNAF-SKVHQETYGKSGVRRVV 123

Query: 117  NGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YG 171
             GQ   +DP  R  +I     + L  V+  D+   L  +  +   +   L    +    G
Sbjct: 124  PGQYLAVDPKGRATMIASIEKNKLVYVLNRDSATNLTISSPLEAHKSCSLVFHLIGMDVG 183

Query: 172  CAKPTIVVLYQDNKDA---------RHVKT----YEVALKDKDFVEGPWSQNNLDNGADL 218
               P    L  D  +A         R ++     YE+ L     V   WS + +D  A+L
Sbjct: 184  YENPVFAALEVDYTEAESDPSGKAYREIQKVLTYYELDLGLNHVVR-KWS-DPVDRKANL 241

Query: 219  LIPVP-----PPLCGVLIIGEETIVYC-SANAFKAIPIRPSITKAYGRVDADGSR----- 267
            L+ VP     P   G L+  E +I Y         IPI   I    G ++    +     
Sbjct: 242  LVTVPGGSDGP--SGALVCTEGSIFYKHKGKKTHRIPIPTRI----GSLENSQKKQIIVS 295

Query: 268  -----------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYI 316
                       +LL +  G L  + I     +V  LKI+      +++ +S L +  +++
Sbjct: 296  SVVHKMRGAFFFLLQNEDGDLFKVTIDSNDGEVESLKIKYFDTVPVSTGLSILKSGFLFV 355

Query: 317  GSSYGDSQLIK--------------------LNLQPDAKGSYVE--------VLERYVNL 348
             S YG+  L +                    L+L    + SY          +++   ++
Sbjct: 356  ASEYGNHHLYQFEKLGDDNNEIEFSSVDFPVLDLNEGYEPSYFRPRSLENLLLVDDLNSM 415

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRS 407
             P++D  +++L  +   Q+    G     + R +R G+ +NE  +  L G    +W+ + 
Sbjct: 416  NPLMDSKILNLTDEDAPQIYALCGRGPRSTFRTLRYGLEVNEIVASGLPGSPTAVWTTKL 475

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            ++ D +D ++V+SF++ T +L++   + +EE    GF S + TL       + L+QV   
Sbjct: 476  TSSDQYDAYIVLSFVNGTLVLSIG--ETVEEVSDTGFLSSSPTLAVQQLGDDALIQVHPK 533

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK-H 525
             +R + +  R   NEWK+P   S+   T N  QV++A   G +VY E+ D G L E +  
Sbjct: 534  GIRHIQADKRV--NEWKTPQHRSIVQVTTNQRQVVVALSNGEIVYFELDDEGNLNEYQDR 591

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII---P 582
             Q+   ++ L I  + E        AVG   D +VRI SL   N  T E L  + +   P
Sbjct: 592  KQMTGSVTSLSIGHVPEGRQRHPFLAVGC-DDSTVRIISLEPEN--TLESLSVQALTAPP 648

Query: 583  RSVLLCAFEG----ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
             S+ + + +       YL   L +G  L  +L + TG+L D +   LG++P+ L + + +
Sbjct: 649  NSLCIMSMKDGNIETFYLHIGLFNGVYLRSVLELSTGQLKDTRTRFLGSRPVKLFSVTIQ 708

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
            N   V A S RP + Y  N  L    +    + +   F+S    + +   +  +L I  +
Sbjct: 709  NQLSVIALSSRPWLSYIINASLHLVPLIYDSLEYCWGFSSEQCSEGIVGIQGQDLKIFMV 768

Query: 699  DDIQK-LHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMHF----------- 745
            + +   L   SI L   PRR I H ++   + I S  N     E +              
Sbjct: 769  ERLDNVLKQDSISLMYTPRRFIKHPDEHIFYIIESDHNVLPLSERQKRVEGLQNGDHILL 828

Query: 746  -----------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-VYYCVG 787
                             + +LD  + + ++   LD  E   SI   +F + ++ ++  +G
Sbjct: 829  PEDIGLPRGLSGNWASCITILDPLSKKILTRIELDDNEAAFSIAMVTFKNQNDEIFLAIG 888

Query: 788  TA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +     + P+        I  FI +   ++L+ + E      +L  F G+LLA + + ++
Sbjct: 889  SGKNVILAPKSFSAAYISIYRFIDQGKSIELVHKTEVDDIPLALLGFQGRLLAGLGKMLR 948

Query: 845  LYKWMLRDDGTRELQSECGHHGHILA-----LYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
            +Y+  ++         +C     + A     + + T+G  I++ D+ +SI   +YK+ E 
Sbjct: 949  IYEMGMK---------KCLRKCEVRAVPNCIVQLHTQGSRIIIADIQESIHFAVYKYLEN 999

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------- 949
             +   A D    W +   +LD +     +   N +  R   + SE A ++  G       
Sbjct: 1000 RLIVFADDVIPRWTTTSTMLDYETVAAGDKFGNFWINRCPLEVSESADEDPSGAQLIHEK 1059

Query: 950  --------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IAS 1000
                    RL+++  +++G+         L+        G    +++  + G IG+ +  
Sbjct: 1060 SYLFGAAKRLKMLAHFYIGDTFTSMHKVQLI-------AGGRDIIVYTGMMGSIGIFLPF 1112

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 1060
            +  E   F ++L+  +R     + G +H  +R +      V  K+ +DGDL E FL L  
Sbjct: 1113 VGREDVDFFQQLEALMRTEDLSLIGRDHLMYRGY-----YVPVKSVVDGDLCERFLMLPY 1167

Query: 1061 TRMDEISKTMNVSVEELCKRVEEL 1084
             +   I+  ++  + E+ K++E++
Sbjct: 1168 NKKQVIANELDREISEIAKKIEDM 1191


>gi|313235544|emb|CBY10999.1| unnamed protein product [Oikopleura dioica]
          Length = 1185

 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 264/1200 (22%), Positives = 504/1200 (42%), Gaps = 145/1200 (12%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  K TN+TH+  GN++  ++  + +A+ T +EI    P    +  +     +  I 
Sbjct: 4    YNLTLQKSTNITHAVHGNYSGQKQQEIAVARGTLLEIIKPDPNTGKIHTICSRECFSLIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D++ + ++  +  +L+++ +   L           + R    GQ    
Sbjct: 64   SLISFRLTGGTKDYIVLGSDSGRISILEYNPDKGSLERVHCETFGKSMARRIVPGQFLAH 123

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-----YGCAKPTIV 178
            DP  R I +   +    V   +   Q +   +  LE  +   I F       G   P   
Sbjct: 124  DPKGRAIMVAACEKQKLVYILNRDAQARLTISSPLEAHKSSTIHFYPVGLDVGFENPVFA 183

Query: 179  VLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP---P 224
            V+  D +DA    T E A + K    F E     N+        L+  A++LIPVP    
Sbjct: 184  VIELDYEDADADPTGEAAQEAKQSLTFYELDLGLNHVVRKYTDPLECAANMLIPVPGGSD 243

Query: 225  PLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------------- 267
               GV++  E  ++Y   N      IR  I +    +D D  R                 
Sbjct: 244  GPGGVIVCAENYLIY--KNFGDQPDIRFPIPRRRNDLD-DPERGMIIVAHATHKTRSMFF 300

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +LL    G L  + +  E++ VT ++++      ++S++  L    +++   +G+  L +
Sbjct: 301  FLLQTEQGDLFKVTLETEEDIVTEIRLKYFDTVPVSSSLCVLRTGFLFVAGEFGNHNLYQ 360

Query: 328  L-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDLERQGQ 364
            +             + +P  +G       R +          +L P+++  V DL  +  
Sbjct: 361  ITRLGEDDDEPEFSSAEPLEEGETFFFTPRGLRNLALTDEMDSLSPVLNCEVADLANEDT 420

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFIS 423
             Q+    G     +LR++R+G+ ++E A  EL G    +W++++S D   D++++VSF++
Sbjct: 421  PQLYVTCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKTSADADHDSYIIVSFVN 480

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
             T +L++   + +EE    GF   T TL       + LVQ+    +R + S  R   NEW
Sbjct: 481  ATLVLSIG--ETVEEITDSGFLGTTPTLSSGLMGEDALVQIYPEGIRHIRSDRR--VNEW 536

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIG 541
            ++P    +     N  QV++A  GG +VY E+   G L E  +  +   EI  LD+  + 
Sbjct: 537  RAPDRKQIVRCACNRQQVVIALTGGEIVYFEMDPTGQLNEYTERREFGSEIIALDVGDVP 596

Query: 542  ENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 600
                  +  AVG+ +D +VRI SL P+  L  +       +P+ V +   +G   L   L
Sbjct: 597  AGEQRCRFLAVGL-SDGTVRIISLDPNDCLQPRTMQALPTVPQDVAITEHKGQYVLQIGL 655

Query: 601  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660
             +G LL   ++  TGE++D +   LGT+ + L    ++    V A S R  + Y   ++ 
Sbjct: 656  QNGVLLRTTIDSVTGEISDTRTRYLGTKAVKLYKVVTEGENSVLAVSSRSWLSYRHQQRF 715

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL--HIRSIPLGEHPRRI 718
              + ++ + +     F+S   P+ +       L I  ++ +  +   +R+ PL   PR+ 
Sbjct: 716  HLTPLSYEALDSATGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVRN-PLQLTPRKF 774

Query: 719  CHQEQSRTFAIC---------SLKNQSCAEESEMHFVR-LLDDQTF-----------EFI 757
                 +    I            K Q  A E    F++  L +  F             I
Sbjct: 775  VIHPDTANLVIAESDHNAFTEETKKQPLAAEMAAAFLKEELPESDFGSPRAGQGMWASKI 834

Query: 758  STYPLDT--------FEYGCSILSCSFSDDSNV-----YYCVGTAYVL---PEENEPTKG 801
            S    +T         E G  I S   +   +V     Y  VGT+  +   P +++   G
Sbjct: 835  SIISPETGGTLHHVWLEQGQGIHSMCLTKFQSVGMIDWYLLVGTSNSMILNPRQSQ--GG 892

Query: 802  RILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTR 856
             + V+ +  G + + +    T+ A  ++  F G++L  +   +++Y    K MLR    R
Sbjct: 893  SLHVYRIHAGERFEYLHTTYTEDAPTAITPFQGRVLIGVGNLLRIYDLGKKKMLRKCELR 952

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
             + +            + T G  I+  D  +S   + Y+ +E  +   A D    W++A 
Sbjct: 953  SIPNRVTK--------IITAGQRIIAFDQQESAFFIKYRVKENQLTIFADDTFPRWVTAA 1004

Query: 917  EILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------RLEVVGEYHLGEFVNRFR 967
             +LD    + A+   ++  +R   + +E   D+  G      R  + G     E +N F 
Sbjct: 1005 CMLDYWTVVIADKFGSVSVIRLPAETNENTQDDPSGAKALWSRGNLNGASQKAETLNNFF 1064

Query: 968  HGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVG 1024
             G ++  +  + +  G    +++ T++G IG++     +E   F + L+ ++R+    + 
Sbjct: 1065 VGDMITSIQKTILIPGGGECIVYATMSGRIGILVPFASNEDADFFQSLEMHMRQEHTFLT 1124

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            G +H  +R +   +K++     +DGDL E+F  L + +   I++ M+  + E+ K++E++
Sbjct: 1125 GRDHLAFRGYYYPQKSI-----VDGDLCEAFSLLGQDQQKGIAEEMDRQLAEVSKKLEDI 1179


>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
 gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
          Length = 1217

 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 293/1236 (23%), Positives = 507/1236 (41%), Gaps = 189/1236 (15%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAK-CTRIEIHLL--TPQGLQPMLDVPIYGRIAT 64
            +T   PTNV+ + VG+F+  +   ++  +  T++EI  L  T   L  ++    +G I  
Sbjct: 6    LTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAFGTIRN 65

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
            +  FR  G  +D++   ++  +  +L++    +        +V  + G R    GQ   +
Sbjct: 66   IAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESLYQEVFGKSGSRRIVPGQFLAV 125

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  L+G      L  V+  + +G+L  +  +   +   L    +    G   P   
Sbjct: 126  DPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHVIGVDQGYDNPLYA 185

Query: 179  VLYQDNKDARHVKT---YEVALKDKDFVE---------GPWSQNNLDNGADLLIPVP--- 223
             L  D  ++    T   YE A K   F E           WS+   D  A+LL+ VP   
Sbjct: 186  ALEIDYSESDQDPTGEAYENAQKHLTFYELDLGLNHVVRKWSEPT-DRRANLLVQVPGGQ 244

Query: 224  ---------PPLCGVLIIGEETIVY--CSANAFKAIPIRPSITKAYGRVDADGSR----- 267
                     P   GVL+  E+ I++     +A + IPI         R   D SR     
Sbjct: 245  NANSDRFEGP--SGVLVCTEDHIIWKHMDVDAHR-IPIPRRRNPLVQR--GDKSRGLIIV 299

Query: 268  ------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
                        +LL    G L+ + I H  E V  LKI+      +A+++  L    +Y
Sbjct: 300  SAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIY 359

Query: 316  IGSSYGDSQLIKLNLQPDAKG-------SYVE----------------------VLERYV 346
            + S + D  L +     +  G        Y E                      +++   
Sbjct: 360  VASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDSVP 419

Query: 347  NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 403
            +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L G+   +W
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVTEMVSSPLPGVPTNVW 479

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            +L+ + DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGNAGLLQ 537

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 522
            V    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 538  VHPYGLRHIRAADRV--DEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSE 595

Query: 523  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 596  YQEKKALPGNATCVTIAEVPEGRRRTPFLAVGC-DNQTVSIISLEPDSTLDTLSLQALTA 654

Query: 581  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 655  PPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
               + +    V A S R  ++Y+    L    +    + +    ++A  PD L       
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICH---------QEQSRTFAICSLKNQSCAEES 741
            L I +I  + +KL   S PL   PR+ I H         +   RT++  +++     +ES
Sbjct: 775  LRIFSIPKLGEKLKQDSTPLTYTPRKFISHPFNPVFYMIEADHRTYSKGAIERIVKQKES 834

Query: 742  E--------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
            E                             VR+LD    E I T+ LD  E   SI    
Sbjct: 835  EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTFDLDEDEAAFSIAIAY 894

Query: 776  FS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 831
            F       +  VGT      + +  K G + V+ I E G+ L+ + + +T      L  F
Sbjct: 895  FERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRVLEFLHKTKTDDIPLCLAGF 954

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 890
             G LLA + + ++LY+      G + L  +C ++G   A+  +  +G  I+VGD+ +S  
Sbjct: 955  QGFLLAGVGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTF 1009

Query: 891  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 942
              +Y+    +I  R     A D    W++ V  +D +     +   N+F  R +   SE 
Sbjct: 1010 YCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEK 1065

Query: 943  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-------IFG 989
              D+  G      +  ++G  H  E +  +  GS+V     + + +IP V       ++ 
Sbjct: 1066 VDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVV-----TSITKIPLVAGGRDVLVYT 1120

Query: 990  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            T++G +G +   +  +   F+  L+ ++R     + G +H  +R +      V  K  +D
Sbjct: 1121 TISGAVGALVPFVSPDDIEFMSTLEMHMRTQDISLVGRDHIAYRGY-----YVPIKGVVD 1175

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1176 GDLCESFSLLPYPKQQAIASDLDRSVGDVLKKLEQM 1211


>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
            occidentalis]
          Length = 1211

 Score =  209 bits (532), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 262/1230 (21%), Positives = 504/1230 (40%), Gaps = 179/1230 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T    T +T SC GNF+  ++  + +AK   +EI  L P      +  +    ++G 
Sbjct: 4    YNLTLQHATAITASCHGNFSGHKQQEIAVAKGKILEI--LKPDSNTGKVHTVYATDVFGV 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G ++D+L + ++  + C+L+++   + L    M        R    GQ  
Sbjct: 62   IRSLMSFRLTGGSKDYLIVGSDSGRICILEFNPAKNVLEKIHMETFGKSGCRRIVPGQYL 121

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
             +DP  R  +IG      L  ++  D+  +L  +  +   +   L    +    G   P 
Sbjct: 122  AVDPKGRAVMIGAVEKQKLVYILNRDSNARLTISSPLEAHKSNTLVYHMVGVDVGFENPV 181

Query: 177  IVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVPPP 225
               +  D ++A +  T E A K +    F E     N+        L+  ++ LI VP  
Sbjct: 182  FACIELDYEEADNDHTGEAAKKAQQSLTFYELDLGLNHVVRKYSEPLEEPSNFLIAVPGG 241

Query: 226  L---CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------------- 267
            +    GVL+  E  I Y   N      IR  I +    +D D  R               
Sbjct: 242  VDGPSGVLVCSENFITY--KNLGDQADIRCPIPRRRNDLD-DPDRGMLFVCSTQHKTKSM 298

Query: 268  --YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
              +L     G +  + +  + + VT +K++      +A T+  L +  +++ S +G+  L
Sbjct: 299  FFFLAQTEQGDIFKITLEFDDDAVTEIKLKYFDSLPVAQTMHVLKSGFLFVASEFGNHSL 358

Query: 326  IKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDLERQ 362
             ++             ++ P  +G     L R +          +L PI+   V DL  +
Sbjct: 359  YQIAHLGDNTDEPEFSSIFPLEEGDTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTNE 418

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
               Q+    G     ++R++R+G+ ++E A  EL G    +W+++   DD +D ++VVSF
Sbjct: 419  DTPQLYAACGRGPRSTMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVSF 478

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            I+ T +L++   + +EE    GF   T TL CH   ++ LVQ+    +R + +  R   N
Sbjct: 479  INATLVLSIG--ETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRR--VN 534

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTE-VKHAQLEYEISCLDINP 539
            EW++     +     N  QV++A  GG L+Y E+   G L E  +  ++  ++ C+ +  
Sbjct: 535  EWRTSGKKLIVKCAVNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGS 594

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG--EIIPRSVLLCAFEGIS--- 594
            +      ++  AVG  +D +V + SL   + ++   + G  E  P S+ +    G     
Sbjct: 595  VPAGEQRTKFLAVGS-SDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVDMSGHEEGS 653

Query: 595  -----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
                 YL   L +G L   +L+  TG+++D +   LG++ + L     + T  V A S R
Sbjct: 654  GSSALYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGTDAVLAMSSR 713

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-S 708
              + Y    +   + ++   + +   F S   P+ +       L I  ++ +  +  + S
Sbjct: 714  CWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILALEKLGAVFNQLS 773

Query: 709  IPLGEHPRRICHQEQSR------------TFAICSLKNQSCAEE---------------- 740
             PL   PR     ++S+            T ++   + Q  AEE                
Sbjct: 774  APLSFTPRSFVIDKKSQKLIVIETDHNAYTDSVKEKRKQHVAEEMIEAAGEAEQEMAAEL 833

Query: 741  ---------SEMHF-------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 778
                      E  F             +R+L+      +    L+  E   S+   +F  
Sbjct: 834  AAAFLSEDLPESQFGAPRAGKKHWASVIRILNPSDLSTVYKIQLEQNEAAVSVALVNFDK 893

Query: 779  DSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
             ++    VG +  L   P E   +       + +  +L+L+          ++  F  ++
Sbjct: 894  STDPILLVGISKDLQLSPRECRNSFINAYRVVKDCTELELVHTTVMDDVPQAMCNFGNRV 953

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLI 893
            L  + + +++Y     D G +++  +C  + HI  L + +   G+ IVVGD+ +S   + 
Sbjct: 954  LIGVGRCLRIY-----DFGKKKMLRKC-ENKHIPNLIVTINAVGNRIVVGDVQESFFFIR 1007

Query: 894  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE----- 946
            Y+  E  +   A D+   W +A  ++D    +G +   N++ +R   N+    DE     
Sbjct: 1008 YRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGNTSDDVDEDPTGV 1067

Query: 947  ----ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 995
                +RG L       EV+   H+GE +   +  +L+   P++       +++ T+ G +
Sbjct: 1068 RSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTALIPGGPEA-------IVYTTIAGGV 1120

Query: 996  GVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            G +      + + F + L+  +R     + G +H  +RS+    K V     +DGDL E 
Sbjct: 1121 GALIPFSSKDDHEFFQHLEMYMRTEHPPICGRDHLSFRSYYFPVKAV-----IDGDLCEQ 1175

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +  L   +  +I+  +     E+ K++E++
Sbjct: 1176 YNSLDANKQKQIADELERLPHEVAKKLEDI 1205


>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
 gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
          Length = 1220

 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 270/1240 (21%), Positives = 518/1240 (41%), Gaps = 190/1240 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFT-SPQELNLIIAKCTRIEIHLL-TPQG-LQPMLDVPIYGRI 62
            Y +T    + +  +  GNF+ +P+   +++ + + +E+  L T  G ++ M    I+G +
Sbjct: 4    YNLTLQGQSAINQAIQGNFSGTPKAQEIVVGRGSALELLTLDTVTGKIKVMCHQDIFGIV 63

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQ 119
             +L  FR     +DF+ + ++  +  +LQ++AE +    L     G    R   P   G 
Sbjct: 64   RSLLAFRLTAGTRDFIAVGSDSGRIVILQYNAEKTCFERLHQETFGKTGCRRIVP---GH 120

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
              + DP  R  +IG      L  ++  D++  L  +  +   +   L    +    G   
Sbjct: 121  FLVGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLEAHKHHTLCYAMVGIDVGFEN 180

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
            PT   L  D +DA +  T E A + +    F E     N+        L++  +LLI VP
Sbjct: 181  PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLNDPGNLLIAVP 240

Query: 224  ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                   GV++  E  +VY   N      IR  I +    +D D  R             
Sbjct: 241  GGNDGPSGVIVCCENYLVY--KNLGDQPDIRCPIPRRRNELD-DADRTMLIIATATHKTK 297

Query: 268  ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
                +L+    G +  + +  +++ V+ +K++       A+ +  L +  +++ + +G+ 
Sbjct: 298  NMYFFLVQAENGDIFKVTLETDEDLVSEMKLKYFDTVPPANALCILKSGFLFVAAEFGNH 357

Query: 324  QLIKLN-----------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            +L ++                         +P    S + + +   +L P+ D  + D+ 
Sbjct: 358  ELYQIASLGEGDDDEFSSAMGFGENDAAFFEPHELKSLIPI-DSMDSLSPLTDAVIGDIA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
            R+   Q+ +  G     SL+++RNG+ I+E A  +L G    +W+++ + +D +D+++VV
Sbjct: 417  REDAAQIYSLVGRGARSSLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T  LA+ + D +EE    GF   T T+ C     + LVQ+ S  +R + +  R  
Sbjct: 477  SFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCAMIGDDSLVQIYSEGIRHIRADKR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQL-EYEISCLDI 537
             NEWK+PP   +     N  QV +A  GG LVY E+  +G L E    +L   +I+C+  
Sbjct: 533  INEWKAPPRRQIVKCAVNRRQVAVALTGGELVYFELDLNGTLNEFTERKLFNADIACMTF 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF-----E 591
            + I E    S+  A+G   D +VRI SL P+  L+          P S+LL        +
Sbjct: 593  SEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQSLPCPPESILLIDTPNEDGK 651

Query: 592  GIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
            G++  +L   L +G L    ++  TG + D +   LGT+P+ L     +  + +   S R
Sbjct: 652  GVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSAILCTSSR 711

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI------GTIDDIQK 703
              ++Y   ++   + ++   + +   F S    + +       L I      G   ++Q 
Sbjct: 712  SWLLYHFQRRFHLTPLSYANLEYAASFCSNQCSEGIVAISASTLRIIAAEKLGVAFNVQS 771

Query: 704  LHIRSIP--LGEHPRRIC-----HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 756
               +  P  +  HP   C         S T    ++K    A + E       + Q  + 
Sbjct: 772  FEHKMTPRRVAVHPSMPCLIVIETDHASYTEVTKNIKRNQMAADVEAMASDETEAQLAQE 831

Query: 757  IST----YPLDTFEYGC------------SILSCSFSDDSNVY--------YCVGTAYVL 792
            I+T      LD   YG             S++S +  D  + +         CV      
Sbjct: 832  IATNLRERRLDERVYGAPRAARGKWASAISLISATSGDKLSYFELPQDENAKCVALVQFS 891

Query: 793  PEENE--------------------------PTKGRILVF-IVEDG-KLQLIAEKETKGA 824
               NE                          PT+G +  F +  +G +   +   ET   
Sbjct: 892  KHPNEAMVLVGCGVNEVLNVHDIDPNDTSIRPTRGCVYTFHLSANGDRFDFLHRTETPLP 951

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVG 883
            V +++ F G  L    + +++Y     D G ++L ++C +    +++  +Q+ G  I+V 
Sbjct: 952  VGAIHDFRGMALVGFGRFLRMY-----DIGQKKLLAKCENKNFPVSIVNIQSTGQRIIVS 1006

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNS 940
            D  +S+  L Y+  +  +   A D    +++ V +LD      A+   NL  VR   + +
Sbjct: 1007 DSQESVHFLRYRKGDNQLVVFADDTTPRYVTCVCVLDYHTVAVADKFGNLAVVRLPERVN 1066

Query: 941  EGATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
            E   D+        +RG       ++E+V  + +G+ +   +  SL   +P    G    
Sbjct: 1067 EDVQDDPTVSKSVWDRGWLNGASQKVELVSNFFIGDTITSLQKTSL---MP----GANEA 1119

Query: 986  VIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 1044
            +++ T+ G IG + S +  ++  F   L+ ++R     + G +H  +RS+    K+V   
Sbjct: 1120 LVYTTIGGAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRDHLAYRSYYAPCKSV--- 1176

Query: 1045 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              +DGD+ E F  +   +  ++++ +  +V E+ K++E++
Sbjct: 1177 --IDGDICEQFSLMDTQKQKDVAEELGKTVSEISKKLEDI 1214


>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1213

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 281/1237 (22%), Positives = 507/1237 (40%), Gaps = 191/1237 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQ--GLQPMLDVPIYGRI 62
            Y +T   P+ +T + VG+F+  ++ ++ +++  +R+E+    P    L  ++   ++G I
Sbjct: 4    YNLTILPPSAITCATVGSFSGTRQQDICVSRGGSRLELLRPDPTTGKLSSVVSTEVFGTI 63

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
              L  FR  G  +D++ +A++  +  VL++D  S+  I            R    GQ   
Sbjct: 64   RALSSFRLTGGTKDYIILASDSGRIVVLEFDPSSNTFIKLHQETYGKSGARRVVPGQYLA 123

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYGCA 173
             DP  R + +   +   L  ++  D+   L      EA   N  +  +  +D+ F     
Sbjct: 124  TDPKGRAVMIAAIEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGF----E 179

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  +A    T             YE+ L     V   WS+   +  A++L+
Sbjct: 180  NPLFAALEVDYGEADQDPTGEAFNLAEKMLTYYELDLGLNHVVR-KWSEPT-EPRANMLL 237

Query: 221  PVP-------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------I 254
             VP             P   GV++  E+ ++Y   NA +    IP R S          I
Sbjct: 238  QVPGGQSTSHPDKFDGP--SGVIVCCEDLLIYKHQNAKEHRVPIPKRDSPFSDPAQGVII 295

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
              A          +L+    G L  + I HE E+V  LKI+      +AS +S L +  +
Sbjct: 296  VAAVMHKMRGAFFFLIQSEEGDLFKVTIDHEDEEVQALKIKYFDTVPVASNLSILKSGFL 355

Query: 315  YIGSSYGDSQLIKLNLQPD-------AKGSYVEV----------------LERYV----- 346
            ++ +  G+  L +     D       +   Y E                 LE  V     
Sbjct: 356  FVAAETGNHALYQFEKLGDDDEETEFSSADYPEFGASGAALPGAFFKPRGLENLVLSDEL 415

Query: 347  -NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 404
             +L PI       L      Q V   G     SLR++R+G+ ++E  + EL G    +W+
Sbjct: 416  ESLAPITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWT 475

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
             R +  D FD ++++ F++ T +LA+   + + E    G  + + T+       N L+Q+
Sbjct: 476  TRLAETDEFDRYIILGFLNATLVLAIG--ETIVEVADTGLLTNSPTIAIQQLDSNGLLQI 533

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 523
                +R +         EWK PPG  + V+T+N  QV++   GG L+Y E+  DG L E 
Sbjct: 534  HPTGIRHIHLDGA--ITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLDGQLNEY 591

Query: 524  K-HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 581
            +   ++   I+ L ++ + +    +   A+G+  +++V+I SL P+  L T        +
Sbjct: 592  QEQKEMGATITSLSLSEVSKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTAV 650

Query: 582  PRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
            P S+ +      S        ++   L +G LL  +L+   G+LTD +   LG++P+ L 
Sbjct: 651  PTSICIAELLDSSIDKNSETLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLL 710

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
                 N T V   S R  + Y+    L +  +    + ++  F++   P+ L       L
Sbjct: 711  RVKVDNKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSL 770

Query: 694  TIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-----AEESEMHFVR 747
             I TI  +  K+   ++PL   PR++     S+       ++++      AE   +H  +
Sbjct: 771  RIFTIPKLGVKVKQDAMPLAYTPRKMLLDPSSKHVITIESEHRTMAPGVKAERLALHKAQ 830

Query: 748  -------LLDDQTF-----------------EFISTYPLDTFEYG-------CSILSCSF 776
                   LLD   F                 + I    L   + G        +I+S +F
Sbjct: 831  GLQVDESLLDQDAFGVPRAEAGKWASCIRISDPIEKTTLVREDLGDNEAATSLAIVSFAF 890

Query: 777  S---DDSNVYYCVGT---AYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 830
            +     +     VG+   A+V P   +    R+  F+ +   ++L+ + E      +L  
Sbjct: 891  AAHHPATEPLLVVGSAKDAFVQPRTCKNGFLRVYRFVNDGKAIELVHKTEVDEMPSALVG 950

Query: 831  FNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 886
            F G+L A + + +++Y    K +LR    +   S       I++L VQ  G  I+VGD  
Sbjct: 951  FQGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSA------IISLSVQ--GSRILVGDSQ 1002

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGAT 944
             S+S  +YK  E  +   A D    W +   ++D D   G +   NL+  R  KN     
Sbjct: 1003 DSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNLWVSRLPKNVSDEV 1062

Query: 945  DE---------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
            DE         E+G       +L+ +  +HL +     +  SLV        G    +++
Sbjct: 1063 DEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQKTSLVP-------GGREVLLY 1115

Query: 989  GTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
              V G IG++   +  E   F + L+ ++R  +  + G +H  +R +         KN +
Sbjct: 1116 TGVQGSIGILVPFISKEDVDFFQTLEMHMRNEMPSLVGRDHLAYRGY-----YFPVKNCV 1170

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL ESF  L   +  +++  ++ SV ++ K++E +
Sbjct: 1171 DGDLCESFALLPSAKQLQVASELDRSVSDVLKKIEAV 1207


>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
          Length = 1203

 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 276/1221 (22%), Positives = 506/1221 (41%), Gaps = 162/1221 (13%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL--TPQGLQPMLDVPIYG 60
            ++ Y +T ++ T + +S  GNF+ P++  ++++K   +E+  L    Q LQ +    ++G
Sbjct: 1    MYLYSLTLNQATAINNSVYGNFSGPKQHEIVVSKGKIMEMLRLDEATQKLQVVYRQEVFG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             I  +  FR  G  +DFL + ++  K  +L++D E ++ +            R    G+ 
Sbjct: 61   LIRKMIPFRLLGMQKDFLVVGSDSGKIVILEYDGEHNKFVKIHQETFGKTGCRRIVPGEY 120

Query: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCAKP 175
               DP  R I +   +    V   +   Q K   +  LE  +   I F       G   P
Sbjct: 121  IAADPKGRAIMIGAVEKQKFVFILNRDSQNKLTISSPLEAHKPHTITFAMVGVDVGIENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D  +A    +  V  + +    F E     N+        +DN A +LI VP 
Sbjct: 181  QFACLEVDYGEADSTYSAVVTGQHQKMLVFYEMDLGLNHVVRKYSTPVDNSAHMLIAVPG 240

Query: 224  PPL--CGVLIIGEETIVYCSANAFK---AIPIRPSITKAYGRVDADGSRY--------LL 270
             P    G+L++ E  I Y   +      +IPIR       G      S Y        LL
Sbjct: 241  EPYGPSGILVVCENMISYKKVDHDDRECSIPIRNEQADKNGTFFTAHSTYTSKDMFFFLL 300

Query: 271  GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-- 328
             +  G +  + +     +V G+ I+    T+    ++ L    ++  S + +  L     
Sbjct: 301  SNEFGDIFKINLNFTNAQVHGMTIQYFDTTTPTVCMNILRPGQLFCASEFSNHTLYTFLD 360

Query: 329  --------------NLQPDAKGSY----------VEVLERYVNLGPIVDFCVVDLERQGQ 364
                          + +P  + +           ++ ++ + NL  I D  V DL  +G 
Sbjct: 361  IGENDPNPIITSSADRKPHGQQTLTTYNPREFLNLQAVDEFPNLASINDMKVEDLTGEGN 420

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLVVSFIS 423
             Q+   SG    G LR++R+G+ I E+A   + Q    + +++  T D FD +++VSF  
Sbjct: 421  PQIYLASGRGAQGCLRVLRHGLTIIEKAVTAMPQKPLNVITVKGKTTDVFDKYMIVSFQQ 480

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR-ELRNE 482
            +T +L++  ++++ E +  GF    +TL       N  +QVT  S+  V    +   R +
Sbjct: 481  QTLVLSIG-QEKVSEVKDSGFVDNERTLHVGILEDNSYIQVTPKSIIHVKGDQQNRKRAK 539

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD--GILTEVKHAQLEYEISCLDINPI 540
            W S  G  V  A +N  QV ++  GG +VY E+ +  G L EV+    + E++C+DI  +
Sbjct: 540  WDSGQGKIVK-ACSNQRQVAVSIEGGQIVYFELDEMSGTLNEVESRFYDSEVACIDIADV 598

Query: 541  GENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS--- 594
             E     +  AVG + D +V+I SL P+  L  I+ + L     P SV L +F+      
Sbjct: 599  PEGRQRCRFLAVG-YADKTVKIMSLDPESCLQRISMQALPAH--PESVALISFQRDEVAQ 655

Query: 595  -----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
                 +L   L +G LL  L++  TG L+D +   LGT  I+L      NT  + A  ++
Sbjct: 656  QQQQLFLHVGLVNGVLLRTLVDNVTGVLSDSRTRFLGTNSISLAKVRQGNTNALVALCNK 715

Query: 650  PTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE-LTIGTIDDI-QKLH 705
            P + Y+  S  K+  + ++ + +     F S   PD   +A  G  L I T++ + +   
Sbjct: 716  PWLCYTHMSTNKVNITPLSYEMLEVASSFCSEKCPDGGIVAISGNTLRIITVERLGENFT 775

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA-----------------------EESE 742
             + +PL   P +I    ++    I    + S +                       +ES 
Sbjct: 776  HKVMPLRYTPTKIQIHRETNYLVILEKDHNSYSYSERLRMKEEIAKNTEDENYLALDESR 835

Query: 743  MHFVRLLDDQ---TFEFISTYPLDTFEY---------GCSILSCSFSDDSNVYYCVGTAY 790
            + + R   ++       +  Y L T E              ++ +  +    +  +GTA 
Sbjct: 836  ISYPRAGQNKFASCIRIVDPYLLQTLELIEFENNEVVFSHFIATTLGNPGETHLILGTAL 895

Query: 791  -VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY- 846
             V  +    + G I  +  V +G+ LQL+     +    + N + G+L+A +   +++Y 
Sbjct: 896  NVTFQPRSCSVGFIKTYKFVNNGQSLQLMHSTPCEDIPMAFNEYKGRLIAGVGPILRIYE 955

Query: 847  ---KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
               K +LR    +  Q+          + +Q     I  GDL +S+ +L YK E+  +  
Sbjct: 956  LGQKKLLRKVENKNFQAPI--------IQIQVDEGRIYAGDLQESVHVLKYKPEDVQLYI 1007

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATD 945
             + D    W+++  +LD D   G +   N+F  R                  K   G  +
Sbjct: 1008 FSDDILNRWLTSFCLLDHDTIAGVDKFENVFINRLPVGCEDDAEDDPTATKFKWENGYLN 1067

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSL-VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PH 1003
                +++ + ++  GE     +  SL  +   +S++     ++FGT +G +G +      
Sbjct: 1068 GAAFKMDPICQFFTGEVGTCIQKCSLNTLSGTNSEI-----ILFGTTSGSLGALLPFETR 1122

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            E+  F   L+  LR   + + G +H  +RS       V  K+ +DGDL E F  L   + 
Sbjct: 1123 EEIDFFVHLEMYLRIEAQPLCGRDHVTFRS-----SYVPVKDVVDGDLCEQFASLEFNKQ 1177

Query: 1064 DEISKTMNVSVEELCKRVEEL 1084
              +++ M+ +  E+ K++E +
Sbjct: 1178 RVLAEEMDRTPPEVMKKLENM 1198


>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1213

 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 285/1238 (23%), Positives = 509/1238 (41%), Gaps = 193/1238 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQ--GLQPMLDVPIYGRI 62
            Y +T   P+ +T + VG+F+  ++ ++ +++  +R+E+    P    L  ++   ++G I
Sbjct: 4    YNLTILPPSAITCATVGSFSGTRQQDICVSRGGSRLELLRPDPTTGKLSSVVSTEVFGTI 63

Query: 63   ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
              L  FR  G  +D++ +A++  +  VL++D  S+  I            R    GQ   
Sbjct: 64   RALSSFRLTGGTKDYIILASDSGRIVVLEFDPSSNTFIKLHQETYGKSGARRVVPGQYLA 123

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYGCA 173
             DP  R + +   +   L  ++  D+   L      EA   N  +  +  +D+ F     
Sbjct: 124  TDPKGRAVMIAAIEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGF----E 179

Query: 174  KPTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  +A    T             YE+ L     V   WS+   +  A++L+
Sbjct: 180  NPLFAALEVDYGEADQDPTGEAFNLAEKMLTYYELDLGLNHVVR-KWSEPT-EPRANMLL 237

Query: 221  PVP-------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS----------I 254
             VP             P   GV++  E+ ++Y   NA +    IP R S          I
Sbjct: 238  QVPGGQSTSHPDKFDGP--SGVIVCCEDLLIYKHQNAKEHRVPIPKRDSPFSDPAQGVII 295

Query: 255  TKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
              A          +L+    G L  + I HE E+V  LKI+      +AS +S L +  +
Sbjct: 296  VAAVMHKMRGAFFFLIQSEEGDLFKVTIDHEDEEVQALKIKYFDTVPVASNLSILKSGFL 355

Query: 315  YIGSSYGDSQLIKLNLQPD-------AKGSYVEV----------------LERYV----- 346
            ++ +  G+  L +     D       +   Y E                 LE  V     
Sbjct: 356  FVAAETGNHALYQFEKLGDDDEETEFSSADYPEFGASGAALPGAFFKPRGLENLVLSDEL 415

Query: 347  -NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 404
             +L PI       L      Q V   G     SLR++R+G+ ++E  + EL G    +W+
Sbjct: 416  ESLAPITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWT 475

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
             R +  D FD ++++ F++ T +LA+   + + E    G  + + T+       N L+Q+
Sbjct: 476  TRLAETDEFDRYIILGFLNATLVLAIG--ETIVEVADTGLLTNSPTIAIQQLDSNGLLQI 533

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 523
                +R +         EWK PPG  + V+T+N  QV++   GG L+Y E+  DG L E 
Sbjct: 534  HPTGIRHIHLDGA--ITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLDGQLNEY 591

Query: 524  K-HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 581
            +   ++   I+ L ++ + +    +   A+G+  +++V+I SL P+  L T        +
Sbjct: 592  QEQKEMGATITSLSLSEVSKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTAV 650

Query: 582  PRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
            P S+ +      S        ++   L +G LL  +L+   G+LTD +   LG++P+ L 
Sbjct: 651  PTSICIAELLDSSIDKNSETLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLL 710

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
                 N T V   S R  + Y+    L +  +    + ++  F++   P+ L       L
Sbjct: 711  RVKVDNKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSL 770

Query: 694  TIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-----AEESEMHFVR 747
             I TI  +  K+   ++PL   PR++     S+       ++++      AE   +H  +
Sbjct: 771  RIFTIPKLGVKVKQDAMPLAYTPRKMLLDPSSKHVITIESEHRTMAPGVKAERLALHKAQ 830

Query: 748  -------LLDDQTF-----------------EFISTYPLDTFEYG-------CSILSCSF 776
                   LLD   F                 + I    L   + G        +I+S +F
Sbjct: 831  GLQVDESLLDQDAFGVPRAEAGKWASCIRISDPIEKTTLVREDLGDNEAATSLAIVSFAF 890

Query: 777  S---DDSNVYYCVGT---AYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLN 829
            +     +     VG+   A+V P   +    R+  F V DGK ++L+ + E      +L 
Sbjct: 891  AAHHPATEPLLVVGSAKDAFVQPRTCKNGFLRVYRF-VNDGKVIELVHKTEVDEMPSALV 949

Query: 830  AFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 885
             F G+L A + + +++Y    K +LR    +   S       I++L VQ  G  I+VGD 
Sbjct: 950  GFQGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSA------IISLSVQ--GSRILVGDS 1001

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGA 943
              S+S  +YK  E  +   A D    W +   ++D D   G +   NL+  R  KN    
Sbjct: 1002 QDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNLWVSRLPKNVSDE 1061

Query: 944  TDE---------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 987
             DE         E+G       +L+ +  +HL +     +  SLV        G    ++
Sbjct: 1062 VDEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQKTSLVP-------GGREVLL 1114

Query: 988  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 1046
            +  V G IG++   +  E   F + L+ ++R  +  + G +H  +R +         KN 
Sbjct: 1115 YTGVQGSIGILVPFISKEDVDFFQTLEMHMRNEMPSLVGRDHLAYRGY-----YFPVKNC 1169

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +DGDL ESF  L   +  +++  ++ SV ++ K++E +
Sbjct: 1170 VDGDLCESFALLPSAKQLQVASELDRSVSDVLKKIEAV 1207


>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
          Length = 1240

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 288/1267 (22%), Positives = 521/1267 (41%), Gaps = 224/1267 (17%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4    YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123  IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123  VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183  ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLV 281
              P   GVLI  E  I Y   N      IR  I +    +D D  R       G++ +  
Sbjct: 243  DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPER-------GMIFVCS 290

Query: 282  ITH----------EKEKVTGLKIELLGETSIASTISY------LDNAVVYIGSSYGD--- 322
             TH          + E+    KI L  +  + +T+         +N  +Y  +  GD   
Sbjct: 291  ATHKTKSMFFFLAQTEQGDIFKITLETDEDMLATVGMNKSFVSAENCYLYQIAHLGDDDE 350

Query: 323  ----SQLIKLN------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCS 371
                S  + L        QP    + V +++   +L PI+ FC + DL  +   Q+    
Sbjct: 351  EPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADLANEDTPQLYVAC 408

Query: 372  GAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAM 430
            G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++
Sbjct: 409  GRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSI 468

Query: 431  NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 490
               + +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   +
Sbjct: 469  G--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKT 524

Query: 491  VNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQ 548
            +     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+
Sbjct: 525  IVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSR 584

Query: 549  IAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---------------- 591
              AVG+  D +VRI SL   + +  + L  + +P +   LC  E                
Sbjct: 585  FLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI 641

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
            G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  
Sbjct: 642  GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW 701

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIP 710
            + YS   +   + ++ + +     F S   P+ +       L I  ++ +  +  + + P
Sbjct: 702  LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP 761

Query: 711  LGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM-- 743
            L   PR+ + H E +            T A  + + Q  AEE             +EM  
Sbjct: 762  LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA 821

Query: 744  -----------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
                                     +R+++      +    L+  E   S+  C FS+  
Sbjct: 822  AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG 881

Query: 781  NVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLL 836
              +Y  VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L
Sbjct: 882  EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL 941

Query: 837  AAINQKIQLY----KWMLR---------------------------------DDGTRELQ 859
              + + +++Y    K +LR                                 D G ++L 
Sbjct: 942  IGVGKLLRVYDLGKKKLLRKCENKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLL 1001

Query: 860  SECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
             +C  + HI A Y   +QT G  ++V D+ +S   + YK  E  +   A D    W++  
Sbjct: 1002 RKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTA 1059

Query: 917  EILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEYH 958
             +LD D   GA+   N+  VR   N+    DE         +RG L       EV+  YH
Sbjct: 1060 SLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYH 1119

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLR 1017
            +GE V   +  +L+        G   ++++ T++G IG++     HE + F + ++ +LR
Sbjct: 1120 VGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLR 1172

Query: 1018 KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 1077
                 + G +H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E+
Sbjct: 1173 SEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEV 1227

Query: 1078 CKRVEEL 1084
             K++E++
Sbjct: 1228 SKKLEDI 1234


>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
            distachyon]
          Length = 1228

 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 280/1252 (22%), Positives = 501/1252 (40%), Gaps = 199/1252 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFT------------SPQELNLIIAKCTRIEIHLLTPQG- 49
            ++ Y +T  + T    + +G+F+            S QE+   +A+   +++    P+  
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDTKKSGAAGSSTQEI--AVARGGTLDLLRPDPETG 58

Query: 50   -LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVS 108
             L+ +L V ++G I +L  FR  G  +D+L + ++  +  +L++  + +           
Sbjct: 59   RLRTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRFDKVHQETFG 118

Query: 109  DRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------- 160
                R    GQ+  +DP  R + +   +    V   +     +   +  LE         
Sbjct: 119  KSGCRRIVPGQLLTVDPKGRALCIAALEKQKLVYVLNRDASARLTISSPLEAHKSHTLTF 178

Query: 161  -LQVLDIKF---LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNN----- 211
             L  LD  F   ++G     I + Y D+      +    A K   F E     N+     
Sbjct: 179  ALTALDCGFDNPVFG----AIELEYGDSDRDPTGQAASHAQKLLTFYELDLGLNHVSRKV 234

Query: 212  ---LDNGADLLIPVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGR-- 260
               +DNGA+LL+ VP       G+L+  +  ++Y +         IP R  +    G   
Sbjct: 235  SEPIDNGANLLVTVPGGGDGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRVDLPAERGVLI 294

Query: 261  VDADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
            V A   R      +LL    G +  + + H  + V+ L+I+      +AS I  L +  +
Sbjct: 295  VAAATHRQKSLFFFLLQTEYGDIFKVDLEHNGDSVSELRIKYFDTIPVASAICVLRSGFL 354

Query: 315  YIGSSYGDSQLIKLN--------------------------LQPDAKGSYVEVLERYVNL 348
            +  S +G+  L +                             QP A  + V + E   +L
Sbjct: 355  FAASEFGNHALYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDE-IESL 413

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRS 407
             PI+D  + +L  +   QV T  G     ++RI+R G+ I+E A   L      +W+++ 
Sbjct: 414  MPIMDMRIANLFDEETPQVYTACGRGSRSTMRILRPGLAISEMARSMLPAEPIAVWTVKK 473

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            + +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV   
Sbjct: 474  NINDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPN 531

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHA 526
             +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+  
Sbjct: 532  GIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQ 589

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
             +  +++CL I P+ E    S+  AVG + D ++RI SL PD  L           P S+
Sbjct: 590  DMSGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDPDDCLQPLSVQSVSSAPESL 648

Query: 586  LLCAFE-------GISY-----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
            L    +       G  Y     L   L +G L    ++M TG+L+D +   LG +P  L 
Sbjct: 649  LFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 708

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
                 +   +   S RP + Y      L + ++   +     F+S    + +       L
Sbjct: 709  PCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDAL 768

Query: 694  TIGTIDDI-QKLHIRSIPLGEHP------------------------------RRICHQ- 721
             I TI+ + +  +  +IPL   P                              +R C + 
Sbjct: 769  RIFTIERLGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKRECLEA 828

Query: 722  ------------------------EQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFI 757
                                    E+S T             E  +  +R+LD ++ +  
Sbjct: 829  SGAVENGNGNGDQMENGDGQEDGAEESNTLPDEQYGYPKAESEKWVSCIRILDPRSRDTT 888

Query: 758  STYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGRILVF-IVEDGK- 812
                L   E   SI + +F D +      VGT   L    +     G I ++  V++GK 
Sbjct: 889  CLLELQDNEAAVSICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGFIHIYKFVDEGKS 948

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 872
            L+L+ + + +    SL  F G+LLA +   ++LY     D G R+L  +C +      + 
Sbjct: 949  LELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLY-----DLGKRKLLRKCENKLFPRTIV 1003

Query: 873  -VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             + T  D I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+   
Sbjct: 1004 SIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFG 1063

Query: 932  NLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            N++  R                  K  +G  +    ++E + ++H+G+ V   +  SL+ 
Sbjct: 1064 NIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLI- 1122

Query: 974  RLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
                   G    +I+GTV G +G ++A    E   F   L+ +LR+    + G +H  +R
Sbjct: 1123 ------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYR 1176

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            S          K+ +DGDL E +  L      +I+  ++ +  E+ K++E++
Sbjct: 1177 S-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEILKKLEDI 1223


>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
 gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
          Length = 1192

 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 291/1222 (23%), Positives = 505/1222 (41%), Gaps = 180/1222 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT VT + +G F+  +E  ++ A  +R+ +    P QG +  +L   I+
Sbjct: 6    NMFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G +  +  FR  G  +D++ +AT+  +  ++++  ++++     +        R    GQ
Sbjct: 66   GIVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  LI     + L  V+  +++ +L  +  +   +  VL +  +    G A 
Sbjct: 126  YLAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  DA    T             YE+ L     V   WS + +D  + LL  
Sbjct: 186  PVFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRK-WS-DTVDRTSSLLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLG 271
            VP     P   GVL+ GEE + Y  +N  AF+  IP R   T+     RV   G  + L 
Sbjct: 244  VPGGNDGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVSGVMHKLK 301

Query: 272  DHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAV 313
              AG    L+ T + +                  +V  LKI+      +A+++  L +  
Sbjct: 302  GSAGAFFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGF 361

Query: 314  VYIGSSYGDSQLIKL---------------NLQPDAKGSYVEV------LERYV------ 346
            ++  S +G+    +                +   D   SY  V      LE  V      
Sbjct: 362  LFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESID 421

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G    +W+ 
Sbjct: 422  SMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTT 481

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            + +  D          I ET          +EE    GF +   TL       + L+QV 
Sbjct: 482  KLTKYD---------HIGET----------VEEVSDSGFLTTAPTLAVQQMGEDGLIQVH 522

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV- 523
               +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG L E  
Sbjct: 523  PKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYD 579

Query: 524  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
            +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P
Sbjct: 580  EKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQALTAAP 638

Query: 583  RSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
             ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  L   S 
Sbjct: 639  SALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTRLFQVSV 698

Query: 638  KNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +       L I
Sbjct: 699  QDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRI 758

Query: 696  GTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEESEMHFV 746
             +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+      
Sbjct: 759  FSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQQSNGDA 818

Query: 747  RLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF-SDDSNV 782
             +L  + F +                IS  P       LD  E   S     F S +   
Sbjct: 819  TVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFASQEGES 878

Query: 783  YYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G+LLA +
Sbjct: 879  FLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQGRLLAGV 938

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
             + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++YK E  
Sbjct: 939  GKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVVYKAEGN 994

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
             +   A D    W +   ++D +   G +   N++ VR     + + +    E   E HL
Sbjct: 995  RLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EPGSEIHL 1050

Query: 960  GEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV-IASLP 1002
                N + HG+              LP S       VG    +++  + G +GV I  + 
Sbjct: 1051 MHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGVFIPFVS 1109

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F  L   +
Sbjct: 1110 REDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFSLLPNDK 1164

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1165 KQMIAGELDRSVREIERKISDI 1186


>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
          Length = 1287

 Score =  206 bits (525), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 273/1249 (21%), Positives = 502/1249 (40%), Gaps = 206/1249 (16%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
            M ++N+++   + T +TH+  G+F   +   +++AK   +E+    P    +  +L   +
Sbjct: 74   MYLYNFIL--QRATGITHAVHGSFAGTKLQEILLAKGKGLELVRPDPNTGKVHTLLQTEV 131

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G + +L  FR  G ++D+  I ++  +  +L+++   ++L             R    G
Sbjct: 132  FGVVRSLMSFRLTGGSKDYAVIGSDSGRIVILEYNPVKNQLEKVHQETFGKSGCRRIVPG 191

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D++ +L  +  +   +   L    +    G  
Sbjct: 192  QYLSIDPKGRAVMIGAIEKQKLVYILNRDSEARLTISSPLEAHKSNTLTYHMVGVDVGFE 251

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    T E A K +    F E     N+        L+   + LI V
Sbjct: 252  NPMFACLEIDYEEADGDPTGEAAAKTQQTLTFYELDLGLNHVVRKYSEPLEEHVNFLISV 311

Query: 223  P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
            P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 312  PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATH 366

Query: 268  -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                   +L+    G +  + +  + + V+ +K++       A+ +  L    +++   +
Sbjct: 367  RTKSMYFFLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVACEF 426

Query: 321  GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
            G+  L ++             +  P  +G       R +          +  PI+   V 
Sbjct: 427  GNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVMVDDIPSYAPILGCQVA 486

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
            DL  +   Q+    G     S+R++R+G+ ++E A  EL G    +W+++   DD FD +
Sbjct: 487  DLANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAY 546

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            ++VSF++ T +L++   D +EE    GF          DA    LVQV    +R + +  
Sbjct: 547  IIVSFVNATLVLSIG--DTVEEVTDSGFL----VPLGDDA----LVQVYPDGIRHIRADK 596

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISC 534
            R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C
Sbjct: 597  R--VNEWKAPGKKTIMKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMC 654

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-- 591
            + +  +      S   AVG+  D +VRI SL   + ++   +  + +P +   LC  E  
Sbjct: 655  MALGSVPSGEQRSWFLAVGL-ADNTVRIISLDPSDCLSPRSM--QALPSAAESLCIVEMG 711

Query: 592  --------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
                                G  YL   L +G LL  +L+  +G+L D +   LG++P+ 
Sbjct: 712  TVETAANDDDDDDDAPLKTSGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVK 771

Query: 632  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
            L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +      
Sbjct: 772  LFRIQMQGSEAVLAMSSRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTN 831

Query: 692  ELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLD 750
             L I  ++ +  +  + S PL   P+R     ++    I    + +  EE++    R + 
Sbjct: 832  TLRILALEKLGAVFNQISFPLEYTPKRFAIHAETGKLIISETDHNAYTEETKTVRKRQMA 891

Query: 751  DQTFE----------------FIS-TYPLDTF---------------------------- 765
            D+  E                FI+   P D F                            
Sbjct: 892  DEMREAAGDDEQELANEMADAFINEVLPEDVFSAPKAGTGMWASQIRVMDPINGHTYSKV 951

Query: 766  -----EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIA 817
                 E   S+    F+ D   Y   G A  L    +   G  + V+ V++   +L+ + 
Sbjct: 952  QLAQNEAVLSLALVRFAVDQKWYVVAGVAKDLQINPKIGNGGFIDVYRVDNQTNELEHVH 1011

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQT 875
              E   A  +L AF G+LLA I + +++Y     D G ++L  +C  + HI    + +Q 
Sbjct: 1012 RTEIDDAPGALCAFQGRLLAGIGKVLRMY-----DLGKKKLLRKC-ENKHIPNQIVNIQG 1065

Query: 876  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 935
             G  + V D+ +S+  L YK  E  +   A D +  W+++  +LD D  +   + F    
Sbjct: 1066 MGQRVYVSDVQESVYCLKYKRPENQLIIFADDTHPRWVTSATLLDYDT-VATGDKFGNIA 1124

Query: 936  VRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
            V +     +D+            +RG L       E +  +HLGE V   +  +L+    
Sbjct: 1125 VLRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKATLI---- 1180

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G   ++I+ T++G +G +      E Y F + L+ ++R     + G +H  +RS+ 
Sbjct: 1181 ---PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSY- 1236

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN +DGDL E F  L   +   I+  +  +  E+ K++E++
Sbjct: 1237 ----YYPVKNVMDGDLCEQFTSLDPAKQKSIASDLGRTPSEVAKKLEDI 1281


>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
          Length = 1216

 Score =  206 bits (525), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 282/1227 (22%), Positives = 495/1227 (40%), Gaps = 172/1227 (14%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIYGRIATL 65
            +T    T+VT + VG+F+   +  L +   TR+EI  L P    L  +     +G +  +
Sbjct: 6    LTLQPATSVTAAAVGSFSGKGQEILAVRGSTRLEILKLNPSTGQLDSICSSEAFGTVRNV 65

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIID 124
              FR  G  +D++ ++++  +  +++     +        +V  + G R T  GQ   +D
Sbjct: 66   AAFRLAGMGKDYIVLSSDSGRLSIIELVISPTPHFESLYQEVYGKSGSRRTIPGQFLAVD 125

Query: 125  PDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY---GCAKPTIVV 179
            P  R  + G      L  ++  + +G++  +  +   +   L +  +    G   P    
Sbjct: 126  PKGRSAMFGAVEKQKLCYILNRNTEGKVYPSSPLEAHKNHTLVVNMIACDTGYDNPMFAA 185

Query: 180  LYQDNKDARHVKT---YEVALKDKDFVE---------GPWSQNNLDNGADLLIPVP---- 223
            L  D  D+ H  T   Y  A K   F E           WS+   D  A+LL+ VP    
Sbjct: 186  LELDYGDSDHDATGEAYRAAEKHLTFYELDLGLNHVVRKWSEPT-DRRANLLVQVPGGQN 244

Query: 224  --------PPLCGVLIIGEETIVY--CSANAFKA-IPIRPSITKAYGRVDA--------- 263
                    P   GVL+  E+ +++    A A +  IP R +     G+            
Sbjct: 245  ANTDRFDGP--GGVLVCTEDYVIWKHMDAEAHRVPIPRRRNPMAKPGQSSRGIIIVAAVT 302

Query: 264  ---DGS-RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                GS  +LL    G L    I HE E V  L+I+      +A+++  L +  +++ S 
Sbjct: 303  HKIKGSFFFLLQSEDGDLFKATIEHEGEDVRALRIKYFDTVPVATSLCILKSGYLFVASE 362

Query: 320  YGDSQLIKLNLQPDAKGSYVEVLERYVNLG-----------------------------P 350
            +GD  L +     D  G        Y   G                             P
Sbjct: 363  FGDQGLYQFQSLADDDGEREWSSTDYPGFGLGEEHLPYAFFQPRPLQNLLLADTLSSLDP 422

Query: 351  IVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
            I+D  VV+L        Q+    G     + R +++G+ IN      L G+   +W+L+ 
Sbjct: 423  ILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDINVLVESPLPGVPNAVWTLKL 482

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            S DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+QV   
Sbjct: 483  SEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVHPA 540

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHA 526
             +R + +  R   +EW +P G ++  AT N +QV++A     LVY E+  +G L E +  
Sbjct: 541  GLRHIRAADRV--DEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNEYQER 598

Query: 527  Q-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            + L    +C+ I  + E    +   AVG   + +V I SL PD  L T         P  
Sbjct: 599  KSLPGNATCVSIADVPEGRRRTPYLAVGC-DNQTVHIISLEPDNTLETLSLQALTAPPSD 657

Query: 585  VLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            + L      S        +L   L +G LL  +++   G L+D +   LG++P  +   +
Sbjct: 658  ICLAEIFDTSIDKNRATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRIVRSA 717

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
               +  V A S R  ++Y+    L    +    + + C  ++A  PD L       L I 
Sbjct: 718  VHGSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNTLRIF 777

Query: 697  TIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-------AICSLKNQSCAEESEMH---- 744
            TI  +  KL   S+PL   PR+      +  F        + S +    A E +      
Sbjct: 778  TIPRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGIEADHRVWSAQAMEKATEEKKREGDE 837

Query: 745  -------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD- 778
                                      +R++D      + T  LD  E   S+  C F   
Sbjct: 838  KALAVLELPPAEFGRVRAPAGHWGSLIRVIDPLQNTTLQTLELDEDEAAFSLAVCYFERM 897

Query: 779  DSNVYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
                   VGT     ++P+  +    R+     E  +L+ + + +T     ++ AF G L
Sbjct: 898  GGEPSLVVGTGVKTTLMPKGCKEGWLRVYAIRDEGKRLEFMHKTKTDDVPLAVAAFQGYL 957

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 894
            LA + + ++LY+      G + L  +C ++G    +  +   G  I+VGDL +S    +Y
Sbjct: 958  LAGVGKSLRLYEM-----GKKALLRKCENNGFPTGVATINVVGARIIVGDLQESTFYCVY 1012

Query: 895  KHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE 946
            +    +I  R     A D    +++AV  +D D    A+   N+F  R   + SE   D+
Sbjct: 1013 R----SIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFVNRLEERVSEKVDDD 1068

Query: 947  ERGRL------EVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVI 998
              G +       ++G  +  + +  +  GS+V  L    V  G    V++ T++G +G +
Sbjct: 1069 PTGAVILHEKGFLMGSANKTDLIAHYNVGSVVTSLTKVSVAPGGRDVVVYTTISGAVGAL 1128

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
               + ++   F+  L+ ++R +   + G +H  +R +    K V     +DGDL ESF  
Sbjct: 1129 VPFISNDDVEFMTTLEMHIRSLNTSLVGRDHLAYRGYYAPVKAV-----VDGDLCESFNM 1183

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L   +   I+  ++ +V E+ K++E+L
Sbjct: 1184 LPYPQQQAIAADLDRNVGEVLKKLEQL 1210


>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
          Length = 1192

 Score =  206 bits (525), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 291/1222 (23%), Positives = 505/1222 (41%), Gaps = 180/1222 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            +++ Y +T   PT VT + +G F+  +E  ++ A  +R+ +    P QG +  +L   I+
Sbjct: 6    NMFLYSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
            G +  +  FR  G  +D++ +AT+  +  ++++  ++++     +        R    GQ
Sbjct: 66   GIVRAIASFRLAGSHKDYIILATDSGRITIIEYLPKTNKFQRIHLETFGKSGVRRVIPGQ 125

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
                DP  R  LI     + L  V+  +++ +L  +  +   +  VL +  +    G A 
Sbjct: 126  YLAADPKGRACLISALEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLSLVALDVGYAN 185

Query: 175  PTIVVLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIP 221
            P    L  D  DA    T             YE+ L     V   WS + +D  + LL  
Sbjct: 186  PVFAALELDYTDADQDPTGQAREEVETQLVYYELDLGLNHVVRK-WS-DTVDRTSSLLFQ 243

Query: 222  VP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLG 271
            VP     P   GVL+ GEE + Y  +N  AF+  IP R   T+     RV   G  + L 
Sbjct: 244  VPGGNDGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRSGATEDPQRKRVIVAGVMHKLK 301

Query: 272  DHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAV 313
              AG    L+ T + +                  +V  LKI+      +A+++  L +  
Sbjct: 302  GSAGAFFFLLQTDDGDLFKVTIDMIEDSDGNPTGEVKRLKIKYFDTIPVATSLCILKSGF 361

Query: 314  VYIGSSYGDSQLIKL---------------NLQPDAKGSYVEV------LERYV------ 346
            ++  S +G+    +                +   D   SY  V      LE  V      
Sbjct: 362  LFAASEFGNHHFYQFEKLGDDDEELEFSSDDFPTDPTASYNPVYFHPRPLENLVLVESID 421

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
            ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G    +W+ 
Sbjct: 422  SMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTPSAVWTT 481

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            + +  D          I ET          +EE    GF +   TL       + L+QV 
Sbjct: 482  KLTKYD---------HIGET----------VEEVSDSGFLTTAPTLAVQQMGEDGLIQVH 522

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV- 523
               +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG L E  
Sbjct: 523  PKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDGSLAEYD 579

Query: 524  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 582
            +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P
Sbjct: 580  EKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQALTAAP 638

Query: 583  RSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
             ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  L   S 
Sbjct: 639  SALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSV 698

Query: 638  KNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +       L I
Sbjct: 699  QDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIHANYLRI 758

Query: 696  GTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEESEMHFV 746
             +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+      
Sbjct: 759  FSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQQSNGDA 818

Query: 747  RLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF-SDDSNV 782
             +L  + F +                IS  P       LD  E   S     F S +   
Sbjct: 819  TVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFASQEGES 878

Query: 783  YYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAI 839
            +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G+LLA +
Sbjct: 879  FLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQGRLLAGV 938

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899
             + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++YK E  
Sbjct: 939  GKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVVYKAEGN 994

Query: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
             +   A D    W +   ++D +   G +   N++ VR     + + +    E   E HL
Sbjct: 995  RLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EPGSEIHL 1050

Query: 960  GEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV-IASLP 1002
                N + HG+              LP S       VG    +++  + G +GV I  + 
Sbjct: 1051 MHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGVFIPFVS 1109

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F  L   +
Sbjct: 1110 REDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFSLLPNDK 1164

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1165 KQMIAGELDRSVREIERKISDI 1186


>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
 gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
          Length = 1215

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 261/1239 (21%), Positives = 498/1239 (40%), Gaps = 185/1239 (14%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
            M ++N+++   + T +TH+  G F   ++  ++++K   +E+    P    +  +L   +
Sbjct: 1    MYLYNFIL--QRATGITHAVHGCFAGTKQQEILLSKGKSLELVRPDPNTGKVHTLLQTEV 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G I +L  FR  G  +D+  + ++  +  +L+++   ++L             R    G
Sbjct: 59   FGVIRSLMSFRLTGGTKDYAVVGSDSGRIVILEYNPAKNQLEKVHQETFGKSGCRRIVPG 118

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   IDP  R  +IG      L  ++  D++ +L  +  +   +   L    +    G  
Sbjct: 119  QFLAIDPKGRAVMIGAIEKQKLVYILNRDSEARLTISSPLEAHKSSTLTYHMVGVDVGFE 178

Query: 174  KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
             P    L  D ++A    + E A K +    F E     N+        L+  A+ LI V
Sbjct: 179  NPMFACLEIDYEEADLDPSGEAAAKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISV 238

Query: 223  P---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
            P       GVLI  E  + Y   N      IR  I +    +D D  R            
Sbjct: 239  PGGNDGPSGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATHRT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L+    G +  + +  + + V+ +K++       A+ +  L    +++   +G+
Sbjct: 296  KSMYFFLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVACEFGN 355

Query: 323  SQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDL 359
              L ++             +  P  +G       R +          +  PI+   V DL
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVMVDEIHSYAPILGCQVADL 415

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
              +   Q+    G     S+R++R+G+ ++E A  EL G    +W+++   D+ FD +++
Sbjct: 416  ANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDEEFDAYII 475

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            VSF++ T +L++   D +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476  VSFVNATLVLSIG--DTVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADKR- 532

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533  -VNEWKAPGKKTITKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMA 591

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE---- 591
            +  +      S   AVG+  D +VR+ SL   + ++   +  + +P +   LC  E    
Sbjct: 592  LGSVPAGEQRSWFLAVGL-ADNTVRVISLDPSDCLSPRSM--QALPSAAESLCIVEMGTG 648

Query: 592  -----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +
Sbjct: 649  DTNEEGVASSAGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGS 708

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S R  + Y    +   + ++ + + +   F+S    + +       L I  ++ 
Sbjct: 709  EAVLAMSSRTWLSYYFQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEK 768

Query: 701  IQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE---- 755
            +  +  + + PL   P+R     ++    I    + +  EE++    + + D+  E    
Sbjct: 769  LGAVFNQITFPLEYTPKRFLIHNETGKLVISETDHNAYTEETKNIRKKQMADEMREAAGE 828

Query: 756  ------------FIS-TYPLDTF---------------------------------EYGC 769
                        FI+   P D F                                 E   
Sbjct: 829  DEQELANEMADAFINEVLPEDVFSAPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEAVL 888

Query: 770  SILSCSFSDDSNVYYCVGTAYVLPEENEPTKG---RILVFIVEDGKLQLIAEKETKGAVY 826
            S+    F+ D   Y   G A  L    +   G    +  + V   +L+     E   A  
Sbjct: 889  SMALVRFAVDQKWYVVAGVAKDLQMNPKIANGGFIDVYKYDVHTHQLEHYHRTEIDDAPG 948

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGD 884
            ++  F G++L  + + +++Y     D G ++L  +C  + HI    + +Q  G  + V D
Sbjct: 949  AIAGFQGRVLVGVGRVLRIY-----DLGKKKLLRKC-ENKHIPNQIVNIQAMGSRVFVSD 1002

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEG 942
            + +SI  + YK  E  +   A D +  W++   +LD D    A+   N+  +R   +   
Sbjct: 1003 VQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNIAILRLPHSVSD 1062

Query: 943  ATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
              DE         +RG L       E +  +HLGE +   +  +L+        G   ++
Sbjct: 1063 DVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMSLQKATLI-------PGGSESL 1115

Query: 987  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            I+ T++G +G +      E Y F + L+ ++R     + G +H  +RS+         K+
Sbjct: 1116 IYATMSGTVGALVPFTSREDYDFFQHLEMHMRNENTPLCGRDHLSYRSY-----YYPVKH 1170

Query: 1046 FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +DGDL E F  +   +   I+  +  +  E+ K++E++
Sbjct: 1171 VMDGDLCEQFTSMDPAKQKSIASDLGRTPNEVAKKLEDI 1209


>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
            occidentalis]
          Length = 1223

 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 264/1242 (21%), Positives = 506/1242 (40%), Gaps = 191/1242 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T    T +T SC GNF+  ++  + +AK   +EI  L P      +  +    ++G 
Sbjct: 4    YNLTLQHATAITASCHGNFSGHKQQEIAVAKGKILEI--LKPDSNTGKVHTVYATDVFGV 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I +L  FR  G ++D+L + ++  + C+L+++   + L    M        R    GQ  
Sbjct: 62   IRSLMSFRLTGGSKDYLIVGSDSGRICILEFNPAKNVLEKIHMETFGKSGCRRIVPGQYL 121

Query: 122  IIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPT 176
             +DP  R  +IG      L  ++  D+  +L  +  +   +   L    +    G   P 
Sbjct: 122  AVDPKGRAVMIGAVEKQKLVYILNRDSNARLTISSPLEAHKSNTLVYHMVGVDVGFENPV 181

Query: 177  IVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVPPP 225
               +  D ++A +  T E A K +    F E     N+        L+  ++ LI VP  
Sbjct: 182  FACIELDYEEADNDHTGEAAKKAQQSLTFYELDLGLNHVVRKYSEPLEEPSNFLIAVPGG 241

Query: 226  L---CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------------- 267
            +    GVL+  E  I Y   N      IR  I +    +D D  R               
Sbjct: 242  VDGPSGVLVCSENFITY--KNLGDQADIRCPIPRRRNDLD-DPDRGMLFVCSTQHKTKSM 298

Query: 268  --YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
              +L     G +  + +  + + VT +K++      +A T+  L +  +++ S +G+  L
Sbjct: 299  FFFLAQTEQGDIFKITLEFDDDAVTEIKLKYFDSLPVAQTMHVLKSGFLFVASEFGNHSL 358

Query: 326  IKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDLERQ 362
             ++             ++ P  +G     L R +          +L PI+   V DL  +
Sbjct: 359  YQIAHLGDNTDEPEFSSIFPLEEGDTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTNE 418

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
               Q+    G     ++R++R+G+ ++E A  EL G    +W+++   DD +D ++VVSF
Sbjct: 419  DTPQLYAACGRGPRSTMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVSF 478

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            I+ T +L++   + +EE    GF   T TL CH   ++ LVQ+    +R + +  R   N
Sbjct: 479  INATLVLSIG--ETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRR--VN 534

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTE-VKHAQLEYEISCLDINP 539
            EW++     +     N  QV++A  GG L+Y E+   G L E  +  ++  ++ C+ +  
Sbjct: 535  EWRTSGKKLIVKCAVNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGS 594

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG--EIIPRSVLL-----CAFEG 592
            +      ++  AVG  +D +V + SL   + ++   + G  E  P S+ +     C    
Sbjct: 595  VPAGEQRTKFLAVGS-SDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVELKACFLPS 653

Query: 593  IS---------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
            IS               YL   L +G L   +L+  TG+++D +   LG++ + L     
Sbjct: 654  ISVDMSGHEEGSGSSALYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKM 713

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
            + T  V A S R  + Y    +   + ++   + +   F S   P+ +       L I  
Sbjct: 714  QGTDAVLAMSSRCWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILA 773

Query: 698  IDDIQKLHIR-SIPLGEHPRRICHQEQSR------------TFAICSLKNQSCAEE---- 740
            ++ +  +  + S PL   PR     ++S+            T ++   + Q  AEE    
Sbjct: 774  LEKLGAVFNQLSAPLSFTPRSFVIDKKSQKLIVIETDHNAYTDSVKEKRKQHVAEEMIEA 833

Query: 741  ---------------------SEMHF-------------VRLLDDQTFEFISTYPLDTFE 766
                                  E  F             +R+L+      +    L+  E
Sbjct: 834  AGEAEQEMAAELAAAFLSEDLPESQFGAPRAGKKHWASVIRILNPSDLSTVYKIQLEQNE 893

Query: 767  YGCSILSCSFSDDSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKG 823
               S+   +F   ++    VG +  L   P E   +       + +  +L+L+       
Sbjct: 894  AAVSVALVNFDKSTDPILLVGISKDLQLSPRECRNSFINAYRVVKDCTELELVHTTVMDD 953

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIV 881
               ++  F  ++L  + + +++Y     D G +++  +C  + HI  L + +   G+ IV
Sbjct: 954  VPQAMCNFGNRVLIGVGRCLRIY-----DFGKKKMLRKC-ENKHIPNLIVTINAVGNRIV 1007

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            VGD+ +S   + Y+  E  +   A D+   W +A  ++D    +G +   N++ +R   N
Sbjct: 1008 VGDVQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGN 1067

Query: 940  SEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            +    DE         +RG L       EV+   H+GE +   +  +L+   P++     
Sbjct: 1068 TSDDVDEDPTGVRSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTALIPGGPEA----- 1122

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
              +++ T+ G +G +      + + F + L+  +R     + G +H  +RS+    K V 
Sbjct: 1123 --IVYTTIAGGVGALIPFSSKDDHEFFQHLEMYMRTEHPPICGRDHLSFRSYYFPVKAV- 1179

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                +DGDL E +  L   +  +I+  +     E+ K++E++
Sbjct: 1180 ----IDGDLCEQYNSLDANKQKQIADELERLPHEVAKKLEDI 1217


>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
          Length = 1216

 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 281/1227 (22%), Positives = 495/1227 (40%), Gaps = 172/1227 (14%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIYGRIATL 65
            +T    T+VT + VG+F+   +  L +   TR+EI  L P    L  +     +G +  +
Sbjct: 6    LTLQPATSVTAAAVGSFSGKGQEILAVRGSTRLEILKLNPSTGQLDSICSSEAFGTVRNV 65

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIID 124
              FR  G  +D++ ++++  +  +++     +        +V  + G R T  GQ   +D
Sbjct: 66   AAFRLAGMGKDYIVLSSDSGRLSIIELVISPTPHFESLYQEVYGKSGSRRTIPGQFLAVD 125

Query: 125  PDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY---GCAKPTIVV 179
            P  R  + G      L  ++  + +G++  +  +   +   L +  +    G   P    
Sbjct: 126  PKGRSAMFGAVEKQKLCYILNRNTEGKVYPSSPLEAHKNHTLVVNMIACDTGYDNPMFAA 185

Query: 180  LYQDNKDARHVKT---YEVALKDKDFVE---------GPWSQNNLDNGADLLIPVP---- 223
            L  D  D+ H  T   Y  A K   F E           WS+   D  A+LL+ VP    
Sbjct: 186  LELDYGDSDHDATGEAYRAAEKHLTFYELDLGLNHVVRKWSEPT-DRRANLLVQVPGGQN 244

Query: 224  --------PPLCGVLIIGEETIVY--CSANAFKA-IPIRPSITKAYGRVDA--------- 263
                    P   GVL+  E+ +++    A A +  IP R +     G+            
Sbjct: 245  ANTDRFDGP--GGVLVCTEDYVIWKHMDAEAHRVPIPRRRNPMAKPGQSSRGIIIVAAVT 302

Query: 264  ---DGS-RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                GS  +LL    G L    I HE E V  L+I+      +A+++  L +  +++ S 
Sbjct: 303  HKIKGSFFFLLQSEDGDLFKATIEHEGEDVRALRIKYFDTVPVATSLCILKSGYLFVASE 362

Query: 320  YGDSQLIKLNLQPDAKGSYVEVLERYVNLG-----------------------------P 350
            +GD  L +     D  G        Y   G                             P
Sbjct: 363  FGDQGLYQFQSLADDDGEREWSSTDYPGFGLGEEHLPYAFFQPRPLQNLLLADTLSSLDP 422

Query: 351  IVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
            I+D  VV+L        Q+    G     + R +++G+ +N      L G+   +W+L+ 
Sbjct: 423  ILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDVNVLVESPLPGVPNAVWTLKL 482

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG 467
            S DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+QV   
Sbjct: 483  SEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVHPA 540

Query: 468  SVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHA 526
             +R + +  R   +EW +P G ++  AT N +QV++A     LVY E+  +G L E +  
Sbjct: 541  GLRHIRAADRV--DEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNEYQER 598

Query: 527  Q-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 584
            + L    +C+ I  + E    +   AVG   + +V I SL PD  L T         P  
Sbjct: 599  KSLPGNATCVSIADVPEGRRRTPYLAVGC-DNQTVHIISLEPDNTLETLSLQALTAPPSD 657

Query: 585  VLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            + L      S        +L   L +G LL  +++   G L+D +   LG++P  +   +
Sbjct: 658  ICLAEIFDTSIDKNRATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRIVRSA 717

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
               +  V A S R  ++Y+    L    +    + + C  ++A  PD L       L I 
Sbjct: 718  VHGSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNTLRIF 777

Query: 697  TIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-------AICSLKNQSCAEESEMH---- 744
            TI  +  KL   S+PL   PR+      +  F        + S +    A E +      
Sbjct: 778  TIPRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGIEADHRVWSAQAMEKATEEKKREGDE 837

Query: 745  -------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD- 778
                                      +R++D      + T  LD  E   S+  C F   
Sbjct: 838  KALAVLELPPAEFGRVRAPAGHWGSLIRVIDPLQNTTLQTLELDEDEAAFSLAVCYFERM 897

Query: 779  DSNVYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
                   VGT     ++P+  +    R+     E  +L+ + + +T     ++ AF G L
Sbjct: 898  GGEPSLVVGTGVKTTLMPKGCKEGWLRVYAIRDEGKRLEFMHKTKTDDVPLAVAAFQGYL 957

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 894
            LA + + ++LY+      G + L  +C ++G    +  +   G  I+VGDL +S    +Y
Sbjct: 958  LAGVGKSLRLYEM-----GKKALLRKCENNGFPTGVATINVVGARIIVGDLQESTFYCVY 1012

Query: 895  KHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE 946
            +    +I  R     A D    +++AV  +D D    A+   N+F  R   + SE   D+
Sbjct: 1013 R----SIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFVNRLEERVSEKVDDD 1068

Query: 947  ERGRL------EVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVI 998
              G +       ++G  +  + +  +  GS+V  L    V  G    V++ T++G +G +
Sbjct: 1069 PTGAVILHEKGFLMGSANKTDLIAHYNVGSVVTSLTKVSVAPGGRDVVVYTTISGAVGAL 1128

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
               + ++   F+  L+ ++R +   + G +H  +R +    K V     +DGDL ESF  
Sbjct: 1129 VPFISNDDVEFMTTLEMHIRSLNTSLVGRDHLAYRGYYAPVKAV-----VDGDLCESFNM 1183

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L   +   I+  ++ +V E+ K++E+L
Sbjct: 1184 LPYPQQQAIAADLDRNVGEVLKKLEQL 1210


>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
            [Rhipicephalus pulchellus]
          Length = 1259

 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 271/1232 (21%), Positives = 506/1232 (41%), Gaps = 198/1232 (16%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
            M ++N+  T  + T +TH+  GNF+  +   + +++   +E+    P    +  +    +
Sbjct: 1    MYLYNF--TLQRATGITHAVHGNFSGTKLQEVAVSRGKILELLRPDPNTGKVYTLYACEV 58

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDN 117
            +G I ++  FR  G ++D+L + ++  +  +L+++ + S    +   +   + G R    
Sbjct: 59   FGIIRSMMSFRLTGGSKDYLVVGSDSGRIVILEYNPQKS-CFEKVHQETFGKSGCRRIVP 117

Query: 118  GQIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCA-- 173
            GQ   +DP  R + +   +   L  ++  D   +L  +  +   +   L    +Y C   
Sbjct: 118  GQHLAMDPKGRALMVAAVEKQKLVYILNRDAAARLTISSPLEAHKSSTL----VYHCVGV 173

Query: 174  -----KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGAD 217
                  P    L  D ++A    + E A        F E     N+        L+   +
Sbjct: 174  DVGFENPVFACLEMDYEEADSDPSGEAANNTHQTLTFYELDLGLNHVVRKYSEPLEEHGN 233

Query: 218  LLIPVP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----- 267
             LI VP     P   GVLI  E  I Y   N      IR  I +    +D D  R     
Sbjct: 234  FLIAVPGGSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFV 288

Query: 268  ------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
                        +L     G +  + +  +++ VT +K++      +A+++  L    ++
Sbjct: 289  CSANHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTIPVAASMCVLKTGFLF 348

Query: 316  IGSSYGDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPI 351
            + + +G+  L ++                           P A  + + V E   +L P 
Sbjct: 349  VAAEFGNHCLYQIARLGEEDEEPEFSSAIPLEEGDTFFFAPRALRNLLPV-EELDSLSPA 407

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTD 410
            +   + DL  +   Q+    G      +R++R+G+ ++E A  EL G    +W+++   D
Sbjct: 408  MGCTIADLANEDTPQLYVACGRGPRSCIRVLRHGLEVSEMAVSELPGNPNAVWTVKRKAD 467

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            + +D +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R
Sbjct: 468  EDYDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCAQIGDDALVQVYPEGIR 525

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQL 528
             + +  R   NEW++P   ++     N  QV++A  GG LVY E+   G L E     ++
Sbjct: 526  HIRADKR--VNEWRTPGKKAIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTDRREM 583

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLL 587
              +I C+ +  +      S+  AVG+  D +VRI SL   + ++   +      P S+ +
Sbjct: 584  SADIICMSLASVPTGEQRSRFLAVGL-ADNTVRIISLDPSDCLSPLSMQALPATPESLSI 642

Query: 588  CAF---------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
                        +GI YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 643  VEMGMTEVETTGQGILYLNIGLQNGVLLRTVLDQVTGDLSDTRTRYLGSRPVKLFKVRMQ 702

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
             +    A S R  + Y    +   + ++ + +     F+S   P+ +       L I  +
Sbjct: 703  GSDAALAMSSRSWLSYYYQNRFHLTPLSYETLEFASGFSSEQCPEGIVAISTNTLRILAL 762

Query: 699  DDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSL------------KNQSCAEE----- 740
            + +  +  + S  L   PR+      S    I               + Q  AEE     
Sbjct: 763  EKLGAVFNQVSTTLEYTPRKFVVNSDSGHLIIVETDHNAYTEKMKQQRKQQMAEEMVEAA 822

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           +R+L+    + +    L+  E 
Sbjct: 823  GEGEQELAAEMAAAFLSEVLPETVFGSPKAGSGMWASVIRVLNPADSQTLCKVALEQNEA 882

Query: 768  GCSILSCSF-SDDSNVYYCVGTAYVLPEE--NEPTKGRILVFIVE---DGKLQLIAEKET 821
              S+    F S     Y  VG A  L  +  +  + G +L + +    + +L+L+     
Sbjct: 883  ALSVALVKFASQPDEQYVVVGAARELSLQPWHARSGGLLLTYRLSHAGETRLELVHATSV 942

Query: 822  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFI 880
            + A  +L  F G+LLA + + ++LY     D G ++L  +C +     A+  +Q+ G+ +
Sbjct: 943  EEAPTALCPFQGRLLAGVGKCLRLY-----DLGRKKLLRKCENKYIPSAIVSIQSMGNRV 997

Query: 881  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KN 939
            VVGD+ +S   L YK +E  +   A D    W++A  +LD D   GA+   N+  +R  N
Sbjct: 998  VVGDVQESFFFLRYKRQENQLVIFADDAVPRWITASCMLDYDTVAGADKFGNVSIIRLPN 1057

Query: 940  SEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
            S   +DE            +RG L       EV+  +H+GE V   +  +L+        
Sbjct: 1058 S--VSDEVDEDPTGIKSLWDRGWLGGSSQKAEVISNFHIGETVLSLQKATLI-------P 1108

Query: 981  GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
            G   ++++ T++G IGV+     HE + F + L+ ++R     + G +H  +RS      
Sbjct: 1109 GGSESLVYVTLSGTIGVLVPFTAHEDHDFFQHLEMHMRSENPPLCGRDHLSFRS-----S 1163

Query: 1040 TVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
                KN +DGDL E F  L  ++   I++ ++
Sbjct: 1164 YFPVKNVIDGDLCEQFNSLDPSKQKSIAEELD 1195


>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
          Length = 1229

 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 271/1249 (21%), Positives = 499/1249 (39%), Gaps = 192/1249 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFT-------------SPQELNLIIAKCTRIEIHLLTPQG 49
            ++ Y +T  + T    + +G+F+             S QE+   +A+ + +++    P+ 
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSGSTQEI--AVARGSTLDLLRPDPET 58

Query: 50   --LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV 107
              L+ +L V ++G I +L  FR  G  +D+L + ++  +  +L++  + + L        
Sbjct: 59   GRLRTLLSVDVFGAIRSLAQFRLTGANKDYLVVGSDSGRLVILEYSPDRNRLDKVHQETF 118

Query: 108  SDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIK 167
                 R    GQ+  +DP  R + +   +    V   +     +   +  LE  +   + 
Sbjct: 119  GKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNTLT 178

Query: 168  FLY-----GCAKPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN-------- 211
            F       G   P    +  +  ++    T + A + +    F E     N+        
Sbjct: 179  FALAALDCGFDNPVFAAIELEYAESDRDPTGQAANQAQKLLTFYELDLGLNHVSRKVSEP 238

Query: 212  LDNGADLLIPVP---PPLCGVLIIGEETIVYCSANAFK---AIPIRPSITKAYGRVDADG 265
            +DNGA+LL+ VP       GVL+  +  ++Y +    +    IP R  +    G +    
Sbjct: 239  IDNGANLLVTVPGGGDGPSGVLVCCDNFVLYRNQGHPEIRAVIPRRADLPAERGVLIVAA 298

Query: 266  SR--------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIG 317
            +         +LL    G +  + + H  + V+ L+I+      + S +  L +  ++  
Sbjct: 299  ATHKQKSMFFFLLQTEYGDIFKVDLDHNGDAVSELRIKYFDTIPVTSAVCVLRSGFLFAA 358

Query: 318  SSYGDSQLIKLN--------------------------LQPDAKGSYVEVLERYVNLGPI 351
            S +G+  L +                             QP A  + + + E   +L P+
Sbjct: 359  SEFGNHALYQFRDIGREADVESSSATLMETEEGFQPVFFQPRALKNLMRIDE-IESLMPV 417

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTD 410
            +D  V +L  +   Q+ T  G     +LRI+R G+ I+E A   L      +W+++ + +
Sbjct: 418  MDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNIN 477

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV    +R
Sbjct: 478  DMFDAYIVVSFTNVTLVLSIG--ETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIR 535

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLE 529
             +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+   + 
Sbjct: 536  HIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMS 593

Query: 530  YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLC 588
             +++CL I P+ E    S+  AVG + D ++RI SL PD  L           P S+L  
Sbjct: 594  GDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDPDDCLQPLSVQSVSSAPESLLFL 652

Query: 589  AFE-------GISY-----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
              +       G  Y     L   L +G L    ++M TG+L+D +   LG +P  L    
Sbjct: 653  EVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCI 712

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              +   +   S RP + Y      L + ++   +     F+S    + +       L I 
Sbjct: 713  VSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIF 772

Query: 697  TIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESEMHFVRLLD---- 750
            TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E      LD    
Sbjct: 773  TIERLGETFNETAIPLRYTPRKFVILPKKKYIAVIESDKGAFSAEEREAAKKECLDASGA 832

Query: 751  -----------------DQTFEFISTYPLDTFEY-------------------------- 767
                                 E  +T+P + + Y                          
Sbjct: 833  AENGNANNGDPMENGDGQDGAEEGNTFPDEQYGYPKAESERWVSCIRILDPRSRDTTCLL 892

Query: 768  -------GCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKG----RILVFIVEDGKLQL 815
                     SI + +F D +      +GTA  L      T       +  F+ E   L+L
Sbjct: 893  ELQDNEAAVSICTVNFHDKEHGTLLAIGTAKGLQFWPRRTLAGGFIHVYKFVDEGRSLEL 952

Query: 816  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQ 874
            + + + +    +L  F G+LLA +   ++LY     D G R+L  +C +      L  + 
Sbjct: 953  LHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLLRKCENKLFPRTLVSIH 1007

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            T  D I VGD+ +S     Y+ +E  +   A D    W++  + +D D   GA+   N++
Sbjct: 1008 TYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTTAQHIDFDTMAGADKFGNIY 1067

Query: 935  TVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 976
              R                  K  +G  +    ++E + ++H+G+ V   +  SL+    
Sbjct: 1068 FARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLI---- 1123

Query: 977  DSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G    +I+GTV G +G ++A    E   F   L+ +LR+    + G +H  +RS  
Sbjct: 1124 ---PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRS-- 1178

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    K+ +DGDL E +  L      +I+  ++ +  E+ K++E++
Sbjct: 1179 ---AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEILKKLEDI 1224


>gi|413948668|gb|AFW81317.1| hypothetical protein ZEAMMB73_752618 [Zea mays]
          Length = 122

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 93/110 (84%), Positives = 100/110 (90%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
           M++WNYVVTAHKPT+V+HSCVGNFTSP +LNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1   MNVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDR 110
           RIAT+ELFRPH E QDFLFIATERYKFCVLQWD E SELITR+   V  R
Sbjct: 61  RIATIELFRPHNETQDFLFIATERYKFCVLQWDTEKSELITRSHLHVVCR 110


>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
          Length = 1220

 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 289/1236 (23%), Positives = 510/1236 (41%), Gaps = 190/1236 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQ----PMLDVPIYGR 61
            Y +T   PTN+  + +G F+  +E  ++ A  +R+   LL P   Q     +L   ++G 
Sbjct: 11   YSLTLQPPTNINQAILGQFSGTKEQQILTASGSRLS--LLRPDPSQGKVITLLTHDVFGI 68

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQW---DAESSELITRAMGDVSDRIGRPTDNG 118
            I ++  FR  G  +D++ +AT+  +  ++++   D     +     G    R   P   G
Sbjct: 69   IRSIAAFRLAGSNKDYVILATDSGRITIIEYIPADNRFQRIHLETFGKSGVRRVVP---G 125

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q    DP  R  LI     + L  V+  + + +L  +  +   +  V+ I  +    G A
Sbjct: 126  QYLAADPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHKPGVIVISLVALDVGYA 185

Query: 174  KPTIVVLYQDNKDA---------RHVKT----YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  ++         R  +T    YE+ L     V   WS + +D+ A +L 
Sbjct: 186  NPVFAALELDYAESDQDPTGEAYREAETLLVYYELDLGLNHVVRR-WS-DTVDSTASMLF 243

Query: 221  PVP-----PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLL 270
             VP     P   GVL+ GEE I Y  +N  A++  IP R   T+     R    G  + L
Sbjct: 244  QVPGGSDGP--SGVLVCGEENITYRHSNQEAYRVPIPRRRGATEDPNRKRTIVSGVMHKL 301

Query: 271  GDHAGLLHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNA 312
               AG    L+ T + +                  +V  LKI+      +AS++  L + 
Sbjct: 302  KGSAGAFFFLLQTEDGDLLKLTLDMVEDDDGNPTGEVLRLKIKYFDTIPVASSLCILKSG 361

Query: 313  VVYIGSSYGDSQLIKL---------------NLQPDAKGSY------------VEVLERY 345
             ++  S +G+ Q  +                N   + K  Y            + ++E  
Sbjct: 362  FLFSASEFGNHQFYQFEKLGDDDDELEFSSDNFPHEPKAPYEPVYFYPRPAENLALVESI 421

Query: 346  VNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 404
             ++ P++D  V +L      Q+ +  G     + R++++ + +NE  + +L G    +W+
Sbjct: 422  ESMNPMLDCKVANLTDDDVPQIYSVCGNGARSTFRMLKHALEVNEIVASQLPGTPTAVWT 481

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
             +   D+ +D F+V+SF + T +L++   + +EE    GF S   TL       + L+QV
Sbjct: 482  TKVRRDEEYDAFIVLSFNNGTLVLSIG--ETVEEVTDTGFLSSVPTLAVQQLGDDGLIQV 539

Query: 465  TSGSVRLVSSTSRELR-NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 522
                +R +    R+ R NEW +P   S+  A  N  QV++A   G +VY E+  DG L E
Sbjct: 540  HPKGIRHI----RDGRVNEWAAPQHRSIVAAATNERQVVVALSSGEIVYFEMDTDGSLAE 595

Query: 523  VKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
                +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L          
Sbjct: 596  YDEKKEMFGTVTCLSLGAVPEGRLRSSYLAVGC-DDCTVRILSLDPETTLDNMSIQALTA 654

Query: 581  IPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             P S+L+ A +  S      YL   L  G  L  +L+  TGELTD ++  LG + + L  
Sbjct: 655  APSSLLIMAMDDSSAGGTALYLHIGLHSGVYLRTVLDEVTGELTDTRQRFLGPKLVRLFQ 714

Query: 635  FSSKNTTHVFAASDRPTVIY--SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
             S +    V A S RP + Y  S  K    + ++  E+     F+S    + +       
Sbjct: 715  VSVQRRVCVLALSSRPWLGYDDSKAKNFAMTRLDYSELEWGWNFSSEQCEEGMVGIHGNF 774

Query: 693  LTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR---- 747
            L I +I+ +    I +S PL   PRR+    +   F      N + + +     +     
Sbjct: 775  LRIFSIEKLGDALIQKSFPLTYTPRRLVKHPEFGIFYTIEADNNTLSPDLRRQLIEAPGV 834

Query: 748  ------LLDDQTFEF-----------------------ISTYPLDTFEYGCSILSCSF-S 777
                  +L  + F +                         T  L+  E    +   SF S
Sbjct: 835  TNGDASVLPPEDFGYPRGNGRWASCISVVDPVGEDPGVTQTIELEGNEAAVCMAVASFVS 894

Query: 778  DDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGK 834
                 Y  VGT   ++    + ++G I  +  V+DG +L+L+ + + +    +L AF G+
Sbjct: 895  RGGESYLIVGTGRNMILSPRQFSEGYIHAYRFVKDGTQLELVHKTKVEEPPTALLAFQGR 954

Query: 835  LLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
            +L  I   +++Y    K ML     R+ QSE       L + +QT+G  +VVGD+ + ++
Sbjct: 955  ILVGIGNVLRIYDLGIKQML-----RKAQSEVSSK---LIVSLQTQGSRVVVGDVEEGVT 1006

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE--- 947
             ++YK E   +     D    W +   ++D     G +   NL+ +R + + + D +   
Sbjct: 1007 YVVYKPEINKLLPFVDDTIKRWTTCTTMVDYQSVAGGDKFGNLWILRVSDKASQDADEPG 1066

Query: 948  --------RG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
                    RG       RL ++   +  +        SLV       VG    +++  + 
Sbjct: 1067 SELQLVHARGYLHGAPNRLALMAHVYTQDVPMSICKASLV-------VGGQEVLVWSGLQ 1119

Query: 993  GVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
            G +G +   +  +   F + L+T++R+    + G +H  +RS+      V  K  +DGDL
Sbjct: 1120 GTVGALVPFVSRDDADFFQNLETHMRQEDAPLAGRDHLMYRSY-----YVPVKGVIDGDL 1174

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             E F  L R +   I+  ++ SV E+ +++    R+
Sbjct: 1175 CERFNLLPREKKQMIAGELDRSVREIERKISVSARV 1210


>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
            JEC21]
 gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1217

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 291/1236 (23%), Positives = 503/1236 (40%), Gaps = 189/1236 (15%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAK-CTRIEIHLL--TPQGLQPMLDVPIYGRIAT 64
            +T   PTNV+ + VG+F+  +   ++  +  T++EI  L  T   L  ++    +G I  
Sbjct: 6    LTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAFGTIRN 65

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
            +  FR  G  +D++   ++  +  +L++    +        +V  + G R    GQ   +
Sbjct: 66   IAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESLYQEVFGKSGSRRIVPGQFLAV 125

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  L+G      L  V+  + +G+L  +  +   +   L    +    G   P   
Sbjct: 126  DPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHIVGVDQGYDNPLYA 185

Query: 179  VLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP-- 223
             L  D  ++             +H+  YE+ L     V   WS+   D  A+LL+ VP  
Sbjct: 186  ALETDYSESDQDSTGEAYENTQKHLTFYELDLGLNHVVRK-WSEPT-DRRANLLVQVPGG 243

Query: 224  ----------PPLCGVLIIGEETIVYCSANA-FKAIPIRPSITKAYGRVDADGSR----- 267
                      P   GVL+  E+ I++   +     IPI         R   D SR     
Sbjct: 244  QNANSDRFEGP--SGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLVQR--GDKSRGLIIV 299

Query: 268  ------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
                        +LL    G L+ + I H  E V  LKI+      +A+++  L    +Y
Sbjct: 300  SAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIY 359

Query: 316  IGSSYGDSQLIKLNLQPDAKG-------SYVE----------------------VLERYV 346
            + S + D  L +     +  G        Y E                      +++   
Sbjct: 360  VASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDTVP 419

Query: 347  NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 403
            +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L G+   +W
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVW 479

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            +L+ + DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGNAGLLQ 537

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 522
            V    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 538  VHPYGLRHIRAADRV--DEWPAPPGQTIVAATTNRRQVVIALSTAELVYFELDPEGSLSE 595

Query: 523  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 596  YQEKKALPGNATCVTIAEVPEGRRRTSFLAVGC-DNQTVSIISLEPDSTLDTLSLQALTA 654

Query: 581  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 655  PPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
               + +    V A S R  ++Y+    L    +    + +    ++A  PD L       
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQS---------RTFAICSLKNQSCAEES 741
            L I  I  + +KL   S  L   PR+ I H   S         RT++  +++     +ES
Sbjct: 775  LRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIERIVKQKES 834

Query: 742  E--------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
            E                             VR+LD    E I T  LD  E   SI    
Sbjct: 835  EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTLDLDEDEAAFSIAIAY 894

Query: 776  FS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 831
            F       +  VGT      + +  K G + V+ I E G+ L+ + + +T      L  F
Sbjct: 895  FERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRILEFLHKTKTDDIPLCLAGF 954

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 890
             G LLA I + ++LY+      G + L  +C ++G   A+  +  +G  I+VGD+ +S  
Sbjct: 955  QGFLLAGIGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTF 1009

Query: 891  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 942
              +Y+    +I  R     A D    W++ V  +D +     +   N+F  R +   SE 
Sbjct: 1010 YCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEK 1065

Query: 943  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-------IFG 989
              D+  G      +  ++G  H  E +  +  GS+V     + + +IP V       ++ 
Sbjct: 1066 VDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVV-----TSITKIPLVAGGRDVLVYT 1120

Query: 990  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            T++G +G +   +  +   F+  L+ ++R     + G +H  +R +      V  K  +D
Sbjct: 1121 TISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISLVGRDHIAYRGY-----YVPIKGVVD 1175

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1176 GDLCESFSLLPYPKQQAIALDLDRSVGDVLKKLEQM 1211


>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
          Length = 1188

 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 290/1222 (23%), Positives = 508/1222 (41%), Gaps = 184/1222 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++ A  +++ +H   P QG +Q +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPAQGKVQTLYSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  ++++   +     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSSKDYIIIGSDSGRITIVEY-VPAQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
            Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYE 184

Query: 169  --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
              ++   +     + QD     + +T      YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRR-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       GVL+  E+ IVY  +N  AF+  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENPERKRCITAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLH---LLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L    + ++  E EK TG    LK++      +AS++  L +  +++ 
Sbjct: 303  AFFFLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVA 362

Query: 318  SSYGD-----------------------SQLIKLNLQP----DAKGSYVEVLERYVNLGP 350
            S  G+                       S +I   L P          + ++E   +L P
Sbjct: 363  SETGNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++   + ++  +   Q+ T  G            G  I+E    EL  +   +W+ + S 
Sbjct: 423  LMAASITNITEEDAPQIYTLCG-----------TGARISEIVESELPSVPSAVWTTKLSR 471

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D FD ++V+  I ET          +EE    GF S   TL       + L+QV    +
Sbjct: 472  NDQFDAYIVL--IGET----------VEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 519

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 520  RHIHADQR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQ 577

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV- 585
            +   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 578  MSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 636

Query: 586  LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
            ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L + S K  
Sbjct: 637  IMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQ 696

Query: 641  THVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
              V A S R  + YS    K    + +N   +     F+S    + +   +   L I +I
Sbjct: 697  RAVLALSSRSWLGYSDVQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSI 756

Query: 699  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEM------------ 743
            + +   L    IPL   PR      +   F +    N   S A ++++            
Sbjct: 757  EKLDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNILSPATKAKLLSESTAVNGDSA 816

Query: 744  --------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYY 784
                          H+   ++++D   T   +S   L+  E   SI + SF S +   + 
Sbjct: 817  ELPPEDFGYPRGTNHWASSIQVVDPIHTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFL 876

Query: 785  CVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VGT   ++      T G I ++   E+GK L+ I + + +    +L  F G+LLA I  
Sbjct: 877  VVGTGKDMVVSPRTFTCGFIHIYRFQEEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGP 936

Query: 842  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
             +++Y     D G R+L  +C       + + +QT+G  I+V D+ +S++ ++YK++E A
Sbjct: 937  DLRIY-----DLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA 991

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEY 957
            +   A D    W +   ++D +   G +   N++ +R   K SE A ++  G   +    
Sbjct: 992  LIPFADDIIPRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQ 1051

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNGVIGV-IASLP 1002
            +L    NR    SLV+     D   IPT I  T              + G +G+ +  + 
Sbjct: 1052 YLQGAPNRL---SLVIHFYSQD---IPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFIT 1105

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             +   F + L+  L      + G +H  +R +         K  +DGDL E+FL L   +
Sbjct: 1106 RDDVDFFQTLEMQLASQNPPLAGRDHLIYRGY-----YAPCKGVIDGDLCETFLLLPNDK 1160

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 1161 KQAIAGELDRSVREIERKISDM 1182


>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
 gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
          Length = 1232

 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 270/1250 (21%), Positives = 503/1250 (40%), Gaps = 191/1250 (15%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQEL-------------NLIIAKCTRIEIHLLTPQG 49
            ++ Y +T  + T    + +G+F+                   + +A+ + +++    P+ 
Sbjct: 1    MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSGSGSTQEIAVARGSTLDLLRPDPET 60

Query: 50   --LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV 107
              L+ +L V ++G I +L  FR  G  +D+L + ++  +  +L++  + + L        
Sbjct: 61   GRLRTLLSVDVFGAIRSLAQFRLTGANKDYLVVGSDSGRLVILEYSPDRNRLDKVHQETF 120

Query: 108  SDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIK 167
                 R    GQ+  +DP  R + +   +    V   +     +   +  LE  +   + 
Sbjct: 121  GKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNTLT 180

Query: 168  FLY-----GCAKPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN-------- 211
            F       G   P    +  +  ++    T + A + +    F E     N+        
Sbjct: 181  FALAALDCGFDNPVFAAIELEYAESDRDPTGQAANQAQKLLTFYELDLGLNHVSRKVSEP 240

Query: 212  LDNGADLLIPVP---PPLCGVLIIGEETIVYCSANAFK---AIPIRPSITKAYGRVDADG 265
            +DNGA+LL+ VP       GVL+  +  ++Y +    +    IP R  +    G +    
Sbjct: 241  IDNGANLLVTVPGGGDGPSGVLVCCDNFVLYRNQGHPEIRAVIPRRADLPAERGVLIVAA 300

Query: 266  SR--------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIG 317
            +         +LL    G +  + + H  + V+ L+I+      + S +  L +  ++  
Sbjct: 301  ATHKQKSMFFFLLQTEYGDIFKVDLDHNGDTVSELRIKYFDTIPVTSAVCVLRSGFLFAA 360

Query: 318  SSYGDSQLIKLN--------------------------LQPDAKGSYVEVLERYVNLGPI 351
            S +G+  L +                             QP A  + + + E   +L P+
Sbjct: 361  SEFGNHALYQFRDIGRDADVESSSATLMETEEGFQPVFFQPRALKNLMRIDE-IESLMPV 419

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTD 410
            +D  V +L  +   Q+ T  G     +LRI+R G+ I+E A   L      +W+++ + +
Sbjct: 420  MDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNIN 479

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV    +R
Sbjct: 480  DMFDAYIVVSFTNVTLVLSIG--ETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIR 537

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLE 529
             +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+   + 
Sbjct: 538  HIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMS 595

Query: 530  YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLC 588
             +++CL I P+ E    S+  AVG + D ++RI SL PD  L           P S+L  
Sbjct: 596  GDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDPDDCLQPLSVQSVSSAPESLLFL 654

Query: 589  AFE-------GISY-----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
              +       G  Y     L   L +G L    ++M TG+L+D +   LG +P  L    
Sbjct: 655  EVQASIGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCV 714

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
              +   +   S RP + Y      L + ++   +     F+S    + +       L I 
Sbjct: 715  VSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESASSFSSDQCSEGVVAVAGDALRIF 774

Query: 697  TIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESEMHFVRLLD---- 750
            TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E      L+    
Sbjct: 775  TIERLGETFNETAIPLRYTPRKFVILPKKKYIAVIESDKGAFSAEEREAAKKECLEASGA 834

Query: 751  ------------------DQTFEFISTYPLDTFEY------------------------- 767
                              +   E  +T+P + + Y                         
Sbjct: 835  AENGNANNGDPMENGDGQEDGAEEGNTFPDEQYGYPKAESERWVSCIRILDPRSRDTTCL 894

Query: 768  --------GCSILSCSFSD-DSNVYYCVGTAYVLPEENEPT--KGRILVF-IVEDGK-LQ 814
                      SI + +F D +      VGTA  L      T   G I ++  V++G+ L+
Sbjct: 895  LELQENEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPRRTLAGGFIHIYKFVDEGRSLE 954

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-V 873
            L+ + + +    +L  F G+LLA +   ++LY     D G R+L  +C +      +  +
Sbjct: 955  LLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLLRKCENKLFPRTIVSI 1009

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 933
             T  D I VGD+ +S     Y+ +E  +   A D    W++A + +D D   GA+   N+
Sbjct: 1010 HTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAQHIDFDTMAGADKFGNI 1069

Query: 934  FTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL 975
            +  R                  K  +G  +    ++E + ++H+G+ V   +  SL+   
Sbjct: 1070 YFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLI--- 1126

Query: 976  PDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
                 G    +I+GTV G +G ++A    E   F   L+ +LR+    + G +H  +RS 
Sbjct: 1127 ----PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRS- 1181

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                     K+ +DGDL E +  L      +I+  ++ +  E+ K++E++
Sbjct: 1182 ----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEILKKLEDI 1227


>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
          Length = 908

 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 217/927 (23%), Positives = 401/927 (43%), Gaps = 150/927 (16%)

Query: 280  LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN---------- 329
            + +  +++ VT ++++      +A+ +  L    +++ S +G+  L ++           
Sbjct: 4    ITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPE 63

Query: 330  --------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAY 374
                           QP    + V +++   +L PI+ FC + DL  +   Q+    G  
Sbjct: 64   FSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADLANEDTPQLYVACGRG 121

Query: 375  KDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
               SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   
Sbjct: 122  PRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG-- 179

Query: 434  DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 493
            + +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++  
Sbjct: 180  ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVK 237

Query: 494  ATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAA 551
               N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  A
Sbjct: 238  CAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 297

Query: 552  VGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GIS 594
            VG+  D +VRI SL   + +  + L  + +P +   LC  E                G  
Sbjct: 298  VGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFL 354

Query: 595  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 654
            YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + Y
Sbjct: 355  YLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSY 414

Query: 655  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGE 713
            S   +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL  
Sbjct: 415  SYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQY 474

Query: 714  HPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM----- 743
             PR+ + H E +            T A  + + Q  AEE             +EM     
Sbjct: 475  TPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFL 534

Query: 744  --------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 783
                                  +R+++      +    L+  E   S+  C FS+    +
Sbjct: 535  NENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDW 594

Query: 784  YC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAI 839
            Y  VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  +
Sbjct: 595  YVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGV 654

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKH 896
             + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK 
Sbjct: 655  GKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKR 707

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE-------- 946
             E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE        
Sbjct: 708  NENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKAL 767

Query: 947  -ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
             +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++
Sbjct: 768  WDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGIL 820

Query: 999  ASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
                 HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  
Sbjct: 821  VPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNS 875

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +   +   +S+ ++ +  E+ K++E++
Sbjct: 876  MEPNKQKNVSEELDRTPPEVSKKLEDI 902


>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
          Length = 967

 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 234/957 (24%), Positives = 412/957 (43%), Gaps = 115/957 (12%)

Query: 207  WSQNNLDNGADLLIPVPPPL---CGVLIIGEETIVYCSAN--AFK-AIPIRPSITKAYGR 260
            W+ + +D  A +L  VP       GVL+ G++ I Y  +N  AF+ AIP R   T+   R
Sbjct: 41   WA-DAVDRTASVLFQVPGGTDGPSGVLVCGDDNITYRHSNQEAFRVAIPRRRGATEDPQR 99

Query: 261  VDA--DGSRYLLGDHAGLLHLLVITHEKE------------------KVTGLKIELLGET 300
              +   G  + L   AG    L+ T + +                  +V  LKI+     
Sbjct: 100  KRSIVAGVMHKLKGAAGAFFFLLQTEDGDLFKITIEMVEDDQGQPTGEVKRLKIKYFDTV 159

Query: 301  SIASTISYLDNAVVYIGSSYGDSQLIKL---------------NLQPDAKGSYVEV---- 341
             +AS++  L +  +++ S +GD Q  +                +   D    Y  V    
Sbjct: 160  PVASSLCILKSGFLFVASEFGDHQFYQFEKLGDDDEETEFVSDDFPTDPTEPYTPVYFHP 219

Query: 342  --------LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQAS 393
                    +E   ++ P++D  V +L      Q+ +  G     + R +++G+ ++E   
Sbjct: 220  RQAENLSLVESIDSMNPLMDCKVANLTNADAPQIYSICGTGARSTFRSLKHGLEVSEIVE 279

Query: 394  VELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF 452
             EL G+   +W+ + +  D +D ++++SF + T +L++   + +EE    GF S   TL 
Sbjct: 280  SELPGVPSAVWTTKLTQGDTYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSTASTLA 337

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 512
                  + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY
Sbjct: 338  VQQLGEDGLIQVHPKGIRHIRADRR--VNEWAAPQHRSIVAATTNERQVAVALSSGEIVY 395

Query: 513  LEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLN 569
             E+  DG L E  +  ++   ++CL +  + E    S   AVG   D +VRI SL PD  
Sbjct: 396  FEMDSDGSLAEYDEKKEMSGTVTCLSLGDVPEGRVRSPYLAVGC-DDSTVRILSLDPDST 454

Query: 570  LITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKV 623
            L  K        P ++ + A    S      YL   L  G  L  +L+  TGELTD +  
Sbjct: 455  LENKSVQALTSAPSALSIMAMADSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRLR 514

Query: 624  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAF 681
             LG +P  L   S +  T V A S RP + Y+    K  + + +N   +     F+S   
Sbjct: 515  FLGPKPAKLFKVSVQGQTAVLALSSRPWLGYTDPVTKAFMLTPLNYPALEWGWNFSSEQC 574

Query: 682  PDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAE 739
             + +   +   L I +I+ +   L   SIPL   PRR + H EQ   + I S  N     
Sbjct: 575  TEGMVGIQGQNLRIFSIEKLTDNLLQESIPLTYTPRRFVRHPEQPLFYTIESDNNVLSPA 634

Query: 740  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT 799
              +    +LL+D +        L   E+G       ++       C+         +  T
Sbjct: 635  TKQ----KLLEDPSVVNGDAAVLPPEEFGYPRGRGHWAS------CISVV------DPVT 678

Query: 800  KGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
            + ++L  I  +G    + E        +L  F G+LLA + + +++Y   ++    R+ Q
Sbjct: 679  EKKVLHTIHFEGNEAAVEEPPM-----ALLGFQGRLLAGVGKDLRIYDLGMK-QLLRKSQ 732

Query: 860  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
            +E   +   L + ++T+G  I+V D+ +S+ +++YK +E  +     D  A W S   ++
Sbjct: 733  AEVVPN---LIVGLRTQGSRIIVSDVQESVVMVVYKFQENRLIPFVDDTIARWTSCSTMV 789

Query: 920  DDDIYLGAENNFNLFTVR---KNSEGATDEERG------RLEVVGEYHLGEFVNRFRHGS 970
            D +   G +   NL+ +R   K SE A +E  G      R  + G  H    +  F    
Sbjct: 790  DYETVAGGDKFGNLWLLRCPAKASEEADEEGSGAHLLHERQYLQGAPHRLTLMAHFYSQD 849

Query: 971  LVMRLPDSD--VGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
            + M +  ++  VG    +++  + G +G+ I  +  E   F + L+ ++R     + G +
Sbjct: 850  IPMSIQKTNLVVGGPDCLLWAGLQGTLGILIPFVGREDVDFFQTLEQHMRNEDAPLAGRD 909

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            H  +RS+      V  K  +DGDL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 910  HLIYRSY-----YVPVKGMIDGDLCERYTLLPTDKKQMIAGELDRSVREIERKISDI 961


>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
            H99]
          Length = 1217

 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 290/1236 (23%), Positives = 503/1236 (40%), Gaps = 189/1236 (15%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAK-CTRIEIHLL--TPQGLQPMLDVPIYGRIAT 64
            +T   PTNV+ + VG+F+  +   ++  +  T++EI  L  T   L  ++    +G I  
Sbjct: 6    LTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAFGTIRN 65

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
            +  FR  G  +D++   ++  +  +L++    +        +V  + G R    GQ   +
Sbjct: 66   IAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESMYQEVFGKSGSRRIVPGQFLAV 125

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  L+G      L  V+  + +G+L  +  +   +   L    +    G   P   
Sbjct: 126  DPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHVVGVDQGYDNPLYA 185

Query: 179  VLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP-- 223
             L  D  ++             +H+  YE+ L     V   WS+   D  A+LL+ VP  
Sbjct: 186  ALEIDYSESDQDPTGEAYENTQKHLTFYELDLGLNHVVRK-WSEPT-DRRANLLVQVPGG 243

Query: 224  ----------PPLCGVLIIGEETIVYCSANA-FKAIPIRPSITKAYGRVDADGSR----- 267
                      P   GVL+  E+ I++   +     IPI         R   D SR     
Sbjct: 244  QSANSDRFEGP--SGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLVQR--GDKSRGLIIV 299

Query: 268  ------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
                        +LL    G L+ + I H  E V  LKI+      +A+++  L    +Y
Sbjct: 300  SAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIY 359

Query: 316  IGSSYGDSQLIKLNLQPDAKG-------SYVE----------------------VLERYV 346
            + S + D  L +     +  G        Y E                      +++   
Sbjct: 360  VASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDTVP 419

Query: 347  NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 403
            +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L G+   +W
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVW 479

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            +L+ + DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGNAGLLQ 537

Query: 464  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 522
            V    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 538  VHPYGLRHIRAADR--VDEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSE 595

Query: 523  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 580
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 596  YQEKKALPGNATCVTIAEVPEGRRRTPFLAVGC-DNQTVSIISLEPDSTLDTLSLQALTA 654

Query: 581  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 655  PPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
               + +    V A S R  ++Y+    L    +    + +    ++A  PD L       
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQS---------RTFAICSLKNQSCAEES 741
            L I +I  + +KL   S  L   PR+ I H   S         RT++  +++     +ES
Sbjct: 775  LRIFSIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIERIVKQKES 834

Query: 742  E--------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
            E                             VR+LD    E I T  LD  E   SI    
Sbjct: 835  EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTLDLDEDEAAFSIAIAY 894

Query: 776  FS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 831
            F       +  VGT      + +  K G + V+ I E G+ L+ + + +T      L  F
Sbjct: 895  FERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRVLEFLHKTKTDDIPLCLAGF 954

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 890
             G LLA + + ++LY+      G + L  +C ++G   A+  +  +G  I+VGD+ +S  
Sbjct: 955  QGFLLAGVGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTF 1009

Query: 891  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 942
              +Y+    +I  R     A D    W++ V  +D +     +   N+F  R +   SE 
Sbjct: 1010 YCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEK 1065

Query: 943  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-------IFG 989
              D+  G      +  ++G  H  E +  +  GS+V     + + +IP V       ++ 
Sbjct: 1066 VDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVV-----TSITKIPLVAGGRDVLVYT 1120

Query: 990  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            T++G +G +   +  +   F+  L+ ++R       G +H  +R +      V  K  +D
Sbjct: 1121 TISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISPVGRDHIAYRGY-----YVPIKGVVD 1175

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1176 GDLCESFSLLPYPKQQAIATDLDRSVGDVLKKLEQM 1211


>gi|405121632|gb|AFR96400.1| hypothetical protein CNAG_03173 [Cryptococcus neoformans var. grubii
            H99]
          Length = 1276

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 225/912 (24%), Positives = 407/912 (44%), Gaps = 125/912 (13%)

Query: 238  VYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL- 296
            V+ S   F  + I  ++ + +G     G+  ++GD  G    L    EK    G+   + 
Sbjct: 353  VWRSRQGFGTV-IAATVIEDHG----SGASVVIGDEYGAFTALGWEFEKGLGAGMDGRVR 407

Query: 297  -----LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQ------PDAKGSY------- 338
                 LG +S  S+I+YLD++ +++ S+  DS L++L         P  KG         
Sbjct: 408  VLRTYLGASSPPSSITYLDSSHLFVSSAVADSVLLRLPTVESSTNVPSGKGKGREVISPI 467

Query: 339  -----------------------VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYK 375
                                   +E+LER++N+ P+ D C V  E      +V  SGA +
Sbjct: 468  GDQLDKWEVLYEIGKDRNDTDEGLEILERWMNIAPVKDLCAVKDEGGNLSHLVLASGASE 527

Query: 376  DGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 434
              SLR+VR+G+G+ E  +++ L  ++ MWSL  ST  P    L++S  + T  + + L+ 
Sbjct: 528  SNSLRVVRSGVGLEELVTIQGLHDVQKMWSLTDSTAVPR---LLLS--TSTSTVLLQLQP 582

Query: 435  ELEETEIEGFCSQTQTLFCHDAIYNQLV-QVTSGSVRLVSSTS-RELRNEWKSPPGYSVN 492
            E+    I     +++TL        +L+ QVT   + L S  S  +L  + K   G  + 
Sbjct: 583  EISVIPIVDVIFKSETLAAGILPGAELLAQVTPRGLSLWSDLSVGQLEAQMKVDKGTEIV 642

Query: 493  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAV 552
             A   A   ++A  GG+LV   + D   +      ++ E+S + I+   ++ S   + A 
Sbjct: 643  CAQVTADWAVVAKKGGNLVVFHVSDTGFSPEGTIDVKEEVSAVAISNSSDSSSPIIVIAT 702

Query: 553  GMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY--------LLCALGDG- 603
              WT  +  +++L  ++      + G  IP      + +  S+        LL  L +G 
Sbjct: 703  --WTAKTF-VYTLSQIS----NGVDGLSIPTKSSATSLQLRSHPFYPAGIQLLSGLDNGL 755

Query: 604  ---HLLNFLLNMKTGEL--TDRKKVSLGTQPITLRTFSSKNTTHVFAA---SDRPTVIYS 655
               H L+   +   GEL     K  SLG +P+ L    S +      +   ++R +VI+ 
Sbjct: 756  LHIHDLDTSDSGDAGELMVKSSKSASLGLRPLVLHPCESTHGDEKVISVGLTERMSVIFE 815

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EH 714
            S  ++ +S+VN+K +      N+++ P     ++   L++  I+ ++KLH+++   G E 
Sbjct: 816  SKGRVEFSSVNIKNIMAATAVNTSSGPVFALFSRTSGLSLVKINSLKKLHVQTCDTGNES 875

Query: 715  PRRICHQEQSRTFAICSLKNQSCAEES---EMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
              ++ + ++ +  A C L  ++   +    E +FV++ D  + E +S++ L   E   S+
Sbjct: 876  VSKLTYMDEYKAVA-CGLTRRTQLRDGDVEEENFVQIRDGTSLEPLSSFSLRGRELVTSL 934

Query: 772  LSCSFSDDSNVYYCVGTAYVLPEENEPT-----------KGRILVFIVEDGK------LQ 814
             S   +   ++Y  VGT  + P++ E +           +GR+L+   ++G       ++
Sbjct: 935  RSVFLT--GSIYLAVGTGILPPDDGEDSSWDEGNLAVVREGRVLLLEFKEGDAGSGWDIK 992

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-------H 867
            + AE  T GAVY+L   +G L  A   K+ +++    D    EL+               
Sbjct: 993  VKAELATVGAVYALEEIHGFLAVAAGSKLTIHRL---DHNPVELEETSSWASAYVISSLS 1049

Query: 868  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD--DIYL 925
            +L   +      ++VGD M+S+ +L     +G I +  R+   + ++A+ +L D  D  +
Sbjct: 1050 VLPPSLMRPEGALIVGDGMRSVIVLNVDEGDGMIYDDERNMATHGVTALGLLKDKGDGVV 1109

Query: 926  GAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
             ++ + NL T R N          +LE    + L E V RF+ GSLV      ++  IP 
Sbjct: 1110 ISDAHSNLLTYRLNQ---------KLERAATFGLHEEVTRFQSGSLVPTTTAPEI-IIPD 1159

Query: 986  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            V+F T  G +G+I  L       L+ LQ N+ K+ KG G +    WR   +     D   
Sbjct: 1160 VLFATREGRLGIIGELGTRSSRTLDDLQRNMSKIWKGPGEVGWSNWRRAGSNLVGKDTAG 1219

Query: 1046 FLDGDLIESFLD 1057
            F+DGD ++ FLD
Sbjct: 1220 FVDGDFVQKFLD 1231


>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
 gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
          Length = 1218

 Score =  201 bits (512), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 269/1243 (21%), Positives = 518/1243 (41%), Gaps = 198/1243 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V I+G I 
Sbjct: 4    YNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEIFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  +L++   +  L  +   +   + G R    GQ   
Sbjct: 64   SLMSFRLTGGTKDYIVVGSDSGRIVILEY-IPAKNLFEKVHQETFGKSGCRRIVPGQYLA 122

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
            IDP  R  ++G      L  ++  D + +L  +  +   +   L    +    G   P  
Sbjct: 123  IDPKGRAVMVGAVEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A    T E A K +    F E     N+        L+  A+ L+ VP   
Sbjct: 183  ACLEIDYEEADTDPTGEAASKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPGGN 242

Query: 224  --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
              P   GVLI  E  + Y   N      IR  I +    +D D  R              
Sbjct: 243  DGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268  ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
               +L     G +  + +  +++ VT +K++      +A+++  +    +++ S +G+  
Sbjct: 298  VFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVMKTGFLFVASEFGNHY 357

Query: 325  LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
            L ++                           P A  + V+V E   +L PI+   V DL 
Sbjct: 358  LYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRALRNLVQVDE-MDSLSPIMACQVADLA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   ++ +D +++V
Sbjct: 417  NEDTPQLYMLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVEEEYDAYIIV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R  
Sbjct: 477  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADKR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWK+P   ++     N  QV++A   G LVY E+   G L E  +   +  ++SC+ +
Sbjct: 533  VNEWKAPGKKTIMKCAVNQRQVVIALTAGELVYFEMDPTGQLNEYTERKAMPSDVSCMAL 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-GIS- 594
              +      S+  AVG+  D +VRI SL   + ++   L  + +P +   LC  E G + 
Sbjct: 593  GNVVPGELRSRFLAVGL-ADNTVRIISLDPSDCLSP--LSMQALPAAAESLCIVEMGAAD 649

Query: 595  ---------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                           YL   L +G LL  +L+  TG+L D +   LG++P+ L     + 
Sbjct: 650  KKPDSEESTVTQSNLYLNVGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRIKMQG 709

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
            +  V A S R  + Y    +   + ++ + + +   F+S   P+ +       L I  ++
Sbjct: 710  SEAVLAMSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALE 769

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQE--------------------QSRTFAICSLKNQSC 737
             +  +  + S PL   PR+ + H E                    Q R      ++  + 
Sbjct: 770  KLGAVFNQISFPLEYTPRKFVVHPETGKMILLETEHNAYTEETKKQRRVQMAEEMQEAAG 829

Query: 738  AEESEM-----------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
             EE E+                               +R++D           L+  E  
Sbjct: 830  DEEQELAKEMAEAFLSEDLPESIFGAPKAGSGMWASIIRIIDPVEGRTDKIVRLEQNEAA 889

Query: 769  CSILSCSFSD-DSNVYYCVGTA--YVLPEENEPTKGRILVF-IVED-GKLQLIAEKETKG 823
             SI    F++   +++  VG    Y L    + + G +  F I ED   L+L+ +     
Sbjct: 890  LSIALVKFNNHPESLFLVVGVVKEYQL-SPRQVSFGYLYTFRINEDVTDLELVHKTTVDE 948

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFI 880
            A  ++  ++G+LL  + + ++LY     D G ++L  +C +      I+++     G  +
Sbjct: 949  APAAVCPYHGRLLVGVGRMLRLY-----DLGKKKLLRKCENKYIPNQIVSICAT--GQRV 1001

Query: 881  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
             V D+ +S+ ++ YK +E  +   A D +  W++   ILD D    A+   N+  +R +S
Sbjct: 1002 FVSDVQESVYMVRYKRQENQLIIFADDTHPRWITCTTILDYDTVATADKFGNIAIIRLSS 1061

Query: 941  --EGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 982
                  DE         +RG L       +V+  +H+GE     +  +L+        G 
Sbjct: 1062 IITDDVDEDPTGNKALWDRGLLNGASQKADVLANFHVGETCMSLQKATLI-------PGG 1114

Query: 983  IPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
              ++++ +++G +GV+      E + F + L+ ++R     + G +H  +RS+       
Sbjct: 1115 SESLVYTSLSGTVGVLVPFTSREDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YY 1169

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              KN +DGDL E +  +   +   I++ ++ +  ++ K++E++
Sbjct: 1170 PVKNVIDGDLCEQYNSIEPAKQKSIAEDLDRNPSDVSKKLEDI 1212


>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
          Length = 1216

 Score =  201 bits (512), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 283/1235 (22%), Positives = 509/1235 (41%), Gaps = 178/1235 (14%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
            ++ Y +T    T ++H+  GNF+  ++  +II++   +E+    P    +  ++ V I+G
Sbjct: 1    MYLYNLTLQGSTAISHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKVEIFG 60

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I ++  FR  G  +D++ + ++  +  +L++   +  ++ +   +   + G R    GQ
Sbjct: 61   VIRSMMSFRLTGGTKDYIVVGSDSGRIVILEY-IPAKNILEKVHQETFGKSGCRRIVPGQ 119

Query: 120  IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120  YLAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFEN 179

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
            P    L  D ++A    T E A K +    F E     N+        L+  A+ LI VP
Sbjct: 180  PMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVP 239

Query: 224  -----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------- 267
                 P   GVLI  E  + Y   N      IR  I +    +D D  R           
Sbjct: 240  GGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATHK 294

Query: 268  ------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
                  +L     G +  + I  +++ VT +K++      +A+ +  L    +++   +G
Sbjct: 295  TKSMFFFLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVACEFG 354

Query: 322  DSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVD 358
            +  L ++             +  P  +G       R +          +L PI+   V D
Sbjct: 355  NHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACHVAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFL 417
            L  +   QV    G     SLR +R+G+ + E A  EL G    +W++R   DD +D+++
Sbjct: 415  LTGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL CH    + LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   S+     N  QV++A  GG LVY E+   G L E  +  +L  ++SC+
Sbjct: 533  V--NEWKAPGKKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLC----AF 590
             +  +      +   AVG+  D +VRI SL   + +    +  + +P S   LC     F
Sbjct: 591  ALGSVATGEQRAWFLAVGL-VDNTVRIISLDPADCLAPRSM--QALPASPESLCIVDQPF 647

Query: 591  EGIS----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
            E  +    +L   L +G LL   L+  +G+L D +   LG++P+ L     ++   V A 
Sbjct: 648  ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAV 707

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 706
            S R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  
Sbjct: 708  SSRTWLGYQYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767

Query: 707  RSI-PLGEHPRRICHQEQSRTFAICSLKNQSCAEE----------SEMHFV--------- 746
            ++   L   PR+      +    +    + +  EE           EM            
Sbjct: 768  QTFQQLDYTPRKFVINSDNNHIIVLETDHNAYTEEMKKQRRVQMAQEMREAAAGGTPEEQ 827

Query: 747  RLLDDQTFEFIS-TYPLDTF---EYGCSILSCSFS--DDSNVYYCVGTAYVLP-EENEPT 799
            +L ++    F+S   P + F   + G  + +      D S       T  +LP E+NE  
Sbjct: 828  QLANEMADAFLSDVLPENIFSSPKAGAGMWASQIRILDMSGGVGGCSTVCLLPLEQNEAA 887

Query: 800  KGRILV-----------FIVEDGKLQLIAEKE-TKGAVYSLNAFN-GKL----------- 835
                +V            +V   K  L++ +  ++G+++    +N GKL           
Sbjct: 888  VSLCVVRWAALTDNTPHLVVGVAKDALLSPRSCSEGSLHVYKIYNTGKLELVHKTPIDEY 947

Query: 836  ---LAAINQKIQL-YKWMLR--DDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKS 888
               LAA N K+      MLR  D G R+L  +C   H   L   ++T    I V D+ +S
Sbjct: 948  PGALAAFNGKLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIRQRIFVSDVQES 1007

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE 946
            +  + YK  E  +   A D N  W++   ILD D    A+   N+  +R  ++     DE
Sbjct: 1008 VFCVKYKKRENQLIIFADDTNPRWITNTCILDYDTVAMADKFGNVAVLRLPQSVSDDVDE 1067

Query: 947  ---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
                     +RG L       ++   +H+GE V   +  +L+        G    +++ T
Sbjct: 1068 DPTGNKALWDRGLLNGASQKGDITVNFHVGETVTSLQRATLI-------PGGSEALLYAT 1120

Query: 991  VNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            V+G +GV       E + F + L+ ++R     + G +H  +RS+         KN +DG
Sbjct: 1121 VSGALGVFLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSY-----YYPVKNVIDG 1175

Query: 1050 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DL E F  L   +   I+  +  +  E+ K++E++
Sbjct: 1176 DLCEQFNSLEPAKQKAIAGDLERTPAEVSKKLEDI 1210


>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
            (Spliceosome-associated protein 130) (SAP 130)
            (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130)
            (STAF130) [Ciona intestinalis]
          Length = 1216

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 264/1237 (21%), Positives = 501/1237 (40%), Gaps = 188/1237 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T + H+  GNF+  ++  + +++   +E+    P    +  ++ V ++G I 
Sbjct: 4    YGLTLQRATTIIHAVHGNFSGTKQQEIAVSRGKLLELLKPDPNTGKVHTLITVEVFGEIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D++   ++  +  +L++    ++     +        R    GQ   I
Sbjct: 64   SLMSFRLTGGNKDYVVCGSDSGRISILEYIPNKNKFEKIHLETFGKSGCRRIVPGQYLAI 123

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-------GCAK 174
            DP  R  +IG      L  ++  D++ +L  +  +   +       F+Y       G   
Sbjct: 124  DPKGRAVMIGALEKQKLVYILNRDSQARLTISSPLEAHKANT----FVYHMVGIDVGFEN 179

Query: 175  PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
            P    L  D ++A    T E     +    F E     N+        L+  A+ LI VP
Sbjct: 180  PMFACLELDYEEADTDPTGEAVQNTQQTLTFYELDLGLNHVVRKYSEPLEERANHLISVP 239

Query: 224  ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                   GVL+  E  I Y   N      IR  I +    +D D  R             
Sbjct: 240  GGNDGPGGVLVCAENYITY--KNFGDQPDIRTPIPRRRNDLD-DPERGMIVVCSATHKTK 296

Query: 268  ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
                +L+    G +  + +  +++ VT ++++      ++  +  L    +++ +  G+ 
Sbjct: 297  SMFFFLIQTEQGDIFKVTLETDEDMVTEIRLKYFDTVPVSMAMCVLRTGFLFVAAEMGNH 356

Query: 324  QLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDLE 360
             L ++             +  P  +G       R +          +L PI+   + DL 
Sbjct: 357  CLYQIAHLGDDDDETEFSSAMPLEEGDTFFYAPRALRNLVLVDELDSLSPIMTCLISDLA 416

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
             +   Q+    G     SLR++R+G+ ++E A  EL G    +W+++   ++ FD++++V
Sbjct: 417  NEDTPQLYVTCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKIKEEEEFDSYIIV 476

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF++ T +L++   + +EE    GF   T TL C     N LVQV    +R + +  R  
Sbjct: 477  SFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGENALVQVYPDGIRHIRADKR-- 532

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C+D+
Sbjct: 533  VNEWKTPGKKTILRCAVNQRQVVIALTGGELVYFEMDQSGQLNEYTERKEMNSEVVCMDL 592

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGIS-- 594
            + +      ++  AVG+  D +VRI SL   + +    +      P SV +    G    
Sbjct: 593  SKVPPTEQRTRFLAVGL-ADNTVRIISLDPTDCLQPLSMQALPATPESVCIIEIGGGEDE 651

Query: 595  ----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
                       L   L +G LL   L+  TG+L+D +   LGT+ + L    ++ +  V 
Sbjct: 652  TGAQKASGGLVLNIGLQNGVLLRTTLDNVTGDLSDTRTRYLGTRAVKLFRVLTQGSDAVL 711

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
            A S R  + Y    +   + ++ + +     F S   P+ +       L I  ++ +  +
Sbjct: 712  AMSSRTWLSYQHQNRFHLTPLSYESLEFASGFASEQCPEGIVAISANTLRILALEKLGTV 771

Query: 705  HIR-SIPLGEHPRRICHQEQSRTFAICSL------------KNQSCAEE----------- 740
              + S  L   PRR      S    I               + Q  AEE           
Sbjct: 772  FNQASTGLQYTPRRFAIHYDSGNVIILETDHNAYTEETKENRKQQMAEEMIEAAGEDERE 831

Query: 741  --SEMHF-------------------------VRLLDDQTFEFISTYPLDTFEYGCSILS 773
              +EM                           +RL+  ++ E I    L+  E   SI  
Sbjct: 832  LAAEMTAAFLRESLPEDKFGASKAGPGMWSSQIRLMHPRSGETIQKICLEQNEAALSIAI 891

Query: 774  CSF---SDDSNVYYCVGTAYVLPEENEPTKGRILVFIV--EDGKLQLIAEKETKGAVYSL 828
            C F   SDD+ V   V    ++        G I  + +  E  KL+L+ +        ++
Sbjct: 892  CKFPNNSDDTFVLVGVACELLINPRQARGGGEIHTYKINEEGNKLELVHKTVVDEVPSAI 951

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLM 886
              + G++L  + + +++Y     D G ++L  +C  + HI      +Q  G  I+V D+ 
Sbjct: 952  CPYQGRVLIGVGKLLRIY-----DLGKKKLLRKC-ENKHIPNYIASIQAVGHRIIVCDVQ 1005

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 946
            +S+  + Y+  E  +   A D    W+++  +LD +    ++   N+  +R  S+   D 
Sbjct: 1006 ESVHWVRYRRHENQLVVFADDTYPRWVTSATVLDWNTVAVSDKFGNISVLRLPSDVNDDV 1065

Query: 947  E-----------RG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
            +           RG       + EV+  YH+GE V   +  +L+        G   ++++
Sbjct: 1066 QDDPSGTKALWTRGILNGAMQKCEVLCMYHVGETVLSLQKTTLI-------PGGSESLVY 1118

Query: 989  GTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
             T++G IG++     HE + F + L+ ++R     + G +H  +RS+         KN +
Sbjct: 1119 TTLSGSIGMLVPFTSHEDHDFFQHLEMHMRNECPPLLGRDHLAYRSY-----YFPVKNVI 1173

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E F  +  ++   +++ ++    E+ K++E++
Sbjct: 1174 DGDLCELFNSMEASKQKSVAEELDRVPSEVSKKLEDI 1210


>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
          Length = 897

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 217/918 (23%), Positives = 396/918 (43%), Gaps = 150/918 (16%)

Query: 289  VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN------------------- 329
            VT ++++      +A+ +  L    +++ S +G+  L ++                    
Sbjct: 2    VTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEE 61

Query: 330  -----LQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYKDGSLRIVR 383
                  QP    + V +++   +L PI+ FC + DL  +   Q+    G     SLR++R
Sbjct: 62   GDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQMADLANEDTPQLYVACGRGPRSSLRVLR 119

Query: 384  NGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 442
            +G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + +EE    
Sbjct: 120  HGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--ETVEEVTDS 177

Query: 443  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 502
            GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++     N  QV+
Sbjct: 178  GFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKCAVNQRQVV 235

Query: 503  LATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 560
            +A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG+  D +V
Sbjct: 236  IALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGL-VDNTV 294

Query: 561  RIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYLLCALGDG 603
            RI SL   + +  + L  + +P +   LC  E                G  YL   L +G
Sbjct: 295  RIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNG 352

Query: 604  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 663
             LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS   +   +
Sbjct: 353  VLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLT 412

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQ 721
             ++ + +     F S   P+ +       L I  ++ +  +  + + PL   PR+ + H 
Sbjct: 413  PLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHP 472

Query: 722  EQSR-----------TFAICSLKNQSCAEE-------------SEM-------------- 743
            E +            T A  + + Q  AEE             +EM              
Sbjct: 473  ESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIF 532

Query: 744  -----------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYV 791
                         +R+++      +    L+  E   S+  C FS+    +Y  VG A  
Sbjct: 533  GAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKD 592

Query: 792  LPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
            L        G  +    +V +G KL+ + +   +    ++  F G++L  + + +++Y  
Sbjct: 593  LILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-- 650

Query: 849  MLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 905
               D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  E  +   A
Sbjct: 651  ---DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFA 705

Query: 906  RDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERGRL--- 951
             D    W++   +LD D   GA+   N+  VR   N+    DE         +RG L   
Sbjct: 706  DDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGA 765

Query: 952  ----EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQY 1006
                EV+  YH+GE V   +  +L+        G   ++++ T++G IG++     HE +
Sbjct: 766  SQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDH 818

Query: 1007 LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
             F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +   +   +
Sbjct: 819  DFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNV 873

Query: 1067 SKTMNVSVEELCKRVEEL 1084
            S+ ++ +  E+ K++E++
Sbjct: 874  SEELDRTPPEVSKKLEDI 891


>gi|321260749|ref|XP_003195094.1| hypothetical protein CGB_G1120W [Cryptococcus gattii WM276]
 gi|317461567|gb|ADV23307.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 1276

 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 221/885 (24%), Positives = 395/885 (44%), Gaps = 120/885 (13%)

Query: 265  GSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL------LGETSIASTISYLDNAVVYIGS 318
            G+  ++GD  G         EK    G    +      LG +S  S+I+YLD++ +++ S
Sbjct: 375  GATVVIGDEYGAFTAFGWEFEKGSGAGTDGRVRVLRTYLGASSPPSSITYLDSSHLFVSS 434

Query: 319  SYGDSQLIKLN--------LQPDAKGSYV----------------------------EVL 342
            +  DS L++               KG                               E+L
Sbjct: 435  AVADSVLLRFTTVESSSSVSSSKGKGRAATGPIGDQLDKWEVMYENGKERNDTDGGPEIL 494

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKG 401
            ER++N+ P+ D CVV  E      +V  SGA +  SLR+VR+G+G+ E  +++ L  ++ 
Sbjct: 495  ERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSLRVVRSGVGLEELVTIQGLHDVQK 554

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            MWSL   TD    + L++S  + T +L +  +  +  T    F S+T            L
Sbjct: 555  MWSL---TDSTATSRLLLSTSNSTVLLQLQPDISVIPTTDIIFNSETLAAGILPG-AELL 610

Query: 462  VQVTSGSVRLVSS-TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGIL 520
             Q+T   + L S   S +L  + +      +  A   A   ++A  GG+LV   + +   
Sbjct: 611  AQITPRGLFLWSDLNSGQLEAQVEVDKETEIVCAQVTAEWAVVAKNGGNLVVFHVSNTGF 670

Query: 521  TEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 580
                   ++ E+S + I+    + S S I A+  WT  +V +++L  ++      + G  
Sbjct: 671  NPKGTIDVKEEVSAVAISR--NSDSSSPIIAISTWTAKTV-VYTLSQIS----SGVDGLS 723

Query: 581  IPRSVLLCAFEGISY--------LLCALGDGHLLNFLLNMKTGELTD------RKKVSLG 626
            IP      + +  S+        LL  L +G L  + L+       D       K  SLG
Sbjct: 724  IPSKSSATSLQLRSHPSYPAGIQLLSGLDNGLLQIYDLDKDDMGGVDGLVVKSSKTTSLG 783

Query: 627  TQPITLR----TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 682
             +P+ L     T   +    V A ++R +VI+ S  ++ +S+VN+K +      N+++ P
Sbjct: 784  LRPLALHPCEITGGDEKVISV-ALTERMSVIFESKDRIEFSSVNIKNIMAAAAVNTSSGP 842

Query: 683  DSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSCAEES 741
                 ++   L++  I+ ++KLH+++   G E   ++ + ++ +  A C L  ++   + 
Sbjct: 843  VLALFSRTSGLSLLKINSLKKLHVQTCDTGNESISKLNYMDEYKAIA-CGLTRRTQLRDG 901

Query: 742  ---EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 798
               E +FV++ D  + E +S++ L   E   S+ S       ++Y  VGTA++ P++ E 
Sbjct: 902  DVEEENFVQIRDGTSLEPLSSFTLRERELVTSLRSVFLV--GSMYLAVGTAFLPPDDGED 959

Query: 799  T-----------KGRILVFIVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
            +           +GR+L+  +++G       +++ AE  T GAVY+L   +G L  A   
Sbjct: 960  SSWDEGNLAVVKEGRVLLLEIKEGDAGGGWDVKIKAELTTVGAVYALEEIHGFLAVAAGS 1019

Query: 842  KIQLYKWMLRDDGTRELQSECGHHG-----HILALY-VQTRGD-FIVVGDLMKSISLLIY 894
            K+ +++    D  + EL+             + AL+   TR +  ++VGD M+S+ +L  
Sbjct: 1020 KLTMHRL---DHNSVELEETSSWASAYVISSLSALHPSHTRPEGALIVGDGMRSVIVLNV 1076

Query: 895  KHEEGAIEERARDYNANWMSAVEILDD--DIYLGAENNFNLFTVRKNSEGATDEERGRLE 952
               +G I +  R+   + ++A+ +L D  D  + ++ + NL T R N          +LE
Sbjct: 1077 DEGDGMIYDDERNMATHGVTALGLLKDKGDAVVVSDAHSNLLTYRLNQ---------KLE 1127

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
                + L E V RF++GSLV      ++  IP V+F T  G +GVI  L       L+ L
Sbjct: 1128 RAATFGLHEEVTRFQNGSLVPTTTAPEI-IIPDVLFATREGRLGVIGELGTMSSRTLDDL 1186

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
            Q N+ K+ KG G +    WR   +     D   F+DGD ++ FLD
Sbjct: 1187 QRNMGKIWKGPGDVGWSNWRRAGSNLVGKDTAGFVDGDFVQKFLD 1231


>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
            98AG31]
          Length = 1210

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 274/1237 (22%), Positives = 513/1237 (41%), Gaps = 194/1237 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQG----LQPMLDVPIYG 60
            Y +T   P+ +T + VG+F+  ++ ++ I +  TR+E  LL P      +  ++    +G
Sbjct: 4    YNLTLLPPSAITCATVGSFSGTRQQDICICRGGTRLE--LLRPDASTGKMNSVISSDAFG 61

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             I +L  FR  G  +D++ + ++  +  VL++D   +  +            R    GQ 
Sbjct: 62   TIRSLTSFRLTGGTKDYIILGSDSGRIVVLEFDPVLNAFVKVHQETYGKSGARRVVPGQY 121

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKFLYG 171
               DP  R  ++       L  ++  D+   L      EA   N  +  +  +D+ F   
Sbjct: 122  LATDPKGRAVMVAAMEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGF--- 178

Query: 172  CAKPTIVVLYQD-------------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADL 218
               P    L  D             N   + +  YE+ L     V   WS+   +  A++
Sbjct: 179  -ENPLFAALEVDYGESDQDHTGEAFNSAEKMLTYYELDLGLNHVVRK-WSEPT-EPRANM 235

Query: 219  LIPVP-------------PPLCGVLIIGEETIVYCSANAFK---AIPIRPS--------- 253
            L+ VP             P   GVL+  E+ I+Y   N  +    IP R +         
Sbjct: 236  LLQVPGGQSATHADKFDGP--SGVLVCCEDMIIYKHQNVKEHRVPIPKRNTPFNDVERGV 293

Query: 254  -ITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNA 312
             I  A          +L+    G L  + I HE E+V  LKI+      ++S+++ L + 
Sbjct: 294  IIVAAVMHKMRGAFFFLVQTEEGDLFKVTIDHEDEEVQALKIKYFDTVPVSSSLTILKSG 353

Query: 313  VVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVN------------------------- 347
             +++ +  G+  L +     D         E+Y +                         
Sbjct: 354  FLFVAAEMGNHYLYQFEKLGDDDDETEFSSEQYPDNGCSDEPLPKAFFKPRPLQNLVLSD 413

Query: 348  ----LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GM 402
                L PI+D    +L      Q++T  G     SLRI+R+G+ ++E  + +L G    +
Sbjct: 414  ELESLAPIIDAKAANLLNTDSPQILTSCGRGSRSSLRILRHGLDVSEIVTSDLPGPPTNV 473

Query: 403  WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV 462
            W+ + + DD FD ++++ F++ T +L++   + + E    GF + + T+       N L+
Sbjct: 474  WTTKLNDDDLFDRYIILGFLNATLVLSIG--ETIVEVSDTGFLTNSPTISIQQLDKNGLL 531

Query: 463  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILT 521
            Q+    +R +         EWK P G  + V+T+N  QV++   GG L+Y E+  +G L 
Sbjct: 532  QIHPTGIRHIHLNGG--VTEWKVPAGRKIVVSTSNQRQVVVGLSGGELIYFELDLEGQLN 589

Query: 522  EVK-HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGE 579
            E +   ++   I+ L ++ + +    +   A+G+  +++V+I SL P+  L T       
Sbjct: 590  EYQEQKEMGSTITTLSLSEVPKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALT 648

Query: 580  IIPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
             +P S+ +      S        ++   L +G LL  +L+   G+LTD +   LG++P+ 
Sbjct: 649  SVPSSICIAELLDSSIDKNNETLFVNIGLSNGVLLRTVLDSVNGQLTDTRTRFLGSRPVK 708

Query: 632  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
            L      + T V A S R  + Y+    L ++ +    + ++  F++   P+ L      
Sbjct: 709  LLRVKVDSKTSVIALSSRTWLNYTYQNMLQFNPLIYDSIDNVHSFSAELCPEGLIGIVGS 768

Query: 692  ELTIGTIDDIQ-KLHIRSIPLGEHPRR----------ICHQEQSRTFAICSLKNQSCAE- 739
             L I TI  +  K+   S+PL   PR+          I  + + RT +  S+K +  AE 
Sbjct: 769  SLRIFTIPKLGIKVKQDSMPLSYTPRKMILDPVTKHVITIESEHRTMS-PSVKAERLAEH 827

Query: 740  -----ESEMHF-------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCS 775
                 E + H                    +R+ D      ++   L+  E   S    S
Sbjct: 828  KAQGLEFDEHIFNDEVLGLPRSEPGQWASCIRISDPLEKTTLTKIELENNEAATSAAIVS 887

Query: 776  FS--DDSNVYYCVGT---AYVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSL 828
            F+  D       VGT   A+V P       G + VF   ++GK L+L+ + E      ++
Sbjct: 888  FANQDLQGPLLVVGTAKDAFVQPRTCR--NGYLSVFKFTDNGKGLELLHKTEVDDIPTAI 945

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMK 887
              F G+L A I + ++++     D G ++L  +  +     A+  + T+G  ++VGD   
Sbjct: 946  IGFQGRLAAGIGKALRIF-----DLGKKKLLRKVENKTFSAAISSLSTQGPRLLVGDAQD 1000

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE- 946
            SIS  +YK  E  +   A D +  W +   ++D D   G +   N++ V +  +  +DE 
Sbjct: 1001 SISYAVYKPAENRLLVFADDISPRWTTCATMVDYDTCAGGDRFGNVW-VNRIPKTVSDEV 1059

Query: 947  -----------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
                       E+G       +++ +  +HL +        SLV        G    +++
Sbjct: 1060 DDDPTGAGIMHEKGYLMGAPHKVKNLVHFHLNDIPTSMEKTSLV-------PGGREVLLY 1112

Query: 989  GTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
              + G +G+ I  L  E   F + L+ ++R  +  + G +H  +R +         KN +
Sbjct: 1113 TGLQGTVGILIPFLSKEDVDFFQTLEMHMRSELPSLVGRDHLAYRGY-----YFPVKNCV 1167

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGD+ ESF  L  ++  +++  ++ SV ++ K++E +
Sbjct: 1168 DGDMCESFALLPMSKQQQVAAELDRSVSDVLKKIEAV 1204


>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
          Length = 1175

 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 207/902 (22%), Positives = 375/902 (41%), Gaps = 119/902 (13%)

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L+    G ++ + +T+E+  V  +         ++ ++  L +  +++ S +G+  L + 
Sbjct: 302  LIQSEFGDVYKVELTYEEGVVKEIVCRYFDTVPVSVSLCILRSGYLFVASEFGNHHLYQF 361

Query: 329  -------------NLQPDAKGSYV----------EVLERYVNLGPIVDFCVVDLERQGQG 365
                         +L P  + + +          ++++   +L  I D  V D++  GQ 
Sbjct: 362  TGLGTDERDPLCTSLHPHGRSAIIAFKPRALQNLQLVDELSSLSAITDMKVADIQGLGQH 421

Query: 366  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISE 424
            Q+    G     SLR++R GI I   AS EL G  K +W++RSS +  +D F++V F  E
Sbjct: 422  QIFLGCGRGSRSSLRVLRYGIAIEGLASSELPGRPKSVWTVRSSFESAYDGFIIVGF--E 479

Query: 425  TRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
               L +++ + +EE     F +   TL          +QV    +R V     +   EW+
Sbjct: 480  GNTLVLSVGEAVEEVTDSCFLTSITTLHVALMGDGSFIQVHDAGIRHVYD---QRVKEWR 536

Query: 485  SPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINPIGEN 543
            +P    V VA +N  QV+L   GG ++Y EI D G L E     L  EISCLD+ P  + 
Sbjct: 537  APSSKRVKVAASNDRQVILGLSGGDVIYFEIDDSGNLVEYAKKSLSVEISCLDLQPTPKG 596

Query: 544  PSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF----EGISYLLC 598
               +   A+G   D SVR+ +L   L +++ + L     P SV +  F      + YL  
Sbjct: 597  RILANFMAIGTL-DNSVRVLTLDKSLKVVSTQILSNNSTPESVCISEFAVGDSSLVYLHV 655

Query: 599  ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 658
             L  G +L   ++  +G L+D++   LG + +  R  S  ++  + A SD+P +IY+   
Sbjct: 656  GLNTGVMLRSTVDPISGALSDQESRFLGGRAVKFRRVSLGSSFAIVALSDKPWLIYTHRG 715

Query: 659  KLLYSNVNLKE-------VSHMCPFNSAAF---------------------------PDS 684
             LL S +N+         +S +CP    A                            P  
Sbjct: 716  ILLVSPINVGTLESADSLISPICPDGFVAVSGNTLRIFRCTSLGETFAESQLPLTYTPRK 775

Query: 685  LAIAKEGELTIGTIDDI--------------QKLHIRSIPLG-EHPRRICHQEQSRTFAI 729
            L +      ++G+++ +              Q L I+++  G E P   C       F  
Sbjct: 776  LVLMPSEAPSVGSLNYMLAIVESDHARYNEDQSLEIKNVHAGIELPSDYCESLDYTDFKA 835

Query: 730  CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA 789
               K  SC        +R+++  T E ++    +T E   ++ +     D      VGTA
Sbjct: 836  EPGKWGSC--------LRIVNPLTLETVAKLLFETDE--AAMCAQVVVLDGIQCLVVGTA 885

Query: 790  YVLPEENEP--TKGRILVFIV-EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 846
              +  + +P    G + V+    + +++L+      G   +L  + GKL+ A+  +++LY
Sbjct: 886  IGMNLKGDPDSVSGYLRVYAYGANYEIRLLHATPITGVPRALAGYEGKLICALGSRLRLY 945

Query: 847  KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL---IYKHEEGAIEE 903
                R    +     C  HG I   ++   G  I  GD+ +   LL    Y  +    E 
Sbjct: 946  ALGKRQLLLKAEHRTCTDHGFI---WISVCGSRIFAGDIREGFQLLRLRFYAEDAAEFEW 1002

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFV 963
                    W+S  E LD    +G +   +LF  R   E  T  +  + E   ++HLG+  
Sbjct: 1003 IGHSTGPRWLSCCEQLDYHTVIGGDKFDSLFIARVPQEEFT--KATQFENHAQFHLGDL- 1059

Query: 964  NRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKG 1022
                  + + ++  +++ Q P VI+ T+ G IG      ++  L  ++ L+  +      
Sbjct: 1060 -----PTAISKVSFNNMSQ-PIVIYSTILGSIGAFIPYANKDELDLMQHLEMIMANEHPP 1113

Query: 1023 VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE 1082
            + G  H  +RS+         +N +DGDL E    L      +I+  ++ +V  L ++V+
Sbjct: 1114 LCGREHAFFRSY-----YYPVQNIVDGDLCEQVKTLPEAVQRKIATQLDTNVHTLLRKVD 1168

Query: 1083 EL 1084
            ++
Sbjct: 1169 DV 1170



 Score = 47.8 bits (112), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 7/129 (5%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG---LQPMLDVPIYGRI 62
           Y +T  +PT +T +  G+F++P+   +++A+   +E  LL+P     LQ +    ++G +
Sbjct: 5   YHLTLKRPTGITQAVQGSFSAPKAQEIVVARSHILE--LLSPDSNGKLQSICVCDVFGIV 62

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121
            T+  F   G  +D+L + ++  +  VL++ A S     R   +   + G R    GQ  
Sbjct: 63  RTMSTFCLTGTQRDYLVVGSDSGRLVVLEFCAVSRSF-KRIHCETFGKTGIRRIVPGQYL 121

Query: 122 IIDPDCRLI 130
            +DP  R +
Sbjct: 122 AVDPKGRAV 130


>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
 gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
          Length = 1181

 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 280/1223 (22%), Positives = 502/1223 (41%), Gaps = 193/1223 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
            S++ Y +T   PT +T + +G F+  +E  ++ A   ++ IH   P QG +Q +    ++
Sbjct: 6    SMFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGAKLAIHRTEPSQGKVQTLFSQDVF 65

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G  +D++ I ++  +  ++++   +     R   +   + G R    G
Sbjct: 66   GIIRSLAAFRLAGSNKDYIIIGSDSGRITIVEY-VPAQNRFNRIHLETFGKSGIRRVVPG 124

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
            Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125  QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYE 184

Query: 169  --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
              ++   +     + QD     +  T      YE+ L     V   W+ + +D  A +L 
Sbjct: 185  NPIFAALEVEYTEVDQDPTGQAYDDTEKMLVYYELDLGLNHVVRR-WA-DPVDRTASMLF 242

Query: 221  PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
             VP       GVL+  E+ IVY  +N  AF+  IP R  P+      R    G       
Sbjct: 243  QVPGGADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENPERKRCITAGVMHKMRG 302

Query: 268  ---YLLGDHAGLLH---LLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
               +LL    G L    + ++  E E  TG    LK++      +AS++  L +  +++ 
Sbjct: 303  AFFFLLQSEDGDLFKVTMEMVEDENENATGEVKRLKLKYFDTVPLASSLCILKSGFLFVA 362

Query: 318  SSYGD-----------------------SQLIKLNLQP----DAKGSYVEVLERYVNLGP 350
            S  G+                       S +I   L P          + ++E   +L P
Sbjct: 363  SETGNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNP 422

Query: 351  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
            ++   V ++  +   Q+ T  G     S R +++G+ ++E    EL  +   +W+ + S 
Sbjct: 423  LMAASVTNVTEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSR 482

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +D +D ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483  NDQYDAYIVLSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
            R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541  RHIHADQR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQ 598

Query: 528  LEYEISCLDINPIGENPS----YSQIAAVGMWTD-ISVRIFSLPDLNLITKEHLGGEIIP 582
            +   ++CL    +GE P     +  +  +    D  ++R+    D+ L    H+G     
Sbjct: 599  MSGTVTCLS---LGEVPKDDVDFCPVCPIHHVHDRFTLRV----DVIL----HIG----- 642

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
                             L  G  L  +L+  TGEL+D +   LG +P+ L + S K    
Sbjct: 643  -----------------LYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 685

Query: 643  VFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            V A S R  + YS    K    + +N   +     F+S    + +   +   L I +I+ 
Sbjct: 686  VLALSSRSWLGYSDLQTKSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEK 745

Query: 701  I-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF-------------- 745
            +   L    IPL   PR      +   F +    N   +  ++                 
Sbjct: 746  LDNNLLQEPIPLAYTPRNFVRHPEYPLFYVIGSDNNVLSPSTKAKLLGESTAVNGDSAEL 805

Query: 746  -----------------VRLLDD-QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCV 786
                             + ++D   T   +S   L+  E   SI + SF S +   +  V
Sbjct: 806  PPEDFGYPRGTNHWASCIEVVDPINTKSVLSKLELEDNEAAVSIAAVSFTSQEDETFLVV 865

Query: 787  GTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            GT   ++      T G I ++   E+GK L+ I + + +    +L  F G+LLA +   +
Sbjct: 866  GTGKDMVVSPRTYTCGFIHIYRFQEEGKELEFIHKTKVEQPPLALLGFQGRLLAGVGPDL 925

Query: 844  QLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 902
            ++Y     D G R+L  +C       + + +QT+G  I+V D+ +S++ ++YK++E A+ 
Sbjct: 926  RIY-----DLGMRQLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENALI 980

Query: 903  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHL 959
              A D  + W +   ++D +   G +   N++ +R   K SE A ++  G   +    +L
Sbjct: 981  PFADDIISRWTTCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQYL 1040

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNGVIGV-IASLPHE 1004
                NR    SLV+     D   IPT I  T              + G +G+ +  +  +
Sbjct: 1041 QGAPNRL---SLVVHFYSQD---IPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRD 1094

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
               F + L+  L      + G +H  +R +         K  +DGDL E+FL L   +  
Sbjct: 1095 DVDFFQTLEMQLASQNAPLAGRDHLIYRGY-----YAPCKGVIDGDLCETFLLLPNDKKQ 1149

Query: 1065 EISKTMNVSVEELCKRVEELTRL 1087
             I+  ++ SV E+ +++   T L
Sbjct: 1150 AIAGELDRSVREIERKISVRTIL 1172


>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1172

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 261/1177 (22%), Positives = 476/1177 (40%), Gaps = 184/1177 (15%)

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
            I+G I  L  FR  G  +D+L ++T+  +  +LQ+D  +++L    M        R    
Sbjct: 24   IFGLIRDLRAFRLTGGTKDYLIVSTDSGRITILQYDVTANKLERVHMETFGKSGCRRIVP 83

Query: 118  GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL-------DIKF 168
            GQ    DP  R  ++G      L  ++  D   +L  +  +   +   L       D+ F
Sbjct: 84   GQYLATDPKGRAVMVGAVEKQKLVYILNRDAAARLTISSPLEAHKGHSLVYDMVGVDVGF 143

Query: 169  ---LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNN--------LDNGAD 217
               L+ C    + + Y+D  +    +  E+  +   F E     N+        LD+ A+
Sbjct: 144  ENPLFAC----LELDYEDVDEDPSGEALELLAQTLVFYELDLGLNHVVRKESIELDSFAN 199

Query: 218  LLIPVPPPL---CGVLIIGEETIVYCSANAFKAIPI------------RPSITKAYGRVD 262
             LIPVP       GVL+ G+  I + +      I +            R +I  A+    
Sbjct: 200  KLIPVPGGADGPSGVLVCGDGQITWRTVGEHTPISVSIPRRLDPFRQPRSTIINAFCMHK 259

Query: 263  ADGSRY-LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
               + + LL    G L  L + H++++V G+ ++      +A ++  L   +++I S +G
Sbjct: 260  TKKTFFFLLQTEEGDLFKLTMVHDEDEVQGMILKYFDTVPVAKSMVLLKIGLLFIASEHG 319

Query: 322  DSQLIK-------------LNLQPDAKGSY--------VEVLERYVNLGPIVDFCVVDLE 360
            D QL +             L+ +P+ K  Y        +  L+   +L P++D  + D  
Sbjct: 320  DHQLYQIAQLGDNKDEPSFLSTEPEDKVLYFRPRPLLNLAPLDVIESLAPVMDCQLADAG 379

Query: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
            +Q   Q+    G     SLR++R+G+ ++  A   L G    +WS++   +D  DT++V+
Sbjct: 380  QQDGPQLYALCGRGSGSSLRVLRHGLEVSAMAESPLPGNPSAVWSVKRHVEDEADTYIVM 439

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            SF+  T +L +   + +EE    GF     TL       + L+Q+ +  +R +    R  
Sbjct: 440  SFVDATLVLGIG--ETVEEVTDSGFLGSVATLSASRIGDDALLQIHAMGIRHILHDGR-- 495

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDI 537
             NEWK+P    ++    N  Q ++A   G LVY E+   G L E  +  ++  +++ L +
Sbjct: 496  INEWKAPDRTKISHCAVNERQAVVALSNGELVYFELDRSGQLIEHSERVEMSSQVTALAL 555

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL-LCAFE----- 591
             PI E    ++  A+G+  D +VR+ SL   + +    L  + +P +   LC  E     
Sbjct: 556  APIPEGAQTARFLALGL-DDQTVRLMSLDKSDCLAP--LSMQALPGAAASLCMVEVRGTH 612

Query: 592  ----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
                G+S L   LG+G L+   ++  T +L+D +   LG + + L          V A S
Sbjct: 613  GEPSGLS-LAIGLGNGVLMRSRVDTLTADLSDTRTRYLGARAVKLFPVKVAEEPAVLALS 671

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHI 706
             +P + Y        + ++   + +   F+S   P+ +A      L I   + + Q  H 
Sbjct: 672  TKPWLSYRYQGHSRITPLSYDALEYASAFSSDQCPEGVAAVAGNTLRIFAFEKLGQVFHQ 731

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQSC----------------------AEESEMH 744
             SIPL    RR+    ++ + A  +  +Q C                      AE+++  
Sbjct: 732  NSIPLEYTGRRLLLDPEA-SLAFIAEGDQGCLSVTAKAERLSRIASHQAGTAMAEQTDPQ 790

Query: 745  --------FVRLLDDQTF----------------------EFISTYPLDTFEYGCSILSC 774
                        LD + F                      E     PL   E   S+   
Sbjct: 791  EDLTSPAALAEPLDVKQFGQSYAGDNLWASNIRVVNLAQGETTCLVPLAQDEMVMSLARV 850

Query: 775  SFSDDSNVYYCVGTAYV--LPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV-YSLNAF 831
             F+   N  + V        P++       +L F V+  ++ L+      G +  +L  F
Sbjct: 851  RFASSPNDKHIVAGVVKGWKPKQQSMDGAFLLTFQVQGDQVVLLHRTAVDGGLPCALAEF 910

Query: 832  NGKLLAAINQKIQLYKWMLRDDG----TRELQSECGHHGHILALYVQTRGDFIVVGDLMK 887
             GK+LA +   ++++    +        R+L S+  H        + T G  I   D   
Sbjct: 911  AGKVLAGVGNTLRIFDLGKKKLLLKTENRQLPSQVVH--------ITTMGTRICAADQKH 962

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE- 946
            S   L YK  E A+   A D N  W +   +LD     GA + F  F V +     TD+ 
Sbjct: 963  SFVWLKYKPAENALTIFADDTNPRWCTRGVLLDYQTVAGA-DKFGNFVVARLGTDLTDQI 1021

Query: 947  -----------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
                        RG       +++++  YH+GE +   +  +LV        G    +++
Sbjct: 1022 DDDPTGSKAFWSRGILNGASQKMDILCNYHVGETILSLQKVTLV-------PGGAECILY 1074

Query: 989  GTVNGVIGVIASLPH-EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
             T++G IG+     + + + F   L+ +LR+    + G +H  +RS     K+V     +
Sbjct: 1075 TTMSGGIGLFLPFSNRDDFEFFTSLELHLRQEHAPLCGRDHLHYRSAYFPVKSV-----I 1129

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E +  LS +  +E+++ +     ++ K++E++
Sbjct: 1130 DGDLCEQYPLLSASVKNEVAEGLERPTTDVIKKIEDI 1166


>gi|300120114|emb|CBK19668.2| unnamed protein product [Blastocystis hominis]
          Length = 1240

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 278/1224 (22%), Positives = 493/1224 (40%), Gaps = 174/1224 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
            Y +T HK ++V     GNF+S +    +I++   IE+      G +  +    +YG I  
Sbjct: 4    YNLTLHKASSVQRVIYGNFSSAKVEEFVISRGNIIELWRPDDNGNINVICSFEVYGLIRA 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQIG 121
            L+ FR  G   DF+ I ++  +  VL++D E +   ++     G V    G P   GQ  
Sbjct: 64   LKPFRLSGNNTDFVLIGSDSGRIVVLKYDTEKNTFEKIHQETFGKVGVIRGLP---GQYL 120

Query: 122  IIDPDCR--LIGLHLY----------DGLFKVIPFDNKGQLKEAFNIRLEELQ--VLDIK 167
             +DP+ R  +I   L+            L  V+  D++G +  +  +   + Q  VL  +
Sbjct: 121  AVDPNGRAFMISGFLFHVSSLGAIEKQNLVYVLNRDSRGNVTISSPLEAHKSQTIVLTTE 180

Query: 168  FL-YGCAKPTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDN 214
             L  G   P    L  +  +A    T E A + +            + V   WS+  ++ 
Sbjct: 181  GLDVGYDNPMFACLELNYGEADEDSTGEAAQQTEKVLTYYQLDLGLNHVIRKWSK-TVER 239

Query: 215  GADLLIPVP--PPLCGVLIIGEETIVYCSANAFK---AIPIRPSITKAYGRVDADGSR-- 267
             A+LL  VP      GVL+  E  ++YC+ N  +    IP R  + +  G +    +   
Sbjct: 240  SANLLARVPGDSGPGGVLVFAENWVMYCNENHPEIRAPIPRREFLPENRGTMIITAALFQ 299

Query: 268  ------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
                  YL+    G L+ + ++ +   V  L ++       A+T+       +   S  G
Sbjct: 300  REGNLFYLVQSEYGDLYKITLSFDSSHVHDLVVKYFDTIPAATTLHITKKGFLLATSEVG 359

Query: 322  DS--------------QLIKLNLQPDAKGSYVEVLE------------------RYVN-- 347
            D               Q I L     A+ S++  L+                  R V+  
Sbjct: 360  DQYALPLALLTGSCFYQFIALGDDDSAQASFLGSLQPDGSVQVPVFSPRALTNLRPVDTL 419

Query: 348  --LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ-GIKGMWS 404
              L P+V     DL   G  Q+    G      L++++ G+ I+  +   L     G+W+
Sbjct: 420  PSLSPLVKIHAEDLRGDGTPQLFALCGRSSRSQLKVLQQGLAISLLSQNPLPYAPSGLWT 479

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
            LR +       F+V+SF + T +LA+     +E+    GF     TL       N  +QV
Sbjct: 480  LRDARTGQ-HRFMVISFNNATIVLAVG--KSVEQVMDTGFKLDESTLATGVLEGNSFLQV 536

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVK 524
              G  R +          W+ P   S+  A  N  Q+++A   G ++Y E+ D  L  V+
Sbjct: 537  YPGGFRQIFEDGHT--KVWEPPSRRSITAAAMNLRQIVVALSNGEVLYFEL-DERLEWVE 593

Query: 525  HAQLEY--EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EII 581
               + +  E+ CLD+  +  N   +   AVG + D S R++SL   +L+ +  +     +
Sbjct: 594  RESMNHREEVICLDLPALAPNSLRAPFLAVG-YGDRSCRVYSLAPNSLLEELSMQALNAM 652

Query: 582  PRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTD-RKKVSLGTQPITL 632
            P ++ L      S         L   + +G L+   ++  +G+L++ R    LG +P+ L
Sbjct: 653  PSNLTLDTMRMGSGSLARETLLLTVGMENGILMRVEVDPVSGKLSNARSTRFLGPRPVRL 712

Query: 633  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
                +     V A S +P + Y +N  L  +++    +    PF +    + +       
Sbjct: 713  FKILAGGNPCVLALSVKPWLCYCANNTLTLTSLVSDPLDLAAPFCNEDCSEGIVCVAGTN 772

Query: 693  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTF-------AICSLKNQSCAEESEM 743
            L I  IDD+ Q     SIPL   PR  + +  Q R         A   L+ QS  ++  +
Sbjct: 773  LNIIRIDDLTQPFTATSIPLSYTPRELVVYPGQPRLLLLETDHNAYSELEKQSFYQQHNV 832

Query: 744  HFV--------------------RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-V 782
             +V                    R++D  + + +    L   E   S+  C F+   +  
Sbjct: 833  SYVNEYDCGAPIPAEPDKWASCIRVVDAISLQTLERLELADNEAAFSMCVCRFASKGDEP 892

Query: 783  YYCVGTAYVLP-EENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            +  +GTA  L       ++G I VF  VE   LQL+   E      +L  F+GKL A I 
Sbjct: 893  FVVIGTAKNLKIHPRSCSQGFISVFRFVEGHSLQLLHRTEVDEVPAALCEFDGKLAAGIG 952

Query: 841  QKIQLYKWMLRDDGTRELQSECGHHG--HILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            + +++Y     D G ++L  +C +    H +   ++  G+ +  GDL  ++S + ++   
Sbjct: 953  RSVRVY-----DLGKKKLLRKCENKAMPHFVT-KLRAMGERLYAGDLTDNVSFVKFRKGT 1006

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE----------------- 941
              + E A       ++A+++LD +  +  +   NLF  R + +                 
Sbjct: 1007 NQLVEFADGGIPRSITALDVLDYNTVVCGDKGGNLFVERVDPKVDDDIANPTGSRSLWNS 1066

Query: 942  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 1001
            G       + E     +LGE V   +   L+   P  D      V++GT+ G IG +  +
Sbjct: 1067 GLLSAAPNKAEQAASIYLGEIVTSVQKTVLI---PGGD----EVVLYGTIFGTIGALLPM 1119

Query: 1002 PHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 1060
            P    L  L  ++  +RK    + G +   WRS          K  +DG+L E+F  L +
Sbjct: 1120 PSRDDLHHLMHIEMYIRKQEPSLVGRDILSWRS-----AYTPMKGIIDGNLCETFSMLPQ 1174

Query: 1061 TRMDEISKTMNVSVEELCKRVEEL 1084
             + +EI+  + +SV  + K++E+L
Sbjct: 1175 IKQEEIANALVLSVSSIVKKMEDL 1198


>gi|260819270|ref|XP_002604960.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
 gi|229290289|gb|EEN60970.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
          Length = 1049

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 243/1059 (22%), Positives = 436/1059 (41%), Gaps = 164/1059 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + T VTH+  GNF+  ++  +I ++   +E+    P    +  +L V I+G I 
Sbjct: 4    YALTLQRATGVTHAIHGNFSGTRQQEIITSRGKILELMRPDPNTGKIHTLLSVEIFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G  +D++   T+  +  +L++    ++              R    GQ   +
Sbjct: 64   SLMSFRLTGGTKDYIVCGTDSGRIVILEYLPAKNKFDKVHQETFGKSGCRRIVPGQYLAV 123

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
            DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G   P   
Sbjct: 124  DPKGRALMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLCYHLVGVDIGFENPMFA 183

Query: 179  VLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP---P 224
             L  D +DA +  T E +   +    F E     N+        L+   + LI VP    
Sbjct: 184  CLEIDYEDADNDPTGESSQSTQQCLTFYELDLGLNHVVRKYSEPLEEHGNFLIAVPGGSE 243

Query: 225  PLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------------- 267
               GVLI  E  I Y   N      IR  I +    +D D  R                 
Sbjct: 244  GPSGVLICSENYITY--KNFGDQPDIRSPIPRRRNDLD-DPERGMIFVCSATHKTKSMFF 300

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +G+  L +
Sbjct: 301  FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQ 360

Query: 328  L------NLQPDAKGSY-----------------VEVLERYVNLGPIVDFCVVDLERQGQ 364
            +      + +P+   +                  + +++   +L PI+   + DL  +  
Sbjct: 361  IAHLGDDDEEPEFSSAMPLEEGDTFLFTPRGLKNLVLVDEMDSLSPIMSCQIADLANEDT 420

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFIS 423
             Q+   +G     S R++R+G+ ++E A  EL G    +W+++ + DD FD ++VVSF++
Sbjct: 421  PQLYVANGRGPRSSFRVLRHGLEVSEMAVSELPGNPNAVWTVKKNVDDEFDAYIVVSFVN 480

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
             T +L++   + +EE    GF   T TL C     + L+Q+    +R + S  R   NEW
Sbjct: 481  ATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLIGEDALLQIYPEGIRHIRSDKR--VNEW 536

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDIN--P 539
            ++P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +   P
Sbjct: 537  RTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSAEVICMALANVP 596

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLI----------TKEHL------GGEII-- 581
            +GE     +  AVG+ TD +VRI SL   + +          T E L      GGE I  
Sbjct: 597  VGEQ--RCRFLAVGL-TDDTVRIISLDPADCLQPLSMQALPATPESLCILQMGGGEGIDD 653

Query: 582  --PRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
              PR+ +L       +L   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 654  TGPRNTML-------FLNIGLQNGVLLRTVLDQITGDLSDTRTRYLGSRPVKLFQVKMQG 706

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S R  + Y+   +   + ++ + + +   F S   P+ +       L I  ++
Sbjct: 707  NEAVLAMSSRSWLSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISANTLRILALE 766

Query: 700  DIQKLHIR-SIPLGEHPRRICHQEQSR------------TFAICSLKNQSCAEE------ 740
             +  +  + S PL   PR+     QS             T A  + + Q  AEE      
Sbjct: 767  KLGAVFNQISTPLMYTPRKFVIDTQSNNIIMIETDHNSYTEATKAQRKQQMAEEMVEAAG 826

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYG 768
                   +EM                           +R+L+      +    L+  E  
Sbjct: 827  EEEKELAAEMAAAFINENLPEATFGSPKAGPGMWASVIRVLNPIQGNTLDLIQLEQNEAA 886

Query: 769  CSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRIL--VFIVEDG-KLQLIAEKETKGA 824
             SI  C F++   + +  VGTA  +        G  L    +V +G KL+LI +   +  
Sbjct: 887  FSIAICKFANRGEDTFVVVGTAKDMTMNPRTCSGGFLHTYQLVNNGEKLELIHKTPVEDV 946

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVG 883
              ++++F G++L  I + +++Y     D G ++L  +C   H     + + T G  I V 
Sbjct: 947  PGAISSFQGRILVGIGRLLRIY-----DLGKKKLLRKCENKHVPNFIMSIHTMGHRIFVS 1001

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 922
            D+ +S   + YK +E  +   + D N  W++    LD D
Sbjct: 1002 DVQESFHFIRYKRQENQLIIFSDDTNYRWITCSTQLDYD 1040


>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
          Length = 1034

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 245/1000 (24%), Positives = 426/1000 (42%), Gaps = 148/1000 (14%)

Query: 207  WSQNNLDNGADLLIPVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAY 258
            W+ + +D  + +L  VP       GVL+  E+++ Y  +N  AF+  IP R  P+     
Sbjct: 55   WA-DPVDRTSSMLFQVPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGPTENPER 113

Query: 259  GRVDADGSR--------YLLGDHAGLLHLL---VITHEKEKVTG----LKIELLGETSIA 303
             R    G          +LL    G L  L   ++  +  ++TG    LKI+      +A
Sbjct: 114  KRFITAGVMHKMRGAFFFLLQTEDGDLFKLNIDMVEDDNGQLTGEVKRLKIKYFDTVPVA 173

Query: 304  STISYLDNAVVYIGSSYGDSQLIKL---------------NLQPDAK------------G 336
            S++  L +  +Y+ S  G+    +                N   D               
Sbjct: 174  SSLLILKSGFLYVASEAGNHHFYQFEKLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSA 233

Query: 337  SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL 396
              + ++E   +L P++D  V +L  +   Q+ T SG     + R +++G+ ++E    EL
Sbjct: 234  ENLNLVETINSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSEL 293

Query: 397  QGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 455
              +   +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL    
Sbjct: 294  PSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQ 351

Query: 456  AIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 515
               + L+Q+    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+
Sbjct: 352  LGEDSLIQIHPRGIRHIMADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEM 409

Query: 516  -GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLIT 572
              DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  
Sbjct: 410  DADGTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLEN 468

Query: 573  KEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 626
            K        P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG
Sbjct: 469  KSVQALTAAPSALNIMSMSDSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLG 528

Query: 627  TQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
            ++P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + 
Sbjct: 529  SKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEG 588

Query: 685  LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICS----LKNQSCA 738
            +   +   L I +I+ +   +  +SI L   PRR   H EQ   + I S    L   + A
Sbjct: 589  MVGIQGQNLRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQPLFYVIESDNNVLSPSTRA 648

Query: 739  EESEMHFVRLLDDQTF---EF------------------------ISTYPLDTFEYGCSI 771
            +  E    R  D+      EF                        +ST  L+  E   S+
Sbjct: 649  KLLEDSKARTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHAKAVVSTIELEENEAAVSV 708

Query: 772  LSCSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVY 826
             +  F S D   +  VGTA  +   N P+   G I ++   EDG+ L+ I + + +    
Sbjct: 709  AAVPFTSQDDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQEDGRELEFIHKTKVEEPPL 767

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVG 883
            +L  F G+L+A I   +++Y     D G ++L  +C        I+ L  QT+G  IVV 
Sbjct: 768  ALLGFQGRLVAGIGPMLRIY-----DLGMKQLLRKCNAQVVPKTIVGL--QTQGSRIVVS 820

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNS 940
            D+ +S++ ++YK++E  +     D  + W ++  ++D +   G +   N++ +R   K S
Sbjct: 821  DVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDKFGNIWMLRCPKKIS 880

Query: 941  EGATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
            E A ++        ERG       RLE++   +  +         LV        G    
Sbjct: 881  EQADEDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLHKTQLV-------AGGRDI 933

Query: 986  VIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 1044
            +++   +G IG++   +  E   F + L+  L      + G +H  +RS+    K V   
Sbjct: 934  LVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGRDHLIYRSYYAPVKGV--- 990

Query: 1045 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              +DGDL E++  L       I+  ++ SV E+ +++ ++
Sbjct: 991  --IDGDLCETYFLLPNDTKMMIAAELDRSVREIERKISDM 1028


>gi|406602265|emb|CCH46158.1| Pre-mRNA-splicing factor [Wickerhamomyces ciferrii]
          Length = 1123

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 268/1174 (22%), Positives = 487/1174 (41%), Gaps = 160/1174 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHL--LTPQGLQPMLDVPIYGRIA 63
            Y +T  + +N   SCVGNF+  +   +I A    + ++   +    L  +L+V I+  I 
Sbjct: 10   YNLTLQRQSNSLKSCVGNFSGKKTQEIITATSNSLIVYKPNVETGKLVNLLNVQIFAIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            ++E F+  G  +D+L I ++   F +L+ D  + +  T           R    GQ   +
Sbjct: 70   SMENFKIAGSGKDYLAITSDSGNFSILELDLNNGKFNTLFNEPYHKSGIRRLSPGQDLAV 129

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE---------------LQVLDIKF 168
            DP  R I       L   I    K +L   FN  L+                L +  I  
Sbjct: 130  DPKGRAI-------LATAIE---KNKLCYVFNRDLDNNLTISSPLEANRSKILTLTSIGL 179

Query: 169  LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNL--------DNGADLLI 220
              G   P    +  D  +  +++      +   F E     N++         + ++LL+
Sbjct: 180  DVGYENPVFATIEIDYSNYEYIENLTEVERFLTFYELDLGLNHIVRRKTEKIHDSSNLLL 239

Query: 221  PVP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAG 275
             VP     P   GVL+  +  I Y +    K     P +  +     ++   +++   AG
Sbjct: 240  QVPGGNDGP--SGVLVCSKNLISYRNLIGDKVSINIPKLENS-----SNQDSFIV---AG 289

Query: 276  LLH-------LLVITHEKEKVTGLKIELLGETSI----------ASTISYLDNAVVYIGS 318
            ++H        +V T+  +     KIELL E SI          AS+I  L +  +Y  S
Sbjct: 290  VVHKMKNQFFFIVQTNHGDL---FKIELLEEGSITISYFDTIPLASSIIILRSGFLYCDS 346

Query: 319  SYG------------DSQLIKLNLQPDAKGSYVEVLERYVNL--------GPIVDFCVVD 358
             YG            +S  I  N +P  + ++    E    L         P++D  +V+
Sbjct: 347  EYGSKFFYQFEKLGSESPFISSNDEPIEELTFERTEELDNLLLVDVLDSLNPLIDSKLVN 406

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG-MWSLRSSTDDPFDTFL 417
                   ++ + SG     SL+I++ G+ INE    +L GI   +W+ + + +D FD +L
Sbjct: 407  --DDAFTKIYSLSGVKDSSSLKILQYGLSINEIVESDLPGIANKVWTTKLNKNDEFDKYL 464

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            V+SF+  T +L++   + +EE    G     +T+       N LVQ+ S  +R + +   
Sbjct: 465  VISFMDTTLVLSIG--ENVEEITDSGLALNEETIGIQQIGINSLVQIHSNGIRNIKNG-- 520

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG--ILTEVKHAQLEYEISCL 535
            EL NEW+ P G  +   +    Q+ +      LVY E+ D   ++   +  +L   I  L
Sbjct: 521  ELINEWQPPAGIKILTTSTTNRQIAIGLSNDELVYFEVDDRDRLIEYNERKELTSRIVSL 580

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSL---PDLNLITKEHLGGEIIPRSVLLCAFEG 592
             +  I E    S    VG   D ++R+ S      L L++ + L    IP  +L  +   
Sbjct: 581  SLGDIPEGRLRSPFLIVG-CQDSTIRVLSTDPGSTLELLSLQALSS--IPFDILTLSMNN 637

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
              ++   L +G  +  L++ + G+L+D +   LG +P++L   S      V A S++  +
Sbjct: 638  QLFVNIGLENGVYVRTLIDEQNGQLSDTRIKYLGNKPVSLSKISISGVNVVLAFSNKTWI 697

Query: 653  IY-SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK-LHIRSIP 710
            ++ + N     +++ +  +     FNS    D +    +  L I TIDD+    +I SI 
Sbjct: 698  VHETKNSTFKINSLLINPLKFGFMFNSEDCIDGIVGVYKKNLIIFTIDDLDNDFNINSIQ 757

Query: 711  LGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCS 770
            L   P+ +    Q     I   +N S      + F+   D Q  E   +  L   E   +
Sbjct: 758  LKTTPKNLLKNNQD----IFITQNSSS-----LGFIEKFD-QELELNKSIQLSESETIIT 807

Query: 771  ILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI-VEDGKLQLIAEKETKGAVYSLN 829
                 F   S  Y  V  +       +   G    FI   D +L LI   +     Y++ 
Sbjct: 808  STIVKFESKSTSYLLVSIS------KKHDNGSNEFFINTYDLELNLIHITKISDIAYAIT 861

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA--LYVQTRGDFIVVGDLMK 887
             F GK+L  I+  ++L+     D G ++L S+       ++  + ++T+G  +VVGD+ +
Sbjct: 862  EFQGKVLIGISNHLRLF-----DMGLKQLLSKANSKIDTISKIVKIETQGYRVVVGDIRE 916

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE 947
            SI+ L+YK +         D     ++++++LD +  +G +   NLF +R + E +   +
Sbjct: 917  SITFLVYKPKSNEFLTFTDDILPRHITSIKMLDYNTVIGGDKFGNLFILRASEESSKISD 976

Query: 948  RGRLEVVGEYHLGEFVNRFRHGS--LVMRLPDSDVGQIPT--------------VIFGTV 991
                 ++ +       ++F +G+   +M L +  +  IPT              +I+  +
Sbjct: 977  TNSTFLITK-------DKFLNGAPFKLMNLCNFFIEDIPTSFAKGSFTIGGKDLIIYTGL 1029

Query: 992  NGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 1050
             G +G +I  L      F   L+  +R     + G  + ++R +         KN +DGD
Sbjct: 1030 QGTVGALIPLLTKSDIKFFINLEKQMRLHKPDLLGRMNLKYRGYYQP-----VKNVIDGD 1084

Query: 1051 LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            LIE F  LS +   EIS  ++ +  E+ K+++E+
Sbjct: 1085 LIELFNTLSESTKVEISNELDKTPREISKKIDEI 1118


>gi|154295205|ref|XP_001548039.1| pre-mRNA splicing factor 3b [Botryotinia fuckeliana B05.10]
          Length = 1020

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 240/1001 (23%), Positives = 419/1001 (41%), Gaps = 139/1001 (13%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 63
           Y +T + PT +T + +G F   +E  ++ A  +R+ +H   P QG +   L   ++G I 
Sbjct: 10  YSLTINPPTAITQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIITALSHDVFGIIR 69

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +  FR  G  +D++ I ++  +  ++++    ++     +        R    GQ   +
Sbjct: 70  AIAAFRLAGSNKDYIIITSDSGRITIVEFVPAQNKFNRLHLETFGKSGVRRVVPGQYLAV 129

Query: 124 DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
           DP  R  L      + L  V+  +++ +L  +  +   + Q L    +    G A P   
Sbjct: 130 DPKGRACLTASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALDVGYANPVFA 189

Query: 179 VLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVPPP 225
            L  D  ++    T             YE+ L     V   WS+  +D  A++L  VP  
Sbjct: 190 ALEIDYGESDQDPTGQAYDEIEKQLVYYELDLGLNHVVRK-WSEP-VDRTANILFQVPGG 247

Query: 226 L---CGVLIIGEETIVYCSAN--AFK-AIPIRPSITKAYGRVD--ADGSRYLLGDHAGLL 277
                GVL+ GE+ I Y  +N  AF+ AIP R   T+   R      G  + L   AG  
Sbjct: 248 TDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRRGATEDPQRKRNIVAGVMHKLKGAAGAF 307

Query: 278 HLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
             L+ T + +                  +V  LKI+      +A+++  L +  +++ S 
Sbjct: 308 FFLLQTDDGDLFKITIEMVEDDNGQPTGEVRRLKIKYFDTVPVATSLCILKSGFLFVASE 367

Query: 320 YGDSQLIKLNLQPD---------------AKGSYVEV------------LERYVNLGPIV 352
           +G+ Q  +     D               A  SY  +            +E   ++ P++
Sbjct: 368 FGNHQFYQFEKLGDDDEETEFVSDDFPTGAHESYTPIYFHPRPAENLSLVESIDSMNPLM 427

Query: 353 DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDD 411
           D  V +L  +   Q+ +  G     + R +++G+ ++E    EL G+   +W+ + +  D
Sbjct: 428 DCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWTTKLTRGD 487

Query: 412 PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
            +D ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +R 
Sbjct: 488 TYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRH 545

Query: 472 VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLE 529
           + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  ++ 
Sbjct: 546 IRADHR--VNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMS 603

Query: 530 YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLC 588
             ++CL +  + E    SQ  AVG   D +VRI SL PD  L  K        P ++ + 
Sbjct: 604 GTVTCLSLGEVPEGRQRSQFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSPPNALSIM 662

Query: 589 AFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
           A    S      YL   L  G  L  +L+  TGEL+D +   LG +P+ L   + +  T 
Sbjct: 663 AMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQGQTA 722

Query: 643 VFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
           V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+ 
Sbjct: 723 VLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSIEK 782

Query: 701 I-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF----- 754
           +   L   SIPL   PRR     +   F +    N   +  ++    +LL+D +      
Sbjct: 783 LTDNLLQESIPLTYTPRRFVRHPEHACFYVIEADNNILSPATKQ---KLLEDPSVTNGDA 839

Query: 755 ------EF------------------------ISTYPLDTFEYGCSILSCSF-SDDSNVY 783
                 EF                        +ST  L+  E   SI   +F S +   +
Sbjct: 840 TVLPPEEFGYPRGTNHWASCISVVDPVTEKKVLSTIHLEDNECAVSIAVVAFASQEDETF 899

Query: 784 YCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAIN 840
            CVGT   ++      + G I V+   EDGK L+ I + + +    +L AF G+LLA + 
Sbjct: 900 LCVGTGKDMVVSPRSFSAGFIHVYRFHEDGKELEFIHKTKVEEPPMALLAFQGRLLAGVG 959

Query: 841 QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 881
           + +++Y   +R    R+ QSE   +   + + +QT+G  I+
Sbjct: 960 KDLRIYDLGMR-QLLRKAQSEVAPN---MIVGLQTQGSRII 996


>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
 gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila SB210]
          Length = 1197

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 296/1234 (23%), Positives = 505/1234 (40%), Gaps = 201/1234 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ-----GLQPMLDVPIYG 60
            Y +T  +PT +  +  GNF+ P+   + +AK   +EI  LTP       L+ +    ++G
Sbjct: 5    YSLTLLQPTAILKAVYGNFSGPKAQEIAVAKGKVLEI--LTPDENNSGKLRVVHSEEVFG 62

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
             I T+ +FR HG+ QD++ + ++  +  +L+++ E  E   +   +   + G R    GQ
Sbjct: 63   IIRTINIFRLHGQTQDYIIVGSDSGRIVILKFNKEKGEF-EKVHQETYGKTGCRRIVPGQ 121

Query: 120  IGIIDPD---CRLIGLHLYDGLFKVIPFDNKGQLK-----EA------------FNIRLE 159
               +DP    C    +     ++ ++  DN+ +L      EA             ++  E
Sbjct: 122  YIAVDPKGRACMFAAIEKQKFVY-ILNRDNEDKLTISSPLEAHKSHTLCYDIIGIDVGYE 180

Query: 160  ELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
              Q   I+  YG  +     ++   +  + +  YE+       V+   S   +   A +L
Sbjct: 181  NSQFACIECDYGEVEQKDSAVHT-GQIQKQLTIYELDFGLNHVVKK--SSEPIPETAHML 237

Query: 220  IPVP-----PPLCGVLIIGEETIVYCSANA-FKA-IPIRPSITK----AYGRV-----DA 263
            +PVP     P   GVLI  E+ ++Y   N   K   P R S +K    ++G +     + 
Sbjct: 238  LPVPGLPDGPG--GVLIACEDMLIYKGNNQELKCRYPQRFSTSKIMINSFGFLKQKSKNQ 295

Query: 264  DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
            + S +LL    G L  L I    +KV GL ++       A +I       ++     GD 
Sbjct: 296  NLSFFLLQTELGDLFKLQIKSTDDKVHGLTLQYFDSIPTAISICITKTGHLFAACEKGDH 355

Query: 324  QLIKLNL------QPDAKGSY---------------VEVLERYVNLGPIVDFCVVDLERQ 362
             L +         +P    S                +E ++   NL  I D  V DL  +
Sbjct: 356  LLYRFKSLGEQEERPTKTTSADFEQQAIFIPRKLVNLEQVDSLDNLSAISDIKVNDLTGE 415

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ-GIKGMWSLRSSTDDPFDTFLVVSF 421
            G  Q+     A    +LRI+R+G+ ++E A+  L     G+W+++   D+    ++V+S 
Sbjct: 416  GNPQIYALCAAGSRSTLRILRHGLQVSEYATSRLPLRPNGIWTIKQRHDEGLTKYIVLSS 475

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
              +T +L+  ++D +         + +QTL       N ++QVT  S R +      L  
Sbjct: 476  SKKTYVLS--IKDTISAVNDSSLDTNSQTLHAGILENNCIIQVTPESFRQIRDNRVTL-- 531

Query: 482  EWKSPPGYSVNVATANASQVLLA------TGGGHLVYLE--IGDGILTEVKHAQLEYEIS 533
             +K+     V  A +N+ Q+ LA        GG ++Y E  +G  +    + A+L  +I 
Sbjct: 532  -YKTESNKFVK-ACSNSRQIALALQGGQGQPGGDIIYFEFDLGGQLKRIEEKAKLTSDIE 589

Query: 534  CLDIN--PIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLC 588
            C+DI   PIG  P + +  AVG   D +VRI SL     L  ++ + L G  IP SV L 
Sbjct: 590  CIDIGEVPIGR-PKF-KFLAVG-CKDQTVRILSLEQDQYLQRLSLQALPG--IPESVSLI 644

Query: 589  -----------AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
                       A E   YL   L +G LL   ++  TG L+D +   L   PI    +  
Sbjct: 645  EMKRGTGTEQEAEEYQLYLFVGLQNGILLRATVDQVTGSLSDVRTRVLSAAPIRTCKYVV 704

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP--FNSAAFPDSLAIAKEGELTI 695
            +    + A S RP + Y+   K     ++   + +  P  FN         ++  GE   
Sbjct: 705  QGQPALLALSTRPWICYTYLGKYQMVPISYDMLEYAAPAVFNMQGEQKQCIVSTSGESV- 763

Query: 696  GTIDDIQK----LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF------ 745
              I + QK    L+ + I L   PR++   E+S    +    N+   E  +         
Sbjct: 764  -RIIEPQKYGDLLNQQVIKLRYSPRKMAIHERSHNIVLIESDNKVYNESQKKQLIEQYYS 822

Query: 746  ------------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 781
                                    VR++D  T + ++ Y L+  E+  S+   +F +   
Sbjct: 823  NQNKGDLATQVDLLTAPSGNWASCVRIVDPVTRKTLNIYELENNEHALSMCMVNFDNKDE 882

Query: 782  VYYCVGTAYVLPEENEPTKGRILVFI------VEDGKLQLIAEKETKGAVYSLNAFNGKL 835
             Y CVGT  V   +  P +   + +I       +   L+L+ + E      +L+A  GKL
Sbjct: 883  TYVCVGT--VKDYQVHPNRNFSVCYINTFQLNEKLNTLELLHKTEIFEIPGALHAHKGKL 940

Query: 836  LAAINQKIQLYKW----MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            LA     ++ Y+     +L+    + LQS            +QT GD I V  +  S+ +
Sbjct: 941  LAGCGTFLRYYELGKKKLLKKAEIKGLQSPVNG--------IQTFGDRIYVSMVADSVHV 992

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG-- 949
            L Y+ ++    E   D    WMS+ ++LD   Y+G +   N F  R  S    + E    
Sbjct: 993  LKYRSKDQTFYEVCDDILPRWMSSFQVLDYHTYIGGDKFENAFVCRVPSNADEEMEENPM 1052

Query: 950  ----------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                            + E +  ++ GE +   +  SLV     S   +I  V++GT  G
Sbjct: 1053 AYKLRWETGYLNGAPFKTEQICHFYAGEVITTLQKASLV-----STGNEI--VLYGTSMG 1105

Query: 994  VIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 1050
             IG  A LP    E   F   L+  LR  +  + G +H  +RSF    K+V     +DGD
Sbjct: 1106 SIG--AYLPFQTKEDIDFFIHLEMYLRLDVLPLAGRDHVMFRSFYGPVKSV-----IDGD 1158

Query: 1051 LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L E F+ LS  +   ++  M+    E+ K+++E+
Sbjct: 1159 LCEQFIKLSSGKQKVLADEMDRHPHEVHKKLDEI 1192


>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
            purpuratus]
          Length = 949

 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 207/936 (22%), Positives = 406/936 (43%), Gaps = 144/936 (15%)

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +L     G +  + +  + + VT ++++      +A++++ L    ++I S YG+  L +
Sbjct: 33   FLAQTEQGDIFKITLETDDDMVTEIRMKYFDTVPVATSMNVLKTGFLFIASEYGNHYLYQ 92

Query: 328  L-------------NLQPDAKGSY----------VEVLERYVNLGPIVDFCVVDLERQGQ 364
            +             +  P  +G            +E +++  +L PI+   + DL  +  
Sbjct: 93   IAHLGDDDDEPEFSSATPLEEGDTFFFAPRTLRNLEEVDQLESLSPILSCQIADLASEDT 152

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFIS 423
             Q+    G     S+R++R+G+ ++E A  EL G    +W+++  +DD +D +++VSF++
Sbjct: 153  PQLYVACGRGPRSSMRVLRHGLEVSEMAVSELPGNPNAVWTVKKKSDDEYDAYIIVSFVN 212

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
             T +L++   + +EE    GF   T TL       + L+Q+    +R + +  R   NEW
Sbjct: 213  ATLVLSIG--ETVEEVTDSGFLGTTPTLSSSLIGDDALLQIYPDGIRHIRADKR--VNEW 268

Query: 484  KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIG 541
            K+P   S+     N  QV++A  GG +VY E+   G L E  +  ++  ++ C+ +  + 
Sbjct: 269  KTPGKKSIVKCAVNQRQVVIALTGGEMVYFEMDPTGQLNEYTERKEMNADVKCMSLATVP 328

Query: 542  ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE--------- 591
                 ++  AVG+  D +VR+ SL   + +  + L  + +P     LC  E         
Sbjct: 329  SGEQRARFLAVGL-DDNTVRVISLDQSDCL--QPLSMQALPAPAEALCIIEMGGTEAREE 385

Query: 592  -------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
                   G  +L   L +G LL  +L+  TG+L+D +   LG++P+ L   + + +  V 
Sbjct: 386  TGERGSSGGLFLNIGLQNGVLLRMVLDSVTGDLSDTRTRYLGSRPVKLFRINMQGSEAVL 445

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
            A S R  + Y    +   + ++ + +     F S   P+ +       L I  ++ +  +
Sbjct: 446  AMSSRSWLSYWYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAV 505

Query: 705  HIR-SIPLGEHPRRIC-HQEQSRTFAICSLKN-----------QSCAEE----------- 740
              + S  L   PR+   H E +    I +  N           Q  AEE           
Sbjct: 506  FNQVSTQLKYTPRKFAVHLENNNIVVIETDHNTYTDSTKAQRKQQMAEEMVEAAGEEEKE 565

Query: 741  --SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILS 773
              +EM                           +RLL+    + +    L+  E   S+  
Sbjct: 566  LAAEMAEAFLQEELPESTFSSPKAGSGMWASTIRLLNPVQGQTLDMVELEQNEAAFSLAL 625

Query: 774  CSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVFIV--EDGKLQLIAEKETKGAVYSLN 829
              F++ +   +  VGTA  V       + G I  +++  E  KL+ + +        S+ 
Sbjct: 626  VKFANREDETHVLVGTAKDVTLSPRTCSGGAIHTYLLTEEGKKLEFLHKTLVDDVPSSIA 685

Query: 830  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMK 887
            AF G++L  I + +++Y     D G ++L  +C  + HI      + T G+ +++ D+ +
Sbjct: 686  AFQGRVLIGIGRLLRIY-----DLGKKKLLRKC-ENKHIPNFITNILTTGNRVIISDVQE 739

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATD 945
            S+  L YK +E  +   A D N  W++A  +LD D  + A+   N+  +R   +     D
Sbjct: 740  SLHFLKYKRQENQMVIFADDSNPRWITATCLLDHDTVMCADKFGNITVLRLPTSVNDNLD 799

Query: 946  E---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
            E         +RG L       +VV  + +GE V   +  +L+        G   +V++ 
Sbjct: 800  EDPTGVKALWDRGLLNGASQKTDVVSSFFIGETVLSLQKATLI-------PGGSESVVYT 852

Query: 990  TVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            T++G IGV+     HE + F + L+ ++R     + G +H  +RS+         KN +D
Sbjct: 853  TLSGAIGVLVPFTAHEDHDFFQHLEMHMRSEYAPLCGRDHLSYRSY-----YYPVKNVID 907

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL E +  +  ++   +++ ++ +  E+ K++E++
Sbjct: 908  GDLCEQYNSMELSKQRTVAEELDRNPSEVSKKLEDI 943


>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
            NIH/UT8656]
          Length = 914

 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 211/894 (23%), Positives = 379/894 (42%), Gaps = 119/894 (13%)

Query: 288  KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL---------------NLQP 332
            +V  LKI+      +A+++  L +  +++ S  G+    +                +   
Sbjct: 37   EVRALKIKYFDTVPVANSLHILKSGFLFVASESGNHHFYQFEKLGDDDEETEFTSDDYPA 96

Query: 333  DAKGSY------------VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
            D   +Y            + +++      P++D  V +L  +   Q+ +  GA    S +
Sbjct: 97   DPTAAYTPAFFHVRPLSNLNLVQSVDAANPLLDCKVANLLDEDAPQIYSICGAGARSSFK 156

Query: 381  IVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET 439
             +++G+ ++E    EL    + +W+ + + DD +D ++++SF   T  L +++ + +EE 
Sbjct: 157  TLKHGLSVSEIVESELPDKPEAVWTTKLTRDDQYDAYIILSF--RTGTLVLSIGETVEEV 214

Query: 440  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 499
               GF S   TL       + LVQV    +R + +  R   NEW +P   S+  AT N  
Sbjct: 215  TDTGFLSTAPTLAVQQLGEDALVQVHPKGIRHIRADKR--VNEWPAPQHRSIVAATTNER 272

Query: 500  QVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTD 557
            QV +A   G +VY E+  DG L E  +  ++   ++CL +  + E    S   AVG   D
Sbjct: 273  QVAVALSSGEIVYFEMDTDGSLAEYDERREMTGTVTCLSLGDVPEGRVRSSFLAVGC-DD 331

Query: 558  ISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLL 610
             +VRI SL PD  L  K        P ++ + A    +      YL   L  G  L  +L
Sbjct: 332  STVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSTSGGTTMYLHIGLYSGVYLRTVL 391

Query: 611  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLK 668
            +  TGEL+D +   LG +P  L   S K    V A S RP + Y+  +    + + ++  
Sbjct: 392  DEITGELSDTRTRFLGLRPAKLFRVSVKGQNAVMALSSRPWLGYTDTQTNGFMLTPLDYV 451

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK-LHIRSIPLGEHPRRICHQEQSRTF 727
             + ++  F S   P+ +   +   L I +I+D+ + L   +IPL   PR+         F
Sbjct: 452  PLQYVWNFTSEQCPEGMVGIQGQNLRIFSIEDLSRNLLQENIPLPYTPRKFVKHPDQPLF 511

Query: 728  AICSLKNQSCAEESEMHFVR----------LLDDQTFEF--------------------- 756
             +    N   A  +    +           +L  + F +                     
Sbjct: 512  YVIEADNNVLAPATRQKLLNESTAVNGDAVILPPEEFGYPKATGHWASCIQVVDPVNTKS 571

Query: 757  -ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK 812
             + T  L+  E   SI +  F S D  V+  VGTA  ++      + G + V+   EDGK
Sbjct: 572  VVFTLELEDNECATSITTAPFASQDDEVFLIVGTAKDLVVSPRSFSAGFLHVYRFHEDGK 631

Query: 813  -LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 871
             L+ I + + +    +L AF G+LLA +   +++Y     D G +++  +C      L +
Sbjct: 632  ELEFIHKTKVEQPPTALLAFQGRLLAGVGPDLRIY-----DLGMKQMLRKCQVTTPNLIV 686

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             +QT+G  I+V D+ +S++  +YK +E  +     D  A W +   ++D +   G +   
Sbjct: 687  GLQTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGDKFG 746

Query: 932  NLFTVR---KNSEGATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVM 973
            NL+ +R   K SE A ++        ERG       RL ++  Y  G+     +  +LV 
Sbjct: 747  NLWMLRCPQKVSEEADEDNSGVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTNLV- 805

Query: 974  RLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKG--VGGLNHEQ 1030
                   G    V +    G +G++   +  E   F + L+  L        + G +H  
Sbjct: 806  ------AGGRDVVFWTGFQGTLGILVPFVSREDVDFFQSLEMQLASSNGNPPLLGRDHLI 859

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +RS+    K V     +DGDL E+F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 860  YRSYYAPSKGV-----IDGDLCETFFLLPNDKKLMIAGELDRSVREIERKISDM 908


>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1174

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 253/1215 (20%), Positives = 494/1215 (40%), Gaps = 185/1215 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y +T  K T +  +  GNF+ P+   ++++K   IE  LL     + +    ++G I ++
Sbjct: 4    YSLTLQKSTGIQKAIYGNFSGPKAQEIVVSKVKHIE--LLKINESKTIASQEVFGIIRSI 61

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIID 124
              FR  G  +D L I ++  +  VL +D   + +  +   +   + G R    GQ    D
Sbjct: 62   HSFRFPGNNRDNLVIGSDSGRVVVLGFDGLKN-MFVKVHQETYGKTGCRRIVPGQYLACD 120

Query: 125  PDCR---LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK-PTI 177
            P  R   +  +  +  ++ +   + K  +            V DI  L   Y  A+   I
Sbjct: 121  PKGRAFMISAVEKHKFVYILTRENEKITISSPLEAPKSHTIVFDIVGLDAGYDNAQFAAI 180

Query: 178  VVLYQDNKDARH-----VKTYEVALKDKDFVEGPWSQNNLD-----NGADLLIP-VPPPL 226
               Y D +D        ++T  + + + DF      +   D     + A L++P  P   
Sbjct: 181  ESDYGDWQDKDSAVCTGIQTKFLTIYEMDFGLNTVRRQRSDPIHISSHALLMVPNAPDGP 240

Query: 227  CGVLIIGEETIVY-CSANAFKAIPI---------RPSITKAYGRVDADGS-RYLLGDHAG 275
             GV+++ E+ + Y    N    +P          R ++  ++G      S  YLL    G
Sbjct: 241  GGVIVLCEDFLHYRGPKNQEMKVPYPKNQGMPTDRGAMISSFGFYKQKSSFLYLLQSEYG 300

Query: 276  LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN------ 329
             L  L +   K++V  +++       +A+++  + +  ++     G+    K        
Sbjct: 301  DLFELSLQFTKDEVHSIRMIYFDTIPVANSLCLMRSKHLFAACEKGNHCFYKYQREETNT 360

Query: 330  ----------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGA 373
                             +P  K  ++ +L+   N   I D  V DL ++G  Q+  C  A
Sbjct: 361  NIICTDSSMALEEQIFFKPQ-KLKHLSLLQELNNFSCISDLKVADLAKEGNPQIYICCAA 419

Query: 374  YKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNL 432
                +LR++R+G+ I + A+  LQ    G+W+L+   +DP   ++V+S+I++T  L + +
Sbjct: 420  GNRSTLRVLRHGLEITQLANTNLQAKPLGIWTLKERYEDPVHKYIVISYINKT--LVLKI 477

Query: 433  EDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
             +++E+    G     QT+     I +  +Q+ +   R +           K P  Y ++
Sbjct: 478  GEKVEQVHDTGLEGTKQTIHVGTLIDDSQIQILTNGYRHIRKN--------KPPTDYIID 529

Query: 493  ----VATANASQVLLATGGGHLVYLEIG----DGILTEVKHAQLEYEISCLDINPIGENP 544
                   +N  QV  A  GG + Y E+      G L E+   Q++ EI  L++ PI E  
Sbjct: 530  GKVIKGVSNEKQVAFALAGGDVYYFELDTTSFQGNLIEITKDQMDNEIKALELGPIEEGR 589

Query: 545  SYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS--------- 594
               +   V + +D ++R+ SL   +   +  +  + +P     LC  E  S         
Sbjct: 590  QRCKFLCVAL-SDQTIRLLSLEPESCFERGAM--QALPSEAESLCMMEMASEQEGQQSFT 646

Query: 595  ---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
               +L   L +G L+   ++  +G L+D +   LGT+P+     ++     + A S R  
Sbjct: 647  KQLFLFIGLNNGLLMRTSVDQLSGGLSDTRTRYLGTKPVKCLRINANQQQAMLALSSRSW 706

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI----- 706
            + Y+++ ++    ++   + +   F          +AKE +  +GT     ++ +     
Sbjct: 707  LCYNNSGRIFMQPLSYDYLDYASAF----------LAKEFQGIVGTNQSTLRIIMPERFG 756

Query: 707  -----RSIPLGEHPRRICHQEQSRTFAICSLKNQSC------------------------ 737
                 +S+ L   PR++   E S+   I    N+S                         
Sbjct: 757  EIFNQQSLDLTYSPRKMIFHEPSKAIFIIESDNRSYNNVEQKVQEVYQTQEIPEQWNQVQ 816

Query: 738  AEESE-MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 796
            AE+ +    +R++D    E I+ +     ++ CSI    F+     Y CVGT   L   N
Sbjct: 817  AEQYKWASLIRIVDATKLETINVHQFYENQHACSICYIQFAGYPEQYVCVGTVKDLV--N 874

Query: 797  EPTK----GRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW---- 848
            EPT+    G I  FI ++  L+L    +     Y+L A+ G+LL      +++Y+     
Sbjct: 875  EPTRKFSQGFIHTFIYDNKTLKLKHSTQIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQR 934

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
            +L+    + L S            +  + D I V ++  SI LL Y   +    E A D 
Sbjct: 935  ILKKAEIKNLNS--------FITSIMVKEDRIYVAEVSDSIHLLRYNIRDQTFMELADDI 986

Query: 909  NANWMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGR 950
               +++A  +LD    +  +   N+F  R                  K  +G  +    +
Sbjct: 987  LPRYVTASTVLDYHTVIAGDKFENIFVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAPFK 1046

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FL 1009
            ++ +  +++GE +   +  +LV     S+V     V++GT  G I  +    +++ + F 
Sbjct: 1047 MDQICNFYVGEVITSLQKIALVS--TSSEV-----VVYGTSMGSIAALYPFDNKEDIDFF 1099

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
              L+  LR   + + G +H Q+RS     K++     +DGDL E F ++   +   +++ 
Sbjct: 1100 LHLEMYLRVEHQPLSGRDHMQFRSAYGPCKSI-----IDGDLCEQFGNMQYNKQRTVAEE 1154

Query: 1070 MNVSVEELCKRVEEL 1084
             + +  ++ K++E++
Sbjct: 1155 FDRTPADIIKKLEDI 1169


>gi|443918546|gb|ELU38987.1| CPSF A subunit region domain-containing protein [Rhizoctonia solani
            AG-1 IA]
          Length = 1037

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 217/845 (25%), Positives = 356/845 (42%), Gaps = 97/845 (11%)

Query: 264  DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
            DG   ++GD  G LHL  ++ E +    +   LLG+ S    +   + +V     S G  
Sbjct: 219  DGKHIIVGDSFGHLHLATMSMEPQ--FAMSCMLLGDVSTCMILLDPEGSV-----SRGKK 271

Query: 324  QLIKLNLQPDAKGSYVEVL-ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 382
            +      QPD + +++EV+ E   NL PI+D  +V+++  GQ ++   SG    G L +V
Sbjct: 272  K------QPDDETTHLEVIVEHNKNLAPILDATLVEIDGSGQPRIALISGDESGGWLSVV 325

Query: 383  RNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE----LE 437
              G    E A ++ L  ++ ++ L+   D+   ++LV S  + T IL+  L D     L 
Sbjct: 326  HKGASFRELAILDGLGHLENIFPLKKYFDERTHSYLVASTTTSTYILS--LADSSISLLS 383

Query: 438  ETEIEGFCSQTQTLFCHDAIY---NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 494
              E+ G      T+   +      +  + VT   + L+   +    + WK P G     A
Sbjct: 384  REELSGISRSETTILASNVPLGGVDAAIHVTPQKIVLIDIITGRAISSWKPPKGDITAAA 443

Query: 495  -TANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 553
               ++S + +AT  GHL  L I    L +    +  ++IS L IN        + I A  
Sbjct: 444  LDTSSSTICVATSEGHLFSLNIQSAGLLQT--GKPHWQISSLAIN--------AGIVAAA 493

Query: 554  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYL--LCA--LGDGHLLNFL 609
             W    V+IF LP L  +  E +  E    SV+  +  GI  +   CA    + +  +++
Sbjct: 494  FWGSNEVQIFLLPGLKRV-GESVIQEPSAASVVYLSNFGIPNVPDRCAPRWSNCYTSDYI 552

Query: 610  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR---PTVIYSSNKKLLYSNVN 666
                  +            P   R+ S  + +  F  S      T   S   K    +V 
Sbjct: 553  QGRTRAQYA-------ACSPTGCRSCSYHDGSRAFRGSGHRCWETFNGSFGCKQAPFSVL 605

Query: 667  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID---DIQKLHIRSIPLGEHPRRICHQEQ 723
            +  +       S  F D     K G + IG      D Q L  +     + P  + H E+
Sbjct: 606  VAPIGEQNGHQSKCFSD----IKSGCMRIGGSQRTWDSQYLFYQYNLGSDTPLCLAHHEE 661

Query: 724  SRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 783
               +AI  ++ ++   E E HFVR  DD TF+ +  Y L   E   SI    ++   N Y
Sbjct: 662  LSKYAIGCVRPRTDVLE-ERHFVRFHDDSTFKDLGQYKLKYSEMVTSI--GVYTHGGNSY 718

Query: 784  YCVGTAYVLPEENEPTKGRILVFIV-EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
               GTA + P ENEP  GRI++F   E+  ++  A K+ +G V S+     +++AAI   
Sbjct: 719  ILAGTAIINPGENEPLAGRIILFGQDEENMIKFKASKDVEGGVSSIKQLGARIIAAIGHG 778

Query: 843  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA-- 900
            I LY  + R + T          G+I+   +  R + IVV D ++S+S+L +        
Sbjct: 779  IYLYN-LGRGEVTISDPVARWERGYIVHDII-VRPNMIVVSDRLRSVSVLRFIERTSTPE 836

Query: 901  ---------------IEERARDYNANWMSAVEIL-DDDIYLGAENNFNLFTVRKNSEGAT 944
                            E  A D +A W ++VE+L D+   + ++ + N+ T         
Sbjct: 837  SHEEIETEEDSTILQFETVAMDMHAVWPTSVEVLPDNKTIIASQTDGNILT--------W 888

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
            + E G LE    +H GE +++F     +     S  G     IF T  G IG ++++   
Sbjct: 889  ELEDGNLEPRAAFHTGEIIHKF-----IASTAKSSAGPRTVAIFVTNTGRIGTLSTVDDA 943

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRS---FNNEKKTVDAKNFLDGDLIESFLDLSRT 1061
              L L +L+  L   IKG+G + H +WR+    +   K    +   DGD I+ FL+LS  
Sbjct: 944  DALQLTRLEMKLGDAIKGLGNIKHPEWRAPKLLHTGTKPPPRRGVTDGDFIKKFLELSSE 1003

Query: 1062 RMDEI 1066
                I
Sbjct: 1004 EAKRI 1008


>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str. Silveira]
          Length = 970

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 232/982 (23%), Positives = 410/982 (41%), Gaps = 156/982 (15%)

Query: 228  GVLIIGEETIVYCSAN--AFKA-IPIRPSITKAYGRVDADGSRYLLGDHAGLLHLL---- 280
            GVL+  E  I Y  +N  AF+  IP R   T+     + +  RY+    AG++H +    
Sbjct: 14   GVLVCSEGNITYRHSNQDAFRVPIPRRSGPTE-----NPERKRYIT---AGVVHKMRRAF 65

Query: 281  -----------------VITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIGSS 319
                             ++  E  ++TG    LK++      +AS++  L N  +++ S 
Sbjct: 66   FCLLQTEDGDLFKVTMDMVEDENGQLTGEVQRLKLKYFDTVPVASSLCILKNGFLFVASE 125

Query: 320  YGDSQLIKLN-----------------------LQP----DAKGSYVEVLERYVNLGPIV 352
             G+    +                         L P          + ++E   +L P++
Sbjct: 126  TGNHHFYQFEKLGDDDEETEFSSDDFSADPSEPLAPVYFRPRPAENLNLVESINSLNPLM 185

Query: 353  DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDD 411
               + +L      Q  T SG     + R +++G+ ++E    EL  +   +W+ + + +D
Sbjct: 186  SCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKLTRND 245

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             +D ++++SF + T +L++   + +EE    GF S   TL       + L+QV    +R 
Sbjct: 246  QYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRH 303

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLE 529
            + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  +  ++ 
Sbjct: 304  IHADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMS 361

Query: 530  YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LL 587
              ++CL +  I      S   AVG   D +VRI SL PD  L  K        P ++ ++
Sbjct: 362  GTVTCLSLGEIPPGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALSIM 420

Query: 588  CAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
               +  S     YL   L  G  L  +L+  TGEL+D +   LG + + L + S K    
Sbjct: 421  SMVDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQRA 480

Query: 643  VFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
            V A S RP + YS    K  + + ++   +     F+S    + +   +   L I +I+ 
Sbjct: 481  VLALSSRPWLGYSDLQTKNFMLTPLDYVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEK 540

Query: 701  I-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF----------VRLL 749
            +   L   +IPL   PR      +   F +    N   +  ++             V  L
Sbjct: 541  LDNNLLQETIPLAYTPRHFVRHPEQPLFYVIEADNNILSPSTKAKLLQDSKAANGEVAEL 600

Query: 750  DDQTFEF----------------------ISTYPLDTFEYGCSILSCSFSD-DSNVYYCV 786
              + F +                      IS   L+  E   S+ +  FS  D   +  V
Sbjct: 601  PPEDFGYPRGTGHWASCIQVVDPINSKAVISRIELEENEAAVSVAAVPFSSQDDETFLVV 660

Query: 787  GTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
            GT     V P  +  + G I ++   EDGK L+ I + + +   ++L AF G+LLA I +
Sbjct: 661  GTGKDMVVYPPSS--SCGFIHIYRFQEDGKELEFIHKTKVESPPHALLAFQGRLLAGIGR 718

Query: 842  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 900
             +++Y     D G ++L  +C       L + +QT+G  I+V D+ +S++ ++YK++E  
Sbjct: 719  NLRIY-----DLGMKQLLRKCQAEVVPRLIVGLQTQGSRIIVSDVQESVTYVVYKYQENR 773

Query: 901  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEY 957
            +   A D  A W +   ++D +   G +   NL+ +R   K SE A ++  G   +    
Sbjct: 774  LIPFADDVIARWTTCTAMVDYETVAGGDKFGNLWLLRCPQKASEEADEDGSGAHLIHERQ 833

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT--------------VNGVIGVIAS-LP 1002
            +L    NR    SL++     D   IPT I  T              + G +G++   + 
Sbjct: 834  YLQGAPNRL---SLMVHFYPQD---IPTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVS 887

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
             E   F + L+  L      + G +H  +RS+        AK  +DGDL E++  L   +
Sbjct: 888  REDVDFFQSLEMQLTSQTPPLAGRDHLIYRSY-----YAPAKGTIDGDLCETYFTLPNDK 942

Query: 1063 MDEISKTMNVSVEELCKRVEEL 1084
               I+  ++ SV E+ +++ ++
Sbjct: 943  KLMIAGELDRSVREIERKISDM 964


>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1178

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 246/1216 (20%), Positives = 495/1216 (40%), Gaps = 183/1216 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIYGRIA 63
            Y +T  K T +  +  GNF+ P+   ++++K   IE+  +      L+ +    ++G I 
Sbjct: 4    YSLTLQKSTGIQKAIYGNFSGPKAQEIVVSKVKHIELLKINDSNGKLETIASQEVFGIIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
            ++  FR  G  +D L I ++  +  VL +D + + +  +   +   + G R    GQ   
Sbjct: 64   SIHSFRFPGNNRDNLVIGSDSGRVVVLGFDGQKN-MFVKVHQETYGKTGCRRIVPGQYLA 122

Query: 123  IDPDCR---LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK-P 175
             DP  R   +  +  +  ++ +   + K  +            V DI  L   Y  A+  
Sbjct: 123  CDPKGRAFMISAVEKHKFVYILTRENEKITISSPLEAPKSHTIVFDIVGLDAGYDNAQFA 182

Query: 176  TIVVLYQDNKDARH-----VKTYEVALKDKDFVEGPWSQNNLD-----NGADLLIP-VPP 224
             I   Y D +D        ++T  + + + DF      +   D     + + L++P  P 
Sbjct: 183  AIESDYGDWQDKDSAVCTGIQTKFLTIYEMDFGLNTVRRQRSDPIHISSHSLLMVPNAPD 242

Query: 225  PLCGVLIIGEETIVY-CSANAFKAIPI---------RPSITKAYGRVDADGS-RYLLGDH 273
               GV+++ E+ + Y    N    +P          R ++  ++G      S  YLL   
Sbjct: 243  GPGGVIVLCEDFLHYRGPKNQEMKVPYPKNQGMPADRGAMISSFGFYKQKSSFLYLLQSE 302

Query: 274  AGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPD 333
             G L  L +   K++V  +++       +A+++  + +  ++     G+    K   +  
Sbjct: 303  YGDLFELSLQFTKDEVHSIRMIYFDTIPVANSLCLMRSKHLFAACEKGNHCFYKYQREET 362

Query: 334  A---------------------KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSG 372
            +                     K  ++ +L+   N   I D  V DL ++G  Q+  C  
Sbjct: 363  STNIICTDSSMALEEQIFFKPQKLKHLSLLQELNNFSCISDLKVADLAKEGNPQIYICCA 422

Query: 373  AYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMN 431
            A    +LR++R+G+ I + A+  LQ    G+W+L+   +DP   ++V+S+I++T  L + 
Sbjct: 423  AGNRSTLRVLRHGLEITQLANTNLQAKPLGIWTLKERYEDPVHKYIVISYINKT--LVLK 480

Query: 432  LEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSV 491
            + +++E+    G     QT+     I +  +Q+ +   R +           K P  Y +
Sbjct: 481  IGEKVEQVHDTGLEGTKQTIHVGTLIDDSQIQILTNGYRHIRKN--------KPPTDYII 532

Query: 492  N----VATANASQVLLATGGGHLVYLEIG----DGILTEVKHAQLEYEISCLDINPIGEN 543
            +       +N  QV  A  GG + Y E+      G L E+   Q++ EI  L++ PI E 
Sbjct: 533  DGKVIKGVSNEKQVAFALAGGDVYYFELDTTSVSGNLIEITKDQMDNEIKALELGPIEEG 592

Query: 544  PSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS-------- 594
                +   V + +D ++R+ SL   +   +  +  + +P     LC  E  S        
Sbjct: 593  RQRCKFLCVAL-SDQTIRLLSLEPESCFERGAM--QALPSEAESLCMMEMASEQEGQQSF 649

Query: 595  ----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 650
                +L   L +G L+   ++  +G L+D +   LGT+P+     ++     + A S R 
Sbjct: 650  TKQLFLFIGLNNGLLMRTSVDQLSGGLSDTRTRYLGTKPVKCLRITANQQQAMLALSSRS 709

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI---- 706
             + Y+++ ++    ++   + +   F          +AKE +  +GT     ++ +    
Sbjct: 710  WLCYNNSGRIFMQPLSYDYLDYASAF----------LAKEFQGIVGTNQSTLRIIMPERF 759

Query: 707  ------RSIPLGEHPRRICHQEQSRTFAICSLKNQSC----------------------- 737
                  +S+ L   PR++   E S+   I    N+S                        
Sbjct: 760  GEIFNQQSLDLTYSPRKMIFHEPSKAIFIIESDNRSYNNIQQKVQEVYQTEELPEQWNQI 819

Query: 738  -AEESE-MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 795
             AE+ +    +R++D    E ++ +     ++ CSI    F+     Y CVGT   L   
Sbjct: 820  QAEQYKWASLIRIVDATKLETVNVHQFYENQHACSICYIQFAGYPEQYICVGTVKDLV-- 877

Query: 796  NEPTK----GRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW--- 848
            NEP++    G I  F+ ++  L+L          Y+L A+ G+LL      +++Y+    
Sbjct: 878  NEPSRKFSQGFIHTFVYDNKTLKLKHSTPIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQ 937

Query: 849  -MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
             +L+    + L S            +  + D I V ++  SI LL Y   +    E A D
Sbjct: 938  RILKKAEIKNLNS--------FITSIMVKEDRIYVAEVADSIHLLRYNIRDQTFMELADD 989

Query: 908  YNANWMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERG 949
                +++A  +LD    +  +   N+F  R                  K  +G  +    
Sbjct: 990  ILPRYVTASTVLDYHTVIAGDKFENIFVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAPF 1049

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-F 1008
            +++ +  +++GE +   +  +LV     S+V     V++GT  G I  +    +++ + F
Sbjct: 1050 KMDQICNFYVGEVITSLQKIALVS--TSSEV-----VVYGTSMGSIAALYPFDNKEDIDF 1102

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 1068
               L+  LR   + + G +H Q+RS     K++     +DGDL + F ++   +   +++
Sbjct: 1103 FLHLEMYLRVEHQPLSGRDHMQFRSAYGPCKSI-----IDGDLCDQFGNMQYNKQRAVAE 1157

Query: 1069 TMNVSVEELCKRVEEL 1084
              + +  ++ K++E++
Sbjct: 1158 EFDRTPADIIKKLEDI 1173


>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1213

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 262/1231 (21%), Positives = 503/1231 (40%), Gaps = 179/1231 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  +   +T S +GNF+  +   +++A  + +E+    P    +  +L   ++G I 
Sbjct: 4    YNLTLQQSEAITCSVLGNFSGIKSQEIVVAHTSVLELLRPDPSTGKIVSLLSHQVFGLIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +L  FR  G ++D+L + ++  +  +L+++   +               R    GQ    
Sbjct: 64   SLAAFRLAGASKDYLVVGSDSGRIVILEYNPAKNTFDKVHQETYGKTGARRVVPGQYLAA 123

Query: 124  DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKPTIV 178
            DP  R  +IG      L  ++  D+  +L  +  +   +  ++    I    G   P   
Sbjct: 124  DPKGRAVMIGAIEKQKLAYILNRDSSLKLTISSPLEAHKTAIICHGIIGVDVGYENPIFA 183

Query: 179  VLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP--- 223
             +  D  DA    T E A   +            + +   W++  +D  A+ LI +P   
Sbjct: 184  SIEVDYSDADQDPTGEAARDAEKMLTYYELDLGLNHIVRKWTEK-IDFSANHLIAIPGGD 242

Query: 224  --PPLCGVLIIGEETIV--------YCSANAFKAIPIRPSITKAYGRVDADGS------- 266
              P   GVL+  E  I         +C     +  P+   I     +V    S       
Sbjct: 243  DGP--SGVLVCSEGRITWKHMQKPSFCVPIPQRPDPLTSVIPGTQNKVIVVSSVVHRLKR 300

Query: 267  RYLLGDHAGLLHLLVITHE--------KEKVTGLKIELLGETSIASTISYLDNAVVYIGS 318
             + +     +  +  IT E          +V  +KI+      +A  +S L +  ++  S
Sbjct: 301  GFFVLAQTEVGDVFKITVECTADSSGNAGQVQAIKIKYFDTIPVAVNLSLLKSGFLFAAS 360

Query: 319  SYGDSQLIKLNLQPDAKGSYVEV--------------------------------LERYV 346
             +G+  L ++    D   S VE                                 ++   
Sbjct: 361  EFGNHYLYQIENLGDDDESQVEYSSVDFPQGDSLPDSDSMPVVAFIPRELRNLAPVDEME 420

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 405
            +L P++D  V++L  +   Q+    G     + RI+R+G+ ++E A  EL G    +W++
Sbjct: 421  SLCPLIDAKVLNLTDENSPQIYALCGRGSRSTFRILRHGLDVSEMAVSELPGNPNAIWTV 480

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            R S  D +D+++++SFI+ T +L++   + +EE    G  + T T+       N LVQV 
Sbjct: 481  RRSVSDIYDSYIIISFINATLVLSIG--ETVEEVTDTGVLATTSTITVGQLGENALVQVY 538

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 524
               +R + +  R   +EWK+P   S+  A  N  QV++A     +VY E+   G L E +
Sbjct: 539  PQGIRYIRADKRV--SEWKAPTNQSIVSAACNQRQVVVALSNNEIVYFELDVSGHLNEFQ 596

Query: 525  -HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEI 580
               ++   + CL ++PI      ++  A+G   D++VRI SL P+  L+ ++ + L    
Sbjct: 597  DRKEMSSRVLCLSLSPIPTGRLRARFLAIG-CADLTVRILSLDPESCLHPLSMQALSAP- 654

Query: 581  IPRSVLLCAFE----GIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
             P S+ +        G+S  +L   L +G LL   ++  +G ++D +   LG++ + L  
Sbjct: 655  -PDSLAMIDMPDPTTGVSNLFLNIGLANGVLLKTCVDSGSGNMSDTRMRFLGSRGVKLFL 713

Query: 635  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
               +  T + A S RP + ++ + +     ++ + + +   F S    + +       L 
Sbjct: 714  LKIQGETGLLALSSRPWISFTYHSRSKLMPLSYESLEYGSSFCSEQCTEGIVAITGNTLR 773

Query: 695  IGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTF-------------------------- 727
            I   + +  +  + SIPL   PRR    + S+ F                          
Sbjct: 774  ILNTEKLGSVFKQASIPLKYTPRRFIFDQVSQNFVVIESDHGVFCPSDRAKILETKATLD 833

Query: 728  ----------AICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF- 776
                      A+    +     E     +R++     E +    LD  E    I  C F 
Sbjct: 834  ADEGTIPEELAVEQFGHSKAGPERWASCIRVISPIHGETLHLEDLDDNEAAFCISFCIFQ 893

Query: 777  SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNG 833
            S  +  +  VGTA  V    +  T+G + V+ +  DG  L+ + +   KG    + +F G
Sbjct: 894  SSLTTTHIVVGTASNVNLSSSSFTEGYLRVYKLAPDGTSLEFLHKTPIKGIPKVMCSFQG 953

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLL 892
            +LL  +   +++Y     D G +++  +C   G    +  + T+G+ I++GD  +S+   
Sbjct: 954  RLLVGVGSLLRIY-----DLGKKKMLRKCECKGFPTTIVTLHTQGNRIILGDAQESVHYA 1008

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE--GATDE---- 946
            +Y+  +  I   A D    W++A  ++D D  +G +   N+F  R ++E     DE    
Sbjct: 1009 MYRAFDNRIVIFADDTIPRWVTATCMVDYDTVVGGDKMGNIFVNRLSAEVSKGIDEDTTG 1068

Query: 947  -----ERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
                 +RG L+          ++ LGE +      SLV        G    +++ T+ G 
Sbjct: 1069 NQAIFDRGYLQGAPHKVHHEADFFLGETLTSLTKTSLV-------PGGREILLYTTLMGG 1121

Query: 995  IG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
            IG +I  +  +   F + L+  +R     + G +H  +RSF      +     +DGDL E
Sbjct: 1122 IGLLIPFISKDDVDFFQTLEMTMRSECPPLCGRDHLAYRSFYTPVHAI-----IDGDLCE 1176

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             F  +   +   I+++++ SV ++ K++E++
Sbjct: 1177 MFNVMVGDKKRGIAESVDRSVADVGKKLEDM 1207


>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
 gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
          Length = 1171

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 267/1230 (21%), Positives = 499/1230 (40%), Gaps = 219/1230 (17%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + + + ++  GNF+  ++  +++++   +E+    P    + P+L + ++G + 
Sbjct: 4    YALTLQRASAINNTIHGNFSGTKQQEIVVSRGKFVELLRTDPNTGKVFPVLAIEMFGIVR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
             L  FR  G ++DF+ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64   DLIAFRLTGGSKDFIVVGSDSGRIVILEY-IPSKNVFEKVHQETFGKSGCRRIVPGQYLA 122

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
             DP  R  +IG      L  ++  D+  +L  +  +   +   L    +    G   P  
Sbjct: 123  ADPKGRAIMIGAIEKQKLVYIMNRDSAARLTISSPLEAHKSHTLVYHMVGVDAGFENPMF 182

Query: 178  VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
              L  D ++A    T E A   +    F E     N+        L+   +LLI VP   
Sbjct: 183  ACLEMDYEEADTDHTGEAAQTTQQTLTFYELDLGLNHVVRKYSEPLEEHGNLLIAVPGGS 242

Query: 224  PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------------- 267
                GVL+  E  + Y   N      IR  I +    +D D  R                
Sbjct: 243  DGPSGVLVCSENYLTY--KNFGDQPDIRMPIPRRKYDLD-DPERGMLFICSATHKTKSMF 299

Query: 268  -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             +L+    G +  + +  +++ VT ++++       A ++  L    ++  S +G+  L 
Sbjct: 300  FFLVQTEQGDIFKITLETDEDMVTEIRMKYFDTVPPAVSMCVLKTGFLFTASEFGNHYLY 359

Query: 327  KLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ 362
            ++                          QP    + V +++   +L PI++  + DL  +
Sbjct: 360  QIAHLGDDDDELEFSSTMELEEGTTFFFQPRGLKNLV-LVDELESLAPIMNCQIADLANE 418

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
               Q+    G     SLR++R+G+ ++E A  EL G    +W+++ +T D FD ++VVSF
Sbjct: 419  DTPQLFAACGRGSRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKHTTADEFDAYIVVSF 478

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            I+ T +L++   + +EE    GF   T TL C       LVQ+    +R + +  R   N
Sbjct: 479  INATLVLSIG--ETVEEVTDSGFLGTTPTLSCSQLGEEALVQIYPDGIRHIRADKR--VN 534

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTE-VKHAQLEYEISCLDINP 539
            EWK+P   ++  +  N  QV++A  GG +VY E+   G L E  +  ++  ++ C+ +  
Sbjct: 535  EWKAPGKKTIVKSAVNERQVVIALTGGEVVYFEMDSSGQLNEYTERKEMSADVQCMALGT 594

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGISYLLC 598
            I      S+  A+G+ +D +VRI SL   + +T   +     +P S  LC  E       
Sbjct: 595  ILHGELRSRFLAIGL-SDNTVRIISLDPQDCLTPLSMQALPAMPES--LCIVEMGGKEGA 651

Query: 599  ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 658
                G +    LN+   E      + L  +P             V A S R  + Y+   
Sbjct: 652  ESEGGSMGGLFLNIGLSE------ICLTLEP-----------GEVLAMSSRSWLSYTHQS 694

Query: 659  KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR 717
            ++  + ++ + + +   F+S   P+ +       L I  ++ +  +  + + PL   PR+
Sbjct: 695  RVHLTPLSYETLEYASGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVATPLKYTPRK 754

Query: 718  ICHQEQSRTFAICSL------------KNQSCAEE------------------------- 740
                  + T  +               + Q  AEE                         
Sbjct: 755  FVIHSPTNTLVVIETDHNTYTDAAREERKQQMAEEMVEMASEEEKELAAQAAAEFLSEEL 814

Query: 741  SEMHF-------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS---DDSNVYY 784
            SE  F             +R+LD    E      LD  E   S+  CSFS   DD+  + 
Sbjct: 815  SEQQFGSPKAGTGMWASVIRVLDPIKGETHDVVQLDQNEAAFSVCVCSFSARPDDT--FV 872

Query: 785  CVGTAYVLP-EENEPTKGRILVF-IVEDG----KLQLIAEKETKGAVYSLNAFNGKLLAA 838
             VGTA  +       + G +  + +V+      KL+   + E      +L  F G+LLA 
Sbjct: 873  IVGTAKDMALSPRSCSTGYLYAYRLVQQPSGGIKLEFQHKTEVDDVPAALEPFQGRLLAG 932

Query: 839  INQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
            I + +++Y    K MLR    ++L +            + + G  IVV D+ +S   + Y
Sbjct: 933  IGRLLRVYDIGKKKMLRKCENKKLPN--------FICNINSMGTRIVVSDIQESFHFVKY 984

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE-------- 946
            K  +  +   A D N  W++    LD D   GA+   N+FTVR  S G++D+        
Sbjct: 985  KPRDNQLVVFADDVNPRWLTCCCYLDYDTLAGADKFGNIFTVRLPS-GSSDDVDEDPTGT 1043

Query: 947  ----ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 995
                +RG       +LE +  Y +GE V   +  +L+        G   +++F T++G +
Sbjct: 1044 KAFWDRGLLNGAQQKLETMCNYFVGETVLSLQKATLI-------PGGSESLVFTTLSGGV 1096

Query: 996  GVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            G++      E   F + L+ +LR                  +E+ ++   + +DGDL E 
Sbjct: 1097 GMLVPFTSREDIDFFQHLEMHLR------------------SEQPSL---SVVDGDLCEH 1135

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +  L  ++   I++ ++ +  E+ K++E++
Sbjct: 1136 YNSLDYSKRRTIAEELDRTPAEVSKKLEDI 1165


>gi|392578232|gb|EIW71360.1| hypothetical protein TREMEDRAFT_71141 [Tremella mesenterica DSM 1558]
          Length = 1250

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 224/890 (25%), Positives = 375/890 (42%), Gaps = 140/890 (15%)

Query: 262  DADGSRYLLGDHAGLLHLLVITHEKEKVTG--------LKIELLGETSIASTISYLDNAV 313
            D D +  LLGD AG L  L I   +E ++         LK +L G  +  S+++ L ++ 
Sbjct: 356  DRDNAVVLLGDDAGHLTKLTIESAREDLSSKLSAVMKVLKTDL-GFAAAPSSLTLLGSSH 414

Query: 314  VYIGSSYGDSQLIKLN---------LQPDAKG---------------------SYVEVLE 343
            V++GS+ GD+ +I+L          L P  K                      + VE++E
Sbjct: 415  VFMGSACGDALIIRLPSVTSSHSTPLSPALKSKGKARADDSLDGFGVEHYHETATVEMVE 474

Query: 344  RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGM 402
            R++NL P+ DFC V+ +  G   +V  +GA    SLR VR+G+ +     +E +QGI+ M
Sbjct: 475  RWMNLAPVKDFCAVEEDGGGLSHLVVAAGASNTNSLRAVRSGVSLETLMDIEGVQGIERM 534

Query: 403  WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL- 461
            W +   + D    FL  S    T  + + L  E++   +        T+    A + ++ 
Sbjct: 535  WPIMLPSRDQ-GIFLSTS----TSSMLLGLAPEVQALALPESVVNHPTIAA--ASWEEVA 587

Query: 462  VQVTSGSVRLVSSTSRELR-NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG---- 516
            V VT+ +V + S  +  ++   W       +  A  +     +A  GG LV L++     
Sbjct: 588  VIVTANNVTVWSDLTGSVKVGSWSHGQSRQILAAQISGGLAAIAISGGELVILQVSAHGV 647

Query: 517  DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
            D ILT     QL  EI+ + I         S I     WT+  + +F+L  L       +
Sbjct: 648  DAILTR----QLGGEIASVAI-----LDGLSPIVVTSTWTN-EIFLFTLDQLR---SPDM 694

Query: 577  GGEIIPR-----SVLLCAFEGISYLLCALGDGHLLNFLLNMKTG---ELTDRKKVSLGTQ 628
             G  I       S+ LC   G + LL  L DG ++ + +        EL++RK VSLGTQ
Sbjct: 695  QGSTIRENSFCASLQLCPLSGGARLLAGLSDGTMVTYHIESSANNALELSERKAVSLGTQ 754

Query: 629  PITLRTFS---SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSL 685
            P+ L   S     +       S+R  VI  S +++  S+VN  +       N+ +    L
Sbjct: 755  PLRLSPTSLSCGDDRIISVGLSERMCVISESRERIESSSVNRNDTRAAATINTPSHGSCL 814

Query: 686  AIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA------- 738
            A+A    +++     ++K+H+R++ LG       H+  SR   I  LK  +         
Sbjct: 815  ALATSSGISLVKPTSLKKVHVRTLDLG-------HRSVSRLTNISPLKAIAAGSTERPFD 867

Query: 739  -EESEMH---FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 794
             E  E+H   +V L D  T E +   PL++ E   +I   +  D +     VG A    +
Sbjct: 868  RETGEIHQSSYVELRDSTTLELLVEKPLESREIVTTIAYVTLGDQN--LLAVGIATFSED 925

Query: 795  ENEPTKGRILVFI-VEDGKLQL---IAEKET-------------KGAVYSLNAFNGKLLA 837
            + +      +V I  + G+L L   + ++++             + AV  +      L  
Sbjct: 926  DEDLPDDLDMVTISAQSGRLVLYEPVVDQDSAEPNLIELTSVGLESAVNDIKVIKNLLAV 985

Query: 838  AINQKIQLYKWMLRDD---GTRELQSECGHHGHILA----LYVQTRGDFIVVGDLMKSIS 890
            A    + +YK          T    S       ++A    L+ + R   +VVGD M+SI 
Sbjct: 986  ATGSNVTIYKHEKASHLLIPTSRFASAFVAKSLVVAPPDKLHPEER---LVVGDGMRSIF 1042

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDD----IYLGAENNFNLFTVRKNSEGATDE 946
            +L      G I    RD   + + A+E L D     I   A +N + F +R+        
Sbjct: 1043 VLDIDEGTGMIMGDERDMATHSVMAMEGLRDGGQAVIVADAHSNISTFRLREE------- 1095

Query: 947  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 1006
                +E    + L E ++ FR GSL       DV   P +IF T++G +G++  L     
Sbjct: 1096 ----IETAATFGLHEDISVFRRGSLAPASSAEDVLS-PEIIFATIDGRLGIVGELTPSAA 1150

Query: 1007 LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 1056
              L+ LQ N+ + I+G G +    +R    E    D   F+DGD +++++
Sbjct: 1151 RTLDDLQRNMDRYIRGPGDIAWRSYRRAGTELVQRDTAGFIDGDFVQTYI 1200



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 6  YVVTAHKPTNVTHS-CVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
          Y+ +A  PT V  S  + NFTSP   +L++A+   +E+  +T +GL     +P++G IA 
Sbjct: 3  YIASALAPTPVLFSQAIDNFTSPSTSSLVVARPDWVEVSDITSEGLVYRCGLPVWGNIAG 62

Query: 65 LELFRPHG-EAQDFLFIATERYKFCVLQWDA 94
          LE     G +    + IA    +  +++++A
Sbjct: 63 LERATVEGAQPHIVVLIAPPNARLLLIRYNA 93


>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 1227

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 185/786 (23%), Positives = 346/786 (44%), Gaps = 81/786 (10%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDV 56
           M I+N  +T  + T +TH+  GNF++P+   +++A+   +E  LL P      +Q +L V
Sbjct: 1   MHIYN--LTLQRATAITHAIFGNFSAPKAQEIVVARGKVLE--LLRPNDFNGKVQTVLSV 56

Query: 57  PIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTD 116
            ++G I ++  FR  G+ +D++ + ++  +  +LQ++ E +               R   
Sbjct: 57  EVFGTIRSIVPFRLTGDTRDYIIVGSDSGRIVILQYNNERNTFDKIHQETFGKSGCRRIV 116

Query: 117 NGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YG 171
            GQ   +DP  R  +IG      L  ++  D+  +L  +  +   +   ++I  +    G
Sbjct: 117 PGQYLAVDPKGRAVMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTINIHMVGVDVG 176

Query: 172 CAKPTIVVLYQDNKDARHVKT---YEVALKDKDFVE---------GPWSQNNLDNGADLL 219
              P    L  D  D  H  T   +E   K+  F E           WS+  +D  A++L
Sbjct: 177 FENPIFATLEVDYADVDHDPTGKEFEALHKNLTFYELDLGLNHVVRKWSEP-VDITANML 235

Query: 220 IPVP-----PPLCGVLIIGEETIVYCSAN---AFKAIPIRPS--------ITKAYGRVDA 263
           + VP     P   GVL++GE  +V+ +        A+P R          I  A      
Sbjct: 236 VAVPGGSDGP--GGVLVMGENFVVWKNQGHQEVRAALPRRKILGEERSVLIVSATAHKQK 293

Query: 264 DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
           D    LL    G ++   +  E++ V+ +KI        ++ +  L    +++ + +G+ 
Sbjct: 294 DLFFILLQSEYGDIYKATLAWEEDNVSAIKINYFDTVPTSNAMCILKTGFLFVAAEFGNH 353

Query: 324 QLIKLN--------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG 363
            L +                        P    + + + E   +L PI+DF V D+ ++ 
Sbjct: 354 FLFQFQSIGDEEEESTMDQDEDEIPTFDPQPLKNLIAIDE-IESLAPIMDFKVADMVKEE 412

Query: 364 QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFI 422
             Q +T  G     SLR++++G+ + E A   L G    ++++R +  D +D++++VSF+
Sbjct: 413 TKQFLTLCGRGPRSSLRLLKHGLAVAEMADSPLPGNPNNIFTVRKNVADEYDSYIIVSFL 472

Query: 423 SETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE 482
           + T +L++   D +EE +  GF     TL       + LVQV    +R + S  R    E
Sbjct: 473 NATLVLSIG--DNVEEVKDAGFNENASTLNVGLVGDDSLVQVFPTGIRFIRSDKR--ITE 528

Query: 483 WKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIG 541
           W +P   ++  +  N  QV++A  GG L+Y E+   G L EV    +  +I+C+DI PI 
Sbjct: 529 WPTPARRTIVRSAINNKQVVIALTGGELLYFELDITGSLVEVGRKDMGRDIACIDIAPIP 588

Query: 542 ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGIS------ 594
           E    ++  AVG + + +VR+ SL   ++ +   +      P S+ +   +G +      
Sbjct: 589 EGRLRARFLAVGDYEN-TVRVLSLDPEDVFSSLAVQALPAPPESLCIVKMKGGTDSSAGT 647

Query: 595 -YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
            +L   L +G L   +L+  TGEL+D +   LG++P+ L      +   + A + R  + 
Sbjct: 648 LFLNIGLTNGVLQRTVLDKVTGELSDTRTRFLGSRPVRLLKLRVGDQPAMLALTSRAWLC 707

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLG 712
           Y+    L  + ++   + +   F S   P+ +       L I + + + +  H   IPL 
Sbjct: 708 YNYQLHLHLTPLSYPALDYASNFCSERCPEGMVATIGNALRIISPERLGEVFHQELIPLR 767

Query: 713 EHPRRI 718
             PR++
Sbjct: 768 YTPRKM 773



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 44/362 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 801
            VRLLD  T + I    LD  E   S  +C F D    ++  VGTA  L   P   +   G
Sbjct: 878  VRLLDVNTKQTIDVVELDNNEAAFSACTCVFHDRGGEIFLVVGTAKGLVLNPRSCD--AG 935

Query: 802  RILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
             I V+ + DG  +  L+ + + +G   ++  F G+LL  I + +++Y     D G R+L 
Sbjct: 936  YIHVYRLLDGGKRFSLVHKTQVEGVPTAVCGFQGRLLVGIGKMLRIY-----DLGKRKLL 990

Query: 860  SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
             +C + G    +  + T+G+ I+VGDL +S   + Y+  E  +   A D N  W++A ++
Sbjct: 991  RKCENKGFPHCIQSITTQGERIIVGDLAESFHFVKYRKAENQLNVYADDSNPRWLTASQM 1050

Query: 919  LDDDIYLGAENNFNLFTVRKNSEGATDEERG-----------------RLEVVGEYHLGE 961
            LD D   GA+   N+F VR  SE   + E                   +L+ +  +H+G+
Sbjct: 1051 LDYDTMAGADKFGNVFIVRLPSEVNEELEDNPMGNFLMSKQSLNGAAFKLQTLINFHVGD 1110

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVI 1020
             +N     SL         G    +++ T+ G +G ++  +  E   F   L+ ++R  +
Sbjct: 1111 TINSMTKASLF-------TGGADVLVYTTLMGGMGALLPFVSREDVDFFSHLEMHMRSEL 1163

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              + G +H  +RS+         K+ +DGDL E F  L   +   I++ ++ +  E+ K+
Sbjct: 1164 PPLCGRDHLAYRSY-----YFPVKDVIDGDLCEQFSLLPPEKQRTIAEELDRTPGEVLKK 1218

Query: 1081 VE 1082
            +E
Sbjct: 1219 LE 1220


>gi|134113697|ref|XP_774433.1| hypothetical protein CNBG0790 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50257071|gb|EAL19786.1| hypothetical protein CNBG0790 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1276

 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 222/912 (24%), Positives = 402/912 (44%), Gaps = 125/912 (13%)

Query: 238  VYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL- 296
            V+ S   F  + I  ++ + +G     G+  ++GD  G         EK    G    + 
Sbjct: 353  VWRSRQGFGTV-IAATVIEDHG----SGASVVIGDEYGAFTAFGWEFEKGSGAGTDGRVR 407

Query: 297  -----LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL--------------------- 330
                 LG +S  S+I+YLD++ +++ S+  DS L++L                       
Sbjct: 408  VLRTYLGASSPPSSITYLDSSHLFVSSAVADSVLLRLPKVESSSSVSSGKGKGRAVTSPI 467

Query: 331  ----------------QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAY 374
                            + D  G   E+LER++N+ P+ D CVV  E      +V  SGA 
Sbjct: 468  GDQADKWEVLYEIGKDRNDTDGGP-EILERWMNIAPVKDLCVVKDEGGNLSHLVLASGAS 526

Query: 375  KDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
            +  SLR+VR+G+G+ E  +++ L  ++ MW L  ST  P    L++S  + T  + + L+
Sbjct: 527  ESNSLRVVRSGVGLEELVTIQGLHDVQKMWPLTDSTAIPR---LLLS--TSTSTILLQLQ 581

Query: 434  DELEETEIEGFCSQTQTLFCHDAIYNQLV-QVTSGSVRLVSSTS-RELRNEWKSPPGYSV 491
             E+    I      ++TL        +L+ QVT   + L S  S  +L  + +      +
Sbjct: 582  PEISAIPITDVIFNSETLAAGILPGAELLAQVTPRGLSLWSDLSVGQLEAQVEVDKETEI 641

Query: 492  NVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENP------- 544
              A   A   ++A  GG LV   + +   +      ++ E+S + I+    +        
Sbjct: 642  VCAQVTADWAVVAKKGGSLVVFHVSNTGFSPQGTIDVKEEVSAVAISSSSGSSSPIIVIS 701

Query: 545  SYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGH 604
            +++    V M + IS  +  L     I  E     +  RS   C   G   LL  L +G 
Sbjct: 702  TWTAKTFVYMLSQISNGVDGLS----IQSESSATSLQLRSHPFCP--GGIQLLSGLDNGL 755

Query: 605  LLNFLLNM-KTGE-----LTDRKKVSLGTQPITLRTFSSKNTTHVFAA---SDRPTVIYS 655
            L  + LN  ++GE     +   K  SLG +P+ L    S +      +   ++R +VI+ 
Sbjct: 756  LHIYDLNTSESGEAEGLTVKSSKTTSLGLRPLVLHPCESTHGDEKVISVGLTERMSVIFE 815

Query: 656  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EH 714
            S  ++ +S+VN+K V      ++++ P     ++   L++  ++ ++KLH+++   G E 
Sbjct: 816  SKDRIEFSSVNIKNVMAATSVDTSSGPVFALFSRTSGLSLVKVNSLKKLHVQTCDTGNES 875

Query: 715  PRRICHQEQSRTFAICSLKNQSC--AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSIL 772
              ++ + ++ +  A  S +       +  E +FV++ D  + E +S++ L   E   S+ 
Sbjct: 876  ISKLTYMDEYKAIACGSTRRTQLRDGDVKEENFVQIRDGTSLEPLSSFSLRGRELVTSLR 935

Query: 773  SCSFSDDSNVYYCVGTAYVLPEENEPT-----------KGRILVFIVEDGK------LQL 815
            S   +    +Y  VGTA++ P++ E +           +GR+L+   ++G       +++
Sbjct: 936  SVFLT--GRIYLAVGTAFLPPDDGEDSSWDEGNLAVVREGRVLLLEFKEGDAGGGWDIKI 993

Query: 816  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ-SECGHHGHILAL--- 871
             AE  T GAVY+L   +G L  A   K+ +++    D    EL+ +      ++++    
Sbjct: 994  KAELATVGAVYALEEIHGFLAVAAGSKLTIHRL---DHNPVELEETSSWASAYVISSLSV 1050

Query: 872  ----YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD--DIYL 925
                +++  G  IV GD M+S+ +L     +G I +  R+   + ++A+ +L D  D  +
Sbjct: 1051 LPPSHIRPEGALIV-GDGMRSVIVLNVDEGDGMIYDDERNMATHGVTALGLLKDKGDGVV 1109

Query: 926  GAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
             ++   NL T R N          +LE    + L E V RF+ GSLV      ++  IP 
Sbjct: 1110 ISDAYSNLLTYRLNQ---------KLERAATFGLHEEVTRFQSGSLVPTTTAPEI-IIPD 1159

Query: 986  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            V+F T  G +G+I  L       L+ LQ N+ K+ KG G +    WR   +     D   
Sbjct: 1160 VLFATREGRLGIIGELGTRSSRTLDDLQRNMSKIWKGPGEVGWSNWRRAGSNLVGKDTAG 1219

Query: 1046 FLDGDLIESFLD 1057
            F+DGD ++ FLD
Sbjct: 1220 FVDGDFVQKFLD 1231


>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
 gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
          Length = 1221

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 276/1238 (22%), Positives = 512/1238 (41%), Gaps = 181/1238 (14%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPI-- 58
            M ++N  + A    N T   VG F+  ++  +I+AK +R+E  LL P      +D  +  
Sbjct: 4    MYLYNLTLQASGSVNAT--VVGQFSGTRQQEIIVAKGSRLE--LLRPDTQTGKVDTVLSH 59

Query: 59   --YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPT 115
              +G I +L  FR  G ++D++ + ++  +  +L++  +++ L  +   +   R G R  
Sbjct: 60   DAFGVIRSLAAFRLTGGSKDYVIVGSDSGRIVILEYQPKTNSL-EKVHQETFGRSGSRRI 118

Query: 116  DNGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIR-------LEELQVLDI 166
              GQ    DP  R  +IG      L  ++  D +  L  +  +        +  +  +D+
Sbjct: 119  VPGQYLATDPKGRATMIGAMEKAMLVYILNRDAQANLTISSPLEAHRPSAIIHHIVGVDV 178

Query: 167  KF---LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVE---------GPWSQNNLDN 214
             F   L+ C +    V Y D+      + +E A K   + E           WS+  +D 
Sbjct: 179  GFENPLFACLE----VDYSDSDHDPSGRAFEEAAKTLTYYELDLGLNHVVRKWSEP-VDP 233

Query: 215  GADLLIPVPPPL----------CGVLIIGEETIVYCSANAFK-AIPIRPSITKAYGRVDA 263
             ++LL+ VP              GVL+  E+ I Y   +  +  +PI   +       + 
Sbjct: 234  RSNLLVQVPGGYNQNLEKWDGPSGVLVCSEDYITYKHQDQPEHRVPIPKRLNPVEKLSER 293

Query: 264  DGSR--------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYL 309
             G+               +L+    G L  + + H+ +++  LKI+      +AS +  L
Sbjct: 294  RGTLIVASVLHKMKNAFFFLVQTEDGDLFKITMEHQDDEIRSLKIKYFDTVPVASGLVIL 353

Query: 310  DNAVVYIGSSYGDSQLIKLN------------------------------LQPDAKGSYV 339
             +  +++ S YG   L                                    P    + V
Sbjct: 354  RSGFLFVASEYGAQLLYSFQKLGDDDDLPEYISTDYDENGAGRRRPQLPTFTPRPLDNLV 413

Query: 340  EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 399
            +V E   +L PI+D   ++       Q+    G     S +++R+G+ + E  S +L G+
Sbjct: 414  QVDE-MPSLDPILDAKPLNPLAADSPQIFAACGRGARSSFKMLRHGLEVQEAVSSDLPGV 472

Query: 400  -KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 458
               +W+ + +  D +D+++++SF++ T +L++   + +EE    GF + + TL       
Sbjct: 473  PSAVWTTKITQQDEYDSYIILSFVNGTLVLSIG--ETIEEVSDSGFLTSSSTLAVQQLGQ 530

Query: 459  NQLVQVTSGSVRLVSSTSRELRNEWKSPP----GYSVNVAT-ANASQVLLATGGGHLVYL 513
            + L+QV    +R V    +++ NEW +P       +  VAT  N  QV++A     LVY 
Sbjct: 531  DALLQVHPHGIRHVL-VDKQI-NEWATPSLPNGRQTTIVATCTNERQVVVALSSNELVYF 588

Query: 514  EIG-DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 571
            E+  DG L E +  + +   +  + +    E    +   AVG   D +VRI SL   + +
Sbjct: 589  ELDMDGQLNEYQERKAMGAGVLTMSMPDCPEGRQRTPYLAVGC-DDSTVRIISLEPNSTL 647

Query: 572  TKEHLGGEIIPRSVLLCAFE----------GISYLLCALGDGHLLNFLLNMKTGELTDRK 621
                +     P S + C  E            +++   L +G LL  +L+  TG+LTD +
Sbjct: 648  ASISIQALTAPASSI-CMAEMLDATIDRNHATTFVNIGLQNGVLLRTILDAVTGQLTDTR 706

Query: 622  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 681
               LG++ + L          V A S R  + Y+   +L +  +    + H   F++   
Sbjct: 707  TRFLGSKAVRLIRTKVHGQAAVMALSTRTWLSYTYQDRLQFVPLIFDVLDHAWSFSAELC 766

Query: 682  PDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCA- 738
            P+ L       L I TI  +  KL   S+ L   PR+I  H  +   F +   ++++ + 
Sbjct: 767  PEGLIGIVGSTLRIFTIPSLASKLKQDSVALSYTPRKIANHPNEQGLFYVVEAEHRTLSP 826

Query: 739  -----------EESEMHFVRLLDDQTFEF------------------------ISTYPLD 763
                       +E + H   +LD    EF                             +D
Sbjct: 827  GAQRRRTEMLGKELKPHQRGVLDLNPAEFGAIRAEAGNWASCIRAVDGVQAQTTHRLEMD 886

Query: 764  TFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEK 819
              E   SI    F S +  V   VG+A  V+       K  +  + ++++G+ L+L+ + 
Sbjct: 887  DNEAAFSIAVVPFASAEKEVMLVVGSAVDVVLSPRSCKKAYLTTYRLLDNGRELELLHKT 946

Query: 820  ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGD 878
            E       L AF G+LLA I + +++Y     D G ++L  +C +     A+  +  +G 
Sbjct: 947  EVDDIPLVLRAFQGRLLAGIGKALRIY-----DLGKKKLLRKCENRSFPTAVVSLDAQGS 1001

Query: 879  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR- 937
             IVVGD+ +SI    YK  E  +   A D    +++   +LD D    A+   N++ +R 
Sbjct: 1002 RIVVGDMQESIIFASYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNIYVLRL 1061

Query: 938  -KNSEGATDEERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVI 987
              N+  + DE+   + +V       G  H    V  F  G ++  L  + +  G    ++
Sbjct: 1062 DGNTSRSVDEDPTGMTIVHEKPVLMGAAHKASLVAHFFVGDIITSLHRTAMVAGGREVLL 1121

Query: 988  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 1046
            +  ++G IG +   +  E    L  L+++LR+    + G +H  +RS     K+V     
Sbjct: 1122 YTGLSGSIGALVPFVSKEDVDTLSTLESHLRQENNSIVGRDHLAYRSSYAPVKSV----- 1176

Query: 1047 LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +DGDL E+F  LS  + + I+  ++    E+ K++ +L
Sbjct: 1177 IDGDLCETFGLLSPAKQNAIAGELDRKPGEINKKLAQL 1214


>gi|167539942|ref|XP_001741428.1| DNA repair protein xp-E [Entamoeba dispar SAW760]
 gi|165894130|gb|EDR22214.1| DNA repair protein xp-E, putative [Entamoeba dispar SAW760]
          Length = 1004

 Score =  186 bits (472), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 255/1114 (22%), Positives = 497/1114 (44%), Gaps = 160/1114 (14%)

Query: 9    TAHKPTNVTHSCVGNFTSPQELN---LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            T   P+ V+HS     T+   LN   L+++K   +E++ +   GL P+        I+ L
Sbjct: 13   TLINPSGVSHS----ITAQLNLNINYLVVSKLNLLELYEINSTGLIPLTTKRYSSGISLL 68

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
              ++P  +  D+L I T+  +  +L+    +  +I+   G + D  GR    G    I P
Sbjct: 69   LKYKPLKDITDYLIIVTQSNEIEILKLTTSALHIISS--GSLKDTFGRKAFFGVKAAISP 126

Query: 126  DCRLIGLHLYDGLFKVI--PFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            + +++ L+LY+ L KV+  P   K QL  A NI++    +LD+ F        + +L+++
Sbjct: 127  NNQILLLNLYEQLIKVVLLPQYPKDQLT-ASNIKVNHSHILDMTFCLLNDSYQLALLHEN 185

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
             +D RH+ TY +     +  +G ++Q N+ +    ++     + G+ +I +ET  Y + N
Sbjct: 186  KRDIRHIDTYTLN-SFNELEKGSFNQPNVGSNTSRILGFKDGIIGIFVISDETGCYFNGN 244

Query: 244  A---FKAIPIRPSITKAYGRVDA----DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL 296
                   +   P+    + + D     D  R L      L   + I++E  +VT  +   
Sbjct: 245  GKHILCNLNQYPNTACCFIKKDVLIMTDSKRNL----DTLEFKVNISNEIIEVTKKQAPK 300

Query: 297  LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCV 356
            L + SI+STIS L N +++IGS  GD+ ++ LN +         +LE++ N G ++D   
Sbjct: 301  LLQ-SISSTISDLSNQILFIGSLNGDNLIMNLNGK---------ILEKWSNFGSLMD--- 347

Query: 357  VDLERQ--GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
                RQ   +   +        GS+ ++  G GI E  + E+ GIK + S+  ++     
Sbjct: 348  ---ARQISNREDYLVAGNGGGKGSIGLMIKGSGIEELGACEIDGIKSIESIEYNS----K 400

Query: 415  TFLVVSFISETRILAMNLED---ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             +++V F  E+ I  ++ +    ++EE+ ++    + + + C   I  +L+ V    +  
Sbjct: 401  KYVIVGFEEESNIWEIHQKSKHIKIEESLLKKIIGKERVICC-GIIKERLIFVCKKGIYS 459

Query: 472  VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
            +    +  +N       +  +    N  Q +    G  L   +I + +  + K   LE  
Sbjct: 460  IDKHQK--KNTLMKFDSFITHAKFIN--QQIYFIYGTEL--FKINEELKIQ-KMKDLEQN 512

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE 591
            +SC D N         +I  +G+W D S+ IF   D+N + K+    + I RSVL+   +
Sbjct: 513  VSCFDAN---------EIIVIGLW-DGSILIF---DINGVLKKTEVVDTIGRSVLIDNNK 559

Query: 592  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL---GTQPITLRTFSSKNTTHVFAASD 648
               Y+ C   D  ++ FL +    +   + K+      +Q + L+   S           
Sbjct: 560  --IYVGC---DNEIIIFLYHQMEEDCKYKNKLKYQVEASQSVKLKKLYS----------- 603

Query: 649  RPTVIYSSNKKLLYSNVNL-----KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 703
             P V+  +NK   +    L     +++  +C     A+   +  A +  +  G + ++ +
Sbjct: 604  IPCVV--ANKTFTFQQTGLVPLAVEDLIDICESPVGAY--GIICATKRGIVFGLMKEMSR 659

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLD 763
            +  + I  GE+  +I   + SR   +             +  + L+D        ++ + 
Sbjct: 660  VTFKMIHSGENCCKIA-TDGSRGLIV----------GKTIKSINLVD-------GSFGVT 701

Query: 764  TFEYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE-DGKLQLIAEKET 821
            T E   + L+ C  S + N+ Y VGTA +   E EP+ GRIL+   + +G + ++  ++ 
Sbjct: 702  TVELKSNELALCVDSLEDNI-YAVGTAIIRENEIEPSSGRILLIRQDSEGLIYIVGTEDY 760

Query: 822  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 881
             GAVY L  +   ++A IN+ + + +   +D  T++          ++ + +    D+I+
Sbjct: 761  DGAVYCLKKYQKGIVAFINRNVHVIEKKGKDLSTKQ-----NMLLPLIGVSLDICKDYII 815

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRK 938
             GDL +S+S+  Y+++   ++   +D    W S V  ++ +    +L A+ + N+     
Sbjct: 816  AGDLARSVSVYRYRNDIEHLDIVGKDNQIVWSSCVGSIESEYGTSFLVADVSGNIKIFNS 875

Query: 939  NSEG-ATDEERGRLEVVGEYHLGEFVN----RFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
            N E   TD+E  ++ ++ + H+ + +N     F  G L+                G V+G
Sbjct: 876  NEEEPKTDDE--KINLISQVHIADSINFIQKSFYKGCLM----------------GGVHG 917

Query: 994  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
             I  I  +  EQYLFL+K+Q+ L K            WR   N ++T    N +DGD IE
Sbjct: 918  GIYNICEISKEQYLFLDKIQSKLVK----------PNWRESVNTQQTNPMMNCIDGDKIE 967

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            S L+ S  +   +++ + V  +E+ ++++ L  L
Sbjct: 968  SVLEWSEKKQILLAQKIGVEYQEMIEKIQSLFSL 1001


>gi|410926437|ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
            rubripes]
          Length = 1020

 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 235/1043 (22%), Positives = 429/1043 (41%), Gaps = 143/1043 (13%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T  + T +TH+  GNF+  +   +++++   +E  LL P      +  +L + ++G 
Sbjct: 4    YNITLQRSTGITHAIHGNFSGTKMQEIVVSRGKILE--LLRPDANTGKVHTLLTMEVFGI 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I +L  FR  G  +D++ I ++  +  +L++   S  +  +   +   + G R    GQ 
Sbjct: 62   IRSLMAFRLTGGTKDYIVIGSDSGRIVILEYHT-SKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 241  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L     G +  + +  ++E VT ++++      +A+ +  L    +++ S +G+
Sbjct: 296  KSMFFFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                          QP    + V V E+  +L PI+   + D
Sbjct: 356  HYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQE-SLSPIMSCQIAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W++R   +D FD ++
Sbjct: 415  LANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C       LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDEALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+
Sbjct: 533  --VNEWKTPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEG 592
             +  +      S+  AVG+  D +VRI SL     L  ++ + L  +  P S+ +    G
Sbjct: 591  SLANVPPGEQRSRFLAVGL-ADNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGG 647

Query: 593  IS--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +               YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 648  VEKQDELGEKGSMGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + + +   F S   P+ +       L I  +
Sbjct: 708  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 767

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQE-----------QSRTFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E            + T A  + + Q  AEE     
Sbjct: 768  EKLGAVFNQVAFPLQYTPRKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAA 827

Query: 741  --------SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
                    +EM     L++   E I   P        S++        N    V    V 
Sbjct: 828  GEDERELAAEMA-AAFLNENLPEAIFGAPKAGAGQWASLVRL-----INPIQGVTLDQVQ 881

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
             E+NE         +    KL+ + +   + A  ++  F G++L  + + +++Y     D
Sbjct: 882  LEQNEAAFXXXXRLVSGGEKLEFVHKTPVEDAPLAIAPFQGRVLVGVGKLLRIY-----D 936

Query: 853  DGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
             G ++L  +C  + HI  +   + T G  ++V D+ +S+  + Y+  E  +   A D   
Sbjct: 937  MGKKKLLRKC-ENKHIPNVVTSIHTSGQRVIVTDVQESLFWVRYRRNENQLIIFADDTYP 995

Query: 911  NWMSAVEILDDDIYLGAENNFNL 933
             W++   +LD D    A+   N+
Sbjct: 996  RWVTTACLLDYDTMASADKFGNI 1018


>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 187/807 (23%), Positives = 355/807 (43%), Gaps = 93/807 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIY 59
           ++ Y +T  + T +  +  GNF+  +   +++A+   ++  LL P     +Q +L V I+
Sbjct: 1   MYLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLD--LLRPDENGKIQTILSVEIF 58

Query: 60  GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
           G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   + G R    G
Sbjct: 59  GAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKN-VFDKIHQETFGKSGCRRIVPG 117

Query: 119 QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
           Q   IDP  R  +IG      L  V+  D   +L  +  +   +   +         G  
Sbjct: 118 QYLAIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTIVYSITGVDCGFD 177

Query: 174 KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
            P    +  D  +A             +H+  YE+ L   + V   WS+  +DNGA++L+
Sbjct: 178 NPIFAAIELDYSEADQDSTGQAASEAQKHLTFYELDLG-LNHVSRKWSEQ-VDNGANMLV 235

Query: 221 PVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGR--VDADGSR----- 267
            VP       GVL+  E  ++Y +    +    IP R  +    G   V A   R     
Sbjct: 236 TVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMF 295

Query: 268 -YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
            +LL    G +  + + HE ++++ LKI+      + S++  L +  ++  S +G+  L 
Sbjct: 296 FFLLQTEYGDVFKVTLEHENDRISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLY 355

Query: 327 KLN--------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
           +                             QP    + V + ++  +L PI+D  V +L 
Sbjct: 356 QFQAIGDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRI-DQVESLMPIMDMKVSNLF 414

Query: 361 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVV 419
            +   Q+    G     S+RI+R G+ I+E A  +L G+   +W+++ + +D FD ++VV
Sbjct: 415 EEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVV 474

Query: 420 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
           SF + T +L++   + +EE    GF   T +L       + L+QV    +R +    R  
Sbjct: 475 SFANATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGR-- 530

Query: 480 RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDIN 538
            NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI 
Sbjct: 531 INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIA 590

Query: 539 PIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS- 594
           P+ E    S+  AVG + D ++RI SL PD  + +++ + +     P S+L    +    
Sbjct: 591 PVPEGRQRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLLFLEVQASVG 647

Query: 595 -----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
                      +L   L +G L   +++M TG+L+D +   LG +   L +   +    +
Sbjct: 648 GEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRRAM 707

Query: 644 FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-Q 702
              S RP + Y      L + ++ + +     F+S    + +       L + TI+ + +
Sbjct: 708 LCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGE 767

Query: 703 KLHIRSIPLGEHPRRICHQEQSRTFAI 729
             +   IPL   PR+   Q + +   +
Sbjct: 768 TFNETVIPLRYTPRKFVLQPKRKLLVV 794



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 168/370 (45%), Gaps = 54/370 (14%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGR 802
            +R+LD +T        L   E   SI + +F D +      VGTA  L    +     G 
Sbjct: 863  IRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTAKSLQFWPKRSFDAGY 922

Query: 803  ILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 860
            I ++  +EDGK L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  
Sbjct: 923  IHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DLGKRRLLR 977

Query: 861  ECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
            +C +      I++++  T  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 978  KCENKLFPNTIVSIH--TYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASY 1035

Query: 918  ILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHL 959
             +D D   GA+   N++ VR                  K  +G  +    ++E + ++H+
Sbjct: 1036 HIDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 1095

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRK 1018
            G+ V   +  SL+        G    +I+GTV G +G ++A    +   F   L+ ++R+
Sbjct: 1096 GDVVTCLQKASLI-------PGGGECIIYGTVMGSLGALLAFTSRDDVDFFSHLEMHMRQ 1148

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSV 1074
                + G +H  +RS          K+ +DGDL E F    LDL R   DE+ +T     
Sbjct: 1149 EHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG--- 1200

Query: 1075 EELCKRVEEL 1084
             E+ K++EE+
Sbjct: 1201 -EILKKLEEV 1209


>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM 1558]
          Length = 1214

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 281/1237 (22%), Positives = 512/1237 (41%), Gaps = 182/1237 (14%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNF--TSPQELNLIIAKCTRIEI-HLLTPQG-LQPMLDV 56
            M ++N  +T   PTNVT + VG+F  T  QE+ L++   TR+EI  L T  G L  +   
Sbjct: 1    MHLFN--ITLQPPTNVTLAAVGSFSGTKGQEI-LVVRGGTRLEILKLNTSTGQLDTICTA 57

Query: 57   PIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPT 115
              +G + ++  FR  G  +D++ ++++  +  ++++    +        +V  + G R  
Sbjct: 58   EAFGTVRSVAGFRLAGMTKDYILLSSDSGRMSIIEFVVTPTPHFESLYQEVFGKSGSRRV 117

Query: 116  DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
              GQ   +DP  R   +     L  V+  +++G+L  +  +   +   L    +    G 
Sbjct: 118  VPGQFLAVDPKGRSC-MFAASKLVYVLNRNSEGKLFPSSPLEAHKNHALITHVIGVDQGY 176

Query: 173  AKPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLL 219
              P    L  D  ++             +H+  YE+ L     V   WS+   D  A+LL
Sbjct: 177  DNPLYAALEVDYSESDEDPTGAAFEAAEKHLVFYELDLGLNHVVRK-WSEPT-DRRANLL 234

Query: 220  IPVP------------PPLCGVLIIGEETIVYCSANA-FKAIPI---------RPSITKA 257
            + VP            P   GVL+  E+ +++   +A    +PI         R  I++ 
Sbjct: 235  VQVPGGQNATSDRFEGP--SGVLVCCEDHVIWKHMDAEAHRVPIPRRRNPLAQRGEISRG 292

Query: 258  YGRVDADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDN 311
               V A   +      +LL +  G L+ L I H+ E V  +KI+      +++++  L +
Sbjct: 293  MIIVSAVMHKIRGAFFFLLQNEDGDLYKLWIDHQGEDVVAVKIKYFDTVPVSNSLCILKS 352

Query: 312  AVVYIGSSYGDSQLIKL-NLQ-------------PDAKGSYVEVLERYVN---------- 347
              ++  S +GD  L +  NL              PD   +   +   + N          
Sbjct: 353  GYLFAASEFGDQNLYQFQNLAEDDDEQEWSSTDYPDNGNTTGALPYAFFNPRPLQNLLLV 412

Query: 348  -----LGPIVDFCVVDLERQGQG--QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 399
                 L PI+D  VV+L  Q     Q+    G     + R +++G+ I +  +  L G+ 
Sbjct: 413  DTLSSLDPILDAQVVNLLGQSSDTPQIYAACGRGPRSTFRTLKHGLEIQQIVASPLPGVP 472

Query: 400  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 459
              +W+L+ + +D FD+++V+SF + T +L++   + +EE    GF S   TL        
Sbjct: 473  NAVWTLKLTEEDEFDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGDA 530

Query: 460  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DG 518
             L+QV    +R + +  R   +EW  PPG ++  AT N  QV++A     LVY E+  +G
Sbjct: 531  GLLQVHPYGLRHIRAADRV--DEWACPPGSAITAATTNKRQVVIALSTAELVYFELDPEG 588

Query: 519  ILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 576
             L+E +  + L    +C+ I  + E    +   AVG   + +V + SL P+  L T    
Sbjct: 589  SLSEYQDKKSLPGNATCVSIAEVPEGRRRTPFLAVGC-DNQTVHVISLEPESTLTTLSLQ 647

Query: 577  GGEIIPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
                 P S+ L      S        +L   L +G LL  +++   G L+D +   LG +
Sbjct: 648  ALTAPPASICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVEGSLSDTRLRFLGAK 707

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P  L   S   +  V A S R  ++Y+    L    +    + +    ++A  P+ L   
Sbjct: 708  PPKLVRSSIHGSPSVMAFSSRAWLLYTYQDMLQTQPLIYDALEYASTLSAAMCPEGLIGI 767

Query: 689  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-------------AICSLKN 734
                L I TI  + +KL   S+ L   PR+      S  F             AI  + +
Sbjct: 768  SGNTLRIFTIPRLGEKLKQDSMSLTYTPRKFISHPFSTIFYMIESDHRVLGPKAIQRIVS 827

Query: 735  QSCAEESEM-----------------------HFVRLLDDQTFEFISTYPLDTFEYGCSI 771
            Q  A    +                         +R+LD  T + +ST  LD  E   S+
Sbjct: 828  QKKAAGDRVDGSILELPPSEFGRPRAGPGHWASLIRILDPLTNQTVSTIELDEDEAAFSL 887

Query: 772  LSCSFSDDSN-VYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYS 827
                F + +      VGTA          K G + V+ I E+G+ L+ + + +       
Sbjct: 888  TIAYFENMAGEPSLVVGTAVKTTLTPRGCKEGWLRVYAIKENGRTLEFMHKTKLDEIPLC 947

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLM 886
            +  F G LL    + ++LY     + G + L  +C ++     +  +   G  I+VGD+ 
Sbjct: 948  VAGFQGYLLVGAGKSLRLY-----EAGKKALLRKCENNSFPTVIATINVIGARIIVGDMQ 1002

Query: 887  KSISLLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN-- 939
            +S    +Y+    +I  R       D    +++ V  +D D     +   N+F  R +  
Sbjct: 1003 ESTFFCVYR----SIPTRQLLVFGDDTQPRFLTCVTNVDYDTVACGDKFGNVFVNRMDQA 1058

Query: 940  -SEGATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----TVIF 988
             SE   D+  G      +  ++G  H    +  ++ GS+V  L  + V  +P     +++
Sbjct: 1059 VSEKVDDDPTGAGILHEKGFLMGAAHKTTLIAHYQVGSVVTSL--TKVSLVPGGRDVLVY 1116

Query: 989  GTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
             T++G +G +   +  +   F+  L+ ++R     + G +H  +R +      V     +
Sbjct: 1117 TTISGAVGALVPFISMDDVEFMTTLEMHMRSQNISLVGRDHLAYRGYYAPVMGV-----V 1171

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL +++  L  T+   I+  ++ SV ++ K++E++
Sbjct: 1172 DGDLCDAYSSLPYTKQSSIANELDRSVGDVLKKLEQM 1208


>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
          Length = 1213

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 268/1241 (21%), Positives = 500/1241 (40%), Gaps = 199/1241 (16%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
            Y +T  + + + ++  GNF+  +   + +++   +E+    P    + P+    ++G I 
Sbjct: 4    YQLTLQRSSAIYNAVHGNFSGTKLQEIAVSRGKVLELLRPDPNTGKVHPLFATEVFGVIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             L  FR  G         T+  K  +   D  ++ L         D   R    GQ    
Sbjct: 64   DLMAFRLTG--------GTKVNK--LFDKDTVANHLYLNKFIANRDFGCRRIVPGQYLAA 113

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-----YGCAKPTIV 178
            DP  R I +   +    V   +   Q +   +  LE  +  ++ F       G   P   
Sbjct: 114  DPKGRAIMIGAIEKQKFVYILNRDAQARLTISSPLEAHKSHNVVFHIVGIDVGFENPMFA 173

Query: 179  VLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP---P 224
             L  D ++A    T E A   +    F E     N+        L+  A++LI VP    
Sbjct: 174  CLELDYEEADVDHTGEAAQAAQQTLTFYELDLGLNHVVRKYSEPLEEFANMLISVPGGND 233

Query: 225  PLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------------- 267
               GV++  E  + Y   N      IR  I +    +D D  R                 
Sbjct: 234  GPSGVIVCSENYLTY--KNFGDQRDIRCPIPRRKNDLD-DNERSMIFVCTATYKTKSMFF 290

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +L+    G +  + +  E++ VT ++++      +AS +  L    ++  S +G+  L +
Sbjct: 291  FLVQSEQGDIFKVTLETEEDMVTEIRVKYFDTIPVASALCVLKTGFLFAASEFGNHALYQ 350

Query: 328  L------NLQPDAKG-------------------SYVEVLERYVNLGPIVDFCVVDLERQ 362
            +      + +P+                        + +++   +L PI+   V DL  +
Sbjct: 351  ITHLGDDDEEPEFSSLMATELDEGETFFFHARDLQNLVLVDEMESLAPIMHCQVADLANE 410

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
               Q+    G     SLR++R+G+ ++E A  EL G    +W+++ ++ D  D ++VVSF
Sbjct: 411  DTPQLYAACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNSVWTVKKNSTDEQDAYIVVSF 470

Query: 422  ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
            ++ T +L++   + +EE    GF   T TL C     + L+Q+    +R + S  R   N
Sbjct: 471  VNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALLQIYPDGIRHIRSDRR--VN 526

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINP 539
            EWK+P   ++     N  Q+++A  G  LVY E+   G L E  +  ++  ++ C+ + P
Sbjct: 527  EWKTPGKKNIIQCAVNERQIVIALTGNELVYFELDQSGQLNEYTERKEMSADVVCMALGP 586

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS-VLLCAFE------- 591
            +      S+  AVG+  D +VRI SL   + +  E L  + +P +   LC  E       
Sbjct: 587  VHAGEQRSRFLAVGL-IDNTVRIISLDPNDCL--EPLSMQALPAAGESLCIIEMGGTEVG 643

Query: 592  --------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
                    G  +L   L +G LL  +L+  TG+L+D +   LG++P+ L    +   + V
Sbjct: 644  EKGTAGNAGGLFLNIGLANGVLLRTVLDSVTGDLSDTRIRYLGSKPVKLFNVKTYGCSSV 703

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 703
             A S R  + Y+   +   + ++ + + +   F S   P+ +       L I  ++ +  
Sbjct: 704  LAMSSRTWLSYTYQSRFHLTPLSYESLEYASSFASEQCPEGIVAISSNTLRILALEKLGA 763

Query: 704  LHIR-SIPLGEHPRRIC--------------HQEQSRTFAI-------------CSLKNQ 735
            +  + + PL   PR+                H   ++TF +             C   ++
Sbjct: 764  VFNQVTTPLDFTPRKFVVDHKSHTLIMIETDHNAMTKTFKLDRKQRIAEEMVESCGDNDE 823

Query: 736  SCAEES------------EMHF-------------VRLLDDQTFEFISTYPLDTFEYGCS 770
            + A ES            E+ F             VR++D    E      L+  E   S
Sbjct: 824  ARAAESQVAANFLNTDIPEIQFGAPKAGIGRWASIVRIMDPIRSETHHEIQLEQDEAAFS 883

Query: 771  ILSCSFSDD-SNVYYCVGTAYVL---PEENEPTKGRILVFIVED-GKLQ--LIAEKETKG 823
            +    F++   + +  VG A  +   P  ++            D G++Q  L+ +     
Sbjct: 884  VCLTEFANQPGDRFVIVGCATKMILNPHSSQSCSIHTYQLYQNDRGRMQLELLHKTPVDD 943

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVV 882
               +L +F G+LL  + + +++Y     D G ++L  +C +         + T G  I+V
Sbjct: 944  IPGALCSFQGRLLVGVGRILRIY-----DLGKKKLLRKCENKKVSTFITGIDTIGYRIMV 998

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 942
             D+  S   L YK ++  +   A D N  +++   ++D D   GA+   N+F VR  ++ 
Sbjct: 999  HDIQDSFHFLKYKRKDNQLVLFADDVNKRFLTCGCLVDYDTMAGADKFGNIFFVRLPADV 1058

Query: 943  ATDEE-----------RGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
              D E           RG L       +VV  YH+GE     +  +L+        G   
Sbjct: 1059 KDDIEEDPTGVKALWDRGLLNGASQKADVVSVYHIGETALSLQKATLI-------PGGSE 1111

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            ++++ TV+G IG++      E   F + L+ ++R+    + G +H  +RS          
Sbjct: 1112 SLVYTTVSGGIGMLVPFTSREDIDFFQHLEMHMRQDSPPLCGRDHLWFRS-----SFSSV 1166

Query: 1044 KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            KN +DGDL E F  L   +   I++ ++ +  E+ K++E++
Sbjct: 1167 KNCVDGDLCEQFNSLEYAKRKAIAEELDRTPAEVSKKLEDI 1207


>gi|407034933|gb|EKE37449.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
          Length = 995

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 257/1113 (23%), Positives = 483/1113 (43%), Gaps = 158/1113 (14%)

Query: 9    TAHKPTNVTHSCVGNFTSPQELN---LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            T   P+ V+HS     T    LN   L+++K   +E++ +   GL P+        I  L
Sbjct: 4    TLINPSGVSHSITAQLT----LNINYLVVSKLNLLELYEINSTGLIPLTTKRYSSGITLL 59

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
              ++P  +  D+L + T+  +  +L+    +  +I+   G + D  GR    G   +I P
Sbjct: 60   LKYKPLKDITDYLIVVTQSNEIEILKLTTSALHIISS--GSLKDTFGRKAFFGVKAVISP 117

Query: 126  DCRLIGLHLYDGLFKVI--PFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            + +++ L+LY+ L KV+  P   K QL  A NI++    +LD+ F        + +L+++
Sbjct: 118  NNQILLLNLYEQLIKVVLLPQYPKDQLT-ASNIKVNHSHILDMTFCLLNDSYQLALLHEN 176

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
             +D RH+ TY +     +  +G +SQ N+      ++     + G+ +I +E   Y + N
Sbjct: 177  KRDIRHIDTYTLN-SFNELEKGSFSQPNVGPTTSRIVGFKDGIIGIFVISDEIGCYFNGN 235

Query: 244  A---FKAIPIRPSITKAYGRVDA----DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL 296
                   +   P+    + + D     D  R L      L   + I +E  ++T  +   
Sbjct: 236  GKHILCNLNQYPNTACCFIKKDVLIMTDSKRNL----DTLEFKVNINNEIIEITKKQSPK 291

Query: 297  LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCV 356
            L + SI+STISYL N +++IGS  GD+ ++ LN +         +LE++ N G ++D   
Sbjct: 292  LLQ-SISSTISYLSNKILFIGSLNGDNLIMNLNGK---------ILEKWSNFGSLMD--A 339

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTF 416
              +  +    VV   G      L I   G GI E  S E+  IK + S+          +
Sbjct: 340  RQISNREDYLVVGNGGGKGSIGLMI--KGSGIEELGSCEINDIKSVESIEYDRK----KY 393

Query: 417  LVVSFISETRILAMNLEDE---LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            ++V F  E+ I  ++ + +   +EE+ ++    + + + C   I  +L+ V    +  + 
Sbjct: 394  VIVGFEEESNIWEIHQKSKHIKIEESSLKKVIGKERVMCC-GIIKERLIFVCKKGIYSID 452

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               +  +N       +  +    N  Q +    G  L   +I + +  + K    E  +S
Sbjct: 453  KHQK--KNTLMKFDSFITHAKFIN--QQIYFIYGTEL--FKITEELKIQ-KMKDFEQNVS 505

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            C DIN         +I  +G+W D S+ IF   D+N I K+    + I RS+L+      
Sbjct: 506  CFDIN---------EIIVIGLW-DGSILIF---DINGILKKTEVVDTIGRSILI--DHNK 550

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSL---GTQPITLRTFSSKNTTHVFAASDRP 650
             Y+ C   D  ++ FL N    + T + K+      +Q I L+   S            P
Sbjct: 551  IYVGC---DNEIIVFLYNQMEEDCTYKNKLKYHIETSQSIKLKKIYS-----------IP 596

Query: 651  TVIYSSNKKLLYSNVNL-----KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 705
             VI  +NK   +    L     +++  +C   S      +  A +  +  G + ++ ++ 
Sbjct: 597  CVI--ANKTFTFQQTGLVPLAVEDLIDICE--SPVGDYGVICATKRGIVFGLMKEMSRVT 652

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 765
             + I  GE+  +I            ++K+           + L+D        ++ + T 
Sbjct: 653  FKMIHSGENCCKIATDGSYGLLVGKTIKS-----------INLID-------GSFGVTTI 694

Query: 766  EYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE-DGKLQLIAEKETKG 823
            E   + L+ C  S + N+Y  VGTA +   E EP+ GRIL+   + +G + ++  ++  G
Sbjct: 695  ELKSNELALCVDSLEDNIY-AVGTAIIRENEIEPSSGRILLIRQDTEGLIYIVGTEDYDG 753

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 883
            AVY L      ++A IN+ + + +   +D  T++          ++ + +    D+I+ G
Sbjct: 754  AVYCLKKCQKGIVAFINRNVHVIEKKGKDLNTKQ-----NMLLPLIGVSLDICKDYIIAG 808

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI---YLGAE--NNFNLFTVRK 938
            DL +S+S+  Y+++   ++   +D    W S V  ++ +    +L A+   N  +F    
Sbjct: 809  DLARSLSVYRYRNDIEHLDVVGKDNQIVWSSCVGSIESEYGTSFLVADVSGNIKIFN-SD 867

Query: 939  NSEGATDEERGRLEVVGEYHLGEFVN----RFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
              E  TD+E+  + ++ + H+ + +N     F  G L+                G V+G 
Sbjct: 868  EEEPKTDDEK--ISLISQVHVADSINFIQKSFYKGCLM----------------GGVHGG 909

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            I  I  +  E YLFL K+Q+ L K            WR   N ++T    N +DGD IES
Sbjct: 910  IYNICEISKEHYLFLNKIQSKLVK----------SNWRESVNTQQTSPMMNCIDGDKIES 959

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             L+ S  +   +++ + V  +E+ ++++ L  L
Sbjct: 960  ILEWSEKKQMLLAQKIGVEHQEMIEKIQSLFSL 992


>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1218

 Score =  182 bits (462), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 289/1244 (23%), Positives = 499/1244 (40%), Gaps = 204/1244 (16%)

Query: 8    VTAHKPTNVTHSCVGNFTSPQELNLIIAKC-TRIEIHLL--TPQGLQPMLDVPIYGRIAT 64
            +T   PTNV+ + VG+F+  +   ++  +  T++EI  L  T   L  ++    +G I  
Sbjct: 6    LTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAFGTIRN 65

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
            +  FR  G  +D++   ++  +  +L++    +        +V  + G R    GQ   +
Sbjct: 66   IAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESLYQEVFGKSGSRRIVPGQFLAV 125

Query: 124  DPDCR--LIG-----LHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            DP  R  L+G     + +   L  V+  + +G+L  +  +   +   L    +    G  
Sbjct: 126  DPKGRSCLVGSLENAIAVRTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHIVGVDQGYD 185

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             P    L  D  ++             +H+  YE+ L     V   WS+   D  A+LL+
Sbjct: 186  NPLYAALETDYSESDQDSTGEAYENTQKHLTFYELDLGLNHVVRK-WSEPT-DRRANLLV 243

Query: 221  ---PVP------------PPLCGVLIIGEETIVYCSANA-FKAIPIRPSITKAYGRVDAD 264
                VP            P   GVL+  E+ I++   +     IPI         R   D
Sbjct: 244  QALKVPGGQNANSDRFEGP--SGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLVQR--GD 299

Query: 265  GSR-----------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTIS 307
             SR                 +LL    G L+ + I H  E V  LKI+      +A+++ 
Sbjct: 300  KSRGLIIVSAVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLC 359

Query: 308  YLDNAVVYIGSSYGDSQLIKLNLQPDAKG-------SYVE-------------------- 340
             L    +Y+ S + D  L +     +  G        Y E                    
Sbjct: 360  ILKRGYIYVASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRN 419

Query: 341  --VLERYVNLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL 396
              +++   +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L
Sbjct: 420  LLLVDTVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPL 479

Query: 397  QGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 455
             G+   +W+L+ + D       V+SF + T +L++   + +EE    GF S   TL    
Sbjct: 480  PGVPTNVWTLKLTED-------VLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQ 530

Query: 456  AIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 515
                 L+QV    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+
Sbjct: 531  LGNAGLLQVHPYGLRHIRAADRV--DEWPAPPGQTIVAATTNRRQVVIALSTAELVYFEL 588

Query: 516  G-DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLIT 572
              +G L+E +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T
Sbjct: 589  DPEGSLSEYQEKKALPGNATCVTIAEVPEGRRRTSFLAVGC-DNQTVSIISLEPDSTLDT 647

Query: 573  KEHLGGEIIPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
                     P S+ L      S        +L   L +G LL  +++   G L+D +   
Sbjct: 648  LSLQALTAPPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRF 707

Query: 625  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
            LG +P  L   + +    V A S R  ++Y+    L    +    + +    ++A  PD 
Sbjct: 708  LGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDG 767

Query: 685  LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQS---------RTFAICSLK 733
            L       L I  I  + +KL   S  L   PR+ I H   S         RT++  +++
Sbjct: 768  LIGISGNTLRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIE 827

Query: 734  NQSCAEESE--------------------------MHFVRLLDDQTFEFISTYPLDTFEY 767
                 +ESE                             VR+LD    E I T  LD  E 
Sbjct: 828  RIVKQKESEGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTLDLDEDEA 887

Query: 768  GCSILSCSFS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKG 823
              SI    F       +  VGT      + +  K G + V+ I E G+ L+ + + +T  
Sbjct: 888  AFSIAIAYFERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRILEFLHKTKTDD 947

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVV 882
                L  F G LLA I + ++LY+      G + L  +C ++G   A+  +  +G  I+V
Sbjct: 948  IPLCLAGFQGFLLAGIGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIV 1002

Query: 883  GDLMKSISLLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 937
            GD+ +S    +Y+    +I  R     A D    W++ V  +D +     +   N+F  R
Sbjct: 1003 GDMQESTFYCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINR 1058

Query: 938  KN---SEGATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-- 986
             +   SE   D+  G      +  ++G  H  E +  +  GS+V     + + +IP V  
Sbjct: 1059 LDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVV-----TSITKIPLVAG 1113

Query: 987  -----IFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 1040
                 ++ T++G +G +   +  +   F+  L+ ++R     + G +H  +R +      
Sbjct: 1114 GRDVLVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISLVGRDHIAYRGY-----Y 1168

Query: 1041 VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            V  K  +DGDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1169 VPIKGVVDGDLCESFSLLPYPKQQAIALDLDRSVGDVLKKLEQM 1212


>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
          Length = 1101

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 256/1124 (22%), Positives = 461/1124 (41%), Gaps = 197/1124 (17%)

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ 
Sbjct: 2    IRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQF 60

Query: 121  GIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 61   LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 120

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 121  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 180

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 181  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 235

Query: 268  ---------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGS 318
                     +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S
Sbjct: 236  KSMFLSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVAS 295

Query: 319  SYGDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDF 354
             +G+  L ++                          QP    + V +++   +L PI+ F
Sbjct: 296  EFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-F 353

Query: 355  C-VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDP 412
            C + DL  +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D 
Sbjct: 354  CQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDE 413

Query: 413  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
            FD +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R +
Sbjct: 414  FDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHI 471

Query: 473  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEY 530
             +  R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  
Sbjct: 472  RADKR--VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSA 529

Query: 531  EISCLDIN--PIGENPS-YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVL 586
            ++ C+ +   P GE  S +  + AVG+  D +VRI SL   + +  + L  + +P +   
Sbjct: 530  DVVCMSLANVPPGEQRSRFLAVLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPES 586

Query: 587  LCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
            LC  E                G  YL   L +G LL  +L+  TG+L+D +   LG++P+
Sbjct: 587  LCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPV 646

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     +    V A S R  + YS   +   + ++ + +     F S   P+ +     
Sbjct: 647  KLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIST 706

Query: 691  GELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSC 737
              L I  ++ +  +  + + PL   PR+ + H E +            T A  + + Q  
Sbjct: 707  NTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQM 766

Query: 738  AEE-------------SEM-------------------------HFVRLLDDQTFEFIST 759
            AEE             +EM                           +R+++      +  
Sbjct: 767  AEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDL 826

Query: 760  YPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQL 815
              L+  E   S+  C FS+  + +Y  VG A  L        G  +    +V +G KL+ 
Sbjct: 827  VQLEQNEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEF 886

Query: 816  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY--- 872
            + +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y   
Sbjct: 887  LHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISG 939

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            +QT G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N
Sbjct: 940  IQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGN 999

Query: 933  LFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMR 974
            +  VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+  
Sbjct: 1000 ICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-- 1057

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLR 1017
                  G   ++++ T++G IG++     HE + F + ++ +LR
Sbjct: 1058 -----PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLR 1096


>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
 gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
          Length = 1233

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 187/814 (22%), Positives = 360/814 (44%), Gaps = 105/814 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGR 61
           ++ Y +T  +PT V  S  GNF+  +++ +++     +E+      G +  +L   ++G 
Sbjct: 1   MYLYNLTLQRPTAVYQSICGNFSGTKQIEIVLNHGRSLEMIRYDEDGKMSSVLYSEVFGV 60

Query: 62  IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
           I ++  FR    ++D++ + ++  +  +L++++  ++   +   +   R G R    GQ 
Sbjct: 61  IRSIIPFRLTSGSKDYIVVGSDSGRVVILEYNSTKNQF-DKVHQETFGRSGCRRIVPGQY 119

Query: 121 GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCA 173
             +DP  R  +IG      L  ++  D+  +L    +  LE  +   I F       G  
Sbjct: 120 LAVDPKGRAFMIGAIEKQKLVYILNRDSSAKL--TISSPLEAHKSSTIIFSMCGVDVGFE 177

Query: 174 KP---TIVVLY------------QDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADL 218
            P   TI V Y            +DN   + +  YE+ L   + V   WS + +D+ A++
Sbjct: 178 NPIFATISVDYSDDSGGNIEEDLEDNGKKKVLTFYELDLGLNNVVR-KWS-DQIDDTANI 235

Query: 219 LIPVPPP---LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------- 267
           ++ VP       GVL+  E+ IVY + +  +   IR  I + Y      G          
Sbjct: 236 VMTVPGSNEGPGGVLVTSEDYIVYRNQDHPE---IRAKIPRRYNSNPDKGLLIVSYSSHK 292

Query: 268 ------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
                 +L+    G L+ + +  + E VT + I       +A++++ L N  ++  S +G
Sbjct: 293 QKNMFFFLVQSEFGDLYKITLDFKGEMVTAVNISYFDTIPLANSLTVLKNGFLFAASEFG 352

Query: 322 DSQLIKLN--------------LQPDAKGSYVEVLER-----------YVNLGPIVDFCV 356
           D  L                  +  + K  ++   +R             +L PIVDF V
Sbjct: 353 DHSLYFFKSLGDDTEEGNNEGTITMEEKDGFIWFKQREELKNLVQTSTLSSLSPIVDFKV 412

Query: 357 VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL----RSSTDD 411
           +D+ R+   Q+ +  G  KD SL+++R+G+ ++   + +L G+  G+W++      S  D
Sbjct: 413 LDIVREENPQLYSLCGTSKDSSLKVLRHGLSVSTITNAKLPGVPSGIWTVPKSNSPSAQD 472

Query: 412 PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             D ++VVSF+  T +L++   + ++E    G    T TL       + ++QV     R 
Sbjct: 473 QTDKYIVVSFVGSTSVLSVG--ETIQENHESGILESTTTLLIGSMGEDSILQVFPTGFRF 530

Query: 472 VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEY 530
           + S  R   NEW++P   ++  AT N +Q+++A  GG ++Y E+   G LTE+       
Sbjct: 531 IRSDMRT--NEWRAPGRKTIVRATCNQNQLVIALSGGEVIYFELDQSGGLTEIIKKDFRR 588

Query: 531 EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL--GGEIIPRSVLLC 588
           +I+C++I+PI +  S ++  A+  W +  VR+ SL   N + +  +    ++   S+ + 
Sbjct: 589 DIACIEISPIPKGRSMARFLAISDW-EGPVRLLSLDRDNCLGQISMLDTDKVYIESLSIV 647

Query: 589 AFE-----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
             +                 G  +L   L +G +    L+  +GEL+D +   LG +P+ 
Sbjct: 648 EMQVNEAGVDNFKVSSQNMGGSLFLFVGLKNGVIKRATLDNYSGELSDIRTRLLGRRPVK 707

Query: 632 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
           L     +    + A S R  + Y++  KL    ++++ + +    +S   P+S+    E 
Sbjct: 708 LFKIKVRGGNGILALSSRVWLNYANQGKLEIVPLSVEPLENASNLSSDQSPESIVATSED 767

Query: 692 ELTIGTIDDIQKL-HIRSIPLGEHPRRICHQEQS 724
            + I TID +  L +  +I LG  PRR     Q+
Sbjct: 768 HIIIFTIDKLGDLFNQETIKLGATPRRFIVHPQT 801



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 42/364 (11%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DSNVYYCVG---TAYVLPEENEPTK 800
            ++++D  + +   +Y LD  E G S+ + SFSD  D  ++  VG      + P+  E   
Sbjct: 881  IKIIDPISHQVYESYQLDENEAGFSLCTLSFSDRGDGEIFLVVGCGNNVILNPKSCESAS 940

Query: 801  GRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 860
              +  F  E  KLQL+ + E +  VY++  F G+L A + + I++Y     D G ++L  
Sbjct: 941  INLYKFTEEGKKLQLVYKTEAEEPVYAMAPFQGRLCAGVGKNIRIY-----DMGKKKLLR 995

Query: 861  ECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
            +C        +  + + GD +VVGD+ +SI  + YK  E  +   A D    W+++  +L
Sbjct: 996  KCETKNLPNTIVNIHSLGDRLVVGDIQESIHFIKYKKLENMLYVFADDLAPRWITSSVML 1055

Query: 920  DDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGE 961
            D D   GA+   N+F +R                  K   G  +    +LE +     G+
Sbjct: 1056 DYDTVAGADKFGNIFILRLPSNVSDEVEEDPTGSKLKFESGLLNGAPHKLEHIANIFAGD 1115

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVI 1020
             +      SLV       VG    +++ T++G IG +I  +  E   F   L+  LR   
Sbjct: 1116 AITTLNKTSLV-------VGGSDVLLYTTISGAIGALIPFVSREDVDFFSSLELQLRNEH 1168

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              + G +H  +RS+         KN +DGDL E F+ L   +  +I++ ++ S  E+ K+
Sbjct: 1169 APLCGRDHLAYRSY-----YFPVKNIIDGDLCEQFITLDPQKQRQIAEELSRSPSEVLKK 1223

Query: 1081 VEEL 1084
            +E++
Sbjct: 1224 LEDI 1227


>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1244

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 264/1168 (22%), Positives = 474/1168 (40%), Gaps = 170/1168 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            Y +T   P+ V  + VGNF+  +   +I+++         T   L  +L   ++G + +L
Sbjct: 4    YNLTLQAPSAVPQAIVGNFSGARHQEIIVSRGPDP-----TSGKLTSVLTHDVFGAVRSL 58

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSE---LITRAMGDVSDRIGRPTDNGQIGI 122
              FR  G  +D+  + ++  +  +L +D +++E   L T   G       R    GQ   
Sbjct: 59   VAFRLTGGTKDYAIVGSDSGRIFILDYDPKANEFKRLYTETYGKSG---ARRIVAGQYFA 115

Query: 123  IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQ------------------ 162
            +DP  R  +I       L  ++  D    L  +  + +   Q                  
Sbjct: 116  VDPKGRAVMIAAMEKSKLVYILNRDAATNLTISSPLEVHRNQSILFHITGVDVGFENPLF 175

Query: 163  -VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
              L+I +      PT    +   K    +  YE+ L     V   WS+   D  A+ L+ 
Sbjct: 176  AALEIDYGKSDQDPTGEAFHNAEK---MLTFYELDLGLNHVVRK-WSEPT-DPRANFLVQ 230

Query: 222  VPPPLC-----------GVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLL 270
            VP               GVL+  E  I+Y   +  +    R  + +    +D++    ++
Sbjct: 231  VPGGTSASSPDKFDGPSGVLVCCENHIIYRHMDHPQH---RVPVPRRRAPLDSEERGLII 287

Query: 271  GDHAGLLHLLVIT--HEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
               A ++H + +T  H+ ++VT LKI+      ++S++  L +  +++ S +G   L + 
Sbjct: 288  V--AAVMHKMKVTIDHQDDEVTSLKIKYFDTVPVSSSLCILKSGFLFVASDFGPHHLYQF 345

Query: 329  NLQPD-------AKGSYVE------------------------VLERYVNLGPIVDFCVV 357
                D       +  SY +                        + +   ++ PI+D  V+
Sbjct: 346  QKLGDDDAETEFSSSSYPKNGMADPDEALPSAYFQPRPLENLLLCDSLDSINPIIDAKVL 405

Query: 358  DLER--QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI-KGMWSLRSSTDDPF 413
            +L        Q     G     S R++R+G+ + E  S +L  GI   +W+ +   DDPF
Sbjct: 406  NLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAVWTTKIRADDPF 465

Query: 414  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            DT++V+SF++ T  L + + + +EE +  GF S   TL       + L+QV    +R + 
Sbjct: 466  DTYIVLSFVNGT--LVLTIGETIEECQETGFLSAEPTLGVQQIGDDALLQVYPHGIRHIL 523

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ-LEYE 531
            +  R   NEWK P G ++  A  N+ QV++A     LVY E+  DG L E +  + +   
Sbjct: 524  ADKRV--NEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLNEYQDRKAMGSV 581

Query: 532  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS------V 585
            +  L +  + E    +   AVG   D +VRI SL   N +    L     P S      +
Sbjct: 582  VLALSMAEVPEGRQRTPYLAVGC-EDQTVRIISLDPDNTLETISLQALTAPPSAICIVAI 640

Query: 586  LLCAFEGIS---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
            +  A   IS   ++   L  G  L  +L+  TGELTD +   LGT+PI L   +      
Sbjct: 641  IDAAVNKISETLFVNIGLTSGLFLRTVLDPVTGELTDTRTRFLGTRPIRLNRVTIAGKPA 700

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI- 701
            + A S R  + Y+  + L  + +    + ++  F +   PD     K   + I  I  I 
Sbjct: 701  LLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGSTIKIFQITKIG 760

Query: 702  QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH----------------- 744
            Q+L    +PL   PR+I     +  F I    +++ ++E+ +H                 
Sbjct: 761  QRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEA-VHGALQQPDLKKYDRDVLE 819

Query: 745  ------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-DDSNVYYC 785
                               VR+++      I    LD  E    I    FS  D+ +   
Sbjct: 820  LLPEVFGHPRAPACVWASCVRIVNPVELTTIYRLDLDNNEAAFLIALVPFSARDNELTLV 879

Query: 786  VGT---AYVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLL-AAI 839
            VGT   A++ P     T G +  + +++DG+ L+L+ + E      SL AF G LL A I
Sbjct: 880  VGTAKDAFLAPRSC--TSGYLRTYRVLDDGRGLELLHKTECDDIPLSLLAFQGNLLVAGI 937

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEE 898
             + +++Y     D G ++L  +        A+  + T+G  I+ GD  +SI   +YK  E
Sbjct: 938  GKCLRIY-----DMGKKKLLRKAESKLFTTAITSLSTQGARIIAGDAQQSIFFCVYKATE 992

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEGATDEERG------ 949
              +   A D    W ++  +LD +  +  +   N+F  R +   S    D+  G      
Sbjct: 993  NRLLVFADDSQQRWTTSQVMLDYNTVVAGDKFGNVFVNRLSDHVSNLVDDDPTGTGLLHE 1052

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASLPHEQYL 1007
            +   +G  H    +  F  G ++M L  + +  G    +++  ++G IG++     ++ +
Sbjct: 1053 KGMFMGAPHKTSMLCHFHVGDIIMSLQRTSLVPGGREVIVYFGLHGTIGMLVPFASKEDV 1112

Query: 1008 -FLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
             F   L+ ++R     +   +   WR +
Sbjct: 1113 DFFTPLEQHMRSENLSLVSRDILAWRGY 1140


>gi|183233163|ref|XP_654084.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801703|gb|EAL48698.2| damaged DNA binding protein, putative [Entamoeba histolytica
            HM-1:IMSS]
 gi|449708240|gb|EMD47737.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
          Length = 995

 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 255/1113 (22%), Positives = 483/1113 (43%), Gaps = 158/1113 (14%)

Query: 9    TAHKPTNVTHSCVGNFTSPQELN---LIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
            T   P+ V+HS     T    LN   L+++K   +E++ +   GL P+        I  L
Sbjct: 4    TLINPSGVSHSITAQLT----LNINYLVVSKLNLLELYEINSTGLIPLTTKRYSSGITLL 59

Query: 66   ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
              ++P  +  D+L + T+  +  +L+    +  +I+   G + D  GR    G   +I P
Sbjct: 60   LKYKPLKDITDYLIVVTQSNEIEILKLTTSALHIISS--GSLKDTFGRKAFFGVKAVISP 117

Query: 126  DCRLIGLHLYDGLFKVI--PFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD 183
            + +++ L+LY+ L KV+  P   K QL  A NI++    +LD+ F        + +L+++
Sbjct: 118  NNQILLLNLYEQLIKVVLLPQYPKDQLT-ASNIKVNHSHILDMTFCLLNDSYQLALLHEN 176

Query: 184  NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSAN 243
             +D RH+ TY +     +  +G +SQ N+ +    ++     + G+ +I +E   Y + N
Sbjct: 177  KRDIRHIDTYTLN-SFNELEKGSFSQPNVGSTTSRILGFKDGIIGIFVISDEIGCYFNGN 235

Query: 244  A---FKAIPIRPSITKAYGRVDA----DGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL 296
                   +   P+    + + D     D  R L      L   + I +E  ++T  +   
Sbjct: 236  GKHILCNLNQYPNTACCFIKKDVLIMTDSKRNL----DTLEFKVNINNEILEITKKQSPK 291

Query: 297  LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCV 356
            L + SI+STISYL N +++IGS  GD+ ++ LN +         +LE++ N G ++D   
Sbjct: 292  LLQ-SISSTISYLSNKILFIGSLNGDNLIMNLNGK---------ILEKWSNFGSLMD--A 339

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTF 416
              +  +    VV   G      L I   G GI E  S E+  IK + S+          +
Sbjct: 340  RQISNREDYLVVGNGGGKGSIGLMI--KGSGIEELGSCEINDIKSVESIEYDRK----KY 393

Query: 417  LVVSFISETRILAMNLEDE---LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
            ++V F  E+ I  +  + +   +EE+ ++    + + + C   I  +L+ V    +  + 
Sbjct: 394  VIVGFEEESNIWEIYQQSKHIKIEESSLKKVIGKERVICC-GIIKERLIFVCKKGIYSID 452

Query: 474  STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEIS 533
               +  +N       +  +    N  Q +    G  L   +I + +  + K   LE  +S
Sbjct: 453  KHQK--KNTLMKFDSFITHAKFIN--QQIYFIYGTEL--FKITEELKIQ-KMKDLEQNVS 505

Query: 534  CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            C DIN         +I  +G+W D ++ IF   D+N + K+    + I RS+L+      
Sbjct: 506  CFDIN---------EIIVIGLW-DGNILIF---DINGVLKKTEVVDTIGRSILI--DHNK 550

Query: 594  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSL---GTQPITLRTFSSKNTTHVFAASDRP 650
             Y+ C   D  ++ FL N    + T + K+      +Q I L+   S            P
Sbjct: 551  IYVGC---DNEIIVFLYNQMEEDCTYKNKLKYHIETSQSIKLKKIYS-----------IP 596

Query: 651  TVIYSSNKKLLYSNVNL-----KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 705
             VI  +NK   +    L     +++  +C   S      +  A +  +  G + ++ ++ 
Sbjct: 597  CVI--ANKTFTFQQTGLVPLAVEDLIDICE--SPVGDYGVICATKRGIVFGLMKEMSRVT 652

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 765
             + I  GE+  +I            ++K+           + L+D        ++ + T 
Sbjct: 653  FKMIHSGENCCKIATDGSYGLLVGKTIKS-----------INLID-------GSFGVTTI 694

Query: 766  EYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE-DGKLQLIAEKETKG 823
            E   + L+ C  S + N+Y  VGTA +   E EP+ GRIL+   + +G + ++  ++  G
Sbjct: 695  ELKSNELALCVDSLEDNIY-AVGTAIIRENEIEPSSGRILLIRQDTEGLIYIVGTEDYDG 753

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 883
            AVY L      ++A IN+ + + +   +D  T++          ++ + +    D+I+ G
Sbjct: 754  AVYCLKKCQKGIVAFINRNVHVIEKKGKDLNTKQ-----NMLLPLIGVSLDICKDYIIAG 808

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI---YLGAE--NNFNLFTVRK 938
            DL +S+S+  Y+++   ++   +D    W S V  ++ +    +L A+   N  +F    
Sbjct: 809  DLARSLSVYRYRNDIEHLDVVGKDNQIVWSSCVGSIESEYGTSFLVADVSGNIKIFN-SD 867

Query: 939  NSEGATDEERGRLEVVGEYHLGEFVN----RFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
              E  TD+E+  + ++ + H+ + +N     F  G L+                G V+G 
Sbjct: 868  EEEPKTDDEK--INLISQVHVADSINFIQKSFYKGCLM----------------GGVHGG 909

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            I  I  +  E YLFL K+Q+ L K            WR   N ++     N +DGD IES
Sbjct: 910  IYNICEISKEHYLFLNKIQSKLVK----------SNWRESVNTQQASPMMNCIDGDKIES 959

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             L+ S  +   +++ + V  +E+ ++++ L  L
Sbjct: 960  ILEWSEKKQMLLAQKIGVEHQEMIEKIQSLFSL 992


>gi|58269920|ref|XP_572116.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|57228352|gb|AAW44809.1| conserved hypothetical protein [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1276

 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 205/844 (24%), Positives = 379/844 (44%), Gaps = 108/844 (12%)

Query: 297  LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL-------------------------- 330
            LG +S  S+I+YLD++ +++ S+  DS L++L                            
Sbjct: 413  LGASSPPSSITYLDSSHLFVSSAVADSVLLRLPKVESSSSVSSGKGKGRAVTSPIGDQAD 472

Query: 331  -----------QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSL 379
                       + D  G   E+LER++N+ P+ D CVV  E      +V  SGA +  SL
Sbjct: 473  KWEVLYEIGKDRNDTDGGP-EILERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSL 531

Query: 380  RIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            R+VR+G+G+ E  +++ L  ++ MW L  ST  P    L++S  + T  + + L+ E+  
Sbjct: 532  RVVRSGVGLEELVTIQGLHDVQKMWPLTDSTAIPR---LLLS--TSTSTILLQLQPEISA 586

Query: 439  TEIEGFCSQTQTLFCHDAIYNQLV-QVTSGSVRLVSSTS-RELRNEWKSPPGYSVNVATA 496
              I      ++TL        +L+ QVT   + L S  S  +L  + +      +  A  
Sbjct: 587  IPITDVIFNSETLAAGILPGAELLAQVTPRGLSLWSDLSVGQLEAQVEVDKETEIVCAQV 646

Query: 497  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
             A   ++A  GG LV   + +   +      ++ E+S + I+    + S   + +  M  
Sbjct: 647  TADWAVVAKKGGSLVVFHVSNTGFSPQGTIDVKEEVSAVAISSSSGSSSPIIVISTWM-- 704

Query: 557  DISVRIFSLPDL-NLITKEHLGGEIIPRSVLLCA---FEGISYLLCALGDGHLLNFLLNM 612
                 +++L  + N +    +  E    S+ L +   +     LL  L +G L  + LN 
Sbjct: 705  -AKTFVYTLSQISNGVDGLSIQSESSATSLQLRSHPFYPAGIQLLSGLDNGLLHIYDLNT 763

Query: 613  K-TGE-----LTDRKKVSLGTQPITLRTFSSKNTTHVFAA---SDRPTVIYSSNKKLLYS 663
              +GE     +   K  SLG +P+ L    S +      +   ++R +VI+ S  ++ +S
Sbjct: 764  SDSGEAEGLMVKSSKTTSLGLRPLVLHPCESTHGDEKVISVGLTERMSVIFESKDRIEFS 823

Query: 664  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQE 722
            +VN+K V      ++++ P     ++   L++  ++ ++KLH+++   G E   ++ + +
Sbjct: 824  SVNIKNVMAATSVDTSSGPVFALFSRTSGLSLVKVNSLKKLHVQTCDTGNESISKLTYMD 883

Query: 723  QSRTFAICSLKNQSC--AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 780
            + +  A  S +       +  E +FV++ D  + E +S++ L   E   S+ S   +   
Sbjct: 884  EYKAIACGSTRRTQLRDGDVEEENFVQIRDGTSLEPLSSFSLRGRELVTSLRSVFLT--G 941

Query: 781  NVYYCVGTAYVLPEENEPT-----------KGRILVFIVEDGK------LQLIAEKETKG 823
             +Y  VGTA++  ++ E +           +GR+L+   ++G       +++ AE  T G
Sbjct: 942  RIYLAVGTAFLPADDGEDSSWDEGNLAVVREGRVLLLEFKEGDAGGGWDIKIKAELATVG 1001

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ-SECGHHGHILAL-------YVQT 875
            AVY+L   +G L  A   K+ +++    D    EL+ +      ++++        +++ 
Sbjct: 1002 AVYALEEIHGFLAVAAGSKLTIHRL---DHNPVELEETSSWASAYVISSLSVLPPSHIRP 1058

Query: 876  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD--DIYLGAENNFNL 933
             G  IV GD M+S+ +L     +G I +  R+   + ++A+ +L D  D  + ++   NL
Sbjct: 1059 EGALIV-GDGMRSVIVLNVDEGDGMIYDDERNMATHGVTALGLLKDKGDGVVISDAYSNL 1117

Query: 934  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
             T R N          +LE    + L E V RF+ GSLV      ++  IP V+F T  G
Sbjct: 1118 LTYRLNQ---------KLERAATFGLHEEVTRFQSGSLVPTTTAPEI-IIPDVLFATREG 1167

Query: 994  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
             +G+I  L       L+ LQ N+ K+ KG G +    WR   +     D   F+DGD ++
Sbjct: 1168 RLGIIGELGTRSSRTLDDLQRNMSKIWKGPGEVGWSNWRRAGSNLVGKDTAGFVDGDFVQ 1227

Query: 1054 SFLD 1057
             FLD
Sbjct: 1228 KFLD 1231


>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
          Length = 1221

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 262/1232 (21%), Positives = 502/1232 (40%), Gaps = 177/1232 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T     +V  + VG F+  ++  +++AK +R+E  LL P      ++ +L    +G 
Sbjct: 7    YNLTLQPSGSVNATVVGQFSGTRQQEIVVAKGSRLE--LLRPDTSTGKVETVLSQDAFGV 64

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            + +L  FR  G ++D+L + ++  +  +L++  +++    +   +   R G R    GQ 
Sbjct: 65   VRSLAAFRLTGGSKDYLIVGSDSGRIVILEFQPQTNSF-DKVHQETFGRSGSRRIVPGQY 123

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKF--- 168
               DP  R  +IG      L  ++  D +  L      EA   N  +  +  +D+ F   
Sbjct: 124  LATDPKGRATMIGAMEKAKLVYILNRDAQANLTISSPLEAHRPNGIIHHIVGVDVGFENP 183

Query: 169  LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVE---------GPWSQNNLDNGADLL 219
            L+ C    + + Y ++      + Y+ A K   + E           WS+  +D  ++LL
Sbjct: 184  LFAC----LEIDYSESDHDPSGRAYDEAEKTLTYYELDLGLNHVVRKWSEP-VDPRSNLL 238

Query: 220  IPVPPPL----------CGVLIIGEETIVYCSANAFK-AIPIRPSITKAYGRVDADGSR- 267
            + VP              GVL+  E+ I Y   +  +  +PI   +       +  G+  
Sbjct: 239  LQVPGGYNHNLEKWDGPSGVLVCSEDYITYKHQDQPEHRVPIPRRLNPIEKMSERRGTLV 298

Query: 268  -------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
                         +L+    G L  + + H+ +++  LKI+      +AS ++ L +  +
Sbjct: 299  VASVLHKMKNAFFFLVQTEDGDLFKITMEHQDDEIRSLKIKYFDTVPVASGLAILRSGFL 358

Query: 315  YIGSSYGDSQLIKLN------------------------------LQPDAKGSYVEVLER 344
            ++ S +G   L                                    P +  + V+V E 
Sbjct: 359  FVASEFGPQLLYSFQKLGDDDDLPEYISTDYDENGAGRKRPQLPTFTPRSLDNLVQVDE- 417

Query: 345  YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMW 403
              +L PI+D   ++       Q+    G     S +++R+G+   E  S +L G+   +W
Sbjct: 418  MPSLDPILDAKPLNPLASDSPQIFVACGRGARSSFKMLRHGLEAQEAVSSDLPGVPSAVW 477

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 463
            + + +  D +D+++++SF++ T +L++   + +EE    GF + + TL       + L+Q
Sbjct: 478  TTKITRQDEYDSYIILSFLNGTLVLSIG--ETIEEVGDSGFLTSSPTLAVQQLGEDALLQ 535

Query: 464  VTSGSVRLVSSTSRELRNEWKSPP---GYSVNVAT--ANASQVLLATGGGHLVYLEIG-D 517
            V    +R +    +   NEW +P    G    +     N  QV +A     LVY E+  D
Sbjct: 536  VHPYGIRHILVDKQV--NEWATPSLPNGVQTTIVAICTNERQVAVALSSNELVYFELDMD 593

Query: 518  GILTEVKHAQLE-YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
            G L E +  +     +  + +    E    +   A G   D +VRI SL   + +    +
Sbjct: 594  GQLNEYQDRKATGATVLTMSMADCPEGRQRTPYLAAGC-DDSTVRIISLEPASTLASISI 652

Query: 577  GGEIIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT 627
                 P S +  A          +  +++   L +G LL  +L+  TG+LTD +   LG+
Sbjct: 653  QALTAPASSICVAEMKDATVDRNQATTFVNIGLSNGVLLRTVLDAMTGQLTDTRTRFLGS 712

Query: 628  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 687
            + + L        + V A S R  + ++   +L ++ +    + H   F++   P+ L  
Sbjct: 713  KAVRLIRTKVHGQSAVMALSTRTWLSFTYQSRLQFTPLIFDALDHAWSFSAELCPEGLIG 772

Query: 688  AKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICH-----------QEQSRTFAICSLKNQ 735
                 L I TI  +  KL   S+ L   PR+I H           +   RT +  + + +
Sbjct: 773  IVGSTLRIFTIPSLASKLKQDSVALSYTPRKIAHHPDEQGLFYVVEADRRTLSPGAQRRR 832

Query: 736  SCAEESEMH--------------------------FVRLLDDQTFEFISTYPLDTFEYGC 769
              A E E+                            VR++D    +      LD  E   
Sbjct: 833  VEALEKELKPHQRGVLDLKPAEFGLIRGEAGNWASCVRVVDGPQSQTTHKIELDDNEAAF 892

Query: 770  SILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAV 825
            S+    F S +   +  VG+A  V+       K  +  + + +G  +L++  + E     
Sbjct: 893  SVAIVPFASAEKQSFLVVGSAVDVVLSPRSFKKAYLTTYRLINGGRELEVHHKTEIDDIP 952

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGD 884
              L  F G+LLA + + +++Y     D G ++L  +C +     A+  +  +G  IVVGD
Sbjct: 953  LVLRPFQGRLLAGVGKALRIY-----DLGKKKLLRKCENKSFPTAIVSLDAQGSRIVVGD 1007

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEG 942
            + +SI    YK  E  +   A D    +++   +LD D    A+   NL+ +R   ++  
Sbjct: 1008 MQESIVFTSYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNLYVLRIDADTSR 1067

Query: 943  ATDEERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNG 993
            + DE+   + +V       G  H    +  +  G ++  L  + +  G    +++  ++G
Sbjct: 1068 SVDEDPTGMTIVHEKPVLMGAAHKATLLAHYFVGDIITSLNRTVMVPGGREVLMYTGISG 1127

Query: 994  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             IG +   +  E    L  LQT LR+    + G +H  +RS     K+V     +DGDL 
Sbjct: 1128 TIGALVPFVSKEDVDTLSTLQTQLRQENNSLVGRDHLAYRSSYAPVKSV-----IDGDLC 1182

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E+F  L   + + I++ ++    E+ K++ +L
Sbjct: 1183 ETFGLLQPAKQNAIAQELDRKPSEINKKLAQL 1214


>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
          Length = 1221

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 268/1235 (21%), Positives = 505/1235 (40%), Gaps = 183/1235 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
            Y +T     +V  + VG F+  ++  +++AK +R+E  LL P      ++ +L    +G 
Sbjct: 7    YNLTLQPSGSVNATVVGQFSGTRQQEIVVAKGSRLE--LLRPDTQTGKVETVLSHDAFGV 64

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            + +L  FR  G ++D+L + ++  +  +L++ + ++    +   +   R G R    GQ 
Sbjct: 65   VRSLAAFRLTGGSKDYLIVGSDSGRIVILEYQSRTNSF-DKVHQETFGRSGSRRIVPGQY 123

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAF--NIRLEELQVLDIKF--- 168
               DP  R  +IG      L  ++  D +  L      EA   N  +  +  +D+ F   
Sbjct: 124  LATDPKGRAAMIGAMEKAKLVYILNRDAQANLTISSPLEAHRPNGIIHHIIGVDVGFENP 183

Query: 169  LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVE---------GPWSQNNLDNGADLL 219
            L+ C    + V Y ++      + +E A K   + E           WS+  +D+ ++LL
Sbjct: 184  LFAC----LEVDYSESDHDPSGRAFEEAEKALTYYELDLGLNHVVRKWSEP-VDSRSNLL 238

Query: 220  IPVPPPL----------CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-- 267
            I VP              GVL+  E+ I Y   +  +    R  I K    V+    R  
Sbjct: 239  IQVPGGYNQNLEKWDGPSGVLVCSEDYITYKHQDQPEH---RVPIPKRLNPVEKSSERRG 295

Query: 268  ----------------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDN 311
                            +L+    G L  + + H+ +++  LKI+      +AS ++ L +
Sbjct: 296  TLIVASVLHKMKNAFFFLVQSEDGDLFKVTMEHQDDEIRSLKIKYFDTVPVASGLAILRS 355

Query: 312  AVVYIGSSYGDSQLIKLN------------------------------LQPDAKGSYVEV 341
              +++ S +G   L                                    P    + V+V
Sbjct: 356  GFLFVASEFGPQLLYSFQKLGDDDDLPEYSSTDYDENGAGRRRPQLPTFTPRPLDNLVQV 415

Query: 342  LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-K 400
             E   +L PI+D   ++       Q+    G     S +++R+G+   E  S +L G+  
Sbjct: 416  DE-MPSLDPILDAKPLNPLASDSPQIFAACGRGARSSFKMLRHGLEAQEAVSSDLPGVPS 474

Query: 401  GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 460
             +W+ + +  D  D+++++SF++ T +L++   + +EE    GF + + TL       + 
Sbjct: 475  AVWTTKITRQDEHDSYIILSFVNGTLVLSIG--ETIEEVSDSGFLTSSSTLAVQQLGEDA 532

Query: 461  LVQVTSGSVRLVSSTSRELRNEWKSPP----GYSVNVAT-ANASQVLLATGGGHLVYLEI 515
            L+QV    +R +    +++ NEW +P       +  VAT  N  QV++A     LVY E+
Sbjct: 533  LLQVHPHGIRHIL-VDKQI-NEWATPSLPNGRQTTIVATCTNERQVVVAFSSNELVYFEL 590

Query: 516  G-DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK 573
              DG L E +  + +   +  + +    E    +   AVG   D +VRI SL   + +  
Sbjct: 591  DMDGQLNEYQERKAMGAAVLTMSMADCPEGRQRTPYLAVGC-DDSTVRIISLEPNSTLAS 649

Query: 574  EHLGGEIIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
              +     P S +  A             +++   L +G LL  +L+  TG+LTD +   
Sbjct: 650  ISIQALTAPASSICMAEMHDATIDRNHATTFVNIGLQNGVLLRTVLDAVTGQLTDTRTRF 709

Query: 625  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
            LG++ + L        + V A S R  + ++   +L +  +    + H   F++   P+ 
Sbjct: 710  LGSKAVRLIRTKVHGQSAVMALSTRTWLSFTYQDRLQFVPLIFDALDHAWSFSAELCPEG 769

Query: 685  LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICH-----------QEQSRTFAICSL 732
            L       L I T+  +  KL   S+ L   PR+  H           + + RT +  + 
Sbjct: 770  LIGIVGSTLRIFTMPSLASKLKQDSVALSYTPRKFAHHPNEQGLFYVVEAEHRTLSPGAQ 829

Query: 733  KNQSCAEESEMH--------------------------FVRLLDDQTFEFISTYPLDTFE 766
            + ++   E E+                            VR++D    +      LD  E
Sbjct: 830  RRRTEMLEKELKPHQRGVLDLNPAEFGLIRAEAGNWASCVRVVDGVQSQTTHKLELDDNE 889

Query: 767  YGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETK 822
               S+    F S +      VG+A  V+       K  +  + +  +G+ L+++ + E  
Sbjct: 890  AAFSVAVVPFASAEKEAMLVVGSAVDVVLSPRSFKKAYLTTYRLTNNGRELEVLHKTEVD 949

Query: 823  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIV 881
                 L  F G+LLA I + +++Y     D G ++L  +C +     A+  +  +G  IV
Sbjct: 950  DIPLVLRPFQGRLLAGIGKALRIY-----DLGKKKLLRKCENKSFATAIVSLDAQGSRIV 1004

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KN 939
            VGD+ +SI    YK  E  +   A D    +++   +LD D    A+   N++ +R   +
Sbjct: 1005 VGDMQESIIFTSYKPLENRLVTFADDVMPKFVTRCAMLDYDTVAAADKFGNVYVLRIDAD 1064

Query: 940  SEGATDEERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGT 990
            +  + DE+   + +V       G  H    V  F  G +V  L  + +  G    +++  
Sbjct: 1065 TSRSVDEDPTGMTIVHEKPVLMGAAHKATLVAHFFVGDIVTSLNRTVMVPGGREVLLYTG 1124

Query: 991  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            V+G IG +   +  E    L  L+++LR+    + G +H  +RS     K+V     +DG
Sbjct: 1125 VSGTIGALVPFVSKEDVDTLSTLESHLRQENSSLVGRDHLAYRSSYAPVKSV-----IDG 1179

Query: 1050 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DL E+F  L   + + I+  ++    E+ K++ +L
Sbjct: 1180 DLCETFGLLPPAKQNAIATELDRKPSEINKKLAQL 1214


>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
          Length = 1212

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 282/1263 (22%), Positives = 499/1263 (39%), Gaps = 245/1263 (19%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T   PT +T + VGNF+  ++  +II++ T +E  LL P      +  +L   ++G 
Sbjct: 4    YNLTLQAPTAITQAIVGNFSGIRQQEIIISRGTILE--LLRPDSSTGKVSTVLAQDVFGT 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
            I ++  FR  G  +D+  + ++  +  VL++D +++               R    G++ 
Sbjct: 62   IRSIAAFRLTGGTKDYCIVGSDSGRIIVLEYDPKTNSFTKLQQETFGKSGSRRIVPGEML 121

Query: 122  IIDPDCRLIGLHLYDG--LFKVIPFDNKGQLK-----EA------------FNIRLEE-- 160
             +DP  R + +   +   L  V+  D    L      EA             ++  E   
Sbjct: 122  AVDPKGRSVMISAVEKSKLVYVLNRDAAANLTISSPLEAHRNGAIIHAIVGVDVGFENPL 181

Query: 161  LQVLDIKFLYGCAKPTIVVLYQDNKDARHVKT-YEVALKDKDFVEGPWSQNNLDNGADLL 219
               L++ +    A PT     Q  ++A  + T YE+ L     V    S    D  A+LL
Sbjct: 182  FAALEVDYTESDADPT----GQAFRNAEKMLTFYELDLGLNHVVRK--SSEPTDRRANLL 235

Query: 220  IPVP------------PPLCGVLIIGEETIVYCSANA-FKAIPIRPSITKAYGRVDADGS 266
            + VP            P   GVL+  E+ I+Y   +    A+  R  I +       D  
Sbjct: 236  VQVPGGQSATTNAFDGP--SGVLVCCEDHIIYRPVDLDGGAVSHRVPIPRRRTPWGGDEE 293

Query: 267  RYLLGDHAGL-------LHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
            R L+   A +       L+ + + HE E V  + I+       A+++  L +  +++ + 
Sbjct: 294  RGLIITSAVMHKMKVCDLYKVTLEHEDEIVKSMTIKYFDTVPTATSLCILKSGFLFVAAE 353

Query: 320  YGDSQLIKLN-------------------------LQP--------------DAKGSYVE 340
             G+  L +                           L P              D   S+  
Sbjct: 354  GGNHHLYQFQKLGDDDAEPEFTSNSYSNNGISSSPLPPCYFRPHPLDNLVLADEMTSFCP 413

Query: 341  VLE-RYVNL-GP-----------------IVDFCVVDLERQGQG-QVVTCSGAYKDGSLR 380
            +L+ R +NL GP                 IV + +V    Q    Q     G     S R
Sbjct: 414  ILDARILNLFGPTSGGMSAFTQRSDEPSLIVSYRIVPATLQSDTPQFYLACGRGARSSFR 473

Query: 381  IVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET 439
            ++R+G+ + E  S EL G+  G+W+++ +  D +D ++++SF++ T +L++   + +EE 
Sbjct: 474  MLRHGLEVEESVSSELPGVPNGVWTVKVNDGDQYDKYIILSFVNGTLVLSIG--ETIEEV 531

Query: 440  EIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRN-----EWKSPPGYSVNV 493
               GF S   TL       N  L+QV  G VR V  +  +L +     EW++P G  V  
Sbjct: 532  ADTGFLSSAPTLAVQQLADNGGLIQVHPGGVRHVRPSQGDLASTAGVTEWRAPQGRQVAS 591

Query: 494  ATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ-LEYEISCLDIN--PIGENPSYSQI 549
            AT N  QV +A   G LVY E+  +G+L E    + +   + C+ I   P G  P+ S  
Sbjct: 592  ATTNTRQVCVALNSGELVYFELDLNGVLQEYGEMRAVGSAVVCMSIAEVPEGRQPNGSN- 650

Query: 550  AAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV--LLCAFEGISYLLCALGDGHLLN 607
                         F  P ++L      G   + R V  L+      + ++ A G  ++  
Sbjct: 651  ------------HFLGPRVDLGNHLVTG---LSRHVWMLVVGLTNETSVVGAHGTSNVYF 695

Query: 608  FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 667
            F                LGT+P+ L   S +  T + A S R  + Y+    L +S +  
Sbjct: 696  F----------------LGTRPVRLTRVSVQRNTCILALSSRSWLNYTHQNLLRFSPLIY 739

Query: 668  KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRT 726
            + + H   F++   P+ L       L I  I  +  KL   ++PL   PR+I    + + 
Sbjct: 740  ENLDHAWSFSAELCPEGLIGIAGSVLRIFQIPKLSDKLKQVTMPLSYTPRKIAVHPEHQL 799

Query: 727  FAICSLKNQSCAEESE----MHFVR--------LLD-----------------------D 751
            F +    +++   E++       VR        L+D                       D
Sbjct: 800  FYVIESDHRTWGSEAKNKRLAELVRAGRQIDQELVDLPAEDFGLPRAGAGQWASCIRIID 859

Query: 752  QTFEFIST----YPLDTFEYGCSILSCSFSDDSN-VYYCVGTAY---VLPEE--NEPTKG 801
             T  F S       LD  E   S+    F+   N ++  VGTA    VLP +     T G
Sbjct: 860  PTEVFCSATLFKIELDNNESAFSVAVVPFAARENELFLVVGTAKDTNVLPRQCVGAVTSG 919

Query: 802  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
             ++        L    + E      +L    G+L A + + +++Y+      G ++L  +
Sbjct: 920  SLVKLGWSTHILTRPIQTEVDDVPLALLGIKGRLCAGVGKALRIYEM-----GKKKLLRK 974

Query: 862  CGHHGHILALYVQT-RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
              + G   A+   T +G  I+VG++ +S+    YK E   +   A D +A W+++  ++D
Sbjct: 975  SENKGFATAIVTLTSQGSRIIVGEMQESVHYATYKPESNRLLVFADDTSARWVTSAALVD 1034

Query: 921  DDIYLGAENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYHLGEF 962
             D     +   N+F  R     S+   D+  G               + +++  Y++G+ 
Sbjct: 1035 YDTVAVGDKFGNIFVNRLPANISQQVDDDPTGAGIMHEREFLHGAPHKTKLLAHYNVGDI 1094

Query: 963  VNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIK 1021
            V      +LV        G    V +  ++G IGV+  L  ++ + F+  L+ ++R    
Sbjct: 1095 VTSVHRAALVP-------GGRDVVAYTGLHGTIGVLIPLASKEDVDFITTLEQHMRSEHS 1147

Query: 1022 GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
             + G +H  +R +      V  K  +DGDL E F  L  T+   I+  ++ +V E+ K++
Sbjct: 1148 SLVGRDHLAYRGY-----YVPVKAVVDGDLCERFAMLPSTKQKSIAGELDRTVGEVLKKL 1202

Query: 1082 EEL 1084
            E L
Sbjct: 1203 EGL 1205


>gi|47212603|emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1171

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 247/1127 (21%), Positives = 447/1127 (39%), Gaps = 213/1127 (18%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
            Y +T  + T +TH+  GNF+  +   +++++   +E  LL P      +  +L + ++G 
Sbjct: 4    YNITLQRSTGITHAIHGNFSGTKMQEIVVSRGKILE--LLRPDANTGKVHTLLTMEVFGI 61

Query: 62   IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
            I +L  FR  G  +D++ I ++  +  +L++ + S  +  +   +   + G R    GQ 
Sbjct: 62   IRSLMAFRLTGGTKDYIVIGSDSGRIVILEY-SPSKNMFEKIHQETFGKSGCRRIVPGQF 120

Query: 121  GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
              +DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G   P
Sbjct: 121  LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP- 223
                L  D ++A +  T E A   +    F E     N+        L+   + LI VP 
Sbjct: 181  MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG 240

Query: 224  ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
                P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 241  GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 295

Query: 268  -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                 +L     G +  + +  ++E VT ++++      +A+ +  L    +++ S +G+
Sbjct: 296  KSMFFFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGN 355

Query: 323  SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVD 358
              L ++                          QP    + V V E+  +L PI+   + D
Sbjct: 356  HYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQE-SLSPIMSCQIAD 414

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
            L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W++R   +D FD ++
Sbjct: 415  LANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYI 474

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
            +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475  IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR 532

Query: 478  ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
               NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+
Sbjct: 533  --VNEWKTPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCM 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEG 592
             +  +      S+  AVG+  D +VRI SL     L  ++ + L  +  P S+ +    G
Sbjct: 591  SLANVPPGEQRSRFLAVGL-ADNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGG 647

Query: 593  IS--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
            +               YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +
Sbjct: 648  VEKQDELGEKASIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                V A S R  + YS   +   + ++ + + +   F S   P+ +       L I  +
Sbjct: 708  GQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILAL 767

Query: 699  DDIQKLHIR-SIPLGEHPRR-ICHQE-----------QSRTFAICSLKNQSCAEE----- 740
            + +  +  + + PL   PR+ + H E            + T A  + + Q  AEE     
Sbjct: 768  EKLGAVFNQVAFPLQYTPRKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAA 827

Query: 741  --------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFEY 767
                    +EM                           VRL++      +    L+  E 
Sbjct: 828  GEDERELAAEMAAAFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEA 887

Query: 768  GCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKG 823
              S+  C F +  + +Y  VG A  ++      T G I  + +  G  KL+ + +   + 
Sbjct: 888  AFSVAVCRFPNTGDDWYVLVGVARDMILNPKSVTGGFIYTYRLVAGGEKLEFVHKTPVED 947

Query: 824  AVYSLNAFNGKLLAAINQKIQLY----KWMLR-------------DDGTRELQSECGHHG 866
               ++  F G++L  + + +++Y    K +LR             D+GT  L + C H G
Sbjct: 948  VPLAIAPFQGRVLVGVGKLLRIYDMGKKKLLRKCENKPARRRRFQDEGTTSL-AHCNHVG 1006

Query: 867  -----------------------------------HI--LALYVQTRGDFIVVGDLMKSI 889
                                               HI  L   + T G  ++V D+ +S+
Sbjct: 1007 PLDGPSSDPGPQLGQLTASGGPMTTSSQPIRQSRQHIPNLVTGIHTTGQRVIVTDVQESL 1066

Query: 890  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
              + Y+  E  +   A D    W++   +LD D    A+   N+  V
Sbjct: 1067 FWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMASADKFGNISIV 1113


>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
          Length = 1218

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 268/1249 (21%), Positives = 496/1249 (39%), Gaps = 202/1249 (16%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL--TPQGLQPMLDVPI 58
            M++  Y +T  + + +T +  GNF+  ++  + + + + +E+  L      ++ +  + I
Sbjct: 1    MAMHLYSLTLQRASAITCAVHGNFSGTKQQEIAVGRGSVLELLALDQASAKVKTIASINI 60

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +G +  L  FR  G ++D+L + ++  +  +L+++    E     +        R    G
Sbjct: 61   FGVVRCLTAFRLTGASKDYLVVGSDSGRVAILEYNPTKYEFERVHLETYGKSGSRRIVPG 120

Query: 119  QIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCA 173
            Q    D   R I +   +   L  V+  D+  +L     +   +   +    +    G  
Sbjct: 121  QYLAADAKGRAIMISAVEKQKLVYVMNRDSTARLTITSPLDAHKAHAVVFATVGLDVGFE 180

Query: 174  KPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
             PT   +  D ++A             +H+  YE+ L     V    S   L   A++LI
Sbjct: 181  APTFACVELDYEEADNDPSGEAVEATQQHLVFYELDLGLNHVVRK--SSEPLPGWANMLI 238

Query: 221  PVPPP---LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHA--G 275
             VP       GV++  E  +VY S       P  P+I     R    G R+ + D +  G
Sbjct: 239  QVPGADDGPGGVVVCCEGFLVYKS-------PEDPAIDV---RCPFPGRRHDISDPSKRG 288

Query: 276  LLHLLVITHEKEK---------------------------VTGLKIELLGETSIASTISY 308
                +V+ H   K                           V  ++++L     +A+++  
Sbjct: 289  AGRGIVVAHASHKTKTKFFFVVQLDNGDMFKVTLDVADDNVVSIRMKLFDTLPVATSLHI 348

Query: 309  LDNAVVYIGSSYGD------SQLIKLNLQPD-----------------AKG-----SYVE 340
            L +  +++ +  GD      +QL + + +P+                 A G     ++V 
Sbjct: 349  LRSGHLFVAAELGDHHLYQITQLAENDDEPEFTTRGLVMNGRVVPSSVAHGGVELSAFVY 408

Query: 341  VLERYVNL---------GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQ 391
                 +NL          P +   V DL  +   Q     G   + +LRI+R+G+ +++ 
Sbjct: 409  TPRPLLNLVLLDVMESTAPTMQCRVEDLLGEDAPQFYLLCGRGPNSTLRILRHGLEVSQL 468

Query: 392  ASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 450
            A+ EL      +WS++ S  D  DT+ +VS+ S T +L++   D++      G      T
Sbjct: 469  AATELTASPVAIWSVKRSIHDIHDTYFIVSWASATVVLSVG--DQVAPVSDSGLLLTVGT 526

Query: 451  LFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 510
            +       + L+QV +  +R + + SR   NEW++P    +  A  N  QV++A  GG L
Sbjct: 527  IAVSRIGEDDLLQVYTDGIRHIRADSRV--NEWRTPGRRQIVRAAINDRQVVIALAGGEL 584

Query: 511  VYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDL 568
            VY E+   G L E  +      E+  L I P+  +   ++  AV    D +VRI SL   
Sbjct: 585  VYFELDITGQLNEFAERFTSSAEVCALAIAPVPADRRRARFLAVAA-EDNTVRIVSLELS 643

Query: 569  NLITKEHLGGEIIP-RSVLLCAFEGISY--------LLCALGDGHLLNFLLNMKTGELTD 619
            +  T + LG + +  R+  LC F   S         L   L +G LL   +   +G LTD
Sbjct: 644  D--TLQSLGVQTVADRASSLC-FADPSLDNSSADLVLGVGLQNGILLRTSVEPSSGNLTD 700

Query: 620  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 679
             +   LGT+P+ L            A S RP + Y        + ++   +     F++A
Sbjct: 701  TRTRYLGTRPVMLFPSKVHGAAGFLALSSRPWIFYVQQGTPTLTPLSYDALDCAATFSAA 760

Query: 680  AFPDSLAIAKEGELTIGTIDDIQKL-HIRSIPLGEHPRRIC----HQ------------- 721
              P+ L       L +  +  +  + +  S+PL   PRR      H+             
Sbjct: 761  NCPNGLVAIAGNTLRVLNLPRLGSVFNQTSMPLKYTPRRFIVDSEHRLLVIAESDHNTFA 820

Query: 722  ------EQSRTFAICSLKNQSCAEE-SEMHF-------------VRLLDDQTFEFISTYP 761
                  EQ+R  A  +    + AE   +  F             +R++D Q  E +    
Sbjct: 821  AGRKAVEQARVAAETNTTQAAIAESLPDAVFGAPAAGAARWGSCLRIVDAQLRETLELIE 880

Query: 762  LDTFEYGCSILSCSF-SDDSNVYYCVGTAYVLPEENEPTKGRILV---FIVEDGKLQLIA 817
            LD  E   S+ SCSF   +   ++ VGT   L  +    +G  L    F  +  +L  + 
Sbjct: 881  LDEDEGVFSMTSCSFHGHEGQTFFIVGTTKALNLQTRAHQGGCLYTYRFNPQTRRLDFVH 940

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTR 876
              E +    ++  F G+LL  +   +++Y     D G R+L  +C +         + T 
Sbjct: 941  RTEVEDVPGAMYPFQGRLLVGVGSLLRVY-----DLGKRKLLRKCENRSIPNFVSSITTS 995

Query: 877  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
            G  IVV D+ +S   L Y+  +  +   A D N  W+++  ++D D     +   N+F +
Sbjct: 996  GGRIVVTDVQESFHFLRYRPSDNMLAVFADDSNPRWVTSSTMVDYDTVAAGDKFGNVFVL 1055

Query: 937  R-------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
            R                    +S+   +    + + +  +H+G+ V   +  +L+   P 
Sbjct: 1056 RLPQDLQDDLEDDPTGGRLLGSSKNTLNGAAQKADTIINFHVGDTVTTMQKTALI---PS 1112

Query: 978  SDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNN 1036
                    +++ T  G IGV+     +  + F + L+ ++R+    + G +H  +RS   
Sbjct: 1113 GS----ECLVYTTTLGAIGVLIPFTTQSDIDFFKHLEMHMRQENPPICGRDHLAFRS--- 1165

Query: 1037 EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NVSVEELCKRVEEL 1084
                  +KN +DGDL E F  L   +   I+  + + +  E+ K++E+L
Sbjct: 1166 --HYFPSKNVIDGDLCEQFNSLDPHKKRLIAGDLADRTPSEVSKKLEDL 1212


>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
          Length = 1232

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 264/1268 (20%), Positives = 489/1268 (38%), Gaps = 234/1268 (18%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
            Y +T  KPT V  + VGNF++ ++  + +A+   +E+     QG L  +    +YG I  
Sbjct: 5    YHLTLKKPTAVVTAVVGNFSNSKKQEIALARGHTLELLQADDQGKLNCVYSTEVYGIIRC 64

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN------- 117
            +  FR  G ++D+L + ++  +  +L+++   +    R   +   + G    N       
Sbjct: 65   IAPFRLTGASRDYLVVTSDSGRIVILEFNTAKNNF-DRVHCETYGKSGNNGYNLGNRRIV 123

Query: 118  -GQIGIIDPDCRLIGLHLYD--GLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIK 167
             G    +DP  R + L   +      ++  DNK  L  +  +   +       L  +D+ 
Sbjct: 124  PGHFLGVDPKGRALMLAALERQKFVYILNRDNKSNLTISSPLEAHKSHSICHYLTGIDVG 183

Query: 168  FLYGCAKPTIVVLYQD----NKDARHVKTYEVALKDKDFVEGPWSQNNL--------DNG 215
            F      P  V + Q+    N D       + + K   F E     N++        D  
Sbjct: 184  F----DNPIFVTIEQNYATVNGDLSSSSVGDESKKYLSFWEMDLGLNHVTKKISMQTDAT 239

Query: 216  ADLLIPVPPPLCG-------VLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRY 268
            A +L+P+    CG       VL+  E  ++Y         P  P +  AY R        
Sbjct: 240  AHMLVPI----CGGTDGPGGVLVCCENYLIYTK-------PDHPELCCAYPRRLECSQDT 288

Query: 269  LLGDHAGLLHLLV----ITHEKEKVTGLKIELLGE--------------TSIASTISYLD 310
             +  +A ++H +V    I  + E    LK+E++                  IA+++  L 
Sbjct: 289  GILINAWVVHKMVDFFFILLQTEYGDLLKVEIVSNDQTVKEIVCRYFDTVPIANSLCVLK 348

Query: 311  NAVVYIGSSYGDS---QLIKL---------NLQPDAKGSYVE----------VLERYVNL 348
               +++GS +G+    Q I L         +L P+   + V           +++   +L
Sbjct: 349  TGYLFVGSEFGNHCFYQFISLGNDETTACTSLHPEGGNAIVAFNPRSPKNLLLVDELTSL 408

Query: 349  GPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRS 407
             P+VD  + D       ++    G     + +I+R GI + E A+ EL G  + ++SL+ 
Sbjct: 409  SPVVDMKIADARGLDTSEIYLACGRGSRSTFQILRPGISVEELANNELPGYPRYVFSLKD 468

Query: 408  STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN-QLVQVTS 466
               D    +++V F  E   L +++ D +EE     F ++T TL C   +Y+   +Q+  
Sbjct: 469  KNADDCVGYIIVVF--EGNTLVLSVGDAVEEVSNSFFNTETTTL-CAMLMYDDSFIQIHE 525

Query: 467  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKH 525
            G +R +        +EWK P    +   +AN  Q+L+A  GG ++Y EI +   L E+  
Sbjct: 526  GGIRHIIDNHV---SEWKPPTSKRIKCCSANTRQILIALSGGEVIYFEIDESHALVEIFK 582

Query: 526  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIP 582
                 +I+C+ I  +  +  YS   A+    ++ V++ SL     L  ++ + L      
Sbjct: 583  RNFGVDITCMAIQAVPTDRVYSSFGAISGLDNV-VKLISLEKEKGLKQLSTQLLPNNATA 641

Query: 583  RSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
             SV +   + +             +L+  L  G ++   ++  TG L+D+    LG + +
Sbjct: 642  ESVCIAQIDSLVRDAGHMRRNSSLFLVVGLNTGVMIRSNIDAITGALSDQHSRFLGARAV 701

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
                    +     A SD+  + Y+   KL  S +N   V H+  F S+   D       
Sbjct: 702  RFSLVKVGDGMGFMAMSDKSWLCYAHQGKLFTSYINYDMVEHVASFCSSHCSDGFVAISG 761

Query: 691  GELTIGTIDDIQKLHIRSI-PLGEHPRRI------------------------------- 718
              L I    ++ +   +S+ PL   PR+I                               
Sbjct: 762  NSLRIYRCLNLGQEFSQSVAPLTYTPRKISILPSLSPITDNGTETGVTKNRHMLAIVECD 821

Query: 719  --CHQEQSRTFAICSLKN----QSCAEESEMHF-----------VRLLDDQTFEFISTYP 761
               + E +RT     L+N       AE+ E+             VR++D  T    +   
Sbjct: 822  HNTYDELTRTEIKKGLENIMPEGEQAEDVELGLYKAGEGKWGSCVRIIDPTTLSTAAKLL 881

Query: 762  LDTFEYGCSILSCSFSDDSNVYYCVG----TAYVLPEENEPTKGRILVFIVEDGKLQLIA 817
            LDT E   S  +C    D   Y C+     T + L   N  +    +     + ++  + 
Sbjct: 882  LDTDEAAISCCAC----DLEGYRCLAVGTVTGWNLANSNSNSCHIRMYAYGPNFEITFLH 937

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHIL-------- 869
              +  G   +L A+ G+LLA +   + LY       G R+L  +  + G ++        
Sbjct: 938  STKVTGIPRALLAYEGRLLAGVGPDVILYAL-----GKRQLLKKAEYRGGVIDIQGYGVA 992

Query: 870  ------------ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
                         +++   G+ I VGD+ +SI++L +  +   +     D    W++   
Sbjct: 993  TPRTIGNGGLFGVMWLGASGNRIFVGDIRESITVLKFDEQMAKLSLICDDIRPRWITGAT 1052

Query: 918  ILDDDIYLGAENNFNLFTV-RKNSEGATDE-----ERGRLEVV--------------GEY 957
            +LD    +   + F+ F V R  SE +          G LE V               ++
Sbjct: 1053 VLDHHT-VALVDKFDTFAVCRVPSEASASNLSSALNSGSLEAVMPTILGVGNKFEQEAQF 1111

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNL 1016
            HLG+        +L         G    V++ T+ G IG +I  +  ++   L+ L+  +
Sbjct: 1112 HLGDLSTCIDKVTLCS-------GCTEAVVYATILGSIGALIPFISSDELDTLQHLELLM 1164

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
                  + G  H  +RS+    + V     +DGDL E F  L       I+  ++ +V E
Sbjct: 1165 ANENPPLSGREHSIYRSYYGPVQHV-----IDGDLCEEFESLDSITQSRIAAKIDKTVTE 1219

Query: 1077 LCKRVEEL 1084
            + K++ ++
Sbjct: 1220 IIKKLRDI 1227


>gi|342888540|gb|EGU87812.1| hypothetical protein FOXB_01669 [Fusarium oxysporum Fo5176]
          Length = 1408

 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 200/829 (24%), Positives = 350/829 (42%), Gaps = 124/829 (14%)

Query: 229  VLIIGEETIVYCSANAFKAIPIRPSITKAYGRVD-------------------ADGSRYL 269
            VL+  EE+I Y   N     P+R  I +  G  +                   AD   +L
Sbjct: 592  VLVFAEESITYHHLNQ---DPLRVPIPRRRGATEDLPRKRTIIGGVMHKLKNTADAFFFL 648

Query: 270  LGDHAG-LLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
            L    G LL L    H+ E     +V  +KI+      +AS++  L    +++ + +G+ 
Sbjct: 649  LQTEDGDLLKLTFDMHDSEGSLAGEVRRIKIKYFDTVPVASSLCILKTGFLFVAAEFGNH 708

Query: 324  ---QLIKLNLQPDA-------------KGSYVEV------------LERYVNLGPIVDFC 355
               Q+ KL    DA             +G+Y  V            LE   +L P++D  
Sbjct: 709  HFYQIEKLGEDDDAEPVITSDDFSTGPRGAYQPVYFDPRPLKNLALLESIDSLSPLLDCE 768

Query: 356  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFD 414
            V D   +G  Q+ + SG        ++++G+ IN+ AS +L G + G+W+ R +  D FD
Sbjct: 769  VADPTGEGPPQIYSESGNGARSHFWMLKHGLEINKVASSDLPGTVSGVWTTRMTRHDKFD 828

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
            ++++++  S    + M++ DE+E+    GF +   TL       + +VQ+ S  +R + +
Sbjct: 829  SYIILT--SSDGTVVMSVGDEVEQVSDSGFLTTVTTLAIQQIGDDGIVQIHSKGIRHLRA 886

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQ-LEYEI 532
                  NEW +P   S+   T N  Q+ +A   G +VY E+  DG L E    + +   +
Sbjct: 887  GQI---NEWPAPQHRSIVAVTTNKRQIAIALSSGEIVYFEVDSDGSLAEYDETKVISTTV 943

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFE 591
            +CL + P+ E    S +  VG   D +VRI  L PD  L +        +P ++++ A E
Sbjct: 944  TCLSLGPVPEGRLRSPLLVVGC-EDCTVRILGLNPDSMLESNSIKTLTAVPSALIIMAME 1002

Query: 592  ---GISYLLC---ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
                 S  LC    L  G  L   +N  TGEL+D +   LG + I L   + K  T V A
Sbjct: 1003 HPLTSSSGLCLHIGLSSGVYLRTGMNEITGELSDTQTRFLGLKAIKLFQVTVKGQTCVLA 1062

Query: 646  ASDRPTVIYSSNKK-LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 704
               +P + Y   K+    + +  +E+     F+S    + +       L I +++++   
Sbjct: 1063 LGSKPWMGYIDPKRGFTMTPLECEELHWASSFSSEQCQEGIIAIHANFLHIFSVENLHNN 1122

Query: 705  HIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV--------RLLDDQTFE 755
             +R SIPL   PR          F    + N + + E     +        ++L  + F 
Sbjct: 1123 VVRKSIPLTYTPRHFVKHPAEPYFYTIEVDNNTLSPELRAQLLAVDDHGDDKVLPPELFG 1182

Query: 756  F---------------------ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VL 792
            +                     +    L+  E   SI    F S D  ++  VGT   ++
Sbjct: 1183 YPRGNGRWASCISIIDPIGEQVLQRIDLEGNEAAISIAVAPFTSQDGEIFLLVGTGKDMI 1242

Query: 793  PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
                + + G I V+   ++G+ LQ I + + +    +L AF  +L   + + + +Y    
Sbjct: 1243 LNPRQSSGGYIHVYRFHQNGRELQFIHKTKVEEPPMALVAFRDRLAVGLGKDLCIY---- 1298

Query: 851  RDDGTRELQSECGHHGHI-----LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 905
             D G ++L  +     HI     L + + T+GD IVVGD+ + ++++++ HEE  +    
Sbjct: 1299 -DLGLKQLLRKA----HIEAAPQLIVSLDTQGDRIVVGDVQQGMTMVMFNHEEQRLIPFV 1353

Query: 906  RDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRL 951
             D  A W +   ++D +  +G +   N++ VR   K S    D  R  L
Sbjct: 1354 DDIIARWTTCTTMVDYESVVGGDKFGNIWIVRCPKKTSHHVGDYARNYL 1402


>gi|353442065|gb|AER00318.1| xeroderma pigmentosum group E, partial [Hydra vulgaris]
          Length = 156

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/154 (53%), Positives = 110/154 (71%), Gaps = 1/154 (0%)

Query: 911  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 970
            NWM+AVEI+DDD +LGAEN+FNLF  +K++    DEER  L+ +G+YHLG+FVN F+HGS
Sbjct: 2    NWMTAVEIIDDDTFLGAENSFNLFICQKDNSSVNDEERHHLQTIGKYHLGDFVNVFKHGS 61

Query: 971  LVMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
            LVM      +  I  ++++GTV G IG++A LP   + FL ++Q  L K IK VG + HE
Sbjct: 62   LVMHHSTEQLTPISSSILYGTVRGAIGLVAGLPKNTFDFLSQVQEKLSKTIKSVGKIEHE 121

Query: 1030 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
             WRSF N+KKT  A   +DGDLIES LDL+RT+M
Sbjct: 122  FWRSFYNDKKTDLAVGCVDGDLIESCLDLTRTQM 155


>gi|358060450|dbj|GAA93855.1| hypothetical protein E5Q_00501 [Mixia osmundae IAM 14324]
          Length = 1153

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 201/915 (21%), Positives = 392/915 (42%), Gaps = 124/915 (13%)

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            L+    G L+ + +  ++E+V  LKI+      +AS++  L +  +++ S +G+  + + 
Sbjct: 257  LVQSEEGDLYKVTVERQEEEVLALKIKYFDTVPVASSLCILRSGFLFVASEFGNHNVYQF 316

Query: 329  N------------------LQPDAKGSYVE--------VLERYVNLGPIVDFCVVDLERQ 362
            +                  ++ +   ++ +        +++   +L PIVD  V ++   
Sbjct: 317  DKLGDDGDEVSSADYPSFGMEREEPATFFKPRPLENLVLVDELDSLCPIVDAKVANVLGA 376

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK--GMWSLRSSTDDPFDTFLVVS 420
               Q++T  G     SL+++R+G+ + E  S  L G +  G+W+ +  +DD +D+++V+S
Sbjct: 377  DAPQIITACGRGHRSSLKMLRHGLEVEEMVSSGL-GFEPTGLWTTKLKSDDTYDSYIVLS 435

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV-TSGSVRLVSSTSREL 479
              + T +L +   + +E+    G     +TL       + +VQV  +G +R+ +  S+E+
Sbjct: 436  APAATIVLTIG--ESIEQASNSGLVENQRTLCVQQVGDDSIVQVHPAGFLRVRADGSKEV 493

Query: 480  RNEWK-SPPGYSVNVATANASQVLLATGGGHLVYL--EIGDGILTEVKHAQLEYEISCLD 536
               W  +P   ++ VA AN  Q++LAT  G ++YL  E+   I       QL   ++ + 
Sbjct: 494  ---WPLAPERVNLAVACANQRQIVLATTSGDIIYLRCELDGEITVFDDRKQLGVSVTSMS 550

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAF----- 590
            I  + E+   +    VG   D +VRI SL + N +    +     +P S+ +        
Sbjct: 551  IGELSEDRLQTDYLCVGC-EDQTVRIISLQEQNCLETISIQALTALPSSICIAEILDSSV 609

Query: 591  ---EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 647
                  +++   L +G LL  +L+  +G LTD +   LGT+P+ LR  +  +++ V + S
Sbjct: 610  DKTRPTTFVNIGLQNGVLLRTVLDPMSGRLTDTRTRFLGTRPVKLRRLAIGDSSGVLSIS 669

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHI 706
             R  V Y+    L +  +    + H     +   P+ +       L I T+  I  K+ +
Sbjct: 670  SRTWVNYTHQGLLQFDPLISDPLDHATGLRAEVCPEGIIGVTGDTLRIFTLPKIGTKVKM 729

Query: 707  RSIPLGEHPRRICH----------QEQSRTFAICSL--KNQSCAEESEMHF--------- 745
             SIPL   PRR             Q   RT +  +   K +   E SE  +         
Sbjct: 730  DSIPLSLTPRRTAFHPAGTLLYMIQSDHRTLSPITQEEKAKDLMEPSEAMWTAEINGLMR 789

Query: 746  ---------VRLLDDQTFE--FISTYPLDTFEYGCSILSCSFSDDSNVYY-CVGTAY--- 790
                     + ++D    E   ++   LD  E   S+    F++    ++  VGTA    
Sbjct: 790  AEAGQWSSCISIIDPTEPENATVTQIYLDNNEAAFSVAVAQFAERPGKWFLLVGTAQDTT 849

Query: 791  VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
            V P     T G I  + I E G+ L+L+ + E      S+ AF G+ +  + + ++LY  
Sbjct: 850  VSPRTC--THGFIRTYEITEAGRSLELLHKTELDDVPLSIAAFQGRAVVGVGRALRLYTM 907

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
                  +R L+           + +Q +G  I   D   S+  + YK  +  +   A D 
Sbjct: 908  ----GKSRLLRKSENKSFPAAVVSLQVQGSRIYASDAQDSVYFVAYKAADNRLLIFADDT 963

Query: 909  NANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEGATDEERG---------------R 950
               W++   ++D D     +   N+F  R +   SE   +++ G               R
Sbjct: 964  QQRWITCNTVVDYDTVASGDKFGNVFVSRVDKLVSEDVDEDQTGAGILHEKPLFMGAPHR 1023

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFL 1009
            L+++  +++G+ +   +  SLV        G    +++  + G +G+ I  +  E   F 
Sbjct: 1024 LQLLTHFNVGDILTCIQKVSLV-------AGGREILLYTCLGGTVGMLIPFISKEDVEFS 1076

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
              L+ ++R     + G +H  +R +      V  K  +DGDL E+F  L   +  +I+  
Sbjct: 1077 STLEMHMRAENPSIVGRDHLAYRGYY-----VPQKATVDGDLCETFALLPMQKQAQIAGE 1131

Query: 1070 MNVSVEELCKRVEEL 1084
            ++ SV E+ K+++ +
Sbjct: 1132 LDRSVSEVLKKIDSM 1146


>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
           queenslandica]
          Length = 1214

 Score =  169 bits (429), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 184/819 (22%), Positives = 357/819 (43%), Gaps = 92/819 (11%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
           Y +T  KP+ +T +  GNF+  +   +++A+   +E+    P    +  ++   ++G I 
Sbjct: 4   YALTLQKPSCITAAVHGNFSGRKAQEVVVARGKVLELLRPDPNTGKVVELVSTEVFGLIR 63

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
           +L  FR  G  +D++ + ++  +  +L++D   + +  +   +   + G R    GQ   
Sbjct: 64  SLITFRLTGSTKDYIVLGSDSGRIVILEYDPVKN-VFEKVHQETYGKSGCRRIVPGQYLA 122

Query: 123 IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL-------DIKF---LY 170
           +DP  R  +IG      L  ++  D+  +L  +  +   +   L       D+ F   L+
Sbjct: 123 VDPKGRALMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTLVYHVVGVDVGFENPLF 182

Query: 171 GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV 222
            C +    + Y+++ +    +  +VA ++  + E     N+        LD+ A++LI V
Sbjct: 183 ACLE----LDYEESDNDHTGEAAQVAQQNLTYYELDLGLNHVVRKYSEPLDDMANMLITV 238

Query: 223 PPPL---CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVD-ADGSR----------- 267
           P       GVL+  E  I+Y   N      IR  I +    +D AD S            
Sbjct: 239 PGGTDGPSGVLVCCENYIIY--KNFGDQPDIRCPIPRRQNDLDDADRSMLIITSAMHKTK 296

Query: 268 ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
               +LL    G +  +++  E + V  +KI+      + S++  L + +++  S +G+ 
Sbjct: 297 HLFFFLLQSEQGDIFKVMLDVEDDIVVRIKIKYFDTVPVCSSLCVLKSGLLFCSSEFGNH 356

Query: 324 QLIKL-NLQPDAKGSY---------------------VEVLERYVNLGPIVDFCVVDLER 361
            L ++ +L  D++  +                     + +++   +L PI+   + DL  
Sbjct: 357 YLYQIAHLGDDSEREFHSDYPLEEGETFFFGPRPLKNLILVDEMESLSPIMSCQIADLAN 416

Query: 362 QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVS 420
           +   Q+    G     SLR++R+G+ + E A  EL G    +W+++  + + FD+++VVS
Sbjct: 417 EDTPQLYAACGRGPRSSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSYIVVS 476

Query: 421 FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
           F++ T IL++   + +EE    GF   T TL C     + L+Q+    +R + S  R   
Sbjct: 477 FMNATLILSIG--ETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIRSDKRV-- 532

Query: 481 NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDIN 538
           NEW+SP    +     N  QV++A  GG +VY E+   G L E  +  ++  E+ C+ + 
Sbjct: 533 NEWRSPGKRLIRQCAVNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICISLG 592

Query: 539 PIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEG----- 592
            +       +  AVG+ +D +VRI SL P   L          +P S+ +    G     
Sbjct: 593 SVPPGQQRCRFLAVGL-SDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNVSDD 651

Query: 593 --IS----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
             +S    +L   L +G LL   L+  TG+L+D +   LGT+P+ L     + T  V A 
Sbjct: 652 TTVSTGGLFLNIGLQNGVLLRTALDNVTGDLSDTRTRYLGTRPVKLFRVRIQGTEGVIAV 711

Query: 647 SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 706
           S R  + Y+   +   + ++   + +   F S   P+ +       L I  ++ +  +  
Sbjct: 712 SSRTWLNYTYQSRFHLTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRILALEKLGVVFN 771

Query: 707 R-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
           + S PL   PR++          +    + +  E +++H
Sbjct: 772 QVSTPLQYTPRKLLIHPPMSNLVLIETDHNAFTEATKLH 810



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 157/345 (45%), Gaps = 44/345 (12%)

Query: 766  EYGCSILSCSFSDDSNV--YYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKE 820
            E   S+  C F    ++  +  VGTA  ++      + G ++VF +  DG KL+ +   +
Sbjct: 882  EAAFSLAVCQFVSKGDLEWFVVVGTAKDMIITPRAISSGSLIVFRLSPDGSKLEHVHTTQ 941

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDF 879
                  ++  F G+LL  + + +++Y     D G +++  +C   H   L + ++  G  
Sbjct: 942  LDDVPIAMAPFQGRLLVGVGKLLRIY-----DIGKKKMLRKCENKHLPYLVVDIKVMGRR 996

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
            + VGD+ +++  L Y+  E  +   A +    + +   ILD +    A+   N+  +R  
Sbjct: 997  VYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNITILRLP 1056

Query: 940  SEGATDE------------ERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
            S+  TD+            +RG L        V+  YH+GE +N     SL+        
Sbjct: 1057 SD-VTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGEGINTLHKVSLI-------P 1108

Query: 981  GQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
            G    +++ T++G IG++      E   F + L+ ++R     + G +H  +RS+     
Sbjct: 1109 GGSEVLVYTTLSGSIGILVPFSSKEDSDFFQHLEMHMRSEWSNLVGRDHLSFRSY----- 1163

Query: 1040 TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             V  K+ +DGDL E +  L  ++  EI+  ++ S  E+ K++E+L
Sbjct: 1164 YVPVKSVIDGDLCEVYNSLDPSKRREIALDLDRSPSEVAKKLEDL 1208


>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
          Length = 1146

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 218/1002 (21%), Positives = 409/1002 (40%), Gaps = 163/1002 (16%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
           ++ Y +T  + T ++H+  GNF+  +   +++++   +E  LL P      +  +L + +
Sbjct: 1   MFLYNITLQRATGISHAIHGNFSGTKMQEIVVSRGKILE--LLRPDANTGKVHTLLTMEV 58

Query: 59  YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDN 117
           +G + +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    
Sbjct: 59  FGIVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHP-SKNMFEKIHQETFGKSGCRRIVP 117

Query: 118 GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
           GQ   +DP  R  +IG      L  ++  D   +L  +  +   +   L    +    G 
Sbjct: 118 GQYLAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGF 177

Query: 173 AKPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIP 221
             P    L  D ++A +  T E A   +    F E     N+        L+   + LI 
Sbjct: 178 ENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLIT 237

Query: 222 VP-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------- 267
           VP     P   GVLI  E  I Y   N      IR  I +    +D D  R         
Sbjct: 238 VPGGSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSAT 292

Query: 268 --------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                   +L     G +  + +  ++E VT ++++      +A+ +  L    +++ S 
Sbjct: 293 HKTKSMFFFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASE 352

Query: 320 YGDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC 355
           +G+  L ++                          QP    + V V E+  N+ PI+   
Sbjct: 353 FGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQE-NMSPIMSCQ 411

Query: 356 VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFD 414
           + DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W++R   +D FD
Sbjct: 412 IADLANEDTPQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFD 471

Query: 415 TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
            +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +
Sbjct: 472 AYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRA 529

Query: 475 TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEI 532
             R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++
Sbjct: 530 DKR--VNEWKTPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADV 587

Query: 533 SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCA 589
            C+ +  +      S+  AVG+  D +VRI SL     L  ++ + L  +  P S+ +  
Sbjct: 588 VCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVE 644

Query: 590 FEGIS--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
             G+               YL   L +G LL  +L+  TG+L+D +   LG++P+ L   
Sbjct: 645 MGGVEKQDELGEKGTMGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRV 704

Query: 636 SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
             +    V A S R  + YS   +   + ++ + + +   F S   P+ +       L I
Sbjct: 705 RMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRI 764

Query: 696 GTIDDIQKLHIR-SIPLGEHPRR-ICHQE-----------QSRTFAICSLKNQSCAEE-- 740
             ++ +  +  + + PL   PR+ + H E            + T A  + + Q  AEE  
Sbjct: 765 LALEKLGAVFNQVAFPLQYTPRKFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMV 824

Query: 741 -----------SEM-------------------------HFVRLLDDQTFEFISTYPLDT 764
                      +EM                           VRL++      +    L+ 
Sbjct: 825 EAAGEDERELAAEMAAAFLNENLPESIFGAPKAGAGQWASLVRLVNPIQGTTLDQVQLEQ 884

Query: 765 FEYGCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKE 820
            E   S+  C F +  + +Y  VG A  ++      + G I  + +  G  KL+ + +  
Sbjct: 885 NEAAFSVAVCRFLNTGDDWYVLVGVARDMILNPRSVSGGFIYTYRLTGGGEKLEFVHKTP 944

Query: 821 TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 862
            +    ++  F G++L  + + +++Y     D G ++L  +C
Sbjct: 945 VEDVPLAIAPFQGRVLIGVGKLLRIY-----DLGKKKLLRKC 981



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 13/136 (9%)

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLF 1008
            + EVV  YH+GE V   +  +L+        G   ++++ T++G IG++     HE + F
Sbjct: 1017 KAEVVVNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDF 1069

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 1068
             + L+ ++R     + G +H  +RS+         KN +DGDL E F  +   +   +++
Sbjct: 1070 FQHLEMHMRSEFPPICGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMDTHKQKSVAE 1124

Query: 1069 TMNVSVEELCKRVEEL 1084
             ++ +  E+ K++E++
Sbjct: 1125 ELDRTPPEVSKKLEDI 1140


>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
          Length = 1133

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 185/788 (23%), Positives = 332/788 (42%), Gaps = 136/788 (17%)

Query: 409  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
            T D FD +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    
Sbjct: 364  TTDEFDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDG 421

Query: 469  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHA 526
            +R + +  R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  
Sbjct: 422  IRHIRADKR--VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERK 479

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSV 585
            ++  ++ C+ +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +  
Sbjct: 480  EMSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPE 536

Query: 586  LLCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
             LC  E                G  YL   L +G LL  +L+  TG+L+D +   LG++P
Sbjct: 537  SLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRP 596

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            + L     +    V A S R  + YS   +   + ++ + +     F S   P+ +    
Sbjct: 597  VKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIS 656

Query: 690  EGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQS 736
               L I  ++ +  +  + + PL   PR+ + H E +            T A  + + Q 
Sbjct: 657  TNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQ 716

Query: 737  CAEE-------------SEM-------------------------HFVRLLDDQTFEFIS 758
             AEE             +EM                           +R+++      + 
Sbjct: 717  MAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLD 776

Query: 759  TYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQ 814
               L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+
Sbjct: 777  LVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLE 836

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-------H 867
             + +   +    ++  F G++L  + + +++Y     D G ++L  +C +          
Sbjct: 837  FLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKCENKAFLADGSSS 891

Query: 868  ILALYV------------QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +  +YV            QT G  ++V D+ +S   + YK  E  +   A D    W++ 
Sbjct: 892  VFPMYVAVRHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTT 951

Query: 916  VEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEY 957
              +LD D   GA+   N+  VR   N+    DE         +RG L       EV+  Y
Sbjct: 952  ASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNY 1011

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNL 1016
            H+GE V   +  +L+        G   ++++ T++G IG++     HE + F + ++ +L
Sbjct: 1012 HVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHL 1064

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
            R     + G +H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E
Sbjct: 1065 RSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPE 1119

Query: 1077 LCKRVEEL 1084
            + K++E++
Sbjct: 1120 VSKKLEDI 1127



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/427 (19%), Positives = 171/427 (40%), Gaps = 54/427 (12%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
           Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4   YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
           +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64  SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123 IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
           +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123 VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178 VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
             L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183 ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224 --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
             P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243 DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268 ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
              +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  
Sbjct: 298 MFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNQW 357

Query: 325 LIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-----VVDLERQGQGQVVTCSGAYKDGSL 379
           L+K+ +  D   +Y+ V   +VN   ++        V D    G    ++CS    D  +
Sbjct: 358 LVKVLITTDEFDAYIIV--SFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALV 415

Query: 380 RIVRNGI 386
           ++  +GI
Sbjct: 416 QVYPDGI 422


>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
          Length = 1294

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 203/870 (23%), Positives = 356/870 (40%), Gaps = 148/870 (17%)

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 405
            +L P+  + + D   +G  Q+V  SG    GS + +R G    E A  EL G   G++++
Sbjct: 404  SLAPLTCWQIGDFYGEGSPQIVVGSGRRHRGSWKTLRLGYRWTEMAVSELPGYPVGVFTV 463

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            R    D +D++++VSF++ + +L++   + +EE    GF +   T+F      N +VQV 
Sbjct: 464  REQQQDSYDSYIIVSFVNASLVLSVG--ETVEEVSDSGFSTFVSTIFVQLFSNNSIVQVH 521

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 524
            +  +R +    + + +EWK P G  + VA  NASQ+++      L+Y E+ + G+LTE++
Sbjct: 522  AQGIRHIRPDLQTV-HEWKPPKGLFIQVADGNASQLVIILNSKQLLYFELDETGMLTEIQ 580

Query: 525  HAQL----EYEIS----CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
              +L     YE S    C+ I P+    S +   AV        R++SL   + +    L
Sbjct: 581  EVELIQDQSYESSSFLPCVSIAPLVAGQSKASFVAVSDGISYYTRLYSLKKESCLKPISL 640

Query: 577  GG-EIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
               + +  SVLL      +       LL     G  +  L++  TG L++++   +GTQP
Sbjct: 641  QALDTVANSVLLIGLSAPASSRSELVLLIGSHSGIYIRALVDPITGALSEQQSRLVGTQP 700

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS-NVNLKEV-SHMCPFNSAAFPDSLAI 687
            + L+    +        S R  ++Y  N  LL +  +    V  H+  F S   PD +  
Sbjct: 701  VRLQRIEIQGKPVALVVSSRSYLVYLDNHLLLQTLPIGYDWVFDHVVGFCSEQCPDGVIA 760

Query: 688  AKEGELTIGTIDDIQKL-------HIRSIPLGEHPRRICHQEQSRTFAICSL-KNQSCAE 739
                 L I + ++ + L       H  + P    PRR+  +E   + +I +  +N+    
Sbjct: 761  CCGSSLCILSFEEDRDLFQTTHLFHSDTQPSLYTPRRLVDREDILSSSITNYTRNRILTL 820

Query: 740  ESEMHFVRLLDD-------------------------QTFEFIST--------------- 759
            E +   V    D                         Q   F+                 
Sbjct: 821  ECDQQIVISPQDIVSHSSSLRQTGYPLGPIGSWSCAIQQMTFMDNQFPNHEDPVESTSCR 880

Query: 760  -------YPLDTFEYGCSILSCSFS-DDSNVYYCVGTA--YVL----PEENEPTKGRI-- 803
                   Y  +T EY  SI    FS D S++Y CVG    Y L    P E  PTK  I  
Sbjct: 881  WQQKCEIYNSETKEYISSICCIRFSHDSSSLYLCVGVVMDYALQVTNPLEKNPTKDNIDI 940

Query: 804  ----LVF---------------------IVEDGKLQLIAEKETKGA-------------- 824
                +VF                      ++D     +      GA              
Sbjct: 941  QRESIVFPRSEIRVYRWNETQWEYIHTTPIQDASSHRMEWNYDYGASHLSFHAASRYRNE 1000

Query: 825  -VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFI 880
             + ++ +F G LL A+   +++Y     D G ++L  +  H     H +   ++T  D I
Sbjct: 1001 IITTMASFQGHLLVAVGTSLRMY-----DLGKKQLLKKTQHPRATPHKITC-IETCYDRI 1054

Query: 881  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
             + D+ +S+ L  Y   +      A DY   W + + +LD D     +   N+  +R   
Sbjct: 1055 FLSDVQESVFLYRYSAADNLFLCIADDYLPKWCTTMCLLDYDTVAIGDKMGNISILRLPP 1114

Query: 941  EGAT----DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD--VGQIPTVIFGTVNGV 994
            E  T    D   G L     +H  +    +  GS++  L   +   G +P + +GT++G 
Sbjct: 1115 EAGTFIEQDPTGGLLSKEAPHHF-QLEACYYVGSVIQCLSKVEWTTGDVPLLFYGTLDGA 1173

Query: 995  IGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
            IGV+  L     +   + L+  LR+    + G +H  +RS+         ++ +DGDL E
Sbjct: 1174 IGVMIPLRSTLDMELFQALELQLREYRSPLCGRHHLAYRSY-----FFPVRHVIDGDLCE 1228

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
             F  LS  + ++I K ++ S+ ++ +++E+
Sbjct: 1229 EFYRLSLEQQEKIVKELDRSIVDVHRKLED 1258



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 6  YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
          Y +T  +P+ +  S  G+F++P+ + L++ + T +E+     QG L+ +    IYG I +
Sbjct: 4  YNLTLQRPSAIYFSVHGSFSAPRAIELVLGRQTSLELVRPDEQGHLKSLCFQEIYGIIRS 63

Query: 65 LELFRPHGEAQDFLFIATERYKFCVLQWDAES 96
          L+ FR  G  +D+L I ++  K  VL ++  +
Sbjct: 64 LKAFRLTGAKRDYLLIGSDSGKITVLLYNPST 95


>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
          Length = 1216

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 187/834 (22%), Positives = 353/834 (42%), Gaps = 98/834 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  ML V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGTKMQEILVSRGKSLELLRPDPNTGKVHTMLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +L  FR  G  +D++ + ++  +  +L++   +  +  +   +   + G R    GQ
Sbjct: 61  IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEY-VPAKNVFEKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120 YLAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHMVGVDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
           P    L  D ++A    T E A+K +    F E     N+        L+  A+ L+ VP
Sbjct: 180 PMFACLEIDYEEADTDPTGEAAIKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVP 239

Query: 224 -----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------- 267
                P   GVLI  E  + Y   N      IR  I +    +D D  R           
Sbjct: 240 GGNDGP--SGVLICSENYLTY--KNLGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHK 294

Query: 268 ------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
                 +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +G
Sbjct: 295 TKSMFFFLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPVANSMCVLKTGFLFVASEFG 354

Query: 322 DSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVD 358
           +  L ++             +  P  +G       R +          +L PI+   V D
Sbjct: 355 NHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVAD 414

Query: 359 LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
           L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ FD ++
Sbjct: 415 LANEDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEFDAYI 474

Query: 418 VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
           +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475 IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR 532

Query: 478 ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C+
Sbjct: 533 --VNEWKAPGKKTIIKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCM 590

Query: 536 DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-GI 593
            +  +      S   AVG+  D +VRI SL   + +    +  + +P +   LC  E GI
Sbjct: 591 ALGNVAAGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGI 647

Query: 594 S--------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                          +L   L +G LL  +L+  +G+L+D +   LG++P+ L     + 
Sbjct: 648 KDDTSEDSNQMQSTLHLNIGLQNGVLLRTVLDPISGDLSDTRTRYLGSRPVKLFRIRMQG 707

Query: 640 TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
              V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  ++
Sbjct: 708 NQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALE 767

Query: 700 DIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDD 751
            +  +  + S P    PR+ + H E +    I +  N    E  +   +++ ++
Sbjct: 768 KLGAVFNQVSFPFEYTPRKFVIHNESAHVLLIETEHNAYTEETKQQRRLQMAEE 821



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 39/275 (14%)

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKS 888
            + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D+ +S
Sbjct: 954  YQGRVLVGVGKMLRLY-----DMGKKKLLRKC-ENKHIPNAVICINAIGQRIYVSDVQES 1007

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE--GATDE 946
            +  + YK +E  +   A D +  W++   +LD D    A+   N+  +R  S      DE
Sbjct: 1008 VYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASSINDDVDE 1067

Query: 947  ---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
                     +RG L       + V  +H+GE V   +  +L+        G   ++++ T
Sbjct: 1068 DPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSESLVYTT 1120

Query: 991  VNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            ++G +GV+     HE + F + L+ ++R     + G +H  +RS+         KN +DG
Sbjct: 1121 LSGTVGVLVPFTSHEDHDFFQHLEMHMRAEHPPLCGRDHLSFRSY-----YYPVKNVIDG 1175

Query: 1050 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1176 DLCEQFNSIEPGKQKSISGDLERTPSEVSKKLEDI 1210


>gi|226480826|emb|CAX73510.1| glyceraldehyde 3-phosphate dehydrogenase [Schistosoma japonicum]
          Length = 332

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 167/328 (50%), Gaps = 38/328 (11%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           Y VT  +PT V  +C G+FTSP +LNL+I K T +E+  +T +GL+ + DVPI  +I   
Sbjct: 5   YHVTTQRPTAVVKTCTGHFTSPNDLNLLICKNTYVEVFEVTCEGLKLIRDVPINAKIVAA 64

Query: 66  ELFRPHGEAQDFLFIATERYKFCVLQW--DAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            LFR      D LF+ T +    +++   + +S E +T A G V DR  R  D G   +I
Sbjct: 65  SLFRRKDRETDSLFLLTHKAGVAIIECVRNNDSVEFVTVASGSVEDRSARIIDQGFDVLI 124

Query: 124 DPDCRLIGLHLYDGLFKVIP------------FDNKGQLKEAFNIRLEELQVLDIKFLYG 171
           DP    I + LY GL K+I              D        +++R+EE  ++D+ F+YG
Sbjct: 125 DPGANYIVVRLYHGLLKIILLQCIGDKIGTDFLDTNQWTVNTYSVRIEEGNIVDMAFIYG 184

Query: 172 CAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLI 231
            + PT  ++Y+D     H+KTYE+  ++        + ++++  + LLIPVP P  GV++
Sbjct: 185 YSLPTFAMIYEDEL-VLHMKTYEIYGREPALRNVQLTLDSIEPDSKLLIPVPKPYGGVIL 243

Query: 232 IGEETIVYCSANA---FKAIP-IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHE-- 285
           +G+  I Y + +     + IP  + S    Y  VDA   RYLLGD AG L+++ +  E  
Sbjct: 244 VGDNIICYHTKDGPHISQYIPQAKASQVLCYAAVDA--QRYLLGDMAGRLYMVHLLSEDI 301

Query: 286 ---------------KEKVTGLKIELLG 298
                            ++  ++IELLG
Sbjct: 302 SAAANNGACSSDSLSAVRIGSIRIELLG 329


>gi|302654421|ref|XP_003019018.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
 gi|291182708|gb|EFE38373.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
          Length = 802

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 184/735 (25%), Positives = 319/735 (43%), Gaps = 89/735 (12%)

Query: 2   SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
           S++ Y +T   PT +T + +G F+  +E  ++ A  +++ +H   P QG +Q +    ++
Sbjct: 6   SMFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPSQGKVQTLFSQDVF 65

Query: 60  GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
           G I +L  FR  G ++D++ I ++  +  ++++   +     R   +   + G R    G
Sbjct: 66  GIIRSLAAFRLAGSSKDYIIIGSDSGRITIVEY-VPAQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119 QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
           Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125 QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYE 184

Query: 169 --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             ++   +     + QD     + +T      YE+ L     V   W+ + +D  A +L 
Sbjct: 185 NPIFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRR-WA-DPVDRTASMLF 242

Query: 221 PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
            VP       GVL+  E+ IVY  +N  AF+  IP R  P+      R    G       
Sbjct: 243 QVPGGADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENPERKRCITAGVMHKMRG 302

Query: 268 ---YLLGDHAGLLH---LLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
              +LL    G L    + ++  E EK TG    LK++      +AS++  L +  +++ 
Sbjct: 303 AFFFLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVA 362

Query: 318 SSYGD-----------------------SQLIKLNLQP----DAKGSYVEVLERYVNLGP 350
           S  G+                       S +I   L P          + ++E   +L P
Sbjct: 363 SETGNQHFYQFEKLGDDDDEIEFISDDYSAVISEPLPPVYFRPRPAENLNLVESIASLNP 422

Query: 351 IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
           ++   + ++  +   Q+ T  G     S R +++G+ ++E    EL  +   +W+ + S 
Sbjct: 423 LMAASIANITEEDAPQIYTLCGTSARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSR 482

Query: 410 DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
           +D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483 NDQFDAYIVLSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470 RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
           R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541 RHIHADQR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQ 598

Query: 528 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV- 585
           +   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599 MSGTVTCLSLGEVPEGRGRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657

Query: 586 LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
           ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L + S K  
Sbjct: 658 IMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQ 717

Query: 641 THVFAASDRPTVIYS 655
             V A S R  + YS
Sbjct: 718 RAVLALSSRSWLGYS 732


>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
          Length = 1285

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 260/1237 (21%), Positives = 507/1237 (40%), Gaps = 179/1237 (14%)

Query: 1    MSIWNYVVTAHKPTNVTH-SCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPI- 58
            M ++N  +   +P+   H + VG F+  ++  +++AK +R+E  LL P      +++ + 
Sbjct: 68   MHLYNLTL---QPSGSVHATAVGQFSGTRQQEIVVAKGSRLE--LLRPDTQTGKVEIIVS 122

Query: 59   ---YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RP 114
               +G I +L  FR  G ++D+L + ++  +  +L++   SS    +   +   R G R 
Sbjct: 123  SDAFGVIRSLAAFRLTGGSKDYLIVGSDSGRIVILEYQP-SSNSFDKVHQETFGRSGSRR 181

Query: 115  TDNGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAF--NIRLEELQVLD 165
               GQ    DP  R  +IG      L  ++  D +  L      EA   N  +  +  +D
Sbjct: 182  IVPGQYLATDPKGRATMIGAMEKAKLVYILNRDAEANLTISSPLEAHRPNGIIHHIVGVD 241

Query: 166  IKF---LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNL--------DN 214
            + F   L+ C +   V   + ++DA   + +E A K   + E     N++        D 
Sbjct: 242  VGFENPLFACLE---VDNSESDRDASG-RAFEEAEKTLTYYELDLGLNHVVRRWAEPVDP 297

Query: 215  GADLLIPVPPPL----------CGVLIIGEETIVYCSANAFK-AIPI--------RPS-- 253
             ++LLI VP              GVL+  E+ I Y   +  +  +PI        RP+  
Sbjct: 298  RSNLLIQVPGGYNQNQEKWDGPSGVLVCSEDYITYKHQDQPEHRVPIPKRLNPIERPNER 357

Query: 254  ----ITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYL 309
                I  +      +   +L+    G L  + + H+ +++  L+I+      +AS +  L
Sbjct: 358  RGTLIVASVLHKMKNAFFFLVQTEDGDLFKVTMDHQDDEIRALRIKYFDTVPVASGLCIL 417

Query: 310  DNAVVYIGSSYGDSQLIKLN------------------------------LQPDAKGSYV 339
             +  +++ S +G   L                                    P    + +
Sbjct: 418  RSGFLFVASEFGPQLLYSFQKLGDDDELPEYISTDYDDYGAGRRRPQLPTFTPRPLDNLM 477

Query: 340  EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 399
            +V E   +L PI+D   ++       Q+    G     S +++R+G+   E  S +L G+
Sbjct: 478  QVDE-VPSLDPILDATPLNPLASDSPQIFAACGRGARSSFKMLRHGLEALEAVSSDLPGV 536

Query: 400  -KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 458
               +W+ + +  D +D+++V+SF++ T +L++   + +EE    G  + + TL       
Sbjct: 537  PSAVWTTKITRRDEYDSYIVLSFVNGTLLLSIG--ETIEEVSDSGLLTSSSTLAVQQLGE 594

Query: 459  NQLVQVTSGSVRLVSSTSRELRNEWKSPP----GYSVNVAT-ANASQVLLATGGGHLVYL 513
            + L+QV    +R +    +++ NEW +P       +  VAT  N  QV++A     LVY 
Sbjct: 595  DALLQVHPHGIRHIL-VDKQI-NEWVTPSLPNGRQTTIVATCTNERQVVVALSSNELVYF 652

Query: 514  EIG-DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 571
            E+  DG L E +  + +   +  + +    E    +   AVG   D +VRI SL   + +
Sbjct: 653  ELDMDGQLNEYQERKAMGAPVLTMSMPECPEGRQRTAYLAVGCG-DSTVRIVSLEPSSTL 711

Query: 572  TKEHLGGEIIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 622
                +     P S +  A             +++   L +G LL  +L+  TG+LTD + 
Sbjct: 712  ASISIQALTAPASSICMAEMHDSTVDRHHATTFVNIGLQNGVLLRTVLDGVTGQLTDTRT 771

Query: 623  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 682
              LG++ + L        T V A S R  + ++   ++ ++ +    + H   F++   P
Sbjct: 772  RFLGSKAVRLVRTRVHGQTAVMALSTRTWLSFTYQSRVQFTPLIFDALDHAWSFSAELCP 831

Query: 683  DSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEE 740
            D L       L I TI  +  KL   S+ L   PRR+  H +    F +    +++ +  
Sbjct: 832  DGLIGIVGSTLRIFTIASLASKLKQDSVALSYTPRRMASHPDGQGLFYVAEADHRTLSPG 891

Query: 741  SEMHFVRLLDDQTFEF-ISTYPLDTFEYGC------SILSCSFS--------------DD 779
            ++   V  LD +          LD  E+G       +  SC                 DD
Sbjct: 892  AQRRRVEALDKELKPHQRGVLDLDPAEFGSIRAEAGNWASCVRVVDGVNAQTTHRIELDD 951

Query: 780  SNVYYCVGTAYVLPEENE--------------P---TKGRILVFIVEDG--KLQLIAEKE 820
            +   + +        + +              P    K  +  + + +G  +L+++ + E
Sbjct: 952  NEAAFSIAVVPFASADKQLFVVVGSAVEVVMSPRSFKKAYLTTYRLGNGGRELEVVHKTE 1011

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDF 879
                   L AF G+LLA + + +++Y+      G ++L  +C +     A+  +  +G  
Sbjct: 1012 VDDVPLVLRAFQGRLLAGVGKVLRIYEL-----GKKKLLRKCENRSFPTAIVALDAQGSR 1066

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-- 937
            IVVGD+ +S+    YK  E  +   A D    +++   +LD D    A+   N++ VR  
Sbjct: 1067 IVVGDMQESVIFASYKPLENRLVTFADDIMPRYVTRCTMLDYDTVAAADKFGNVYVVRID 1126

Query: 938  KNSEGATDEERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIF 988
             ++  + DE+   +        ++G  H    +  +  G ++  L  + +  G    +++
Sbjct: 1127 ADTSRSVDEDVTGMTTMHEKPLLMGAAHKATLLAHYFVGDIITSLSRAVMVPGGREVLLY 1186

Query: 989  GTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
              ++G IG +   +  E    +  L+  LR+    + G +H  +RS          K+ +
Sbjct: 1187 TGISGTIGALVPFVSKEDVDTMTTLEMQLRQQSDSLVGRDHLAYRS-----SYAPVKHVI 1241

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL ESF  L   +   +++ ++    E+ K++ +L
Sbjct: 1242 DGDLCESFGLLPPAKQSAVAQELDRKPSEVNKKLAQL 1278


>gi|302504587|ref|XP_003014252.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
 gi|291177820|gb|EFE33612.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
          Length = 762

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 189/757 (24%), Positives = 326/757 (43%), Gaps = 98/757 (12%)

Query: 2   SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-QG-LQPMLDVPIY 59
           S++ Y +T   PT +T + +G F+  +E  ++ A  +++ +H   P QG +Q +    ++
Sbjct: 6   SMFMYSLTIQPPTAITQAILGQFSGTKEQQIVTAAGSKLTLHRTDPAQGKVQTLFSQDVF 65

Query: 60  GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
           G I +L  FR  G ++D++ I ++  +  ++++   +     R   +   + G R    G
Sbjct: 66  GIIRSLAAFRLAGSSKDYIIIGSDSGRITIVEY-VPAQNRFNRIHLETFGKSGVRRVVPG 124

Query: 119 QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-------LQVLDIKF- 168
           Q   +DP  R  LI     + L  V+  + + +L  +  +           L  LD+ + 
Sbjct: 125 QYLAVDPKGRACLIASVEKNKLVYVLNRNAQAELTISSPLEAHRPQTVVFALTALDVGYE 184

Query: 169 --LYGCAKPTIVVLYQDNKDARHVKT------YEVALKDKDFVEGPWSQNNLDNGADLLI 220
             ++   +     + QD     + +T      YE+ L     V   W+ + +D  A +L 
Sbjct: 185 NPIFAALEVEYTEVDQDPTGQAYEETEKMLVYYELDLGLNHVVRR-WA-DPVDRTASMLF 242

Query: 221 PVPPPL---CGVLIIGEETIVYCSAN--AFKA-IPIR--PSITKAYGRVDADGSR----- 267
            VP       GVL+  E+ IVY  +N  AF+  IP R  P+      R    G       
Sbjct: 243 QVPGGADGPSGVLVCAEDNIVYRHSNQDAFRVPIPRRRGPTENPERKRCITAGVMHKMRG 302

Query: 268 ---YLLGDHAGLLH---LLVITHEKEKVTG----LKIELLGETSIASTISYLDNAVVYIG 317
              +LL    G L    + ++  E EK TG    LK++      +AS++  L +  +++ 
Sbjct: 303 AFFFLLQSEDGDLFKVTMEMVEDENEKATGEVKRLKLKYFDTVPLASSLCILKSGFLFVA 362

Query: 318 SSYGD-----------------------SQLIKLNLQP----DAKGSYVEVLERYVNLGP 350
           S  G+                       S +I   L P          + ++E   +L P
Sbjct: 363 SETGNQHFYQFEKLGDDDDEIEFISDDCSAVISEPLPPVYFRPRPAENLNLVESIASLNP 422

Query: 351 IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
           ++   + ++  +   Q+ T  G     S R +++G+ ++E    EL  +   +W+ + S 
Sbjct: 423 LMAASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKLSR 482

Query: 410 DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
           +D FD ++V+SF + T +L++   + +EE    GF S   TL       + L+QV    +
Sbjct: 483 NDQFDAYIVLSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI 540

Query: 470 RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQ 527
           R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  Q
Sbjct: 541 RHIHADQR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQ 598

Query: 528 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV- 585
           +   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++ 
Sbjct: 599 MSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALS 657

Query: 586 LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
           ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +P+ L + S K  
Sbjct: 658 IMSMIDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQ 717

Query: 641 THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFN 677
             V A S R          L YS+V  K  + + P N
Sbjct: 718 RAVLALSSR--------SWLGYSDVQTKSFT-LTPLN 745


>gi|74190887|dbj|BAE28225.1| unnamed protein product [Mus musculus]
          Length = 937

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 186/837 (22%), Positives = 351/837 (41%), Gaps = 102/837 (12%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
           Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G I 
Sbjct: 4   YNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIR 63

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
           +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ   
Sbjct: 64  SLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQFLA 122

Query: 123 IDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTI 177
           +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   P  
Sbjct: 123 VDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMF 182

Query: 178 VVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP--- 223
             L  D ++A +  T E A   +    F E     N+        L+   + LI VP   
Sbjct: 183 ACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGS 242

Query: 224 --PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR-------------- 267
             P   GVLI  E  I Y   N      IR  I +    +D D  R              
Sbjct: 243 DGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKS 297

Query: 268 ---YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
              +L     G +  + +  +++ VT ++I+      +A+ +  L    +++ S +G+  
Sbjct: 298 MFFFLAQTEQGDIFKITLETDEDMVTEIRIKYFDTVPVAAAMCVLKTGFLFVASEFGNHY 357

Query: 325 LIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VVDL 359
           L ++                          QP    + V +++   +L PI+ FC + DL
Sbjct: 358 LYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIADL 415

Query: 360 ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
             +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +++
Sbjct: 416 ANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYII 475

Query: 419 VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
           VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 476 VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR- 532

Query: 479 LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
             NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 533 -VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMS 591

Query: 537 INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE---- 591
           +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   LC  E    
Sbjct: 592 LANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGT 648

Query: 592 ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                       G  YL   L +G LL  +L+  TG+L+D +   LG++P+ L     + 
Sbjct: 649 EKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQG 708

Query: 640 TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
              V A S R  + YS   +   + ++ + +     F S   P+ +       L I  ++
Sbjct: 709 QEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALE 768

Query: 700 DIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE 755
            +  +  + + PL   PR+     +S    I    + +  E ++    + + ++  E
Sbjct: 769 KLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVE 825


>gi|168031491|ref|XP_001768254.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680432|gb|EDQ66868.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1391

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 220/990 (22%), Positives = 390/990 (39%), Gaps = 192/990 (19%)

Query: 252  PSITKAYGRVDADG-SRYLLGDHAGLLHLLVITHEK-EKVTGLKIELLG-ETSIASTISY 308
            P+IT       A+G SR  L    G +HL  +  E  + V  ++++    + S  + + +
Sbjct: 378  PTITAWSWEPYAEGQSRLALAMDTGEIHLARLIFESPDDVPRIEVQQRQYKCSPCNVVLW 437

Query: 309  LDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVV 368
                ++ +    GD Q+++ +   + K  +  +++   N+ PI+DF + D   + Q Q+ 
Sbjct: 438  TKGGLLAVFVEMGDGQVLQCS--DNGKLIFKSLIQ---NVAPILDFSLADYHNEKQDQMF 492

Query: 369  TCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETR 426
             CSGA  +GSLR++RNGI + +    S   QG+ G +++R    DP+  F V+SF+ ETR
Sbjct: 493  ACSGAGNEGSLRVIRNGISVEKLYTTSPIYQGVTGTYTMRMCCRDPYHAFFVMSFVQETR 552

Query: 427  ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE-------- 478
            +L++ L + ++ TE  GF     TL C       +VQV S  V +   T           
Sbjct: 553  VLSVGL-NFVDITEAVGFQPCASTLACGTIEDYHVVQVCSKEVIVCVPTKTAHPAGIDSP 611

Query: 479  --LRNEWKSPPGYSVNV-ATANASQVLLATGGGHLVYLEIGDGI-----LTEVKHAQLEY 530
                + WK P G  V++ A A+ + VL  +  G +V L    G      L   +  +L+ 
Sbjct: 612  LPFCSSWKPPQGLVVSLGAVASKAIVLALSKPGLIVMLGSQRGANGALELCMTQQCELKA 671

Query: 531  EISCLDI---------------------NPIGENPS---YSQIAAVGMWTDISVRIFSL- 565
            E+SC+ I                      P   NPS     +I  VG   + SV + S+ 
Sbjct: 672  ELSCISIPDEEDWTSSPLPPSIVGLVEGTPKSRNPSGVEVGRICVVGT-HEPSVEVLSIV 730

Query: 566  --PDLNLITKEHLG---------GEIIPRSVLLCAFEGISYLLCALGDGHLLNF------ 608
                L  +   H+             +P SV L  F+ + Y+L  L +G LL +      
Sbjct: 731  PGEGLAPLAVGHISLVSCVGTTLSGCVPESVRLAQFDRL-YILAGLRNGMLLRYEWPASS 789

Query: 609  ---------LLNMKTGE---------------LTDRKKV--------SLGTQPITLRTFS 636
                     LL+    E               L D   V         +G  P++L +  
Sbjct: 790  TATLPDCTNLLSTSDWENIGITQPNLGGDKDVLEDSSPVLLHLVAVRRMGVSPVSLISLQ 849

Query: 637  SKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
            +  +  V A SDRP ++ ++  ++++ +++++    SH  P NS   P+ +    +  L 
Sbjct: 850  ASLSADVIALSDRPWLLQTARHSQRIAHTSISFPSSSHAAPVNSVDCPNGILFVADCSLH 909

Query: 695  IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF 754
            +  ++ +++L+++ +PLG  PRR+ +  +S+T  +  ++     +   +  V  +D  + 
Sbjct: 910  LVEMEHLKRLNVQKLPLGRTPRRVLYHTESKTLIV--MRTDYGPDGGLVSDVCCVDPLSG 967

Query: 755  EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY------VLPEENEPTKGRILVFIV 808
               S Y LD  E   SI    +         VGT+       +   E E  KGR+LVF +
Sbjct: 968  ANYSCYTLDAGEVARSIQ--LWKRRQEQLLLVGTSLIGGGGIMSSGEAESAKGRLLVFQL 1025

Query: 809  ------------------------------------------------EDGKLQLIAEKE 820
                                                            E  +L+L     
Sbjct: 1026 LSKHVGTHSQPVMSSTNTPTLSNQSTPGSSAADPMVLSESDESDLTDGEGWELRLKTHII 1085

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 880
              GAV S++++ G+ + A      L+    R D  + L+         +   +      I
Sbjct: 1086 LPGAVLSVSSYLGQYVLASAGNC-LFCLGFRPDSPQRLRRMAMVKTRFMITSLSVHLSRI 1144

Query: 881  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD--IYLGAENNFNLFTVRK 938
             VGD    I    Y+   G +E          ++   ++D D  +      NF  F+   
Sbjct: 1145 AVGDCRDGILFYTYQEVSGQLELLYCGGIQQLVADCVLMDTDTAVVTDRRGNFCTFSSAS 1204

Query: 939  NSEG--------ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP---------DSDVG 981
              EG        +   ER  L +   YH+GE + R    S     P          +D  
Sbjct: 1205 TPEGDLNFFFAESVSPER-NLSLGCWYHIGETLMRIHKASFAYESPAEESMKNCGSNDAI 1263

Query: 982  QIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR--KVIKGVGGLNHEQWRSFNN 1036
              PT   V+  ++ G + +   +  E+Y  L+ +Q+ L    +   + G NHE +R    
Sbjct: 1264 AHPTHSSVVASSLLGSVFIFIKVTREEYDLLKAVQSRLAHYPITTPLLGNNHEDYR---G 1320

Query: 1037 EKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
            +         LDGD++  FL+L+  + + +
Sbjct: 1321 QGCPAGVCQVLDGDMLCQFLELTSAQQENV 1350


>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
          Length = 1217

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 181/827 (21%), Positives = 344/827 (41%), Gaps = 98/827 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
            I +L  FR  G  +D++ + ++  +  +L++ A  +               R    GQ 
Sbjct: 61  IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIAAKNTFEKVHQETFGKSGCRRIVPGQY 120

Query: 121 GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKP 175
             IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   P
Sbjct: 121 LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP 180

Query: 176 TIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP 223
               L  D ++A    T + A+K +            + V   +S+  L+  A+ L+ VP
Sbjct: 181 MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEP-LEEHANFLVSVP 239

Query: 224 -----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR----------- 267
                P   GVLI  E  + Y   N      IR  I +    +D D  R           
Sbjct: 240 GGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATHK 294

Query: 268 ------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
                 +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +G
Sbjct: 295 TKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFG 354

Query: 322 DSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVD 358
           +  L ++             +  P  +G       R +          +L PI+   V D
Sbjct: 355 NHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVAD 414

Query: 359 LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFL 417
           L  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ +D ++
Sbjct: 415 LANEDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYI 474

Query: 418 VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 477
           +VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R
Sbjct: 475 IVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR 532

Query: 478 ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCL 535
              NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C+
Sbjct: 533 --VNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCM 590

Query: 536 DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS 594
            +  +      S   AVG+  D +VRI SL   + +    +  + +P +   LC  E  +
Sbjct: 591 ALGNVAVGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGA 647

Query: 595 ----------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
                           YL   L +G LL  +L+  +G+L D +   LG++P+ L     +
Sbjct: 648 KEADNSEDAAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQ 707

Query: 639 NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
               V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  +
Sbjct: 708 GNQAVLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILAL 767

Query: 699 DDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
           + +  +  + S PL   PR+      S    +   ++ +  EE++  
Sbjct: 768 EKLGAVFNQVSFPLEYTPRKFAIHADSAHLVVIETEHNAYTEETKQQ 814



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 41/276 (14%)

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKS 888
            + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D+ +S
Sbjct: 955  YQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAVVSINAIGQRIYVSDVQES 1008

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE-- 946
            +  + YK +E  +   A D +  W++   +LD D    A+   N+  +R  + G  D+  
Sbjct: 1009 VYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRL-ATGINDDVD 1067

Query: 947  ----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
                      +RG L       + V  +H+GE V   +  +L+        G   ++++ 
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSESLVYT 1120

Query: 990  TVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            T++G +GV+     HE + F + L+ ++R     + G +H  +RS+         KN +D
Sbjct: 1121 TLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YYPVKNVID 1175

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL E F  +  T+   IS  +  +  E+ K++E++
Sbjct: 1176 GDLCEQFNSIEPTKQKSISGDLERTPSEVSKKLEDI 1211


>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
          Length = 1217

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 182/828 (21%), Positives = 347/828 (41%), Gaps = 100/828 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +L  FR  G  +D++ + ++  +  +L++   +  +  +   +   + G R    GQ
Sbjct: 61  IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEY-IPAKNIFEKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAK 174
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120 YLAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPV 222
           P    L  D ++A    T + A+K +            + V   +S+  L+  A+ L+ V
Sbjct: 180 PMFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEP-LEEHANFLVSV 238

Query: 223 P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
           P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239 PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATH 293

Query: 268 -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                  +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +
Sbjct: 294 KTKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEF 353

Query: 321 GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
           G+  L ++             +  P  +G       R +          +L PI+   V 
Sbjct: 354 GNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVA 413

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
           DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ +D +
Sbjct: 414 DLANEDTPQLYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAY 473

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
           ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  
Sbjct: 474 IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK 531

Query: 477 RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
           R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C
Sbjct: 532 R--VNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMC 589

Query: 535 LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-- 591
           + +  +      S   AVG+  D +VRI SL   + +    +  + +P +   LC  E  
Sbjct: 590 MALGNVAIGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMG 646

Query: 592 --------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
                            YL   L +G LL  +L+  +G+L D +   LG++P+ L     
Sbjct: 647 AKDANNSEELSSQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKM 706

Query: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
           +    V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  
Sbjct: 707 QGNQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILA 766

Query: 698 IDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
           ++ +  +  + S PL   PR+      S    I   ++ +  EE++  
Sbjct: 767 LEKLGAVFNQISFPLEYTPRKFAIHSDSAHLIIIETEHNAYTEETKQQ 814



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 41/294 (13%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 870
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAI 990

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 931  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 971
             N+  +R  S G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRLAS-GINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 972  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +RS+         KN +DGDL E F  +   +   I+  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPVKNVIDGDLCEQFNSIEPAKQKSIAGDLERTPSEVSKKLEDI 1211


>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
          Length = 1256

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 176/790 (22%), Positives = 326/790 (41%), Gaps = 95/790 (12%)

Query: 16  VTHSCVGNFTSPQELN-LIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIATLELFRPHG 72
           +  S  GNF+  ++   +++A+ + +E+  + P    L  +L  P +  + +L  FR   
Sbjct: 14  INASAYGNFSGTKKTEEIMVARGSMLELLRIDPDTDKLVSILQQPAFCVVRSLIAFRLTS 73

Query: 73  EAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGL 132
             +D+  + T+  K  +L++  E+SEL    M        R    GQ    DP  R I +
Sbjct: 74  THKDYCVVGTDAGKVTILEYLPETSELKAVHMETFGKTGCRRIVPGQYLAADPQGRAIMI 133

Query: 133 HLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-----YGCAKPTIVVLYQDNKDA 187
              +    V   +     + A +  LE  +   I F       G   P   V+  D  +A
Sbjct: 134 SAVEKQKLVYVLNRDTASRLAISSPLEAHKSHAIIFHTCGVDVGFDNPIFAVIELDYSEA 193

Query: 188 RHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP---PPLCGVLII 232
               T E A   +            + V   WS + +  GA LL+PVP       GVL+ 
Sbjct: 194 DQDSTGEEAANTEKQLVYYQLDLGLNHVTRLWS-DPISRGASLLLPVPGGEAGPSGVLVC 252

Query: 233 GEETIVYCSAN---AFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLL-HL--------- 279
           GE  + Y   +       +P R ++    G +   G+   L    GL  HL         
Sbjct: 253 GENWVAYKHQDHPEVRAPLPRRKTMPTGRGLLVTSGT---LHQQPGLFFHLIQSELGDLY 309

Query: 280 ---LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKG 336
              LV+  E+ +VT + IE+     +A+++       ++  S + +  +   +     +G
Sbjct: 310 KVSLVVNDEQTEVTDISIEVFDTIPVANSLQITKKGKLFCASEFSNHMMFHFHKMGGEEG 369

Query: 337 SYVEV--------------------------------LERYVNLGPIVDFCVVDLERQGQ 364
           + V                                  L+   +L P+ D  V DL R+  
Sbjct: 370 AVVATQCADPELDDSSESAAQVAPTFTPSATLKNLWGLDEVESLAPLTDMLVGDLAREDT 429

Query: 365 GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFIS 423
            Q+ T  G     +LRI+R+G+ + E A  +L G+   +++ +    D +D ++V+SF +
Sbjct: 430 PQMYTLCGRGNRSTLRILRHGLAVTELAENDLPGVPSAVFAFKERLTDDYDRYIVLSFTN 489

Query: 424 ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
            T +L   ++D +EE E  GF + + TL       N+++QV S  +R++     +   EW
Sbjct: 490 ATMVL--EVQDSVEEVENSGFLATSSTLDVKLMANNKILQVYSHGLRVI--MKGQPPQEW 545

Query: 484 KSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI--LTEVKHAQL-EYEISCLDINPI 540
           ++P    +  A AN  QV+LA  GG +++ E+ + +  + EV   QL   EI+CL++  +
Sbjct: 546 RAPGKKQIEKACANERQVVLALAGGEIIFFELDEAMQNIQEVGTKQLGGVEIACLEMGEV 605

Query: 541 GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS------ 594
            ++   +   AVG W   +V+I  L   NL+ +  +     P   L  A           
Sbjct: 606 PKDRVRAPFLAVGDWNG-NVKILGLSPENLLEQVAMINLPHPAESLCLAHMAAEQAAGGS 664

Query: 595 ----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 650
               +L   L  G      ++   G L+D ++  LG++P+ L     ++   V A S R 
Sbjct: 665 NEQLFLYIGLASGVCQRVAVDATAGTLSDPRQRFLGSKPVKLFRIQVQDKRGVLALSSRS 724

Query: 651 TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSI 709
            + Y+   +   + ++   +     F++   P+ +      +L I  ++ + +  +  ++
Sbjct: 725 WLSYNYQGRYQMTPLSYDPLDFAAEFSTEMCPEGVVAVSGEKLRIFGVERLGEVFNQAAL 784

Query: 710 PLGEHPRRIC 719
           PL   PR+I 
Sbjct: 785 PLKYTPRQIA 794



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 158/359 (44%), Gaps = 38/359 (10%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRIL 804
            +RLLD      +    LD  E   S+   +F + +   +  VGTA  L       +G  +
Sbjct: 909  IRLLDPVEGTTVECLDLDDNEAALSVAPVAFHNRNGEAFVAVGTAKSLTFHPRGHEGCFV 968

Query: 805  -VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC- 862
             V+ + + +L L+ + E      ++  F G+LL  + Q +++Y     D G ++L  +C 
Sbjct: 969  HVYRILENRLVLLHKTEVPDVPLAMKEFQGRLLVGVGQSLRMY-----DLGRKKLLRKCE 1023

Query: 863  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 922
                  + + +   GD +  GD M+S     Y+  E  + E A D    +M+   +LD D
Sbjct: 1024 NKRMPSMVVSLTVTGDRVFAGDQMESCHCFKYRRAENRLVEFADDQVPRFMTKTCLLDYD 1083

Query: 923  IYLGAENNFNLFTVRKNSEGATDEER-----------------GRLEVVGEYHLGEFVNR 965
               GA+   N+F +R   + + D +                   +++   ++H+GE V+ 
Sbjct: 1084 SIAGADKFGNIFVLRVPLDVSDDVDNPTGNRLLWDSGHLSGAPNKVQQQLQFHVGEVVSS 1143

Query: 966  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVG 1024
             R  +LV        G    +++ T+NG IG +        + F   ++  +R+    + 
Sbjct: 1144 LRRTTLV-------PGGAEVLLYSTINGSIGALLPFKSRDDVDFFTHMEMYMRQEKPTLC 1196

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
            G +H  +RS+      + AK+ +DGDL E F  L   +   ++  ++ +V E+ K++E+
Sbjct: 1197 GRDHISYRSY-----YLPAKDVIDGDLCEQFSSLPFEKQKLVANGLDRTVGEVVKKLED 1250


>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
          Length = 1217

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 182/835 (21%), Positives = 351/835 (42%), Gaps = 100/835 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +L  FR  G  +D++ + ++  +  +L++   +  +  +   +   + G R    GQ
Sbjct: 61  IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEY-ISAKNIFEKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAK 174
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120 YLAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPV 222
           P    L  D ++A    T + A+K +            + V   +S+  L+  A+ L+ V
Sbjct: 180 PMFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEP-LEEHANFLVSV 238

Query: 223 P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
           P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239 PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATH 293

Query: 268 -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                  +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +
Sbjct: 294 KTKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEF 353

Query: 321 GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
           G+  L ++             +  P  +G       R +          +L PI+   V 
Sbjct: 354 GNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVA 413

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
           DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ +D +
Sbjct: 414 DLANEDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAY 473

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
           ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  
Sbjct: 474 IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK 531

Query: 477 RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISC 534
           R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C
Sbjct: 532 R--VNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMC 589

Query: 535 LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGI 593
           + +  +      S   AVG+  D +VRI SL   + +    +  + +P +   LC  E  
Sbjct: 590 MALGNVAVGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMG 646

Query: 594 S----------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
           +                YL   L +G LL  +L+  +G+L D +   LG++P+ L     
Sbjct: 647 AKDADNSEDAAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRM 706

Query: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
           +    V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  
Sbjct: 707 QGNQAVLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILA 766

Query: 698 IDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDD 751
           ++ +  +  + S PL   PR+      S    +   ++ +  EE++    + + D
Sbjct: 767 LEKLGAVFNQVSFPLEYTPRKFAIHTDSAHLVVIETEHNAYTEETKQQRRQQMAD 821



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 41/276 (14%)

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKS 888
            + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D+ +S
Sbjct: 955  YQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAVVSINAIGQRIYVSDVQES 1008

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE-- 946
            +  + YK +E  +   A D +  W++   +LD D    A+   N+  +R  + G  D+  
Sbjct: 1009 VYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRL-ATGINDDVD 1067

Query: 947  ----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
                      +RG L       + V  +H+GE V   +  +L+        G   ++++ 
Sbjct: 1068 EDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSESLVYT 1120

Query: 990  TVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            T++G +GV+     HE + F + L+ ++R     + G +H  +RS+         KN +D
Sbjct: 1121 TLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YYPVKNVID 1175

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL E F  +  T+   IS  +  +  E+ K++E++
Sbjct: 1176 GDLCEQFNSIEPTKQKSISGDLERTPSEVSKKLEDI 1211


>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
          Length = 1235

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 268/1222 (21%), Positives = 472/1222 (38%), Gaps = 176/1222 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT--PQGLQPMLDVPIYGRIA 63
            Y +T  +PT    +  G+F    +  ++ A  +R+ I  ++   +G Q +    ++G I 
Sbjct: 4    YALTVKQPTATQDAISGDFLGNGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFGIIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             +  FR  G  +D + I T+  +    ++  +     T           R    G+    
Sbjct: 64   RIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEHTFKTLHFETFGKSGIRRVVPGEYLAA 123

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCAKP--- 175
            DP  R I +   +    V      GQ   A +  LE  +   + +       G   P   
Sbjct: 124  DPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNPMFA 183

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKDFVE---------GPWSQNNLDNGADLLIPVP--- 223
            T+ V Y +++     + YE   K+  + E           WS+  +D  A+ L  VP   
Sbjct: 184  TLEVDYSNSETDPTGEAYEEIKKELVYYELDLGLNHIVRKWSEP-VDRTANTLFRVPGGP 242

Query: 224  PPLCGVLIIGEETIVY------CSANAFKAIPIRPSITKAYGR-----------VDADGS 266
                GVL  GE++I Y       S+    AIP R   T+   R           +     
Sbjct: 243  SAPSGVLCCGEDSITYRRIFNNKSSVRRLAIPRREGATEDPNRKRMIVAGTLYSLKGGDF 302

Query: 267  RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             YLL    G +  L +      V  +KI+      + ++I  L    VY     GD  L 
Sbjct: 303  FYLLQTEDGDVFKLTVDAPNGTVENIKIKYFDTIPVTTSICILRAGFVYAACESGDRILY 362

Query: 327  KL---------------NLQPDAKGSY------------VEVLERYVNLGPIVDFCVVDL 359
            +L                   D + S+            +  +E   +L PI+D  V + 
Sbjct: 363  ELESLGDETDDPVFESSQFPVDPEASFAPPFFRPRALVNLTAVEAMPSLNPIMDMEVANP 422

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLV 418
              +   Q+ T +G     S R  RN + + +     L Q    +W+ + +++D  DT +V
Sbjct: 423  ALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDETDTLIV 482

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV------ 472
            +     +R L + + D++EE    GF   T TL       + ++Q+    +R +      
Sbjct: 483  LCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQFP 540

Query: 473  ---SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA-Q 527
               +S +     +W+ P   ++     N  QV +A   G ++Y E   DG L   +    
Sbjct: 541  NDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEIV 600

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDL--NLITKEHLGGEIIPRS 584
            LE  I+CL +  + E    +   AVG  +D +VRI++L PD+  N++    +     P S
Sbjct: 601  LESTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIYNLSPDMEGNILRSISVQALTSPPS 659

Query: 585  VLLC------AFEGIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
             L        +  G S +L   L  G  +  +L+  TG++ D ++  LG +PI     + 
Sbjct: 660  DLTINLMTDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTV 719

Query: 638  KNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
                 + A + RP + Y+  +   L  + +N         F+ + F   + ++   EL I
Sbjct: 720  AGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNFDGSQFKGIICVSAN-ELRI 778

Query: 696  GTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKN------------QSCAEES 741
             T +D+       SIPL   PR++  + +Q   + I S  N            QSC ++ 
Sbjct: 779  FTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNNTISADRRQQLIAQSCGKKE 838

Query: 742  EMHFVRLLDDQTFEFIST--YPLDTFEY------------------------------GC 769
            +     +  +Q+     +  +P   F Y                                
Sbjct: 839  DGTNGSMETEQSNGAADSDEFPAVDFGYPRAQGSWASCIQVVDPVTEKTVTHTVELNGNI 898

Query: 770  SILSCSF----SDDSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETK 822
            S++S +     S +   +  VGTA  L   P +      +I        +L+   E    
Sbjct: 899  SLVSAALVFFESRNDEAFLAVGTAKDLSFTPYKFSSASIQIYKINPTGRELEFFHETTVS 958

Query: 823  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 882
                +L AF GKLLA + + + LY   ++    R+ Q+       I  L  +T+G  +VV
Sbjct: 959  DPPLALLAFKGKLLAGVGRHLCLYDCGMK-SVLRKAQAPNCVPTRITGL--KTQGSRLVV 1015

Query: 883  GDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--- 937
             D  +S++ +++K +     +     D  A   +A E+LD D  +G +   N++ VR   
Sbjct: 1016 SDQAQSVTYVVHKDQVHPNRLIPFVDDTIARHTTASEMLDYDTTVGGDKFGNIWLVRCPQ 1075

Query: 938  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQIPTV 986
            K SE + +   G   +V + +LG   NR     L+     +D+           G    V
Sbjct: 1076 KVSESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYFTNDIPVSIQKTVLLSGGERVV 1132

Query: 987  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
             +  + G +G +        +   ++L+  LR   K + G +H  +RS+    K+V    
Sbjct: 1133 FWAGLQGTLGALIPFNSRRSHKMFQQLELQLRSDDKPLSGRDHLAFRSYFAPVKSV---- 1188

Query: 1046 FLDGDLIESFLDLSRTRMDEIS 1067
             +DGDLIE FL L R + + I+
Sbjct: 1189 -IDGDLIERFLVLPRDKRESIA 1209


>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
 gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
          Length = 1217

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 180/826 (21%), Positives = 346/826 (41%), Gaps = 96/826 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +L  FR  G  +D++ + ++  +  +L++   +  +  +   +   + G R    GQ
Sbjct: 61  IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEY-IPAKNVFEKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAK 174
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120 YLAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPV 222
           P    L  D ++A +  T + A+K +            + V   +S+  L+  A+ L+ V
Sbjct: 180 PMFACLEIDYEEADNDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEP-LEEHANFLVSV 238

Query: 223 P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
           P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239 PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATH 293

Query: 268 -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                  +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +
Sbjct: 294 KTKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEF 353

Query: 321 GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
           G+  L ++             +  P  +G       R +          +L PI+   V 
Sbjct: 354 GNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVA 413

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
           DL  +   ++    G     +LR++R+G+ ++E A  EL G    +W+++   D+ +D +
Sbjct: 414 DLANEDTPELYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAY 473

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
           ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  
Sbjct: 474 IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK 531

Query: 477 RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
           R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C
Sbjct: 532 R--VNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMC 589

Query: 535 LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE---------------HLGGE 579
           + +  +      S   AVG+  D +VRI SL   + +                   +G +
Sbjct: 590 MALGNVAVGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAK 648

Query: 580 IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
               S  L   +   YL   L +G LL  +L+  +G+L D +   LG++P+ L     + 
Sbjct: 649 DANNSEDLSPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQG 708

Query: 640 TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
              V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  ++
Sbjct: 709 NQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALE 768

Query: 700 DIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
            +  +  + S PL   PR+      S    I   ++ +  EE++  
Sbjct: 769 KLGAVFNQISFPLEYTPRKFAIHTDSAHLIIIETEHNAYTEETKQQ 814



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 135/294 (45%), Gaps = 41/294 (13%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 870
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAV 990

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 931  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 971
             N+  +R  S G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRLAS-GINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 972  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +RS+         KN +DGDL E F  +  T+   IS  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPVKNVIDGDLCEQFNSIEPTKQKSISGDLERTASEVSKKLEDI 1211


>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1213

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 178/764 (23%), Positives = 323/764 (42%), Gaps = 77/764 (10%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIYGRI 62
           Y +T  K   +  +  GNF++P+   ++ ++   +E  LL P     +Q ++   ++G +
Sbjct: 4   YNLTLQKGGGIQCAVYGNFSAPKAQEIVASRNKVLE--LLRPDDAGKMQTIVSTEVFGVV 61

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            +L  FR  G  +D++ + ++  +  VL +D E S  +            R    GQ   
Sbjct: 62  RSLSAFRLTGANRDYVVVGSDSGRIVVLSFDKEKSAFVKVHQETFGKSGCRRIVPGQFLA 121

Query: 123 IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY---GCAKPTI 177
           +DP  R  +IG      +  V+  D    L  +  +   +  V+         G   P  
Sbjct: 122 VDPKGRAVMIGAIEKSKIVYVLNRDTSANLTISSPLEANKSHVITFAVCALDCGLDNPQF 181

Query: 178 VVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPP 224
             +  D  DA             +H+  YE+ L     V   WS+  +DNGA+ LI VP 
Sbjct: 182 AAVELDYGDADQDPTGEAAAEAQKHLVFYELDLGLNHVVR-KWSEA-IDNGANHLIAVPG 239

Query: 225 PLCG---VLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSR--------YLL 270
              G    L+  E  I+Y +   A+    IP R S++   G +    +         +L 
Sbjct: 240 GGDGPGGCLVCAENFIIYKNEGHADVRAVIPRRSSLSGDRGVLIVSSATHRTKQQFFFLA 299

Query: 271 GDHAGLLHLLVI--THEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
               G ++ + +  T   E V+ +KI+        +++  L    ++  S + +  L + 
Sbjct: 300 QSEYGDVYKVTVEWTPGSETVSEVKIKYFDTIPPCASLCVLKTGFLFAASEFSNHALYQF 359

Query: 329 N-------LQPDAKGSYVEVLERYV-------------------NLGPIVDFCVVDLERQ 362
                       +  + VE  E Y                    +L P++D    +L  +
Sbjct: 360 QGIGDDDDDVESSSATLVETDEGYQPVFFEPRALRNLHPIDEIESLCPVLDAQCHNLTSE 419

Query: 363 GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
              QV    GA    +LR++R G+ ++E A   L G    +++++ +  D FD ++VVSF
Sbjct: 420 ETPQVYALCGAGSRSTLRVLRQGVALSEMAVSPLPGNPNAVFTVKKNIADEFDAYIVVSF 479

Query: 422 ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
           ++ T +L++   + +EE    GF   T TL       + L+Q   G +R V +  R   N
Sbjct: 480 VNATLVLSIG--ETVEEVSDSGFLGTTPTLSASLLGDDSLLQAHPGGLRHVRADKR--IN 535

Query: 482 EWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPI 540
           EW+ P   ++     N  QV++A  GG ++Y E+   G L E++  +   +++CL + P+
Sbjct: 536 EWRCPGRKTITRVACNNRQVVIALSGGEIIYFELDSTGQLMEIEKLETNGDVACLHVGPV 595

Query: 541 GENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL-LCAFEGISYLLC 598
            E    ++  AVG + D +VR+ SL  D  L T         P S+L L   EG  YL  
Sbjct: 596 PEGSLRNRFLAVGSF-DSTVRVLSLSADDCLQTMGVQALAAAPCSLLMLQTREGGLYLNV 654

Query: 599 ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS-N 657
            L +G LL   ++  TG+L+D +   LG +P  L   + +    + A S RP + +    
Sbjct: 655 GLANGVLLRAEVDRVTGQLSDTRARFLGARPPKLHGATVRGQPAMLALSSRPWLGHVDLQ 714

Query: 658 KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 701
           ++   + ++ + + H   F S   P+ +       L I +++ +
Sbjct: 715 RRFALAPLSYEALEHAADFTSDQCPEGVVAVAGSTLRIVSVERL 758



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 43/332 (12%)

Query: 776  FSDDSNVYYCVGTAYVLPEENEPTKGRI--LVFIVEDGKLQLIAEKETKGAVYSLNAFNG 833
            F   + V+  VGTA  L        G    L   +EDG + L+ +    G   ++  F G
Sbjct: 897  FPVANEVFLAVGTAVGLTFAPRDCDGGFVHLYRYLEDGTVTLVHKTPLDGVPGAMCGFKG 956

Query: 834  KLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 889
            +LL      ++LY    K +LR    R   +            V   GD I VGD+ +S 
Sbjct: 957  RLLLGCGNALRLYDFGKKKLLRKVENRNFPN--------FITTVHASGDRIYVGDVQESF 1008

Query: 890  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------------ 937
              + YK E+ ++   A D     ++A   LD D   GA+   N+F  R            
Sbjct: 1009 HFVKYKREDLSLIIVADDVQPRHITAALPLDYDTMAGADKFGNVFVARLAQDVSADIEED 1068

Query: 938  ----KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 993
                K S G  +    ++E V ++H+GE V     G+L         G +  +++ T+ G
Sbjct: 1069 PTGGKASGGTLNGAPRKVEHVAQFHVGETVCALTKGTL-------QAGGLECMLYATLMG 1121

Query: 994  VIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 1052
             +G +        + F   L+ ++R+    + G +H  +RS          K+ +DGDL 
Sbjct: 1122 TVGALMPFTSRADVDFATHLEMHVRQENPPLLGRDHMAYRS-----AYFPVKDVVDGDLC 1176

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            E ++ L       I++ M+ +  E+ K++E+L
Sbjct: 1177 EQYVTLPAETQRAIAEEMDRTPAEVMKKLEDL 1208


>gi|428180132|gb|EKX49000.1| hypothetical protein GUITHDRAFT_105085 [Guillardia theta CCMP2712]
          Length = 1207

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 266/1240 (21%), Positives = 501/1240 (40%), Gaps = 195/1240 (15%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
            Y +T  +P+ +T +  GNFT      +++A    IE+  +  QG +  + ++  +  +  
Sbjct: 4    YSLTLQRPSAITFAVRGNFTGCGNHEIVVAHGRAIELLQVDEQGRILSLCNMECFAIVRA 63

Query: 65   LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ----- 119
            +   R  G  +D +F+ ++  K  +++++   ++     +        R    GQ     
Sbjct: 64   MAASRLPGYDKDCVFLTSDSGKLAIIEYNHVMNQFERVYLETYGKSGCRRMVPGQHLAAD 123

Query: 120  -------IGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC 172
                   IG ++ +     + L D    V+P   K    +   + +  L   D +     
Sbjct: 124  MYGRALVIGSLEKNLIGFQVQLDDANQVVLPPPIKSSSPQRVFVHITSL---DRREELPP 180

Query: 173  AKPTIVVLYQDNKD---------ARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPV- 222
               +I V Y DN +         +R V  YEV + +   +E  ++ + +DN ++LLIPV 
Sbjct: 181  MFASIEVDYVDNPNDEFQDPVVSSRRVCLYEVDMANNS-LEVRYN-DFIDNSSNLLIPVY 238

Query: 223  --PPPLCGVLIIGEETIVYCSANAFKAIPIRPS----------ITKAY--GRVDADGSRY 268
                 L GVLI  E  I   S +A + + + P           I  +Y    +  D S +
Sbjct: 239  NHLSGLFGVLICAENKIALKSPDAEEIVLLIPRRSMLPLEQSVIITSYVLMGIQDDLSIF 298

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            +  +  G L+ + ++    +   L IE L    +A ++  + +  + + S +G+  L   
Sbjct: 299  IAQNDIGDLYKITVSLRCTQDHVLGIEYLDTVPVAQSMIIVRDQYLLLCSEFGNHILFSF 358

Query: 329  N---------------LQPDAKG-----------SYVEVLERYVNLGPIVDFCVVDLERQ 362
            +               +Q D +             Y  V+E   +L PIV   V+DL  +
Sbjct: 359  SASEVGQVTSTIGLTSVQFDDENIDIPNFLPHNLQYFRVVEEIESLSPIVGMKVMDLYSE 418

Query: 363  GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSF 421
            G  QV T  G     S+R++R+G+ + E A  +L  +   +W+L++++ DP D ++VVS 
Sbjct: 419  GNFQVFTLCGKGPRSSIRVLRHGLSVVEMAISQLPTVPVAVWTLKANSTDPHDRYIVVSL 478

Query: 422  I-SETRILAMNLEDELEETEIEGFCSQTQTLF------CHDAIYNQLVQVTSGSVRLVSS 474
              S  + L +++ + +E     G     +++       C   ++   +QV  G   + S 
Sbjct: 479  AHSSVQTLVLSIGETVEAVANHGLLPHAKSISIATMGDCMIQVHTNGIQVMKGGKNIPSP 538

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLE-YEI 532
             +        +P   SVN    N  Q+L+    G   YLE+ G G L E     +   E+
Sbjct: 539  FAS------SNPVILSVN----NEQQMLVTQTDGVTSYLEMEGTGTLREKGKININAQEV 588

Query: 533  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII----PRSV-LL 587
              +++ P+  + +  + A +G + D +     +  L+  +   + G  +    P S+ LL
Sbjct: 589  CAVEVTPLSASQTLGKFAIMGAFMD-NAWFLCVVSLDASSFSSVVGRQVLQARPSSIALL 647

Query: 588  CAF--------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKV-SLGTQPITLRTFSSK 638
             ++          + +L   L +G L+    N +TGE++   +  SLG+ P+ L     +
Sbjct: 648  QSYSRSSREPGRSVFFLYVGLENGVLMRMSFNAETGEISQEFRTRSLGSNPVKLVRVKVQ 707

Query: 639  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
                + A S R  + Y    K     ++   +     F+S   P+      +G L I ++
Sbjct: 708  EKEALLALSSRSWLAYHHQGKQCLDPLSYDMLDFAWNFSSQQCPEGFVCISQGSLRILSL 767

Query: 699  DDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN---------QSCAEESEMHFVRLL 749
            + + ++  ++     H  R C   +  T  +    +         Q  A + +M      
Sbjct: 768  ERVGEIFSQATAKLAHTPRQCAPIKGTTMMMVIESDHNTDANKALQDGANKVDMEGQDGE 827

Query: 750  DDQ-TFEFISTYPLDTFEYGC-----------SILS---CSFSDD-SNVYYC-------- 785
             D+ ++E    + +     GC           S++S    ++SDD + +  C        
Sbjct: 828  ADKLSYEM---FGVQRAGNGCWASSLRVIDMDSLVSRQIINYSDDEAALSLCSSVGANGE 884

Query: 786  ----VGTAYVLPE-ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 840
                VGT+  L   E   + G +  + V    L L  +    G   ++  + G++L  + 
Sbjct: 885  HLVLVGTSVGLRMGEKHASSGFVYTYSVSGSHLHLEHKTPMDGIPRAICNYQGRVLVGVG 944

Query: 841  QKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
              +++Y    K +LR   +R+  +        L   + T+GD I VGD  +S SLL +  
Sbjct: 945  SALRMYEIGKKKLLRKCESRKFPN--------LICSIHTQGDRIFVGDSAESFSLLRFNS 996

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-----------KNSEGATD 945
               + E  A D  A W++A   LD D   GA+   NLF  R           +     TD
Sbjct: 997  LSNSFELFAEDARARWLTASCPLDFDTVAGADKFGNLFICRIPEEAASELEEEGEAVQTD 1056

Query: 946  E--ERG---RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1000
                RG   +L+ V   ++GE V   +  +LV        G    VI+GT+ G +G +  
Sbjct: 1057 SVLHRGAKHKLDEVAHQYVGEAVLGLQRSALVQ-------GGTEAVIYGTILGGLGALQP 1109

Query: 1001 -LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN-----------EKKTVDAKNFLD 1048
             +  E   F  +L+  LR  +     +N    +SF+N                  +  +D
Sbjct: 1110 FVSKEDVDFFLRLEMLLRGNLGVRESVND---KSFDNPSLCGNDQLGFRSYFAPMRGVVD 1166

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL-TRL 1087
            GDL E+F  L   R  +++  +  + EE+ K++E++ TRL
Sbjct: 1167 GDLCETFHTLDSGRQHKVAAELGKTPEEVAKKIEDMRTRL 1206


>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
          Length = 1217

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 180/828 (21%), Positives = 348/828 (42%), Gaps = 100/828 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            + +L  FR  G  +D++ + ++  +  +L++   +  +  +   +   + G R    GQ
Sbjct: 61  IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEY-IPAKNIFEKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAK 174
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120 YLAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPV 222
           P    L  D ++A    T + A+K +            + V   +S+  L+  A+ L+ V
Sbjct: 180 PMFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEP-LEEHANFLVSV 238

Query: 223 P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
           P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239 PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATH 293

Query: 268 -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                  +L     G +  + +  + + VT +K++      +A+++  L    +++ S +
Sbjct: 294 KTKSMFFFLAQTEQGDIFKITLETDDDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEF 353

Query: 321 GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
           G+  L ++             +  P  +G       R +          +L PI+   V 
Sbjct: 354 GNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVA 413

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
           DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ +D +
Sbjct: 414 DLANEDTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAY 473

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
           ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  
Sbjct: 474 IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK 531

Query: 477 RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
           R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C
Sbjct: 532 R--VNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMC 589

Query: 535 LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-G 592
           + +  +      S   AVG+  D +VRI SL   + +    +  + +P +   LC  E G
Sbjct: 590 MALGNVAVGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMG 646

Query: 593 IS---------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
           +                YL   L +G LL  +L+  +G+L D +   LG++P+ L     
Sbjct: 647 VKDADNSEDSAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRM 706

Query: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 697
           +    V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  
Sbjct: 707 QGNQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILA 766

Query: 698 IDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
           ++ +  +  + S PL   PR+      S    +   ++ +  +E++  
Sbjct: 767 LEKLGAVFNQVSFPLEYTPRKFAIHADSAHLVVIETEHNAYTDETKQQ 814



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 41/294 (13%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 870
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAV 990

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 931  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 971
             N+  +R  + G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRL-ATGINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 972  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +RS+         KN +DGDL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPVKNVIDGDLCEQFNSIEPAKQKSISGDLERTPSEVSKKLEDI 1211


>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
          Length = 1218

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 185/828 (22%), Positives = 345/828 (41%), Gaps = 103/828 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + + +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNMTLQRGSGITHAIHGNFSGGKVQEILVSRGKSLELMRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I  L  FR  G  +D++ + ++  +  +L++   S  ++ +   +   + G R    GQ
Sbjct: 61  IIRALMSFRQSGGTKDYIVVGSDSGRIVILEY-LPSKNVLDKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQL-------KEAFNIRLEELQVLDIKFLY 170
              IDP  R  +IG      L  +   D + +L           N  +  +  +D+ F  
Sbjct: 120 YLAIDPKGRAIMIGAVEKQKLVYIPNRDAEARLTISSPLEANKSNTLVYHMVGIDVAF-- 177

Query: 171 GCAKPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLL 219
               P    L  D ++     T E     +    F E  +  N+        L+  A+ L
Sbjct: 178 --DNPIFACLEIDYEEVDADPTGEAVQTTRQTLTFYEVDFGLNHVVRKYSEPLEEHANSL 235

Query: 220 IPVPPPL---CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------- 267
           I VP       GVLI  E  I Y   N  +   IR  I +    +D D  R         
Sbjct: 236 ITVPGDKDGPGGVLICSENYITY--KNQGEQSDIRCPIPRRRNDLD-DPERGMILVCSAT 292

Query: 268 --------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSS 319
                   +L+    G +  + +   +E VT ++++      +AS +  L    +++ S 
Sbjct: 293 HKTKSMFFFLVQTEQGDVFKVTLETNEEFVTEIRLKYFDTVPVASAMCVLKTGFLFVASE 352

Query: 320 YGDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCV 356
           +G+  L ++             +  P  +G       R +          +L PI+   V
Sbjct: 353 FGNHYLYQIANLGDDDDEPEFSSAMPLEEGDTFFFAPRQLRNLVLVDEMDSLSPIMACQV 412

Query: 357 VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDT 415
            DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ FD 
Sbjct: 413 ADLAAEDTPQLYMACGRGSRSTLRVLRHGLEVSEMAVSELPGSPNAVWTVKRRADENFDA 472

Query: 416 FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
           +++VSF + T +L++   + +EE    GF   T TL C     + +VQ+    VR + S 
Sbjct: 473 YIIVSFSNATLVLSIG--ETVEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPNGVRHIRSD 530

Query: 476 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK-HAQLEYEIS 533
            R   ++WK+P    +    AN  QV++A GGG LVY E+   G L E K   ++  ++ 
Sbjct: 531 KR--MHDWKAPEKKKIVKCAANQRQVVIALGGGELVYFEMDPTGHLNEHKDRKEMNSDVL 588

Query: 534 CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFE- 591
           C+ +         S+  AVG+ TD +VRI SL   + + +  +     +P S  LC  E 
Sbjct: 589 CMALANAPSGEQMSRFLAVGL-TDETVRIISLDTTDCLVQLKMQAIPAMPES--LCIVEM 645

Query: 592 ----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
                            + YL   L +G LL  +L+  TGE+ D +   LG +P+ L   
Sbjct: 646 GASDGGSSDEPAMNSLSMLYLNIGLQNGVLLRTVLDGVTGEMADTRARYLGGKPVKLFKI 705

Query: 636 SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            ++    V A S R  + Y    +   + ++ + + +   F+S   P+ +       L I
Sbjct: 706 RTRGNEAVLAMSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISGNTLRI 765

Query: 696 GTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE 742
             ++ +  +  + S P+   PR+      S    +   ++ +  E+++
Sbjct: 766 LALEKLGAVFNQVSFPVEYTPRKFVIHPDSAHLIVVETEHNAYTEQTK 813



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 39/293 (13%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILAL 871
            L+L+ +        ++  F G+++  I + ++LY     D G ++L  +C +    +L +
Sbjct: 938  LELVHKTTVDNVPTAICGFQGRVIIGIGRILRLY-----DIGKKKLLRKCENKQIPLLIM 992

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 931
             ++  G  I V D+ +S+ ++ YK  E  +   A D    +++A+EILD +    A+   
Sbjct: 993  GIRVMGCRIYVSDVQESVYMVRYKRNENQLIIFADDTQPRYITAMEILDYNTVATADKCG 1052

Query: 932  NLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLV 972
            N+  VR  S   +DE            +RG L       + +  +H+GE     +  +L+
Sbjct: 1053 NISVVRLAS-SISDEVDDDPTGNKSLWDRGLLNGASQKADFIVNFHIGEICTSIQKATLI 1111

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                    G   ++++ TV G IGV+     HE+  F + L+ ++R     + G +H  +
Sbjct: 1112 -------PGGSESLVYATVTGTIGVLVPFTAHEEQDFFQHLEMHMRSENPPLCGRDHLSY 1164

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            RS+         KN  DGDL E +  +   +   I+  ++ +  E+ KR+E++
Sbjct: 1165 RSY-----YFPVKNVCDGDLCEQYNSIDIAKQKSIAADLDKTPAEVSKRLEDI 1212


>gi|302822731|ref|XP_002993022.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
 gi|300139222|gb|EFJ05968.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
          Length = 1277

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 196/853 (22%), Positives = 345/853 (40%), Gaps = 135/853 (15%)

Query: 321  GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
            GD  ++K+    D + S+   ++   N+ PI+DF +VD   + Q Q+  C G  ++GS+R
Sbjct: 402  GDGHVLKVE---DGQLSFQSFVQ---NIAPILDFSLVDYYGEKQDQMFACCGGDEEGSVR 455

Query: 381  IVRNGIGINEQASVE--LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            I+RNG  + +        QG+ G+W++R    DP+  F ++SF+ ETR+L++ L + ++ 
Sbjct: 456  IIRNGNSVEKLICTPPVYQGVSGIWTMRYRFKDPYHAFFLISFVEETRVLSVGL-NFVDI 514

Query: 439  TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST----------SRELRNEWKSPPG 488
            T+  GF SQ  TL C       + QV    V+L S T          S  L   W+  PG
Sbjct: 515  TDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAAHPAGVSGSSPLSTTWRK-PG 573

Query: 489  YSVNVATANASQVLLATGGGHLVYLEIGDGI-------LTEVKHAQLEYEISCLDINPIG 541
            Y ++V     S+V+LA     L+ L +G          L E++   +E EISC+ I P G
Sbjct: 574  YPISVGAVCRSRVILALARPGLL-LMLGTTQTSAESFELVELQLCMMEAEISCISI-PQG 631

Query: 542  E--NPSYSQIAAVGMWTDISVRI----------------------------FSLPDLNLI 571
            +   P    IA +     +   +                            F++  ++LI
Sbjct: 632  DISIPVPPTIAGLHAGNTVPAGVDLGNVCVVGTHKPSVELLSIVPGDKFAPFAVGQVSLI 691

Query: 572  TKEHLGGEI---IPRSVLLCAFEGISYLLCALGDGHLLNF--------LLNMKTGELTDR 620
            T   +G  +   IP+ V L  F+ + Y+L  L +G LL +        L+  K  EL   
Sbjct: 692  TS--VGTAVSGCIPQDVRLALFDRL-YILAGLRNGMLLRYEWPEDTPSLVLSKPAELHLI 748

Query: 621  KKVSLGTQPITLRTF-SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 679
                LG  P+ L    +      + A SDRP ++  + K++ Y++++ +  +H  P  S 
Sbjct: 749  AARRLGVSPVCLVPLEACALRADIIALSDRPWLLQMA-KRISYTSISFQPSTHATPVCSK 807

Query: 680  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ---- 735
              P  +    +  L +  ++  + L+++ + LG   RR+ +  +S    +  L ++    
Sbjct: 808  DCPKGIIFLADCSLHLVEMEQSRTLNVQKLRLGCTGRRVLYHPESGVLIVLRLLSEHRSD 867

Query: 736  -SCAEESE-----------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
              C E                    M  ++L D+Q    + T   DT     ++++   +
Sbjct: 868  VCCIEPLSGAVLCVHPFGVGQIVKCMELMKLGDEQLL-LVGTAS-DTRR---AVMATGEA 922

Query: 778  DDSNVYYCVGTAYVLPEEN--------------------------EPTKGRILVFIVEDG 811
            +    Y+CV      P  +                          E + G  +VF  +D 
Sbjct: 923  ERQAFYFCVSNTGYFPSSSRGVLVVLYLDAPPPPSPHSPMSSPASESSGGASIVFQPDDY 982

Query: 812  KLQLIAEKETKGAVYSLNAFNGK-LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA 870
                 A     G V ++ ++ G+ +LA     +        D+  R  +         + 
Sbjct: 983  CFVPRANVGLPGPVNAVASYLGQYVLACAGNHLFCLGIASMDESPRRWKKLASIKTRFVI 1042

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA--E 928
              +  R   I VGD    + L  Y+ +   +E    D     +S   ++D D  +     
Sbjct: 1043 TSISVRFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVDRH 1102

Query: 929  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR--HGSLVMRLPDSDVGQIPTV 986
             NF   +  + +EG    E+  LE    +H+GE     R    S  +    S    +  V
Sbjct: 1103 GNFCALSTNEETEGNGSPEK-NLEAHCWFHIGEVCTTVRKVRTSRFLCKDTSRECSVSCV 1161

Query: 987  IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 1046
            I  T+ G + +   +  E+Y  L+ LQ  L  +      L ++  R F  + +    K  
Sbjct: 1162 IATTLLGSVFIFVRITGEEYSLLQALQRRLSFLPATAPVLGNDHAR-FRGQGRPAGVKEV 1220

Query: 1047 LDGDLIESFLDLS 1059
            LDGDL+E FL+L+
Sbjct: 1221 LDGDLLEQFLELT 1233


>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
          Length = 933

 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 135/579 (23%), Positives = 254/579 (43%), Gaps = 92/579 (15%)

Query: 356 VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFD 414
           V+DL  + Q Q+   +G     ++R++R G+ I + A   L GI  G+W++  S +D  D
Sbjct: 246 VMDLVNEEQPQIYALTGVADRSAMRVLRYGLPIAQIAGTPLPGIPSGLWTIPRSQEDSID 305

Query: 415 TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
            ++VVSFI  T +L++   + +EE    G  + T ++       + ++QV    +R +  
Sbjct: 306 KYIVVSFIGSTLVLSVG--ETVEEVVDSGILATTTSILVRPIGADSIIQVFPHGIRHIKG 363

Query: 475 TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEIS 533
             R   NEW++P   ++++AT+NA+QV++A GGG ++Y E+   G L+EV   +   EIS
Sbjct: 364 DRR--INEWRAPGRKTISLATSNATQVVIALGGGEVIYFELDAAGNLSEVAKKEFRREIS 421

Query: 534 CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK------EHLGGEIIPRSVLL 587
            L+I P+ +    ++  A+G W +  VR+ SL   NL+ +      E +  E +  + + 
Sbjct: 422 ALEIAPVRKGRQMARFVAIGDW-EGPVRVLSLDKDNLLNQVSVLDTERMHIESLMMNEMT 480

Query: 588 CAFE-----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
              E                        + +L   L +G +   +++  TGEL+D +   
Sbjct: 481 IGVEMPEGTASSSSAIAKQQQLQNQSNQVLFLNVGLKNGVMKRAVVDPITGELSDTRTRL 540

Query: 625 LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
           LG +P+       K+   V A S R  + Y +  +     V+++ + +   F+S   PD 
Sbjct: 541 LGRKPVKFSRVKLKSGNAVLALSSRVWLCYVNQGRYDMVPVSVEPLDNASGFSSEHCPDG 600

Query: 685 LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 735
           +    E  L I  I+ + +K +  ++P    PRR     Q  T  I S++ +        
Sbjct: 601 IVATSENNLKIFVIEKLSEKFNQVNVPYKCTPRRFVVHPQ--THYIVSIETEHNYLNELP 658

Query: 736 --------SCAEESE---------------------------------MHFVRLLDDQTF 754
                     AE+ +                                 + ++R+L+  ++
Sbjct: 659 TPKENGSNKMAEDKDPEVKREGDDMDYEVDQFSLNQNDKPPKAGDGKWLSYIRVLEPVSY 718

Query: 755 EFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKGRILVFIVED 810
             +    LD  E   S+ +C F D +  V+  VG    +   P + E     +  F    
Sbjct: 719 RTLDLVKLDQDEAAYSLATCIFHDREGEVFLAVGCGKGVQLNPRKVESASIHLYRFTNNG 778

Query: 811 GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 849
             LQL+ + E +   Y+++ F G+LL  I  ++++Y+ +
Sbjct: 779 QTLQLVYKTEVEEVPYAISHFQGRLLVGIANQLRIYEMV 817



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 15/140 (10%)

Query: 948  RGRLEV--VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHE 1004
            +GRL V    +  + E VN     SL        VG    +++ T+NG IG +   +  E
Sbjct: 800  QGRLLVGIANQLRIYEMVNHISKTSL-------SVGGPEVLVYATLNGTIGALVPFVSRE 852

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
               F   L+  +R+    + G +H  +RS+         KN +DGDL E ++ L  T+  
Sbjct: 853  DVDFYTSLELQMRQENPPLCGRDHLAYRSY-----YFPVKNVIDGDLCEQYISLDPTKQQ 907

Query: 1065 EISKTMNVSVEELCKRVEEL 1084
             I++ ++ S  E+ K++E+L
Sbjct: 908  SIAEELSRSPSEILKKLEDL 927



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 31/245 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPI 58
           ++ Y +T  KPT++ HS VGNF+  +++ ++++    +E  LL P      +  +L   +
Sbjct: 1   MYLYNLTIQKPTSIYHSIVGNFSGTKQIEILVSHGRSLE--LLRPDETNGKITSVLYTEV 58

Query: 59  YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDN 117
           +G I ++  FR     +D++ I +E  +  +L+++   +    +   +   R G R    
Sbjct: 59  FGLIRSIAPFRLTSGTKDYIIIGSESGRVVILEYNPNKNRF-EKVHQETFGRTGCRRIVP 117

Query: 118 GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY----- 170
           GQ    DP  R  +IG      L  ++  D+  +L    +  LE  +   I F       
Sbjct: 118 GQYLATDPRGRAFMIGAIEKQKLVYILNRDSAARL--TISSPLEAHKSHTILFAMCGVDV 175

Query: 171 GCAKP---TIVVLYQDNKDARHVKT---------YEVALKDKDFVEGPWSQNNLDNGADL 218
           G   P   T+ V Y D+ D   ++          YE+ L   + V   WS+  +++ ++L
Sbjct: 176 GFENPIFATLSVDYSDDTDLEEMEDNHSKMMLTFYELDLGLNNVVRK-WSE-EVESSSNL 233

Query: 219 LIPVP 223
           L+ VP
Sbjct: 234 LMTVP 238


>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
 gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
          Length = 1217

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 180/826 (21%), Positives = 344/826 (41%), Gaps = 96/826 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +L  FR  G  +D++ + ++  +  +L++   +  +  +   +   + G R    GQ
Sbjct: 61  IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEY-IPAKNVFEKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAK 174
              IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G   
Sbjct: 120 YLAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPV 222
           P    L  D ++A    T + A+K +            + V   +S+  L+  A+ L+ V
Sbjct: 180 PMFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEP-LEEHANFLVSV 238

Query: 223 P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
           P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239 PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATH 293

Query: 268 -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                  +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +
Sbjct: 294 KTKSMFFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEF 353

Query: 321 GDSQLIKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVV 357
           G+  L ++             +  P  +G       R +          +L PI+   V 
Sbjct: 354 GNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVA 413

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
           DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ +D +
Sbjct: 414 DLANEDTPQLYITCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAY 473

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
           ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  
Sbjct: 474 IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADK 531

Query: 477 RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
           R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C
Sbjct: 532 R--VNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMC 589

Query: 535 LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE---------------HLGGE 579
           + +  +      S   AVG+  D +VRI SL   + +                   +G +
Sbjct: 590 MALGNVAIGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAK 648

Query: 580 IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
               S  L   +   YL   L +G LL  +L+  +G+L D +   LG++ + L     + 
Sbjct: 649 DANNSEELSLQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRAVKLFRIKMQG 708

Query: 640 TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
              V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  ++
Sbjct: 709 NQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALE 768

Query: 700 DIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
            +  +  + S PL   PR+      S    I   ++ +  EE++  
Sbjct: 769 KLGAVFNQISFPLEYTPRKFAIHSDSAHLIIIETEHNAYTEETKQQ 814



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 134/294 (45%), Gaps = 41/294 (13%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 870
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAV 990

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 931  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 971
             N+  +R  S G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRLAS-GINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 972  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +RS+         KN +DGDL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPIKNVIDGDLCEQFNSIEPAKQKSISSDLERTASEVSKKLEDI 1211


>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
           Japonica Group]
 gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
           Japonica Group]
 gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
          Length = 1234

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 188/830 (22%), Positives = 336/830 (40%), Gaps = 96/830 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQEL---------------NLIIAKCTRIEIHLLTP 47
           ++ Y +T  + T    + +G+F+                     + +A+ T +E+    P
Sbjct: 1   MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSSSSSSSTQEIAVARGTTLELLRPDP 60

Query: 48  QG--LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG 105
           +   L+ +L V ++G I +L  FR  G  +D+L + ++  +  +L++  + + L      
Sbjct: 61  ETGRLRTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRLDKVHQE 120

Query: 106 DVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQV 163
                  R    GQ+  +DP  R + +   +   L  V+  D   +L  +  +   +   
Sbjct: 121 TFGKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNT 180

Query: 164 LDIKFLY---GCAKPTIVVL---YQDNKDARHVKTYEVALKDKDFVEGPWSQNN------ 211
           L         G   P    +   Y ++      +  E A K   F E     N+      
Sbjct: 181 LTFSLTALDCGFDNPVFAAIELEYAESDRDPTGQAAEQAQKHLTFYELDLGLNHVSRKAS 240

Query: 212 --LDNGADLLIPVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGR--V 261
             +DNGA+LL+ VP       G+L+  +  ++Y +         IP R  +    G   V
Sbjct: 241 EPIDNGANLLVTVPGGGDGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRADLPAERGVLIV 300

Query: 262 DADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
            A   R      +LL    G +  + + H  + VT L+I+      + S I  L +  ++
Sbjct: 301 AAATHRQKSLFFFLLQTEYGDIFKVDLEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLF 360

Query: 316 IGSSYGDSQLIKLN--------------------------LQPDAKGSYVEVLERYVNLG 349
             S +G+  L +                             QP A  +   + E   +L 
Sbjct: 361 AASEFGNHALYQFRDIGRDVDVESSSATLMETDEGFQPVFFQPRALKNLYRIDE-IESLM 419

Query: 350 PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSS 408
           PI+D  V +L  +   QV T  G     +LRI+R G+ I+E A   L      +W+++ +
Sbjct: 420 PIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKN 479

Query: 409 TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
            +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV    
Sbjct: 480 INDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNG 537

Query: 469 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ 527
           +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+   
Sbjct: 538 IRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQD 595

Query: 528 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
           +  +++CL I P+ E    S+  AVG + D ++RI S+ PD  L           P S++
Sbjct: 596 MSGDVACLAIAPVPEGRQRSRFLAVGSF-DNTIRILSVDPDDCLQPLSVQSVSSAPESLM 654

Query: 587 LCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
               +               +L   L +G L    ++M TG+L+D +   LG +P  L  
Sbjct: 655 FLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFP 714

Query: 635 FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
               +   +   S RP + Y      L + ++   +     F+S    + +       L 
Sbjct: 715 CIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALR 774

Query: 695 IGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 742
           I TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E
Sbjct: 775 IFTIEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEERE 824



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 44/365 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 801
            +R+LD ++ +      L   E   SI + +F D +      VGTA  L   P+ N  + G
Sbjct: 883  IRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL-SAG 941

Query: 802  RILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
             I ++  V++G+ L+L+ + + +    +L  F G+LLA +   ++LY     D G R+L 
Sbjct: 942  FIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLL 996

Query: 860  SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
             +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   
Sbjct: 997  RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1056

Query: 919  LDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLG 960
            +D D   GA+   N++  R                  K  +G  +    ++E + ++H+G
Sbjct: 1057 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1116

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKV 1019
            + V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+ 
Sbjct: 1117 DVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQE 1169

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
               + G +H  +RS          K+ +DGDL E F  L      +I+  ++ +  E+ K
Sbjct: 1170 HPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPSLPADMQRKIADELDRTPGEILK 1224

Query: 1080 RVEEL 1084
            ++E++
Sbjct: 1225 KLEDI 1229


>gi|444722328|gb|ELW63026.1| Splicing factor 3B subunit 3 [Tupaia chinensis]
          Length = 840

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 196/905 (21%), Positives = 367/905 (40%), Gaps = 162/905 (17%)

Query: 268  YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+  L +
Sbjct: 4    FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ 63

Query: 328  L----NLQPDAKGSYVEVLER----YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSL 379
            +    +   + + S    LE     +    P+ +  +VD E      ++ C         
Sbjct: 64   IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVD-ELDSLSPILFCQ-------- 114

Query: 380  RIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
                    ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + +EE
Sbjct: 115  --------VSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--ETVEE 164

Query: 439  TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA 498
                GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++     N 
Sbjct: 165  VTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKCAVNQ 222

Query: 499  SQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 556
             QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG+  
Sbjct: 223  RQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGL-V 281

Query: 557  DISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYLLCA 599
            D +VRI SL   + +  + L  + +P +   LC  E                G  YL   
Sbjct: 282  DNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIG 339

Query: 600  LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
            L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS   +
Sbjct: 340  LQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSR 399

Query: 660  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR- 717
               + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   PR+ 
Sbjct: 400  FHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKF 459

Query: 718  ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM---------- 743
            + H E +            T A  + + Q  AEE             +EM          
Sbjct: 460  VIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLP 519

Query: 744  ---------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC-VG 787
                             +R+++      +    L+  E   S+  C FS+    +Y  VG
Sbjct: 520  ESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVG 579

Query: 788  TAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
             A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + + ++
Sbjct: 580  VAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLR 639

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
            +Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  E  +
Sbjct: 640  VY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQL 692

Query: 902  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGRLEVVGEYHL 959
               A D    W++   +LD D   GA+   N+  VR   N+    DE+            
Sbjct: 693  IIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDED------------ 740

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
                                 G       G +NG          + + F + ++ +LR  
Sbjct: 741  -------------------PTGNKALWDRGLLNGA-------SQKDHDFFQHVEMHLRSE 774

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
               + G +H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E+ K
Sbjct: 775  HPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSK 829

Query: 1080 RVEEL 1084
            ++E++
Sbjct: 830  KLEDI 834


>gi|308505958|ref|XP_003115162.1| CRE-TEG-4 protein [Caenorhabditis remanei]
 gi|308259344|gb|EFP03297.1| CRE-TEG-4 protein [Caenorhabditis remanei]
          Length = 1013

 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 184/795 (23%), Positives = 337/795 (42%), Gaps = 94/795 (11%)

Query: 6   YVVTAHKPTNVTHSCVGNFT-SPQELNLIIAKCTRIEIHLL-TPQG-LQPMLDVPIYGRI 62
           Y +T    T +  +  GNF+ +P+   ++I + + +E+  L T  G ++ M    I+G +
Sbjct: 4   YNLTLQGQTAINQAIQGNFSGTPKSQEIVIGRGSALELLTLDTVTGKIKVMCHQDIFGIV 63

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQ 119
            +L  FR     +DF+ + ++  +  +LQ++AE +    L     G    R   P   G 
Sbjct: 64  RSLLAFRLTAGTRDFIAVGSDSGRIVILQYNAEKTCFERLHQETFGKTGCRRIVP---GH 120

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               DP  R  +IG      L  ++  D++  L  +  +   +   L    +    G   
Sbjct: 121 YLAGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLEAHKHHTLCYAMVGVDVGFEN 180

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
           PT   L  D +D+ +  T E A + +    F E     N+        L++  +LLI VP
Sbjct: 181 PTFACLEFDYEDSDNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLNDPGNLLIAVP 240

Query: 224 ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                  GV++  E  +VY   N      IR  I +    +D D  R             
Sbjct: 241 GGNDGPSGVIVCCENYLVY--KNLGDQPDIRCPIPRRRNELD-DADRTMLIIATATHKTR 297

Query: 268 ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
               +L+    G +  + +  +++ VT +K++       A+ +  L    ++I + +G+ 
Sbjct: 298 NMFFFLVQAENGDIFKVTLETDEDLVTEMKLKYFDTVPPANAMCILKAGFLFIAAEFGNH 357

Query: 324 QLIKLN-----------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
           +L ++                         +P    S + + +   +L P+ D  + D+ 
Sbjct: 358 ELYQIASLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPI-DSMDSLSPLTDAVIGDIA 416

Query: 361 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
           R+   Q+ T  G      ++++RNG+ I+E A  +L G    +W+++ + +D +D+++VV
Sbjct: 417 REDAAQLYTLIGRGSRSHMKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVV 476

Query: 420 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
           SF++ T  LA+ + D +EE    GF   T T+ C     + LVQV    +   S   R +
Sbjct: 477 SFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQVIRNQI--YSEGIRHI 532

Query: 480 R-----NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQL-EYEI 532
           R     NEWK PP   +     N  QV +A  GG LVY E+  +G L E    +L   +I
Sbjct: 533 RADKRINEWKVPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADI 592

Query: 533 SCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF- 590
           +C+  + I E    S+  A+G   D +VRI SL P+  L+          P S+LL    
Sbjct: 593 ACMTFSEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTP 651

Query: 591 ----EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
               +G++  +L   L +G L    ++  TG + D +   LGT+P+ L     +  + + 
Sbjct: 652 NEDGKGVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSAIL 711

Query: 645 AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ-K 703
             S R  ++Y   ++   + ++   + +   F S    + +       L I   + +   
Sbjct: 712 CTSSRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGIVAISASTLRIIAAEKLGVA 771

Query: 704 LHIRSIPLGEHPRRI 718
            +++S      PRR+
Sbjct: 772 FNVQSFEHKLTPRRV 786


>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
          Length = 1201

 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 180/823 (21%), Positives = 343/823 (41%), Gaps = 106/823 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  +   +++++   +E+    P    +  +L V ++G
Sbjct: 1   MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +L  FR  G  +D++ + ++  +  +L++   +  +  +   +   + G R    GQ
Sbjct: 61  IIRSLMAFRLTGATKDYIVVGSDSGRIVILEY-IPAKNMFDKVHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVV 179
              IDP  R + +     L    P +         N  +     +D+ F      P    
Sbjct: 120 YLAIDPKGRAVMIEAR--LTISSPLEAHKS-----NTLVYHTVGVDVGF----DNPMFAC 168

Query: 180 LYQDNKDARHVKTYEVALKDK------------DFVEGPWSQNNLDNGADLLIPVP---- 223
           L  D ++A    T + A+K +            + V   +S+  L+  A+ L+ VP    
Sbjct: 169 LEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEP-LEEHANFLVSVPGGND 227

Query: 224 -PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------------- 267
            P   GVLI  E  + Y   N      IR  I +    +D D  R               
Sbjct: 228 GP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFVCSATHKTKSM 282

Query: 268 --YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
             +L     G +  + +  +++ VT +K++      +A+++  L    +++ S +G+  L
Sbjct: 283 FFFLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYL 342

Query: 326 IKL-------------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDLERQ 362
            ++             +  P  +G       R +          +L PI+   V DL  +
Sbjct: 343 YQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANE 402

Query: 363 GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSF 421
              Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF
Sbjct: 403 DTPQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSF 462

Query: 422 ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
           ++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R   N
Sbjct: 463 VNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VN 518

Query: 482 EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINP 539
           EWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  
Sbjct: 519 EWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGN 578

Query: 540 IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS---- 594
           +      S   AVG+  D +VRI SL   + +    +  + +P +   LC  E  +    
Sbjct: 579 VAVGEQRSWFLAVGL-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGAKEAD 635

Query: 595 ------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
                       YL   L +G LL  +L+  +G+L D +   LG++P+ L     +    
Sbjct: 636 NSEDSAPQQSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 695

Query: 643 VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ 702
           V A S R  + Y    +   + ++ + +     F+S   P+ +       L I  ++ + 
Sbjct: 696 VLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLG 755

Query: 703 KLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
            +  + S PL   PR+      S    I   ++ +  EE++  
Sbjct: 756 AVFNQVSFPLEYTPRKFAIHTDSAHLVIIETEHNAYTEETKQQ 798



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 41/276 (14%)

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKS 888
            + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D+ +S
Sbjct: 939  YQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAVVSINAIGQRIYVSDVQES 992

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE-- 946
            +  + YK +E  +   A D +  +++   +LD D    A+   N+  +R  + G  D+  
Sbjct: 993  VYAVRYKRQENQLIVFADDTHPRFITTTCVLDYDTVATADKYGNIAVIRL-ATGINDDVD 1051

Query: 947  ----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
                      +RG L       + V  +H+GE V   +  +L+        G   ++++ 
Sbjct: 1052 EDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSESLVYT 1104

Query: 990  TVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            T++G +GV+     HE + F + L+ ++R     + G +H  +RS+         KN +D
Sbjct: 1105 TLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YYPVKNVID 1159

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            GDL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1160 GDLCEQFNSIEPVKQKSISGDLERTPSEVSKKLEDI 1195


>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
 gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
          Length = 1236

 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 266/1221 (21%), Positives = 468/1221 (38%), Gaps = 173/1221 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT--PQGLQPMLDVPIYGRIA 63
            Y +T   P+    +  G+F    +  ++ A  +R+ I  ++   +G Q +    ++G + 
Sbjct: 10   YALTVKHPSATQDAISGDFLGNGKQQILTANGSRLAILEVSRRQKGFQELYSQDMFGIVR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             +  FR  G  +D + I T+  +    ++  +     T           R    G+    
Sbjct: 70   RIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEHAFKTVHFETYGKSGIRRVVPGEYLAA 129

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCAKPTIV 178
            DP  R I L   +    V      GQ   A +  LE  +   + +       G   P   
Sbjct: 130  DPKGRAIMLASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNPMFA 189

Query: 179  VLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPP- 224
             +  D   +             + V  YE+ L     V   WS+  +D  A+ L  VP  
Sbjct: 190  SIEVDYSSSETDPSGEAYDEIKKEVVYYELDLGLNHIVRK-WSEP-IDRTANTLFRVPGG 247

Query: 225  --PLCGVLIIGEETIVY-----CSANAFK-AIPIR--PSITKAYGRVDADGSRYLL--GD 272
                 GVL+ GE+ I Y        N  + AIP R  P+      R+   G+ Y L  GD
Sbjct: 248  ANAPSGVLVCGEDNITYRRIFNQKENVHRLAIPRREGPTEDPNRKRMIVAGTLYSLKGGD 307

Query: 273  HAGLLHL-------LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
               LL         L +     KV  +KI+      + ++I  L    VY     GD  L
Sbjct: 308  FFYLLQTEDGDVFKLTVEASNGKVEKIKIKYFDTIPVCTSICILRAGFVYAACESGDRIL 367

Query: 326  IKLN-----------------LQPDAKG----------SYVEVLERYVNLGPIVDFCVVD 358
             +L                  +  DAK           + +  +E+  +L PI+   V +
Sbjct: 368  YELESLGDETEDPLFSSDQFPVDTDAKFAPPYFKPRALTNLTAVEQMPSLNPIMGMEVAN 427

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFL 417
               +   Q+ T +G     S R  RN + + +     L Q    +W+ + ++DD  DT +
Sbjct: 428  PALEDAPQIYTINGTGGRSSFRSTRNALEVLDLIESPLPQNASDVWTTKLTSDDETDTLI 487

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV----- 472
            V+     +R L + + D++EE    GF   T TL       + ++Q+    +R +     
Sbjct: 488  VLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQF 545

Query: 473  ----SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA- 526
                ++ + +   +W+ P   ++     N  QV +A   G ++Y E   DG L   +   
Sbjct: 546  PDNDANATHQSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEI 605

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDL--NLITKEHLGGEIIPR 583
             L+  I+CL +  + E    +   AVG  +D +VRIF+L PD+  N++    +     P 
Sbjct: 606  ALDSTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIFNLSPDMEGNILRSISVQALTSPP 664

Query: 584  SVLLCAF------EGIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            S L           G S +L   L  G  +  +L+  TG++ D ++  LG +PI     +
Sbjct: 665  SDLTINLMSDKSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVT 724

Query: 637  SKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
                  + A + RP + Y+  +   L  + +N         F+ + F   + ++   EL 
Sbjct: 725  VAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNFDGSQFKGIICVSAN-ELR 783

Query: 695  IGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQT 753
            I T +D+       +IPL   PR++    +   F I   +  +   ++  + ++    Q 
Sbjct: 784  IFTFNDLTDNTTYENIPLKYTPRKMVGYHEQGIFYIIESECNTLNADTRQNLIQKASKQD 843

Query: 754  ----------FEFISTYPLDTFEY--------GC----------------------SILS 773
                       E     P   F Y         C                      S++S
Sbjct: 844  ENGNGEATNGTEESDELPAVDFGYPRAQGRWASCIQAVDPVSEKAVTHTIELKTNQSLVS 903

Query: 774  CSF----SDDSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVY 826
             +     S   + +  VGTA  L   P +      +I        + +   E E      
Sbjct: 904  AALVFFESRGEDAFLAVGTAKDLSFTPYKYSGASIQIYKISPNGREFEFFHETEVGEPPL 963

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 886
            +L AF GKL+A + + + LY   ++    R+ Q+       I    ++T+G  +VV D  
Sbjct: 964  ALLAFKGKLIAGVGRHLCLYDCGMK-SVLRKAQAPNCVATRITD--IKTQGSRLVVSDQA 1020

Query: 887  KSISLLIYKHE--EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSE 941
            +S++ +++K +     +   A D      SA ++LD +  +G +   N++ VR   K SE
Sbjct: 1021 QSVTYVVHKDQVHPNRLIPFADDTVPRHTSASDMLDYETTVGGDKFGNIWLVRCPPKVSE 1080

Query: 942  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQIPTVIFGT 990
             + +   G   +V +  LG   NR     LV     +D+           G    + +  
Sbjct: 1081 ASDESPDGSDLLVDKSFLGGTPNRL---DLVAHYFANDIPVSIQKTVLLSGGERIIFWAG 1137

Query: 991  VNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 1049
            + G +G +       Q+   ++L+  LR+  K + G +H  +RS+    K V     +DG
Sbjct: 1138 LQGTLGALIPFNSRRQHKMFQQLELQLRQDDKPLSGRDHLAYRSYFAPVKCV-----IDG 1192

Query: 1050 DLIESFLDLSRTRMDEISKTM 1070
            DLIE FL LSR + + I+  M
Sbjct: 1193 DLIERFLVLSRDKRESIAGQM 1213


>gi|406700450|gb|EKD03620.1| hypothetical protein A1Q2_02097 [Trichosporon asahii var. asahii CBS
            8904]
          Length = 1119

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 211/874 (24%), Positives = 345/874 (39%), Gaps = 158/874 (18%)

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIEL--LGETSIASTISYLDNAVVYIGSSYGDSQLI 326
            LLGD  G   L  +  E E +  +++ +  +G  S  S+++YLDN  ++  S+ GDS L+
Sbjct: 291  LLGDEYG--RLTAVGWEFEDMEKVQVGMIDMGVVSAPSSLTYLDNGYLFSASACGDSLLV 348

Query: 327  KLNL-------QPDAKG----------------------SYVEVLERYVNLGPIVDFCVV 357
             L L       QP  KG                        V+V ER++N+ P  DF +V
Sbjct: 349  YLVLPSPNSTRQPSGKGKEKAHDISDAGAYEIVTAEPQHGRVDVRERWMNIAPAKDFAIV 408

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTF 416
              +      VV  SG+    S R+VR+G+G     ++E + GI+ MW++ ++ D P    
Sbjct: 409  KEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIPGIERMWTIPAA-DGPS--- 464

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            L+VSF   T IL   LE E+   +     +   T        + L+QVT   +RL S  +
Sbjct: 465  LLVSFAYSTTIL--QLEPEVSVFKAADQVTAVPTFAAGLVDKSLLLQVTPEGIRLWSDLA 522

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLD 536
                         + NV     ++++ A   G++      DG +T  + +          
Sbjct: 523  AGT---------LAGNVDAPEDNRIVTANVRGNIAVAAFRDGTVTLFRASSQ-------- 565

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI--- 593
                G         A+  W           ++ L+  E      + +S+   A+      
Sbjct: 566  ----GLQEVVKGFLAIADWCG---------EIELVAVEGADQGTVLKSIREAAYATSLQF 612

Query: 594  -------SYLLCALGDGHLLNFLLNMKTGELTD-RKKVSLGTQPITLRTF--SSKNTTHV 643
                   + +L  L DG  +++ + +   E +D R   SLG +P+ L T   S     HV
Sbjct: 613  QESNNEPTRMLAGLSDGTFVSYSVKLNGAECSDNRHASSLGLRPLRLITLDISPNAEEHV 672

Query: 644  FAA--SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 701
             AA  SDR ++++ S     +S+   K +                           +  +
Sbjct: 673  VAAGISDRLSLVFESRDHYEFSSSGKKGI-----------------------VFERLTSL 709

Query: 702  QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES----EMHFVRLLDDQTFEFI 757
            +KL ++++ LG                +     +S   ++    +   V L +  T E +
Sbjct: 710  KKLQVQTLDLGNRSATRVAALPGYNLVVAGTVTRSMDHQTGDVLQSSSVELRNATTLELL 769

Query: 758  STYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE----------------PTKG 801
            S + L   E   S+ + +       Y  VGTA     ENE                  +G
Sbjct: 770  SEFQLPEREAVASVNAVTL--HGRKYILVGTAIF---ENEDALEDATLEDVTSFIATNRG 824

Query: 802  RILVFIVEDG---KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 858
            R+L+F + +     L L+      G VY     +G L  A + K+ + +   +     E 
Sbjct: 825  RLLLFQINESAGPSLDLVTSMTFNGPVYDTVVIHGFLAVATSTKVSILRLTTQPPSLEEA 884

Query: 859  QS-ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW---MS 914
             S       H LA+    +   +VVGD M+SI +L    E G I    RD NA+    +S
Sbjct: 885  ASFAFAFETHHLAVVEIDKEKRLVVGDAMRSIIVLSVDPESGDIVGDQRDMNAHLVRCLS 944

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AV  ++  + + A+N  NL T R   +G T              L E V R + G+L   
Sbjct: 945  AVHDVEPGVMI-ADNYANLLTFRLG-KGITP--------AASIGLSEDVTRLQPGTLA-- 992

Query: 975  LPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
             P S  G I    ++  TVNG +GVI  L       L+ LQ N+ K+ KG GGL   +W+
Sbjct: 993  -PVSAEGDILRADLLCTTVNGRLGVIGELGKGSIRTLDDLQRNMNKLYKGPGGL---EWK 1048

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
               N     +   F+DGD ++ F  L  +  D+I
Sbjct: 1049 ESGNMLVPRETVGFIDGDFVQRFSSLDSSLQDKI 1082


>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
          Length = 1232

 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 179/794 (22%), Positives = 338/794 (42%), Gaps = 89/794 (11%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPIYGR 61
           Y +T  K   +  +  GNF   ++  +++ +   +E  LL P      L  +    IYG 
Sbjct: 13  YNLTLQKTARINQAVHGNFAGTKQQLIVVGRGKILE--LLKPDSTTGNLTSLCVTEIYGV 70

Query: 62  IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
           + +L+ FR  G  +D+L + T+  +  VL++D +++ L  +   +   + G R    GQ 
Sbjct: 71  VRSLQPFRLTGGNKDYLVVGTDSGRITVLEYDTDTN-LFKKVHQETFGKSGCRRIVPGQY 129

Query: 121 GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQV---------LDIKF--- 168
              DP  R + +  ++    V  F+         +  LE  +          +D+ F   
Sbjct: 130 LAADPKGRAVMIGAFEKQKLVYIFNRDAAAHLTISSPLEAHKSHTIVYDTVGVDVGFDNP 189

Query: 169 LYGCAKPTIVVLYQD-NKDARHVKTYEVALKDKDFVEGPWSQNN---LDNGADLLIPVP- 223
           ++ C +     + +D   +AR   T  +   + D       +     LD  A+ L+ VP 
Sbjct: 190 IFACLEVDYEEVDEDPTGEARQFLTQSLTFYELDLGLNHVVRKESIPLDEFANKLVSVPG 249

Query: 224 ----PPLCGVLIIGEETIVYCSANAFKAI---------PIR----PSITKAYGRVDADGS 266
               P   GVL+     I + +    + +         P+R    P +T           
Sbjct: 250 GSDGP--GGVLVCSPGRITWRTYGEHEPVAINLPRRDDPLRTDRAPLVTAVTMHKTKRMF 307

Query: 267 RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
            +L+    G L  L +  EK +V+GL I+      +A+ +  L N ++++ + YG+  L 
Sbjct: 308 FFLVQTEEGDLFKLTMVAEKGEVSGLIIKYFDTVPVANAMCLLRNGLLFVAAEYGNHHLY 367

Query: 327 K-------------LNLQPDAKGSY--------VEVLERYVNLGPIVDFCVVDLERQGQG 365
           +             L++ P  K  Y        + +++   +L P++   + DL  +   
Sbjct: 368 QIASLGDNEDEPSYLSIDPLDKIHYFRPRDLLNLALVDDQESLHPMIACQLADLHEEETP 427

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISE 424
           Q+    G     S R++R+G+ ++E A  EL G    +WS++   DD  DT+LV+SF+ +
Sbjct: 428 QLYALCGRGAKSSFRVLRHGLEVSEVAVSELPGNPSAVWSVKRHVDDESDTYLVLSFVDK 487

Query: 425 TRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
           T +L +   + +EE +  GF  +  TL       + L+QV  G +R +    R    EWK
Sbjct: 488 TLVLGIG--ETVEEVKDSGFLEEVPTLSASRIGDDSLLQVYPGGIRHIRFDQR--VKEWK 543

Query: 485 SPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGE 542
           +P   ++     N  QV++      LVY E+   G L E  +  ++  +++ + + P+ E
Sbjct: 544 APGSTAITNCAVNERQVVITLSSNELVYFELDRAGQLNEYTERIEMTSKVTAMALAPVAE 603

Query: 543 NPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFE-------- 591
           +   SQ  A+G+  D +VR+ SL     L  +  + L G   P S  LC  E        
Sbjct: 604 DAFTSQFLALGL-EDNTVRVLSLDPSSCLQPLRMQALPGA--PSS--LCIIEIAGQAGEP 658

Query: 592 GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 651
           G   L   L +G +    ++  TG+L+D +   LG + + L    +     V A S RP 
Sbjct: 659 GTLQLHIGLANGVVSRSTMDKVTGDLSDSRTRYLGVREVRLFPVRAHGHPAVLALSTRPW 718

Query: 652 VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRS-IP 710
           + ++   +   + ++ + + +   F S   P+ +    +  L I ++ ++  +  +S IP
Sbjct: 719 IAFTYQGQPRMAPLSYEALEYAHMFCSEQLPEGIVAVAKNTLRILSLQNLGSIFNQSTIP 778

Query: 711 LGEHPRRICHQEQS 724
           L   PR+    E++
Sbjct: 779 LAYTPRKFFLDEKT 792



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 44/306 (14%)

Query: 805  VFIVEDG-----KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
            +F   DG     KL  +   E +    +L  F G+L+A +   +++Y     D G ++L 
Sbjct: 939  LFSAPDGSARLTKLDFVHRTEVEAMPCALTPFAGRLIAGVGNIVRIY-----DMGRKKLL 993

Query: 860  SEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
             +C   H     + ++  G  +VV D  +S+  L YK  E  +     D    W +A+ +
Sbjct: 994  RKCENKHLPSRVVDIEVMGTRVVVADQRESVFFLKYKPTENVLSVFCDDTTPRWCTAMLM 1053

Query: 919  LDDDIYLGAENNFNLFTVRKNSEGATDE------------ERG-------RLEVVGEYHL 959
            +D      A + F   +V +  +  TD              RG       +L  V  +++
Sbjct: 1054 VDYSTVCVA-DKFGNVSVLRCPDDVTDTLQEDPSGAKAFWARGYLNGAPQKLVQVANFYI 1112

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRK 1018
            GE V      +L    P         + + T++G IG +    H E   F + L+ +LR+
Sbjct: 1113 GEIVQSLHKTTLT---PSG----TECIAYTTLSGSIGALMPFSHKEDAEFFQTLELHLRQ 1165

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
                + G +H  +RS       V  K+ +DGDL E +  LS +   +I+  +  + +E+ 
Sbjct: 1166 EHPPICGRDHLAFRS-----AYVPCKSVIDGDLCEEYNMLSASLKSDIADGLERTPQEVA 1220

Query: 1079 KRVEEL 1084
            K++EE 
Sbjct: 1221 KKLEEF 1226


>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
 gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
          Length = 1181

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 250/1237 (20%), Positives = 488/1237 (39%), Gaps = 217/1237 (17%)

Query: 3    IWNYVVTAHKPTNVTHSCVGNFTS-PQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIY 59
            ++ Y +T    + +  +  G+F   P++  + IA+   +++    P+   +  +     +
Sbjct: 1    MYLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHVLCSHNAF 60

Query: 60   GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNG 118
            G I +L  FR  G ++D++ I ++  +  +L+++A+      R   +   + G R    G
Sbjct: 61   GIIRSLLAFRLTGGSKDYIVIGSDAGRIVILEYNAQKV-CFERVHQETFGKTGCRRIVPG 119

Query: 119  QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
            Q   +DP  R  LIG      L  ++  D    L  +  +   +   +    +    G  
Sbjct: 120  QFLAVDPKGRAILIGAVERQKLVYIMNRDASANLTISSPLEAHKSHCICYSVVGVDVGFE 179

Query: 174  KPTIVVLYQDNKDARHVKTYEVALK--------DKDFV----EGPWS----------QNN 211
             PT   L  D ++  H  T  +A K        + D V    +GP              N
Sbjct: 180  NPTFACLEVDYEEVDHDPTGHLATKIPQTLTFYELDLVPGGQDGPSGVIVCCENYLVYKN 239

Query: 212  LDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLG 271
            L +  D+  PVP     +       I+ CSA     +                   +L+ 
Sbjct: 240  LGDQPDIKCPVPRRRNELDDCDRTVIIVCSATHKTKLMYF----------------FLVQ 283

Query: 272  DHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL--- 328
               G +  + +  E + VT LKI+      +++ +  L    ++  S +G+  L ++   
Sbjct: 284  TDQGDIFKVTLESEHDIVTELKIKYFDTIPVSNAMCILKTGFLFTASEFGNHHLYQIAHL 343

Query: 329  -----------NLQPDAKGSY---------VEVLERYVNLGPIVDFCV---VDLERQGQG 365
                        +Q +   ++         + ++++  +L P++ F          Q   
Sbjct: 344  GDEDDEPEFSSRMQLEEGETFFFAPRGLTNLAIVDQMDSLSPLIFFPTRTRCTFSSQSIA 403

Query: 366  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
            Q       +   +  ++ N +                W+++ + DD FD+ +VVSF++ T
Sbjct: 404  QWFGGKRKWLSLNCLVIPNAV----------------WTVKRNIDDKFDSHIVVSFVNAT 447

Query: 426  RILAMNLEDELEETEIEGFCSQTQTLFC----HDAIYNQLVQVTSGSVRLVSSTSRELRN 481
             +L++   + +EE    GF   T TL C     DA+  + V    G +  + S  R L N
Sbjct: 448  LVLSIG--ETVEEVTDSGFLGTTPTLGCALIGDDALCIRTVFDILGLIGELMS-GRHLVN 504

Query: 482  EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINP 539
                     +     N  QV +A  GG LVY E+   G L E  +  +L  ++ C+ ++ 
Sbjct: 505  -------VQLLKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVLCMSLSE 557

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSL------PDLNLITKEHLGGEIIPRSVLLCAFEGI 593
            I E    S+   VG+  D +VRI SL        L LI+         P S+++    G 
Sbjct: 558  IPEGELRSRFLTVGL-ADKTVRIISLDPQDCLSPLQLISFSMQALPSEPESIIVLEMFGT 616

Query: 594  S-------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 646
                    +L   L +G LL   ++  TGELTD +   LGT+ + L     ++   + AA
Sbjct: 617  ETQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFRVRIQSKDAIMAA 676

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 706
            S R  ++Y    +   + ++   +     F+S   P+ +    E  L I +++ +  +  
Sbjct: 677  SSRAWLLYDYQSRFHLTPLSYAALEFAAGFSSEQCPEGIVAIAENTLRILSLEKLGAVFN 736

Query: 707  RSI-PLGEHPRR-ICHQ---------------------EQSRTFAICSLKNQSCAEESEM 743
              + PL   PRR + H+                     E+ +  A   ++    AEE++ 
Sbjct: 737  HVVHPLDYTPRRMVVHKASGNLIIIENDHAAFTVKGKMERRKQLADELMEVAKEAEEADQ 796

Query: 744  HFV-------------------------------RLLDDQTFEFISTYPLDTFEYGCSIL 772
              V                               R++     E +S +P    E   +I 
Sbjct: 797  QAVKEMADAIRTEKVDERVYGSPKNQKGKWASTVRIMRSNDGETLSHFPFAEDEAAFAIA 856

Query: 773  SCSFSDDSNVYYC-VGTAYVLP-EENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSL 828
               F + S+  +  VG    L  +  +   G I  F++      LQL+    T   V ++
Sbjct: 857  MVQFQNQSDTQFVLVGCGCDLQLKPRKANGGCIYTFLLAANGTTLQLLHRTPTDEVVNAI 916

Query: 829  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLMK 887
            + F G  LA + +K++LY     D G R+L ++C +       + +++ G  IVV D  +
Sbjct: 917  HDFRGMALAGVGKKVRLY-----DLGKRKLLAKCENRQIPTQVVDIRSMGQRIVVSDSQE 971

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE- 946
            S+  + YK ++G +     + +  +++ V +LD D  +   + F    V +  +G T+E 
Sbjct: 972  SVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDYDT-VAVGDRFGNVAVLRLPKGVTEEV 1030

Query: 947  -----------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
                       +RG       +LE +   ++G+ +   +  SLV        G    + +
Sbjct: 1031 QEDPTGVRALWDRGNLNGASQKLEAIAHLYIGDAITSMQKTSLV-------PGANDCLSY 1083

Query: 989  GTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
             T++G+IG++   +  +++ F + L+ ++R     + G +H  +RS+    K+V     +
Sbjct: 1084 TTISGIIGILVPFMSRDEFEFFQNLEMHMRVEYPPLCGRDHLAYRSYYFPVKSV-----I 1138

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E +  +   +   + + +     E+ K++E++
Sbjct: 1139 DGDLCEQYSLMPLDKQKSVGEELGRKPTEIHKKLEDI 1175


>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1227

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 193/829 (23%), Positives = 335/829 (40%), Gaps = 99/829 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEI--------HLLTPQG----L 50
           ++ Y +T  + T    + +G+F+         A  +  EI         LL P      L
Sbjct: 1   MYLYSLTLQRATGAVCAVIGSFSGRDSKKSNAAGSSTQEIAVARGGTLDLLRPDPETGRL 60

Query: 51  QPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDR 110
           + +L V ++G I +L  FR  G  +D+L + ++  +  +L++  + +             
Sbjct: 61  RTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRFDKVHQETFGKS 120

Query: 111 IGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE---------L 161
             R    GQ+  +DP  R + +   +    V   +     +   +  LE          L
Sbjct: 121 GCRRIVPGQLLSVDPKGRALCIAALEKQKLVYVLNRDASARLTISSPLEAHKSHTLTFAL 180

Query: 162 QVLDIKF---LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNN------- 211
             LD  F   ++G     I + Y D+      +    A K   F E     N+       
Sbjct: 181 TALDCGFDNPVFG----AIELEYGDSDRDPTGQAASHAQKLLTFYELDLGLNHVSRKVSE 236

Query: 212 -LDNGADLLIPVPPPL---CGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGR--VD 262
            +DNGA++L+ VP       G+L+  +  ++Y +         IP R  +    G   V 
Sbjct: 237 PIDNGANMLVTVPGGADGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRVDLPAERGVLIVA 296

Query: 263 ADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYI 316
           A   R      +LL    G +  + + H  + V+ L+I+      +AS I  L +  ++ 
Sbjct: 297 AATHRQKSLFFFLLQTEYGDIFKVDLDHHGDTVSELRIKYFDTIPVASAICVLRSGFLFA 356

Query: 317 GSSYGDSQLIKLN--------------------------LQPDAKGSYVEVLERYVNLGP 350
            S +G+  L +                             QP A  + V + E   +L P
Sbjct: 357 ASEFGNHALYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDE-IESLMP 415

Query: 351 IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSST 409
           I+D  + +L  +   QV T  G     +LRI+R G+ I+E A   L      +W+++ + 
Sbjct: 416 IMDMRIANLFDEETPQVYTACGRGSRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNI 475

Query: 410 DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
           +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV    +
Sbjct: 476 NDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSHFLDTTHSLAVSLLGEDSLMQVHPNGI 533

Query: 470 RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQL 528
           R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+   +
Sbjct: 534 RHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDM 591

Query: 529 EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLL 587
             +++CL I P+ E    S+  AVG + D ++RI S  PD  L           P S+L 
Sbjct: 592 SGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSFDPDDCLQPLSVQSVSSAPESLLF 650

Query: 588 CAFE-------GISY-----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
              +       G  Y     L   L +G L    ++M TG+L+D +   LG +P  L   
Sbjct: 651 LEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPC 710

Query: 636 SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
              +   +   S RP + Y      L + ++   +     F+S    + +       L I
Sbjct: 711 IVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRI 770

Query: 696 GTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 742
            TI+ + +  +  SIPL   PR+     + +  A+  S K    AE+ E
Sbjct: 771 FTIERLGETFNETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQRE 819



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 160/364 (43%), Gaps = 42/364 (11%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 801
            +R+LD ++ +      L   E   SI + +F D +      VGT   L   P+ +  +  
Sbjct: 876  IRILDPRSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGF 935

Query: 802  -RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 860
              I  F+ E   L+L+ + + +    SL  F G+LLA +   ++LY     D G R+L  
Sbjct: 936  IHIYKFVNEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLY-----DLGKRKLLR 990

Query: 861  ECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
            +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   +
Sbjct: 991  KCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 1050

Query: 920  DDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGE 961
            D D   GA+   N++  R                  K  +G  +    ++E + ++H+G+
Sbjct: 1051 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGD 1110

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVI 1020
             V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+  
Sbjct: 1111 VVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQEH 1163

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              + G +H  +RS          K+ +DGDL E +  L      +I+  ++ +  E+ K+
Sbjct: 1164 PPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEILKK 1218

Query: 1081 VEEL 1084
            +E++
Sbjct: 1219 LEDI 1222


>gi|341886300|gb|EGT42235.1| hypothetical protein CAEBREN_28831 [Caenorhabditis brenneri]
          Length = 1005

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 180/790 (22%), Positives = 336/790 (42%), Gaps = 89/790 (11%)

Query: 6   YVVTAHKPTNVTHSCVGNFTS-PQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRI 62
           Y +T    T +  +  GNF+  P+   +++ + + +E+  L      ++ M    I+G +
Sbjct: 4   YNLTLQGQTAINQAVQGNFSGVPKAQEIVVGRGSALELLTLDTLTGKIKVMCHQDIFGIV 63

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQ 119
            +L  FR     +DF+ + ++  +  +LQ++A+ +    L     G    R   P   G 
Sbjct: 64  RSLLAFRLTAGTRDFIAVGSDSGRIVILQYNADKTCFERLHQETFGKTGCRRIVP---GH 120

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               DP  R  +IG      L  ++  D +  L  +  +   +   L    +    G   
Sbjct: 121 YLAGDPRGRALMIGAVERQKLVYIMNRDAEAHLTISSPLEAHKQHTLCYAMVGVDVGFEN 180

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
           PT   L  D +DA +  T E A + +    F E     N+        L +  +LLI VP
Sbjct: 181 PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLTDPGNLLIAVP 240

Query: 224 ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                  GV++  E  +VY   N      IR  I +    +D D  R             
Sbjct: 241 GGNDGPSGVIVCCENYLVY--KNLGDQPDIRCPIPRRRNELD-DADRTMLIIATATHKTK 297

Query: 268 ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
               +L+    G +  + +  +++ VT +K++       A+ +  L +  +++ + +G+ 
Sbjct: 298 NMFFFLVQAENGDVFKVTLETDEDLVTEMKLKYFDTVPPANAMCILKSGFLFVAAEFGNH 357

Query: 324 QLIKLN-----------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
           +L ++                         +P    S + + +   +L P+ D  + D+ 
Sbjct: 358 ELYQIASLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPI-DSMDSLSPLTDAVIGDVA 416

Query: 361 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
           R+   Q+ T  G     +L+++RNG+ I+E A  +L G    +W+++ + +D +D+++VV
Sbjct: 417 REDAAQLYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVV 476

Query: 420 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
           SF++ T  LA+ + D +EE    GF   T T+ C     + LVQ+ +  +R + +  R  
Sbjct: 477 SFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIRADKR-- 532

Query: 480 RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQL-EYEISCLDI 537
            NEWK+PP   +     N  QV +A  GG LVY E+  +G L E    +L   +I+C+  
Sbjct: 533 INEWKAPPRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTF 592

Query: 538 NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF-----E 591
           + I E    S+  A+G   D +VRI SL P+  L+          P S+LL        +
Sbjct: 593 SEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTPNDDGK 651

Query: 592 GIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
           G++  +L   L +G L    ++  TG + D +   LGT+P+ L     +  + +   S R
Sbjct: 652 GVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSAILCTSSR 711

Query: 650 PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ-KLHIRS 708
             ++Y   ++   + ++   + +   F S    + +       L I   + +    +++S
Sbjct: 712 SWLLYHFQRRFHLTPLSYVNLEYAASFCSNQCAEGIVAISSSTLRIIAAEKLGVAFNVQS 771

Query: 709 IPLGEHPRRI 718
                 PRRI
Sbjct: 772 FEQKMTPRRI 781


>gi|341886293|gb|EGT42228.1| CBN-TEG-4 protein [Caenorhabditis brenneri]
          Length = 1006

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 176/748 (23%), Positives = 322/748 (43%), Gaps = 91/748 (12%)

Query: 6   YVVTAHKPTNVTHSCVGNFTS-PQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRI 62
           Y +T    T +  +  GNF+  P+   +++ + + +E+  L      ++ M    I+G +
Sbjct: 4   YNLTLQGQTAINQAVQGNFSGVPKAQEIVVGRGSALELLTLDTLTGKIKVMCHQDIFGIV 63

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQ 119
            +L  FR     +DF+ + ++  +  +LQ++A+ +    L     G    R   P   G 
Sbjct: 64  RSLLAFRLTAGTRDFIAVGSDSGRIVILQYNADKTCFERLHQETFGKTGCRRIVP---GH 120

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               DP  R  +IG      L  ++  D +  L  +  +   +   L    +    G   
Sbjct: 121 YLAGDPRGRALMIGAVERQKLVYIMNRDAEAHLTISSPLEAHKQHTLCYAMVGVDVGFEN 180

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
           PT   L  D +DA +  T E A + +    F E     N+        L +  +LLI VP
Sbjct: 181 PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLTDPGNLLIAVP 240

Query: 224 ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                  GV++  E  +VY   N      IR  I +    +D D  R             
Sbjct: 241 GGNDGPSGVIVCCENYLVY--KNLGDQPDIRCPIPRRRNELD-DADRTMLIIATATHKTK 297

Query: 268 ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
               +L+    G +  + +  +++ VT +K++       A+ +  L +  +++ + +G+ 
Sbjct: 298 NMFFFLVQAENGDVFKVTLETDEDLVTEMKLKYFDTVPPANAMCILKSGFLFVAAEFGNH 357

Query: 324 QLIKLN-----------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
           +L ++                         +P    S + + +   +L P+ D  + D+ 
Sbjct: 358 ELYQIASLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPI-DSMDSLSPLTDAVIGDVA 416

Query: 361 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
           R+   Q+ T  G     +L+++RNG+ I+E A  +L G    +W+++ + +D +D+++VV
Sbjct: 417 REDAAQLYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVV 476

Query: 420 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
           SF++ T  LA+ + D +EE    GF   T T+ C     + LVQ+ +  +R + +  R  
Sbjct: 477 SFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIRADKR-- 532

Query: 480 RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQL-EYEISCLDI 537
            NEWK+PP   +     N  QV +A  GG LVY E+  +G L E    +L   +I+C+  
Sbjct: 533 INEWKAPPRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTF 592

Query: 538 NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF-----E 591
           + I E    S+  A+G   D +VRI SL P+  L+          P S+LL        +
Sbjct: 593 SEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTPNDDGK 651

Query: 592 GIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
           G++  +L   L +G L    ++  TG + D +   LGT+P+ L     +  + +   S R
Sbjct: 652 GVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSAILCTSSR 711

Query: 650 PTVIYSSNKKL---LYSNVNLKEVSHMC 674
             ++Y   ++      S VNL+  +  C
Sbjct: 712 SWLLYHFQRRFHLTPLSYVNLEYAASFC 739


>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
 gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
 gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
          Length = 1179

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 203/797 (25%), Positives = 352/797 (44%), Gaps = 86/797 (10%)

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLR 406
            L PI D     L  Q + Q+V  SG     SL+++++ + INE AS EL G    +++ +
Sbjct: 409  LNPITD----GLLDQEKSQLVLTSGGSSRSSLKLLKHELAINELASSELPGSALNIFTTK 464

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 466
             S  D +D ++V+SFI  T +L++   + ++E    G   Q  T+       N L QV S
Sbjct: 465  VSHKDQYDKYMVISFIDGTLVLSIG--ESVDEVSDSGLELQVSTIAVQQVGRNSLAQVHS 522

Query: 467  -GSVRL--VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILT 521
             G V L  ++  S E ++ W+ P G  + VA+   SQ+ L      LVY EI   D ++ 
Sbjct: 523  HGIVHLKGLNEPSFE-KSLWQPPVGAEILVASMTNSQIALGLSNRELVYFEIDEYDQLIE 581

Query: 522  EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGG 578
              +  ++   IS L +  I +    S   AVG   D++++I S  P+  L +++ + L  
Sbjct: 582  HKERKEMSGRISALSLGQIPDGRLRSPFLAVG-CNDMTIKILSTDPNSCLEVLSLQALSS 640

Query: 579  EIIPRSVLLCAFE-GISYLL-CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
              IP  + +   E G  Y +   L  G  +  LLN  +G+L+D +   LG + ++L    
Sbjct: 641  --IPSDLQITNLEQGAGYFVHIGLDSGIYIRTLLNRISGQLSDTRVNYLGPKRVSLSPVK 698

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE-LTI 695
                  V A SD   + Y+S      + +   + ++ C F S   P++  +    E LTI
Sbjct: 699  IFGKNLVLAFSDTSYLSYNSGFDAKITPLCDGKFTYGCGFISEECPENGVVGVSAENLTI 758

Query: 696  GTIDDIQK-LHIRSIPLGEHPRRIC-----------HQEQSRTFAICSLKNQSCAE---- 739
             TID +   ++++ IPL   PRRI             Q  ++   + S+  +   E    
Sbjct: 759  FTIDQLDTDMNVKDIPLTFTPRRITLVSEDVVVVTESQHYTKNPYLNSVATEESRELYQQ 818

Query: 740  ---ESEMHF---VRLLDDQTFEFISTYPLDT--FEYGCSILSCSFSDDSNVYYCVGTAY- 790
               E   H+   +  +D Q+ + I    LD     +G + +S +   D  VY+ V  +  
Sbjct: 819  IGYEKSSHWSSVIETVDIQSQQVIQAINLDKELAIFGSTKVSFASHPD-EVYFIVSCSVE 877

Query: 791  --VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 848
              +LP  N+ T+ R    I E+G LQ +   ET   VYSL  F GKLLA +   + LY  
Sbjct: 878  QELLPNINKGTQLRTYK-ITEEG-LQFLHSTETDQLVYSLTEFQGKLLAGVGNLLVLYDL 935

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
             L+    + L     H        +  +G  IV+ D+ +S   L +  EE        D 
Sbjct: 936  GLKKLLKKSLTQTSFHQ----ITSIDYQGFRIVISDMKQSSMFLSFNAEENRFISLCDDI 991

Query: 909  NANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGE--------- 956
                ++  ++LD    +  +    +  +R   K ++   D    + +++GE         
Sbjct: 992  TQRHITCSKMLDYSTVVTGDRFGTISVLRCPEKVNKDHLDYIEAKSKMIGECPFKLKQLA 1051

Query: 957  -YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL--PHEQYLFL---E 1010
             Y++ + V     GSL        VG   ++I+  + G IG+++ +  P +   F+   +
Sbjct: 1052 SYYVQDVVTSLSRGSLT-------VGGKQSIIYTGLQGTIGILSPIQTPSDIDFFVSLED 1104

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             L+  L K    + G +H ++R +      V A+  +DGDLI+ F  L  +    IS  +
Sbjct: 1105 SLRQELLKSKHLLTGRSHLKYRGY-----YVPAQGVVDGDLIQYFYQLPDSTKQFISTKL 1159

Query: 1071 NVSVEELCKRVEELTRL 1087
            + S  E+ +++  +  L
Sbjct: 1160 DRSTLEIERKISIMRSL 1176


>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
           yoelii]
          Length = 1235

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 171/751 (22%), Positives = 319/751 (42%), Gaps = 82/751 (10%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T +  GNF+ P+   +++AK   +E+     QG L  ++   ++G I +
Sbjct: 5   YHLTLQKPTAITRTVYGNFSGPKAHEIVVAKGQVLELLRADKQGKLNVIVSKDVFGIIRS 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           LE+FR  G  +D++ I ++  +  +L++D E ++ I R   +   + G R    G+   I
Sbjct: 65  LEIFRLLGSNKDYIAIGSDSGRLVILKYDDEKNDFI-RVHCETYGKSGIRRIIPGEYIAI 123

Query: 124 DPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKPTIV 178
           DP  R + L   +      ++  DNK  L  +  +   +   +    +    G   P  V
Sbjct: 124 DPKGRALMLCAIEKQKFVYILNRDNKENLTISSPLEAHKSHSICHAVVALNVGFENPMFV 183

Query: 179 VLYQ--DNKDARHVKTYEVAL----KDKDFVEGPWSQNN--------LDNGADLLIPVP- 223
            + Q  +N D + +   E  +    K   F E     N+        +D  A LLIP+P 
Sbjct: 184 SIEQNYENLDKQVLNANEQIMEYPKKGLCFWEMDLGLNHVIKKHTIPIDITAHLLIPLPG 243

Query: 224 --PPLCGVLIIGEETIVYCSAN---AFKAIPIR------PSITKAYGRVDADGSRY--LL 270
                 G+++  E  +VY   +    F + P R       +I+     +    + +  L+
Sbjct: 244 GQQGPSGLIVCCENYLVYKKIDHDDIFCSYPRRLEVGEEKNISIVCWTIHRIKTFFFILI 303

Query: 271 GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN- 329
               G L+ + + HE   V  +  +      IA++I  L +  +++ + +G+    + + 
Sbjct: 304 QSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQFSG 363

Query: 330 ------------LQPDAKGSYVE----------VLERYVNLGPIVDFCVVDLERQGQGQV 367
                         P  K + +           ++++  +L PIVD  ++D +     Q+
Sbjct: 364 IGNDSNDAMCTSNHPSGKNAIIAFKTQKLKNLYLVDQIYSLSPIVDMKILDAKNSNLPQI 423

Query: 368 VTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETR 426
               G     SLRI+++G+ I E A+ EL G  + +W+++      +D +++VSF   T 
Sbjct: 424 YALCGRGPRSSLRILQHGLSIEELANNELPGKPRYIWTVKKDNSSEYDGYIIVSFEGNTL 483

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 486
           IL +   + +EE       +   T+  +    N  +QV    +R ++    ++  EW  P
Sbjct: 484 ILEIG--ETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHING---KIVQEWIPP 538

Query: 487 PGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEYEISCLDINPIGENPS 545
               +N AT+N SQ++++  GG L+Y EI +   LTE+    +  EI CL I  I +N  
Sbjct: 539 KNKQINAATSNGSQIVVSLSGGELIYFEIDESHTLTEIFRKNINVEILCLSIQQIQQNKL 598

Query: 546 YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL---LCAFE----------G 592
            +   AVG   ++ VR+ S+        + L   I+P +     +C  E           
Sbjct: 599 RASFLAVGCLDNV-VRLLSIEKDQYF--KQLSTYILPNNSSPQDICISEMKELGNQKEHT 655

Query: 593 ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
           I YL   L  G LL  +++   G L++     LG + + +          +   S++  +
Sbjct: 656 ILYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTYL 715

Query: 653 IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683
            Y    K +YS +N   + +   F S    D
Sbjct: 716 CYVYQGKYIYSPLNYDVLEYASSFYSEQCSD 746



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/376 (20%), Positives = 154/376 (40%), Gaps = 57/376 (15%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG-RIL 804
            +++++    + I    L+  E   S+ +C       +     T   L   N P+   R+ 
Sbjct: 875  IKIINPINLQIIDKISLELEEAALSVCACELEALHCLIVGTTTNMTLKNRNVPSASLRVY 934

Query: 805  VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
             + + + KL L+     +   Y    FNG+++ ++  K+++Y       G ++L  +C +
Sbjct: 935  TYDI-NYKLNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYAL-----GKKKLLKKCEY 988

Query: 865  HGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                 A+  ++  GD I   D+ +S+ +  Y   +  I   + D    W++  EILD   
Sbjct: 989  KDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEILDHHT 1048

Query: 924  YLGAENNFNLFTVRKN-------------SEGATDEERG-------------------RL 951
             + A+   ++F +R +              E A  EE G                   ++
Sbjct: 1049 IIAADKFDSVFILRVSLLTFFITPFCHLVPEEAKQEEYGIANKCWYGGEVINSSTKNRKM 1108

Query: 952  EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH---EQYLF 1008
            E +  +H+GE V   +   L    P S       +I+ T+ G IG  A +P+   E+   
Sbjct: 1109 EHIMSFHIGEIVTSLQKVKLS---PTSS----ECIIYSTIMGTIG--AFIPYDSKEELEL 1159

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 1068
             + L+  LR     + G  H  +RS+ +  + V     +DGDL E F  L      +I  
Sbjct: 1160 TQHLEIILRTEKHSLCGREHIFFRSYYHPVQHV-----IDGDLCEQFSSLPFEVQRKIGS 1214

Query: 1069 TMNVSVEELCKRVEEL 1084
             +  + +E+ +++E++
Sbjct: 1215 DLEKTPDEILRKLEDI 1230


>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus heterostrophus
            C5]
          Length = 1235

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 269/1224 (21%), Positives = 470/1224 (38%), Gaps = 180/1224 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT--PQGLQPMLDVPIYGRIA 63
            Y +T  +PT    +  G+F    +  ++ A  +R+ I  ++   +G Q +    ++G I 
Sbjct: 4    YALTVKQPTATQDAISGDFLGNGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFGIIR 63

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             +  FR  G  +D + I T+  +    ++  +     T           R    G+    
Sbjct: 64   RIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEHTFKTLHFETFGKSGIRRVVPGEYLAA 123

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-----LQVLDIKFLYGCAKP--- 175
            DP  R I +   +    V      GQ   A +  LE      L    I    G   P   
Sbjct: 124  DPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNPMFA 183

Query: 176  TIVVLYQDNKDARHVKTYEVALKDKDFVE---------GPWSQNNLDNGADLLIPVP--- 223
            T+ V Y +++     + YE   K+  + E           WS+  +D  A+ L  VP   
Sbjct: 184  TLEVDYSNSETDPTGEAYEEIKKELVYYELDLGLNHIVRKWSEP-VDRTANTLFRVPGGP 242

Query: 224  PPLCGVLIIGEETIVY------CSANAFKAIPIRPSITKAYGR-----------VDADGS 266
                GVL  GE++I Y       S+    AIP R   T+   R           +     
Sbjct: 243  SAPSGVLCCGEDSITYRRIFNNKSSVRRLAIPRREGATEDPNRKRMIVAGTLYSLKGGDF 302

Query: 267  RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             YLL    G +  L +      V  +KI+      + ++I  L    VY     GD  L 
Sbjct: 303  FYLLQTEDGDVFKLTVDAPNGTVENIKIKYFDTIPVTTSICILRAGFVYAACESGDRILY 362

Query: 327  KL---------------NLQPDAKGSY------------VEVLERYVNLGPIVDFCVVDL 359
            +L                   D + S+            +  +E   +L PI+D  V + 
Sbjct: 363  ELESLGDETDDPVFESSQFPVDPEASFAPPFFRPRALVNLTAVEAMPSLNPIMDMEVANP 422

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLV 418
              +   Q+ T +G     S R  RN + + +     L Q    +W+ + +++D  DT +V
Sbjct: 423  ALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDETDTLIV 482

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV------ 472
            +     +R L + + D++EE    GF   T TL       + ++Q+    +R +      
Sbjct: 483  LCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQFP 540

Query: 473  ---SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA-Q 527
               +S +     +W+ P   ++     N  QV +A   G ++Y E   DG L   +    
Sbjct: 541  NDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEIV 600

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDL--NLITKEHLGGEIIPRS 584
            L+  I+CL +  + E    +   AVG  +D +VRI++L PD+  N++    +     P S
Sbjct: 601  LDSTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIYNLSPDMEGNILRSISVQALTSPPS 659

Query: 585  VLLC------AFEGIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
             L        +  G S +L   L  G  +  +L+  TG++ D ++  LG +PI     + 
Sbjct: 660  DLTVNLMTDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTV 719

Query: 638  KNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
                 + A + RP + Y+  +   L  + +N         F+ + F   + ++   EL I
Sbjct: 720  AGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNFDGSQFKGIICVSAN-ELRI 778

Query: 696  GTIDDI-QKLHIRSIPL--------GEHPRRICHQEQSRTFAICSLKNQSC--------- 737
             T +D+       SIPL        G H + + +  QS    I + + Q           
Sbjct: 779  FTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNNTISADRRQQLIAQSGGKKE 838

Query: 738  ------------------------------AEESEMHFVRLLDDQTFEFISTYPLDTFEY 767
                                          A+ S    ++++D  T E   T+ ++    
Sbjct: 839  DGTNGSMETEQSNGATDSDEFPAVDFGYPRAQGSWASCIQVVDPVT-EKAVTHTIE-LNG 896

Query: 768  GCSILSCSF----SDDSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKE 820
              S++S +     S +   +  VGTA  L   P +      +I        +L+   E  
Sbjct: 897  NISLVSAALVFFESRNDEAFLAVGTAKDLSFTPYKFSSASIQIYKINPTGRELEFFHETT 956

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 880
                  +L AF GKLLA I + + LY   ++    R+ Q+       I  L  +T+G  +
Sbjct: 957  VSDPPLALLAFKGKLLAGIGRHLCLYDCGMKS-VLRKAQAPNCVPTRITGL--KTQGSRL 1013

Query: 881  VVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR- 937
            VV D  +S++ +++K +     +     D  A   +A E+LD D  +G +   N++ VR 
Sbjct: 1014 VVSDQAQSVTYVVHKDQVHPNRLIPFVDDTVARHTTASEMLDYDTTVGGDKFGNIWLVRC 1073

Query: 938  --KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQIP 984
              K SE + +   G   +V + +LG   NR     L+     +D+           G   
Sbjct: 1074 PQKVSESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYFTNDIPVSIQKTVLLSGGER 1130

Query: 985  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
             V +  + G +G +        +   ++L+  LR   K + G +H  +RS+    K+V  
Sbjct: 1131 VVFWAGLQGTLGALIPFNSRRSHKMFQQLELQLRSDDKPLSGRDHLAFRSYFAPVKSV-- 1188

Query: 1044 KNFLDGDLIESFLDLSRTRMDEIS 1067
               +DGDLIE FL L R + + I+
Sbjct: 1189 ---IDGDLIERFLVLPRDKRESIA 1209


>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
          Length = 1273

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 184/793 (23%), Positives = 320/793 (40%), Gaps = 114/793 (14%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIYGRI 62
           Y VT  +P     +  GNF++P+   +I +K T IE  LL P     L+ +     +G I
Sbjct: 4   YNVTLQRPGACQTAINGNFSAPKVQEIIASKGTAIE--LLRPDQHGKLKSIAFRECFGII 61

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI 122
            ++  FR  G  +D + I ++  +  VL++DAE ++              R    GQ   
Sbjct: 62  RSMAAFRLAGANKDHVVIGSDSGRIVVLRFDAEKNQFEQVHKETFGKSGVRRVVPGQFCC 121

Query: 123 IDPDCRLIGLHLYDGLFKVI---------------PFD-NKGQLKEAFNI-----RLEEL 161
           +DP  R + L   +   KV+               P + NKG+   AF++      LE  
Sbjct: 122 VDPKGRAVMLAALEKQ-KVVYVLNRDSQANLTISSPLEANKGKTI-AFDVCALDNGLENP 179

Query: 162 QVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
             + I+  YG A   +    +   +A+ + TY       + V   WS+  +DNGA+ LIP
Sbjct: 180 GFMAIELFYGEAD--VDDTGEAAAEAQKMLTYYELDLGLNHVARKWSEP-VDNGANKLIP 236

Query: 222 VP---PPLCGVLIIGEETIVYCSANAFK---AIPIRPSITKAYGRVDA--------DGSR 267
           VP       GV++  E  +VY +    +    IP R S+    G + A        +G  
Sbjct: 237 VPGGSDGPGGVIVCCENFLVYRAEKHEEIRCVIPRRTSLDAERGVLIASFASHRSKNGFF 296

Query: 268 YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           ++     G  + + +     KV+ LK++      + S +  L    ++ GS +G   L +
Sbjct: 297 FIAQSEYGDCYKVTLDWTNRKVSELKMKYFDTVPVCSALCVLKTGFLFCGSEFGAHALFQ 356

Query: 328 L-----------------------------------------NLQP----DAKGSYVEVL 342
                                                     N QP      K   + ++
Sbjct: 357 FIALGDDEESAESSSKTLKKIDNATKKKGRGKNDDEDDEEEDNFQPVFFNPRKLKNLALI 416

Query: 343 ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKG 401
           +   +L P +        ++   +++   G     + R++R G+ ++E A   L G   G
Sbjct: 417 DEIESLSPTIALASNISRKEETPRLLALCGQGPRSTFRVLRQGVPLSEMARSPLPGNPNG 476

Query: 402 MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH---DAIY 458
           ++++R S  D  D ++VVSF + T +L++   D +EE    G  + + TL      D   
Sbjct: 477 VFTIRKSKSDTTDAYIVVSFTNATLVLSIG--DTVEEVTDTGILATSSTLAVSALGDDDD 534

Query: 459 NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD- 517
             L+Q+    VR V   ++ + NEW++P    +     N  Q ++A  GG LVY E+ + 
Sbjct: 535 GSLIQIHPSGVRHVRGNNKGV-NEWRAPGRKKITACACNRGQAIVALTGGELVYFELDEA 593

Query: 518 GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 576
           G L E++  +   E+  +DI PI +    ++ AAV  + D +VR+ SL P   L T    
Sbjct: 594 GQLLEIEKIETSSEVVSVDIPPIPDGSLRAKFAAVAGY-DSTVRVLSLNPGEALRTVGVQ 652

Query: 577 GGEIIPRSVLLCAFEGIS--------------YLLCALGDGHLLNFLLNMKTGELTDRKK 622
                P SVLL      +              +L   L +G L+   ++  +G L+D + 
Sbjct: 653 ATPSPPESVLLLEVNNKTTKNKKAGSSAPPSMFLNVGLSNGILVRCEVDRVSGALSDARS 712

Query: 623 VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 682
             +G +P  L        +   A S RP + ++ N +        + +   C F S   P
Sbjct: 713 RFVGQRPPKLNRIEMNEESGFVALSTRPWLGFNENGRFSIVPACHETIDRACGFASEQVP 772

Query: 683 DSLAIAKEGELTI 695
           + +    +G L I
Sbjct: 773 EGIVAVVDGSLRI 785



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 122/301 (40%), Gaps = 46/301 (15%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSECGHHGHILA 870
            L+L+ E   +GA ++L  F GKLL  ++  ++LY     D G ++L  ++EC        
Sbjct: 985  LELVHETPCEGAPFALRNFEGKLLVGVDDVLRLY-----DFGKKKLLRKAECAQKFPSFI 1039

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHE---EGAIEERARDYNANWMSAVEILDDDIYLGA 927
              ++  GD   V D  +S   + Y  E   E ++   A D    +++++  LD D    +
Sbjct: 1040 NDIRCSGDRFFVTDACESAFFVKYVREDDQECSMHIFADDIAPRYVTSMLPLDRDTVAVS 1099

Query: 928  ENNFNLFTVRKNSE-----------------------GATDEERGRLEVVGEYHLGEFVN 964
            +   N   +R   +                       GA +    +L+   ++H+G+ + 
Sbjct: 1100 DKFGNFAALRLPKDVSDEIESDISGGKHAALTSSAALGALNGANNKLQACAQFHVGDVIC 1159

Query: 965  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGV 1023
                 +L         G    +++ T+ G +G        ++  F   L+ +LR     V
Sbjct: 1160 SLTKCAL-------QTGGSEVIVYATLGGALGAFVPFASKDEADFCTHLEMHLRIEAPPV 1212

Query: 1024 GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
             G  H  +RS          K  +DGDL E F  L       IS+ M+ +  E+ KR+E+
Sbjct: 1213 LGNEHGAFRS-----SYFPVKAVVDGDLCEQFGRLGADAQRRISEEMDRTPSEIVKRLEQ 1267

Query: 1084 L 1084
            +
Sbjct: 1268 I 1268


>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
 gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
           strain H]
          Length = 1276

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 167/763 (21%), Positives = 321/763 (42%), Gaps = 82/763 (10%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T    GNF+ P+   ++++K   +E+     QG L  ++   I+G I  
Sbjct: 5   YHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIVSKDIFGIIRC 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           L+ FR  G  +D++ I ++  +  +LQ+  E ++ + R   +   + G R    G+   +
Sbjct: 65  LQTFRLTGSNKDYVVIGSDSGRLVILQFSNEKNDFV-RVHCETYGKSGLRRIIPGEYIAV 123

Query: 124 DPDCRLIGLHLYD--GLFKVIPFDNKGQLKEAFNIRLEELQVL--DIKFL-YGCAKPTIV 178
           DP  R + +   +      ++  DNK QL  +  +   +   +  D+  +  G   P   
Sbjct: 124 DPKGRALMICAIERQKFVYILNRDNKEQLTISSPLDAHKSHTICHDVVGMDVGFENPMFA 183

Query: 179 VLYQDNK--DARHVKTYEVALKDKDFVEGPWSQN------------NLDNGADLLIPVP- 223
            + Q+ +  D +   T E+    +  +   W  +             +D  A LLIP+P 
Sbjct: 184 SIEQNYEMYDKQVTNTTEIDACTRKTLLCLWEMDLGLNHVIRKHTLPIDMSAHLLIPIPG 243

Query: 224 --PPLCGVLIIGEETIVYCSA---NAFKAIPIR------PSITKAYGRVDADGSRY--LL 270
                 GV++  +  +VY      + + A P R       +I+     V      +  L+
Sbjct: 244 GQQGPSGVIVCCDNYLVYKKVEHVDVYCAYPRRLETGQEKNISIVCSTVHRIRKFFFILI 303

Query: 271 GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG--------- 321
               G L+ + + H+   V  +  +      +A+ I  + +  +++ + +G         
Sbjct: 304 QSEYGDLYKIEMDHQDGVVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQFSG 363

Query: 322 ----DSQLIKLNLQPDAKGSYVE----------VLERYVNLGPIVDFCVVDLERQGQGQV 367
               D++ +  +  P  + + +           ++++  +L PI+D  ++D +     Q+
Sbjct: 364 IGDDDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKILDAKNANSPQI 423

Query: 368 VTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETR 426
               G     SLRI+++G+ I E A  EL G  K +W+++      +D +++VSF   T 
Sbjct: 424 YALCGRGPRSSLRILQHGLSIEELADNELPGRPKYIWTIKKDNASDYDGYIIVSFEGSTL 483

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 486
           IL +   + +EE       +   T+  +    N L+QV    +R ++    ++ NEW  P
Sbjct: 484 ILEIG--ETVEEVVDTLLLTNVTTIHVNILYDNSLIQVHDTGIRHING---KVINEWVPP 538

Query: 487 PGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEYEISCLDINPIGENPS 545
               V  AT+NA+Q++++  GG L+Y EI +   L E+    L  EI CL I  + EN  
Sbjct: 539 KNKQVKAATSNATQIVISLSGGELIYFEIDESHSLVEIFRKSLNVEILCLSIQEVEENKV 598

Query: 546 YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL---LCAFE----------G 592
            +   AVG   ++ VR+ S+       +  L   I+P +     +C  E           
Sbjct: 599 RANFLAVGCLDNV-VRLLSIEKEKYFNQ--LSTFILPNNSSAQDICISEMCELGNDKERK 655

Query: 593 ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
           + +L   L +G LL  +++  TG LT+     LG + + +     K    +    ++  +
Sbjct: 656 LLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNPALLVLCEKTYL 715

Query: 653 IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
            Y    K +YS +N   + +   F+S    D         L I
Sbjct: 716 CYVHQGKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRI 758



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 158/364 (43%), Gaps = 47/364 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENE-PTKGR 802
            ++++   + + I    L+  E   S+ +C         +C  VGT   L  +N   T   
Sbjct: 930  IKIIHPVSLQTIDKISLEMEEAALSVCACELE----ALHCLIVGTTTNLSLKNRTATTAA 985

Query: 803  ILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            + V+  + + KL L+     +   +  + FNG+LLA++  K+++Y       G ++L  +
Sbjct: 986  LRVYTYDINYKLNLLHITPVEDQPFCFSPFNGRLLASVGNKLRIYAL-----GKKKLLKK 1040

Query: 862  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            C +     A+  ++  GD I   D+ +S+ +  Y     A+   + D    W++  EILD
Sbjct: 1041 CEYKDIPEAIISIKVSGDRIFASDIRESVLVFFYDANMNALRLISDDIIPRWITCSEILD 1100

Query: 921  DDIYLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGE 961
                + A+   ++F +R   E A  EE G                   RLE +  +H+GE
Sbjct: 1101 HHTIMAADKFDSVFVLRVPEE-AKQEEYGISNKCWYGGEMMAGSNKNRRLEHIMNFHVGE 1159

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVI 1020
             V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR   
Sbjct: 1160 IVTSLQKVKLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEN 1212

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              + G  H  +RS+ +       ++ +DGDL E F  L      +++  +  + +++ ++
Sbjct: 1213 PPLCGREHIFFRSYYHP-----VQHVIDGDLCEQFSSLPYDIQRKVAADLERTPDDILRK 1267

Query: 1081 VEEL 1084
            +E++
Sbjct: 1268 LEDI 1271


>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
          Length = 1218

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 182/790 (23%), Positives = 333/790 (42%), Gaps = 91/790 (11%)

Query: 6   YVVTAHKPTNVTHSCVGNFTS-PQELNLIIAKCTRIEI-HLLTPQG-LQPMLDVPIYGRI 62
           Y +T    T +  +  GNF+  P+   +++ + + +E+  L T  G ++ M    I+G +
Sbjct: 4   YNLTLQGQTAINQAIQGNFSGLPKSQEIVVGRGSALELLQLDTVTGKIKVMCHQDIFG-V 62

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRIGRPTDNGQ 119
            +L  FR     +DF+ + ++  +  +LQ++ E +    L     G    R   P   G 
Sbjct: 63  RSLLAFRLTAGTRDFIAVGSDSGRIVILQYNPEKTCFERLHQETFGKTGCRRIVP---GH 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               DP  R  +IG      L  ++  D +  L  +  +   +   L    +    G   
Sbjct: 120 YLAGDPRGRALMIGAVERQKLVYIMNRDAEAHLTISSPLEAHKQHTLCYAMVGIDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
           PT   L  D +DA +  T E A + +    F E     N+        L +  +LLI VP
Sbjct: 180 PTFACLEFDYEDADNDPTGEAAKRTQQTLTFYELDLGLNHVVRKYAEPLTDPGNLLIAVP 239

Query: 224 ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------- 267
                  GV++  E  IVY   N      IR  I +    +D D  R             
Sbjct: 240 GGNEGPSGVIVCCENYIVY--KNLGDQPDIRCPIPRRRNELD-DADRTMLIIATATHKTK 296

Query: 268 ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
               +L+    G +  + +  +++ VT +K++       A+ +  L    +++ + +G+ 
Sbjct: 297 NMFFFLIQAENGDIFKVTLETDEDLVTEMKLKYFDTVPPANALCILKAGFLFVAAEFGNH 356

Query: 324 QLIKLN-----------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360
           +L ++                         +P    S + + +   +L P+ D  + D+ 
Sbjct: 357 ELYQIASLGEGGDDEFSSAMGFGENDAAFFEPHELRSLIPI-DSMDSLSPLTDAVIGDIA 415

Query: 361 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVV 419
           R+   Q+ T  G      ++++RNG+ I+E A  +L G    +W+++ + +D +D+++VV
Sbjct: 416 REDAAQLFTLVGRGARSHMKVLRNGLEISEMAVSDLPGNPNAVWTVKKNIEDQYDSYIVV 475

Query: 420 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
           SF++ T  L + + D +EE    GF   T T+ C     + LVQ+ S  +R + +  R  
Sbjct: 476 SFVNAT--LTLTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYSEGIRHIRADKR-- 531

Query: 480 RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQL-EYEISCLDI 537
            NEWK+PP   +     N  QV +A  GG LVY E+  +G L E    +L   +I+C+  
Sbjct: 532 INEWKAPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGTLNEFTERKLFNADIACMTF 591

Query: 538 NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF-----E 591
           + I E    S+  A+G   D +VRI SL P+  L+          P S+LL        +
Sbjct: 592 SEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQNLPCPPESILLIDTPNEDGK 650

Query: 592 GIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
           G++  +L   L +G L    ++  TG + D +   LGT+P  L     +  + +   S R
Sbjct: 651 GVASVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRP-KLFKVQVQGRSAILCTSSR 709

Query: 650 PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ-KLHIRS 708
             ++Y   ++   + ++   + +   F S    + +       L I   + +    +++S
Sbjct: 710 SWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGVVAISASTLRIIAAEKLGVAFNVQS 769

Query: 709 IPLGEHPRRI 718
                 PRRI
Sbjct: 770 FEHKMTPRRI 779



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 143/309 (46%), Gaps = 39/309 (12%)

Query: 798  PTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 855
            P +G +  F +     +   +   ET   V +++ F G  L    + +++Y     D G 
Sbjct: 921  PVRGCVYTFHLSPNGDRFDFLHRTETPLPVGAIHDFRGMALVGFGKFLRMY-----DIGQ 975

Query: 856  RELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
            ++L ++C +    + +  +Q+ G  I+V D  +S+  L Y+  +  +   A D    ++S
Sbjct: 976  KKLLAKCENKNFPVNIVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVS 1035

Query: 915  AVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------ERG-------RLEVVGE 956
             V +LD      A+   NL  VR   + +E   D+        +RG       ++E+V  
Sbjct: 1036 CVCVLDYHTVAIADKFGNLSVVRLPERVNEDVQDDPTVSKSVWDRGWLNGASQKVELVAN 1095

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTN 1015
            + +G+ +   +  SL   +P    G    +++ T+ G IG + S +  ++  F   L+ +
Sbjct: 1096 FFIGDTITSLQKTSL---MP----GANEALVYTTIGGAIGCLVSFMSKDEVDFFTNLEMH 1148

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            +R     + G +H  +RS+    K+V     +DGD+ E F  +  ++  E+++ +  +V 
Sbjct: 1149 VRSEYPPLCGRDHLSYRSYYAPCKSV-----IDGDICEQFSLMELSKQKEVAEELGKTVS 1203

Query: 1076 ELCKRVEEL 1084
            E+ K++E++
Sbjct: 1204 EISKKLEDI 1212


>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score =  147 bits (371), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 168/756 (22%), Positives = 317/756 (41%), Gaps = 109/756 (14%)

Query: 50  LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
           +Q +L V I+G I +L  FR  G  +D++ + ++  +  +L+++ E + +  +   +   
Sbjct: 31  IQTILSVEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKN-VFDKIHQETFG 89

Query: 110 RIG-RPTDNGQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDI 166
           + G R    GQ   IDP  R  +IG      L  V+  D   +L  +  +   +   +  
Sbjct: 90  KSGCRRIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTIVY 149

Query: 167 KFL---YGCAKPTIVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQN 210
                  G   P    +  D  +A             +H+  YE+ L   + V   WS+ 
Sbjct: 150 SITGVDCGFDNPIFAAIELDYSEADQDSTGQAASEAQKHLTFYELDLG-LNHVSRKWSEQ 208

Query: 211 NLDNGADLLIPVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGR--VD 262
            +DNGA++L+ VP       GVL+  E  ++Y +    +    IP R  +    G   V 
Sbjct: 209 -VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVS 267

Query: 263 ADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYI 316
           A   R      +LL    G +  + + HE ++++ LKI+      + S++  L +  ++ 
Sbjct: 268 AATHRQKSMFFFLLQTEYGDVFKVTLEHENDRISELKIKYFDTIPVTSSMCVLKSGFLFA 327

Query: 317 GSSYGDSQLIKLN--------------------------LQPDAKGSYVEVLERYVNLGP 350
            S +G+  L +                             QP    + V + ++  +L P
Sbjct: 328 ASEFGNHGLYQFQAIGDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRI-DQVESLMP 386

Query: 351 IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSST 409
           I+D  V +L  +   Q+    G     S+RI+R G+ I+E A  +L G+   +W+++ + 
Sbjct: 387 IMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAVWTVKKNV 446

Query: 410 DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
           +D FD ++VVSF + T +L++   + +EE    GF   T +L       + L+QV    +
Sbjct: 447 NDEFDAYIVVSFANATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGI 504

Query: 470 RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLE 529
           R +    R   NEW++P   ++    +N  QV++A  GG L+Y E               
Sbjct: 505 RHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFE--------------- 547

Query: 530 YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVL 586
                  ++  G+    S+  AVG + D ++RI SL PD  + +++ + +     P S+L
Sbjct: 548 -------VDMTGQLMERSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSSP--PESLL 597

Query: 587 LCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
               +               +L   L +G L   +++M TG+L+D +   LG +   L +
Sbjct: 598 FLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFS 657

Query: 635 FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
              +    +   S RP + Y      L + ++ + +     F+S    + +       L 
Sbjct: 658 VIVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALR 717

Query: 695 IGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI 729
           + TI+ + +  +   IPL   PR+   Q + +   +
Sbjct: 718 VFTIERLGETFNETVIPLRYTPRKFVLQPKRKLLVV 753



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 46/351 (13%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGR 802
            +R+LD +T        L   E   SI + +F D +      VGTA  L    +     G 
Sbjct: 822  IRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTAKSLQFWPKRSFDAGY 881

Query: 803  ILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 860
            I ++  +EDGK L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  
Sbjct: 882  IHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DLGKRRLLR 936

Query: 861  ECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
            +C +      I++++  T  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 937  KCENKLFPNTIVSIH--TYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASY 994

Query: 918  ILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
             +D D   GA+   N++ VR   +  +DE       V E   G  + ++  G L      
Sbjct: 995  HIDFDTMAGADKFGNIYFVRL-PQDVSDE-------VEEDPTGGKI-KWEQGKL------ 1039

Query: 978  SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 1037
                  P  +   V   +G + +   +  L     + ++R+    + G +H  +RS    
Sbjct: 1040 ---NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGWRMHMRQEHPPLCGRDHMAYRS---- 1092

Query: 1038 KKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                  K+ +DGDL E F    LDL R   DE+ +T      E+ K++EE+
Sbjct: 1093 -AYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG----EILKKLEEV 1138


>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain
           ANKA]
 gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
          Length = 1216

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 172/750 (22%), Positives = 315/750 (42%), Gaps = 81/750 (10%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T +  GNF+ P+   +++AK   +E+     QG L  +    I+G I +
Sbjct: 5   YHLTLQKPTAITRTVYGNFSGPKAHEIVVAKGQVLELLRADKQGKLNVITSKDIFGIIRS 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           LE+FR  G  +D++ I ++  +  +L++D E ++ I R   +   + G R    G+   I
Sbjct: 65  LEIFRLMGSNKDYIAIGSDSGRLVILKYDDEKNDFI-RVHCETYGKSGIRRIIPGEYIAI 123

Query: 124 DPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKPTIV 178
           DP  R + L   +      ++  DNK  L  +  +   +   +    +    G   P  V
Sbjct: 124 DPKGRALMLCAIEKQKFVYILNRDNKENLTISSPLEAHKSHSICHAVVGLNVGFENPMFV 183

Query: 179 VLYQDNK--DARHVKTYEVAL----KDKDFVEGPWSQNN--------LDNGADLLIPVP- 223
            + Q+ +  D + + T E  +    K   F E     N+        +D  A LLIP+P 
Sbjct: 184 SIEQNYEALDKQVLNTNEQIMEYPKKGLCFWEMDLGLNHVIKKHTIPIDITAHLLIPLPG 243

Query: 224 --PPLCGVLIIGEETIVY---------CSANAFKAIPIRPSITKAYGRVDADGSRY--LL 270
                 G+++  E  +VY         CS      +    +I+     +    + +  L+
Sbjct: 244 GQQGPSGLIVCCENYLVYKKIDHDDIYCSYPRRLEVGEEKNISIVCWTIHRIKTFFFILI 303

Query: 271 GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN- 329
               G L+ + + HE   V  +  +      IA++I  L +  +++ + +G+    + + 
Sbjct: 304 QSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQFSG 363

Query: 330 ------------LQPDAKGSYVEV-LERYVNLG--------PIVDFCVVDLERQGQGQVV 368
                         P  K + +    ++  NL         PIVD  ++D +     Q+ 
Sbjct: 364 IGNDSNESMCTSNHPSGKNAIIAFKTQKLKNLYLVDQIYSLPIVDMKILDAKNSNIPQIY 423

Query: 369 TCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRI 427
              G     SLRI+++G+ I E A+ EL G  + +W+++      +D +++VSF   T I
Sbjct: 424 ALCGRGPRSSLRILQHGLSIEELANNELPGKPRYIWTIKKDNSSEYDGYIIVSFEGNTLI 483

Query: 428 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 487
           L +   + +EE       +   T+  +    N  +QV    +R ++    ++  EW  P 
Sbjct: 484 LEIG--ETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHING---KIVQEWVPPK 538

Query: 488 GYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEYEISCLDINPIGENPSY 546
              +N AT+N SQ++++  GG L+Y EI +   LTE+    +  EI CL I  I +N   
Sbjct: 539 NKQINAATSNGSQIVISLSGGELIYFEIDESHTLTEIFRKNINVEILCLSIQQIQQNKLR 598

Query: 547 SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL---LCAFE----------GI 593
           +   AVG   ++ VR+ S+        + L   I+P +     +C  E           I
Sbjct: 599 ASFLAVGCLDNV-VRLLSIEKDQYF--KQLSTYILPNNSSPQDICISEMKELGSQKEHTI 655

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
            YL   L  G LL  +++   G L++     LG + + +          +   S++  + 
Sbjct: 656 LYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTYLC 715

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683
           Y    K +YS +N   + +   F S    D
Sbjct: 716 YVYQGKYIYSPLNYDVLEYASSFYSEQCSD 745



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 149/360 (41%), Gaps = 40/360 (11%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG-RIL 804
            +++++    + I    L+  E   S+ +C       +     T   L   N P+   R+ 
Sbjct: 871  IKIINPINLQVIDKISLELEEAALSVCACELEALHCLIVGTTTNMTLKSRNVPSASLRVY 930

Query: 805  VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
             + + + KL L+     +   Y    FNGK++ ++  K+++Y       G ++L  +C +
Sbjct: 931  TYDI-NYKLNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYAL-----GKKKLLKKCEY 984

Query: 865  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
                 A+      + I   D+ +S+ +  Y   +  I   + D    W++  EILD    
Sbjct: 985  KDIPEAIVSIKVSNRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTI 1044

Query: 925  LGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGEFVNR 965
            + A+   ++F +R   E A  EE G                   ++E +  +H+GE V  
Sbjct: 1045 IAADKFDSVFILRVPEE-AKQEEYGIANKCWYGGEVINSSTKNRKMEHIMSFHIGEIVTS 1103

Query: 966  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVIKGVG 1024
             +   L    P S       +I+ T+ G IG      +++ L L + L+  LR     + 
Sbjct: 1104 LQKVKLS---PVSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKHALC 1156

Query: 1025 GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            G  H  +RS+ +       ++ +DGDL E F  L      +I   +  + +E+ +++E++
Sbjct: 1157 GREHIFFRSYYHP-----VQHVIDGDLCEQFSSLPFEVQRKIGSDLEKTPDEILRKLEDI 1211


>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
 gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
          Length = 1246

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 263/1224 (21%), Positives = 471/1224 (38%), Gaps = 177/1224 (14%)

Query: 6    YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT--PQGLQPMLDVPIYGRIA 63
            Y +T  +PT+   +  G+F    +  ++ A  +R+ I  ++   +G   +    ++G I 
Sbjct: 10   YALTVKQPTSTQDALTGDFIGNGKQQILTASGSRLAILEVSRRQKGFNEVYSQDVFGIIR 69

Query: 64   TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
             +  FR  G  +D + I T+  +    ++ A+     T           R    G+    
Sbjct: 70   RIAKFRIAGGTKDHIVITTDSGRLVTYEYVADEQTFKTVHFETYGKSGIRRVVPGEYLAA 129

Query: 124  DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCAKPTIV 178
            DP  R I +   +    V      GQ   A +  LE  +   + +       G   P   
Sbjct: 130  DPKGRAIMIASIEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYTLIGLDVGYDNPMFA 189

Query: 179  VLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVPP- 224
             L  D   +    T             YE+ L     V   WS+  +D  A+ L  VP  
Sbjct: 190  SLELDFSSSETDPTGEAFDELKKELVYYELDLGLNHIVRK-WSEP-VDRTANALYRVPGG 247

Query: 225  --PLCGVLIIGEETIVY-----CSANAFK-AIPIRPSITKAYGR-----------VDADG 265
                 GVL  G + I Y      ++N  + AIP R   T+   R           +    
Sbjct: 248  PNAPSGVLCCGLDNITYRRIFNTNSNVHRLAIPRREGATEDPNRKRSIVAGTLYSLKGGD 307

Query: 266  SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
              YLL    G +  L +      V  +KI+      +A++I  L    VY     GD  L
Sbjct: 308  FFYLLQTDDGDVFKLTVDAPSGTVERIKIKYFDTIPVATSICILRAGFVYAACESGDRIL 367

Query: 326  IKLN-----------------LQPDA----------KGSYVEVLERYVNLGPIVDFCVVD 358
             +L                  + P+A            + +  +E   +L PI+   + +
Sbjct: 368  YELESLGDETDDPMFESGQFPVDPEAVFAPPFFKPRALTNLTAVETMPSLNPIMGMEIAN 427

Query: 359  LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFL 417
               +   Q+ T +GA    + R  RN + + +     L Q    +W+ + + +D  DT +
Sbjct: 428  PMLEDAPQIYTINGAGGRSTFRTTRNALEVLDLIESPLPQNASDVWTTKLTLEDETDTLI 487

Query: 418  VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS--- 474
            V+     +R L + + +++EE    GF + T TL       + ++QV    +R +     
Sbjct: 488  VLCL--HSRTLVLKIGEDVEEASNTGFMADTNTLGVQQFGEDCIIQVHPKGIRHIQGIQF 545

Query: 475  ------TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA- 526
                   +     +W+ P   ++     N  QV +A   G ++Y E   DG L   +   
Sbjct: 546  PEDGAVATHTSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDADGSLAMAEEEI 605

Query: 527  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDL--NLITKEHLGGEIIPR 583
             L+  I+CL I  + E    +   AVG  +D +VRIF+L PD+  N++    +     P 
Sbjct: 606  ALDSTINCLAIPDVPEGSVRAFFMAVGC-SDQTVRIFNLSPDMEGNILRSISVQALTSPP 664

Query: 584  SVLLC------AFEGIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
            S L        +  G S +L   L  G  +  +L+  TG++ D ++  LG +PI     +
Sbjct: 665  SGLTINMMSDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVT 724

Query: 637  SKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
                  + A + RP + Y+  +   L  + +N         F  + F   + ++   EL 
Sbjct: 725  VAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNFEGSQFKGIICVSAN-ELR 783

Query: 695  IGTIDDI------QKLHIRSIP---LGEHPRRICHQEQSRTFAICSLKNQSCAEES---- 741
            I T +D+      + + ++  P   +G H + + +  QS    + +   Q    E+    
Sbjct: 784  IFTFNDLTDNTTYETIQLKYTPRKMVGYHEQGVFYVIQSENNTLSADTRQKLIAEADTKQ 843

Query: 742  ---------------EMHFVRLLDDQTFEFISTYPLDTFEYGC----------------- 769
                           E    R   D+       YP     +                   
Sbjct: 844  EDEDDAPMEIEGANGETTNGRATSDELPPTAFGYPRAQGNWASCIQVVDPVTEKAVTHTV 903

Query: 770  ------SILSCSF----SDDSNVYYCVGTAYVLP-EENEPTKGRILVF-IVEDGK-LQLI 816
                  S++S +     S  ++ +  VGTA  L  +    +   I V+ I  DG+ L+  
Sbjct: 904  EINANQSLVSAALVYFESRGNDAFLAVGTAKDLSFQPYHYSSASIQVYKISPDGRELEFF 963

Query: 817  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 876
             E E      +L AF GK++A + + + LY   +R    R+ Q+       I+ L  +T+
Sbjct: 964  HETEVTEPPTALLAFKGKMVAGVGRNLALYDCGMRS-VLRKAQATNCVPTRIVDL--KTQ 1020

Query: 877  GDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            G  +VV D ++S++ +++K +     +     D      +  E+LD D  +G +   NL+
Sbjct: 1021 GSRLVVSDSVQSVTYVVHKDQIHPNRMIPFIDDTIQRHTTCTEMLDYDTTVGGDKFGNLW 1080

Query: 935  TVR---KNSEGATDEERGRLEVVGEYHLGEFVNR------FRHGSLVMRLPDSDV--GQI 983
             VR   K SE + +   G   +V + +LG   NR      +    + + +  + +  G  
Sbjct: 1081 LVRCPQKVSESSDESPDGSDILVDKSYLGGTANRLDSVAHYFANDIPISIQKTHLLSGAE 1140

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
              + +  + G +G +       Q+   ++L+  LR   K + G +H  +RS+ N  K+V 
Sbjct: 1141 RIIFWAGLQGTLGALIPFNSRRQHKMFQQLELQLRSDDKPMSGRDHLAFRSYFNPVKSV- 1199

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEI 1066
                +DGDLIE FL LSR + + I
Sbjct: 1200 ----IDGDLIERFLVLSRDKRESI 1219


>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
 gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
          Length = 1258

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 190/794 (23%), Positives = 328/794 (41%), Gaps = 120/794 (15%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP---QGLQPMLDVPIYGRI 62
           Y +T  K + VT +  GNF++P+   +++A+ + +E  LL P     LQ ++ V  +G I
Sbjct: 5   YNMTLSKTSAVTCAVYGNFSAPKAQEIVVARGSTLE--LLRPDEQNRLQTVISVNCFGLI 62

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIG 121
            +LE FR  G  +D+L + ++  +  +L+++  +  +  +   +   + G R T  GQ  
Sbjct: 63  RSLETFRLVGANRDYLLVGSDSGRIVILEYNT-TKNIFDKVHQETYGKTGCRRTVPGQYL 121

Query: 122 IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-----YGCAKPT 176
            +DP  R   +   +    V   +   Q +   +  LE  +   I F       G   P 
Sbjct: 122 AVDPKGRSCMVSAVERQKFVYILNRDLQSRLTISSPLEAHKSYTIVFATVGLDVGFDNPQ 181

Query: 177 IVVL---YQD-----NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPL-- 226
              +   Y D         + +  YE+ L            + +   A  LIPVP     
Sbjct: 182 FAAIECQYDDFGKKGPNPQKLLTIYEMDLGVNHVTRK--HSDKIPFTAHDLIPVPGGTDG 239

Query: 227 -CGVLIIGEETIVYCSAN---AFKAIPIRPSITKAYGRVDADGSR--------YLLGDHA 274
             GVL+  E  + Y          A+P R       G +    SR        +L+    
Sbjct: 240 PGGVLLCCENFLSYYKQGHPVLSCAMPRRLDTPAEKGLMVVCWSRHKLKNFFFFLIQSEY 299

Query: 275 GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL------ 328
           G L+ + ++H++  V+ ++        +A +I  L    ++  S +G+  L +       
Sbjct: 300 GDLYKVTLSHKEGVVSEIQCSYFDSIPVAISICVLKTGFLFAASEFGNHALYQFASLGDV 359

Query: 329 ------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVD--------LERQGQ 364
                 +  P+ + + V    R +          +L PI D  V+D        L+  G 
Sbjct: 360 TPALVTSSHPNRENAVVAFKPRTLKNLTPFDELSSLAPITDMKVMDCFSTQTQVLQADGS 419

Query: 365 G-------------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTD 410
           G             Q+   SG     +LRI+R+G+ + E  + EL G    +++++    
Sbjct: 420 GMQQTVTTGMSVGCQIYALSGRGPRSALRILRHGLTLGEAGASELPGQPNALFTIK---- 475

Query: 411 DPF--------------DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 456
            PF              D ++VVSF+ +T  L +   D + E    GF  +  TLF    
Sbjct: 476 -PFGASYAPVAEGEVESDRYIVVSFVDQTLTLLVT-SDNIHEVTDSGFAKEQPTLFAMRM 533

Query: 457 IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 516
                +QV    +R V++  R    EW++PPG  V +A +N SQV++A  GG +   E+ 
Sbjct: 534 QDKSAIQVMPTGIRHVAAGRRT--TEWRAPPGRQVTMAASNGSQVVIALSGGEIQLFELD 591

Query: 517 ---DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLIT 572
              +G L+EV    +  E++ L + P+    + SQ  AV    D SVR+ SL  D  L  
Sbjct: 592 ADTNGHLSEVAKRDIGCEVAALTVQPLSSGRTRSQFMAVA-GVDSSVRVLSLDSDRPLRQ 650

Query: 573 KEHLGGEIIPRSVLLCAF-EGIS---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
                      SV +  F EG +   YL   L DG L+  +++  TG+L+D+++  LG +
Sbjct: 651 LAAQALRTTASSVCMLQFGEGTTATIYLAIGLEDGVLVRSVVDGVTGQLSDQRQRVLGPR 710

Query: 629 PITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLL-------YSNVNLKEVSHMCPFNSAA 680
            +TL   +       + A S RP + + +N           Y  V L ++  +  F+ AA
Sbjct: 711 RVTLCPITVDGGRPAMVAMSSRPFLCFQANDYSAAGASGGQYQCVPLTKIPALPRFDHAA 770

Query: 681 FPDSLAIAKEGELT 694
            P S+   +EG  T
Sbjct: 771 -PFSIENCQEGICT 783



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 159/366 (43%), Gaps = 41/366 (11%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DSNVYYCVGTAYVL----PEENEPT 799
            +R++D  T        LD  E   ++  C F    D+     VGTA  +    P  +   
Sbjct: 902  IRVVDPLTASTSFKLDLDVDEAATAMTVCYFYQLKDNRPCLVVGTATGVDPHNPSRSAHG 961

Query: 800  KGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-LRDDGTRE 857
            K  I  ++ ++   LQLI     +G   ++  F G+LL A+     +   + + + G + 
Sbjct: 962  KCYIKTYLYDESYNLQLIHVTPLEGVPSAMYPFEGRLLVALRGSPTVAPVLRIYELGKKR 1021

Query: 858  LQSECGHH-----GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
            L  +C +      G I+ L V    D I   D   SI +L +++ +  ++  + D     
Sbjct: 1022 LLKKCEYKFLPESGGIMWLDVNK--DRIFAADSRDSILVLRWRYSDNQMQVISDDTYPRC 1079

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR-----------LEVVGEYHLGE 961
            ++A  +LD +  +  +   N+  +R   +       GR           ++++G +H+GE
Sbjct: 1080 ITAAAVLDYNTIVVGDKFDNIAVLRVPGDAKDAGAWGRDNDYASGNTFKMDLIGHFHVGE 1139

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE-QYLFLEKLQTNLRKVI 1020
             +   +  ++V        G    VI+ TV G IG +     + ++ FL+ L+ ++R   
Sbjct: 1140 TITSLQRVTMV-------AGGAEIVIYSTVLGTIGALYPFSSKREHGFLQALEMHMRNTA 1192

Query: 1021 KG--VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
                + G  H  +RSF +       KNF+D DL E +  L   +  +I+  M+ + +E+ 
Sbjct: 1193 ASPSLTGREHVMYRSFYHP-----IKNFVDADLCEVYYQLPAEKQRQIAVDMDKTPQEVM 1247

Query: 1079 KRVEEL 1084
            K++E++
Sbjct: 1248 KKLEDI 1253


>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
           queenslandica]
          Length = 1160

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 174/807 (21%), Positives = 346/807 (42%), Gaps = 106/807 (13%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYGRIA 63
           Y +T  KP+ +T +  GNF+  +   +++A+   +E+    P    +  ++   ++G I 
Sbjct: 4   YALTLQKPSCITAAVHGNFSGRKAQEVVVARGKVLELLRPDPNTGKVVELVSTEVFGLIR 63

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGI 122
           +L  FR  G  +D++ + ++  +  +L++D   + +  +   +   + G R    GQ   
Sbjct: 64  SLITFRLTGSTKDYIVLGSDSGRIVILEYDPVKN-VFEKVHQETYGKSGCRRIVPGQYLA 122

Query: 123 IDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL-------DIKF---LY 170
           +DP  R  +IG      L  ++  D+  +L  +  +   +   L       D+ F   L+
Sbjct: 123 VDPKGRALMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTLVYHVVGVDVGFENPLF 182

Query: 171 GCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV 222
            C +    + Y+++ +    +  +VA ++  + E     N+        LD+ A++LI V
Sbjct: 183 ACLE----LDYEESDNDHTGEAAQVAQQNLTYYELDLGLNHVVRKYSEPLDDMANMLITV 238

Query: 223 PPPL---CGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVD-ADGSR----------- 267
           P       GVL+  E  I+Y   N      IR  I +    +D AD S            
Sbjct: 239 PGGTDGPSGVLVCCENYIIY--KNFGDQPDIRCPIPRRQNDLDDADRSMLIITSAMHKTK 296

Query: 268 ----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
               +LL    G +  +++  E + V  +KI+      + S++  L + +++  S +G+ 
Sbjct: 297 HLFFFLLQSEQGDIFKVMLDVEDDIVVRIKIKYFDTVPVCSSLCVLKSGLLFCSSEFGNH 356

Query: 324 QLIKL-NLQPDAKGSY---------------------VEVLERYVNLGPIVDFCVVDLER 361
            L ++ +L  D++  +                     + +++   +L PI+   + DL  
Sbjct: 357 YLYQIAHLGDDSEREFHSDYPLEEGETFFFGPRPLKNLILVDEMESLSPIMSCQIADLAN 416

Query: 362 QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVS 420
           +   Q+    G     SLR++R+G+ + E A  EL G    +W+++  + + FD+++VVS
Sbjct: 417 EDTPQLYAACGRGPRSSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSYIVVS 476

Query: 421 FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
           F++ T IL++   + +EE    GF   T TL C     + L+Q+    +R + S  R   
Sbjct: 477 FMNATLILSIG--ETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIRSDKR--V 532

Query: 481 NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDIN 538
           NEW+SP    +     N  QV++A  GG +VY E+   G L E  +  ++  E+ C+ + 
Sbjct: 533 NEWRSPGKRLIRQCAVNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICISLG 592

Query: 539 PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLC 598
            +       +  AVG+ +D +VRI SL   +  T + L  + +P          +   LC
Sbjct: 593 SVPPGQQRCRFLAVGL-SDQTVRIISLDPHD--TLQPLSMQALP---------ALPESLC 640

Query: 599 ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 658
                     ++NM +G ++D   VS G   + +          V A S R  + Y+   
Sbjct: 641 ----------IVNM-SGNVSDDTTVSTGGLFLNI----GLQNGGVIAVSSRTWLNYTYQS 685

Query: 659 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR 717
           +   + ++   + +   F S   P+ +       L I  ++ +  +  + S PL   PR+
Sbjct: 686 RFHLTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRILALEKLGVVFNQVSTPLQYTPRK 745

Query: 718 ICHQEQSRTFAICSLKNQSCAEESEMH 744
           +          +    + +  E +++H
Sbjct: 746 LLIHPPMSNLVLIETDHNAFTEATKLH 772



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 150/345 (43%), Gaps = 60/345 (17%)

Query: 766  EYGCSILSCSFSDDSNV--YYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKE 820
            E   S+  C F    ++  +  VGTA  ++      + G ++VF +  DG KL+ +   +
Sbjct: 844  EAAFSLAVCQFVSKGDLEWFVVVGTAKDMIITPRAISSGSLIVFRLSPDGSKLEHVHTTQ 903

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDF 879
                  ++  F G+LL  + + +++Y     D G +++  +C   H   L + ++  G  
Sbjct: 904  LDDVPIAMAPFQGRLLVGVGKLLRIY-----DIGKKKMLRKCENKHLPYLVVDIKVMGRR 958

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
            + VGD+ +++  L Y+  E  +   A +    + +   ILD +    A+   N+  +R  
Sbjct: 959  VYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNITILRLP 1018

Query: 940  SEGATDE------------ERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
            S+  TD+            +RG L        V+  YH+GE +N     SL+        
Sbjct: 1019 SD-VTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGEGINTLHKVSLI-------P 1070

Query: 981  GQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
            G    +++ T++G IG++      E   F + L+ ++R            +W + +    
Sbjct: 1071 GGSEVLVYTTLSGSIGILVPFSSKEDSDFFQHLEMHMRS-----------EWSNLS---- 1115

Query: 1040 TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                   +DGDL E +  L  ++  EI+  ++ S  E+ K++E+L
Sbjct: 1116 ------VIDGDLCEVYNSLDPSKRREIALDLDRSPSEVAKKLEDL 1154


>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
          Length = 1224

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 189/830 (22%), Positives = 331/830 (39%), Gaps = 106/830 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQEL---------------NLIIAKCTRIEIHLLTP 47
           ++ Y +T  + T    + +G+F+                     + +A+ T +E  LL P
Sbjct: 1   MYLYSLTLQRATGAVCAVIGSFSGRDSKKSAASGSSSSSSSTQEIAVARGTTLE--LLRP 58

Query: 48  QGLQPMLDVPIYGRIATLEL--FRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG 105
                    P  GR+ TL    FR  G  +D+L + ++  +  +L++  + + L      
Sbjct: 59  D--------PETGRLRTLLSVDFRLTGATKDYLVVGSDSGRLVILEYSPDRNRLDKVHQE 110

Query: 106 DVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQV 163
                  R    GQ+  +DP  R + +   +   L  V+  D   +L  +  +   +   
Sbjct: 111 TFGKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAARLTISSPLEAHKSNT 170

Query: 164 LDIKFLY---GCAKPTIVVL---YQDNKDARHVKTYEVALKDKDFVEGPWSQNN------ 211
           L         G   P    +   Y ++      +  E A K   F E     N+      
Sbjct: 171 LTFSLTALDCGFDNPVFAAIELEYAESDRDPTGQAAEQAQKHLTFYELDLGLNHVSRKAS 230

Query: 212 --LDNGADLLIPVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGR--V 261
             +DNGA+LL+ VP       G+L+  +  ++Y +         IP R  +    G   V
Sbjct: 231 EPIDNGANLLVTVPGGGDGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRADLPAERGVLIV 290

Query: 262 DADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
            A   R      +LL    G +  + + H  + VT L+I+      + S I  L +  ++
Sbjct: 291 AAATHRQKSLFFFLLQTEYGDIFKVDLEHSNDTVTELRIKYFDTIPVTSAICVLRSGFLF 350

Query: 316 IGSSYGDSQLIKLN--------------------------LQPDAKGSYVEVLERYVNLG 349
             S +G+  L +                             QP A  +   + E   +L 
Sbjct: 351 AASEFGNHALYQFRDIGRDVDVESSSATLMETDEGFQPVFFQPRALKNLYRIDE-IESLM 409

Query: 350 PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSS 408
           PI+D  V +L  +   QV T  G     +LRI+R G+ I+E A   L      +W+++ +
Sbjct: 410 PIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKN 469

Query: 409 TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
            +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV    
Sbjct: 470 INDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNG 527

Query: 469 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ 527
           +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+   
Sbjct: 528 IRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQD 585

Query: 528 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
           +  +++CL I P+ E    S+  AVG + D ++RI S+ PD  L           P S++
Sbjct: 586 MSGDVACLAIAPVPEGRQRSRFLAVGSF-DNTIRILSVDPDDCLQPLSVQSVSSAPESLM 644

Query: 587 LCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
               +               +L   L +G L    ++M TG+L+D +   LG +P  L  
Sbjct: 645 FLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFP 704

Query: 635 FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
               +   +   S RP + Y      L + ++   +     F+S    + +       L 
Sbjct: 705 CIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALR 764

Query: 695 IGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 742
           I TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E
Sbjct: 765 IFTIEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEERE 814



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 44/365 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 801
            +R+LD ++ +      L   E   SI + +F D +      VGTA  L   P+ N  + G
Sbjct: 873  IRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL-SAG 931

Query: 802  RILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
             I ++  V++G+ L+L+ + + +    +L  F G+LLA +   ++LY     D G R+L 
Sbjct: 932  FIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLL 986

Query: 860  SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
             +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   
Sbjct: 987  RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1046

Query: 919  LDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLG 960
            +D D   GA+   N++  R                  K  +G  +    ++E + ++H+G
Sbjct: 1047 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1106

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKV 1019
            + V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+ 
Sbjct: 1107 DVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQE 1159

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
               + G +H  +RS          K+ +DGDL E F  L      +I+  ++ +  E+ K
Sbjct: 1160 HPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPSLPADMQRKIADELDRTPGEILK 1214

Query: 1080 RVEEL 1084
            ++E++
Sbjct: 1215 KLEDI 1219


>gi|357496593|ref|XP_003618585.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355493600|gb|AES74803.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 702

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 173/699 (24%), Positives = 303/699 (43%), Gaps = 76/699 (10%)

Query: 431  NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 490
            ++ + ++E    GF   T +L       + L+QV    +R +        NEW++P   +
Sbjct: 30   SVRETVKEVTDNGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIREDGH--INEWRTPGKRT 87

Query: 491  VNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQI 549
            +    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P+ E    S+ 
Sbjct: 88   IAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRF 147

Query: 550  AAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL-GDGHLLN 607
             AVG + D ++RI SL PD  + T   LG + +  +     F  +   +    G+G L  
Sbjct: 148  LAVGSY-DKTIRILSLDPDDCMQT---LGIQSLSSASESLLFLEVQASVGGEDGNGVLSR 203

Query: 608  FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 667
             +++M TG L+D +   LG +P  L     +    +   S RP + Y      L + ++ 
Sbjct: 204  TVVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSY 263

Query: 668  KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRT 726
            + +     F+S    + +       L I TI+ + +  +   IPL   P +   Q + + 
Sbjct: 264  ETLEFAASFSSDQCVEGVVALAGEALRIFTIERLGETFNETVIPLRYTPMKFVLQPKRKL 323

Query: 727  FAIC-SLKNQSCAEESEM---------------HF-------------VRLLDDQTFEFI 757
              +  S +    AEE E                H+             +R+LD +T    
Sbjct: 324  LVVIESDQGAFTAEEREANGGEDEDKDDPLSDEHYGYPKAESDKWASCIRILDPKTGNTT 383

Query: 758  STYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL--PEENEPTKGRILVF-IVEDGK- 812
                L   E   S  + +F D +      VGTA  L        T G I ++  +EDG+ 
Sbjct: 384  CLLELQDNEAAFSGCTVNFHDKEYGTLLDVGTAKGLQFTPRRSLTAGFIHIYRFLEDGRS 443

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA-- 870
            L+L+ + + +G   +L+ F G+LLA I   ++ Y     D G R L  +  +   +    
Sbjct: 444  LELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFY-----DLGKRRLLRK--YENKLFPNT 496

Query: 871  -LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
             + +QT  D I VGD  +S     Y+ +E  +   A D    W++A   +D D   G E 
Sbjct: 497  IVSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDFDTMAGIEE 556

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
            +     + K  +G  +    ++E + ++H+G+ ++  +  SL+        G    ++ G
Sbjct: 557  DPTGGRI-KWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLI-------PGGGECILNG 608

Query: 990  TVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 1048
            TV G IG + A    +   F   L+ ++R+    + G +H  +RS          K+ +D
Sbjct: 609  TVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----AYFPVKDVID 663

Query: 1049 GDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEE 1083
            GDL E F    +DL R   DE+ +T      E+ K++EE
Sbjct: 664  GDLCEQFPTLPMDLQRKIADELDRTRG----EILKKLEE 698


>gi|116191283|ref|XP_001221454.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
 gi|88181272|gb|EAQ88740.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
          Length = 979

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 190/850 (22%), Positives = 354/850 (41%), Gaps = 126/850 (14%)

Query: 288  KVTGLKIELLGETSIASTISYLDNAVVYIGSSY-----------GDSQL----------I 326
            +V  +K+       +AS++  L +  + + S +           GD Q+          +
Sbjct: 112  EVNCIKLRYFDTVPVASSLCILKSGFLLVASEFENHHLYQFEQLGDDQVEFNSNRDIAPV 171

Query: 327  KLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQG--QVVTCSGAYKDGSLRIVRN 384
              + QP    S VE +E   ++ PI+   VV+L R+G    Q+ +  G+      RI+R+
Sbjct: 172  FFDPQPSGNLSLVETIE---SMNPILASGVVNL-REGDDAPQIYSACGSGTRSHFRILRH 227

Query: 385  GIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443
            G+ +NE  + EL G +  +W+ + ++ D  DT+++++  S T  L +++ +E+++    G
Sbjct: 228  GLEVNEIVASELPGTVSAVWTTKLTSQDKHDTYIILT--SSTDTLVLSIGEEVKQVSDSG 285

Query: 444  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 503
            F +   TL       + L QV    +R + S+ + +  EW +P   ++     N  QV +
Sbjct: 286  FLTSVSTLAIQQIGDDSLAQVHPKGIRHIRSSDQII--EWPAPQHRTIVATATNQRQVAV 343

Query: 504  ATGGGHLVYLEI--GDGILTEVK-HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 560
            A   G ++Y E+   DG L E     ++   ++CL +  + E    S   AVG   D ++
Sbjct: 344  ALSSGEIIYFELDDADGSLAEYDGREEMSGTVTCLSLGQVPEGRLRSSFLAVGC-DDRTI 402

Query: 561  RIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD 619
            RI SL P+  L ++               + + ++    AL    + + LL       T+
Sbjct: 403  RILSLDPESTLESR---------------SVQALTAAPSALAIIPMDDSLLGGSNSSDTN 447

Query: 620  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS-NKKLLYSNVNLKEVSHMCPFNS 678
             K   LG +P+ L   + K    V A S +  + +    +  L+  +   E + + P   
Sbjct: 448  YK--FLGVRPVRLFPVTVKQKPRVLALSSKAWLGHVDLARGFLFYTIE-SENNTLAPELR 504

Query: 679  AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--S 736
            A             +  GT          + P GE P  +        F     + +  S
Sbjct: 505  AQL-----------VAAGT----------TAPGGEKPDHVAEILPPEQFGYPRGQGRWAS 543

Query: 737  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS---DDSNVYYCVGTAYVLP 793
            C        + ++D      I T  L   E   S+   SF+   D+S +    G   VL 
Sbjct: 544  C--------ISIVDPIGETVIRTIHLQENEAAASLAIASFTSQDDESFLVVSTGRDMVL- 594

Query: 794  EENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
               + + G   V+   +DG+ L+LI +  T     +L AF G+L+A I + + +Y   L+
Sbjct: 595  NPRQLSGGYSYVYRFHDDGRDLELIHKTGTTEPPTALEAFRGRLVAGIGKTLVVYDLGLK 654

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
                R+ Q+     G I++L  QT+G+ IVVGD+   ++++ Y+ E   +     D  A 
Sbjct: 655  -QMLRKTQANDVVPGLIVSL--QTQGNRIVVGDVQHGVAMVAYRTESNQLIPFVDDTIAR 711

Query: 912  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD-EERG----------------RLEVV 954
            W +   ++D D   G +   N + VR   + + + +E G                RL++ 
Sbjct: 712  WTTCTTMVDYDSVAGGDKFGNFWIVRTPQQASLEADEPGAHRLLHAREHLHGAPHRLQLT 771

Query: 955  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQ 1013
              +H  +         LV       VG    +++    G +GV +  +  E   F   L+
Sbjct: 772  AHFHTQDIPTGITKTHLV-------VGGQEVLVWSGFQGTVGVFVPFVTREDADFFLALE 824

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             ++R     + G +H  +R +        AK  +DGDL E +  L   +   I+  ++ S
Sbjct: 825  QHMRGEEPSLIGRDHLAYRGYYEP-----AKGVVDGDLCERYQLLPGDKKQRIAAELDRS 879

Query: 1074 VEELCKRVEE 1083
            V E+ +++ +
Sbjct: 880  VREVERKISK 889


>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
          Length = 1286

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 160/766 (20%), Positives = 314/766 (40%), Gaps = 112/766 (14%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T    GNF+ P+   ++++K   +E+     QG L  +    ++G I  
Sbjct: 5   YHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDVFGIIRC 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           L+ FR  G  +D++ I ++  +  +LQ+  E ++ + R   +   + G R    G+   +
Sbjct: 65  LQTFRLTGSNKDYVVIGSDSGRLVILQFSNEKNDFV-RVHCETYGKSGLRRIIPGEYIAV 123

Query: 124 DPDCRLIGLHLYD--GLFKVIPFDNKGQLKEAF--------------------------- 154
           DP  R + +   +      ++  D K QL  +                            
Sbjct: 124 DPKGRALMICAIERQKFVYILNRDTKEQLTISSPLDAHKSHTICHDVVGMDVGFENPIFA 183

Query: 155 ----NIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQN 210
               N  + + QV +   + GC + T++ L++ +    HV                    
Sbjct: 184 SIEQNYEMYDKQVTNTNEIDGCTRKTLLCLWEMDLGLNHVIRKHTL-------------- 229

Query: 211 NLDNGADLLIPVP---PPLCGVLIIGEETIVYCSA---NAFKAIPIRPS---------IT 255
            +D+ A LLIP+P       GV++  +  +VY      + + A P R           + 
Sbjct: 230 PIDSSAHLLIPIPGGQQGPSGVIVCCDNYLVYKKVEHVDVYCAYPRRLETGQEKNISIVC 289

Query: 256 KAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
            A  R+       L+    G L+ + + HE   V  +  +      +A+ I  + +  ++
Sbjct: 290 SALHRI-RKFFFILIQSEFGDLYKIEMDHEDGIVKEITCKYFDTVPVANAICVMKSGSLF 348

Query: 316 IGSSYG-------------DSQLIKLNLQPDAKGSYVE----------VLERYVNLGPIV 352
           + + +G             D++ +  +  P  + + +           ++++  +L PI+
Sbjct: 349 VAAEFGNHFFYQFSGIGDDDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPIL 408

Query: 353 DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDD 411
           D  ++D +     Q+    G     SLRI+++G+ I E A  EL G  K +W+++     
Sbjct: 409 DMKILDAKNANSPQIYALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNAS 468

Query: 412 PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
            +D +++VSF   T IL +   + +EE       +   T+  +    N L+QV    +R 
Sbjct: 469 DYDGYIIVSFEGSTLILEIG--ETVEEVVDSLLLTNVTTIHVNILYDNTLIQVHDTGIRH 526

Query: 472 VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEY 530
           ++    ++ +EW  P    +  AT+N++Q++++  GG L+Y EI +   L E+    L  
Sbjct: 527 ING---KVVHEWVPPKNKQIKAATSNSTQIVISLSGGELIYFEIDESHTLVEIFRKNLNV 583

Query: 531 EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRS------ 584
           E  CL I  + EN   +   AVG   ++ VR+ S+       +  L   I+P +      
Sbjct: 584 ETLCLSIQQVEENKLRANFLAVGCLDNV-VRLLSIEKEKYFNQ--LSTFILPNNSSAQDI 640

Query: 585 --VLLCAF-----EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 637
               +C         + +L   L +G LL  +++  TG LT+     LG + + +     
Sbjct: 641 CISQMCELGNDKERKLIFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHL 700

Query: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683
           K  + +    ++  + Y    K +YS +N   + +   F+S    D
Sbjct: 701 KKNSALLVLCEKTYLCYVHQGKYIYSPLNYDILEYASSFHSEQCSD 746



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 47/364 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENEPTKGRI 803
            ++++   + + I    L+  E   S+ +C         +C  VGT   L  +N       
Sbjct: 940  IKIIHPISLQTIDKISLEMEEAALSVCACELE----ALHCLIVGTTTNLSLKNRTAPAAA 995

Query: 804  LVFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            L     D   KL L+     +   +    FNG+LLA+I  K+++Y       G ++L  +
Sbjct: 996  LRVYTYDINYKLNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYAL-----GKKKLLKK 1050

Query: 862  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            C +     A+  ++  GD I   D+ +S+ +  Y      +   + D    W++  EILD
Sbjct: 1051 CEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDSNMNTLRLISDDIIPRWITCSEILD 1110

Query: 921  DDIYLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGE 961
                + A+   ++F +R   E A  EE G                   RLE +  +H+GE
Sbjct: 1111 HHTIMAADKFDSVFVLRVPEE-AKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSFHVGE 1169

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVI 1020
             V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR   
Sbjct: 1170 IVTSLQKVKLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEN 1222

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              + G  H  +RS+ +  + V     +DGDL E F  L      +++  +  + +++ ++
Sbjct: 1223 PPLCGREHIFFRSYYHPVQHV-----IDGDLCEQFSSLPYDVQRKVAADLERTPDDILRK 1277

Query: 1081 VEEL 1084
            +E++
Sbjct: 1278 LEDI 1281


>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
 gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
          Length = 1230

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 164/751 (21%), Positives = 314/751 (41%), Gaps = 82/751 (10%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T    GNF+ P+   ++++K   +E+     QG L  +    I+G I  
Sbjct: 5   YHLTLQKPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDIFGIIRC 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           L+ FR  G  +D++ I ++  +  +LQ+  E ++ + R   +   + G R    G+   +
Sbjct: 65  LQTFRLTGSNKDYVVIGSDSGRLTILQFSNEKNDFV-RVHCETYGKSGLRRIIPGEYIAV 123

Query: 124 DPDCRLIGLHLYD--GLFKVIPFDNKGQLKEAFNIRLEELQVL--DIKFL-YGCAKPTIV 178
           DP  R + +   +      ++  D K QL  +  +   +   +  D+  +  G   P   
Sbjct: 124 DPKGRALMICAIERQKFVYILNRDTKEQLTISSPLDAHKSHTICHDVVGMDVGFENPMFA 183

Query: 179 VLYQDNK--DARHVKTYEVALKDKDFVEGPWSQN------------NLDNGADLLIPVP- 223
            + Q+ +  D +   T E+    +  +   W  +             +D  A LLIP+P 
Sbjct: 184 SIEQNYEALDKQVTNTSEIDSYTRKTLLSLWEMDLGLNHVIRKYTFPIDASAHLLIPIPG 243

Query: 224 --PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSI--TKAYGRVDADGSRY------LL 270
                 GV++  +  +VY     A+ + A P R      K    V +   R       L+
Sbjct: 244 GQQGPSGVIVCCDNFLVYKKVDHADVYCAYPRRLETGQEKNLSIVCSTLHRIRKFFFILI 303

Query: 271 GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG--------- 321
               G L+ + + HE   V  +  +      +A+ I  + +  +++ + +G         
Sbjct: 304 QSELGDLYKIEMEHEDGVVKEITCKYFDTVPVANAICVMKSGSLFVAAEFGNHFFYQFSG 363

Query: 322 ----DSQLIKLNLQPDAKGSYVE----------VLERYVNLGPIVDFCVVDLERQGQGQV 367
               D++ +  +  P  + + +           ++++  +L PI+D  V+D +     Q+
Sbjct: 364 IGDEDNEAMCTSKHPSGRNAIIAFRTKKLTNLFLIDQVYSLSPILDMKVIDAKNASSPQI 423

Query: 368 VTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETR 426
               G     SLRI+++G+ I E A  EL G  K +W+++      +D +++VSF   T 
Sbjct: 424 YALCGRGPRSSLRILQHGLSIEELADNELPGRPKFIWTIKKDNASDYDGYIIVSFEGSTL 483

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 486
           IL +   + +EE       +   T+  +    N L+QV    +R ++    ++ +EW  P
Sbjct: 484 ILEIG--ETVEEVVDSLLLTNVTTIHVNILYDNSLIQVHDAGIRHING---KVIHEWVPP 538

Query: 487 PGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEYEISCLDINPIGENPS 545
               +  AT+N +Q++++  GG L+Y EI +   L E     L  E  CL I  + EN  
Sbjct: 539 KNKQIKAATSNCAQIVISLSGGELLYFEIDESHTLVETFRKNLNVETLCLSIQQVQENKL 598

Query: 546 YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL---LCAFE----------G 592
            +   AVG   ++ VR+ S+       +  L   I+P +     +C  E           
Sbjct: 599 RANFLAVGCLDNV-VRLLSIEKEKYFNQ--LSTFILPNNSSAQDICITEMSELGNDKERK 655

Query: 593 ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 652
           + +L   L +G LL  +++  TG LT+     LG + + +     K    +    ++  +
Sbjct: 656 LLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNAALLVLCEKTYL 715

Query: 653 IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683
            Y    K +YS +N   + +   F+S    D
Sbjct: 716 CYVHQGKYIYSPLNYDILEYASSFHSEQCSD 746



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 47/364 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENEPTKGRI 803
            ++++     + I    L+  E   S+ +C         +C  VGT   L  +N       
Sbjct: 884  IKIIHPVNLQTIDKISLEMEEAALSVCACELE----ALHCLIVGTTTSLSLKNRSAPAAA 939

Query: 804  LVFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            L     D   KL L+     +   +    FNG+LLA+I  K+++Y       G ++L  +
Sbjct: 940  LRVYTYDINYKLNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYAL-----GKKKLLKK 994

Query: 862  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            C +     A+  ++  GD I   D+ +S+ +  Y      +   + D    W++  EILD
Sbjct: 995  CEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDANMNTLRLISDDIIPRWITCSEILD 1054

Query: 921  DDIYLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGE 961
                + A+   ++F +R   E A  EE G                   RLE +  +H+GE
Sbjct: 1055 HHTIMAADKFDSVFVLRVPEE-AKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSFHVGE 1113

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVI 1020
             V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR   
Sbjct: 1114 IVTSLQKVKLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEN 1166

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              + G  H  +RS+ +  + V     +DGDL E F  L      +++  +  + +++ ++
Sbjct: 1167 PPLCGREHIFFRSYYHPVQHV-----IDGDLCEQFSSLPYDVQRKVAADLERTPDDILRK 1221

Query: 1081 VEEL 1084
            +E++
Sbjct: 1222 LEDI 1225


>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
          Length = 1355

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 149/618 (24%), Positives = 253/618 (40%), Gaps = 91/618 (14%)

Query: 266  SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
            +R L     G  H+L  T + E       E +  T     + ++ N ++      GD  +
Sbjct: 403  ARLLFCLDDGEFHILEFTLDVEGAKLYTFEYIDRTLPCRPLFWMKNRMIIGFVEMGDGMI 462

Query: 326  IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNG 385
             KL  +     S ++      N+ PI+D  + D   + Q Q+  C G   +GSLR++RNG
Sbjct: 463  FKLGHRRLLHKSTIQ------NVAPILDLAIADYHGEKQDQMFACCGMSPEGSLRVLRNG 516

Query: 386  IGINEQASVE--LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443
            + ++     E   QG+ G+W+LR    D + +FLV+SF+ ETRIL++ L    + ++  G
Sbjct: 517  VNVDRLLKTEAIYQGVTGLWTLRMKATDAYHSFLVLSFVEETRILSVGLSFN-DISDAVG 575

Query: 444  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST----------SRELRNEWKSPPGYSVNV 493
            F     TL C     N LVQ+ S  V++   T          +  +  +W   P  +++V
Sbjct: 576  FQPDVCTLACGLVADNLLVQIYSKGVKVCLPTVYAHPEGAPLTSPICTDWY--PAITISV 633

Query: 494  ATANASQVLLATGGGHLVYLEIGDGI---------LTEVKHAQLEYEISCLDI---NPIG 541
                 + V++AT     +Y+    G+         L    H QL+YE+SC+ I   + I 
Sbjct: 634  GAVGHNIVVVATSNPCCLYVL---GVRSSSSYQYELYATHHVQLQYEVSCISIPQEDCIH 690

Query: 542  ENPSYS------------------QIAAVGMWTDISVRIFSLPD---LNLIT------KE 574
            +N S+S                  + A +G     SV I SL     L ++T        
Sbjct: 691  DNVSFSCGEGDDICKNPPPKVNVCKFAVIGTHRP-SVEIISLEPGEALRVLTIGTVSVNN 749

Query: 575  HLGGEI---IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMK---TGELTDRKKVS---- 624
             LG  +   IP +V   A E   Y+L  L +G LL F    +    G L     +     
Sbjct: 750  ALGAPMSGCIPENVRFVAAERF-YILAGLRNGMLLRFESETRDYLPGFLYKDSSIPSVNT 808

Query: 625  ---------LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 675
                     +G  P+ L          +   SDRP +++++   L YS+++    SH+ P
Sbjct: 809  FLQLISIRRIGITPVLLVPIHDSANADIIVLSDRPWLLHAARHSLAYSSISFLSASHVTP 868

Query: 676  FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ 735
             +S   P+ L    E  L +  +   ++L+ +   +G  PR++ +  +SRT  +      
Sbjct: 869  VSSVDCPNGLLFVAESCLHLVELVHGKRLNAQKFSIGGTPRKVLYHNESRTLLVLRTGLN 928

Query: 736  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYV 791
              +  S+   V  +D Q    +S Y  +  E    +      +D           G   +
Sbjct: 929  GASSSSD---VVQVDPQNGVLLSRYKCEPGETAKCMQIAKIGNDQVLIVGTTKSAGRPMM 985

Query: 792  LPEENEPTKGRILVFIVE 809
               E E  KGR++V  +E
Sbjct: 986  SNGEAESIKGRLIVLSLE 1003


>gi|401882870|gb|EJT47110.1| hypothetical protein A1Q1_04103 [Trichosporon asahii var. asahii CBS
            2479]
          Length = 1107

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 204/874 (23%), Positives = 339/874 (38%), Gaps = 170/874 (19%)

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIEL--LGETSIASTISYLDNAVVYIGSSYGDSQLI 326
            LLGD  G   L  +  E E +  +++ +  +G  S  S+++YLDN  ++  S+ GDS L+
Sbjct: 291  LLGDEYG--RLTAVGWEFEDMEKVQVGMIDMGVVSAPSSLTYLDNGYLFSASACGDSLLV 348

Query: 327  KLNL-------QPDAKG----------------------SYVEVLERYVNLGPIVDFCVV 357
             L L       QP  KG                        V+V ER++N+ P  DF +V
Sbjct: 349  YLVLPSPNSTRQPSGKGKEKAHDISDAGAYEIVTAEPQHGRVDVRERWMNIAPAKDFAIV 408

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTF 416
              +      VV  SG+    S R+VR+G+G     ++E + GI+ MW++ ++ D P    
Sbjct: 409  KEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIPGIERMWTIPAA-DGPS--- 464

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            L+VSF   T IL   +E E+   +     +   T        + L+QVT   +RL S  +
Sbjct: 465  LMVSFAYSTTIL--QIEPEVSVFKAADQVTAVPTFAAGLVDKSLLLQVTPEGIRLWSDLA 522

Query: 477  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLD 536
              +          + NV     +++  A   G++      DG +T  + +          
Sbjct: 523  AGM---------LAGNVDAPEDNRIATANVRGNIAVAAFRDGTVTLFRASSQ-------- 565

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGI--- 593
                G         A+  W           +++L+  E      + +S+   A+      
Sbjct: 566  ----GLQEVVKGFLAIADWCG---------EIDLVAVEGADQGTVLKSIREAAYATSLQF 612

Query: 594  -------SYLLCALGDGHLLNFLLNMKTGELTD-RKKVSLGTQPITLRTF--SSKNTTHV 643
                   + LL  L DG  +++ + +   E +D R   SLG +P+ L     S     HV
Sbjct: 613  QESNNEPTRLLAGLSDGTFVSYSVKLNGAECSDSRHASSLGLRPLRLIALDISPNAEEHV 672

Query: 644  FAA--SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 701
             AA  SDR ++++ S     +S+   K +                           +  +
Sbjct: 673  VAAGISDRLSLVFESRDHYEFSSSGKKGI-----------------------VFERLTSL 709

Query: 702  QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES----EMHFVRLLDDQTFEFI 757
            +KL ++++ LG                +     +S   ++    +   V L +  T E +
Sbjct: 710  KKLQVQTLDLGNRSATRVAALPGYNLVVAETVTRSMDHQTGDVLQSSSVELRNATTLELL 769

Query: 758  STYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE----------------PTKG 801
            S + L   E   S+ + +       Y  VGTA     ENE                  +G
Sbjct: 770  SEFQLPEREAVASVNAVTLH--GRKYILVGTAIF---ENEDALEDATLEDVTSFIATNRG 824

Query: 802  RILVFIVEDG---KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 858
            R+L+F + +     L L+      G VY     +G L  A + K+ + +   +     E 
Sbjct: 825  RLLLFQINESAGPSLDLVTSMTFNGPVYDTVVIHGFLAVATSTKVSILRLTTQPPSLEEA 884

Query: 859  QS-ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW---MS 914
             S       H LA+    +   +VVGD M+SI +L    E G I    RD NA+    +S
Sbjct: 885  ASFAFAFETHHLAVVEIDKEKRLVVGDAMRSIIVLSVDPESGDIVGDQRDMNAHLVRCLS 944

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
            AV  ++  + +              ++G T              L E V R + G+L   
Sbjct: 945  AVHDVEPGVMI--------------ADGITP--------AASIGLSEDVTRLQPGTLA-- 980

Query: 975  LPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
             P S  G I    ++  TVNG +GVI  L       L+ LQ N+ K+ KG GGL   +W+
Sbjct: 981  -PVSAEGDILRADLLCTTVNGRLGVIGELGKGSIRTLDDLQRNMNKLYKGPGGL---EWK 1036

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
               N     +   F+DGD ++ F  L  +  D+I
Sbjct: 1037 ESGNMLVPRETVGFIDGDFVQRFSSLDSSLQDKI 1070


>gi|19075704|ref|NP_588204.1| silencing protein Rik1 [Schizosaccharomyces pombe 972h-]
 gi|13124796|sp|Q10426.2|RIK1_SCHPO RecName: Full=Chromatin modification-related protein rik1; AltName:
            Full=Silencing protein rik1
 gi|6016996|emb|CAB57850.1| silencing protein Rik1 [Schizosaccharomyces pombe]
          Length = 1040

 Score =  140 bits (352), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 233/1082 (21%), Positives = 438/1082 (40%), Gaps = 122/1082 (11%)

Query: 32   LIIAKCTRIEIHLLTP-QGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVL 90
            L++ +  +I I+L +   GLQ    +P++  +  +  +RP G  +D+LF+      +  +
Sbjct: 28   LVLLQALKINIYLCSEVHGLQFFTSIPLFSTVKHIRPYRPPGLDRDYLFVVLNDDTYFSI 87

Query: 91   QWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVI-------- 142
             WD +  ++I      V  R+  P +         D R+  + L      +I        
Sbjct: 88   YWDEDYQKVIVDH-PPVRYRVTFPWNRNAKSYCLVDLRMRAIFLSIDEISMICIRILSAE 146

Query: 143  -PFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKD 201
                    +   F        + D+  L   + PT+VVL+ D  D  +V  + + L  K 
Sbjct: 147  ERLKTGRSIDSGFPFSFPVHLIYDMCILNDSSTPTLVVLHSDGLDC-YVTAFLLDLSSK- 204

Query: 202  FVEGPWSQNNLDNGADLLIPVPPPLCGV-----LIIGEETIVYCSANA-FKAIPIRPSIT 255
                     +L  G  L   V P +        L++ E   ++C     F  I    +  
Sbjct: 205  ---------SLGKGIRLFERVKPSMIMPFGKRGLLVFESLFIHCMYRGNFVTINGPCTTY 255

Query: 256  KAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLG--ETSIASTISYLDNAV 313
              +  +      Y++ D  G L  +  +   +    L +E L        ++++ +   +
Sbjct: 256  MHWTPLKGQKMHYIVCDTNGYLFGVYSSILGKNKWSLVMERLPIPPFDFITSLNSIHEGL 315

Query: 314  VYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGA 373
            ++IGS   +S+LI L+   D        ++   NLGPI D  V  L+   +   + C+G 
Sbjct: 316  LFIGSKNSESKLINLSTLKD--------VDSIPNLGPIHDLLV--LKNDIEKSFLVCAGT 365

Query: 374  YKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 433
             ++ SL   ++ + ++     ++ GI     L S  +      L + F SET  +A N++
Sbjct: 366  PRNASLIYFQHALKLDILGQTKISGILRAMVLPSYPEHK----LFLGFPSET--VAFNIK 419

Query: 434  DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 493
            ++ +  E++   S  +          + VQVTS  + +  S  R      +       N 
Sbjct: 420  EDFQ-LELDPSLSTKERTIALSGTNGEFVQVTSTFLCIYDSAKRSRLVYIEK----ITNA 474

Query: 494  ATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 553
            A       ++  G    ++ +      TEV     E EISCLD +      +  QI  VG
Sbjct: 475  ACYQEYSAIVINGTALAIFKKD-----TEVARKVFESEISCLDFS------AQFQIG-VG 522

Query: 554  MWTDISVRIFSLPDLNLIT-KEHLGGEIIPRSVLLCAFEGI----SYLLCALGDGHLLNF 608
             W+   V I +  D + I+         +PR+++L   EG+    + LL + G G   ++
Sbjct: 523  FWSK-QVMILTFSDNSSISCAFQTNVPSLPRNIIL---EGVGVDRNLLLVSSGSGEFKSY 578

Query: 609  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 668
            +L       ++ K    GT P++ R F+    T++   +D P ++Y  N  L Y  +++ 
Sbjct: 579  VLFKNNLVFSETKH--FGTTPVSFRRFTMNIGTYIICNNDCPHMVYGFNGALCYMPLSMP 636

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP-RRICHQEQ--SR 725
            +   +C F   +  D L     G L    ++ + +L  R + L   P + I  Q +   R
Sbjct: 637  QSYDVCQFRDNSGKDFLISVSLGGLKFLQLNPLPELTPRKVLLEHVPLQAIIFQNKLLLR 696

Query: 726  TFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 785
            T        +S  E   +  V   DD +F   S    +  E    I   S          
Sbjct: 697  TLENRYEDYESYKENYHLELVDSYDDNSFRVFSFTENERCEKVLKINESSL--------L 748

Query: 786  VGTAYVLPEENEPTKGRILV--FIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            VGT+ +  ++  P  GR+++  F  E   L++++      AV  L  +N + + A  Q++
Sbjct: 749  VGTSIIEQDKLVPVNGRLILLEFEKELQSLKVVSSMVLSAAVIDLGVYNDRYIVAFGQQV 808

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
             + K     +    + S       +L L V+  G+ I + D +   +++ +  ++  +  
Sbjct: 809  AIVKLT---EERLMIDSRISLGSIVLQLIVE--GNEIAIADSIGRFTIMYFDGQKFIVVA 863

Query: 904  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFV 963
            R   +  N + A  + +  +Y+ A N+  L  +R N +     +R   E V  YHL + V
Sbjct: 864  RYL-FGENIVKAA-LYEGTVYIIATNSGLLKLLRYNKDAKNFNDRFICESV--YHLHDKV 919

Query: 964  NRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV-I 1020
            ++F++       P ++      P ++F T  G IG I SL  ++ L LE+L   +RK+  
Sbjct: 920  SKFQN------FPITNTNSFLEPKMLFATEIGAIGSIVSLKDKE-LELEELTRKIRKLKF 972

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              +  +++E       E   +    F+DGDL+   +D+ R    E+ +        LC+ 
Sbjct: 973  SYLSSMDYESI-----EADLISPVPFIDGDLV---IDVKRWASSELFR--------LCRS 1016

Query: 1081 VE 1082
            VE
Sbjct: 1017 VE 1018


>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum NZE10]
          Length = 1223

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 274/1219 (22%), Positives = 481/1219 (39%), Gaps = 213/1219 (17%)

Query: 35   AKCTRIEIHLLTPQG------LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFC 88
            A+   I +H +T         +  +LD  ++G +  +  FR  G + D L ++++  +  
Sbjct: 43   ARGQHISLHRITENADRTERKVTTVLDQNVFGIVRGVTAFRIPGTSTDQLIVSSDSGRVA 102

Query: 89   VLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLH-------LY------ 135
            V+ +DAE +      +        R T  GQ    D   R I L        +Y      
Sbjct: 103  VVNYDAEKNRFNKVHLETYGKSGVRRTIPGQYLASDTRGRCIMLASAEKNKVVYMMNRNA 162

Query: 136  DGLFKVIPFDNKGQLKE------AFNIRLEE--LQVLDIKFLYGCAKPTIVVLYQDNKDA 187
            DG  ++       Q         A +   E      L++ +    + PT  +     K  
Sbjct: 163  DGTIQISSPHEANQWGSLCFAVCALDTGWEPPVFAALEVDYTEAESDPTGTM---HEKRE 219

Query: 188  RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP---PPLCGVLIIGEETIVY-CSAN 243
            + +  Y V L     V+  WS + +D  A+++  VP       GVL+  E+ I Y    N
Sbjct: 220  KQLVYYTVDLGLNHVVKS-WS-DTVDYTANMIFGVPGGQDGPSGVLVCAEDRIYYRHDKN 277

Query: 244  AFKAIPI--RPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHE------KEKVTGLKIE 295
            A  +IPI  R   T+     D +  R ++   AG LHL    HE       E     K+ 
Sbjct: 278  ASLSIPIPRRKGSTE-----DPNRKRTIV---AGCLHLAKTRHEFFFLLQTEDGDVFKLS 329

Query: 296  L-LGETSIASTIS--------YLDN------------AVVYIGSSYGDSQLIKLN----- 329
            + +GE +   T S        Y D               +Y+ +  G+SQL  ++     
Sbjct: 330  MAMGEDAQGRTTSNPERIILKYYDTFPVARQMLLHKKGYLYVATENGNSQLFHIDDLADD 389

Query: 330  LQPDAKGSYV------EVLERY-------------------VNLGPIVDFCVVDLERQGQ 364
            L+ +   ++       E  +RY                     L P++   V +L  +  
Sbjct: 390  LEFEPHNTFTSDDISPEPGDRYEPMYFQPRELTMTHLAVDIPGLHPLLKTKVDNLTNEDA 449

Query: 365  GQVVTCSGAYKDGSLRIVRNGIGI-----NEQASVELQGIKGMWSLRSSTDDPFDTFLVV 419
             Q+    G       + +R+G+ +     N   +V    I   W+ +  + D    +L++
Sbjct: 450  PQIYAIQGTGNKSQFKTIRHGLDVEVLINNSMGNVPYDNI---WTFKHRSSDDHHKYLLL 506

Query: 420  SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
            S       +A ++ D +E+ E   F     T+         LVQV +  +R +  +    
Sbjct: 507  SSSYGDLTIACSIGDSVEQIESSPFLENRATVHAQQMGDATLVQVHARGIRSILESG--A 564

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKH-AQLEYEISCLDI 537
             NEW+SP   +V VA+AN  Q+LLA     L +  +G DGIL +++   ++  +I+ L +
Sbjct: 565  HNEWQSPAHRTVVVASANERQLLLALSSAELAFFFMGDDGILNQLEEMPEMSGKITALSV 624

Query: 538  NPIGENPSYSQIAAVGMWTDISVRIFSLP-DLNLITKEHLGGEIIPRSVLLCAFEG---- 592
                     ++ A VG   D ++R+ S+  D  L  +       IP S+ +         
Sbjct: 625  GQTPRGRQQARYAVVGC-DDCTIRVLSIELDSPLEPRSVQALSAIPTSLEVVEMLDPASN 683

Query: 593  --ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 650
              ++ +   L  G  L  +++  TGEL D +   LGTQP  L      +   + A S RP
Sbjct: 684  TIVNVVHIGLQSGLYLRAIIDETTGELGDVRTKFLGTQPPRLCPVEVNDQDCILACSSRP 743

Query: 651  TVIYSSNKKLLYSNVNLKEVSHMCPFNSA-AF--PD--SLAIAKEGELTIGTIDDIQ-KL 704
             + ++  +  LY+   L       P N+A +F  PD   L   +   L I T+  I+ +L
Sbjct: 744  WLGFNHPQNNLYTVTPLITE----PINAARSFISPDLSGLCAIQGSSLLIFTVPSIEGRL 799

Query: 705  HIRSIPLGEHPRRICHQEQSRTFAIC-------------SLKNQSCAEES-----EMHF- 745
               +I L   PR +        + I               L+ +S  E+      E H  
Sbjct: 800  SHSTIDLNYTPRSMTRNPWYPIWYIAESDGNALSKATRDQLRGKSIEEDEGATALEKHLG 859

Query: 746  -----------VRLLDDQTFE-FISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTA-YV 791
                       ++ +D  T    +ST  L   E        +F S D  V+  VGT  ++
Sbjct: 860  LPRGVQHWASCIQAVDPVTKNAVVSTVELAENEAALCCTCVAFESRDWEVFLAVGTGQHM 919

Query: 792  LPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY--- 846
             P       G + ++ +VEDG KL+ + + +    VY++ AFNG+L   +  ++ +Y   
Sbjct: 920  QPGTGVQAVGYVHIYKLVEDGTKLEFVHKTKFDLPVYTVLAFNGRLALGVGNELFIYDMG 979

Query: 847  -KWMLRD-DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             K MLR   GT            I++L  Q  G+ IV GD+ + I+ ++YK +   +   
Sbjct: 980  IKAMLRKARGT-------ATPNQIVSLEAQ--GNRIVCGDVSEGITYVVYKPKFNRMIPF 1030

Query: 905  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------------ 949
              D    W +   ++D +   G +   NL+ VR   + S+ A +E  G            
Sbjct: 1031 VDDVVQRWTTCTTMVDYETAAGGDKFGNLWVVRCPEQPSQEADEEGAGGFIMNERSYLNG 1090

Query: 950  ---RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQ 1005
               RL++   Y   +     +  +LV        G    + +  + G +G++   +  E 
Sbjct: 1091 APYRLDLRAHYFCQDIPTSMQRTALV-------AGGQELLFWSGLQGTLGMLVPFVTRED 1143

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE 1065
              F  +L+  +R     + G +H  +RS+      V  K  +DGDL E F+ LS     +
Sbjct: 1144 VEFFTQLEQQMRAEDPPLAGRDHLMYRSY-----YVPVKGVIDGDLCERFMHLSYDGKQK 1198

Query: 1066 ISKTMNVSVEELCKRVEEL 1084
            I+  ++  V+E+ K+++E+
Sbjct: 1199 IAAEVDRGVKEIEKKIQEM 1217


>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
          Length = 1212

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 176/374 (47%), Gaps = 12/374 (3%)

Query: 351 IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSST 409
           I D    DL  +   QV    G     SLR++R+G+ ++E A  EL G    +W++R   
Sbjct: 415 ITDVYCGDLAGEEAPQVYALCGKGHRSSLRVLRHGVAVSEMAVSELPGRPSAVWTVRGRH 474

Query: 410 DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
           D+P+D ++VVSF + T +L++   + +EE    GF +   TL       N L+QV    +
Sbjct: 475 DEPYDKYIVVSFTNATLVLSIG--ETVEEVTDSGFLATAPTLDVALLADNALLQVHGEGI 532

Query: 470 RLVSSTSRELR-NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQ 527
           R V     +LR +EWK+P   ++  A AN  QV  A  GG ++Y E+   G L E+   +
Sbjct: 533 RHVRG---DLRISEWKTPGRKAIEKAAANERQVAAALAGGEVIYFELDASGALAELGTKE 589

Query: 528 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 586
           L  E++CLD+  +    + +   A+G W D S+R+ SL PD  L+    +       SV 
Sbjct: 590 LGVEVACLDVGVVPAGRARAPFLALGGW-DGSLRLLSLAPDELLVQVATMQLGARAESVR 648

Query: 587 LC-AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 645
            C   +G   +   L +G L    ++  TG+L D +   LG++ + L          + A
Sbjct: 649 FCETPDGRLGVAAGLANGVLQRAAVDASTGQLGDARARFLGSRAVRLFRVDVGGAPGLLA 708

Query: 646 ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKL 704
            S R  + Y+   +L  + ++   + H   F S   P+ +       L I   D + +  
Sbjct: 709 LSSRAWLCYAHAGRLETAPLSYDALEHAAGFKSEQCPEGVVAIAGSTLRIFVPDKLGETF 768

Query: 705 HIRSIPLGEHPRRI 718
           +  ++PL   PRR+
Sbjct: 769 NQSALPLRYTPRRL 782


>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
           distachyon]
          Length = 1356

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 205/464 (44%), Gaps = 74/464 (15%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 404
           N+GPI+D  + D   + Q Q+ +CSG   +GSLR++RNGI + +    E   QG+ G+W+
Sbjct: 478 NVGPILDLAIADYHGEKQDQMFSCSGMCPEGSLRVIRNGINVEKLLRTEPIYQGVTGLWT 537

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           LR    D + +FLV++F+ ETRIL++ L    + ++  GF     TL C       LVQ+
Sbjct: 538 LRMKRTDMYHSFLVLAFVEETRILSVGLSFN-DISDAVGFQPDVCTLACGLIADGVLVQI 596

Query: 465 TSGSVRLVSSTSRELRN--EWKSP------PGYSVNVATANASQVLLATGGGHLVY---- 512
            S  V+L   T+          SP      P  +++V     + V +AT     +Y    
Sbjct: 597 HSKGVKLCLPTAYAHPEGAPLTSPVCVDWYPDVTISVGAVGHNIVAVATSNPCCLYILSV 656

Query: 513 --LEIGDGILTEVKHAQLEYEISCLDI-------NPIGENPSYSQIAAVGMWTDISVRIF 563
             L      L E++H QL YE+SC+ I       +P+    ++ +     +   + VR+F
Sbjct: 657 RPLSSFQYELYEIQHVQLRYEVSCISIPEEDSRRSPVAVRRAFGRGKRNNLPAKVDVRMF 716

Query: 564 SL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGISYLLC 598
           ++     P + +I+ E                   G  +   IP SV   A E   Y+L 
Sbjct: 717 AVIGTHKPSVEVISLEPGEAFMLLSIGSISVNNSFGAPVSGRIPESVRFVASERF-YILA 775

Query: 599 ALGDGHLLNFLLNMKTGE---LTDR--KKVS---------------LGTQPITLRTFSSK 638
            L +G LL F    +T E   L D   K+ S               +G  P+ L   S  
Sbjct: 776 GLRNGMLLRF--ESETSEEHYLPDSFYKESSTHSVNTLLQLIAMRHIGITPVGLVPLSDS 833

Query: 639 NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 698
             + +   SDR  ++++S   L YS+++    SH+ P +S   P  L    E  L +  +
Sbjct: 834 ANSDIILLSDRSWLLHASRHSLAYSSISFLPASHVTPVSSMDCPSGLLFVAENCLHLVEM 893

Query: 699 DDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEE 740
              ++L+ + + +   PR++ +   SRT  +    L   SC+ +
Sbjct: 894 VHGKRLNAQKLSIEGTPRKVLYHSDSRTLLVMRTGLTGASCSSD 937


>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1223

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 228/1017 (22%), Positives = 412/1017 (40%), Gaps = 176/1017 (17%)

Query: 207  WSQNNLDNGADLLIPVP-----PPLCGVLIIGEETIVYCSANAFK-AIPI--RPSITKAY 258
            WS+  +D  A++LI VP     P   GVL+  E+ I Y    A   AIPI  R   T+  
Sbjct: 238  WSEP-VDYSANMLIGVPGGQNGP--SGVLVCCEDRIYYKHDKAASLAIPIPRRKGATE-- 292

Query: 259  GRVDADGSRYLLGDHAGLLHL--------LVITHEKEKVTGLKIELLGETSIAST----- 305
               D +  RY++   A  LHL         ++  E   V  L I +  +     T     
Sbjct: 293  ---DPNRKRYIV---ASCLHLAASRKEFFFLLQTEDGDVFKLNITMAVDAQGRQTADPEQ 346

Query: 306  --ISYLD------------NAVVYIGSSYGDSQLIKLN------------------LQPD 333
              + Y D               +YI +  G+SQL  ++                  + PD
Sbjct: 347  IILKYYDTFPIAKQMLLHKKGFLYIATENGNSQLYHVDDLADDLEFEPHNNFTSDGVSPD 406

Query: 334  AKGSY------------VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 381
               +Y              +      L P++   V +L  +   Q+    G       + 
Sbjct: 407  PAEAYEPTYFQPRELTMTHLAVDVPGLHPLMRTKVDNLTGEDAPQIYGIQGTGNKSLFKT 466

Query: 382  VRNGIGI-----NEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
            +R+G+ +     N   +V   GI   W+ +  + D    +L++S       +A ++ D +
Sbjct: 467  IRHGLDVEIMIDNNMGNVPYDGI---WTFKHRSSDEHHKYLIISSSYGDLTVACSIGDSV 523

Query: 437  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 496
            E+ E   F     T+       + LVQV +  +R +  T     NEW +PP  +V  A+A
Sbjct: 524  EQIENSPFLENRATVHAQQMGDSTLVQVHARGIRSILETG--AFNEWPTPPHRTVAAASA 581

Query: 497  NASQVLLATGGGHLVYLEIG-DGILTEVKH-AQLEYEISCLDINPIGENPSYSQIAAVGM 554
            N  Q+LLA     L +  +G DGIL +++   ++  +I+ + +    +    ++ A VG 
Sbjct: 582  NERQLLLALSSAELAFFFMGEDGILIQLEEMPEMSGKITAISVGQTPKGRQQAKYAVVGC 641

Query: 555  WTDISVRIFSLP-DLNLITKEHLGGEIIPRSV----LLCAFEGISYLLCALG--DGHLLN 607
              D ++R+ S+  D  L  +       +P S+    +L    G +  +  +G   G  L 
Sbjct: 642  -EDCTIRVLSIELDSPLEARSVQALSAVPTSLEVVEMLDPASGTTVNVVHIGLRSGLYLR 700

Query: 608  FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 667
             +++  TGEL D +   LGT+P  L          V A S RP + Y+  +  LY+   L
Sbjct: 701  AIIDETTGELGDVRTKFLGTKPPRLCPVEVDGEDCVLACSSRPWLGYNHPQSKLYTVTPL 760

Query: 668  --KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQS 724
              + +     F+S       AI +   L I +I  I+ +L   S+ L   PR +      
Sbjct: 761  IAEPMEAARSFSSPELKGLCAI-QGSSLLIFSIPSIEGRLSHSSVSLQYTPRSMTRNPWY 819

Query: 725  RTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTY------------------PLDT 764
              + +   +    S A   ++    + DD   + +  +                  P+  
Sbjct: 820  PLWYVAQSEGNTLSQATRDQLRGKSIGDDDEAKAMERHLGLPRGNGHWASCIQAVDPIGG 879

Query: 765  FEYGCSI--------LSCSF----SDDSNVYYCVGTA-YVLPEENEPTKGRILVF-IVED 810
             E  C+I        LSC+     S +  VY  VGT  ++ P     T G + ++ +++D
Sbjct: 880  REVTCTIELGENEAALSCACVAFESKNWEVYLAVGTGQHMQPGTGVQTAGYVHIYKLLKD 939

Query: 811  G-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH---HG 866
            G +L+ + + + +  VY+L  F G+L   +  ++ +Y     D G + L  +  +     
Sbjct: 940  GAELEFVHKTKFELPVYALMPFRGRLALGVGNELFIY-----DMGMKALLRKARNIAVPN 994

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
             I++L  +++G+ I+ GD+ + ++ L+YK     +     D    W +   ++D +   G
Sbjct: 995  QIVSL--ESQGNRIICGDVSEGVTYLVYKPTFNRLIPFVDDTVQRWTTTTTMVDYETAAG 1052

Query: 927  AENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYHLGEFVNRFRH 968
             +   NL+ VR   + S+ A +E  G               RL++   Y   +     + 
Sbjct: 1053 GDKFGNLWIVRCPEQPSQEADEEGAGGYIMNERSYLNGAPYRLDLRAHYFCQDIPMSMQR 1112

Query: 969  GSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
             +LV        G    + +  + G +G+ I  +  E   F   L+  +R     + G +
Sbjct: 1113 TALV-------AGGQEVLFWSGLQGTLGILIPFVTREDVEFFTALEQQMRTEDPPLAGRD 1165

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            H  +RS+      V  K  +DGDL+E F+ LS     +I+  ++ SV+E+ K+V+E+
Sbjct: 1166 HLMYRSY-----YVPVKGVIDGDLLERFMGLSYDTKQKIAAEVDRSVKEIEKKVQEM 1217


>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1206

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 253/1229 (20%), Positives = 476/1229 (38%), Gaps = 181/1229 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNF-TSPQELNLIIAKCTRIEI---HLLTPQGLQPMLDVP 57
            S+  Y +T  KPT    S +G F  + +   L++A  T IE+   HL + + ++ +    
Sbjct: 7    SLHLYHLTLTKPTAAIKSILGQFLDNKKSQELVLATSTSIELWQFHLESGK-IKQICHQQ 65

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
            + G I  ++  R  G   D L I ++  +  +L++D +  +         S      T  
Sbjct: 66   VIGVIQNIDRIRKGGSNLDLLVITSDSGRLSILEFDKDELKFFPVVQEPHSKNGMNRTTP 125

Query: 118  GQIGIIDPDCRLIGLHLYDG---LFKVIPFDNKGQLKEAF-NIRLEELQVLDIKFLYGCA 173
            G+   +DP  R I +   +    ++K    +NK +L     ++    L +  +    G  
Sbjct: 126  GEYLCVDPQDRTITIGAIERDKLMYKAQTNNNKLELLSPLESVSKNTLTIQMVSLDTGYE 185

Query: 174  KPTIVVL------------YQDNKDARHVKTYEV------ALKDKDFVEGPWSQNNLDNG 215
             P +  +            Y        ++ YE         + KD +E P S   L   
Sbjct: 186  NPMLAAIECNYAHYDASLKYDPQSSNLTLQYYEFEQGLNYVARRKDTLEIPSSSTTL--- 242

Query: 216  ADLLIPVPPPLCGVLIIGEETIVY----CSANAFKAIPIR------PSITKAYGRVDADG 265
                +P+P P+ GV++ G   I Y         +  IP+R      P +  A  ++  + 
Sbjct: 243  ----VPLPTPIGGVIVAGSSFIFYHNPTIDQQLYLPIPLRAGSSPVPIVCYAVHKLKKNN 298

Query: 266  SRYLLGDHAGLLHLLVITH--EKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
               LL +  G    ++I +  + EKVT L +      S +++I+      ++   +  D 
Sbjct: 299  FFILLHNELGDCFRVLIDYDDDSEKVTELSVGYFDTISPSTSINVFKKGYLFANVTNNDK 358

Query: 324  QLIKLN--------------------LQPDAKGSYVEVLERYVNLGPIVDF-------CV 356
             L ++                        + K  +     R + L  I+D         +
Sbjct: 359  MLYQIEDLGDNDSYISSSQFSSLEDVFDGNKKHEFKPRGLRNLALVQIIDSSNPCFGGAL 418

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDT 415
            V      + ++   +G      L++  +GI I+   S  L  I   +++ R S +   D 
Sbjct: 419  VKTSESKESRIAMITG---HSHLKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDE 475

Query: 416  FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
            ++V+S  + ++ L + + + +EE +   F +   T+         L+Q+ S  +R +  T
Sbjct: 476  YMVISSSASSKTLVLAIGEVVEEVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQT 535

Query: 476  SRELR-----NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY 530
              E +      +W  P G ++  A+ N  QVL+      L Y EI D    ++   Q   
Sbjct: 536  ETEGKITKKTFDWYPPAGITIISASTNQEQVLIGLSNRELCYFEI-DPTDDQLIEYQERI 594

Query: 531  EISCLDINPIGENPSYSQIA------AVGMWTDISVRIFSLPD---LNLITKEHLGGEII 581
            E+S   I  +    S+   +      A+   TD +V++ SL     L  +T + L     
Sbjct: 595  EMSGGQICALALASSFVNKSQRKSPFALVACTDETVQVISLQQHNCLETLTFQALSANCT 654

Query: 582  PRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
               ++      +++L   L +G  +   L   TG+ +D +   LG   + L   S +   
Sbjct: 655  SAVIISNETSLVAHL--GLENGLYVRSTLESITGKFSDTRVKYLGADSVKLSAISLRQLQ 712

Query: 642  H--VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
               V A S  P + Y S  K   + +    +     F S    + +  A   ELTI TI 
Sbjct: 713  QVGVLAVSTYPWLCYRSKNKTRITPLMGANIKCGTSFYSEEIGEGIVGASASELTIFTIG 772

Query: 700  DIQ---------KLHIRSIPLGEHPRRICHQEQSRTFAICS-----LKNQSCAE------ 739
            + +         +L I  I L   P ++  ++Q+  F I S     L  QS  E      
Sbjct: 773  EDEDNSEMSIEDELAIEDIRLRYSPTKMILEDQT-AFVIESEYGVVLPYQSGEEVDSDYY 831

Query: 740  ---------ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY 790
                     ES    V++LD ++ +   +  L+  +   S+   +F +    Y  VGTA 
Sbjct: 832  SAFGYLRKDESWASCVQILDLESKKITFSTELEDNQKPLSLCRMNFGNQK--YLMVGTAK 889

Query: 791  VLP-EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY--- 846
             L  + N   K +I+ F++   +L+L+   E      ++  F GKLL  + + ++LY   
Sbjct: 890  DLTFQLNNNPKYKIITFLINGSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELG 949

Query: 847  -KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 905
             K +LR   T        +   I+ +  Q +   IVVGD   S + L Y   +      A
Sbjct: 950  KKQLLRKSSTL-----VDYLTKIVQITHQGKQR-IVVGDGSNSTTFLKYDSLDNIFVSFA 1003

Query: 906  RDYNANWMSAVEILDDDIYLGAENNFNLFTVR----------------KNSEGATDEERG 949
             D     ++A+E LD D  +G +   N+F  R                K  +   +    
Sbjct: 1004 DDVMKRHITALECLDHDTVIGGDKFGNVFVNRIPFTLSKQADQEWSLVKYQDHYLNSAGN 1063

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE-QYLF 1008
            RL+ + E+ L +    F  G+LV        G   ++ +  + G +G    L  + +  F
Sbjct: 1064 RLKGLCEFFLQDIPTLFFKGTLV-------TGGKESIFYTGLCGSLGFFEPLISKLEVSF 1116

Query: 1009 LEKLQTNLRKVIK-------------GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
               L+ ++RKV+               + G +  ++R + N       KN +DGD +E +
Sbjct: 1117 FTALENSIRKVLDPNLEEHDKKRLYCQLLGKDQLKFRGYYNP-----VKNVIDGDFVEYY 1171

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +L      +I+  ++ +  ++ +++ ++
Sbjct: 1172 FELDPRTKTKIATELDRTPRDIERKIADI 1200


>gi|124359136|gb|ABD32504.2| CPSF A subunit, C-terminal; WD40-like [Medicago truncatula]
          Length = 632

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 161/647 (24%), Positives = 279/647 (43%), Gaps = 80/647 (12%)

Query: 481  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINP 539
            NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P
Sbjct: 18   NEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAP 77

Query: 540  IGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLC 598
            + E    S+  AVG + D ++RI SL PD  + T   LG + +  +     F  +     
Sbjct: 78   VPEGRQRSRFLAVGSY-DKTIRILSLDPDDCMQT---LGIQSLSSASESLLFLEVQ---- 129

Query: 599  ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 658
               +G L   +++M TG L+D +   LG +P  L     +    +   S RP + Y    
Sbjct: 130  -ASNGVLSRTVVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRAMLCLSSRPWLGYIHQG 188

Query: 659  KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRR 717
              L + ++ + +     F+S    + +       L I TI+ + +  +   IPL   P +
Sbjct: 189  HFLLTPLSYETLEFAASFSSDQCVEGVVALAGEALRIFTIERLGETFNETVIPLRYTPMK 248

Query: 718  ICHQEQSRTFAIC-SLKNQSCAEESEM--------------HF-------------VRLL 749
               Q + +   +  S +    AEE E               H+             +R+L
Sbjct: 249  FVLQPKRKLLVVIESDQGAFTAEEREAAKKDEDKDDPLSDEHYGYPKAESDKWASCIRIL 308

Query: 750  DDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL--PEENEPTKGRILVF 806
            D +T        L   E   S  + +F D +      VGTA  L        T G I ++
Sbjct: 309  DPKTGNTTCLLELQDNEAAFSGCTVNFHDKEYGTLLDVGTAKGLQFTPRRSLTAGFIHIY 368

Query: 807  -IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
              +EDG+ L+L+ + + +G   +L+ F G+LLA I   ++ Y     D G R L  +  +
Sbjct: 369  RFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFY-----DLGKRRLLRK--Y 421

Query: 865  HGHILA---LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 921
               +     + +QT  D I VGD  +S     Y+ +E  +   A D    W++A   +D 
Sbjct: 422  ENKLFPNTIVSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDF 481

Query: 922  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 981
            D          +    K  +G  +    ++E + ++H+G+ ++  +  SL+        G
Sbjct: 482  DTMAEDPTGGRI----KWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLI-------PG 530

Query: 982  QIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 1040
                ++ GTV G IG + A    +   F   L+ ++R+    + G +H  +RS       
Sbjct: 531  GGECILNGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----AY 585

Query: 1041 VDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEE 1083
               K+ +DGDL E F    +DL R   DE+ +T      E+ K++EE
Sbjct: 586  FPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTRG----EILKKLEE 628


>gi|300176205|emb|CBK23516.2| unnamed protein product [Blastocystis hominis]
          Length = 702

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 151/624 (24%), Positives = 268/624 (42%), Gaps = 64/624 (10%)

Query: 488  GYSVNVATANASQVLLATGG-GHLVYLEIGD-GILTEVKHAQLEYEISCLDINPIGENPS 545
             +   V  A ++   LA G    L  L +G  G  + +       EIS L +    E+  
Sbjct: 57   AFPAAVQLAASAGRFLAVGSFARLDVLRLGAAGEASALGSVSFAEEISALAVWEREED-- 114

Query: 546  YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP--RSVLLCAFEGISYLLCALGDG 603
               +  VG W   SVRI           E + G +    +S++     G   LL +L  G
Sbjct: 115  --VVVGVGEWISGSVRILRFGKEGGERGERVEGALASTVKSMMFVEQNGELLLLTSLVTG 172

Query: 604  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 663
             +   +L ++    +  K+  + + P T     S +             +Y  N     +
Sbjct: 173  EVA--ILQIRDDAWSIVKQFHVSSLPGTW--VRSNDPDSFLLVGPESCFLYHRNTSWFMA 228

Query: 664  NVNLKEVSHMCPFNSAAFPDS------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRR 717
             ++      +C  + A+ PD          A+   L++G IDD++ +H   IPL  +   
Sbjct: 229  PLD---SPPLC--SCASLPDEHEHRFFFVSARSSALSLGEIDDVRSVHAARIPLQHNLLA 283

Query: 718  ICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC-----SIL 772
            +  Q  +++  +   +  +    +    ++L D +T+      PL   E        SI 
Sbjct: 284  LSVQPATQSLLLLLSRAAASQNAA---LLQLRDPKTYAIRDELPLKPSEIALCVASGSIF 340

Query: 773  SCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 832
              S + + N  + VGTA+VLPEENEP++GR+LV    + +L+L+AE    G   S+  F 
Sbjct: 341  PLSNAPERNEVFVVGTAFVLPEENEPSQGRLLVLRAVEHRLELVAETMLSGGCLSICLFK 400

Query: 833  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
            GK++  +N ++Q++    +     +L SE      + +L      + I +GD++ S+  +
Sbjct: 401  GKVVCGVNSELQVFDVDEKTSTISKLASEVACIS-VTSLSPNEADETIALGDILYSV--V 457

Query: 893  IYK-------------HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
            +YK              E  A E R RD  A  +  +     ++ +G +   NL  ++  
Sbjct: 458  VYKLVLEVVRGRQLAQLECIASERRRRDVTA--LERLPEAQSEMVVG-DAYGNLMVMQVV 514

Query: 940  SEGATDEERGRLEVVGE--YHLGEFVNR------FRHGS----LVMRLPDSDVGQIPTVI 987
             E   D    +  VV +  +HL + +NR      FR G+       R  +S++     + 
Sbjct: 515  EEADLDRSNPQKIVVTKESFHLDDQINRFVPVQLFRSGAEDKKKEKRAEESEIAF--NLA 572

Query: 988  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
            F TV+G IG+I +L   ++  L  ++T +  VI  VGGL+H+QWR  N      +    +
Sbjct: 573  FATVSGRIGMIGALNDREFRMLRAIETAMENVITPVGGLDHKQWRCSNTPFGIKNLAYCI 632

Query: 1048 DGDLIESFLDLSRTRMDEISKTMN 1071
            DGDL+E FL+L      +I+ +++
Sbjct: 633  DGDLVEMFLELDDESQAKIADSVS 656


>gi|218199276|gb|EEC81703.1| hypothetical protein OsI_25307 [Oryza sativa Indica Group]
          Length = 1429

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 145/609 (23%), Positives = 254/609 (41%), Gaps = 92/609 (15%)

Query: 275  GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA 334
            G  HLL  + + E V  L  E +        + ++D  +V      GD  +++L      
Sbjct: 414  GEFHLLEFSLDMEGVKVLP-ECVHRGLPCKPLLWMDKGMVVGFVEMGDGMILQLENNRLV 472

Query: 335  KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
              S ++      N+ PI+D  + D   + Q Q+  C G   +GSLR++RNG+ + +    
Sbjct: 473  HKSAIQ------NVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRT 526

Query: 395  E--LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF 452
            +    G+ G+W+LR    D + +FLV+SF+ ETRIL++ L    +  +  GF +   TL 
Sbjct: 527  DPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFN-DICDAVGFQTDVCTLA 585

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVL 502
            C       LVQ+ S  V+L   T+            +  +W   P  +++V     + V+
Sbjct: 586  CGLVADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWY--PDVTISVGAVGHNVVV 643

Query: 503  LATGGGHLVYLEIGDGI------LTEVKHAQLEYEISCLDINPIG---ENPSYSQIAAVG 553
            +AT     +Y+     +      L E++H QL YE+SC+ I       +N S S   +  
Sbjct: 644  VATSNPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSCATSGD 703

Query: 554  MWTDIS--VRIFSL-----PDLNLITKE-----------------HLGGEI---IPRSVL 586
               D +  +R F++     P +++I+ E                  LG  I   IP +V 
Sbjct: 704  FRKDFAANIRKFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVR 763

Query: 587  LCAFEGISYLLCALGDGHLLNFLLNMKTGEL----------TDRKKVSL--------GTQ 628
              A     Y+L  L +G LL F      G            T     SL        G  
Sbjct: 764  FVAAARF-YILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGIT 822

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ L     +    +    DRP +++S+   L YS+++    SH+ P +S   P+ L   
Sbjct: 823  PVVLVPLHDRANADIIVLGDRPWLLHSARHSLAYSSISFLPASHVTPVSSTDCPNGLLFV 882

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMHFV 746
             E  L +  +   ++L+ +   +G  PR++ +   SRT  +    L + SC+ +     +
Sbjct: 883  SENCLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSD-----I 937

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-ENEPTK 800
              +D      +S +  +  E    +      +D  +   VGT+      ++P  E E  K
Sbjct: 938  VQIDPSNGALLSRFKCEPGETAKCMQIAKIGNDQVLI--VGTSKSNGRPMMPNGEAESIK 995

Query: 801  GRILVFIVE 809
            GR+++  +E
Sbjct: 996  GRLILLSLE 1004


>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1206

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 247/1228 (20%), Positives = 469/1228 (38%), Gaps = 179/1228 (14%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNF-TSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPI 58
            S+  Y +T  KPT    S +G F  + +   L++A  T IE+     +   ++ +    +
Sbjct: 7    SLHLYHLTLTKPTAAIKSILGQFLDNKKSQELVLATSTSIELWQFHSESGKIKQICHQQV 66

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
             G I  ++  R  G   D L I ++  +  +L++D +  +         S      T  G
Sbjct: 67   IGVIQNIDRIRKGGSNLDLLVITSDSGRLSILEFDKDELKFFPVVQEPHSKNGMNRTTPG 126

Query: 119  QIGIIDPDCRLIGLHLYDG---LFKVIPFDNKGQLKEAF-NIRLEELQVLDIKFLYGCAK 174
            +   +DP  R I +   +    ++K    +NK +L     ++    L +  +    G   
Sbjct: 127  EYLCVDPQDRTITIGAIERDKLMYKAQTNNNKLELSSPLESVSKNTLTIQMVSLDTGYEN 186

Query: 175  PTIVVL------------YQDNKDARHVKTYEV------ALKDKDFVEGPWSQNNLDNGA 216
            P +  +            Y        ++ YE         + KD +E P S   L    
Sbjct: 187  PMLAAIECNYAHYDASLKYDPQSSNLTLQYYEFEQGLNYVARRKDTLEIPSSSTTL---- 242

Query: 217  DLLIPVPPPLCGVLIIGEETIVY----CSANAFKAIPIR------PSITKAYGRVDADGS 266
               +P+P P+ GV++ G   I Y         +  IP R      P +  A  ++  +  
Sbjct: 243  ---VPLPTPIGGVIVAGSSFIFYHNPTIDQQLYLPIPSRAGSSPVPIVCYAVHKLKKNNF 299

Query: 267  RYLLGDHAGLLHLLVITH--EKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQ 324
              LL +  G    ++I +  + EKVT L +      S +++I+      ++   +  D  
Sbjct: 300  FILLHNELGDCFRVLIDYDDDSEKVTELSVGYFDTISPSTSINVFKKGYLFANVTNNDKM 359

Query: 325  LIKLN--------------------LQPDAKGSYVEVLERYVNLGPIVDF-------CVV 357
            L ++                        + K  +     R + L  I+D         +V
Sbjct: 360  LYQIEDLGDNDSYISSSQFSSLEDVFDGNKKHEFKPRGLRNLALVQIIDSSNPCFGGALV 419

Query: 358  DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTF 416
                  + ++   +G      L++  +GI I+   S  L  I   +++ R S +   D +
Sbjct: 420  KTSESKESRIAMITG---HSHLKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDEY 476

Query: 417  LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
            +V+S  + ++ L + + + +EE +   F +   T+         L+Q+ S  +R +  T 
Sbjct: 477  MVISSSASSKTLVLAIGEVVEEVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQTE 536

Query: 477  RELR-----NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
             E +      +W  P G ++  A+ N  QVL+      L Y EI D    ++   Q   E
Sbjct: 537  TEGKITKKTFDWYPPAGITIISASTNQEQVLIGLSNRELCYFEI-DPTDDQLIEYQERIE 595

Query: 532  ISCLDINPIGENPSYSQIA------AVGMWTDISVRIFSLPD---LNLITKEHLGGEIIP 582
            +S   I  +    S+   +      A+   TD +V++ SL     L  +T + L      
Sbjct: 596  MSGGQICALALASSFVNKSQRKSPFALVACTDETVQVISLQQHNCLETLTFQALSANCTS 655

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 642
              ++      +++L   L +G  +   L   TG+ +D +   LG   + L   S + +  
Sbjct: 656  AVIISNETSLVAHL--GLENGLYVRSTLESITGKFSDTRVKYLGADSVKLSAISLRQSQQ 713

Query: 643  --VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 700
              V A S  P + Y S  K   + +    +     F S    + +  A   ELTI TI +
Sbjct: 714  VGVLAVSTYPWLCYRSKNKTRITPLMGANIKCGTSFYSEEIGEGIVGASASELTIFTIGE 773

Query: 701  IQ---------KLHIRSIPLGEHPRRICHQEQSRTFAI--------------------CS 731
             +         +L I  I L   P ++  ++Q+  F I                     S
Sbjct: 774  DEDNSEMSIEDELAIEDIRLRYSPTKMILEDQT-AFVIESEYGVVSPYQSGEEVDSDYYS 832

Query: 732  LKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 791
                S  +ES    V++LD ++ +   +  L+  +   S+   +F +    Y  VGTA  
Sbjct: 833  AFGYSRKDESWASCVQILDLESKKITFSTELEDNQKPLSLCRMNFGNQK--YLMVGTAKD 890

Query: 792  LP-EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY---- 846
            L  + N   K +I+ F++   +L+L+   E      ++  F GKLL  + + ++LY    
Sbjct: 891  LTFQLNNNPKYKIITFLINGSELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGK 950

Query: 847  KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
            K +LR   T        +   I+ +  Q +   IVVGD   S + L Y   +      A 
Sbjct: 951  KQLLRKSSTL-----VDYLTKIVQITHQGK-QRIVVGDGSNSTTFLKYDSSDNIFVSFAD 1004

Query: 907  DYNANWMSAVEILDDDIYLGAENNFNLFTVR----------------KNSEGATDEERGR 950
            D     ++A+E LD D  +G +   N+F  R                K  +   +    R
Sbjct: 1005 DVMKRHITALECLDHDTVIGGDKFGNVFVNRIPFTLSKQADQEWSLVKYQDHYLNSAGNR 1064

Query: 951  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFL 1009
             + + E+ L +    F  G+LV        G   ++ +  + G +G    L    +  F 
Sbjct: 1065 SKGLCEFFLQDIPTSFFKGTLV-------TGGKESIFYTGLCGSLGFFEPLISKSEVSFF 1117

Query: 1010 EKLQTNLRKVIK-------------GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 1056
              L+ ++RKV+               + G +  ++R + N       KN +DGD +E + 
Sbjct: 1118 TALENSIRKVLDPNLEEHDKKRLYCQLLGKDQLKFRGYYNP-----VKNVIDGDFVEYYF 1172

Query: 1057 DLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +L      +I+  ++ +  ++ +++ ++
Sbjct: 1173 ELDPRTKTKIATELDRTPRDIERKIADI 1200


>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
 gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
          Length = 1218

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 173/807 (21%), Positives = 340/807 (42%), Gaps = 92/807 (11%)

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK--GMWSL 405
            L P++   V +L  +   Q+    G       + +R+G+ + E  +  +  +    +W+ 
Sbjct: 428  LHPLIKTKVDNLTSEDAPQIYAIQGTGNKSQFKTIRHGLNVEEIINNSMGNVPYDNIWTF 487

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            +  + D F  +L++S       +A ++ D +E+ E   F     T+         LVQV 
Sbjct: 488  KHRSTDEFHRYLLLSSSYGDLTIACSIGDSVEQIENSSFLENRATVHAQQMGDATLVQVH 547

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVK 524
            +  +R +  +     NEW +P   +V VA+AN  Q+LLA     L +  +  DGIL +++
Sbjct: 548  ARGIRSILESG--ALNEWPTPAHRTVVVASANERQLLLALSSAELAFFFMQDDGILVQLE 605

Query: 525  H-AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP-DLNLITKEHLGGEIIP 582
               ++  +++ L +    +    ++ A VG   D ++R+ S+  D  L  +       +P
Sbjct: 606  EMPEMSGKVTALSVGRTPKGRQQAKYAVVGC-DDCTIRVLSIELDSPLEPRSVQALSAVP 664

Query: 583  RSVLLCAFEG------ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
             S+ +           ++ +   L  G  L  +++  TGEL D +   LGT+P  L    
Sbjct: 665  TSLEVVEMHDPSSNSYVNVVHIGLQSGLYLRAVIDETTGELGDVRTKFLGTRPPRLCPVE 724

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNL-------------KEVSHMCPFNSAAFPD 683
              +   V A S RP + Y+  +   Y+   L              ++  +C    ++   
Sbjct: 725  INDQECVLACSSRPWLGYNHPQSQQYTVTPLIAEPIEAARSFISPDLVGLCAIQGSSLLI 784

Query: 684  SLAIAKEGELTIGTID-DIQKLHIRSIPLGEHPRRICHQEQSRTFAIC---SLKNQSCAE 739
                + EG L+  TID +     +   PL  +P     Q    T +      L+ +S  +
Sbjct: 785  MQVPSIEGRLSSSTIDLNYTPRAMDRNPL--YPIWYTAQADGNTLSKAMRDQLRGKSIDD 842

Query: 740  ESEM--------------HF---VRLLDDQTFEFIS-TYPLDTFEYGCSILSCSF-SDDS 780
            + E               H+   ++ +D  T + ++ T  L   E    I    F S   
Sbjct: 843  DEEATALEKHLGVSRGTGHWASCIQAIDPITQKAVTHTIELGENEAALCIACVPFTSRQD 902

Query: 781  NVYYCVGTA-YVLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLA 837
             V+  VGT  ++ P  ++P+ G + ++ ++E+G KL+ +   +    +Y+L  FNG+L  
Sbjct: 903  EVFLAVGTGQHMSPGTSQPSTGFVHIYRLLEEGTKLEFVHRTQFDSPIYALCKFNGRLAL 962

Query: 838  AINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
             +  ++ +Y     D G + L  +  G     L  ++ + G+ ++  D+ +S++ ++YK 
Sbjct: 963  GVGNELFIY-----DMGMKHLLRKARGTAVPNLITHITSVGNRLICADVSESVTYVVYKP 1017

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD-EERG------ 949
                +     D    W +A  ++D +   GA+   NL+ VR     +T+ +E G      
Sbjct: 1018 AFNRLIPFVDDTIQRWTTATALVDYETVAGADKFGNLWVVRCPEATSTEADEDGAGGYIM 1077

Query: 950  -----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
                       RLE+   +   +     +  SLV        G    + +  + G +G++
Sbjct: 1078 NERSYLGGAPYRLELRSHFFANDIPTSLQRTSLV-------AGGAEVIFWSGLQGTLGML 1130

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
               +  E   F   L++ +R+    + G +H  +RS+      V  K  +DGDL E +L 
Sbjct: 1131 VPFVSREDVEFFTALESQMRQEDPPLAGRDHLMYRSY-----YVPVKGVIDGDLCERYLG 1185

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L      +I+  ++ SV+E+ K+V+E+
Sbjct: 1186 LREDVKGKIAAEVDRSVKEVEKKVQEM 1212


>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
           multifiliis]
          Length = 983

 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 175/748 (23%), Positives = 310/748 (41%), Gaps = 117/748 (15%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ----GLQPMLDVPIYGR 61
           Y +T  +PT +  +  GNF+ P+   L +AK   +EI  L+P      L+ +    ++G 
Sbjct: 5   YSLTLLQPTCIVKAIYGNFSGPKAQELAVAKGKILEI--LSPDEETGKLKTVHSEEVFGL 62

Query: 62  IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIG 121
           I T+  FR  G  +D++ I ++  +  +L ++ +  E              R    GQ  
Sbjct: 63  IRTISTFRLPGFKKDYIIIGSDSGRIVILNYNKKKGEFEKLHQETYGKTGCRRIVPGQYI 122

Query: 122 IIDPD---CRLIGLHLYDGLFKVIPFDNKGQLKE---------------AFNIRLEELQV 163
            +DP    C +  L     +F +   ++K  +                   ++  E  Q 
Sbjct: 123 AVDPKGRVCMIAALEKQKFVFILNRENDKLTISSPLEAHKSHTICYDICGIDVGYENAQF 182

Query: 164 LDIKFLYGCAKPTIVVLYQDNKDA--------RHVKTYEVALKDKDFVEGPWSQNNLDNG 215
             I+  YG          +D KD+        + +  YE+       V+   S  N+   
Sbjct: 183 ACIECDYG---------EKDQKDSPMNNGIIQKQLTIYELDFGLNHVVKK--SSENVPES 231

Query: 216 ADLLIPVP---PPLCGVLIIGEETIVYCSANAFK--AIPIRPSI-TKAYGRVDADGSR-- 267
           A LLI +P       GV+I+ E+ ++Y      +    P R S  T +   ++  G    
Sbjct: 232 AHLLISIPGGQEGPGGVVIVCEDFLIYKGTKGERICQFPKRFSADTNSKIMINTFGFHKQ 291

Query: 268 -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                +LL    G L  L I   K+ V  + ++       + +I  + N  ++     G+
Sbjct: 292 KEFFFFLLQTELGDLFKLEIQSTKDDVHSISLQYFDSIPPSISICVMRNGYLFAACEKGN 351

Query: 323 SQLIKL---------NLQPDA-------------KGSYVEVLERYVNLGPIVDFCVVDLE 360
             L +          +++ D+             K   ++ +++  NL  I D  V DL 
Sbjct: 352 HLLYRFKSIGEKEANSVRTDSTQDQKMPVLFIPRKLKNLQQVDQLENLSAISDIKVSDLT 411

Query: 361 RQGQGQVVT-CSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLV 418
            +G  Q+ T CS  Y+  SLRI+R+G+ +NE A+  L G+  G+W+++S  D+ F  +++
Sbjct: 412 GEGHPQIYTLCSAGYRS-SLRILRHGLQVNEVAASRLPGVPTGIWTIKSRYDENFSKYII 470

Query: 419 VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR- 477
           +SF  +T  L +++ D +++    G     QT+  +    N ++QV     R +    R 
Sbjct: 471 LSFSKQT--LVLSISDRVQQVTDSGIDLNKQTIHANLLEDNAIIQVMPDGFRHIRVDKRV 528

Query: 478 -ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCL 535
            +L+ E K      +  A +N  Q+ ++  GG ++Y E+   G L EV    L+ EI C+
Sbjct: 529 QQLKTEGK------IVKAVSNQKQIAISLQGGDIIYFELDYAGQLIEVAKTNLQEEIECM 582

Query: 536 DINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEG 592
           DI  +      S+  +VG  +D SVRI SL +   L  I+ + L G  I  +V L   + 
Sbjct: 583 DIGEVPFGRQKSKFLSVG-CSDHSVRILSLENDTCLQKISIQALPG--IAENVSLIEMKR 639

Query: 593 IS-----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 641
            S           YL   L +G LL   ++  TG L+D +   L   P+    +  +   
Sbjct: 640 GSGLEQEAEQYQLYLYVGLKNGILLRASVDQITGSLSDTRTRVLSGAPVRTCKYQVQGQP 699

Query: 642 HVFA--------ASDRPTVIYSSNKKLL 661
            + A          D P  +++   KLL
Sbjct: 700 ALLALKLIHKTEVDDIPGSLHAHKGKLL 727



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 43/295 (14%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHI 868
            L+LI + E      SL+A  GKLLA     ++ Y    K +L+    + LQS        
Sbjct: 704  LKLIHKTEVDDIPGSLHAHKGKLLAGCGTFLRYYDIGKKKLLKKSEVKGLQSPING---- 759

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
                +QT GD I V  +  ++ ++ +K +E    E   D    WMSA ++LD   Y+G +
Sbjct: 760  ----IQTFGDRIFVSMVGDAVHIMKHKQKEQTFYEVCDDVLPRWMSAFQVLDYSTYIGGD 815

Query: 929  NNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGS 970
               N+F  R  +N+E   DE         E G L       E + ++++GE V  F+   
Sbjct: 816  KFENMFVCRIPQNAEEEMDENPMSYKLRWESGYLNGAPYKTEQICQFYVGEVVTTFQKAC 875

Query: 971  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHE 1029
            LV        G    +I+GT  G IG       ++ + F   L+  LR  +  + G +H 
Sbjct: 876  LV------STGN-ECIIYGTSMGSIGAFYPFQTKEDIDFFVHLEMYLRIDVLPLAGRDHV 928

Query: 1030 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +R+F    K+V     +DGDL E F+ + + +   +++ M  +  E+ K+++E+
Sbjct: 929  MFRAFYGPVKSV-----IDGDLCEQFMRIGQGKQKVLAEEMERTPAEVHKKLDEI 978


>gi|326510951|dbj|BAJ91823.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1360

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 207/471 (43%), Gaps = 86/471 (18%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 404
           N+GP++D  + D   + Q Q+ +C G   +GSLR++RNG+ + +    E   QGI G+W+
Sbjct: 480 NVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIYQGITGLWT 539

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           LR    D + +FLV++F+ ETRIL++ L    + ++  GF  +  TL C       LVQ+
Sbjct: 540 LRMKRTDTYHSFLVLAFVEETRILSVGLSFN-DISDAVGFQPEVCTLACGLIADGLLVQI 598

Query: 465 TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
            S  V+L   TS            +  +W   P  +++V       V +AT     +Y+ 
Sbjct: 599 HSKGVKLCLPTSYAHPEGATLTSPVCVDWY--PDVTISVGAVGHDVVAVATSNPCCLYIL 656

Query: 515 IGDGI------LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG----------MWTDI 558
               +      L E +H QL+YE+SC+ I P  ++   +  +A+G             ++
Sbjct: 657 RVRPLSSLQYELYETQHVQLQYEVSCISI-PEEDSRLRTPSSAIGGDFRERKGNNSVAEV 715

Query: 559 SVRIFSL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGI 593
           +VR+F++     P + +I+ E                  LG  +   IP +V + A E  
Sbjct: 716 NVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSGCIPENVRVVASERF 775

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDR----------------------KKVSLGTQPIT 631
            Y+L  L +G LL F    ++G   D+                          +G  P+ 
Sbjct: 776 -YILAGLRNGMLLRF----ESGTSKDQYLPGSFYKESFAPSLNTLLQLVAIRHIGITPVG 830

Query: 632 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
           L        + +   SDR  ++++S   L YS+++    SH+ P +S   P  L    E 
Sbjct: 831 LVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLLFVAEN 890

Query: 692 ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEE 740
            L +  +   ++L+ +   +G  PR++ +   SRT  +    L   SC+ +
Sbjct: 891 CLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSD 941


>gi|326519701|dbj|BAK00223.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1360

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 207/471 (43%), Gaps = 86/471 (18%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 404
           N+GP++D  + D   + Q Q+ +C G   +GSLR++RNG+ + +    E   QGI G+W+
Sbjct: 480 NVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIYQGITGLWT 539

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           LR    D + +FLV++F+ ETRIL++ L    + ++  GF  +  TL C       LVQ+
Sbjct: 540 LRMKRTDTYHSFLVLAFVEETRILSVGLSFN-DISDAVGFQPEVCTLACGLIADGLLVQI 598

Query: 465 TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
            S  V+L   TS            +  +W   P  +++V       V +AT     +Y+ 
Sbjct: 599 HSKGVKLCLPTSYAHPEGATLTSPVCVDWY--PDVTISVGAVGHDVVAVATSNPCCLYIL 656

Query: 515 IGDGI------LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG----------MWTDI 558
               +      L E +H QL+YE+SC+ I P  ++   +  +A+G             ++
Sbjct: 657 RVRPLSSLQYELYETQHVQLQYEVSCISI-PEEDSRLRTPSSAIGGDFRERKGNNSVAEV 715

Query: 559 SVRIFSL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGI 593
           +VR+F++     P + +I+ E                  LG  +   IP +V + A E  
Sbjct: 716 NVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSGCIPENVRVVASERF 775

Query: 594 SYLLCALGDGHLLNFLLNMKTGELTDR----------------------KKVSLGTQPIT 631
            Y+L  L +G LL F    ++G   D+                          +G  P+ 
Sbjct: 776 -YILAGLRNGMLLRF----ESGTSKDQYLPGSFYKESFAPSLNTLLQLVAIRHIGITPVG 830

Query: 632 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
           L        + +   SDR  ++++S   L YS+++    SH+ P +S   P  L    E 
Sbjct: 831 LVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLLFVAEN 890

Query: 692 ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEE 740
            L +  +   ++L+ +   +G  PR++ +   SRT  +    L   SC+ +
Sbjct: 891 CLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSD 941


>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS 6054]
 gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 1228

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 259/1246 (20%), Positives = 499/1246 (40%), Gaps = 193/1246 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDV----P 57
            S++ Y +T   P+N T S +G F   ++   I+       + LL P      ++V     
Sbjct: 7    SLYLYHLTLRAPSNFTSSVLGQFLGEKKSQEILVSSVST-LQLLRPNAETGKIEVVASQN 65

Query: 58   IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDR-IGRPTD 116
              G I  +E  R  G  +D   +  E  K   L++D +    +       +    GR  +
Sbjct: 66   TLGVIHKIEKIRIVGTQKDLAVVVGESGKVVFLEFDVDLHRFVPVLQEPYAKTGFGR-VN 124

Query: 117  NGQIGIIDPDCRLIGLHLYDG---LFKVIPFDNKGQLK-----EAFNIRLEELQV--LDI 166
             G+   +DP  R I L   +    +FKV   D++G+++     EA +     L V  LD 
Sbjct: 125  PGEYLAVDPQSRCIFLGAIERNKLIFKV-ETDSQGKVELSSPLEAHSKHTLTLSVVALDT 183

Query: 167  KF---LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEG------PWSQNNLDNGAD 217
            +F   ++   +      + D K      +  + L   +  +G        S N + + A 
Sbjct: 184  QFSNPVFAAIECDYSNYHSDGKVQFDADSSPLLLNYYELDQGLNHIVKKKSTNTIPSSAT 243

Query: 218  LLIPVPPPLCGVLIIGEETIVYCSANA-----FKAIPIRPS------ITKAYGRVDADGS 266
             LIP+P  + GV +  +  I+Y + +      +  +P+R        ++    ++  +  
Sbjct: 244  HLIPLPSHVGGVFVCCKNYIIYDNLHKNLERLYLPLPLRKDSEYTVVVSHVVHKLKKNNF 303

Query: 267  RYLLGDHAGLLHLLVITH--EKEKVTGLKIELLGETSIASTISYL-----------DNAV 313
              LL    G L  + + +  +KE +  ++I       ++S+++ L           ++ +
Sbjct: 304  FVLLQSSMGDLFKVTVEYNSDKELIEDIQIGYFDTIPVSSSLNILKSGFLFANVLNNDKL 363

Query: 314  VYIGSSYGDS-QLIKLNLQPDAKG----------------SYVEVLERYVNLGPIVDFCV 356
             Y     GD  + I+L   PD                     + ++E + +L PI D  +
Sbjct: 364  YYQFEKLGDDDENIQLKASPDISSIDEEDRSNRTFTVKALDNLALVEIFTSLSPITDAGI 423

Query: 357  VDLERQGQG----QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDD 411
            V+    G      Q++T S       L+ + +GI  +   S  L  I  G+ + +   D 
Sbjct: 424  VESISSGTADSLQQMITASS---HSHLKSLVHGIQTSTLVSSPLPIIPTGVLTTKLFADS 480

Query: 412  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
              D +LV+S    +R L +++ + +EE E   F +   TL       + +VQ+ +  +R 
Sbjct: 481  RSDEYLVISSTVASRTLVLSIGEVVEEVENSQFVNDQPTLAVQQVGTSSVVQIYTNGIRH 540

Query: 472  VSSTSRELR--------NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILT 521
            V  T  E +         +W  P G ++  A+ +  QV++A     + Y E+   D  L 
Sbjct: 541  VKHTRTEDKEQSISRKITDWYPPAGITIVNASTHREQVIIALSNAEICYFEVDATDDQLI 600

Query: 522  EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 581
            E +  ++E   S   I    E  +   + AV   +D ++++ SL   N +    L   + 
Sbjct: 601  EYQD-RVEMSNSITSIAICEETANKKNLFAVVGCSDETIQVLSLQPHNCLETLSLQA-LS 658

Query: 582  PRSVLLCAFEGISYLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
              S  L   +  +  +  +G  +G  +   +   +G L+D +   LG++P+TL      N
Sbjct: 659  ANSTSLSMLQNDNTTMVHIGMDNGLYVRTSIEEISGNLSDTRIKYLGSKPVTLSVTKLPN 718

Query: 640  -TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS--------AAFPDSLAIAKE 690
             +  + A S RP + Y +  +   + +   ++     F+S         A  D+  I   
Sbjct: 719  GSKAILAISSRPWICYYNRSEFKVTPLLGVKILKGASFSSEDIGGEGIVALSDNNLIV-- 776

Query: 691  GELTIGTID---DI-QKLHIRSIPLGEHPRRICHQEQSRT------------------FA 728
               TIG  D   DI Q ++I  I L   PR++   +  ++                  F+
Sbjct: 777  --FTIGKEDVEFDINQDVNIEKIRLRYTPRKLIIDDDGKSSKVNYIYALQSEYGTKSPFS 834

Query: 729  ICSLKNQSCAE-------------ESEM----HFVRLLDDQTFEFISTYPLDTFEYGCSI 771
              +L ++   E             E+E+      ++++D +    I T    + E   S+
Sbjct: 835  PSNLNSEDDPESEIDQDYYDAFGYETEVDKWASCIQVVDFENSSIIQTVEFSSNESAISM 894

Query: 772  LSCSF--SDDSNVYYCVGTAYVLPE--ENEPTKGRILVFIVEDG-------KLQLIAEKE 820
                F  S   N+ + +       +  +N   K  +  F ++         +L+ + + E
Sbjct: 895  AKLHFVSSGKGNMEHLIIGVTTDRKFLKNSVGKSYLFTFKIQKNTRKSNKKRLEYLHKTE 954

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL----QSECGHHGHILALYVQTR 876
               +   +  FNG+LL  + + ++LY     D G R+L     +   +   I+ L V T 
Sbjct: 955  IDCSPTVMIPFNGRLLVGMGKYLRLY-----DIGHRQLLRKSSTNIDYISSIVDL-VHTG 1008

Query: 877  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 936
            G+ I  GD   SI    +   E      A D     ++AV  LD D  +G +   N+F  
Sbjct: 1009 GERIAFGDSHSSIVFAKFDSAENRFVPFADDIMKRQITAVAALDYDTVIGGDKFGNVFVS 1068

Query: 937  R----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
            R                K  E   +    R + + E+ L +    F  GS+        +
Sbjct: 1069 RVPDSVSKKSDEDWSLLKVQESYLNASPSRTKNLCEFFLSDTPTSFTKGSMT-------I 1121

Query: 981  GQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIK-GVGGLNHEQWRSFNNEK 1038
            G    +I+  + G +G++  L  +  + F+  L+ +LR+ +   + G++H ++RS+ N  
Sbjct: 1122 GGHDGIIYTGIQGTVGLLLPLSTKSEVQFINSLEQSLRQQMGFNLLGMDHLKFRSYYNP- 1180

Query: 1039 KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                 KN +DGDLIE + +LS++   +I++ +N + +E+ K++ +L
Sbjct: 1181 ----VKNVIDGDLIEKYYELSQSLKIKIARELNRTPKEVEKKISDL 1222


>gi|33146591|dbj|BAC79787.1| putative Splicing factor 3B subunit 3 [Oryza sativa Japonica Group]
 gi|222636635|gb|EEE66767.1| hypothetical protein OsJ_23488 [Oryza sativa Japonica Group]
 gi|429459546|gb|AFZ84679.1| spotted leaf 5 [Oryza sativa Japonica Group]
          Length = 1355

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 145/609 (23%), Positives = 252/609 (41%), Gaps = 92/609 (15%)

Query: 275  GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA 334
            G  HLL  + + E V  L  E +        + ++D  +V      GD  +++L      
Sbjct: 414  GEFHLLEFSLDMEGVKVLP-ECVHRGLPCKPLLWMDKGMVVGFVEMGDGMILQLENNRLV 472

Query: 335  KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
              S ++      N+ PI+D  + D   + Q Q+  C G   +GSLR++RNG+ + +    
Sbjct: 473  HKSAIQ------NVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRT 526

Query: 395  E--LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF 452
            +    G+ G+W+LR    D + +FLV+SF+ ETRIL++ L    +  +  GF +   TL 
Sbjct: 527  DPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFN-DICDAVGFQTDVCTLA 585

Query: 453  CHDAIYNQLVQVTSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVL 502
            C       LVQ+ S  V+L   T+            +  +W   P  +++V     + V+
Sbjct: 586  CGLVADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWY--PDVTISVGAVGHNVVV 643

Query: 503  LATGGGHLVYLEIGDGI------LTEVKHAQLEYEISCLDINPIG---ENPSYSQIAAVG 553
            +AT     +Y+     +      L E++H QL YE+SC+ I       +N S S   +  
Sbjct: 644  VATSNPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSCATSGD 703

Query: 554  MWTDIS--VRIFSL-----PDLNLITKE-----------------HLGGEI---IPRSVL 586
               D +  +R F++     P +++I+ E                  LG  I   IP +V 
Sbjct: 704  FRKDFAANIRKFAVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVR 763

Query: 587  LCAFEGISYLLCALGDGHLLNFLLNMKTGEL----------TDRKKVSL--------GTQ 628
              A     Y+L  L +G LL F      G            T     SL        G  
Sbjct: 764  FVAAARF-YILAGLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGIT 822

Query: 629  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
            P+ L     +    +    DRP ++ S+   L YS+++    SH+ P +S   P  L   
Sbjct: 823  PVVLVPLHDRANADIIVLGDRPWLLQSARHSLAYSSISFLPASHVTPVSSTDCPSGLLFV 882

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMHFV 746
             E  L +  +   ++L+ +   +G  PR++ +   SRT  +    L + SC+ +     +
Sbjct: 883  SENCLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSD-----I 937

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-ENEPTK 800
              +D      +S +  +  E    +      +D  +   VGT+      ++P  E E  K
Sbjct: 938  VQIDPSNGALLSRFKCEPGETAKCMQIAKIGNDQVLI--VGTSKSNGRPMMPNGEAESIK 995

Query: 801  GRILVFIVE 809
            GR+++  +E
Sbjct: 996  GRLILLSLE 1004


>gi|302820387|ref|XP_002991861.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
 gi|300140399|gb|EFJ07123.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
          Length = 1292

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 215/475 (45%), Gaps = 73/475 (15%)

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
           GD  ++K+    D + S+   ++   N+ PI+DF +VD   + Q Q+  C G  ++GS+R
Sbjct: 413 GDGHVLKVE---DGQLSFQSFVQ---NIAPILDFSLVDYYGEKQDQMFACCGGDEEGSVR 466

Query: 381 IVRNGIGINEQASVE--LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
           I+RNG  + +        QG+ G+W++R    DP+  F ++SF+ ETR+L++ L + ++ 
Sbjct: 467 IIRNGNSVEKLICTPPVYQGVSGIWTMRYRFKDPYHAFFLISFVEETRVLSVGL-NFVDI 525

Query: 439 TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST----------SRELRNEWKSPPG 488
           T+  GF SQ  TL C       + QV    V+L S T          S  L   W+  PG
Sbjct: 526 TDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAAHPAGVSGSNPLSTTWRK-PG 584

Query: 489 YSVNVATANASQVLLATGGGHLVYL----EIGDGI--LTEVKHAQLEYEISCLDI----- 537
           Y ++V     S+V+LA     L+ +    +  DG   L E++   +E EISC+ I     
Sbjct: 585 YPISVGAVCRSRVILALARPGLLLMLGATQTSDGSFELVELQLCMMEAEISCISIPQGDI 644

Query: 538 --------------NPIGENPSYSQIAAVGMWTDISVRI-----------FSLPDLNLIT 572
                         N +        +  VG     SV +           F++  ++LIT
Sbjct: 645 SIPVPPTIAGLHAGNTVPAGLDLGNVCVVGTHKP-SVELLSIVPGDKFAPFAVGQVSLIT 703

Query: 573 KEHLGGEI---IPRSVLLCAFEGISYLLCALGDGHLLNF--------LLNMKTGELTDRK 621
              +G  +   IP+ V L  F+ + Y+L  L +G LL +        L+  K  +L    
Sbjct: 704 S--VGTAVSGCIPQDVRLALFDRL-YILAGLRNGMLLRYEWPEDTPSLVLSKPAQLHLVA 760

Query: 622 KVSLGTQPITLRTF-SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 680
              LG  P+ L    +      + A SDRP ++  + K++ Y++++ +  +H  P  S  
Sbjct: 761 ARRLGVSPVCLVPLEACALRADIIALSDRPWLLQMA-KRISYTSISFQPSTHATPVCSKD 819

Query: 681 FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ 735
            P  +    +  L +  ++  + L+++ + LG   RR+ +  +S    +  L ++
Sbjct: 820 CPKGIIFLADCSLHLVEMEQSRTLNVQKLHLGCTGRRVLYHPESGVLIVLRLLSE 874



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA--ENN 930
            +  R   I VGD    + L  Y+ +   +E    D     +S   ++D D  +    + N
Sbjct: 1049 ISVRFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVDRQGN 1108

Query: 931  FNLFTVRKNSEGATDEERG----RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ---I 983
            F   +  + +EG  D   G     LE    +H+GE     R GS   +  +        I
Sbjct: 1109 FCALSANEETEGKCDSNSGSPEKNLEAHCWFHIGEVCTTVRKGSFAFKAVEDSCSVDRLI 1168

Query: 984  PT-----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 1038
            P      VI  T+ G + +   +  E+Y  L+ LQ  L  +      L ++  R F  + 
Sbjct: 1169 PNMGKSCVIATTLLGSVFIFVRMTGEEYSLLQALQRRLSVLPATAPVLGNDHAR-FRGQG 1227

Query: 1039 KTVDAKNFLDGDLIESFLDLS 1059
            +    K  LDGDL+E FL+L+
Sbjct: 1228 RPAGVKEVLDGDLLEQFLELT 1248


>gi|308449821|ref|XP_003088088.1| hypothetical protein CRE_07177 [Caenorhabditis remanei]
 gi|308249634|gb|EFO93586.1| hypothetical protein CRE_07177 [Caenorhabditis remanei]
          Length = 236

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 135/238 (56%), Gaps = 6/238 (2%)

Query: 5   NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
           +Y V++ K + V+ S VGNFT  + +NLI+A+  RI++ L++P+GL+ + ++PIYG++ T
Sbjct: 4   SYCVSSKKASVVSESVVGNFTGHEHVNLIVARGNRIDVQLVSPEGLKNVCEIPIYGQVLT 63

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIID 124
           + L R   E +  L + TE+++  VL +     ++ITR  G ++D+ GR +DN    +  
Sbjct: 64  MALVRCKREKRQSLVVVTEKWQMAVLTY--RDGKVITRTAGALADQSGRASDN-LFSLTI 120

Query: 125 PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL-YGCAKPTIVVLYQD 183
               L+ +  Y+G  K+I ++  G    +FN+R +   V D KF+  G      +    D
Sbjct: 121 HRSGLVAIRAYEGSVKMIQWE-PGTDVRSFNVRFDYPNVSDFKFIDTGVDDTYRIAFIYD 179

Query: 184 NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS 241
           +   +H++  ++ + DK+       Q ++   A +LIPVP P+ GVL++   +I+Y S
Sbjct: 180 DDHGKHLQFSDLNMHDKEL-HTFSRQASIAADASVLIPVPAPISGVLVLAANSILYKS 236


>gi|358253751|dbj|GAA53701.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
          Length = 726

 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 146/646 (22%), Positives = 274/646 (42%), Gaps = 77/646 (11%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIYG 60
           ++ Y +T  + + +TH+  GNF+  ++  + +A+   IE+    P    +  +L    +G
Sbjct: 4   MYLYNITLQRASGITHAVHGNFSGTKQQEIAVARGKIIELLRPDPNSGKVYTLLTCEAFG 63

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +   FR  G ++D+L + ++  +  VL++   S     +   +   + G R    GQ
Sbjct: 64  IIRSFMPFRLTGSSKDYLIVGSDSGRVVVLEY-IPSKNAFEKLQQETFGKSGCRRIVPGQ 122

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
              ++P  R  +IG      L  ++  D++ +L  +  +   +   L    +    G   
Sbjct: 123 YLAVNPKGRAFMIGAVEKQKLVYIMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFEN 182

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPVP 223
           P    +  D +DA    T E A        + E     N+        L+  A+ LI VP
Sbjct: 183 PLFACIEMDYEDADQDSTGEAARGANQLLTYYELDLGLNHVVRKYSEPLEEHANFLIAVP 242

Query: 224 ---PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLL----GDH--A 274
                  G+LI  E  I Y   N      IR  I +    +D D  R +L      H   
Sbjct: 243 GGNEGPSGILICSENYITY--KNFGDQPDIRCPIPQRRNNLD-DPDRGILFVCSASHKTK 299

Query: 275 GLLHLLVITHE-----------KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
            L   L  T +            + VT +K++      +AS +  L    +++ S +G+ 
Sbjct: 300 NLFFFLAQTEQGDIFKINLEVDDDMVTEIKLKYFDTLPVASAMCVLKTGFLFVASEFGNH 359

Query: 324 QLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDL 359
            L ++                           P A  + +EV +   NL PI+ + + D 
Sbjct: 360 SLYQIAHLGDDDDEPEFSSAMPLEEGDTFYFAPRALKNLIEV-DVLENLSPIMHYHIADF 418

Query: 360 ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLV 418
             +   Q+    G     + R++R+G+ ++E A  +L G    +W+++ ++++ +D +++
Sbjct: 419 ANEDTPQLAVLCGRGPGSTFRLLRHGLEVSEMAKSDLPGNPNAVWTVKRNSEEEYDAYII 478

Query: 419 VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
           VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  R 
Sbjct: 479 VSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHIRADKRV 536

Query: 479 LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLD 536
             N W++P    +     N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ 
Sbjct: 537 --NVWRAPGKKMIVRCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADVICMA 594

Query: 537 INPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 581
           +  I  +   S+  AVG+  D +VRI SL P ++ ++ E     ++
Sbjct: 595 LGRIPTSEQRSRFLAVGL-ADNTVRILSLDPSVSRVSCERFSTPMV 639


>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
          Length = 1039

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 138/636 (21%), Positives = 266/636 (41%), Gaps = 81/636 (12%)

Query: 2   SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHL--LTPQGLQPMLDVPIY 59
           +++ Y +T   PT+VT + +G F+  +E  ++ A   R+ ++   +    +  +L   ++
Sbjct: 6   NMFLYSLTIQPPTSVTQAIIGQFSGTKEQQIVTASGPRLNLYRPDINSGKIIKLLSHDVF 65

Query: 60  GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
           G I ++  FR  G ++D++ +A++  +  ++++    +      +        R    GQ
Sbjct: 66  GIIRSIAAFRLAGSSKDYIILASDSGRIAIVEYAPTKNSFSRIHLATFGKSGVRRVIPGQ 125

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
               DP  R  LI     + L  V+  + + +L  +  +   +  +L    +    G A 
Sbjct: 126 YLAADPKGRACLIASIEKNKLVYVLNRNAEAELTISSPLEAHKHGILVFSVVSLDVGYAT 185

Query: 175 PTIVVLYQDNKDARHVKTYEVALK--------DKDFVEGPWSQNNLDNGADLLIPVP--- 223
           P    L  D  +A    + EV ++          + V   WS+  +D  + LL  VP   
Sbjct: 186 PVFAALEADYTEAEQDDSAEVEIQLVYYELDLGLNHVVRKWSEV-VDPTSSLLFQVPGGS 244

Query: 224 --PPLCGVLIIGEETIVYCSAN--AFKA-IPIRPSITK--AYGRVDADGSRYLLGDHAGL 276
             P   GVL+ GEE + Y  +N  AF+  IP R   T+     R+   G  + L      
Sbjct: 245 DGP--SGVLVCGEENVTYRHSNQEAFRVPIPRRRGATEDPQRRRIIVSGVMHKLKGSTSA 302

Query: 277 LHLLVITHEKE------------------KVTGLKIELLGETSIASTISYLDNAVVYIGS 318
              L+ T + +                  +VT +KI+      ++++I  + +  ++   
Sbjct: 303 FFFLLQTDDGDLFKVTLDMAEDADGNLTGEVTRIKIKYFDTIPVSNSICIMKSGFLFTAG 362

Query: 319 SYGDSQLIKL---------------NLQPDAKGSY------------VEVLERYVNLGPI 351
            +G+ Q  +                +   D + SY            + ++E   ++ P+
Sbjct: 363 EFGNYQFYQFEKLGDDDDETEFTSDDFPTDYQASYHPVYFHPRPLENLTLVESVSSMAPL 422

Query: 352 VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTD 410
           +D  ++    +   Q+    G     +LRI+R+G+ +NE  + EL G    +W+ + +  
Sbjct: 423 MDCKILTQAGEDISQIYAACGNGARSTLRILRHGLEVNELVASELPGTPSAVWTTKLTQS 482

Query: 411 DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
           D +D +++++F+ +T +L++   + + +    GF +   TL       N L QV S  +R
Sbjct: 483 DDYDAYIILTFLHDTMVLSVG--ETVTQVTDSGFITTVATLAVQQIGKNSLFQVYSKGIR 540

Query: 471 LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLE 529
            + S       EW  P   ++  A  N  QV +A   G +VY E+  DG L E    +  
Sbjct: 541 HIQSGQ---FTEWPVPQHRTIVAAATNERQVAIALSSGEIVYFEVDEDGSLAEFDERKEI 597

Query: 530 YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 565
             ++ L + P+ E    S   AVG   D +VRI SL
Sbjct: 598 GSVTSLGLGPVPEGRLRSPFLAVGC-DDCTVRILSL 632



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 163/339 (48%), Gaps = 25/339 (7%)

Query: 762  LDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIA 817
            L+  E G S     F S D   +  +GT   ++    + ++G I V+   +DG+ L+ I 
Sbjct: 704  LEGNEAGVSAAVVPFTSQDGESFLIIGTGKDMIVNPRQSSEGFIHVYRFHDDGRSLEFIH 763

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 877
            + + +    +L +F+G+LLA I + +++Y   +R    R+ Q++     HI++L  Q++G
Sbjct: 764  KTKVEEPPTALLSFHGRLLAGIGKTLRIYDLGMRQ-LLRKAQADISPQ-HIVSL--QSQG 819

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 937
              IVVGD+   +++++Y      +     D  A W + + + D +   G +   N++ VR
Sbjct: 820  FRIVVGDVQHGVTMVVYNPVSNKLLPFVDDTIARWTTCLAMADYESVAGGDKFGNIWIVR 879

Query: 938  --KNSEGATDEERGRLEVV-GEYHLGEFVNRFRHGS--LVMRLPDS------DVGQIPTV 986
                +    DE    +++  G+ +L    +R +  +   V  +P S       VG    +
Sbjct: 880  CPDKASAEADEPGSDVQLSNGQSYLHGAAHRLQLMAHMFVQDIPTSICKTSLVVGGQDVL 939

Query: 987  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            ++  + G IGV+  L   E   F + L+ ++R     + G +H  +R ++     V  K 
Sbjct: 940  LWSGLQGTIGVLIPLVTRETADFFQTLEMHMRNEDPPLAGRDHLMYRGYH-----VPVKG 994

Query: 1046 FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +DGDL E F  LSR +   I+  ++ SV E+ +R+ ++
Sbjct: 995  VIDGDLCERFSLLSREKKQMIAGELDRSVREVERRISDV 1033


>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
 gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
          Length = 1241

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 181/821 (22%), Positives = 349/821 (42%), Gaps = 96/821 (11%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPI----YGR 61
           Y +T  KPT++ ++  GNF+  +   + +++   +E  LL P  +   L V I    +G 
Sbjct: 59  YNITLQKPTSIYNAISGNFSGVKLQEICVSRGHLLE--LLKPDPMTGKLSVIISHECFGI 116

Query: 62  IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQI 120
           I +L  FR  G ++D++ + ++  +  +L++  + + + T+   +   + G R    GQ 
Sbjct: 117 IRSLSSFRLTGSSKDYIVVGSDSGRIVILEYIPDKN-IFTKVHQETFGKSGCRRIVPGQY 175

Query: 121 GIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKP 175
             +DP  R  +IG      L  ++  D+  +L  +  +   + Q +  + +    G   P
Sbjct: 176 LTVDPKGRAIMIGATEKQKLVYIMNRDSAARLTISSPLEAHKSQSICFQIVGVDVGFENP 235

Query: 176 TIVVLYQDNKDARHVKTYEV--ALKDKDFVEGPWSQNN--------LDNGADLLIPVP-- 223
               L  D ++   V T EV  A++   F E     N+        LD  A+ LI VP  
Sbjct: 236 LFACLEVDYEEIDSVNT-EVGKAIQTLTFYELDLGLNHVVRKYAEPLDYFANHLIAVPGG 294

Query: 224 -PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR--------YLLGDHA 274
                GV++  E  I+Y   N  + + +R  I +    ++ D  R        +LL    
Sbjct: 295 SEGPSGVILCCENYIIY--KNLGEQLDVRCPIPRRRNDLE-DPDRGILVNAFFFLLQTEQ 351

Query: 275 GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVV--YIGSSYGD-------SQL 325
           G +  + +    + VT +KI+      +A++I  L +  +  Y  +  GD       S L
Sbjct: 352 GDIFKVTLEVFDDIVTEIKIKYFDTLPVANSICMLKSGFLNLYQIAKLGDNDDETEFSSL 411

Query: 326 IKLN------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSL 379
           + L+        P    + ++V +  ++L PI+ F V D+  +   Q+    G     S+
Sbjct: 412 MPLDEGDTFFFAPRGLQNLIQV-DELLSLSPIMSFEVADIVYEDTPQLYAACGRGPRSSI 470

Query: 380 RIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMN-LEDELE 437
           +++R+G+ + E A  EL G    +W+++   D  +D ++VVSF++ T +L++    +E+ 
Sbjct: 471 KVLRHGLEVTEMAISELPGNPNAVWTVKKHQDAEYDAYIVVSFVNATLVLSIGETVEEVT 530

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
           ++ + G                  VQ+    +R +    R   NEWK P    +     N
Sbjct: 531 DSVVLGVVD---------------VQIYPEGIRHIRCDRR--VNEWKVPGRRVITNCAVN 573

Query: 498 ASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 555
             QVL+A  GG +VY E+ + G L E  +  ++  ++  + +  I       +  AV + 
Sbjct: 574 CRQVLIALNGGEIVYFELDEGGQLNEYTERKEMPCDVVAMALADIPPGEIRCRFLAVAL- 632

Query: 556 TDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGI---SYLLCALG-------DGH 604
           TD +VR+ SL   + +T  ++     + +S+ + A  G    S L   +G       +G 
Sbjct: 633 TDRTVRVISLDPSDCLTPLNMQSLPAMAQSLCIAAVGGDTMESTLFLNIGLEVNKFTNGV 692

Query: 605 LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT--------HVFAASDRPTVIYSS 656
           LL  +L+  TGEL D +   LG +P+ L      +          ++ A S R  ++Y  
Sbjct: 693 LLRTVLDSVTGELQDTRTRYLGMKPVKLFKVKMHDNIAVMNSVQLNIIAMSSRAWLLYKY 752

Query: 657 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL-HIRSIPLGEHP 715
             +   + ++   + +   F S   P+ +       L I  I+++  + +  S  L   P
Sbjct: 753 QTRYHLTPLSYIPLEYASNFASDQCPEGVVAIAGNSLRILAIENLGTIFNYSSFQLSHTP 812

Query: 716 RRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 756
           RR     ++         + S   +++M    +L  +  E 
Sbjct: 813 RRFVFHPETGNIITVETDHNSLTTQTKMKRREILAKEMIEL 853



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 27/283 (9%)

Query: 812  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILA 870
            +L+++       AV +L +F G+LLA+  + +++Y     D G ++L  +C   H   L 
Sbjct: 970  RLEMMHRTTVDEAVTALASFRGRLLASAGKMLRIY-----DLGKKKLLRKCENKHMPNLI 1024

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
             ++ T G  I VGD+ +S+    YK  E  +   A D +  + SA+ ILD D       +
Sbjct: 1025 THILTMGHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILDYDTVALRLPS 1084

Query: 931  FNLFTVRKN--------SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 982
                 V+++         +G  +    + E+V  +++GE V   +   L+        G 
Sbjct: 1085 DCTDDVQEDPTGIRALWDKGILNGASQKCEMVATFYVGECVTCLQKAMLI-------PGS 1137

Query: 983  IPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
              ++++ T++G+IG +      E Y F + L+ +LR     + G +H  +RSF       
Sbjct: 1138 SESLVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLRTEYPPLCGRDHLAYRSF-----YA 1192

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              K  +DGDL E +  L   +  EIS  ++    E+ K++E++
Sbjct: 1193 PVKGVIDGDLCEQYCLLEYGKQKEISNELDRVPSEIMKKLEDI 1235


>gi|308812436|ref|XP_003083525.1| UV-damaged DNA binding protein 1 (ISS) [Ostreococcus tauri]
 gi|116055406|emb|CAL58074.1| UV-damaged DNA binding protein 1 (ISS), partial [Ostreococcus tauri]
          Length = 265

 Score =  128 bits (321), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/103 (60%), Positives = 73/103 (70%)

Query: 920  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
            DD+ YLGAEN+ NLFTV +N    TDEER RLE+ GEYHLGE VN F  GSLVM L D +
Sbjct: 2    DDETYLGAENSLNLFTVSRNVNAVTDEERSRLEITGEYHLGELVNAFAPGSLVMSLRDGE 61

Query: 980  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 1022
               +PT++FGT NGVIGV+ASLP + Y F E+LQ     VI G
Sbjct: 62   SLSVPTLLFGTANGVIGVLASLPKDVYEFTERLQALGEFVICG 104


>gi|429328598|gb|AFZ80358.1| hypothetical protein BEWA_032110 [Babesia equi]
          Length = 1387

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 214/1090 (19%), Positives = 418/1090 (38%), Gaps = 234/1090 (21%)

Query: 228  GVLIIGEETIVYCSANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLL-VIT 283
             VL++G  ++ + + N  K+I       S+++  G    + S+++L D  G +HL+ ++ 
Sbjct: 303  SVLLLGAGSVGFFAFNDPKSIKDFVSDFSMSEITGYCQIEHSKFVLSDDNGNIHLMELVL 362

Query: 284  HEKEKVTGLK-----------------------------IELLGETSIASTISYLDNAVV 314
              K   TGLK                             I  L    I S+I  + N  +
Sbjct: 363  SSKPANTGLKRRIRPINSNNNCDMHAHRGRTIATISDVIITRLYNCDIPSSIINIGNNTI 422

Query: 315  YIGSSYGDSQLIKLNL--QPDAKGSYVEVLERYV-------NLGPIVDFCVVDLERQGQG 365
            +  S  G++   +++   +P       ++ E  V       NLGPI DF   +    G  
Sbjct: 423  FSTSKVGNTCTFRIDFGNKPSICSDSFKIEEFNVYKTWNQTNLGPIADFTYGEENSHGNK 482

Query: 366  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS--STDDPFDTFLVVSFIS 423
             V+ C G    G    +  G+GI+   S  + GI  ++S+ S  S  D  ++ L  SF  
Sbjct: 483  SVLACCGMGSAGKFCSITLGVGIDTICSNTILGISNLFSVSSGGSKTDSNESILCCSFYR 542

Query: 424  ETRILAMNLED-------------ELEETEI----------EGFCSQTQTLFCHDAIYNQ 460
             T+  ++N                ++ E  +            F    +T+   +   ++
Sbjct: 543  NTQFYSVNFVSMNNTQGNINSSLLDINEPNVGYVNKMVMDGSTFREDERTILLSNIDKDK 602

Query: 461  LVQVTSGSVRLVSSTSRELRNEWKSPPGY--SVNVATANASQVLLATGGGHLVYLEIGD- 517
            +VQ+T+ S+ ++SS  +  R  +K+       ++  +   ++++ A   G  +++ + + 
Sbjct: 603  IVQITTSSIIILSSNPKLNRIAYKTVEEIMTEIDEGSEERNRIVHACLCGSYIFIILSNH 662

Query: 518  --GILTEVKHAQLEYEISCLDINP---IGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT 572
               IL   K   +  E   ++I+    I    + ++  A+  W   S+ I S P+L+++ 
Sbjct: 663  WAAILDGKKLEMVNVEPLSINISSVAYISHVKNSAEFLALSTWEKSSILILSFPNLDIVR 722

Query: 573  KEHLGGE--IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMK----------------- 613
            +  +     I  +S+   A     +   +L DG L+ + + M                  
Sbjct: 723  RIKIECTFGIYIKSMKFGATNNNLFFFVSLSDGQLMVYKVQMSRNITNAVSKGKSDVFKN 782

Query: 614  --------------TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 659
                          +   T  + ++L    I  +T  + +  ++ A   + T I+S   K
Sbjct: 783  DVEIDFILDSTMHLSNTCTKLEFLNLSNNYIHEQT-CNLDCNNIIAIGKQSTAIFSKRDK 841

Query: 660  LLYSNVNLKEVSHMCPF----NSAAFPDSL-AIAKEGELTIGTIDDIQKLHIRSIPLGEH 714
            + ++ VN+  VS +C       S+ F   L A      L IG +D I++ H+++I  G  
Sbjct: 842  VEFAKVNISHVSCLCTIPTQRTSSEFNSVLIAYYSYPSLVIGKLDPIEQFHVQNIISGRT 901

Query: 715  PRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFIS---------------- 758
              ++C+   S+   +      S      +  +  +DD    F+                 
Sbjct: 902  FDKVCYHVPSKVAVVGCPPELSATTSDSVPGLNDIDDNNPPFMCLDGSESEKVNSLKLPA 961

Query: 759  ------------TYPLD-TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILV 805
                         Y L+   E+  S L     D +N    +GT+ V    + PT+G   +
Sbjct: 962  LALFINVSSKEVIYNLNLPREHLVSSLHTMSFDGTNEVILIGTSKVDESHDAPTEG--FL 1019

Query: 806  FIVE-----DGKLQLIAEKETK---GAVYSLNAFNGKLLAAINQKIQL------------ 845
            +IV+     + +L +  ++ TK   G V  + +     + A+N  +              
Sbjct: 1020 YIVDISSHSEDRLVMTIQRTTKPFAGGVVEITSCGQNPVIAVNNVVLALSLCSNIGVRNE 1079

Query: 846  -------YKWMLRD--DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
                   Y +   D  D  + L  E  +  +   + + +  + I+VGDLM S  LL +K 
Sbjct: 1080 KDRYDLEYLYACDDIIDSRQCLVVEAKYTSNTYVVSLDSCENNIIVGDLMTSAKLLRFK- 1138

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 956
             +    E  RD+N+ W +AV  +D +  + ++++ N     KN     D +  + +V+G 
Sbjct: 1139 -DNCFYELCRDFNSIWCTAVASIDKNTSIVSDDSGNFSIFSKNETPTNDAQSAKFQVMGL 1197

Query: 957  YHLGEFVNRF-----------RHGSLVMR-------------LPDSDVGQI--------- 983
            +H GE +N+            R  SL+               L  +D   +         
Sbjct: 1198 FHHGEIINKIVEHVSKECKYERKKSLIKLGGVASSCKRNFCCLSTADTCPMDPTNGSKST 1257

Query: 984  --------------PTVIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRKVIKGVGGLNH 1028
                           T +  T +G I  +++    + +L L  L+  +  +    G + +
Sbjct: 1258 NIHKDAAPTRYRFDKTYLCATSSGSILKMSTFKDMDAFLRLALLEEAIIGIQSDAGNIPN 1317

Query: 1029 EQWRSFNNEKKTVDAKNFLDGDLIESFL----DLSRT---RMDEISKTMN---VSVEELC 1078
             +WR+F N    +  + F+DGD +ESFL    DL R    ++ E SK +     S+E L 
Sbjct: 1318 SKWRNFQNSHTNIQTRGFIDGDTVESFLHLPMDLKRRVLEKLQESSKDIQGDFDSIETLT 1377

Query: 1079 KRVEELTRLH 1088
              +E++ R+ 
Sbjct: 1378 LEIEQIQRVR 1387


>gi|221116994|ref|XP_002166173.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
           magnipapillata]
          Length = 107

 Score =  127 bits (319), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/104 (50%), Positives = 78/104 (75%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIA 63
           +NYVVTA + T +  +  G+FT P +LNLI+AK  ++E+H++TP+GLQP  D+ +YGR+A
Sbjct: 3   YNYVVTAQEATAINATVTGHFTGPTDLNLIVAKNNKLELHMVTPEGLQPKFDLNVYGRVA 62

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV 107
            ++LFRP  E QD LFI TERY+  +L + AE+ ++IT+A GDV
Sbjct: 63  VMQLFRPQNENQDLLFILTERYRTAILAYKAETGDIITKAYGDV 106


>gi|335310432|ref|XP_003362030.1| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
          Length = 701

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 143/631 (22%), Positives = 270/631 (42%), Gaps = 81/631 (12%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T ++ +  GNF+  ++  +++++   +E+    P    +  +L V ++G
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            I +L  FR  G  +D++ + ++  +  +L++   S  +  +   +   + G R    GQ
Sbjct: 61  VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQP-SKNMFEKIHQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
              +DP  R + +   +   L  ++  D   +L  +  +   +   L    +    G   
Sbjct: 120 FLAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFEN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNNLDNGAD-------LLIPVP- 223
           P    L  D ++A +  T E A   +    F E     N++             L+ VP 
Sbjct: 180 PMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSQIIAEFHFLLTVPG 239

Query: 224 ----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR------------ 267
               P   GVLI  E  I Y   N      IR  I +    +D D  R            
Sbjct: 240 GSDGP--SGVLICSENYITY--KNFGDQPDIRCPIPRRRNDLD-DPERGMIFVCSATHKT 294

Query: 268 -----YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD 322
                +L     G +  + +  +++ VT ++++      +A+ +  L    +++ S +G+
Sbjct: 295 KSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGN 354

Query: 323 SQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFC-VV 357
             L ++                          QP    + V +++   +L PI+ FC + 
Sbjct: 355 HYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLV-LVDELDSLSPIL-FCQIA 412

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
           DL  +   Q+    G     SLR++R+G+ ++E A  EL G    +W++R   +D FD +
Sbjct: 413 DLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAY 472

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
           ++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R + +  
Sbjct: 473 IIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADK 530

Query: 477 RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISC 534
           R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  ++  ++ C
Sbjct: 531 R--VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVC 588

Query: 535 LDINPIGENPSYSQIAAVGMWTDISVRIFSL 565
           + +  +      S+  AVG+  D +VRI SL
Sbjct: 589 MSLANVPPGEQRSRFLAVGL-VDNTVRIISL 618


>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
 gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
          Length = 845

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 22/413 (5%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 405
           +L PI+D  V +L  +   QV T  G     +LRI+R G+ I+E A   L      +W++
Sbjct: 28  SLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTV 87

Query: 406 RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
           + + +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV 
Sbjct: 88  KKNINDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVH 145

Query: 466 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 524
              +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+
Sbjct: 146 PNGIRHIREDGR--VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVE 203

Query: 525 HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 583
              +  +++CL I P+ E    S+  AVG + D ++RI S+ PD  L           P 
Sbjct: 204 KQDMSGDVACLAIAPVPEGRQRSRFLAVGSF-DNTIRILSVDPDDCLQPLSVQSVSSAPE 262

Query: 584 SVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 631
           S++    +               +L   L +G L    ++M TG+L+D +   LG +P  
Sbjct: 263 SLMFLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPK 322

Query: 632 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 691
           L      +   +   S RP + Y      L + ++   +     F+S    + +      
Sbjct: 323 LFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGD 382

Query: 692 ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 742
            L I TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E
Sbjct: 383 ALRIFTIEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEERE 435



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 44/365 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 801
            +R+LD ++ +      L   E   SI + +F D +      VGTA  L   P+ N  + G
Sbjct: 494  IRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL-SAG 552

Query: 802  RILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
             I ++  V++G+ L+L+ + + +    +L  F G+LLA +   ++LY     D G R+L 
Sbjct: 553  FIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLL 607

Query: 860  SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 918
             +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   
Sbjct: 608  RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 667

Query: 919  LDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLG 960
            +D D   GA+   N++  R                  K  +G  +    ++E + ++H+G
Sbjct: 668  IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 727

Query: 961  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKV 1019
            + V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+ 
Sbjct: 728  DVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQE 780

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
               + G +H  +RS          K+ +DGDL E F  L      +I+  ++ +  E+ K
Sbjct: 781  HPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPSLPADMQRKIADELDRTPGEILK 835

Query: 1080 RVEEL 1084
            ++E++
Sbjct: 836  KLEDI 840


>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
 gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
          Length = 1242

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 260/1248 (20%), Positives = 492/1248 (39%), Gaps = 210/1248 (16%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELN-LIIAKCTRIEIHLL-TPQG-LQPMLDVPI 58
            S++ Y +T   P++   S VG F+  ++   L++A  T IEI+   T +G L+ ++    
Sbjct: 34   SLFLYNLTLQPPSSAHKSLVGQFSGQKKTQELVLATSTTIEIYRPDTEKGKLRKLMVQHA 93

Query: 59   YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
            +  +  ++  R  G  +D L I ++  K  V +++   S+ +       S    R    G
Sbjct: 94   FAIVQNIDKIRLTGTQKDLLIITSDSGKVVVAEFNEALSKFVPIVQEPHSKNGLRRVTPG 153

Query: 119  QIGIIDPDCRLIGLHLYDG---LFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP 175
            +   ++PD R + +   +    ++KV   +  G LK +  +       L +     CA  
Sbjct: 154  EYLCVEPDNRAVMIAAVERNKLVYKVEMQNESGILKLSSPLENTSKNTLTLNL---CALD 210

Query: 176  T---------IVVLYQDNKDARH--------VKTYEVALKDKDFVEGPWSQNNLDNGADL 218
            T         I + Y + ++  +        +  YE+  +  + +    S+ ++D  A+L
Sbjct: 211  TNYENPLWAAIEIDYSNYENREYDSQSSPLQLNYYELD-QSLNHIILKKSKPDIDASANL 269

Query: 219  LIPVPPPLCGVLIIGEETIVYCSA----NAFKAIPIRPS-----ITKAY-GRVDADGSRY 268
            LIP+P P  GVLI  +  ++Y S       +   P+R       IT  Y  ++       
Sbjct: 270  LIPLPAPAGGVLICCKSYLIYESTPGGTRKYLQFPVRSDTSEVVITNFYVHKLKKKEFFV 329

Query: 269  LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS---QL 325
            L+    G L  + ++ E E +T           + ++++  ++  ++  S+  +    Q 
Sbjct: 330  LVQSSLGDLFKITVSIEGETLTAFYATYFDTIPVCTSLNIFNSGFLFANSTDNNKFFYQF 389

Query: 326  IKLNLQPDAKGSYVE--------------------VLERYVNLGPIVDFCVVDLERQ--- 362
              L    D   S V                     ++E   +L P+VD  +++       
Sbjct: 390  ESLGEADDTTTSSVSEKSDFPTKTFFDSRGLKNLSLVEVLGSLSPLVDSTMLETYSSEFP 449

Query: 363  -GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ-GIKGMWSLRSSTDDPFDTFLVVS 420
                Q+VT +    +  ++ +  G+ ++E  S  +      +++ + S     D +LV++
Sbjct: 450  DPLKQLVTLAS---NSYMKTLTYGVPVSELVSSPVPINPTSIFTTKISKKSINDDYLVLT 506

Query: 421  FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS------ 474
                 + + +++ + +EE    GF     T+       + LVQV +  +R + +      
Sbjct: 507  SSLTMKSMVLSIGEVVEEVSDSGFALDQHTIAVQQIGQHSLVQVHNNGIRHIRNFFDDSD 566

Query: 475  --TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI--GDGILTEVKHAQLEY 530
              TS+   N W  P G  +  A+ N  QVL+      + Y EI   D  L E +  +LE 
Sbjct: 567  NVTSKRETN-WYPPAGIVILHASTNNEQVLVGLSNREVCYFEIDPADDQLIEYQE-RLEV 624

Query: 531  ---EISCLDINP--IGENPSYSQIAAVGMWTDISVRIFSLPD--LNLITKEHLGGEIIPR 583
                I+ L +    + E    S  A +G   +    I  LP     ++T + L       
Sbjct: 625  TGGSITALALASKFVTEGDRKSNFAVIGTSEETIQVISLLPKTCFEIVTLQALSANCF-- 682

Query: 584  SVLLCAFEGISYLL-CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN--T 640
            S+L+   +  +Y +   + +G      +++ +G+L D +   LGTQP++LR+ +  N  +
Sbjct: 683  SLLMMPLDKDNYFVHIGMINGVYARVRIDVVSGKLGDSRLKYLGTQPVSLRSLALPNVAS 742

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP------DSLAIAKEGELT 694
            + + A S RP + Y +N+    SN  L  +  +   + +AF       +S+   ++GE+T
Sbjct: 743  SGILAISSRPWIGYFNNE----SNFKLTPLIDISIKDGSAFYSEDIGIESVVGIRDGEIT 798

Query: 695  IGTI--------DDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV 746
            I T+        D    L I SI L   PR+      +  F +          ESE   +
Sbjct: 799  IFTVGGEEGEGFDVTNDLTISSIKLRYAPRKQLKDSLTDYFFVI---------ESEFGVI 849

Query: 747  ------RLLDDQTFEFIS------------------------TYPLDTFEYGCSILSCSF 776
                  + +D + FE                           T+     E   S+ S   
Sbjct: 850  SPYLESKEVDAEYFEVFGYKKKENSWASCLQIVDVAGSGIEYTHEFTNNECTISLASIKI 909

Query: 777  SDDSNVYYCVGTAYVLPEENEPTKGR-ILVFIVEDG---KLQLIAEKET--KGAVYSLNA 830
             D+   Y  VGT   L        G  I  F ++     K +L+   +T  +    SL A
Sbjct: 910  RDEE--YLIVGTTENLVYSPHYYSGNSIYTFRIKRNAKKKPELVYLHKTTIEFPPSSLCA 967

Query: 831  FNGKLLAAINQKIQLY----KWMLRDDGTR-ELQSECGHHGHILALYVQTRGDFIVVGDL 885
            FN KLL     +++LY    K +LR   T+ +         HI        GD IVV D 
Sbjct: 968  FNEKLLVGAGNQLRLYDVGRKQLLRKTSTKIDFLRRINKIQHI-------AGDVIVVCDS 1020

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-------- 937
             +S+S + +   +        D     ++A+E+LD    +  +   N+F  R        
Sbjct: 1021 SESVSFMRFDQTKNQFIAFCNDTAKRQITALEVLDSRTVIAGDRFGNIFVSRIPKNVAEQ 1080

Query: 938  -------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 990
                   K  E        RL+ + +++  + V     GS V       VG   ++I+  
Sbjct: 1081 LENNVLMKFEEETLGASSSRLDKLCDFYTQDIVTSLHKGSFV-------VGGSESIIYTG 1133

Query: 991  VNGVIGVIASLPHEQYL-FLEKLQTNLRKVIK-------------GVGGLNHEQWRSFNN 1036
            + G +G++  L   Q +  L KL+ +LR                  + G  H ++R + N
Sbjct: 1134 LQGTVGILLPLATTQEVDLLMKLENSLRDYFNDSFDDFDNTKQGFNLVGREHLKFRGYYN 1193

Query: 1037 EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                   +N +DGD IE F +L+ +   +++  ++ S  ++ +++ +L
Sbjct: 1194 P-----VENVIDGDFIERFFELNPSAQVKLAGRLDKSPRDIERKIYDL 1236


>gi|147839354|emb|CAN61260.1| hypothetical protein VITISV_043608 [Vitis vinifera]
          Length = 831

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 59/67 (88%)

Query: 98  ELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIR 157
           E I  AMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIR
Sbjct: 763 EKIYGAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIR 822

Query: 158 LEELQVL 164
              L  L
Sbjct: 823 YFFLSFL 829



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 51/55 (92%)

Query: 51  QPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG 105
           +PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAE+SE+I    G
Sbjct: 481 KPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVIASIYG 535


>gi|380488197|emb|CCF37544.1| hypothetical protein CH063_08850 [Colletotrichum higginsianum]
          Length = 271

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 16/268 (5%)

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            KL+A +++ + +Y++      +  L+           + +   G+ I + DLM+S++L+ 
Sbjct: 7    KLVAGLSKTVVVYEYAEESSTSGALRKLATFRPSTFPVDIDVNGNMIGIADLMQSMTLVE 66

Query: 894  Y----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 949
            +       +  + ERAR +   W ++V  L+   +L A+   NL  +R+N +  T+ ++ 
Sbjct: 67   FIPAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMVLRRNPDAPTEHDQK 126

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 1009
            ++EV  E+HLGE VN+ R   +    P+ +   +P     TV G + V A +  E    L
Sbjct: 127  QMEVTSEFHLGEQVNKIRPLDIT---PNENDPIVPKAFLATVEGSLYVFADIKSEYQSLL 183

Query: 1010 EKLQTNLRKVIKGVG--------GLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSR 1060
             + Q  L  V+K +G        GL+   WR F N K+  D    F+DG+LIE FLDL  
Sbjct: 184  LQFQERLADVVKTLGQAGGDSTSGLSFMAWRGFRNAKRAADGPFRFVDGELIERFLDLDE 243

Query: 1061 TRMDEISKTMNVSVEELCKRVEELTRLH 1088
             + + + + +  +VE +   VEEL R+H
Sbjct: 244  AKQEAVVQGLGPTVENMRNLVEELKRMH 271


>gi|164658491|ref|XP_001730371.1| hypothetical protein MGL_2753 [Malassezia globosa CBS 7966]
 gi|159104266|gb|EDP43157.1| hypothetical protein MGL_2753 [Malassezia globosa CBS 7966]
          Length = 919

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 190/827 (22%), Positives = 336/827 (40%), Gaps = 105/827 (12%)

Query: 267  RYLLGDHAGLLHLLVITHEKEKVTGLKIELL--GETSIAST---ISYLDNAVVYIGSSYG 321
            R LL    G +++L ++        + + LL    +S+A++   +S L    V++ S+ G
Sbjct: 130  RVLLSTTRGSMYILTVSSSTNAWETIHMHLLRLQMSSVATSPQGLSSLGEDFVFLASTTG 189

Query: 322  DSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 381
            DS L  ++  P     Y     R+ +  PIVD  V+D       +++T SGA    SLR 
Sbjct: 190  DSVLWHVDSSPSLHEVY-----RWPSTAPIVDM-VLD-NSSVMDRIITASGAGPTSSLR- 241

Query: 382  VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 441
                  I  +A      IK           P D   V +  S   ++  N    ++  E 
Sbjct: 242  -----AIMYKALTSTLFIK-----------PMDLVSVYALESALVLVHRNSASIVQLNEH 285

Query: 442  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE------WKSPPGYSVNVAT 495
            E     TQ    HDA   +++     +   + +TS+++R        W +P   S     
Sbjct: 286  E---DPTQISIVHDA---RVLHAGMLAGLYLVATSKDIRTYGRGKTVWTAPDEISA-CHV 338

Query: 496  ANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 555
             +   V++      L+ L       + +   +    ISCL     G     S I A G W
Sbjct: 339  LDDKHVVIGLVTPQLLVLHHDHHNWSILHSLRTHAPISCL----FG---CASAIVA-GFW 390

Query: 556  TDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMK 613
             D +V+ +  P +      H+    +P S+L  AF   G ++ +    DGH+  +     
Sbjct: 391  -DRTVQKYVWPSMEG-DPIHIACTSLPTSILQHAFTPHGENHTVVGYADGHVDVY----- 443

Query: 614  TGELTDRKKV----SLGTQPITLRT-----FSSKNTTHVFAASDRPTVIYSSNKKLLYSN 664
                 D+ K+     +GT+PI L T         NT  + A+      +Y  +     S 
Sbjct: 444  ----NDQDKIVHTCQVGTEPIHLTTAPLSMMELPNTHAIVASGSYTCFLYPQDSAFRASI 499

Query: 665  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL-GEHPRRICHQEQ 723
              ++ V      ++++   ++  A +  L +  I  +  L I+S+ L G+ P  I     
Sbjct: 500  WLIEHVRAAACVDASSQALTMVCATQFGLEVHAIHTLHHLDIQSLSLKGQQPTSIA---S 556

Query: 724  SRTFAICSLKNQSCAEESE--MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 781
               + + +       E  E  +  +R++     + ++++ L  +E   S  +C     + 
Sbjct: 557  FGPYIVLTTWPMHAWEHHERGLSTIRVMTKAGLKQVTSHSLHAYERPNS--ACVKKFYNT 614

Query: 782  VYYCVGTAYVLPEENEPTKGRILVFIVED--GKLQLIAEKETKGAVYSLNAFNGK-LLAA 838
             Y  VGT + +   +  + GR++ +       KLQLI   +  G VY +    G  L+AA
Sbjct: 615  PYIVVGTGFYVGGRDSTSSGRLIGYTWSTPLSKLQLIWSCDVPGHVYGVTDVPGSYLVAA 674

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            ++ ++  Y      DG  +L    G     LA  + ++G  +VVGD M S+++L     +
Sbjct: 675  VDAQVHTYALC---DGKLKLCDRWG--CAFLATCLTSQGSTVVVGDAMHSLTVLQVD-PK 728

Query: 899  GAIEERARDYNANWMSAVEIL--DDDIYLGAENNFNLFTV-RKNSEGATDEERGRLEVVG 955
            G + E ARD +  W +AV +L  +   Y+G +   N+F   R +    TD          
Sbjct: 729  GQLHEIARDVDPYWTTAVGVLSTEQQQYIGTDIAMNMFVAERVHQTDGTDPWS------- 781

Query: 956  EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
              H+      F HG +V  +     G+I   +FGT +G +G +  +P E    L  +Q  
Sbjct: 782  --HVMHRATAFHHGDMVNTIQSVADGRI---LFGTASGSVGTLMYVPDETASMLWCVQEA 836

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL-SRT 1061
            L       G L+ E WR+   + +    ++ LD +L+ +F    SRT
Sbjct: 837  LSHQRHAHGDLSWESWRTLRTDMQICAPRHVLDAELLTTFFTCESRT 883


>gi|167380951|ref|XP_001733297.1| DNA repair protein xp-E [Entamoeba dispar SAW760]
 gi|165902459|gb|EDR28278.1| DNA repair protein xp-E, putative [Entamoeba dispar SAW760]
          Length = 349

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 133/235 (56%), Gaps = 5/235 (2%)

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY---KHEEGAIEERARDYNANWM 913
            +LQ +   +  ++ LYV+T G+ I+VGDLMKSIS+  +    + +  + E +RD+ A++ 
Sbjct: 114  KLQEKGSCNVKLIGLYVKTMGNKILVGDLMKSISVYSFDNNGNNKNCLNEVSRDFYASYT 173

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            +A+E +D++ YL +++N NL     NS G  + ER RL      H+GE +N    GS+  
Sbjct: 174  TAIEFVDENCYLSSDSNSNLLVFNTNSTG-NESERFRLNNCAHIHVGECINVMCKGSIAP 232

Query: 974  RLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWR 1032
                 +  Q   ++FG V G IG I  +P+E Y  L K+Q  +   +KG V     ++W+
Sbjct: 233  THSTYETIQKKCILFGGVTGYIGGICEIPNEIYDILIKVQNQILLQMKGIVECTTPDEWK 292

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
               ++ K + + N +DG+++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 293  KVIDDWKRMPSSNIIDGNIVESYLEMSKEKQCEIAHLSGVNEEQINDIIENMISL 347


>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis UAMH
            10762]
          Length = 1224

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 164/779 (21%), Positives = 330/779 (42%), Gaps = 85/779 (10%)

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK--GMWSL 405
            L P++   V +L  +   Q+    G      L+ +R+G+ INE  S  L  ++   +WSL
Sbjct: 433  LNPLMRTKVDNLTGEDAPQIYAIQGTGNSSVLKTMRHGLEINEIVSSPLGNLQYDNLWSL 492

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
            +    D + ++L++S     + + +++ DE+E  E   F +   T+  +      LVQV 
Sbjct: 493  KHRAVDDYHSYLLLSSGYGDKTIVLSIGDEVETMENSPFLTNRATITANQMGDATLVQVH 552

Query: 466  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 524
            +  +  +S       NEW +P   ++  A++N  Q+LL      L +  +G DG+L +++
Sbjct: 553  ARGI--LSVLESGALNEWPAPAHRTIVAASSNDRQLLLGLSSSELAFFFMGDDGVLNQLE 610

Query: 525  H-AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP-DLNLITKEHLGGEIIP 582
               ++  +I+ L +         ++ A VG   D ++R++S+  +  L  +       +P
Sbjct: 611  EMPEMSGKITALSVGQTPRGQQQAKYAVVGC-DDCTIRVYSIELETALEPRSVQALSAVP 669

Query: 583  RSVLLCAFEG------ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
             S+ +           ++Y+   L  G  L  +++  TGEL + +   LG +P  +    
Sbjct: 670  TSIEVVEMLDPSSNVLVNYVHIGLQSGLYLRAVIDDVTGELGEVRTRFLGARPTRIFPVE 729

Query: 637  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL--T 694
                  + A+S RP + Y++      + +   +V    PF +       A+  +  L  T
Sbjct: 730  IAEEQGIVASSSRPWLGYNNKGTYTLTPLVTGQVEAARPFVTEHLRGFCAVQGQSLLIFT 789

Query: 695  IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE--------------- 739
            + T D   +L    + L   PR +     S  + +      + A+               
Sbjct: 790  LPTTDG--RLSSSEVGLKYTPRAMTRHPYSPVWYVAQSDGNTLAQGTKDQLLSADGAMNG 847

Query: 740  ------------ESEMHFVRLLD--DQTFEFISTYPLDTFEYGCSILSCSF----SDDSN 781
                         S  H+   +   D  F   +T+ ++ F    + L C+     S +  
Sbjct: 848  VDEDVSKQLGLSRSAGHWASCIQAVDPIFAKAATHTIE-FTDNEAALCCAAVPFESKNWE 906

Query: 782  VYYCVGTAYVL----PEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 835
            VY  VGT   L      + +  +G + ++ ++EDG+ ++L+ +      +Y+++AF G+L
Sbjct: 907  VYLAVGTGQHLRPGVSAKGQAPRGYVHIYKLLEDGRNMELVHKTPFDAPIYAVHAFQGRL 966

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA---LYVQTRGDFIVVGDLMKSISLL 892
               +   + LY     D G + L  +    G ++A     + +RG+ ++  D+ +SI+ +
Sbjct: 967  ALGVGADLFLY-----DVGLKSLLRKS--RGTVVANTITSIDSRGNRLICADVSESITYV 1019

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGR 950
            ++K +   +     D    W +   ++D +   G +   NL+ VR  + +   +DEE   
Sbjct: 1020 VFKPKHNRMIGFVDDVIQRWTTTAAMIDYETSAGGDKFGNLWVVRCPEQASKESDEEGLG 1079

Query: 951  LEVVGEY-HLG------EFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIAS- 1000
              +V E  +LG      E  + F    + M +  + +  G    + +  + G +G++   
Sbjct: 1080 GYIVNERSYLGGAPYRLELRSHFFTQDIPMSIQRTALVAGGQEVLFWSGLQGTLGMLVPF 1139

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 1059
            +  E   F  +L+T +R     + G +H  +RS+      V  K  +DGDL E F+ LS
Sbjct: 1140 VSREDVEFFTQLETLIRAEEPPLAGRDHLMYRSY-----YVPVKGVIDGDLCERFMKLS 1193


>gi|237837399|ref|XP_002367997.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
 gi|211965661|gb|EEB00857.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
 gi|221488748|gb|EEE26962.1| splicing factor 3B subunit, putative [Toxoplasma gondii GT1]
 gi|221509241|gb|EEE34810.1| splicing factor 3B subunit, putative [Toxoplasma gondii VEG]
          Length = 1233

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 211/512 (41%), Gaps = 66/512 (12%)

Query: 275 GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGD------------ 322
           G ++ + I+HE+  V  +         +A+ +  L +  +++ S +G+            
Sbjct: 306 GDIYKVEISHEEGVVREVVCRYFDTVPVANALCVLKSGYLFVASEFGNHLFYQFTGIGSD 365

Query: 323 --------------SQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVV 368
                           +I    +P    + V+ L+   +L PI D  V+D +  G  QV 
Sbjct: 366 ASDPRCSSTHPLGREAIIAFKPRPLRNLALVDELQ---SLSPITDLKVLDAQGTGAPQVY 422

Query: 369 TCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRI 427
              G     +LRI+++G+G+ E A  EL G  + +W+ + S  + FD ++ V+F   +  
Sbjct: 423 VLCGKGPRSTLRILQHGLGVEEMADNELPGRARAVWTTKLSHQNAFDGYIFVAFDGSS-- 480

Query: 428 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 487
           L + + D +EE     F +   +L       +  +QV    +R +  + R   NEW++P 
Sbjct: 481 LVLQIGDTVEEVTDSAFLTNVSSLLVALMYDDSFIQVHETGIRHILKSKRV--NEWRAPG 538

Query: 488 GYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEYEISCLDINPIGENPSY 546
           G  +  A AN  Q++++  GG LV  E+ D   L E     +  E +C+ +  I +    
Sbjct: 539 GRRIKAAAANERQLVISLAGGELVLFEVDDAHTLVETARRNINVESTCMSMQAIPKGRLR 598

Query: 547 SQIAAVGMWTDISVRIFSL-PDLNL--ITKEHLGGEIIPRSVLLCAFEGIS--------- 594
           +   AVG   D  VRI SL  D NL  ++ + L  +  P SV L    G+          
Sbjct: 599 ASFLAVG-GLDNMVRILSLEKDRNLRQLSTQLLPNDATPESVCLATLTGLGANSTDAGKS 657

Query: 595 ------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 648
                 YL   L  G ++  +++   G L D++   LG + +     + +    + A S+
Sbjct: 658 QDNGVLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPAILALSE 717

Query: 649 RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRS 708
           +  + Y+   KL    +N   +  +  F S    D       G L I     + +   ++
Sbjct: 718 KSWLCYTFQHKLHCIPLNYDPLECVASFCSEQCTDGFVAIAGGSLRIFRCQRLGETFGQT 777

Query: 709 I-PLGEHPRRICHQEQSRTFAICSLKNQSCAE 739
           + PL   PR           A+ +L + S AE
Sbjct: 778 VLPLSFTPR-----------AMAALPHPSAAE 798



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 148/340 (43%), Gaps = 44/340 (12%)

Query: 770  SILSCSFSDDSNV-YYCVGT--AYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAV 825
            + LSC F +   +    VGT  A  L  +  P    I VF  +D   L L+     +   
Sbjct: 908  AALSCCFCEMEGLPLLVVGTVTAMTLKPKKVP-HASIKVFSYDDKFSLSLVHSTPVEDYP 966

Query: 826  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGD 884
             +L AF G LLA +  K++LY       G + L  +C +      + +++  GD + VGD
Sbjct: 967  MALTAFRGMLLAGVGHKLRLYAL-----GRKRLLKKCEYKNLPCGVAFIRVAGDRLFVGD 1021

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
            + +S+ ++ Y+  E      A D    W++  E+LD   ++ A+   ++F  R  SE   
Sbjct: 1022 VRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFDSVFICRVPSEAKE 1081

Query: 945  DE--------ERG----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
            DE         RG          +L+ +  +H+GE V      +L     +S       +
Sbjct: 1082 DELGDTTGLRLRGDTTYLTDKCFKLQSLLHFHIGEIVTALERATLTSAASES-------I 1134

Query: 987  IFGTVNGVIGVIASL--PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 1044
            ++GT+ G IG  +     HE  LF   L+  +R     + G  H  +RS+ +      AK
Sbjct: 1135 VYGTIMGSIGSFSPFLTKHELDLFTH-LEMVMRSEKPPLAGREHIMFRSYYHP-----AK 1188

Query: 1045 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            N +DGDL ES+  L       I++    +  ++ K +E++
Sbjct: 1189 NTVDGDLCESYALLPYEDQKRIAQDFEKTPADILKHLEDI 1228



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 5/149 (3%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT + H+  GNF++P+   +++++   +E+     QG LQ +    ++G I +
Sbjct: 5   YHLTLQKPTAIVHALQGNFSAPRAQEVVVSRGRVLELLRPDDQGKLQAISSTEVFGIIRS 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           +  FR  G  +D+L I ++  +  ++Q+ AE +E   R   +   + G R    G+   +
Sbjct: 65  IAAFRLTGANRDYLAIGSDSGRLAIVQFSAEKNEF-ERVHCETYGKTGIRRVVPGEYLAV 123

Query: 124 DPDCRLIGLHLYD--GLFKVIPFDNKGQL 150
           DP  R + +   +      ++  DNK QL
Sbjct: 124 DPKGRTLMVAAVERQKFVYIVNRDNKAQL 152


>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1384

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 128/549 (23%), Positives = 241/549 (43%), Gaps = 96/549 (17%)

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
            N+ PI+DF V+D + + + Q+  C G  ++GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 465  NIAPILDFSVMDDQNEKRDQIFACCGVTREGSLRIIRSGINVEKLLKTAPVYQGITGTWT 524

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
            ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   TL C       LVQ+
Sbjct: 525  VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTLACGLVADGLLVQI 583

Query: 465  TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
               ++RL   T          S    + W  P   S+++     + ++++T     + + 
Sbjct: 584  HQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPDNVSISLGAVGQNLIVVSTSNPCFLSIL 642

Query: 515  IGDGI------LTEVKHAQLEYEISCLDI--------NPIGENPSYSQIAAV--GMWTDI 558
                +      + E++   L+YE+SC+ +             +P  S  AA+  GM    
Sbjct: 643  GVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSCASSPDNSCKAAIPSGMEQGY 702

Query: 559  ---------SVRIFSLPD---------LNLITKEHLGGEI----IPRSVLLCAFEGISYL 596
                     SV + S  +           L++  +  G +    IP+ V L   + + Y+
Sbjct: 703  SFLIGTHKPSVEVLSFSEDGVGVRVLASGLVSLTNTMGAVISGCIPQDVRLVLVDQL-YV 761

Query: 597  LCALGDGHLLNF---LLNMKTG--------------ELTDRKKVSL------------GT 627
            L  L +G LL F   L +  +G              ++   KK +L            G 
Sbjct: 762  LSGLRNGMLLRFEWPLFSNASGLNCPDYFSYCKEEMDIVVGKKDNLPINLLLIATRRIGI 821

Query: 628  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 687
             P+ L  FS    + + A SDRP ++ ++ + L Y++++ +  +H  P  S+  P  +  
Sbjct: 822  TPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSISFQPSTHATPVCSSECPQGILF 881

Query: 688  AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESEMHFV 746
              E  L +  +   ++ + +   LG  PR++ +  +S+   +       +C  +     +
Sbjct: 882  VSENCLHLVEMVHSKRRNAQKFHLGGTPRKVIYHSESKLLIVMRTDLYDTCTSD-----I 936

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-ENEPTK 800
              +D  +   +S+Y L   E G S+      ++  +   VGT+      +LP  E E TK
Sbjct: 937  CCVDPLSGSVLSSYKLKPGETGKSMELVRVGNEHVLV--VGTSLSSGPAILPSGEAESTK 994

Query: 801  GRILVFIVE 809
            GR+++  +E
Sbjct: 995  GRLIILCLE 1003



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 18/146 (12%)

Query: 934  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI---------- 983
            F+ R + E ++ E    L     Y++GE     + G  + +LP  DV +           
Sbjct: 1204 FSPRDDPEYSSPESNLNLNCA--YYMGEIAMAIKKGCNIYKLPADDVLRSYGLSKSIDTA 1261

Query: 984  -PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKT 1040
              T+I GT+ G I V A +  E+Y  LE +Q  L    +   V G +H ++R   N  + 
Sbjct: 1262 DDTIIAGTLLGSIFVFAPISSEEYELLEAVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ- 1320

Query: 1041 VDAKNFLDGDLIESFLDLSRTRMDEI 1066
              A   LDGD++  FL+L+  + + +
Sbjct: 1321 --ATKILDGDMLAQFLELTNRQQESV 1344


>gi|11359310|pir||T51288 silencing protein rik1 - fission yeast (Schizosaccharomyces pombe)
 gi|4580723|gb|AAD24488.1|AF136156_1 silencing protein Rik1 [Schizosaccharomyces pombe]
          Length = 916

 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 209/944 (22%), Positives = 391/944 (41%), Gaps = 117/944 (12%)

Query: 163  VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPV 222
            + D+  L   + PT+VVL+ D  D  +V  + + L  K          +L  G  L   V
Sbjct: 44   IYDMCILNDSSTPTLVVLHSDGLDC-YVTAFLLDLSSK----------SLGKGIRLFERV 92

Query: 223  PPPLCGV-----LIIGEETIVYCSANA-FKAIPIRPSITKAYGRVDADGSRYLLGDHAGL 276
             P +        L++ E   ++C     F  I    +    +  + A    Y++ D  G 
Sbjct: 93   KPSMIMPFGKRGLLVFESLFIHCMYRGNFVTINGPCTTYMHWTPLKAQKMHYIVCDTNGY 152

Query: 277  LHLLVITHEKEKVTGLKIELLG--ETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDA 334
            L  +  +   +    L +E L        ++++ +   +++IGS   +S+LI L+   D 
Sbjct: 153  LFGVYSSILGKNKWSLVMERLPIPPFDFITSLNSIHEGLLFIGSKNSESKLINLSTLKD- 211

Query: 335  KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
                   ++   NLGPI D  V  L+   +   + C+G  ++ SL   ++ + ++     
Sbjct: 212  -------VDSIPNLGPIHDLLV--LKNDIEKSFLVCAGTPRNASLIYFQHALKLDILGQT 262

Query: 395  ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH 454
            ++ GI     L S  +      L + F SET  +A N++++ +  E++   S  +     
Sbjct: 263  KISGILRAMVLPSYPEHK----LFLGFPSET--VAFNIKEDFQ-LELDPSLSTKERTIAL 315

Query: 455  DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
                 + VQVTS  + +  S  R      +       N A       ++  G    ++ +
Sbjct: 316  SGTNGENVQVTSTFLCIYDSAKRSRLVYIEK----ITNAACYQEYSAIVINGTALAIFKK 371

Query: 515  IGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT-K 573
                  TEV     E EISCLD +      +  QI  VG W+   V I +  D + I+  
Sbjct: 372  D-----TEVARKVFESEISCLDFS------AQFQIG-VGFWSK-QVMILTFSDNSSISCA 418

Query: 574  EHLGGEIIPRSVLLCAFEGI----SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                   +PR+++L   EG+    + LL + G G   +++L       ++ K    GT P
Sbjct: 419  FQTNVPSLPRNIIL---EGVGVDRNLLLVSSGSGEFKSYVLFKNNLVFSETKH--FGTTP 473

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            ++ R F+    T++   +D P ++Y  N  L Y  +++ +   +C F   +  D L    
Sbjct: 474  VSFRRFTMNIGTYIICNNDCPHMVYGFNGALCYMPLSMPQSYDVCQFRDNSGKDFLISVS 533

Query: 690  EGELTIGTIDDIQKLHIRSIPLGEHP-RRICHQEQSRTFAICSLKN-----QSCAEESEM 743
             G L    ++ + +L  R + L   P + I  Q +     + +L+N     +S  E   +
Sbjct: 534  LGGLKFLQLNPLPELTPRKVLLEHVPLQAIIFQNK---LLLRTLENRYEDYESYKENYHL 590

Query: 744  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 803
              V   DD +F   S    +  E    I   S          VGT+ +  ++  P  GR+
Sbjct: 591  ELVDSYDDNSFRVFSFTENERCEKVLKINESSL--------LVGTSIIEQDKLVPVNGRL 642

Query: 804  LV--FIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            ++  F  E   L++++      AV  L  +N + + A  Q++ + K     +    + S 
Sbjct: 643  ILLEFEKELQSLKVVSSMVLSAAVIDLGVYNDRYIVAFGQQVAIVKL---TEERLMIDSR 699

Query: 862  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 921
                  +L L V+  G+ I + D +   +++ +  ++  +  R   +  N + A  + + 
Sbjct: 700  ISLGSIVLQLIVE--GNEIAIADSIGRFTIMYFDGQKFIVVARYL-FGENIVKAA-LYEG 755

Query: 922  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 981
             +Y+ A N+  L  +R N +     +R   E V  YHL + V++F++       P ++  
Sbjct: 756  TVYIIATNSGLLKLLRYNKDAKNFNDRFICESV--YHLHDKVSKFQN------FPITNTN 807

Query: 982  QI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV-IKGVGGLNHEQWRSFNNEK 1038
                P ++F T  G IG I SL  ++ L LE+L   +RK+    +  +++E       E 
Sbjct: 808  SFLEPKMLFATEIGAIGSIVSLKDKE-LELEELTRKIRKLKFSYLSSMDYESI-----EA 861

Query: 1039 KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE 1082
              +    F+DGDL+   +D+ R    E+ +        LC+ VE
Sbjct: 862  DLISPVPFIDGDLV---IDVKRWASSELFR--------LCRSVE 894


>gi|407416557|gb|EKF37684.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi
            marinkellei]
          Length = 1276

 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 195/878 (22%), Positives = 339/878 (38%), Gaps = 155/878 (17%)

Query: 288  KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVN 347
            KV  + + +    +I  +++ L      IGS   D+  +K        G    +LE   N
Sbjct: 376  KVPVVNLAMSSLRTIPDSLAILSGGHCVIGSRMTDTLWLKW-----CTGESGVLLE---N 427

Query: 348  LGPIVDFCV-VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 406
             GP+ D  + VD  R G   V+  +G    G + + R+ +     A+++   +  +  L 
Sbjct: 428  CGPVFDLTIAVDGPRMG---VIASTGVGMGGGVSLQRSAVNFRHDAAID--KLLNVTRLF 482

Query: 407  SSTDDPFDTFLVVSFISETRILA------MNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 460
            ++ D       ++SF   +R+        M    EL ET  +   S+      + +  N 
Sbjct: 483  AAGD-----IFIISFPGYSRVYQFQTTPNMTTIKELSETSFDK--SKETLSLVYLSERNT 535

Query: 461  LVQVTSGSVRLVSSTSRE---LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 517
             VQVTS  V +V          +NE      + +  A+ANA   LL       V + +  
Sbjct: 536  FVQVTSVGVNVVKGGKGVYIICKNE------FGIQHASANAKLRLLVFSSSRFVSV-VDL 588

Query: 518  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG 577
                     ++E E+SCL I       S SQ   +G W   +V ++ + D          
Sbjct: 589  NTRNTRASLEVENEVSCLLI-------SSSQGFVIGEWNSGAVCLYEVQD---------- 631

Query: 578  GEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD-----------RKKVSLG 626
            GEI+ +  + C+    S  +C L   +    ++ +  G + D            ++  + 
Sbjct: 632  GEILLKGRIFCSATSCS--MCILSHPYTPRLVVGLLNGYIADISLEAILMGGGARETLIR 689

Query: 627  TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 686
             QP+ L    S N   V    + P +I   +     + ++  +V+ +C     +   S  
Sbjct: 690  MQPVELFNLESHNA--VLCLGEVPLIIILCDTGFQLTGIDFNDVA-VCAIIECSHISSKY 746

Query: 687  I---AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 735
            I     E  L  G I D++KL+   + L     R+ +      F I   +N+        
Sbjct: 747  IFFSQSENSLAFGNIVDLKKLNSCFVGLKATVTRVKYIAWWNFFVISVRRNEKDQVFLLM 806

Query: 736  ------SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA 789
                  S   ++E+  + LL+++   F  T  L     G +        D +    +GT 
Sbjct: 807  GHELANSWVPQNELVSIELLENERCVFFETVVLG----GSNESPDGNEADKDKAILLGTT 862

Query: 790  YVLPEENEPTKGRILVFIVEDGKL-------QLIAEKETKGAVYS---LNAFNGKLLAAI 839
            +  P+E  P   R + + VE GKL       + I  K+ +GA+     +  + G++   I
Sbjct: 863  FAFPDEQLPRSSRFIWYSVEQGKLLSERPQLRQIGSKDVEGALQCCCIVPNYVGRIALGI 922

Query: 840  NQKIQLYKWMLRDDGTRELQSECGHH--GHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
            N  I LY W   D      ++ C       +L ++ Q    ++V  D   S   +     
Sbjct: 923  NGCIALYSWNAADSVFVAEETICIGTIVTRVLPIF-QGDASYMVAFDARHSCFFIQVDTI 981

Query: 898  EGAIEERARDYNANWM--SAVEILDD--DIYLGAENNFNLFTVRK---------NSEGAT 944
            +G++E  ARD     +   AV  L +  DI  G ++ +N F + +         N+  AT
Sbjct: 982  QGSLEIVARDSEPRGVMDGAVFQLGNIYDICFG-DDYYNFFCLSRGATTLPSASNAISAT 1040

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLV--------MRLPDSDVGQI--PTVIFGTVNGV 994
                G+L+   +YHLG+ V   + GS          + +P + +  I  P V+FGT +G 
Sbjct: 1041 VSS-GKLKTRAQYHLGDMVTAMQLGSFAPCSVTNSAVPIPTTLIPGICGPQVVFGTSHGA 1099

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS--------------------- 1033
             G I  + +E YLFL+ L+  +  V+  +GG  H  +R                      
Sbjct: 1100 FGTITPVSNETYLFLKALEVAVSSVVPALGGFEHVTYREVLRAGQERGYSRNASFENVNV 1159

Query: 1034 -----FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
                 FN  +K   ++    GDLIESFL    +    I
Sbjct: 1160 VSSEVFNKRRKRYLSRCVCSGDLIESFLTFPHSIQQRI 1197


>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
          Length = 1223

 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 176/809 (21%), Positives = 328/809 (40%), Gaps = 96/809 (11%)

Query: 348  LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI-----NEQASVELQGIKGM 402
            L P++   V +L  +   Q+    G       + +R+G+ +     N   +V    I   
Sbjct: 433  LHPLMKTRVDNLTGEDAPQIYGIQGKGNRSQFKTIRHGLDVEVLINNSMGNVPYDNI--- 489

Query: 403  WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV 462
            W+ +  T D    +L++S       +A ++ D +E+ E   F     T+         LV
Sbjct: 490  WTFKHRTTDEHHRYLLLSSNYGDLTIACSIGDSVEQIENSNFLENRATVHAEQMGDAVLV 549

Query: 463  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILT 521
            QV +  +R +    +   NEW +P   +  VA+AN  Q+LL      L +  +G D IL 
Sbjct: 550  QVHARGIRSIYQDGK--LNEWNTPAHRTCVVASANQRQLLLGLSSAELCFFWMGEDEILV 607

Query: 522  EVKH-AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP-DLNLITKEHLGGE 579
            +++   ++  +I+ + +    +    ++ A VG   D ++R+ S+  D  L  +      
Sbjct: 608  QLEEMPEMSGKITAISVGSTPKGRQQAKYAVVGC-DDCTIRVLSIELDSPLEARSVQALS 666

Query: 580  IIPRSV----LLCAFEGISYLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
             +P S+    +L    G +  +  +G   G  L  +++  TGEL D +   LGT+   L 
Sbjct: 667  AVPTSLEVVEMLDPASGTTVNVVHIGLQSGLYLRAIIDETTGELGDVRTKFLGTKAPRLC 726

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD--SLAIAKEG 691
                ++   V A S RP V Y+  +   Y+   L     M    S   PD   L   +  
Sbjct: 727  PVQVEDEECVLACSTRPWVGYNHPQTGQYTITPLI-AEKMEAARSFISPDLSGLCAIQGS 785

Query: 692  ELTIGTIDDIQ-KLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQ-SCAEESEMHFVRL 748
             L I  +  ++ +L   S+ L   PR +  H      + + S  N  S A   ++    +
Sbjct: 786  SLLIFQLPSVEGRLSHSSVQLNNTPRGMARHPYYQIWYTVQSDGNTLSKATRDQLRGSPI 845

Query: 749  LDDQTFEFISTY------------------PLD------TFEYG------CSILSCSFSD 778
             DD+    +  +                  P++      T E G      C       S 
Sbjct: 846  DDDEEAMALERHLGLPRGNTHWASCIQAIDPINRQAVVSTVEMGDNEAALCCACVAFESR 905

Query: 779  DSNVYYCVGTA-YVLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKL 835
            +  V+  VGT  ++ P       G + +F + EDG KL  + + +    VY+L  F+G+L
Sbjct: 906  NWEVFLAVGTGQHMSPGTGLQAAGYVHIFKLEEDGTKLTFVHKTKFDQPVYALLPFHGRL 965

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
               +  ++ +Y     D G + L  +  G       + +++ G  I+ GD+ + ++ ++Y
Sbjct: 966  ALGVGNELFIY-----DIGQKALLRKARGQATPNQIVSLESHGQRIICGDVSEGVTYMVY 1020

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG-- 949
            K     +     D    W +   ++D +   G +   NL+ VR   + S+ A +E  G  
Sbjct: 1021 KPGYNRLIPFVDDVVQRWTTGTTMIDYETTAGGDKFGNLWVVRCPEQPSQEADEEGAGGF 1080

Query: 950  -------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
                         RL++   Y+  +     +  +LV        G    + +  + G +G
Sbjct: 1081 IMNERSYLGGAPYRLDLRAHYYCQDIPMSLQRTALV-------AGGQEVLFWSGLQGTLG 1133

Query: 997  VIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
            ++   +  E   F   L+  LR     + G +H  +RS+      V  K  +DGDL E F
Sbjct: 1134 MLVPFVTREDVEFFTSLEQQLRIEDPPLAGRDHLMYRSY-----YVPVKGVIDGDLCERF 1188

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            + LS     +++  ++ SV+E+ K+V+E+
Sbjct: 1189 MALSYDSKQKVAAEVDRSVKEIEKKVQEM 1217


>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 226/537 (42%), Gaps = 80/537 (14%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
           N+ PI+D  VVD   +   Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 462 NIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWT 521

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           ++    D + +FLV+SF+ ETR+L++ L    + T+  GF     TL C       LVQ+
Sbjct: 522 VKMKVIDSYHSFLVLSFVEETRVLSVGLSFT-DVTDSVGFQPDVSTLACGVVDDGLLVQI 580

Query: 465 TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
               V+L   T+            +   W  P   S+++     + +++AT     +++ 
Sbjct: 581 HKNGVKLCLPTTVAHPEGIPLASPICTSW-FPENISISLGAVGYNLIVVATSSPCFLFIL 639

Query: 515 IGDGI------LTEVKHAQLEYEISCLDI--NPIGENPSY--------SQIAAVGMWTDI 558
               +      + E++H +L+ E+SC+ I      + PS         S  AA+ +  +I
Sbjct: 640 GVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAALLIGVNI 699

Query: 559 SVRIF-------SLPDLNLITKEHL----GGEIIPRSVLLCAFEGIS------------Y 595
             RIF       S+  L+ +  E L     G I   + L  A  G              Y
Sbjct: 700 G-RIFVIGTHKPSVEILSFLPDEGLRILASGAISLTNTLGTAVSGCVPQDARLVLVDRFY 758

Query: 596 LLCALGDGHLLNFLLNMKTGELTDRKKVS-------------------LGTQPITLRTFS 636
           +L  L +G LL F L   +   +                         +G  P+ L   S
Sbjct: 759 VLSGLRNGMLLRFELPAASMVFSSELSSHSPSTNINSPVNLQLIAIRRIGITPVFLVPLS 818

Query: 637 SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 696
                 + A SDRP ++ S+   L Y++++ +  +H+ P  S   P  +    E  L + 
Sbjct: 819 DSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILFVAENSLHLV 878

Query: 697 TIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 756
            +   ++L+++   LG  PR++ +  +SR   +        ++++    +  +D  +   
Sbjct: 879 EMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLV---MRTELSQDTYSSDICCVDPLSGSV 935

Query: 757 ISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYVLPEENEPTKGRILVFIVE 809
           +S++ L+  E G S+      ++           G A +   E E TKGR++V  +E
Sbjct: 936 LSSFKLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLE 992



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 17/203 (8%)

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLFTVR 937
            I VGD    +    Y  +   +E+   D     ++   ++D D  + ++   +  + +  
Sbjct: 1122 IAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLSCS 1181

Query: 938  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----GQIPTVIF---- 988
             + E     E   L +   Y++GE     + GS   +LP  DV     G    + F    
Sbjct: 1182 NHLEDNASPE-CNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSENS 1240

Query: 989  ---GTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
               GT+ G I ++  +  E++  LE +Q  L   ++   + G +H ++RS  N  +    
Sbjct: 1241 IMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHNEFRSRENSVRKAGV 1300

Query: 1044 KNFLDGDLIESFLDLSRTRMDEI 1066
               LDGD++  FL+L+  + + +
Sbjct: 1301 SKILDGDMLAQFLELTSMQQEAV 1323


>gi|440301427|gb|ELP93813.1| DNA repair protein xp-E, putative [Entamoeba invadens IP1]
          Length = 1001

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 193/398 (48%), Gaps = 22/398 (5%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           ++ T   PT VTHS V   T   ++ L+++K   +E + +  +GL  ++      +I  L
Sbjct: 9   FLSTLCPPTAVTHSVVSQMTQTHKI-LVVSKFNILEFYQINTEGLLFLVSKRYPSKIEVL 67

Query: 66  ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
             ++P  +  +++ + T   +  V++    ++ L   + G +SD  GR +  G   ++ P
Sbjct: 68  LKYKPVKDEDEYIIVVTASVQIDVIKL---TTNLHVVSSGFLSDPFGRLSFYGMKAVVSP 124

Query: 126 DCRLIGLHLYDGLFKVIPFDNKGQLK-EAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDN 184
           + + + LH+Y+ L K +    +   K  A N ++   +++D  F     + T+V L++++
Sbjct: 125 NGQYLLLHIYEQLIKFVKLPQRPSDKIFATNSKISINRIIDFSFCTIADQETVVFLHENS 184

Query: 185 KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA 244
           +D RHV TY +    ++FV+  +SQ N+ +   L++ +P  + GVL+I +ET  Y +   
Sbjct: 185 RDTRHVNTY-IIDDHQNFVKSTFSQPNVGSSTRLVLGLPNGVNGVLVISDETACYFTGTG 243

Query: 245 FKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-KVTGLKIELLGET-SI 302
              + +     +       +    +L D     HLL +    E  V+ +   +L  T S+
Sbjct: 244 -DHVLVNVGKNRITTTTFLNKDMVILTDSNTGCHLLKLKVCVENSVSEILYSVLPSTESV 302

Query: 303 ASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ 362
           A T+S +   +++ GSS G S L++++          E+ E + N GPI D   ++    
Sbjct: 303 AQTVSVIGGDIIFFGSSSGKSYLMRVS---------GEIFETWENCGPITDLKKIE---N 350

Query: 363 GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 400
            +  V+ C+G  ++  L ++  G G+ E  S  L+ ++
Sbjct: 351 KENYVINCNGGGQE-CLGVIFKGSGVKELGSTSLEHVR 387



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 147/331 (44%), Gaps = 41/331 (12%)

Query: 752  QTFEFI--STYPLDTFEYGCSILSCSFSDD-SNVYYCVGTAYVLPEENEPTKGRILVFIV 808
            Q F  I  ++YP +     C    C   +  S   Y +GTA +   E EPT GR+LV   
Sbjct: 684  QLFNLIDGASYPSEFLLLSCDEEICMCVETISEHLYVIGTAIIKENEVEPTVGRLLVAEE 743

Query: 809  EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 868
             DGKL L    E +GAVY++  F   +LA IN+ + +          R +        ++
Sbjct: 744  VDGKLVLKCTHEFEGAVYAIKKFKQHVLALINRHLHVMDITNESVLPRNIIEL-----NM 798

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA-RDYNANWMSAVEILDDDIYLGA 927
            + + ++  GD+I+VGD MKS+++ + K ++ +  E+A  D   +W++AV  +++    G 
Sbjct: 799  IGVCMEVLGDYIIVGDFMKSVTVFVCKSDDLSQTEKAWTDIAVSWVNAVGCIEN----GD 854

Query: 928  ENNFNLFTVRKNSEGATD--EERGRLE----VVGEYHLGEFVNRFRHGSLVMRLPDSDVG 981
             N F    V  N +      EER  +E     VG+ H+ E +N F   SL          
Sbjct: 855  SNKFVSCDVDGNVKIFVKGGEERWYIEDLLKCVGKIHVCECIN-FVEKSLY--------- 904

Query: 982  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
                V  G V+G +  I+ L    Y  L+K Q  L K          + WR F   K   
Sbjct: 905  --KGVTLGGVSGALYNISCLSDNDYQILKKAQDMLVK----------DNWRQFVGTKTKE 952

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
               NF+DGD IE+ LD    R     K + V
Sbjct: 953  VMTNFIDGDKIETILDWPLERQTSFCKKIGV 983


>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
           falciparum 3D7]
 gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
           falciparum 3D7]
          Length = 1329

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 219/535 (40%), Gaps = 57/535 (10%)

Query: 212 LDNGADLLIPVP---PPLCGVLIIGEETIVYCSAN---AFKAIPIRPSI--TKAYGRVDA 263
           +D  A LLIP+P       GVLI  E  +VY   +    + A P R  I   K    +  
Sbjct: 263 IDITAHLLIPLPGGQQGPSGVLICCENFLVYKKVDHEDIYCAYPRRLEIGQDKNISIICW 322

Query: 264 DGSRY------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIG 317
              R       L+    G L+ + + HE   V  +  +      I ++IS L +  +++ 
Sbjct: 323 TMHRIKKFFFILIQSEYGDLYKIEVDHEDGIVKEIVCKYFDTVPIGNSISVLKSGSLFVA 382

Query: 318 SSYGD-------------SQLIKLNLQPDAKGSYVE----------VLERYVNLGPIVDF 354
           + +G+              Q +  +  P  K + +           ++++  +L PI+D 
Sbjct: 383 AEFGNHYFYQFSGIGDDNKQFMCTSNHPLGKNAIIAFKTNKLKNLYLVDQIYSLSPILDM 442

Query: 355 CVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPF 413
            ++D +     Q+ T  G     SLRI+++G+ I E A  EL G  K +W+++      +
Sbjct: 443 KIIDAKNTHTPQIYTLCGRGPRSSLRILQHGLSIEELADNELPGKPKYIWTIKKDNLSEY 502

Query: 414 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 473
           D ++VVSF   T IL +   + +EE       +   TL  +    N  +QV    +R ++
Sbjct: 503 DGYIVVSFEGNTLILEIG--ESVEEVSDTLLLNNVTTLHINILYDNSFIQVYDTGIRHIN 560

Query: 474 STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQLEYEI 532
               ++  EW +P    +  A++N+SQ++++  GG L+Y EI +   L E+    L  E+
Sbjct: 561 G---KVVQEWVAPKNKQIKAASSNSSQIVISLSGGELIYFEIDESHTLVEIFRKNLNVEV 617

Query: 533 SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCA 589
            CL I  I  N   +   AVG   ++ VR+ S+        ++   L     P+ + +  
Sbjct: 618 LCLSIQQIPPNRVRANFLAVGCLDNV-VRLLSIEKDKYFKQLSTHLLPNNSSPQDICISE 676

Query: 590 F---------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 640
                       I +L   L  G LL  +++   G L++     LG + I +   +    
Sbjct: 677 MNDNGNTMKERNIIFLNIGLNTGVLLRSIIDPVAGTLSNHYSKYLGAKSIKICPVNVNKN 736

Query: 641 THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
             +    ++  + Y    K LYS +N   + +   F S    D         L I
Sbjct: 737 PALLVLCEKTYLCYMHQGKFLYSPLNYDMLEYASSFYSPQCSDGYVAISSNSLRI 791



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 45/363 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENEP-TKGR 802
            +++++    + +    LD  E   S+ +C         +C  VGT   L  + +  T   
Sbjct: 983  IKIINPVNLQILDKISLDMEEAALSVCACELE----ALHCLIVGTTTNLSLKTKSLTSAS 1038

Query: 803  ILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            + V+  +   KL L+     +   Y   ++NGKL+A+I  K+++Y       G ++L  +
Sbjct: 1039 LRVYTYDIQYKLNLLHITPIEEQPYCFCSYNGKLIASIGNKLRIYAL-----GKKKLLKK 1093

Query: 862  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            C +     A+  ++  G+ I   D+ +S+ +  Y   +  +   + D    W++  EILD
Sbjct: 1094 CEYKDIPEAIVSIKISGNRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITCSEILD 1153

Query: 921  DDIYLGAENNFNLFTVRKNSEGATDE------------------ERGRLEVVGEYHLGEF 962
                + A+   ++F +R   E   DE                  +  +LE +  +H+GE 
Sbjct: 1154 HHTIMAADKFDSVFILRVPEEAKQDEYGITNKCWYGGEIMNSSTKNRKLEHMMSFHIGEI 1213

Query: 963  VNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVIK 1021
            V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR    
Sbjct: 1214 VTSMQKVRLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKP 1266

Query: 1022 GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
             + G  H  +RS+ +       +N +DGDL E F  LS     +I+  +  + E++ +++
Sbjct: 1267 PLCGREHIFFRSYYHP-----VQNVVDGDLCEQFSSLSYDAQKKIANDLERTPEDILRKL 1321

Query: 1082 EEL 1084
            E++
Sbjct: 1322 EDI 1324



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T +  GNF+ P+   +I+AK   +E+     QG L  ++   I+G I +
Sbjct: 5   YHLTLQKPTAITKTVYGNFSGPRFHEIIVAKGQVLELLRSDKQGKLNVIISKDIFGIIRS 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           +  FR  G  +D++ I ++  +  +L+++ E ++ + R   +   + G R    G+   +
Sbjct: 65  ISTFRLTGSNKDYIVIGSDSGRLVILEYNNEKNDFV-RVHCETYGKTGIRRIIPGEYIAV 123

Query: 124 DPDCR 128
           DP  R
Sbjct: 124 DPKGR 128


>gi|167395195|ref|XP_001741266.1| pre-mRNA-splicing factor rse-1 [Entamoeba dispar SAW760]
 gi|165894222|gb|EDR22283.1| pre-mRNA-splicing factor rse-1, putative [Entamoeba dispar SAW760]
          Length = 1145

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 239/1173 (20%), Positives = 458/1173 (39%), Gaps = 151/1173 (12%)

Query: 16   VTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQG-LQPMLDVPIYGRIATLELFRPHGE 73
            +THS  G+F+    + L++ +  T IE++ +     +  +L   ++  I ++   R   E
Sbjct: 14   ITHSLFGDFSGNGAIELLLVRSQTTIELYRINENDQVSLLLQESVFCMIRSICKIRIGSE 73

Query: 74   AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIIDPDCR--LI 130
            A+D++ I ++     +L +  E ++LI     ++  + G R    G+    DP  R  +I
Sbjct: 74   AKDYILIGSDSGSITLLGYSFEQNKLIP-ICNEIFGKSGIRRVVPGEYICSDPMGRAAMI 132

Query: 131  GLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKPTIVVL------- 180
            G      L  +   DN G++  +  +   +   +    I    G   P    +       
Sbjct: 133  GAIEKQKLVYIFNRDNNGKITISSPLEAHKSNTICYNIIALNVGYDNPIFATIEVDYNEQ 192

Query: 181  YQDNKDARHVKTYEVALKDKDF--------VEGPWSQNNLDNGADLLIPVPP--PLC--G 228
            Y  + + R +K Y V L + D         V  P     +D  ++ LIP+      C  G
Sbjct: 193  YLSHIEHRIIKKY-VVLYELDLGLNHVIRKVAEP-----IDPTSNYLIPILSLNEECHYG 246

Query: 229  VLIIGEETIVYCSANAFKA-IPI---------RPSITKAYGRVDADGSRYLL--GDHAGL 276
            + I  E+ I + +    K  IPI           ++  ++      G  ++L   +   L
Sbjct: 247  IFICSEDKITWFNIGHDKVCIPIPKYHNQSNTHSTLITSHVMRTHKGKHFVLLQSEFGDL 306

Query: 277  LHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL--------IKL 328
              LL  T EK ++  + I       IA ++ +     +     YGDS L        I +
Sbjct: 307  FQLLFDTKEKGQLDNIHIRYFDSIPIALSLQFSKRGHLLCIGEYGDSILYNIISMENINV 366

Query: 329  NLQPDAKGSY--------VEVLERYVNLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSL 379
             L+ + +  +        +E   R+ +L P++D  V      Q   ++    G     ++
Sbjct: 367  PLEKNGRLEFERHEEILNLEEFYRFKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTI 426

Query: 380  RIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            +I++N +   +   +EL  I   +W L+  TD+ +  +L +S+ + T +L +  EDE+ E
Sbjct: 427  KILKNQLNTLDAVEIELPAIPISVWPLKKETDE-YHQYLAISYSNITTLLKIT-EDEMSE 484

Query: 439  TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA 498
                     T +L          +QV +  + + S   ++   E +         A+ N 
Sbjct: 485  CNTTPILLSTPSLLVSMLSDGTFLQVMTDRIIVYSEPIQQFITENQK-----YVCASCNG 539

Query: 499  SQVLLATGGGH---LVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 555
            S+++++    +   L+Y +   G L  ++  +   +I+ L ++    +PS  Q  A+G  
Sbjct: 540  SELIVSVEKNNQTALIYFQYQSGHLLTMERKENLAKITALALDQF--HPS--QHCAIGC- 594

Query: 556  TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGI---SYLLCALGDGHLLNFLLN 611
             D SV + SL P+        +  +    SV    F  I   SYL   L +G L     +
Sbjct: 595  VDGSVHLLSLIPNETTKALSRVSLQTYDCSVNSLTFNIIDNKSYLFAGLSNGLLGRSTYD 654

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
              +GE+ +     +G++P+TL          V A S R  + Y +  K+  + +N++  +
Sbjct: 655  PISGEINESSLNFVGSRPVTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTT 714

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC 730
              C        +++AI  E  + I TI+     L  ++I L   PR+I          I 
Sbjct: 715  LACGILVPFVDNAIAIICEKVMKIITIESTSSSLTGKNIQLSYTPRKIITHPTIPLLYIL 774

Query: 731  SLKNQSCAEESEM---------HFVRLLDDQTFEFISTYPLDTFEY---GCSILSCSFSD 778
               N SC   +E+           + +LD    E I     D  ++   GC + S S   
Sbjct: 775  EGDNNSCKVGNEIIQTNEGNWVGGIHILDASQDELIQFIDFDNNKHPTAGCVVRSIS--- 831

Query: 779  DSNVYYCVGTAYVLPEENEPTKGR---ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
             +  Y  VG   +   +  P + +   I V+I+ +  +      + +  V +   F G +
Sbjct: 832  KNQTYLIVGV--IESYKTRPIQWKSSEIQVYIINEHSINYCYSTKVEYPVRAFAEFKGMV 889

Query: 836  LAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            LA +   ++LY    K +L+    R+L S+           +   G+ I++  +    +L
Sbjct: 890  LAGVGNVLRLYDIGLKSLLKKAEKRQLASDVAQ--------LHVIGETILLTGISDGFNL 941

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF----------------- 934
            + Y       +  A D    W+     L+    L ++    +F                 
Sbjct: 942  IRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEIEEKALSPFS 1000

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
            T+ +  +   +    ++    ++ +G+    F   SL+   P          IF   N +
Sbjct: 1001 TLLQPHKTIYEGSNYKMVTATQFFIGDIATSFAQCSLIPGAPS---------IFLYSNFM 1051

Query: 995  IGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
             G+ A +P        F + L+ ++R     +   NH  +RS       V  K+ +DGDL
Sbjct: 1052 GGLSALIPLQNQNDIDFYQHLEMHMRVHWTNLTDRNHISFRS-----SMVPVKDTVDGDL 1106

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             E +  L      EI++ M   V E+ K++ +L
Sbjct: 1107 CELYERLPYEIQQEIAEEMEKEVNEIIKKLHDL 1139


>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
 gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
          Length = 991

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 237/1112 (21%), Positives = 436/1112 (39%), Gaps = 157/1112 (14%)

Query: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
            M ++N+  T+   T+   S +G FT  Q+L  +IA    +E  +   + ++ +     +G
Sbjct: 1    MYLYNF--TSKASTSSVSSIIGQFTKKQQL--VIATANTLETWIQQDEKIEKVRSQFSFG 56

Query: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120
             I  LE  RP G  +D L I ++     V ++  E  E +       S    R    G+ 
Sbjct: 57   IIQKLEKLRPLGFDRDLLVITSDSGNLTVCEFKHE--EFVPLFHEPHSKNGLRSITPGEY 114

Query: 121  GIIDPDCRLIGLHLYDG---LFKVIPFDNKGQLKEAFN-IRLEELQVLDIKFLYGCAKPT 176
              IDP  R I +   +    L++V   + +  L      +      +       G   P 
Sbjct: 115  LDIDPHNRAIMISAVERNKLLYRVHVENERVSLSSPLECLSNNTFTLCTCAVDNGFNNPL 174

Query: 177  IVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEET 236
               +  D+     +  YE+   D+          ++   A+LLIP      G+++  +  
Sbjct: 175  FAAIEIDSNKKTVLNYYEL---DQGLNHVMKRTEDVPESANLLIPFD----GLMVCCDGF 227

Query: 237  IVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL 296
            I++       A P +  I         +    LL +  G L          KV   +I  
Sbjct: 228  ILHNGKEL--AFPKKSKIVNYVIHKLKNDFFVLLQNEFGDLF---------KVDTDQINY 276

Query: 297  LGETSIASTISYLDNAVVYIGSS-----YGDSQLIKLNLQPDAKGSYVEVLERYVNLGPI 351
             G   ++  I+   N  +Y   S     Y     +K++         +E+++   +L PI
Sbjct: 277  FGHLPVSVAINIFKNGHLYANCSNTNKLYCQITGLKVSRSTSDNLENLELVQTIESLDPI 336

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTD 410
            +D  + D        ++T +      S++ + +G+         L      +++ + + D
Sbjct: 337  LDIKLKD------SHLITANST----SVKTLVHGVPTTTIVESPLPSSPLKIFTTKLTRD 386

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
            D  D +LV+S  SET +L++   +E+ E     F S+  T+         L+QV S  ++
Sbjct: 387  DVNDAYLVIS-SSETSVLSIG--EEVAEVTDSKF-SKDPTILVQQVGKMALIQVYSNGIK 442

Query: 471  LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILTEVKHAQL 528
             ++    E   +W  P G ++  A++N  Q+++      ++Y E+   D ++      +L
Sbjct: 443  HING---EKVTDWFPPAGINIIKASSNNQQLIIGLTNNEVIYFEVDVDDQLVEYQDKVEL 499

Query: 529  EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLC 588
               I+ L I         S+  AV    D +V++ SL   N +       EI+   +L  
Sbjct: 500  PTNITALAI---------SKDFAVAGCADETVQVISLKQQNCL-------EILSMQMLSS 543

Query: 589  AFEGISY----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 644
                I +    +   + +G  +   ++ + G+L++ +   LGT+PI L    SK    + 
Sbjct: 544  NSSAIEFSEQEVHIGMENGLFVRTNIDAR-GKLSNTRVKYLGTKPIRL----SKINDSIL 598

Query: 645  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG-ELTIGTIDDIQK 703
            A S +P V + +N       +N  +++    F S        +   G +L I TIDD + 
Sbjct: 599  AISSKPWVGFKTNGNFNIVPLNDIDITDGTSFYSEDIGGEGIVGFRGNDLIIFTIDDFRN 658

Query: 704  LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLD 763
              I S       + +   E      + SL  +      E                     
Sbjct: 659  NFIISTEDIPATKLLVDNE------VYSLGKELVRNNKE--------------------- 691

Query: 764  TFEYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETK 822
             F +  S LS C F D    Y  VG          P       F+     ++L+ + E +
Sbjct: 692  KFAFEESPLSICRFKD----YVVVGVT-------NPN------FLYTFKDMKLVHKTEVE 734

Query: 823  GAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGD 878
                S+  FNG+LL  ++  ++ Y    K +LR   T        H   I+ +  Q + D
Sbjct: 735  MPPRSILEFNGRLLVGMDNLLRTYDLGKKQLLRKSST-----AIKHINKIIRIVYQGK-D 788

Query: 879  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 938
             IVVGD   + S +  K  E +    + D     ++++  LD D  +G +   N+F  R 
Sbjct: 789  RIVVGD--SNNSTIFCKFIENSFVPISDDTMNRQITSLSTLDYDTVIGGDKFGNVFVNRI 846

Query: 939  N-------SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 991
                     E   +   GR + + E+ L +    F  G+LV+  P+        +I+  +
Sbjct: 847  KYDNTYFVEESYLNGSSGRCQTLAEFFLNDIPMSFTKGTLVLGGPE-------VIIYAGL 899

Query: 992  NGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
             G IG++  +    + FL  L   L K +  + G +H ++R + N        N +DGD+
Sbjct: 900  QGTIGILLPISESDFKFLSNLSIELNKDL--LLGRDHMKFRGYYNS-----THNVIDGDI 952

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
            IE FL+L+ +   +IS  +N SV E+  ++ +
Sbjct: 953  IEKFLELNASSRIKISNKLNKSVREIENKIND 984


>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
          Length = 650

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 149/662 (22%), Positives = 275/662 (41%), Gaps = 117/662 (17%)

Query: 518  GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
            G L E  +  ++  ++ C+ +  +      S+  AVG+  D +VRI SL   + +  + L
Sbjct: 5    GQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPL 61

Query: 577  GGEIIP-RSVLLCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTD 619
              + +P +   LC  E                G  YL   L +G LL  +L+  TG+L+D
Sbjct: 62   SMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSD 121

Query: 620  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 679
             +   LG++P+ L     +    V A S R  + YS   +   + ++ + +     F S 
Sbjct: 122  TRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASE 181

Query: 680  AFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------T 726
              P+ +       L I  ++ +  +  + + PL   PR+ + H E +            T
Sbjct: 182  QCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYT 241

Query: 727  FAICSLKNQSCAEE-------------SEM-------------------------HFVRL 748
             A  + + Q  AEE             +EM                           +R+
Sbjct: 242  EATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRV 301

Query: 749  LDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF- 806
            ++      +    L+  E   S+  C FS+    +Y  VG A  L        G  +   
Sbjct: 302  MNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTY 361

Query: 807  -IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
             +V +G KL+ + +   +    ++  F G++L  + + +++Y     D G ++L  +C  
Sbjct: 362  KLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-E 415

Query: 865  HGHILALYV---QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 921
            + HI A Y+   QT G  ++V D+ +S   + YK  E  +   A D    W++   +LD 
Sbjct: 416  NKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDY 474

Query: 922  DIYLGAENNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFV 963
            D   GA+   N+  VR   N+    DE         +RG L       EV+  YH+GE V
Sbjct: 475  DTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETV 534

Query: 964  NRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKG 1022
               +  +L+        G   ++++ T++G IG++     HE + F + ++ +LR     
Sbjct: 535  LSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPP 587

Query: 1023 VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE 1082
            + G +H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E+ K++E
Sbjct: 588  LCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLE 642

Query: 1083 EL 1084
            ++
Sbjct: 643  DI 644


>gi|414882040|tpg|DAA59171.1| TPA: hypothetical protein ZEAMMB73_269016 [Zea mays]
          Length = 690

 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 196/447 (43%), Gaps = 23/447 (5%)

Query: 330 LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 389
            QP A  + + + E   +L P++D  V +L  +   Q+ T  G     +LRI+R G+ I+
Sbjct: 248 FQPRALKNLMRIDE-IESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAIS 306

Query: 390 EQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 448
           E A   L      +W+++ + +D FD ++VVSF + T +L++   + +EE     F   T
Sbjct: 307 EMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFTNVTLVLSIG--ETIEEVSDSQFLDTT 364

Query: 449 QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 508
            +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 365 HSLAVTLLGEDSLMQVHPNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGG 422

Query: 509 HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 566
            L+Y E+   G L EV+   +  +++CL I P+ E    S+   VG + D ++ I SL P
Sbjct: 423 ELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLVVGSY-DNTIGILSLDP 481

Query: 567 DLNLITKEHLGGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKT 614
           D  L           P S+L    +       G  Y     L   L +G L    ++M T
Sbjct: 482 DDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVT 541

Query: 615 GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 674
           G+L+D +   LG +P  L      +       S RP + Y      L + ++   +    
Sbjct: 542 GQLSDTRSRFLGLRPPKLFPCIVSHRQAKLCLSSRPWLGYIHQGHFLLTPLSCDTLESAS 601

Query: 675 PFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SL 732
            F+S    + +       L I T++ + +  +  +IPL   PR+     + +   +  S 
Sbjct: 602 SFSSDQCSEGVVAVAGDALRIFTVERLGETFNETTIPLRYTPRKFVILPKKKYIPVIESD 661

Query: 733 KNQSCAEESEMHFVRLLDDQTFEFIST 759
           K    AEE E      LD     F+ +
Sbjct: 662 KGAFSAEEREAAKKECLDGCLRAFVPS 688


>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 229/551 (41%), Gaps = 94/551 (17%)

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
            N+ PI+D  VVD   +   Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 462  NIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWT 521

Query: 405  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
            ++    D + +FLV+SF+ ETR+L++ L    + T+  GF     TL C       LVQ+
Sbjct: 522  VKMKVIDSYHSFLVLSFVEETRVLSVGLSFT-DVTDSVGFQPDVSTLACGVVDDGLLVQI 580

Query: 465  TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
                V+L   T+            +   W  P   S+++     + +++AT     +++ 
Sbjct: 581  HKNGVKLCLPTTVAHPEGIPLASPICTSW-FPENISISLGAVGYNLIVVATSSPCFLFIL 639

Query: 515  IGDGI------LTEVKHAQLEYEISCLDI--NPIGENPSY--------SQIAAVGMWTDI 558
                +      + E++H +L+ E+SC+ I      + PS         S  AA+ +  +I
Sbjct: 640  GVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAALLIGVNI 699

Query: 559  SVRIF-------SLPDLNLITKEHL----GGEIIPRSVLLCAFEGIS------------Y 595
              RIF       S+  L+ +  E L     G I   + L  A  G              Y
Sbjct: 700  G-RIFVIGTHKPSVEILSFLPDEGLRILASGAISLTNTLGTAVSGCVPQDARLVLVDRFY 758

Query: 596  LLCALGDGHLLNFLLNMKT---------------------GELTDRKKVS---------- 624
            +L  L +G LL F L   +                      +    K ++          
Sbjct: 759  VLSGLRNGMLLRFELPAASMVFSSELSSHSPSVSSCSVNDADTNLSKNINSPVNLQLIAI 818

Query: 625  --LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 682
              +G  P+ L   S      + A SDRP ++ S+   L Y++++ +  +H+ P  S   P
Sbjct: 819  RRIGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECP 878

Query: 683  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE 742
              +    E  L +  +   ++L+++   LG  PR++ +  +SR   +        ++++ 
Sbjct: 879  MGILFVAENSLHLVEMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLV---MRTELSQDTY 935

Query: 743  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYVLPEENEP 798
               +  +D  +   +S++ L+  E G S+      ++           G A +   E E 
Sbjct: 936  SSDICCVDPLSGSVLSSFKLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAES 995

Query: 799  TKGRILVFIVE 809
            TKGR++V  +E
Sbjct: 996  TKGRLIVLCLE 1006



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 17/124 (13%)

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDV-----GQIPTVIF-------GTVNGVIGVIASLPHE 1004
            Y++GE     + GS   +LP  DV     G    + F       GT+ G I ++  +  E
Sbjct: 1227 YYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSIIMLIPISRE 1286

Query: 1005 QYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
            ++  LE +Q  L   ++   + G +H ++RS  N   +      LDGD++  FL+L+  +
Sbjct: 1287 EHELLEAVQARLAVHQLTAPILGNDHNEFRSREN---SAGVSKILDGDMLAQFLELTSMQ 1343

Query: 1063 MDEI 1066
             + +
Sbjct: 1344 QEAV 1347


>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
          Length = 635

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 146/651 (22%), Positives = 270/651 (41%), Gaps = 116/651 (17%)

Query: 528  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVL 586
            +  ++ C+ +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   
Sbjct: 1    MSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPES 57

Query: 587  LCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
            LC  E                G  YL   L +G LL  +L+  TG+L+D +   LG++P+
Sbjct: 58   LCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPV 117

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 690
             L     +    V A S R  + YS   +   + ++ + +     F S   P+ +     
Sbjct: 118  KLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIST 177

Query: 691  GELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSC 737
              L I  ++ +  +  + + PL   PR+ + H E +            T A  + + Q  
Sbjct: 178  NTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQM 237

Query: 738  AEE-------------SEM-------------------------HFVRLLDDQTFEFIST 759
            AEE             +EM                           +R+++      +  
Sbjct: 238  AEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDL 297

Query: 760  YPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQL 815
              L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ 
Sbjct: 298  VQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEF 357

Query: 816  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV-- 873
            + +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+  
Sbjct: 358  LHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISG 410

Query: 874  -QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
             QT G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N
Sbjct: 411  IQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGN 470

Query: 933  LFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMR 974
            +  VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+  
Sbjct: 471  ICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-- 528

Query: 975  LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
                  G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS
Sbjct: 529  -----PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRS 583

Query: 1034 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            +         KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 584  Y-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 629


>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 163/353 (46%), Gaps = 47/353 (13%)

Query: 204 EGPWSQNNLDNGADLLIPVP---PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITKA 257
           +G WS+  +DNGA++L+ VP       GVL+  E  ++Y +    +    IP R  +   
Sbjct: 81  KGKWSEQ-VDNGANMLVTVPGGGDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAE 139

Query: 258 YGR--VDADGSR------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYL 309
            G   V A   R      +LL    G +  + + HE ++++ LKI+      + S++  L
Sbjct: 140 RGVLIVSAATHRQKSMFFFLLQTEYGDVFKVTLEHENDRISELKIKYFDTIPVTSSMCVL 199

Query: 310 DNAVVYIGSSYGDSQLIKLN--------------------------LQPDAKGSYVEVLE 343
            +  ++  S +G+  L +                             QP    + V + +
Sbjct: 200 KSGFLFAASEFGNHGLYQFQAIGDDADVESSSASLMETEEGFQPVFFQPRGLKNLVRI-D 258

Query: 344 RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGM 402
           +  +L PI+D  V +L  +   Q+    G     S+RI+R G+ I+E A  +L G+   +
Sbjct: 259 QVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQLPGVPSAV 318

Query: 403 WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV 462
           W+++ + +D FD ++VVSF + T +L++   + +EE    GF   T +L       + L+
Sbjct: 319 WTVKKNVNDEFDAYIVVSFANATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLM 376

Query: 463 QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 515
           QV    +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+
Sbjct: 377 QVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEV 427



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 168/370 (45%), Gaps = 54/370 (14%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGR 802
            +R+LD +T        L   E   SI + +F D +      VGTA  L    +     G 
Sbjct: 583  IRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTAKSLQFWPKRSFDAGY 642

Query: 803  ILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 860
            I ++  +EDGK L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  
Sbjct: 643  IHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DLGKRRLLR 697

Query: 861  ECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
            +C +      I++++  T  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 698  KCENKLFPNTIVSIH--TYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASY 755

Query: 918  ILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHL 959
             +D D   GA+   N++ VR                  K  +G  +    ++E + ++H+
Sbjct: 756  HIDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 815

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRK 1018
            G+ V   +  SL+        G    +I+GTV G +G ++A    +   F   L+ ++R+
Sbjct: 816  GDVVTCLQKASLI-------PGGGECIIYGTVMGSLGALLAFTSRDDVDFFSHLEMHMRQ 868

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSV 1074
                + G +H  +RS          K+ +DGDL E F    LDL R   DE+ +T     
Sbjct: 869  EHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG--- 920

Query: 1075 EELCKRVEEL 1084
             E+ K++EE+
Sbjct: 921  -EILKKLEEV 929


>gi|341893349|gb|EGT49284.1| hypothetical protein CAEBREN_30765 [Caenorhabditis brenneri]
          Length = 213

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGAT 944
            M+S+SLL Y+  EG  EE A+D+N+ WM   E +  +  LG E + N+FTV    S   T
Sbjct: 1    MRSVSLLSYRTLEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNMFTVEVDKSRPVT 60

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
            D+ R  LE  G ++LGE         LV +  D+ +     +++GT  G +G++  +   
Sbjct: 61   DDGRYVLEPTGYWYLGELTKVMIRAVLVPQPDDNSIRYTQPIMYGTNQGSLGLVVQIDDM 120

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 1064
               FL  ++  +    K    + H  +RSF   K+      F+DGDLIES LD+ R+R  
Sbjct: 121  YKKFLLSIEKAISDAEKNCMQIEHSTYRSFTYNKRIEPPSGFIDGDLIESILDMDRSRAI 180

Query: 1065 EISKTMNV---------SVEELCKRVEELTRLH 1088
            EI +  N             E+ K +++L+R H
Sbjct: 181  EILEKANTRGWDPSIPKDPVEILKIIDDLSRTH 213


>gi|312380158|gb|EFR26239.1| hypothetical protein AND_07834 [Anopheles darlingi]
          Length = 1503

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 212/481 (44%), Gaps = 67/481 (13%)

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDIQKLH----IRSIPLGEHP 715
            LY+   +K  +   PFN+   P+  L   ++ +L I  +           +R IPL   P
Sbjct: 978  LYARTVMKAFA---PFNNVNCPNGFLYFDEQYQLKISILPTYLSYDSVWPVRKIPLRSSP 1034

Query: 716  RRICHQEQSRTFAICSLKNQSC-------AEESEM----------------HFVRLLDDQ 752
            ++I +  ++R + +     + C        E+ E+                  V L++  
Sbjct: 1035 KQIVYHRENRVYCVVMDAEEICNKYYRFNGEDKELTEENKGERFLYPMGHQFSVVLVNPA 1094

Query: 753  TFEFI--STYPLDTFEYGCSILSCSFSDDS-----NVYYCVGTAYVLPEENEPTKGRILV 805
             +E +  +   L+ +E+  S+ + S + +        Y  VGT +    E+  ++GR+L+
Sbjct: 1095 AWEIVPDTAIALEEWEHVVSLKNVSLAYEGARSGLKEYIAVGTNFNY-SEDITSRGRLLL 1153

Query: 806  F-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 854
            +     + E GK       + +  K+ KG V +++   G L+ A+ QK+  Y W ++DD 
Sbjct: 1154 YDIIEVVPEPGKPLTKHKFKEVIVKDQKGPVSAISHVCGFLVGAVGQKV--YLWQMKDD- 1210

Query: 855  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 914
              +L        +I    + +    I+V D+ KS+SLL ++ E   +   +RDY+   + 
Sbjct: 1211 --DLVGVAFIDTNIFVHQMVSIKSLILVADVYKSVSLLRFQDEFRTLSLVSRDYHPLNVY 1268

Query: 915  AVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-FR--- 967
             VE + D+  LG   A++  NL T     E        RL   G+YHLG+ VN  FR   
Sbjct: 1269 QVEYVVDNTNLGFLVADDQANLITYMYQPESRESFGGQRLLRKGDYHLGQRVNAMFRVQC 1328

Query: 968  --HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 1025
              H S VMR    +     T  F T++G  G +  LP + Y  L  LQ  L        G
Sbjct: 1329 DFHESDVMRR-TLNYDNKHTTFFATLDGGFGFVLPLPEKTYRRLFMLQNVLLTHSPHTCG 1387

Query: 1026 LNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
            LN + +R+    +      ++  +DGDL+ SFL+L      E++K +   +EE+C  + E
Sbjct: 1388 LNPKAYRTIKQSRALPINPSRCVVDGDLVWSFLELPANEKQEVAKKIGTRIEEICADLME 1447

Query: 1084 L 1084
            +
Sbjct: 1448 I 1448



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 133/623 (21%), Positives = 235/623 (37%), Gaps = 157/623 (25%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----------- 49
           +S   ++   H+PT V  S   +F +  E +L+      ++++ + P             
Sbjct: 12  VSTSQFLKEPHEPTAVEFSLTCHFFNHSEKSLVTGGANVLKVYRIIPDADPATREKYSAT 71

Query: 50  ------LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRA 103
                 L+ M    ++G I +L+     G  +D L I+    K  V+Q+D ++ +L T +
Sbjct: 72  RPPNMKLECMASYRLFGNIMSLQSVSLAGSQRDALLISFPDAKLSVVQFDPDNFDLKTLS 131

Query: 104 MGDVSDRIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------- 152
           +    D   R    G   I    +DPD R   + +Y     V+PF     L E       
Sbjct: 132 LHYFEDEDIRGGWTGHYHIPLVRVDPDNRCAVMLVYGRKLVVLPFRKDSSLDEIEMQDVK 191

Query: 153 -----------------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD---- 186
                            ++ I L++L      V+D++FL+G  +PT+++LY+  +     
Sbjct: 192 PIKKTPTLLIAKTPILASYIIELKDLDEKIDNVIDVQFLHGYYEPTLLILYEPVRTFPGR 251

Query: 187 --ARHVKTYEVALK---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-- 239
              R      VAL     +      W+ N+L       +P+  P+ G L++   +++Y  
Sbjct: 252 IAVRSDTCTMVALSLNIQQRVHPVIWTVNSLPFDCLQAVPISKPIGGCLVMCVNSLIYLN 311

Query: 240 -----------CSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK 288
                       SA+     P++P           DG R  L D A    +  I  EK  
Sbjct: 312 QSVPPYGVSLNSSADHSTNFPLKPQ----------DGVRISL-DAA---QVCFIESEKLV 357

Query: 289 VTGLKIELLGETSIAS---TISYLDNAVVYIGSSYGDSQLIK-------LNLQPDAKG-- 336
           ++    EL   T  A    +I   +   +++GS  G+S L++       L +  D  G  
Sbjct: 358 LSLKGGELYVLTLCADSMRSICVCETEYLFLGSRLGNSLLLRFREKDESLVITIDDSGTV 417

Query: 337 ----------------------------SYV-EVLERYVNLGPIVDFCVVD--------- 358
                                       SY+ EV +  +N+GPI    V +         
Sbjct: 418 EKEQKRQRLEEEELEVYGSGYKTSVQLTSYIFEVCDSVLNIGPIAHMAVGERICEEEMEE 477

Query: 359 ------LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------- 405
                 +  +   +VVT SG  K+G+L ++++ I      S  L G   +W++       
Sbjct: 478 GAEVQFVPNKLDVEVVTASGHGKNGALCVLQSSIKPQVITSFGLSGCLDVWTVFDEAAGP 537

Query: 406 ------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 459
                 R   D P      +    E   + +   +E+ E E  GF +   T+   +   N
Sbjct: 538 GGVTGTRKPDDAPPPNHAFMILSQEGATMVLQTGEEINEIENTGFATDVPTIHVGNIGSN 597

Query: 460 Q-LVQVTSGSVRLVSSTSRELRN 481
           + +VQVT+ S+RL+  T R L+N
Sbjct: 598 RFIVQVTTKSIRLLQGT-RLLQN 619


>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
 gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
          Length = 1247

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 183/838 (21%), Positives = 315/838 (37%), Gaps = 106/838 (12%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT--PQGLQPMLDVPIYGRIA 63
           Y +T  +PT    +  G+F    +  ++ A  +R+ I  ++   +G Q +    ++G I 
Sbjct: 4   YALTVKQPTATQDAISGDFLGNGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFGIIR 63

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +  FR  G  +D + I T+  +    ++  +     T           R    G+    
Sbjct: 64  GIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEQSFKTVHFETFGKSGIRRVVPGEYLAA 123

Query: 124 DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-----LQVLDIKFLYGCAKPTIV 178
           DP  R I +   +    V      GQ   A +  LE      L    I    G   P   
Sbjct: 124 DPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNPMFA 183

Query: 179 VLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVPP- 224
            L  D   +    T             YE+ L     V   WS+  +D  A+ L  VP  
Sbjct: 184 TLEVDYSSSETDPTGEAYDEIKKELVYYELDLGLNHIVRK-WSEP-VDRTANTLFRVPGG 241

Query: 225 --PLCGVLIIGEETIVY-----CSANAFK-AIPIRPSITKAYGR-----------VDADG 265
                GVL  GE++I Y       +N  + AIP R   T+   R           +    
Sbjct: 242 PNAPSGVLCCGEDSITYRRIFNNKSNVHRLAIPRREGATEDPNRKRMIIAGTLYSLKGGD 301

Query: 266 SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
             YLL    G +  L +      V  +KI+      IA++I  L    VY     GD  L
Sbjct: 302 FFYLLQTEDGDVFKLTVEAPSGTVDKIKIKYFDTIPIATSICILRAGFVYAACESGDRIL 361

Query: 326 IKL---------------NLQPDAKGSY------------VEVLERYVNLGPIVDFCVVD 358
            +L                   D + S+            +  +E   +L PI+   V +
Sbjct: 362 YELESLGDETEDPVFESDQFPVDPEASFAPPFFKPRALVNLTAVESMPSLNPIMGMEVAN 421

Query: 359 LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFL 417
              +   QV T +G     S R  RN + + +     L Q    +W+ + +++D  DT +
Sbjct: 422 PALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDEADTLI 481

Query: 418 VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV----- 472
           V+     +R L + + D++EE    GF   T TL       + ++Q+    +R +     
Sbjct: 482 VLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQF 539

Query: 473 ----SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA- 526
               +  +     +W  P   ++     N  QV +A   G ++Y E   DG L   +   
Sbjct: 540 PNDDAGATHANLMDWHPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEEI 599

Query: 527 QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDL--NLITKEHLGGEIIPR 583
            L+  I+CL +  + E    +   AVG  +D +VRIF+L PD+  N++    +     P 
Sbjct: 600 SLDSTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIFNLSPDMDGNILRSISVQALTSPP 658

Query: 584 SVLLCAF------EGIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 636
           S L           G S +L   L  G  +  +L+  TG++ D ++  LG +PI     +
Sbjct: 659 SDLTINLMTDRSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVT 718

Query: 637 SKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
                 + A + RP + Y+  +   L  + +N         F+ + F   + ++   EL 
Sbjct: 719 VAGEPGILAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNFDGSQFKGIICVSAN-ELR 777

Query: 695 IGTIDDI------QKLHIRSIP---LGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 743
           I T +D+      + + +R  P   +G H + + +  QS    I + + Q    ++ M
Sbjct: 778 IFTFNDLTDNTTYENISLRYTPRKMVGYHDQGVFYVIQSDNNTISADRRQQLIAQANM 835



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 33/287 (11%)

Query: 807  IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSECG 863
            I  DG+ L+L  E        +L AF GKL+A + + + LY     D G + L  +++  
Sbjct: 954  ISPDGRELELFNETAVSEPPLALLAFKGKLIAGVGRHLCLY-----DCGMKSLLRKAQAP 1008

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDD 921
            +      + ++T+G  +VV D  +S++  ++K +     +     D  +   SA E+LD 
Sbjct: 1009 NSVPTRIVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSISRHTSASEMLDY 1068

Query: 922  DIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            D  +G +   N++ VR   + SE + +   G   +V + +LG   NR     L+     +
Sbjct: 1069 DTTIGGDKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYFTN 1125

Query: 979  DV-----------GQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGL 1026
            D+           G    + +  + G +G +I       +   ++L+ +LR   K + G 
Sbjct: 1126 DIPVSIQKANLISGGDKVIFWAGLQGTLGALIPFTSRRNHKLFQQLELSLRSEDKPLSGR 1185

Query: 1027 NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            +H  +RS+    K+V     +DGDLIE +L LSR + + I+  M  S
Sbjct: 1186 DHLTYRSYYAPVKSV-----IDGDLIERYLVLSRDKRESIAAQMTGS 1227


>gi|356570929|ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 219/516 (42%), Gaps = 92/516 (17%)

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
           GD  ++KL    D +  Y   ++   N+ PI+D  VVD   +   Q+  C G   +GSLR
Sbjct: 443 GDGMVLKLE---DGRLCYTNPIQ---NIAPILDMEVVDYHDEKHDQMFACCGVAPEGSLR 496

Query: 381 IVRNGIGI---NEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           I+RNGI +   +  AS+  QG+ G W++R    D   +FLV+SF+ ETRIL++ L    +
Sbjct: 497 IIRNGINVENLHRTASI-YQGVSGTWTVRMKVTDSHHSFLVLSFLDETRILSVGLSFT-D 554

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
            T+  GF     TL C       LVQ+   +V+L   T                  A+ +
Sbjct: 555 VTDSVGFQPNVCTLACGLVTDGLLVQIHRSTVKLCLPTK-----------------ASHS 597

Query: 498 ASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTD 557
             ++     GG +  +  G   LT                N IG                
Sbjct: 598 EVEIWFFAPGGGITVVACGTISLT----------------NTIG---------------- 625

Query: 558 ISVRIFSLP-DLNLITKEHLGGEIIPRSVLLCAFE---------GISYLLCALGDGHLLN 607
            SV+  S+P D+ L++ +        R+ +L  FE          I+ +  AL   +L+N
Sbjct: 626 -SVKSDSIPQDVRLVSADKYYVLAGLRNGMLLRFEWPAEPCPSSPINMVDTALSSTNLVN 684

Query: 608 FLLNM--KTGELTDRKKV----SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL 661
            + N   K  +L    ++     +G  PI L          +   +DRP +++S+ + L 
Sbjct: 685 SVTNAFDKRNDLPSMLQLIAIRRIGITPIFLVPLGDTLDADIIVLADRPWLLHSARQGLS 744

Query: 662 YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 721
           Y++++ +  +H+ P +   FP  +    E  L +  +   ++L+++   L   PR++ + 
Sbjct: 745 YTSISFQPATHVTPVSCVEFPKGILFVAENSLHLVEMGHGKRLNVQKFHLEGTPRKVLYH 804

Query: 722 EQSRTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779
           ++S+   +    L    C  +     +  +D  +   +S++ L+  E G S+        
Sbjct: 805 DESKMLLVMRTELNCGPCLSD-----ICCVDSLSGSVLSSFRLELGETGKSMELVRVG-- 857

Query: 780 SNVYYCVGTA-----YVLPE-ENEPTKGRILVFIVE 809
           S     VGT+     + +P  E E  KGR+LV  ++
Sbjct: 858 SEQVLVVGTSLSSGPHTMPTGEAESCKGRLLVLCLD 893



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 17/201 (8%)

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
            I VGD    I L  Y  E   +E    D +   ++   ++D D  + ++   ++  +  +
Sbjct: 1023 IAVGDCRDGILLYSYHEEAKKLELLYNDPSQRIVADCILMDADTAVVSDRKGSIAVLCSD 1082

Query: 940  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP---------TVI 987
                    +  + +   Y + E     + GS   RLP  DV   G  P         T+I
Sbjct: 1083 HLEDNAGAQCNMTLSCAYFMAEIAMSIKKGSYSYRLPADDVLEGGNGPKTNVDSLQNTII 1142

Query: 988  FGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
              T+ G I +   L  E+Y  LE +Q  L    +   V G +H ++RS  N    V    
Sbjct: 1143 ASTLLGSIMIFIPLSREEYELLEVVQARLVVHHLTAPVLGNDHHEFRSRENR---VGVPK 1199

Query: 1046 FLDGDLIESFLDLSRTRMDEI 1066
             LDGD++  FL+L+  +   I
Sbjct: 1200 ILDGDILTQFLELTSMQQKMI 1220


>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
 gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
          Length = 1170

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 261/1224 (21%), Positives = 470/1224 (38%), Gaps = 207/1224 (16%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGR 61
            S + Y +T   P+N  HS +G F         I K  + ++ L++   L  ++  P  G+
Sbjct: 7    SPYLYNLTLKPPSNYPHSALGQF---------IPKSKQQQLALISSSHLTLLIADPETGK 57

Query: 62   IA---TLELF-------RPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            ++   +  LF       +      D L + ++     ++Q++ + +E ++     +    
Sbjct: 58   LSVQVSQNLFAVVNAVDKLRFNDHDVLVLTSDSGNLSIIQYEPKRNEFVSICQMPMCKNG 117

Query: 112  GRPTDNGQIGIIDPDCRLI---GLHLYDGLFKVIPFDNKGQLK---EAFNIRLEELQVLD 165
               +  G+   +D   R I    +     L+KV P   K +L    E  ++     Q L 
Sbjct: 118  WSRSYPGEFLAVDSQSRCILVGAVEKNKFLYKVEPGAEKLELSSPVEYVSVVSRGKQPLL 177

Query: 166  IKFLYGC----AKPTIVVLYQD-NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
               L G     A P    L  D  +    +  YE        V+       + N A+ L 
Sbjct: 178  CVSLIGLESAFANPLFAALEFDCEQQVTLLNYYEFDQGMNHVVKHKSKVATVPNDANYLA 237

Query: 221  PVPPPLCGVLIIGEETIVYCS-ANAFKAIP----------IRPSITKAYGRVDADGSRYL 269
            PVP  + GVL+ G   I+Y    N    +P          I   +T A  + +  G   L
Sbjct: 238  PVPGHIGGVLVCGANWIMYDKLGNESILLPLLRRKDQTSVIISHVTHALKKKNY-GFFIL 296

Query: 270  LGDHAGLLHLLVITHE--KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL-- 325
            L +  G L  L+I ++  +E +  ++I       +   ++   N + +  +    SQL  
Sbjct: 297  LQNDLGDLFRLIIDYDSNRELIKDIEITYFDTIPVCYNLNIFKNGLCF-ANCINRSQLLY 355

Query: 326  -------------IKLN--LQPD----AKGSYVE----------VLERYVNLGPIVDFCV 356
                         I++N  +Q D     K  Y E          +++   +L PI D  +
Sbjct: 356  QFEKLGEEISEEDIRINKTVQMDNIQLTKEKYFEFKLKGLDNLALIDVVESLSPITDSIL 415

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK--GMWSLRSSTDDPFD 414
             D        +VT S   K   L+ + +G         +L  IK   +++ ++S +   D
Sbjct: 416  ND------DTLVTLSTKSK---LKTIVHGTPTTTLVESQLP-IKPTNIFTTKTSANAVDD 465

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             +LV++     + L ++L + +EE     F     T+       + +VQ+ S  +R ++ 
Sbjct: 466  EYLVITSTLSFKTLVLSLGEVIEEVNDSEFVLDQPTVAVQQVGKSSIVQIYSNGLRHING 525

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
              +     W  P G +V  AT N  QV L      LVY E  D    +++  Q   E+S 
Sbjct: 526  NKK--VTNWYPPAGITVTHATTNNQQVFLGLSNLELVYFET-DPDDDQLREYQDRLEVSS 582

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG--EIIPRSVLLCAFEG 592
              I  +  +   S  A VG  +D ++ + SL   N +  + L          ++L    G
Sbjct: 583  -PIRSMCISKEQSSFAVVGC-SDETISVISLQRQNCLQVKSLQALSSSANSLIMLTHKPG 640

Query: 593  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPT 651
             + +   + +G  +   ++   G+L+D +   LG +P+TL     S +   V A S +P 
Sbjct: 641  TTLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKPVTLNELKLSDDIIGVLAISSKPW 700

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE----LTIGTIDDI----QK 703
            + Y    K   + +   ++ +   F S        +   G+     ++G  D +    Q+
Sbjct: 701  IGYFHQGKYRCTPLLDIDIINGAFFKSEDIGGDGIVGIHGDNLVIFSVGKEDSLFDPNQE 760

Query: 704  LHIRSIPLGEHPRRICHQEQSRTF------------------------------AICSLK 733
              +  + L   PR+I   +  + F                              A    +
Sbjct: 761  FTVTELNLRYTPRKIVKGDDGKLFVSEVELGIKTPYLSNLTKEVEDTVDPEYYEAFGYER 820

Query: 734  NQSCAEESEMHFVRLLDD----QTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA 789
            +  CA       V+L+ D    QT EF+    +        ++   F  + N+Y  VG  
Sbjct: 821  DSGCAS-----CVQLVQDGEIKQTLEFVKNQRI------VDMIKIQF--NKNLYLVVGVT 867

Query: 790  YVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY-- 846
                E+N      +  F ++  K LQ I + E K    ++  F  +LL A    I LY  
Sbjct: 868  K--HEDN-----LLYTFKIDKKKNLQYIHKTELKYVPQTMEVFQDRLLVASGNSISLYEL 920

Query: 847  --KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
              + +LR   TR           I+ +  Q R D I++ D   SI    +  EE      
Sbjct: 921  GQRQLLRKSLTR-----IDFIQTIVKVTPQPR-DRILLADSANSIVFAKFDQEENQFVSM 974

Query: 905  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG--------------- 949
            A D     ++A + LD D  +G +   N+F  R + E +   ++                
Sbjct: 975  ADDTVKRNITAWKQLDYDTVIGGDKFGNIFVSRLDREESKQIDQNWTVLKQAAKNSPNLN 1034

Query: 950  ----RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 1005
                +L+ + EY++ + +  F+ GS        ++G    +I+  + G IG++  L  + 
Sbjct: 1035 SCVYKLQNLCEYYIPDIITSFQLGSF-------NLGGEECIIYTGLTGTIGILLPLISKS 1087

Query: 1006 YL-FLEKLQTNLR----KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 1060
             +  L  LQ  +     KV   V G NH + RS+ N      AKN  DGD +E +L+L  
Sbjct: 1088 EIELLHDLQLEISAYNDKV--NVAGKNHAKLRSYYNP-----AKNIFDGDFLELYLNLPL 1140

Query: 1061 TRMDEISKTMNVSVEELCKRVEEL 1084
                +I+K +N SV E+ K++ ++
Sbjct: 1141 DEKLKIAKRLNKSVGEVEKKLNDI 1164


>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
           [Chlamydomonas reinhardtii]
 gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
           [Chlamydomonas reinhardtii]
          Length = 1078

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 128/571 (22%), Positives = 235/571 (41%), Gaps = 90/571 (15%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  + + +  +  GNF+ P+   +++++   +E+      G +Q ++   ++G+I +
Sbjct: 4   YSLTLSRASGIQTAVYGNFSGPKAQEVVVSRGKVLELLRPNENGKMQTVVATEVFGQIRS 63

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           L   R  G   D L I ++  +  +++++ + +  + +   +   R G R    GQ   +
Sbjct: 64  LAAVRLTGSTTDHLAIGSDSGRIVLIKFNKDKNVWV-KVHQETFGRSGCRRIVPGQFLAV 122

Query: 124 DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY-----GCAKPT 176
           DP  R  ++G         V+  D    L    +  LE  +   I F       G   P 
Sbjct: 123 DPKGRACMVGAVEKQKFVYVLNRDAAANL--TISSPLEAHKSHHITFSICGMDCGFDNPI 180

Query: 177 IVVLYQDNKDA-------------RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP 223
              +  D  +A             +H+  YE+ L   + V   W++  +DNGA+LLI VP
Sbjct: 181 FAAIELDYSEADQDPTGEAASLAQKHLTFYEMDLGLNNVVR-KWTEP-VDNGANLLIAVP 238

Query: 224 PPL---CGVL--------------IIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGS 266
                  GVL              + G+  ++  S    K         KAY       S
Sbjct: 239 GGADGPGGVLDHEEVRAVIPRRSDLPGDRGVLIVSYATHK--------KKAY-------S 283

Query: 267 RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
            +L+    G ++ + +++E E VT +K++      + ++I+ L    ++  S YG+  L 
Sbjct: 284 FFLVQSEYGDIYKVTLSYEGEAVTEVKVKYFDTIPVTASIAVLKTGFLFAASEYGNHALY 343

Query: 327 KL----NLQPDAKGSYVEV----------------------LERYVNLGPIVDFCVVDLE 360
           +         D + S  ++                      ++   +L PI D  V +L 
Sbjct: 344 QFVGTGEDDDDVESSSAQLVATEEGFQPVFFEPRPLKNLLLIDEMASLMPITDMKVANLL 403

Query: 361 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVV 419
            +   Q+    G     SL ++R G+ + E A   L G    +W++R +  D +D ++VV
Sbjct: 404 GEEIPQIYALCGRGPRASLSVLRPGLAVTELAVSPLPGAPTAVWTVRRAASDEYDAYIVV 463

Query: 420 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 479
           SF + T  L  ++ +E++ET   GF     TL       N ++QV  G +R +    R  
Sbjct: 464 SFANAT--LVFSIGEEVKETNESGFLGTVPTLHTQLLADNSMLQVYPGGLRHIRPDRR-- 519

Query: 480 RNEWKSPPGYSVNVATANASQVLLATGGGHL 510
            NEWK P    +  A +N  QV +A  GG +
Sbjct: 520 INEWKVPGRRVIKAAASNDKQVAIALQGGEV 550



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 38/303 (12%)

Query: 803  ILVFIVEDG--KLQLIAEKETKGAVY-SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 859
            I V+ + DG  +L L+ + +  G V  +L  F G+LLA +   ++LY     D G +++ 
Sbjct: 788  IRVYRLGDGGRRLDLLHKTQVDGGVPGALAGFKGRLLAGVGPTLRLY-----DMGKKKML 842

Query: 860  SECGHHG------HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 913
             +C ++       H+       R          +S+ ++ YK  + A    A D    ++
Sbjct: 843  RKCEYNRWTNIFLHVFFYRPYFRSS-------QESVHMMRYKKADNAFYIFADDVAPRYL 895

Query: 914  SAVEILDDDIYLGAENNFNLFTVRKNSEGAT----DEERGRLEVV-----GEYHLGEFVN 964
            SA+  LD D     +   NL  +R   E +     D   G++        G  H  E + 
Sbjct: 896  SALLPLDYDTIATGDKFGNLVILRLPQEASQQVEDDPTGGKMAAASGKLNGAPHKLEELV 955

Query: 965  RFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIK 1021
            +F  G  +  L  +++  G    +++ TV G IGV+      E   F   L+ +LR+   
Sbjct: 956  KFHVGDTITALQRAEMQAGGQEVLVYSTVMGAIGVVYPFTSREDVDFFSHLEMHLRQENP 1015

Query: 1022 GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
             + G +H  +RS          +N +DGDL   +  +   +   I++ M+ +  E+ K++
Sbjct: 1016 PLAGRDHLAYRS-----AYFPVRNCVDGDLCSQYASIPMKKQQMIAEAMDRTTGEMLKKL 1070

Query: 1082 EEL 1084
            E++
Sbjct: 1071 EDI 1073


>gi|356505471|ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
          Length = 1278

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 222/524 (42%), Gaps = 77/524 (14%)

Query: 312 AVVYIGSSY-------GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQ 364
           A++++ S Y       GD  ++KL    D +  Y+  ++   N+ PI+D  VVD   + Q
Sbjct: 427 ALLWVESGYLAALVEMGDGMVLKLE---DGRLCYINPIQ---NIAPILDMEVVDYHDEKQ 480

Query: 365 GQVVTCSGAYKDGSLRIVRNGIGI---NEQASVELQGIKGMWSLRSSTDDPFDTFLVVSF 421
            Q+  C G   +GSLRI+RNGI +   +  AS+  QG+ G W++R    D   +FLV+SF
Sbjct: 481 DQMFACCGVAPEGSLRIIRNGINVENLHRTASI-YQGVTGTWTVRMRVTDSHHSFLVLSF 539

Query: 422 ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 481
           + ETRIL++ L    + T+  GF     TL C       LVQ+   +V+L   T      
Sbjct: 540 VEETRILSVGLSFT-DVTDSVGFQPNVCTLACGLVTDGLLVQIHKSTVKLCLPTK----- 593

Query: 482 EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIG 541
                  +S  +   +      A GGG +  +  G   LT      +            G
Sbjct: 594 -----AAHSEGIPLPSVEIWYFAPGGG-ITVVACGTISLTNTVGTAIS-----------G 636

Query: 542 ENPSYSQIAAVGMWTDISVRIFSLPDLN--LITKEHLGGEIIPRSVLLCAFEGISYLLCA 599
             P   ++  VG +       + L  L   ++ +     E  P S        I+ +  A
Sbjct: 637 CVPQDVRLVFVGKY-------YVLAGLRNGMLLRFEWPAEPCPSS-------PINIVDTA 682

Query: 600 LGDGHLLNFLLNM--KTGELTDRKKV----SLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
           L   +L+N + N   K  +     ++     +G  P+ L          +   SDRP ++
Sbjct: 683 LSSINLVNSVTNAFDKRNDFPSMLQLIAIRRIGITPVFLVPLGDTLDADIITLSDRPWLL 742

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 713
           +S+   L YS+++ +  +H+ P  S   P  +    E  L +  +   ++L+++   L  
Sbjct: 743 HSARHSLSYSSISFQPSTHVTPVCSVECPKGILFVAENSLHLVEMVHSKRLNMQKFHLEG 802

Query: 714 HPRRICHQEQSRTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
            PR++ + ++S+   +    L   +C  +     + ++D  +   +S++ L+  E G S+
Sbjct: 803 TPRKVLYHDESKMLLVMRTELNCGTCLSD-----ICIMDPLSGSVLSSFRLELGETGKSM 857

Query: 772 LSCSFSDDSNVYYCVGTAY------VLPEENEPTKGRILVFIVE 809
                   S     VGT+       +   E E  KGR+LV  ++
Sbjct: 858 ELVRVG--SEQVLVVGTSLSSGPHTMATGEAESCKGRLLVLCLD 899



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 17/201 (8%)

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
            I VGD    I L  Y  E   +E    D +   ++   ++D D  + ++   ++  +  +
Sbjct: 1029 IAVGDCRDGILLYSYHEEAKKLELLYNDPSLRLVADCILMDADTAVVSDRKGSIAVLCSD 1088

Query: 940  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP---------TVI 987
                    +  + +   Y + E     + GS   RLP  DV   G  P         T+I
Sbjct: 1089 HLEDNAGAQCNMALSCAYFMAEIAMSIKKGSYSYRLPADDVLQGGNGPKTNVDSLQNTII 1148

Query: 988  FGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
              T+ G I +   L  E+Y  LE +Q  L    +   V G +H ++RS  N    V    
Sbjct: 1149 ATTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNEFRSRENR---VGVPK 1205

Query: 1046 FLDGDLIESFLDLSRTRMDEI 1066
             LDGD++  FL+L+  +   I
Sbjct: 1206 ILDGDMLTQFLELTSMQQKMI 1226


>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 145/634 (22%), Positives = 257/634 (40%), Gaps = 125/634 (19%)

Query: 549  IAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS----------- 594
            + AVG + D +VRI SL PD  L +++ + +     P S+L    +              
Sbjct: 20   LLAVGSY-DNTVRILSLDPDDCLQILSVQSVSS--APESLLFLEVQASIGGEDGADHPAN 76

Query: 595  -YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 653
             +L   L +G L   +++M TG+L+D +   LG +P  L + S +  + +   S RP + 
Sbjct: 77   LFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLG 136

Query: 654  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLG 712
            Y        + ++ + +    PF+S    + +       L I  ID + +  +   +PL 
Sbjct: 137  YIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLR 196

Query: 713  EHPRRICHQEQSRTFAIC-SLKNQSCAEESE----------------------------- 742
              PR+   Q + +   I  S +    AEE E                             
Sbjct: 197  YTPRKFVLQPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADD 256

Query: 743  ----------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-D 779
                                  +  +R+LD +T        L   E   S+ + +F D +
Sbjct: 257  EDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKE 316

Query: 780  SNVYYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIAEKETKGAVYSLNAFNG 833
                  VGT   +  +  P K  +  FI     VE+GK L+L+ + + +G   +L  F G
Sbjct: 317  YGTLLAVGTVKGM--QFWPKKNLVAGFIHIYRFVEEGKSLELLHKTQVEGVPLALCQFQG 374

Query: 834  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-LALYVQTRGDFIVVGDLMKSISLL 892
            +LLA I   ++LY     D G + L  +C +       + +QT  D I VGD+ +S    
Sbjct: 375  RLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYC 429

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--------------- 937
             Y+ +E  +   A D    W++A   +D D   GA+   N++ VR               
Sbjct: 430  KYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTG 489

Query: 938  ---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
               K  +G  +    +++ + ++H+G+ V   +  S++        G   ++++GTV G 
Sbjct: 490  GKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMI-------PGGSESIMYGTVMGS 542

Query: 995  IGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
            IG + A    +   F   L+ ++R+    + G +H  +RS          K+ +DGDL E
Sbjct: 543  IGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRS-----AYFPVKDVIDGDLCE 597

Query: 1054 SF----LDLSRTRMDEISKTMNVSVEELCKRVEE 1083
             F    +DL R   DE+ +T      E+ K++E+
Sbjct: 598  QFPTLPMDLQRKIADELDRT----PAEILKKLED 627


>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
          Length = 1171

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 259/1214 (21%), Positives = 469/1214 (38%), Gaps = 186/1214 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGR 61
            S + Y +T   P+N  HS +G F         I +  + ++ L++   L  +   P  G+
Sbjct: 7    SPYLYNLTLKPPSNYPHSVLGQF---------IPRAKQQQLALISSTHLLLLTSDPETGK 57

Query: 62   IAT---LELF-------RPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            ++T     LF       +      D L + T+     ++Q++ + +E ++     +    
Sbjct: 58   LSTKTTQNLFAVVNAVDKLRLNDHDVLVLTTDSGNLSIIQYEPKRNEFVSICQMPMCKNG 117

Query: 112  GRPTDNGQIGIIDPDCRLI---GLHLYDGLFKVIPFDNKGQLK---EAFNIRLEELQVL- 164
               +  G+   +D   R I    +     L+KV    +K +L    E  ++  ++ Q L 
Sbjct: 118  WSRSYPGEFLAVDSQSRCILVGAVEKKKFLYKVEHSGDKLELSSPVEYASVVAQKKQSLL 177

Query: 165  ---DIKFLYGCAKPTIVVLYQDN-KDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLI 220
                I      + P    L  DN +    +  YE        V+       + N A+ L+
Sbjct: 178  CLSMISLESAFSNPLFAALEYDNEQQVTLLNYYEFDQGMNHVVKRKSRVAIVANDANYLV 237

Query: 221  PVPPPLCGVLIIGEETIVY---CSANAFKAIPIRPS--------ITKAYGRVDADGSRYL 269
            PVP  + GVL+ GE  I+Y    S +    +P R S        +T    +  + G   L
Sbjct: 238  PVPGHIGGVLVCGENWIIYDKLGSESIALPLPRRKSQSSVIVTHVTHVLKK-KSYGFFIL 296

Query: 270  LGDHAGLLHLLVITHE--KEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL-- 325
            L +  G L  LVI ++  +E V  ++I       +  ++S   N + +  +    SQL  
Sbjct: 297  LQNEFGDLFRLVIDYDYDRELVKDIEISYFDTIPVCYSLSIFKNGLCF-ANCVNRSQLLY 355

Query: 326  -------------------IKLNLQPDAKGSYVE----------VLERYVNLGPIVDFCV 356
                               I+++  P  K   VE          +++   +L PI D  +
Sbjct: 356  QFEKLGEEIGEEGVGINRRIQMDSIPLTKEKVVEFKLKGLDNLALIDVVESLSPITDSTL 415

Query: 357  VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFD 414
            ++        +VT S   K   L+ + +G       ++S  ++    +++ ++S D   D
Sbjct: 416  IN------DTLVTLSTKSK---LKSIVHGTPTTTLVESSFPIKPT-NVFTAKTSADAMDD 465

Query: 415  TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 474
             +LV++     + L +++ + +EE     F     T+       + +VQV S  +R ++ 
Sbjct: 466  EYLVITSTLAFKTLVLSIGEVIEEVNDSKFVMDQPTVAVQQVGKSSIVQVYSNGLRHING 525

Query: 475  TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISC 534
              +     W  P G ++  AT N  QVLL      LVY E  D    +++  Q   E+S 
Sbjct: 526  KKK--VTNWYPPAGITITHATTNNQQVLLGMSNLELVYFET-DPEDDQLREYQDRLEVSS 582

Query: 535  LDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS 594
              I  +      S  A VG  +D ++ + SL   N +  + L       + L+      S
Sbjct: 583  -PIRSMCIPKEQSSFAVVGC-SDETISVVSLQSQNCLQVKSLQALSSSANSLVMLTHNPS 640

Query: 595  YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPT 651
              L  +G  +G  +   ++   G+L+D +   LG +P+TL     S + T V A S +P 
Sbjct: 641  TTLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKPVTLNELKLSDDITGVLAISTKPW 700

Query: 652  VIYSSNKKLLYSNVNLKEVSHMCPFNS---------AAFPDSLAIAKEGELTIGTIDDIQ 702
            + Y    K   + +   ++ +   F S           + D+L I   G+      D  Q
Sbjct: 701  IGYFYQGKYRCTPLLDIDIINGASFKSEDIGGEGIVGIYDDNLVIFSVGKED-SIFDPNQ 759

Query: 703  KLHIRSIPLGEHPRRICH-QEQSRTFAICSLKNQSCAEESEM----HFVRLLDDQTFEFI 757
            +L +  + L   PR+I    +  + F          A E EM     +V  L       +
Sbjct: 760  ELTVTELNLRYTPRKIVKGGDDDKLF----------ASEVEMGINTPYVSNLTKDVENGV 809

Query: 758  ST--YPLDTFEYGCSILSC-------------SFSDDSNVYYCV-----GTAYVLPEENE 797
                Y    FE G    SC              F  D  +   V        Y++    +
Sbjct: 810  DPEYYEAFGFERGPGCASCVQLIENGEIKQSLEFVKDQRIVDMVKIQFNKNQYLIVGVTK 869

Query: 798  PTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRD 852
              +  +  F ++  + LQ I + + K     +  F  +LL A    I LY    + +LR 
Sbjct: 870  QEENLLYTFKIDKKRNLQYIHKTQLKYVPQVMEVFQNRLLVASGNAISLYELGQRQLLRK 929

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
              TR           I+ +  Q R D I++ D   SI    + +EE      A D     
Sbjct: 930  SLTR-----IDFVQSIVKVSPQPR-DRILLADSANSIVFAKFDNEENQFIPVADDVVKRN 983

Query: 913  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG-------------------RLEV 953
            ++A + LD D  +G +   N+F  R + E +   ++                    +L+ 
Sbjct: 984  ITAWKQLDYDTIIGGDKFGNIFVTRLDREESKQVDQDWTVLKQAAQNSSNLNSCVFKLQN 1043

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLE--- 1010
            + +Y++ + +  F+ GS        ++G    +I+  V G IGV+  L  +  + L    
Sbjct: 1044 LCQYYIPDIITSFQLGSF-------NLGGEECIIYTGVMGTIGVLIPLLSKSEIELVHDL 1096

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
            +LQ  +      V G NH + RS+ N +     KN  DGD +E +  +      +I+K +
Sbjct: 1097 QLQIGIWNDGVNVAGKNHGKLRSYYNPR-----KNVYDGDFLELYFAIPLDVKVKIAKKL 1151

Query: 1071 NVSVEELCKRVEEL 1084
            N SV E+ K++ ++
Sbjct: 1152 NKSVGEIEKKLNDI 1165


>gi|261329035|emb|CBH12013.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
            gambiense DAL972]
          Length = 1270

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 179/800 (22%), Positives = 313/800 (39%), Gaps = 127/800 (15%)

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 406
            N GP+ D  V       +  V+  +G   +G L  VR+ + + +   + + G++ +  + 
Sbjct: 426  NCGPVFDVTVA--ADGSRTSVIAGTGVGLNGGLSFVRSAVSVRQD--IRVTGLQNVRQIS 481

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDE--LEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
             S D      ++ S    +R+    + +   LEE     F ++   L  ++   N  +QV
Sbjct: 482  VSEDT-----IIFSLPGYSRVCRYCVGETMVLEEIHNTFFGTEETLLLEYNNERNVFLQV 536

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSVNVAT-----ANASQVLLATGGGHLVYLEIGDGI 519
            T+            LRN W     Y + V+      A+AS+ LL       +Y+      
Sbjct: 537  TTAG----------LRNVWPDRGEYVIRVSNNDIGHAHASEGLLVFSNPANLYV-FCMKT 585

Query: 520  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
            LT V    L   ISCL +         S    VG W   +V ++ L D  + +K  L   
Sbjct: 586  LTPVATLCLAEAISCLLVFS-------SNSLLVGTWGSCAVHLYELHDGMIQSKVILQCS 638

Query: 580  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT--GELTDRKKVSLGTQPITLRTFSS 637
              P S+ +    G   LL  L +G++ +  ++     GE+ +     L TQP+  R F+ 
Sbjct: 639  ATPCSMCVVFRSGGHRLLVGLHNGYVADVPISGANVYGEMVETM---LTTQPV--RLFNL 693

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE--LTI 695
            ++   V    + P ++  +N     + ++ ++VS          P       + E  L +
Sbjct: 694  ESHAAVLCLGEIPLILIVTNTGFQLTGIDFRDVSACAIMPKMRSPSRYIFFSKSECALIL 753

Query: 696  GTIDDIQKLH------------IRSIP----LGEHPRRICHQEQSRTFAICSLKNQSCAE 739
            G+I  +QKL+            ++ +P    L    RRI  ++Q  +     + N S   
Sbjct: 754  GSITSVQKLNTDYVGLKATATCVKYMPWWNILVLSIRRI-EKDQVVSTMGHEVSNLSVLL 812

Query: 740  ESEMHFVRLLDDQTFEFISTYPL-DTFEYGCSILSCS-FSDDSNVYYCVGTAYVLPEENE 797
            +    F  LL+++   FI    L    E+G    SC   + D+ V   +GT +V P+E  
Sbjct: 813  DEPNSF-ELLENERCAFIDCVALGQANEWG----SCGEVASDAGVVL-IGTTFVFPDEQL 866

Query: 798  PTKGRILVFIVEDGKLQ-------LIAEKETKGAVYS---LNAFNGKLLAAINQKIQLYK 847
                R +   VE  KL+       L   K+ +GA+     +  + G++   I   + LY 
Sbjct: 867  SRSSRFMWCTVEVAKLRTEKTLLRLQGSKDVEGALQCCCIVPNYAGRVALGIGGCVVLYS 926

Query: 848  WMLRDDG-TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
            W   D     E   + G     L   +Q    +IV  D   S   +     +G++   AR
Sbjct: 927  WNAADATFVAEETIQIGTLIVRLIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVAR 986

Query: 907  DYNANWMSAVEILD----DDIYLGAENNFNLFTVR-----KNSEG--ATDEERGRLEVVG 955
            D     +    IL      D+ LG ++ FN F V       NS G  A      +L+   
Sbjct: 987  DPELRGVMDCAILQYESRHDVCLG-DDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTSA 1045

Query: 956  EYHLGEFVNRFRHGSL--------VMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQ 1005
            +YH+G+ +     GS         V+ +P + V  +  P +++GT +G  G I  +  E 
Sbjct: 1046 QYHMGDLITVMHQGSFAPCSVLNDVVPIPATLVRGVCGPQIVYGTSHGAFGAITPISSET 1105

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRS--------------------------FNNEKK 1039
            ++ L+ L+ ++  V+  +GG  H  +R                           FN  ++
Sbjct: 1106 FILLKGLEVSVASVVPPLGGFTHASFREVLRVGQERGASRNASFQVTNPQATELFNRRRR 1165

Query: 1040 TVDAKNFLDGDLIESFLDLS 1059
                +    GD++E FL LS
Sbjct: 1166 RCVPRGVCCGDVVEMFLTLS 1185


>gi|125526594|gb|EAY74708.1| hypothetical protein OsI_02601 [Oryza sativa Indica Group]
          Length = 314

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 82/143 (57%), Gaps = 26/143 (18%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEI------------------ 42
           M  WNYVVTAHK T V  SCVGNFT+P  L+L  +K TRIEI                  
Sbjct: 15  MRPWNYVVTAHKLTVVARSCVGNFTAPDHLDL--SKFTRIEIGVSAYSSGSSGNLPVLRS 72

Query: 43  -HLLTPQGLQPMLDVPIYGRIATLELFRPHGEAQ-----DFLFIATERYKFCVLQWDAES 96
            +LLT QGLQPMLD P+YGRIAT+ELFRP   A      D    ++ ++    +  + E+
Sbjct: 73  EYLLTHQGLQPMLDAPVYGRIATIELFRPCVLASIKFSPDSRAKSSCKFVNAFVYLNQEN 132

Query: 97  SELITRAMGDVSDRIGRPTDNGQ 119
             +I R+  D SD IGRPT+ GQ
Sbjct: 133 RYVICRSGRDASDHIGRPTNKGQ 155



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 7/65 (10%)

Query: 898 EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 957
           +G  +E +RDYN  WM+AVE+LDD +Y+GA+N +NLFTV K          GRL V+G+Y
Sbjct: 153 KGQTDELSRDYNITWMTAVEMLDDYVYIGADNCYNLFTVLK-------RRVGRLLVIGQY 205

Query: 958 HLGEF 962
           HLG+ 
Sbjct: 206 HLGDL 210


>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1247

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 181/835 (21%), Positives = 310/835 (37%), Gaps = 101/835 (12%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT--PQGLQPMLDVPIYGRIA 63
           Y +T  +PT    +  G+F    +  ++ A  +R+ I  ++   +G Q +    ++G I 
Sbjct: 4   YALTVKQPTATQDAISGDFLGTGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFGIIR 63

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGII 123
            +  FR  G  +D + I T+  +    ++  +     T           R    G+    
Sbjct: 64  GIAKFRIAGGTKDHIVITTDSGRLVTYEYLPDEKTFKTVHFETFGKSGIRRVVPGEYLAA 123

Query: 124 DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE-----LQVLDIKFLYGCAKPTIV 178
           DP  R I +   +    V      GQ   A +  LE      L    I    G   P   
Sbjct: 124 DPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNPMFA 183

Query: 179 VLYQDNKDARHVKT-------------YEVALKDKDFVEGPWSQNNLDNGADLLIPVPP- 224
            L  D   +    T             YE+ L     V   WS+  +D  A+ L  VP  
Sbjct: 184 TLEVDYSSSETDPTGEAYDEIKKELVYYELDLGLNHIVRK-WSEP-VDRTANTLFRVPGG 241

Query: 225 --PLCGVLIIGEETIVY-----CSANAFK-AIPIRPSITKAYGR-----------VDADG 265
                GVL  GE++I Y       +N  + AIP R   T+   R           +    
Sbjct: 242 PNAPSGVLCCGEDSITYRRIFNNKSNVHRLAIPRREGATEDPNRKRMIIAGTLYSLKGGD 301

Query: 266 SRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL 325
             YLL    G +  L +      V  +KI+      I ++I  L    VY     GD  L
Sbjct: 302 FFYLLQTEDGDVFKLTVDAPSGTVEKIKIKYFDTIPIVTSICILRAGFVYAACESGDRIL 361

Query: 326 IKLN----------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVV 357
            +L                              +P A  ++  V E   +L PI+   V 
Sbjct: 362 YELESLGDETDDPVFESDQFPVDPDTSFAPPFFKPRALVNFTPV-ESMPSLNPIMGMEVA 420

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTF 416
           +   +   QV T +G     S R  RN + + +     L Q    +W+ + ++ D  DT 
Sbjct: 421 NPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSGDEADTL 480

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV---- 472
           +V+     +R L + + D++EE    GF   T TL       + ++Q+    +R +    
Sbjct: 481 IVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQ 538

Query: 473 -----SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHA 526
                +  +     +W  P   ++     N  QV +A   G ++Y E   DG L   +  
Sbjct: 539 FPNDDADATHANLMDWHPPAHRTIVACATNNRQVAIALSSGQILYFECDSDGSLAMAEEE 598

Query: 527 -QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDL--NLITKEHLGGEIIP 582
             L+  I+CL +  + E    +   AVG  +D +VRIF+L PD+  N++    +     P
Sbjct: 599 ISLDSTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIFNLSPDMDGNILRSISVQALTSP 657

Query: 583 RSVLLCAF------EGIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
            S L   F       G S +L   L  G  +  +L+  TG++ D ++  LG +PI     
Sbjct: 658 PSDLTINFMKDRSPRGESQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKV 717

Query: 636 SS-KNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 692
           +    +  + A + RP + Y+  +   L  + +N         F+ + F   + ++   E
Sbjct: 718 NDVAGSPGILAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNFDGSQFKGIICVSTN-E 776

Query: 693 LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV 746
           L I T +D+       +I L   PR++    +   F +    N + + +     +
Sbjct: 777 LRIFTFNDLTDNTTYENISLKYTPRKMVGYHEQGVFYVIQSDNNTISADRRQQLI 831



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 33/287 (11%)

Query: 807  IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSECG 863
            I  DG+ ++L  E        +L AF GKL+A + + + LY     D G + L  +++  
Sbjct: 954  ISPDGREIELFNETAVSEPPLALLAFKGKLIAGVGRHLCLY-----DCGMKSLLRKAQAP 1008

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDD 921
            +      + ++T+G  +VV D  +S++  ++K +     +     D  A   SA E+LD 
Sbjct: 1009 NSVPTRIVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSVARHTSASEMLDY 1068

Query: 922  DIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            D  +G +   N++ VR   + SE + +   G   +V + +LG   NR     L+     +
Sbjct: 1069 DTTIGGDKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYFTN 1125

Query: 979  DV-----------GQIPTVIFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGL 1026
            D+           G    + +  + G +G +      + +   ++L+  LR   K + G 
Sbjct: 1126 DIPVSIQKANLISGGDKVIFWAGLQGTLGALIPFTSRRTHKLFQQLELTLRSEDKPLSGR 1185

Query: 1027 NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            +H  +RS+    K+V     +DGDLIE +L LS  + + I+  M  S
Sbjct: 1186 DHLTYRSYYAPVKSV-----IDGDLIERYLVLSSDKRESIAGQMTGS 1227


>gi|340054355|emb|CCC48651.1| putative damage-specific DNA binding protein [Trypanosoma vivax Y486]
          Length = 1272

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 176/819 (21%), Positives = 322/819 (39%), Gaps = 124/819 (15%)

Query: 347  NLGPIVDFCV-VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL 405
            N GP+ D  V VD  R     V+  +G    G L ++R+ + + + A+V   G+  +  +
Sbjct: 426  NCGPVFDMTVAVDGPRM---SVIASTGVGLSGGLNLLRSAVNVCQFAAV--HGVVNVKRV 480

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI--EGFCSQTQTLFCHD-AIYNQLV 462
              + +      +++SF   +R+    +   +E  E+    F +  +TL   D +     +
Sbjct: 481  CMAGN-----VIILSFPGYSRVCHFAVGKTMEVVEVYETPFDTLVETLELVDISQGGAFL 535

Query: 463  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTE 522
            QVT+  V  V  T +E  +     PG+  +V  A++        GG LV+       +  
Sbjct: 536  QVTTSGVNAVQGTMQEYIHR----PGHGKSVEHAHSC-------GGMLVFSSYTSICVLA 584

Query: 523  VK--HAQL----EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
            V   H+ +    EYE+S L +         +    VG W   ++ ++ +    +  +   
Sbjct: 585  VNEPHSVITFHSEYEVSSLAM-------VSTTSLLVGEWGSNAISLYDVTAEGVHPRGRF 637

Query: 577  GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT-QPITLRTF 635
                 P SV +  + G S LL  L +G++ + LL+   G+ + +   +L T  P+ L   
Sbjct: 638  TCSATPCSVSVIPYHGTSRLLVGLLNGYVADVLLDDIAGDSSVKVAETLLTLHPVRLFNL 697

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK--EVSHMCPFNSAAFPDSLAIAKEGEL 693
             S N   V    + P VI  S+     + ++L   E+  + P + +         KE  L
Sbjct: 698  QSHNA--VLCLGEVPLVIIVSDNGFQITGIDLYGIELCGIIPSSCSPVRYIFHSKKEQSL 755

Query: 694  TIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--------------SCAE 739
              G I D+Q+L+    PL      + +      F +   +N+                  
Sbjct: 756  IFGNITDVQRLNTNFFPLRATVTLVKYMAWWNVFVMSLRRNERDQILTIMGYELWAPSPL 815

Query: 740  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT 799
              E + + LL+++   F+ +  L     G +  S       N    +GT +  P+E    
Sbjct: 816  RDEQNSLELLENERCVFVESVILG----GGNEWSTGTDALENSAIIIGTTFAFPDEQLSR 871

Query: 800  KGRILVFIVEDGK-------LQLIAEKETKGAVYS---LNAFNGKLLAAINQKIQLYKWM 849
              R +   VE GK       L+    K+ +GA+     +  + G++   IN  + LY W 
Sbjct: 872  SSRFMWCSVEQGKTANEKPQLRQQGSKDVQGALGCCCVVPNYAGRIALGINGCVALYCWN 931

Query: 850  LRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
              D  +  +  E    G IL   +   Q    ++V  D   S S++     +G++   AR
Sbjct: 932  AVD--STFIAEETIGVGMILTRLMPVLQHDMSYLVAFDSRHSSSVIAVDTIQGSLSVAAR 989

Query: 907  DYNANWMSAVEILD----DDIYLGAENNFNLFTVRKNSEGATDEERG-------RLEVVG 955
            D     +    +L     DD+  G ++ FNLF V      AT  +         +L    
Sbjct: 990  DPELRGVMDGTVLHSGARDDMCFG-DDFFNLFCVPHVMPSATSPDAPAAGMPTCKLPTSA 1048

Query: 956  EYHLGEFVNRFRHGSL--------VMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQ 1005
            +YH+G+ +   + GS         V+ +P   +  +  P ++FGT +G  G I  +  E 
Sbjct: 1049 QYHVGDLITAMQQGSFAPCSLSNGVVPVPKVLIPGVCGPQIVFGTTHGSFGTITPVTSET 1108

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNEKKTVD--------------------- 1042
            YL L+ ++  +  V+  +GG +H  +R     N+++ V                      
Sbjct: 1109 YLLLKGIEVAVAAVVPALGGFSHAAYREVLCANQERGVSRNASFEAVNPRAMEVLRERRL 1168

Query: 1043 ---AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
               A+    GDL+E FL LS      + +   + ++  C
Sbjct: 1169 KYVARCVCSGDLVEMFLTLSPDTQLRVIEEAAMHIQRWC 1207


>gi|297810341|ref|XP_002873054.1| hypothetical protein ARALYDRAFT_908112 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318891|gb|EFH49313.1| hypothetical protein ARALYDRAFT_908112 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 114

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 6/103 (5%)

Query: 695 IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF 754
           I  ID  QK ++ +IPLGE+   ICHQ Q+ T+ IC+         S  HFVRLL+DQTF
Sbjct: 13  IIAIDATQKHNVLTIPLGEYASCICHQAQTCTYGICT------GTHSGTHFVRLLEDQTF 66

Query: 755 EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE 797
             +S Y LD +E G SI+SC F+ DSN YYCVGT YV PEE +
Sbjct: 67  NVLSAYTLDPYERGLSIVSCLFTADSNEYYCVGTEYVFPEEED 109


>gi|427780291|gb|JAA55597.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
            cft1 cpsf subunit [Rhipicephalus pulchellus]
          Length = 1237

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 211/507 (41%), Gaps = 76/507 (14%)

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAIAKEGELTIGTID 699
            VF    RP  ++ S++  L  +    +    C  PF++   P   L   K+GEL I T+ 
Sbjct: 735  VFLCGYRPYWLFMSSRGELRCHPMFVDGPIHCFAPFHNVNCPKGFLHFNKQGELRISTLP 794

Query: 700  DI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-------AEESEMHFVR- 747
                      +R +PL   P  + +   S+T+ + + +   C        EE E   +  
Sbjct: 795  THLTYDAPWPVRKVPLRCTPHFVNYHVDSKTYCVVTSQPDPCNHLVRFTGEEKEYELLER 854

Query: 748  -------LLDDQTFEFIS-----TYP-----LDTFEYGCSILSCSFSDDSNV-----YYC 785
                    +D  + + +S     T P     LD +E+   + +   S +        Y  
Sbjct: 855  DSRYIFPTMDKFSLQLLSPVSWETIPNTRVDLDEWEHLTCLKNVMLSSEGTTTGMKGYLA 914

Query: 786  VGTAYVLPEE--------------NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 831
            +GT Y   E+                P  G+ L       K++++  KE KG V +L+  
Sbjct: 915  LGTNYCYGEDVTSRGRIIILDIIDVVPEPGQPLT----KNKIKIVYSKEQKGPVTALSQV 970

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
             G LL+AI QKI  Y W L+D+   EL         I    V T  + I+VGD+ KS+SL
Sbjct: 971  VGFLLSAIGQKI--YIWQLKDN---ELVGVAFIDTQIYIHSVVTVKNLILVGDVFKSVSL 1025

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 946
            L Y+     +   +RD     + AVE   D+  +      AE N  L+  +  S  +   
Sbjct: 1026 LRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAERNLLLYMYQPESRESCGG 1085

Query: 947  ERGRLEVVGEYHLGE-----FVNRFRHGSLVM--RLPDSDVGQIPTVIFGTVNGVIGVIA 999
            +R  L   G++H+G      F  + R G +    R   S V      +  T++G +  + 
Sbjct: 1086 QR--LLRRGDFHVGSPVVSMFRIKCRMGDIAKYDRRAASIVDGRHITMMATLDGSLAYVL 1143

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLD 1057
             +P + Y  L  LQ  L   I    GLN + +R + ++++ +    KN LDG+LI  F+ 
Sbjct: 1144 PVPEKTYRRLLMLQNVLVTNIPHYAGLNPKAYRMYYSQRRFLGNPHKNILDGELIWKFMH 1203

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            LS     E+SK +  +V ++   + E+
Sbjct: 1204 LSFMERSELSKKIGTTVTQITDDLLEI 1230


>gi|340371789|ref|XP_003384427.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Amphimedon queenslandica]
          Length = 1408

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 235/575 (40%), Gaps = 82/575 (14%)

Query: 587  LCAFEGISYLLCALGDGHL-LNF--------LLNMKTGELTDRKKVSLGTQPITLRTFSS 637
            L  +E   Y   A+  GHL L F        L + + G+L    +    + P  LR FS+
Sbjct: 838  LVIYEAFQYT-SAIHPGHLKLRFSKVQHNVILQDKRVGKLAKHFQQQEFSFPPHLRKFSN 896

Query: 638  -KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPDS-LAIAKEGEL 693
                + VF     P  I+ + +  L  +    +  V    PF++   P   L   KE EL
Sbjct: 897  IAGYSGVFVCGPYPHWIFMAARGHLSIHPMYIDGPVQSFAPFDNVNCPSGFLYFNKESEL 956

Query: 694  TIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA----------- 738
             I  +           +R +PL   P  + +  +S+   I +   Q              
Sbjct: 957  RISVLPTQLSYDSYWPVRKVPLKATPHFVGYHMESKVHVIIASTPQPVTVIPDPNGETED 1016

Query: 739  -------------EESEMHFVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV- 782
                          + E ++++LL   ++E I  S Y ++   +   +          + 
Sbjct: 1017 ALETVERDGRFVYSQEETYYLQLLSPTSWETIPHSKYEMEAHYHVTDMKVMRLRSQETLS 1076

Query: 783  ----YYCVGTAYVLPEENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYS 827
                Y  VGT     EE    KG++L+F     I E GK      L+ + ++E K  V  
Sbjct: 1077 GRKEYIVVGTMATFGEELS-AKGKVLIFDVSVVIPEPGKPFSQYRLKNLYDQEQKWPVTG 1135

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 887
            L   NG +L A+ QKI  + W  +D+  ++L +             Q+   FI+ GD+ +
Sbjct: 1136 LECVNGLILTAMGQKI--FMWQFKDN--KDLLAVAFIDAETYIHTAQSIKGFILTGDVTR 1191

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGAT 944
            SI LL Y  +  ++   ++D N   + +   + D   LG   ++++ N+   +   E   
Sbjct: 1192 SIQLLHYNEDRRSLSLISQDPNPMEVFSTTFMIDGKALGFLVSDSDRNITLFQYQPENPA 1251

Query: 945  DEERGRLEVVGEYHLGEFVNRFRH----------GSLVMRLPDSDVGQIPTVIFGTVNGV 994
                  L   G+ H+G  VN F +           S  M++  +D  Q     FGT++G 
Sbjct: 1252 SSGGANLVRCGDIHVGSLVNVFLNIRCKTSAGLGASREMKIALADKRQ--CTFFGTLDGG 1309

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLI 1052
            IG +  +P + Y  L  LQ  + + ++ + GLN + +R+F    + +    +N LDG L+
Sbjct: 1310 IGCLLPIPEKVYRRLSMLQVKMTQGMRHMAGLNPKAFRTFQTRHQYLHNAQRNILDGTLL 1369

Query: 1053 ESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
              +L L+     + SK +  +V ++ + ++E+ ++
Sbjct: 1370 YQYLSLTAKEKFDFSKQIGTTVAQIMEDLKEIDKV 1404



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 121/307 (39%), Gaps = 49/307 (15%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEI----HLLTPQG---LQPMLDVPIYGRIA 63
           H PT V H    +F   ++  + +A  + + I     L    G   L   L+   +G I 
Sbjct: 9   HPPTGVEHCTSCHFVHSEKEQVAVASTSLLRIFDVAQLQRNDGKAKLVQCLEFSFHGNIQ 68

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGR----PTDNGQ 119
           +L+  R     +D L ++    K  +++++ E++ L T +M    D   R      D+  
Sbjct: 69  SLDKVRLRHSDRDCLLLSFNDAKLSIVEYNPETNGLKTVSMHQFEDEEIRGGILHNDSRP 128

Query: 120 IGIIDPDCRLIGLHLYDGLFKVIPFD---------------NKGQLKEAFNIRLEELQ-- 162
           +  +DP+ R   + L+     V PF                +   +   + I L +L   
Sbjct: 129 VVKVDPEGRCAVMLLFGSHLAVCPFQQDLSIDTPLSPSPSLDTHDILPTYTISLRDLPEP 188

Query: 163 ---VLDIKFLYGCAKPTIVVLYQDN----------KDARHVKTYEVALKDKDFVEGPWSQ 209
              + D+ F+ G   PT++ L + +          +D+  +    +   DK      W+ 
Sbjct: 189 LPVIKDMTFIEGYTSPTLLFLSEVSPTWAGRISLRQDSMMLLGLSLNTSDKSHTVI-WTL 247

Query: 210 NNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYL 269
            NL   +  L PVP PL GVL+ G  T++Y + ++       P    +   +    +R+L
Sbjct: 248 KNLPFDSSYLHPVPKPLGGVLVFGANTLIYLNQSS-------PPYGLSLNSITDYTTRFL 300

Query: 270 LGDHAGL 276
           L +   L
Sbjct: 301 LKNEGSL 307


>gi|388579257|gb|EIM19583.1| hypothetical protein WALSEDRAFT_33953 [Wallemia sebi CBS 633.66]
          Length = 986

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 172/367 (46%), Gaps = 20/367 (5%)

Query: 596 LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 655
           +L    DG L  F  +     + D + V++G+ P+ L   +  N   +FA  D P+++  
Sbjct: 549 VLAGSADGSLYAFRFDEHLKSV-DIQTVAIGSTPVCL---TRSNDGLIFALCDVPSIVTL 604

Query: 656 SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EH 714
            N +L YS++N+  ++ +  + +    + + +  +       +    ++HI SI +G + 
Sbjct: 605 DNTRLRYSSININYINGLTSYKTNDMVNYVFVQNDQLKFSRILSTENRVHIHSIEMGADV 664

Query: 715 PRRICHQEQSRTFAICSLKNQSCAEES---EMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
           PR++ ++E    +A+  ++N   ++ +       V+LLD+  +E ++   ++  E    +
Sbjct: 665 PRQVAYKEDR--YAVGCVRNAYRSDRTLYESSSCVKLLDNN-YEQLAQMEMEKDEIVSVV 721

Query: 772 LSCSFSDDSNVYYCVGTAYVLPEEN--EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 829
            S S ++     + VGT Y    E   E TKGR ++ +V+D K  + +     G VY++ 
Sbjct: 722 ESLSIANME--VFVVGTYYNNETEGTEEATKGRFIILLVKDDKFIIASSFLVPGCVYAVC 779

Query: 830 AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 889
             + KL  A+N ++++Y      D T +++    +    + + + + G  +VV D +KS 
Sbjct: 780 GIDQKLAVAVNYQVRVYDIESIRDDTYKMRFIASYGNAFVVVSLTSVGKILVVADFLKSA 839

Query: 890 SLLIYKHEEGAIEERARDYNANWMSAVEILDDD-----IYLGAENNFNLFTVRKNSEGAT 944
             L    E GA+ +   D    W S V  LDD        LGA+  F+LF + + S G T
Sbjct: 840 IYLQLDTERGALTQVGYDTAQRWSSLVVALDDGNEETFTTLGADIRFHLFALDRTSSGIT 899

Query: 945 DEERGRL 951
                +L
Sbjct: 900 SRTLAQL 906



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 181/408 (44%), Gaps = 63/408 (15%)

Query: 54  LDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGR 113
           +D  I+    +L L   H +AQ  L I +  Y+  V++   E ++++    G+       
Sbjct: 20  IDKIIFQTHESLLLTLDHPQAQ--LVILSLSYENGVIKHIVECTKMLVETTGE------- 70

Query: 114 PTDNGQIGIIDPDCRLIGLHLYDG---LFKVIPFDN--KGQLKEAFNIRLEELQVLDIKF 168
           P+      I+D   ++   HL+ G    FK + +D+  K  + +  N +++   VL + F
Sbjct: 71  PSYEYCNSIVDKSTQIGVSHLWQGQLHAFK-LSYDDRRKTHIIDGRNSQIDHSVVLSMAF 129

Query: 169 LYGCA--KPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDN---GADLLIPVP 223
           L      KPT+  L Q       +  +E  +  +D+V+   +   ++     A  ++ V 
Sbjct: 130 LATDKDEKPTLCRLVQSADVDNPLLVFEHLICKEDYVDISQTVLRIETQCPSAQKIVAVE 189

Query: 224 PPLCGVLIIGEETIVY--CSANAFKAIPIRPSIT---------------------KAYGR 260
                VL+IG     Y        K +  + S T                     + Y  
Sbjct: 190 GKKRAVLVIGAFGCEYYEIPKKDLKGVRRKSSTTVTSPQVVDMEHLSVKSPMAAVRGYTA 249

Query: 261 VDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
           V+   + +L+GD  G ++ + I++       L+I L+G +S+AST+ +L +  +++GS  
Sbjct: 250 VNDSCTAWLIGDEKGDIYYISISN------FLEITLVGNSSVASTLQHLGSGFLFLGSQN 303

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
            DS+L+ +   P      +  LE Y NL P+ D  +   +   QGQ+V CSG+ K G LR
Sbjct: 304 EDSKLLVVQTNP----VRIVELENYTNLAPVSDMALTHPDGI-QGQLVVCSGSNKTGKLR 358

Query: 381 IVRNGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLVVSFISETRI 427
           +V  GIG+ +   V L   I  ++ L S         L+VS++S T+I
Sbjct: 359 VVTTGIGLCDIYQVGLGDSISNVFILGS--------HLLVSYLSTTKI 398


>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
 gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
          Length = 688

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 146/702 (20%), Positives = 271/702 (38%), Gaps = 125/702 (17%)

Query: 486  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTE-VKHAQLEYEISCLDINPIGENP 544
            P   S  +      ++L  T   +++ L+ G+  L E  + +++  EI C+ +  + E  
Sbjct: 3    PAVLSFKINQKPYPRLLNFTTNEYILCLQTGE--LNEYTERSEMPAEIMCMALGTVPEGE 60

Query: 545  SYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE------------- 591
              S   AVG+  D +VRI SL   N +T   +     P   L C  E             
Sbjct: 61   QRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSPAESL-CLVEMGHTESTTQGGLD 118

Query: 592  ------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
                        G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + 
Sbjct: 119  DDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQG 178

Query: 640  TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 699
            +  V A S R  + Y    +   + ++ + + +   F+S    + +       L I  ++
Sbjct: 179  SEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALE 238

Query: 700  DIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE------ 740
             +  +  + + PL   PR  + H +  R           T    S + +  AEE      
Sbjct: 239  KLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAG 298

Query: 741  -------SEM-------------------------HFVRLLDDQTFEFISTYPLDTFE-- 766
                    EM                           +R LD    + + + PL   E  
Sbjct: 299  DEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAI 358

Query: 767  YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQLIAEKETKG 823
               ++L  S + D   Y  VG A  L      ++G  +     D     L+ +   +   
Sbjct: 359  MSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTDIDE 418

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVV 882
               +L  F G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V
Sbjct: 419  IPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNIQAMGHRVYV 473

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 942
             D+ +S+  + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++    
Sbjct: 474  SDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHS 532

Query: 943  ATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
             TD+            +RG L       E +  +H+GE +   +  +L+        G  
Sbjct: 533  VTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGS 585

Query: 984  PTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
              +I+ T++G +G        E Y F + L+ ++R     + G +H  +RS         
Sbjct: 586  EALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYP 640

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             KN LDGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 641  VKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 682


>gi|158287218|ref|XP_309311.4| AGAP011340-PA [Anopheles gambiae str. PEST]
 gi|157019545|gb|EAA05261.4| AGAP011340-PA [Anopheles gambiae str. PEST]
          Length = 1434

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 213/484 (44%), Gaps = 73/484 (15%)

Query: 661  LYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTIG------TIDDIQKLHIRSIPLGE 713
            LY+   +K  +   PFN+   P+  L   ++ EL I       + D +    +R IPL  
Sbjct: 957  LYARTVMKAFA---PFNNVNCPNGFLYFDEQYELKISIFPTYLSYDSVWP--VRKIPLRS 1011

Query: 714  HPRRICHQEQSRTFAICSLKNQSC-------AEESEM----------------HFVRLLD 750
             P++I +  +++ + +     + C        E+ E+                  V L+ 
Sbjct: 1012 SPKQIVYHRENKVYCVVMDAEEICNKYYRFNGEDKELTEENKGERFLYPMGHRFSVVLVT 1071

Query: 751  DQTFEFI--STYPLDTFEYGCSILSCSFSDDS-----NVYYCVGTAYVLPEENEPTKGRI 803
               +E +  ++  L+ +E+  ++ + S + +        Y  VGT +    E+  ++GR+
Sbjct: 1072 PAAWEVVPETSINLEEWEHVIALKNVSLTYEGARSGLKEYIAVGTNFNY-SEDITSRGRL 1130

Query: 804  LVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            L++     + E GK       + +  K+ KG V +++   G L+ A+ QK+  Y W ++D
Sbjct: 1131 LLYDIIEVVPEPGKPLTKHKFKEVIVKDQKGPVSAISHVCGFLVGAVGQKV--YLWQMKD 1188

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
            D   +L        +I    + +    I+V D+ KS+SLL ++ E   +   +RDY+   
Sbjct: 1189 D---DLVGVAFIDTNIFVHQMVSIKSLILVADVYKSVSLLRFQEEYRTLSVVSRDYHPLN 1245

Query: 913  MSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN----- 964
            +  VE + D+  LG   +++  NL T     E        RL    +YHLG+ VN     
Sbjct: 1246 VFQVEYVVDNANLGFLVSDDQCNLITYMYQPESRESFGGQRLLRKSDYHLGQQVNCMFRV 1305

Query: 965  --RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 1022
               F    ++ R  + D     T  F T++G IG +  LP + Y  L  LQ  L      
Sbjct: 1306 QCDFHETDVMKRTLNYDNKH--TTFFATLDGGIGFVLPLPEKTYRRLFMLQNVLLTHSPH 1363

Query: 1023 VGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
              GLN + +R+    +K     ++  +DGDL+ SFL+L      E++K +   +EE+C  
Sbjct: 1364 TCGLNPKAYRTIKQTRKLPINPSRCVVDGDLVWSFLELPANEKHEVAKKIGTRIEEICAD 1423

Query: 1081 VEEL 1084
            + E+
Sbjct: 1424 LMEI 1427



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 132/613 (21%), Positives = 239/613 (38%), Gaps = 148/613 (24%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-----------------LQPM 53
           H+ T V  S   +F +  E +L+      ++++ + P                   L+ +
Sbjct: 9   HEATAVEFSLTCHFFNHNEKSLVTGGANVLKVYRVIPDADPATRDKYTAARPPNMKLECV 68

Query: 54  LDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGR 113
               + G I +++     G  +D L I+    K  V+Q+D ++ +L T ++    D   R
Sbjct: 69  ASYRLNGNIKSMQSVSLAGSLRDALLISFPDAKLSVVQFDPDNFDLKTLSLHYFEDEDIR 128

Query: 114 PTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE----------------- 152
               G   I    +DPD R   + +Y     V+PF     L E                 
Sbjct: 129 GGWTGHYHIPMVRVDPDNRCAVMLVYGRKLVVLPFRKDSSLDEIELQDVKPIKKAPMQLV 188

Query: 153 -------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYE 194
                  ++ I L++L      V+DI+FL+G  +PT+++LY+  +        R      
Sbjct: 189 AKTPILASYIIELKDLDEKIDNVIDIQFLHGYYEPTLLILYEPVRTFPGRIAVRSDTCTM 248

Query: 195 VALK---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY------------ 239
           VAL     +      W+ N+L       IP+  P+ G L++   +++Y            
Sbjct: 249 VALSLNIQQRVHPVIWTVNSLPFDCIQAIPINKPIGGCLVMCVNSLIYLNQSVPPYGVSL 308

Query: 240 -CSANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLLVITHEKEK-V 289
             SA+   + P++P   +   R+  D +        + +L    G L++L +  +  + V
Sbjct: 309 NSSADHSTSFPLKP---QDGVRISLDAAQVCFIEPEKLVLSLKGGELYVLTLCADSMRSV 365

Query: 290 TGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK-------LNLQPDAKG------ 336
                     + + S I   ++  +++GS  G+S L++       L +  D  G      
Sbjct: 366 RNFHFNKAAASVLTSCICVCEDEYLFLGSRLGNSLLLRFKEKDESLVITIDDSGAVEKEP 425

Query: 337 ------------------------SYV-EVLERYVNLGPIVDFCV------VDLERQGQG 365
                                   SY+ EV +  +N+GPI    V       D E Q   
Sbjct: 426 KRPRLEEEELEVYGSGYKTSVQLTSYIFEVCDNVLNIGPIAHMAVGERVAEEDAENQPDV 485

Query: 366 Q---------VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------RSSTD 410
           Q         VVT SG  K+G+L ++++ I      S  L G   +W++      R + D
Sbjct: 486 QIVQNKLDIEVVTSSGHGKNGALCVLQSSIKPQVITSFGLSGCVDVWTVFDEAVARRAED 545

Query: 411 DP-FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGS 468
            P    F+++S   E   + +   +E+ E E  GF +   T+   +   N+ +VQVT+ S
Sbjct: 546 GPSTHAFMILS--QEGGTMVLQTGEEINEIENTGFATTVPTIHVGNIGTNRFIVQVTTKS 603

Query: 469 VRLVSSTSRELRN 481
           +RL+  T R L+N
Sbjct: 604 IRLLQGT-RLLQN 615


>gi|427795803|gb|JAA63353.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
            cft1 cpsf subunit, partial [Rhipicephalus pulchellus]
          Length = 726

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 211/507 (41%), Gaps = 76/507 (14%)

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAIAKEGELTIGTID 699
            VF    RP  ++ S++  L  +    +    C  PF++   P   L   K+GEL I T+ 
Sbjct: 224  VFLCGYRPYWLFMSSRGELRCHPMFVDGPIHCFAPFHNVNCPKGFLHFNKQGELRISTLP 283

Query: 700  DI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-------AEESEMHFVR- 747
                      +R +PL   P  + +   S+T+ + + +   C        EE E   +  
Sbjct: 284  THLTYDAPWPVRKVPLRCTPHFVNYHVDSKTYCVVTSQPDPCNHLVRFTGEEKEYELLER 343

Query: 748  -------LLDDQTFEFIS-----TYP-----LDTFEYGCSILSCSFSDDSNV-----YYC 785
                    +D  + + +S     T P     LD +E+   + +   S +        Y  
Sbjct: 344  DSRYIFPTMDKFSLQLLSPVSWETIPNTRVDLDEWEHLTCLKNVMLSSEGTTTGMKGYLA 403

Query: 786  VGTAYVLPEE--------------NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 831
            +GT Y   E+                P  G+ L       K++++  KE KG V +L+  
Sbjct: 404  LGTNYCYGEDVTSRGRIIILDIIDVVPEPGQPLT----KNKIKIVYSKEQKGPVTALSQV 459

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
             G LL+AI QKI  Y W L+D+   EL         I    V T  + I+VGD+ KS+SL
Sbjct: 460  VGFLLSAIGQKI--YIWQLKDN---ELVGVAFIDTQIYIHSVVTVKNLILVGDVFKSVSL 514

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 946
            L Y+     +   +RD     + AVE   D+  +      AE N  L+  +  S  +   
Sbjct: 515  LRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAERNLLLYMYQPESRESCGG 574

Query: 947  ERGRLEVVGEYHLGE-----FVNRFRHGSLVM--RLPDSDVGQIPTVIFGTVNGVIGVIA 999
            +R  L   G++H+G      F  + R G +    R   S V      +  T++G +  + 
Sbjct: 575  QR--LLRRGDFHVGSPVVSMFRIKCRMGDIAKYDRRAASIVDGRHITMMATLDGSLAYVL 632

Query: 1000 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLD 1057
             +P + Y  L  LQ  L   I    GLN + +R + ++++ +    KN LDG+LI  F+ 
Sbjct: 633  PVPEKTYRRLLMLQNVLVTNIPHYAGLNPKAYRMYYSQRRFLGNPHKNILDGELIWKFMH 692

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL 1084
            LS     E+SK +  +V ++   + E+
Sbjct: 693  LSFMERSELSKKIGTTVTQITDDLLEI 719


>gi|72390667|ref|XP_845628.1| damage-specific DNA binding protein [Trypanosoma brucei TREU927]
 gi|62359843|gb|AAX80271.1| damage-specific DNA binding protein, putative [Trypanosoma brucei]
 gi|70802163|gb|AAZ12069.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
            brucei strain 927/4 GUTat10.1]
          Length = 1270

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 178/800 (22%), Positives = 313/800 (39%), Gaps = 127/800 (15%)

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 406
            N GP+ D  V       +  V+  +G   +G L  VR+ + + +   + + G++ +  + 
Sbjct: 426  NCGPVFDVTVA--ADGSRTSVIAGTGVGLNGGLSFVRSAVSVRQD--IRVTGLQNVRQIS 481

Query: 407  SSTDDPFDTFLVVSFISETRILAMNLEDE--LEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
             S D      ++ S    +R+    + +   LEE     F ++   L  ++   N  +QV
Sbjct: 482  VSEDT-----IIFSLPGYSRVCRYCVGETMVLEEIHNTFFGTEETLLLEYNNERNVFLQV 536

Query: 465  TSGSVRLVSSTSRELRNEWKSPPGYSV-----NVATANASQVLLATGGGHLVYLEIGDGI 519
            T+            LRN W     Y +     ++  A+AS+ LL       +Y+      
Sbjct: 537  TTAG----------LRNVWPDRGEYVIRVINNDIGHAHASEGLLVFSNPANLYV-FCMKT 585

Query: 520  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 579
            LT V    L   ISCL +         S    VG W   +V ++ L D  + +K  L   
Sbjct: 586  LTPVATLCLADAISCLLV-------FSSSSLLVGTWGSCAVHLYELHDGMIQSKVILQCS 638

Query: 580  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT--GELTDRKKVSLGTQPITLRTFSS 637
              P S+ +    G   LL  L +G++ +  ++     GE+ +     L TQP+  R F+ 
Sbjct: 639  ATPCSMCVVFHSGGHRLLVGLHNGYVADVPISGANVCGEMVETM---LTTQPV--RLFNL 693

Query: 638  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE--LTI 695
            ++   V    + P ++  +N     + ++ ++VS          P       + E  L +
Sbjct: 694  ESHAAVLCLGEIPLILIVTNTGFQLTGIDFRDVSACAIMPKMRSPSRYIFFSKSECALIL 753

Query: 696  GTIDDIQKLH------------IRSIP----LGEHPRRICHQEQSRTFAICSLKNQSCAE 739
            G+I  +QKL+            ++ +P    L    RRI  ++Q  +     + N S   
Sbjct: 754  GSITSVQKLNTDYVGLKATATCVKYMPWWNVLVLSIRRI-EKDQVVSTMGHEVSNLSVLL 812

Query: 740  ESEMHFVRLLDDQTFEFISTYPL-DTFEYGCSILSCS-FSDDSNVYYCVGTAYVLPEENE 797
            +    F  LL+++   FI    L    E+G    SC   + D+ V   +GT +V P+E  
Sbjct: 813  DEPNSF-ELLENERCAFIDCVALGQANEWG----SCGEVASDAGVVL-IGTTFVFPDEQL 866

Query: 798  PTKGRILVFIVEDGKLQ-------LIAEKETKGAVYS---LNAFNGKLLAAINQKIQLYK 847
                R +   VE  KL+       L   K+ +GA+     +  + G++   I   + LY 
Sbjct: 867  SRSSRFMWCTVEVAKLRTEKTLLRLQGSKDVEGALQCCCIVPNYAGRVALGIGGCVVLYS 926

Query: 848  WMLRDDG-TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 906
            W   D     E   + G     L   +Q    +IV  D   S   +     +G++   AR
Sbjct: 927  WNAADATFVAEETIQIGTLIVRLIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVAR 986

Query: 907  DYNANWMSAVEILD----DDIYLGAENNFNLFTVR-----KNSEG--ATDEERGRLEVVG 955
            D     +    IL      D+ LG ++ FN F V       NS G  A      +L+   
Sbjct: 987  DPELRGVMDCAILQYESRHDVCLG-DDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTTA 1045

Query: 956  EYHLGEFVNRFRHGSL--------VMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQ 1005
            +YH+G+ +     GS         V+ +P + V  +  P +++GT +G  G I  +  E 
Sbjct: 1046 QYHMGDLITVMHQGSFAPCSVLNDVVPIPATLVRGVCGPQIVYGTSHGAFGAITPISSET 1105

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRS--------------------------FNNEKK 1039
            ++ L+ L+ ++  V+  +GG  H  +R                           FN  ++
Sbjct: 1106 FILLKGLEVSVASVVPPLGGFTHASFREVLRVGQERGASRNASFQVTNPQATELFNRRRR 1165

Query: 1040 TVDAKNFLDGDLIESFLDLS 1059
                +    GD++E FL LS
Sbjct: 1166 RCVPRGVCCGDVVEMFLTLS 1185


>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
          Length = 1272

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 161/723 (22%), Positives = 303/723 (41%), Gaps = 104/723 (14%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T    G+F++P+   +++A+   +E++ L   G LQ +    ++G +  
Sbjct: 5   YHLTLKKPTGITTCVQGSFSAPKAQEIVVARSHILELYSLDSNGKLQTVASAEVFGIVRA 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           +  FR  G  +D+L + ++  K  +L++  E  +   R   +   + G R    GQ   +
Sbjct: 65  ISAFRLTGSQKDYLVVGSDSGKLVILEFSLEL-KTFKRVHCETYGKTGVRRIVPGQYLGV 123

Query: 124 DPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAKPTIV 178
           DP  R  ++G         ++  D+K  L  +  +   +   +    +    G   P   
Sbjct: 124 DPKGRAVMVGAVERQKFVYIMNRDSKANLTISSPLEAHKSHSVCFDLVGLEVGFENPIFA 183

Query: 179 VLYQ--DNKDARHVK-----TYEVALKDKDFVEGPWSQNNL--------DNGADLLIPVP 223
            + Q  +N D+  +      T E   K   F E     N++        D  A +L+PVP
Sbjct: 184 SIEQSYENVDSLQIDLDEELTDEALKKGVSFWEMDLGLNHVVKKVTLPVDLTAHMLVPVP 243

Query: 224 PPLCGVLIIGEETIVYCS---ANAFKAIPIRPSITK-------AYG-RVDADGSRYLLGD 272
               GV++  E  +VY +    + + A P R  +++       +Y      D    LL  
Sbjct: 244 GGPGGVIVCCENFLVYKNLDHGDVYCAYPRRLEVSEHAKLLITSYAVHKMKDFFFILLQS 303

Query: 273 HAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL---- 328
             G L+ + + ++  +V  + +       +A+++  L +  +++ S +GD  + +     
Sbjct: 304 EYGDLYKVDLNYDDAQVKEIVVRYFDTVELATSMCILRSGYLFVASEFGDHHVYQFTDLG 363

Query: 329 ---------NLQPDAKGSYVEVLERYV----------NLGPIVDFCVVDLERQGQGQVVT 369
                    +L P +K + +    R +          +L  IVD  VVD+   G  + + 
Sbjct: 364 SNEKDPMCTSLHPHSKSAIIAFKPRVLQNLYETDKLPSLSSIVDMKVVDVMGTGDYEFIM 423

Query: 370 CSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRIL 428
             G + +  L+ +R G+   E A  EL G  + +++++S  +  +D F++VSF   T +L
Sbjct: 424 GCGRWYNSRLKSLRYGLSTEELAFNELPGRPRAVFTIKS-LESNYDEFIIVSFQGNTLVL 482

Query: 429 AMNLEDELEETEIEGFCSQTQTLF-CHDAIYNQ----------------LVQVTSGSVRL 471
           ++   + +EE     F +   TL  C+ + Y+                  VQV     R 
Sbjct: 483 SIG--EAVEEVTDSFFLTSITTLHSCYMSNYHATESLEGRFEGGVSDGIFVQVHDSGFRY 540

Query: 472 VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYE 531
              +  ++  EWK P    V +A  N +Q+LL   GG +VY E+ D  L EV    L  E
Sbjct: 541 ---SHGQVVKEWKVPSTKRVKLADNNLNQLLLVLSGGEVVYFELVDNDLEEVAKRNLSTE 597

Query: 532 ISCLDI-----NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 585
           I+C+ +     +  GE     +   VG   +I +R+  L   L + + + L    +P S+
Sbjct: 598 ITCVALQHTPASKAGERVRKGEFCCVGSIDNI-IRVLKLDKTLKMCSSQLLSNNALPESL 656

Query: 586 LLCAFE---------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
            L   E                 SYL   L +G L+   ++   G L+D++   +GT+ +
Sbjct: 657 ALVTAETGSGSGGGSSGGLGESESYLYVGLNNGILIRNNVD-SLGNLSDQESRFMGTKAV 715

Query: 631 TLR 633
            L+
Sbjct: 716 KLK 718



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 31/282 (10%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 871
            ++L+    TKG +   N +  KLL  AI  ++++Y       G ++L  +  H    L  
Sbjct: 1007 IKLLHVTNTKGWIRCFNNYENKLLLCAIGTRLRMYAL-----GKKQLLLKGEHRS--LTN 1059

Query: 872  Y----VQTRGDFIVVGDLMKSISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
            Y    ++  G  I  GD+ +S+ LL    Y  E G  E  A      W+S +E+LD    
Sbjct: 1060 YGFMDIKVIGSRIYCGDIRESVQLLRIKFYGEETGEFEMTATSTGPRWLSTMELLDYSTV 1119

Query: 925  LGAENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
            + A+   ++F  R  N+E          E   ++HL + V       L     +S  G++
Sbjct: 1120 MAADKFDSVFVARVPNNEDVV--RNNYFEYQNQFHLSDLVTSLSKVKL-----NSVYGEL 1172

Query: 984  PTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 1042
              V++ T+ G +G   +   +  + FL+ L+  L   +  + G   +  RS+        
Sbjct: 1173 --VVYSTILGSLGAFVTFTSKDEVDFLQHLEMLLANELDTLSGREAQMHRSY-----YFP 1225

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +N +DGDL E + +LS     +I+  +NV V E+ K+++ +
Sbjct: 1226 VQNVIDGDLCELYFNLSSDLKAKIANQLNVKVAEVVKKLKNI 1267


>gi|350413821|ref|XP_003490124.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Bombus impatiens]
          Length = 1417

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 233/525 (44%), Gaps = 76/525 (14%)

Query: 627  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 683
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 899  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 958

Query: 684  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 733
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 959  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1018

Query: 734  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 773
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1019 SYYRFNGEDKEFTEEERPERFIYPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1078

Query: 774  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIA 817
             S + +        Y  +GT Y   E+   ++GRIL+F I+E            + + I 
Sbjct: 1079 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1137

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 874
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1138 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1191

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 929
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1192 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1249

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----- 984
            N  LF  +  S  +   +  +L    ++HLG+ VN F      +  P +D          
Sbjct: 1250 NMALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFRIKCRVSDPANDKKHFSGADKR 1307

Query: 985  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV-- 1041
               ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T   
Sbjct: 1308 HVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQGN 1367

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
             A+  +DGDL+  +L L      +++K +   V+E+ + + E+ R
Sbjct: 1368 PARGIIDGDLVWRYLYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1412



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/401 (19%), Positives = 161/401 (40%), Gaps = 78/401 (19%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP--------------- 47
           +++   + H  T V H+    F +  E  L +A    I I  L P               
Sbjct: 1   MYSICKSTHPATGVEHAITCYFFNRSEKCLAVAGANIIRIFRLIPDVDITKKEKYTESRP 60

Query: 48  --QGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG 105
               L+ +    ++G + +++     G  +D L ++    K  V+++D ++ +L T ++ 
Sbjct: 61  PKMKLECLSQYTLHGNVMSMQAVTLVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLH 120

Query: 106 DVSDRIGRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF----------------- 144
              +   R   T++  I I+  DP+ R   + +Y     V+PF                 
Sbjct: 121 YFEEEEIRDGWTNHHHIPIVRVDPEGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKA 180

Query: 145 -DNKGQLKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKT 192
             NK  +  ++ I L+ L+     ++D++FL+G  +PT+++LY+  +        R    
Sbjct: 181 LSNKTPILSSYMIVLKSLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTC 240

Query: 193 YEVALK---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------- 241
             VA+     +      WS +NL       +PV  PL G LI+   +++Y +        
Sbjct: 241 AMVAISLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYGV 300

Query: 242 -----ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKE 287
                A      P++P   +   ++  +GS        R ++   +G L++L +      
Sbjct: 301 SLNSLAETSTNFPLKP---QEGVKISLEGSQVAFISSDRLVISLKSGELYVLSLFADSMR 357

Query: 288 KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            V G   +    + + S +   ++  +++GS  G+S L++ 
Sbjct: 358 SVRGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRF 398



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 14/172 (8%)

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 416
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 507 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 566

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 567 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 624

Query: 476 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
             E         G  +  A+     V L +  G ++ L + +G  T   H Q
Sbjct: 625 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTAKLHVQ 674


>gi|449661926|ref|XP_002167992.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Hydra magnipapillata]
          Length = 1122

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 132/631 (20%), Positives = 267/631 (42%), Gaps = 131/631 (20%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT--------------------PQGL 50
           H PT V H+    F   +E+NL+ A   R+ ++ L                      + L
Sbjct: 9   HPPTVVDHAVRCYFFDSREVNLVTAGGQRLNVYRLCDADMVVSDGDQSSKIVDSVGKRRL 68

Query: 51  QPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM------ 104
           + +    ++G I  +++ R     +D L +A +  K  ++++D  S +L T +M      
Sbjct: 69  ELLASFTLFGNIINMQVVRLGSNVRDSLLLAFKHAKLSIVEFDPLSHDLKTDSMHYFEND 128

Query: 105 ---GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEA-------- 153
              G +S  I  P     +  +DP+ R   + +Y+    V+PF +  +L E+        
Sbjct: 129 EFKGGLSHNIYLP-----LVRVDPEQRCACMLIYNRHLVVLPFKHDIKLDESEELSDGEH 183

Query: 154 -------FNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKD 201
                  + I L  L+     + +++FL+G  +PT++ L++  + +    T  VA++   
Sbjct: 184 IKSVLPSYMIDLHSLEQPLLNITELQFLHGYHQPTLMFLFEPVQTS----TGRVAVRQDT 239

Query: 202 FVEGP-------------WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY--------- 239
           F                 WS  NL     +L P+  P+ GVL+    +++Y         
Sbjct: 240 FCVSAISLNMTEKVHPVIWSVTNLPFDCHMLRPIEKPIGGVLVFASNSLIYLNQSIPPYG 299

Query: 240 CSANAFK----AIPIRPS----ITKAYGRVDADGS-RYLLGDHAGLLHLL-VITHEKEKV 289
            S N+        P++      IT A    DA  + +++L    G +++L +++     V
Sbjct: 300 VSLNSITEGSTMFPLKIQEDVVITLAESSCDAIATDQFILSLKGGEIYVLSLLSDGLRTV 359

Query: 290 TGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL------NLQPDAKGSYVEVL- 342
                E    + +AS + ++++  V++GS  G+S L++       ++   +K + VE + 
Sbjct: 360 RSFHFEKAAGSVLASCVCWIEHGFVFLGSRLGNSLLLRYTEKDSASIAEKSKEAKVEKMY 419

Query: 343 -----------ERYVNLGPIVDFCVVDL---------ERQGQGQVVTCSGAYKDGSLRIV 382
                      +  +N+GPI    + +           RQ   ++V CSG  K+G+L ++
Sbjct: 420 GGGVGGGIIVCDSLLNIGPITKAALGEPAFLSEEFFGSRQIDLEMVCCSGYGKNGTLTVL 479

Query: 383 RNGIGINEQASVELQGIKGMWSL--RSSTD--DPFDTFLVVSFISETRILAMNLEDELEE 438
           +  I      + EL G   MW++  +SS +  + + ++L++S    T +L      E+ E
Sbjct: 480 QRSIRPQVVTTFELPGCVNMWTVCGKSSKESVENYHSYLILSRDDSTMVLKTGA--EITE 537

Query: 439 TEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 497
            +  GF  Q  T+F  + + N+ ++QV   S+ L+  T +   N         +   + +
Sbjct: 538 LDNSGFNVQQPTIFACNHLSNKYILQVCPQSIHLLEDTVQ--INSISLQDTIKITQCSIS 595

Query: 498 ASQVLLATGGGHLVYLEI-----GDGILTEV 523
              V++    G L+YL++     G+G ++ +
Sbjct: 596 DPYVVMVDSTGQLIYLQVIEDSEGNGKISSI 626



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 28/324 (8%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVFIV-----EDG------KLQLIAEKETKGAVYSLNAF 831
            Y  VGT +   E+    KGRIL+F V     E G      K + + +KE KG V ++ A 
Sbjct: 802  YLVVGTTFNYGED-LACKGRILIFDVLEVVPEPGQPLTKTKCKCVYDKEQKGPVTAICAT 860

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            +G ++AA+ QKI  +K+  +D+   +L         +  + +    + IV  D+ +SISL
Sbjct: 861  SGYIIAAVGQKIYAFKY--KDN---DLVGVAFVDSQVFTVNLMAIRNVIVAADISRSISL 915

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 946
            + ++ E  ++   +RD         E   D   +G     AE N  +F+ +   E     
Sbjct: 916  VRFQVEHKSLALVSRDTKTLEAYTSEFFIDGSQVGFVVSDAERNIVIFSYQ--PEALESF 973

Query: 947  ERGRLEVVGEYHLGEFVNRFRHGSLVM--RLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
               RL    + ++G  VN      L+   +       Q   +I  T++G IG++  L  +
Sbjct: 974  GGHRLLQKADINIGSHVNTMMRIKLIQDEQSLSKSSEQRQLIILPTLDGSIGILFPLSEK 1033

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTR 1062
             +  L  LQ  L   +    GLN   +R+ +   +T+    +N LDG L++ +  LS   
Sbjct: 1034 PFRRLTMLQNKLVDCLPHKAGLNPRAFRALDVPLRTLTNPHRNILDGQLLDKYAQLSFQE 1093

Query: 1063 MDEISKTMNVSVEELCKRVEELTR 1086
              +I+K M  +  ++   + ++ R
Sbjct: 1094 RFDIAKKMGTTSGQILDDMMDIER 1117


>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
          Length = 1073

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 33/343 (9%)

Query: 413 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
           +D +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R +
Sbjct: 433 YDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI 490

Query: 473 SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEY 530
            S  R   N W++P   ++     N  QV++A  GG LVY E+   G L E  +  ++  
Sbjct: 491 RSDKRV--NVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPA 548

Query: 531 EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCA 589
           ++ C+ +  I  N   S+  AVG+  D +VRI SL   + +T   + G  IP +   LC 
Sbjct: 549 DVICMALGRIPANEQRSRFLAVGL-ADNTVRILSLDPSDCLTPLTMQG--IPSTPESLCI 605

Query: 590 FE---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
            E                     GI Y+   L +G LL  +L+  TGEL+D +   LGT+
Sbjct: 606 VEMGTNEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTR 665

Query: 629 PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
           P+ L     +    V + S R  + Y+   +     ++ + + +   F+S   P+ +   
Sbjct: 666 PVKLFRIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGIVAI 725

Query: 689 KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAI 729
               L I  ++ +  +  + S PL   PR+ + H + + T+ I
Sbjct: 726 CNNSLRIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYII 768



 Score = 40.4 bits (93), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 9/202 (4%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  ++  + +A+   IE+    P    +  +L    +G
Sbjct: 1   MYLYNITLQRATGITHAVHGNFSGTKQQEIAVARGKIIELLRPDPNTGKVYTLLTCEAFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            + +   FR  G  +D+L + ++  +  VL++   S  +  +   +   + G R    GQ
Sbjct: 61  IVRSFMPFRLTGSNKDYLIVGSDSGRVVVLEY-IPSKNVFEKVQQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
              ++P  R  +IG      L  ++  D++ +L  +  +   +   L    +    G   
Sbjct: 120 YLAVNPKGRAFMIGAVEKQKLVYIMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFDN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVA 196
           P    +  D +DA    T E A
Sbjct: 180 PLFACIEMDYEDADQDSTGEAA 201


>gi|110750698|ref|XP_624382.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Apis mellifera]
          Length = 1415

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 236/527 (44%), Gaps = 80/527 (15%)

Query: 627  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 683
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 897  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 956

Query: 684  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 733
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1016

Query: 734  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 773
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1017 SYYRFNGEDKEFTEEERPDRFIFPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1076

Query: 774  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIA 817
             S + +        Y  +GT Y   E+   ++GRIL+F I+E            + + I 
Sbjct: 1077 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1135

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 874
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1136 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1189

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 929
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1190 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1247

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--------SDVG 981
            N  LF  +  S  +   +  +L    ++HLG+ VN F    +  R+ D        SD  
Sbjct: 1248 NIALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFR--IRCRISDPANDKKHFSDAD 1303

Query: 982  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
            +    ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T 
Sbjct: 1304 KRHVTMYASLDGNLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQ 1363

Query: 1042 --DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
               A+  +DGDL+  +L L      +++K +   V+E+ + + E+ R
Sbjct: 1364 GNPARGIIDGDLVWRYLYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1410



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/401 (19%), Positives = 162/401 (40%), Gaps = 78/401 (19%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP--------------- 47
           +++   + H  T V H+    F +  E  L++A    I +  L P               
Sbjct: 1   MYSICKSTHPATGVEHAITCYFFNRSEKCLVVAGANIIRVFRLIPDVDITKKEKYTESRP 60

Query: 48  --QGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG 105
               L+ +    ++G + +++     G  +D L ++    K  V+++D ++ +L T ++ 
Sbjct: 61  PKMKLECLSQYTLHGNVMSMQAVTLVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLH 120

Query: 106 DVSDRIGRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF----------------- 144
              +   R   T++  I I+  DP+ R   + +Y     V+PF                 
Sbjct: 121 YFEEEEIRDGWTNHHHIPIVRVDPEGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKA 180

Query: 145 -DNKGQLKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKT 192
             NK  +  ++ I L+ L+     ++D++FL+G  +PT+++LY+  +        R    
Sbjct: 181 SSNKTPILSSYMIVLKCLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTC 240

Query: 193 YEVALK---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------- 241
             VA+     +      WS +NL       +PV  PL G LI+   +++Y +        
Sbjct: 241 AMVAISLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYGV 300

Query: 242 -----ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKE 287
                A      P++P   +   ++  +GS        R ++   +G L++L +      
Sbjct: 301 SLNSLAETSTNFPLKP---QEGVKISLEGSQVAFISSDRLVISLKSGELYVLSLFADSMR 357

Query: 288 KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            V G   +    + + S +   ++  +++GS  G+S L++ 
Sbjct: 358 SVRGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRF 398



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 416
           ++VT SG  K+G+L ++++ I      + EL G + MW++  + ++             F
Sbjct: 505 ELVTTSGYGKNGALCVLQHSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 564

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 565 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 622

Query: 476 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 623 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTARLHAQ 672


>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
 gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
          Length = 1300

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 177/412 (42%), Gaps = 45/412 (10%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 405
           +L PI+D  + D   +   Q+    G     +LRI   G  + E A   L G  + +W+L
Sbjct: 401 SLSPIIDMKIADSSGEFGPQIYVACGRGPRSTLRICTYGKAVEEMAETPLPGRPRFIWTL 460

Query: 406 RSS---------------TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 450
           +                  +  + +F+++SFI  T +L++   +++EE     F     T
Sbjct: 461 KKGGTSYILNKETSETLEDEGNYHSFIIISFIDRTLVLSVG--EQVEEISDSPFTLSEST 518

Query: 451 LFCHDA-IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 509
           ++     + N  +Q+    V+L++    E   EWK+P G  +  A +N  Q+ LA  GG+
Sbjct: 519 IYASSMELKNSYLQILETYVKLIT---EEKIYEWKAPDGRHIVAADSNGRQISLALSGGY 575

Query: 510 LVYLEIG--DGI---------LTEVKHAQLEYEISCLDINP-IGENPSYSQIAAVGMWTD 557
           +V LE+   D I         LTE+ H ++ Y+I C+ I   I       +  AVG  TD
Sbjct: 576 IVILEMNTIDLISGTTNSIMGLTELCHREVSYDIICISIQQLIYPTKLCREYVAVGTSTD 635

Query: 558 ISVRIF--SLPDLNL---ITKEHLGGEIIPRSVLLC--AFEGISYLLCALGDGHLLNFLL 610
            SVR++  +  D  L    T+       IP +++L         YLL  L +G LL  ++
Sbjct: 636 NSVRVYWINTADKKLKQTSTQVMPNASSIPENIVLYKPGLNDSLYLLIGLNNGVLLCCIV 695

Query: 611 NMKTGELTDRKKVSLGTQPITLRT--FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 668
           +   G L+D +   LG + I +        N    F  ++RP ++  + + L Y  +  +
Sbjct: 696 DELNGTLSDNRSRFLGGKSIKMVRVGIGEYNKLSTFCMANRPWIVNHNGRSLNYIPIQYR 755

Query: 669 EVSHMCPFNSAAFPDSLAIAKEGELTIGTI--DDIQKLHIRSIPLGEHPRRI 718
            +  + PF++  F +         L I  +  DD        I L   PR++
Sbjct: 756 TLDTVAPFHTKQFKNGFVAVSGTTLVIFQVLYDDSGTFTHSIIKLNYTPRKL 807



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 43/349 (12%)

Query: 762  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP-----EENEPTKGRILVFIVEDGK--LQ 814
            LD  E   S   C F +       VGT Y +       EN  T G  +     D    L+
Sbjct: 964  LDVNEGCISACVCKFDEMDLPCLVVGTTYGMKLRKEYNENSSTLGATIKVYNYDTNFNLK 1023

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL-YV 873
            L+     +     +  + G+LL +IN+ +++Y       G ++L  +C +      L ++
Sbjct: 1024 LVHVTPIENVATCMIGWRGRLLVSINKTLRIYSL-----GKKKLLKKCEYRNIPEVLVWL 1078

Query: 874  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM-SAVEILDDDIYLGAENNFN 932
            +   D I  GD+   + +  Y   +  +   A D    W+ SA EILD    + ++   N
Sbjct: 1079 KVINDRIFAGDIRHGVIIFKYHSVQNRLSIIANDIMPRWLTSACEILDYHTVITSDKFDN 1138

Query: 933  LFTVRKNSEGATDEERG----------------RLEVVGEYHLGEFVNRFRHGSLVMRLP 976
            L   R  +E +++ +                  ++  V  +H+G+ V       L     
Sbjct: 1139 LIVCRVPTEASSNYDFTSNFNSQTNTSSYMKPYQINPVAHFHVGDLVTCIHKNQL----- 1193

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S +G + T+IFGT+ G IG +  + ++  +  L KL+  LR     +   +H  +RS+ 
Sbjct: 1194 -SPLG-VETLIFGTILGSIGTLTPITNKDDVDLLCKLELLLRNESPSLMSRDHLMFRSY- 1250

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                     N +DGDL E+F   S      I+ ++++S++E+ K++++L
Sbjct: 1251 ----YAPVLNVIDGDLCETFTSYSSDVQARIASSLDISIQEIFKKLDDL 1295


>gi|256075924|ref|XP_002574265.1| Splicing factor 3B subunit 3 5' fragment [Schistosoma mansoni]
          Length = 982

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 33/343 (9%)

Query: 413 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 472
           +D +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R +
Sbjct: 433 YDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI 490

Query: 473 SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEY 530
            S  R   N W++P   ++     N  QV++A  GG LVY E+   G L E  +  ++  
Sbjct: 491 RSDKRV--NVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPA 548

Query: 531 EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCA 589
           ++ C+ +  I  N   S+  AVG+  D +VRI SL   + +T   + G  IP +   LC 
Sbjct: 549 DVICMALGRIPANEQRSRFLAVGL-ADNTVRILSLDPSDCLTPLTMQG--IPSTPESLCI 605

Query: 590 FE---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 628
            E                     GI Y+   L +G LL  +L+  TGEL+D +   LGT+
Sbjct: 606 VEMGTNEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTR 665

Query: 629 PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 688
           P+ L     +    V + S R  + Y+   +     ++ + + +   F+S   P+ +   
Sbjct: 666 PVKLFRIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGIVAI 725

Query: 689 KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAI 729
               L I  ++ +  +  + S PL   PR+ + H + + T+ I
Sbjct: 726 CNNSLRIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYII 768



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 9/202 (4%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPIYG 60
           ++ Y +T  + T +TH+  GNF+  ++  + +A+   IE+    P    +  +L    +G
Sbjct: 1   MYLYNITLQRATGITHAVHGNFSGTKQQEIAVARGKIIELLRPDPNTGKVYTLLTCEAFG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQ 119
            + +   FR  G  +D+L + ++  +  VL++   S  +  +   +   + G R    GQ
Sbjct: 61  IVRSFMPFRLTGSNKDYLIVGSDSGRVVVLEY-IPSKNVFEKVQQETFGKSGCRRIVPGQ 119

Query: 120 IGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
              ++P  R  +IG      L  ++  D++ +L  +  +   +   L    +    G   
Sbjct: 120 YLAVNPKGRAFMIGAVEKQKLVYIMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFDN 179

Query: 175 PTIVVLYQDNKDARHVKTYEVA 196
           P    +  D +DA    T E A
Sbjct: 180 PLFACIEMDYEDADQDSTGEAA 201


>gi|270003792|gb|EFA00240.1| hypothetical protein TcasGA2_TC003068 [Tribolium castaneum]
          Length = 1392

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 228/526 (43%), Gaps = 82/526 (15%)

Query: 630  ITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNL--KEVSHMCPFNSAAFPDS-L 685
            I +R F++      VF     P  I+ S +  L ++      EV     FN+   P   L
Sbjct: 877  IKMRYFTNIAGYNGVFVCGANPHWIFMSARGELRTHPMTIDGEVLSFAAFNNVNCPQGFL 936

Query: 686  AIAKEGELTIGTIDD----IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES 741
               ++ EL IG +           +R +PL   P  + +  +S+T+ + +    S AE S
Sbjct: 937  YFNRKSELRIGVLPTHLSYDAAWPVRKVPLRCTPHFVTYHLESKTYCLVT----SIAEPS 992

Query: 742  EMHF---------------------------VRLLDDQTFEFI--STYPLDTFEYGCSIL 772
              ++                           + L    +++ I  +   LD +E+   + 
Sbjct: 993  NKYYKFNGEDKELSVEDRGDRFPYPLQEKFSLMLFSPVSWDVIPNTKIDLDEWEHVNCLK 1052

Query: 773  SCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLI 816
            + S + +        Y  VGT Y   E+   ++GRIL+F I+E            + + I
Sbjct: 1053 NVSLAYEGTRSGLKGYIAVGTNYNYGEDVT-SRGRILIFDIIEVVPEPGQPLTKNRFKEI 1111

Query: 817  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 876
              K+ KG V +L+   G L++A+ QKI  Y W L+D+   +L         I    + T 
Sbjct: 1112 YAKDQKGPVTALSQVKGFLVSAVGQKI--YIWQLKDN---DLVGVAFIDTQIYTHQILTI 1166

Query: 877  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNF 931
               ++V D+ KSISLL ++ E   +   +RD+    + +VE + D+  +G     +E N 
Sbjct: 1167 KSLLLVADVYKSISLLRFQEEYRTLSLVSRDFRPCEVFSVEYMIDNTTMGFLVSDSEKNL 1226

Query: 932  NLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH--------GSLVMRLPDSDVGQI 983
             L+  +  S  +   +R  L    ++HLG+ VN F          G     L  +D   I
Sbjct: 1227 VLYMYQPESRESLGGQR--LLRKADFHLGQAVNSFFRIKCKLGELGEDKKNLTGADKRHI 1284

Query: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK--TV 1041
               ++ T++G +G I  +P + Y  L  LQ  L      + GLN + +R++ + KK  T 
Sbjct: 1285 --TMYATLDGGLGYIMPVPEKTYRRLLMLQNVLVSQGAHIAGLNPKAFRTYKSWKKLQTN 1342

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             A++ +DG+L+ ++L LS     E+SK +   +EEL   + ++ ++
Sbjct: 1343 PARSVIDGELVYNYLQLSIPEKLEVSKKIGTKLEELLDDLSDIQKI 1388



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 116/607 (19%), Positives = 220/607 (36%), Gaps = 163/607 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
            H  T V H+   +F S  E +L+ +    I++  L P                    L+
Sbjct: 8   THPATGVEHAISCHFFSKSEKSLVTSGANVIKVFRLIPDIDTKTRIDKFNETNPPKSKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG--DVSD 109
            +    ++G I +++        +D L +A +  K  V+++D E+ +L T ++   +  D
Sbjct: 68  CVAQYTLFGNIMSMQSVNLANSPRDALLLAFKDAKLSVVEYDPETHDLKTLSLHYFEEDD 127

Query: 110 RIGRPTDNGQIGII--DPDCRLIGLHLYDGLFKVIPFD---------------------N 146
                T +  + ++  DP+ R   + ++     V+PF                      +
Sbjct: 128 MKDGWTHHYHVPMVRADPENRCAVMTVFGRKLVVLPFRRENAIDDTDADIKPMIGGAYGS 187

Query: 147 KGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVA 196
           K  +  ++ I L++       ++DI+FL+G  +PT+++L++  K      A    T  +A
Sbjct: 188 KAPILASYMIVLKDFIDKVDNIIDIQFLHGYYEPTLLILFEPLKTFAGRVAVRTDTCAMA 247

Query: 197 LKDKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS----------- 241
               +  +      WS  NL       +P+  PL G LI     ++Y +           
Sbjct: 248 AISLNLQQKVHPIIWSVANLPFDCVKAVPIKKPLGGTLIFAVNALIYLNQSIPPYGVSLN 307

Query: 242 --ANAFKAIPIRP------SITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLK 293
             A      P++P      S+  A      D +  L      L  L ++      V    
Sbjct: 308 SIAENSTNFPLKPQDDLCISLDCAQATFLEDDTIVLSLKGGELYVLTLLADNMRYVRSFH 367

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL------------NLQPDAK------ 335
            E    + + + IS  +N  +++GS  G+S L++              ++P AK      
Sbjct: 368 FEKAAASVLTTCISVCENNFLFLGSRLGNSLLLRFTEKCNEVITLDETIEPSAKRLKASN 427

Query: 336 --------------------------------------------GSYV-EVLERYVNLGP 350
                                                        SYV EV +  +N+GP
Sbjct: 428 STSENEDDKVLDTLNDCMASDVLDIRDPEELEVYGNQKQASLQISSYVFEVCDSLLNIGP 487

Query: 351 IVDFCV-------------VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 397
             +  +             +DL+     ++VT +G  K+G+L +++  +      +  L 
Sbjct: 488 CGNISLGEPAFLSEEFSENLDLDL----ELVTTAGYGKNGALCVLQKSVRPQIVTTFTLP 543

Query: 398 GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 457
           G   MW++ +  D     FL++S    T IL     DE+ E +  GF +   T++   A 
Sbjct: 544 GCSNMWTVHAGEDK--HAFLILSQEDGTMILQTG--DEINEIDNTGFATHIPTVY---AG 596

Query: 458 YNQLVQV 464
            NQL  +
Sbjct: 597 INQLQHI 603


>gi|91078626|ref|XP_968117.1| PREDICTED: similar to cleavage and polyadenylation specificity factor
            cpsf [Tribolium castaneum]
          Length = 1413

 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 228/526 (43%), Gaps = 82/526 (15%)

Query: 630  ITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNL--KEVSHMCPFNSAAFPDS-L 685
            I +R F++      VF     P  I+ S +  L ++      EV     FN+   P   L
Sbjct: 898  IKMRYFTNIAGYNGVFVCGANPHWIFMSARGELRTHPMTIDGEVLSFAAFNNVNCPQGFL 957

Query: 686  AIAKEGELTIGTIDD----IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES 741
               ++ EL IG +           +R +PL   P  + +  +S+T+ + +    S AE S
Sbjct: 958  YFNRKSELRIGVLPTHLSYDAAWPVRKVPLRCTPHFVTYHLESKTYCLVT----SIAEPS 1013

Query: 742  EMHF---------------------------VRLLDDQTFEFI--STYPLDTFEYGCSIL 772
              ++                           + L    +++ I  +   LD +E+   + 
Sbjct: 1014 NKYYKFNGEDKELSVEDRGDRFPYPLQEKFSLMLFSPVSWDVIPNTKIDLDEWEHVNCLK 1073

Query: 773  SCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLI 816
            + S + +        Y  VGT Y   E+   ++GRIL+F I+E            + + I
Sbjct: 1074 NVSLAYEGTRSGLKGYIAVGTNYNYGEDVT-SRGRILIFDIIEVVPEPGQPLTKNRFKEI 1132

Query: 817  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 876
              K+ KG V +L+   G L++A+ QKI  Y W L+D+   +L         I    + T 
Sbjct: 1133 YAKDQKGPVTALSQVKGFLVSAVGQKI--YIWQLKDN---DLVGVAFIDTQIYTHQILTI 1187

Query: 877  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNF 931
               ++V D+ KSISLL ++ E   +   +RD+    + +VE + D+  +G     +E N 
Sbjct: 1188 KSLLLVADVYKSISLLRFQEEYRTLSLVSRDFRPCEVFSVEYMIDNTTMGFLVSDSEKNL 1247

Query: 932  NLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH--------GSLVMRLPDSDVGQI 983
             L+  +  S  +   +R  L    ++HLG+ VN F          G     L  +D   I
Sbjct: 1248 VLYMYQPESRESLGGQR--LLRKADFHLGQAVNSFFRIKCKLGELGEDKKNLTGADKRHI 1305

Query: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK--TV 1041
               ++ T++G +G I  +P + Y  L  LQ  L      + GLN + +R++ + KK  T 
Sbjct: 1306 --TMYATLDGGLGYIMPVPEKTYRRLLMLQNVLVSQGAHIAGLNPKAFRTYKSWKKLQTN 1363

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             A++ +DG+L+ ++L LS     E+SK +   +EEL   + ++ ++
Sbjct: 1364 PARSVIDGELVYNYLQLSIPEKLEVSKKIGTKLEELLDDLSDIQKI 1409



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 130/654 (19%), Positives = 247/654 (37%), Gaps = 168/654 (25%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
            H  T V H+   +F S  E +L+ +    I++  L P                    L+
Sbjct: 8   THPATGVEHAISCHFFSKSEKSLVTSGANVIKVFRLIPDIDTKTRIDKFNETNPPKSKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG--DVSD 109
            +    ++G I +++        +D L +A +  K  V+++D E+ +L T ++   +  D
Sbjct: 68  CVAQYTLFGNIMSMQSVNLANSPRDALLLAFKDAKLSVVEYDPETHDLKTLSLHYFEEDD 127

Query: 110 RIGRPTDNGQIGII--DPDCRLIGLHLYDGLFKVIPF---------------------DN 146
                T +  + ++  DP+ R   + ++     V+PF                      +
Sbjct: 128 MKDGWTHHYHVPMVRADPENRCAVMTVFGRKLVVLPFRRENAIDDTDADIKPMIGGAYGS 187

Query: 147 KGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVA 196
           K  +  ++ I L++       ++DI+FL+G  +PT+++L++  K      A    T  +A
Sbjct: 188 KAPILASYMIVLKDFIDKVDNIIDIQFLHGYYEPTLLILFEPLKTFAGRVAVRTDTCAMA 247

Query: 197 LKDKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS----------- 241
               +  +      WS  NL       +P+  PL G LI     ++Y +           
Sbjct: 248 AISLNLQQKVHPIIWSVANLPFDCVKAVPIKKPLGGTLIFAVNALIYLNQSIPPYGVSLN 307

Query: 242 --ANAFKAIPIRP------SITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-VTGL 292
             A      P++P      S+  A      D +  +L    G L++L +  +  + V   
Sbjct: 308 SIAENSTNFPLKPQDDLCISLDCAQATFLEDDT-IVLSLKGGELYVLTLLADNMRYVRSF 366

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL------------NLQPDAK----- 335
             E    + + + IS  +N  +++GS  G+S L++              ++P AK     
Sbjct: 367 HFEKAAASVLTTCISVCENNFLFLGSRLGNSLLLRFTEKCNEVITLDETIEPSAKRLKAS 426

Query: 336 ---------------------------------------------GSYV-EVLERYVNLG 349
                                                         SYV EV +  +N+G
Sbjct: 427 NSTSENEDDKVLDTLNDCMASDVLDIRDPEELEVYGNQKQASLQISSYVFEVCDSLLNIG 486

Query: 350 PIVDFCV-------------VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL 396
           P  +  +             +DL+     ++VT +G  K+G+L +++  +      +  L
Sbjct: 487 PCGNISLGEPAFLSEEFSENLDLDL----ELVTTAGYGKNGALCVLQKSVRPQIVTTFTL 542

Query: 397 QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD- 455
            G   MW++ +  D     FL++S    T IL     DE+ E +  GF +   T++  + 
Sbjct: 543 PGCSNMWTVHAGEDK--HAFLILSQEDGTMILQTG--DEINEIDNTGFATHIPTVYAGNL 598

Query: 456 AIYNQLVQVTSGSVRLVSSTS--RELRNEWKSPPGYSVNVATANASQVLLATGG 507
                +VQVTS +VRL+   +  + +  E  SP    V+V + +    LL T G
Sbjct: 599 GNLKYIVQVTSSAVRLLQGINQLQHIPLELGSP---IVHVTSVDPYISLLTTDG 649


>gi|71663721|ref|XP_818850.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
            Brener]
 gi|70884123|gb|EAN96999.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 774

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 159/705 (22%), Positives = 267/705 (37%), Gaps = 134/705 (19%)

Query: 459  NQLVQVTSGSVRLVSSTSRE---LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 515
            N  VQVTS  V  V          +NE      + +  A+A+A+  LL       V +  
Sbjct: 28   NTFVQVTSVGVNFVKGGKGVYIICKNE------FGIQHASADANLRLLVFSSSRFVSVV- 80

Query: 516  GDGILTEVKHAQLEY--EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK 573
               + T    A LE   E+SCL I       S SQ   +G W   +V ++ + D      
Sbjct: 81   --DLNTHHTRASLELDNEVSCLVI-------SSSQGFVIGEWNSGAVCLYEVQD------ 125

Query: 574  EHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD-----------RKK 622
                GEI+ +  + C+    S  +C L   H    ++ +  G + D            ++
Sbjct: 126  ----GEILLKGRIFCSATSCS--MCILSHLHTPRLVVGLLNGYIADISLESMLMGSAARE 179

Query: 623  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 682
              +  QP+ L    S N   V    + P +I   +     + ++  +V+  C     +  
Sbjct: 180  TFIRMQPVQLFNLESHNA--VLCLGEVPLIIILCDTGFQLTGIDFNDVA-ACAIIEGSHI 236

Query: 683  DSLAI---AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ---- 735
             S  I     E  L  G I D++KL+   + L     R+ +      F +   +N+    
Sbjct: 237  SSKYIFLSQSENSLAFGNIVDLKKLNSCFLGLKATVTRVKYIAWWNVFVMSVRRNEKDQI 296

Query: 736  ----------SCAEESEMHF----VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 781
                      S   ++E+      + LL ++   F  T  L     G +        D +
Sbjct: 297  LLLMGHELANSWVPQNELLIELFSIELLGNERCVFFETVVLG----GSNESPNGNEADKD 352

Query: 782  VYYCVGTAYVLPEENEPTKGRILVFIVEDGKL-------QLIAEKETKGAVYS---LNAF 831
                +GT +  P+E  P   R + + VE GKL       + I  K+ +GA+     +  +
Sbjct: 353  KAILLGTTFAFPDEQLPRSSRFIWYSVEQGKLISERPQLRQIGSKDVEGALQCCCIVPNY 412

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH--GHILALYVQTRGDFIVVGDLMKSI 889
             G++   IN  I LY W   D      ++ C       +L ++ Q    ++V  D   S 
Sbjct: 413  VGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIF-QGDASYMVAFDARHSC 471

Query: 890  SLLIYKHEEGAIEERARDYNANW-MSAVEILDDDIY--LGAENNFNLFTVRK-------- 938
              +     +G++E  ARD      M        +IY     ++ +N F + +        
Sbjct: 472  FFIQVDTFQGSLEIVARDSEPRGVMDGTVFQLGNIYNICFGDDYYNFFCLSRGASTLPSA 531

Query: 939  -NSEGATDEERGRLEVVGEYHLGEFVNRFRHGS--------LVMRLPDSDVGQI--PTVI 987
             N+  AT    G+LE   +YHLG+ V   + GS        + + +P + +  I  P V+
Sbjct: 532  SNATSATVSS-GKLETSAQYHLGDMVTAMQLGSFAPCSVTNIAVPIPTTLIPGICGPQVV 590

Query: 988  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS-------------- 1033
            FGT +G  G I  + +E YL L+ L+  +  V+  +GG  H  +R               
Sbjct: 591  FGTSHGAFGTITPVSNETYLLLKALEVAVSSVVPALGGFEHVTYREVLRAGQERGYSRNA 650

Query: 1034 ------------FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
                        F+  +K   ++    GDLIESFL  S+T    I
Sbjct: 651  SFENANVVSSGVFDKRRKRYLSRCVCSGDLIESFLTFSQTIQQRI 695


>gi|340710064|ref|XP_003393618.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Bombus terrestris]
          Length = 1417

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 232/525 (44%), Gaps = 76/525 (14%)

Query: 627  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 683
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 899  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 958

Query: 684  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 733
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 959  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1018

Query: 734  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 773
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1019 SYYRFNGEDKEFTEEERPERFIYPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1078

Query: 774  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIA 817
             S + +        Y  +GT Y   E+   ++GRIL+F I+E            + + I 
Sbjct: 1079 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1137

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 874
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1138 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1191

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 929
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1192 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1249

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----- 984
            N  LF  +  S  +   +  +L    ++HLG+ VN F      +  P +D          
Sbjct: 1250 NMALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFRIRCRLSDPANDKKHFSGADKR 1307

Query: 985  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV-- 1041
               ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T   
Sbjct: 1308 HVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQGN 1367

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
             A+  +DGDL+  +  L      +++K +   V+E+ + + E+ R
Sbjct: 1368 PARGIIDGDLVWRYFYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1412



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/401 (19%), Positives = 161/401 (40%), Gaps = 78/401 (19%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP--------------- 47
           +++   + H  T V H+    F +  E  L +A    I I  L P               
Sbjct: 1   MYSICKSTHPATGVEHAITCYFFNRSEKCLAVAGANIIRIFRLIPDVDITKKEKYTESRP 60

Query: 48  --QGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG 105
               L+ +    ++G + +++     G  +D L ++    K  V+++D ++ +L T ++ 
Sbjct: 61  PKMKLECLSQYTLHGNVMSMQAVTLVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLH 120

Query: 106 DVSDRIGRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF----------------- 144
              +   R   T++  I I+  DP+ R   + +Y     V+PF                 
Sbjct: 121 YFEEEEIRDGWTNHHHIPIVRVDPEGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKA 180

Query: 145 -DNKGQLKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKT 192
             NK  +  ++ I L+ L+     ++D++FL+G  +PT+++LY+  +        R    
Sbjct: 181 LSNKTPILSSYMIVLKSLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTC 240

Query: 193 YEVALK---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------- 241
             VA+     +      WS +NL       +PV  PL G LI+   +++Y +        
Sbjct: 241 AMVAISLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYGV 300

Query: 242 -----ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKE 287
                A      P++P   +   ++  +GS        R ++   +G L++L +      
Sbjct: 301 SLNSLAETSTNFPLKP---QEGVKISLEGSQVAFISSDRLVISLKSGELYVLSLFADSMR 357

Query: 288 KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            V G   +    + + S +   ++  +++GS  G+S L++ 
Sbjct: 358 SVRGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRF 398



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%)

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 416
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 507 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 566

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 567 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 624

Query: 476 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 625 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTAKLHAQ 674


>gi|53791734|dbj|BAD53405.1| UV-damaged DNA-binding protein-like [Oryza sativa Japonica Group]
          Length = 154

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 7/92 (7%)

Query: 898 EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 957
           +G  +E +RDYN  WM+AVE+LDD +Y+GA+N +NLFTV K          GRL V+G+Y
Sbjct: 62  KGQTDELSRDYNITWMTAVEMLDDYVYIGADNCYNLFTVLK-------RRVGRLLVIGQY 114

Query: 958 HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
           HLG+ VNRF  G LVM+ P S+V QIP  IFG
Sbjct: 115 HLGDLVNRFHQGPLVMQDPGSEVDQIPAFIFG 146



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 24/32 (75%)

Query: 1  MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNL 32
          M  WNYVVTAHK T V  SCVGNFT+P  L+L
Sbjct: 15 MRPWNYVVTAHKLTVVARSCVGNFTAPDHLDL 46


>gi|357611296|gb|EHJ67409.1| putative cleavage and polyadenylation specific factor 1 [Danaus
            plexippus]
          Length = 328

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 41/337 (12%)

Query: 774  CSFSDDSNV--YYCVGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKE 820
            C F   S +  Y  +GT Y   E+   ++GRIL++ + D            + + I  KE
Sbjct: 4    CGFIQLSGLRGYIAIGTNYNYGEDI-TSRGRILIYDIIDVVPEPGQPLTKNRFKEIYAKE 62

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRG 877
             KG V +L    G L++A+ QKI  Y W L+D+   G   + ++   H  +LA+      
Sbjct: 63   QKGPVTALTQVLGFLISAVGQKI--YLWQLKDNDLVGVAFIDTQIYVH-RMLAV-----K 114

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFN 932
            + I+V D+ KSISLL Y+H+   +   +RD     +  ++ + D+  LG     +E NF 
Sbjct: 115  NLILVADVYKSISLLRYQHQHRTLSLVSRDLRTAQIYDMQFMIDNTSLGFLVSESEGNFA 174

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 992
            ++  +  +  +   +R  L    +YHLG+ V+       + RL      Q    +F T++
Sbjct: 175  MYMHQPQARESYGGQR--LIRKCDYHLGQRVH------AMFRLAARGERQTHVTMFTTLD 226

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDG 1049
            G +G +  +  + Y  L  LQ  +      + GLN + +R++   ++ +    A+  LDG
Sbjct: 227  GGVGYVLPVSEKVYRRLLMLQNVINNYCCHLAGLNPKAYRTYKVSRRALCGGAARGVLDG 286

Query: 1050 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
            DL+  +  + RT   +I++ +   VEE+   + E+ R
Sbjct: 287  DLVSLYTSMPRTEQQDIARKIGTKVEEIMSDLYEIDR 323


>gi|431908146|gb|ELK11749.1| Cleavage and polyadenylation specificity factor subunit 1 [Pteropus
            alecto]
          Length = 820

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 194/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 349  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 408

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 409  KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 468

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 469  IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 527

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 528  PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 582

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 583  IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 642

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 643  QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 696

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 697  AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 756

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 757  AFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 802


>gi|218188544|gb|EEC70971.1| hypothetical protein OsI_02599 [Oryza sativa Indica Group]
          Length = 274

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 81/146 (55%), Gaps = 22/146 (15%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIH---------------LL 45
           M  WNYVVTAHK T V  SCVGNFT+P  L+L  +KCTRIEI                LL
Sbjct: 15  MRPWNYVVTAHKLTVVARSCVGNFTAPDHLDL--SKCTRIEIGVSAYSSGSSANNCALLL 72

Query: 46  TPQGLQPMLDVPIYGRIATLELFRPHGEAQ-----DFLFIATERYKFCVLQWDAESSELI 100
                +PMLD P+YGRIAT+ELFRP   A      D    ++ ++    +  + E+  +I
Sbjct: 73  ASIVEKPMLDAPVYGRIATIELFRPCVLASIKFSPDSRAKSSCKFVNAFVYLNQENRYVI 132

Query: 101 TRAMGDVSDRIGRPTDNGQIGIIDPD 126
            R+  D SD IGRPT+ GQ   ++ D
Sbjct: 133 CRSGRDASDHIGRPTNKGQTDELNRD 158



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 78/168 (46%), Gaps = 57/168 (33%)

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 956
             +G  +E  RDYN  WM+AVE+LDD +Y+GA+N +NLFT  K          GRL V+G+
Sbjct: 148  NKGQTDELNRDYNITWMTAVEMLDDYVYIGADNCYNLFTELK-------RRVGRLLVIGQ 200

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
            YHLG                                                 ++LQ  L
Sbjct: 201  YHLG-------------------------------------------------DQLQLVL 211

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVD-AKNFLDGDLIESFLDLSRTRM 1063
               IK VG L H QWR+F  + ++V  A+ F+D DLIESFL L  ++M
Sbjct: 212  ADYIKSVGNLTHAQWRAFYTDGRSVGVAQGFVDNDLIESFLSLEPSKM 259


>gi|402588688|gb|EJW82621.1| splicing factor 3b [Wuchereria bancrofti]
          Length = 601

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 125/575 (21%), Positives = 235/575 (40%), Gaps = 82/575 (14%)

Query: 2   SIWNYVVTAHKPTNVTHSCVGNFTS-PQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
           +++ Y +T    + +  +  G+F   P++  + IA+   +++    P+   +  +     
Sbjct: 30  NMYLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHVLCSHNA 89

Query: 59  YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDN 117
           +G I +L  FR  G ++D++ I ++  +  +L+++A+      R   +   + G R    
Sbjct: 90  FGIIRSLLAFRLTGGSKDYIVIGSDAGRIVILEYNAQKV-CFERVHQETFGKTGCRRIVP 148

Query: 118 GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGC 172
           GQ   +DP  R  LIG      L  ++  D    L  +  +   +   +    +    G 
Sbjct: 149 GQFLAVDPKGRAILIGAVERQKLVYIMNRDASANLTISSPLEAHKSHCICYSVVGVDVGF 208

Query: 173 AKPTIVVLYQDNKDARHVKTYEVALK--------DKDFV----EGPWS----------QN 210
             PT   L  D ++  H  T  +A K        + D V    +GP              
Sbjct: 209 ENPTFACLEVDYEEVDHDPTGHLATKIPQTLTFYELDLVPGGQDGPSGVIVCCENYLVYK 268

Query: 211 NLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLL 270
           NL +  D+  PVP     +       I+ C+A     +                   +L+
Sbjct: 269 NLGDQPDIKCPVPRRRNELDDCDRTVIIVCAATHKTKLMYF----------------FLV 312

Query: 271 GDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL 330
               G +  + +  E + VT LKI+      +++ +  L    ++  S +G+  L ++  
Sbjct: 313 QTDQGDIFKVTLESEHDIVTELKIKYFDTIPVSNAMCILKTGFLFTASEFGNHHLYQIAH 372

Query: 331 QPDAK----------------------GSYV-EVLERYVN-----LGPIVDFCVVD-LER 361
             D                        GS + ++L R++      L      C++D L  
Sbjct: 373 LGDEDDEPEFSSRMQLEEGETFFLLLVGSQIWQLLTRWIAYHRLFLPTFKVHCMIDDLAN 432

Query: 362 QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVS 420
           +   Q+ T  G     +++++RNG+ + E A  EL G    +W+++ + DD FD+ +VVS
Sbjct: 433 EDSPQIYTLVGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKFDSHIVVS 492

Query: 421 FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 480
           F++ T +L++   + +EE    GF   T TL C     + L+QV    +R + +  R   
Sbjct: 493 FVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIRADRRV-- 548

Query: 481 NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 515
           NEWK+P   ++     N  QV +A  GG LVY E+
Sbjct: 549 NEWKAPGKRTIMKCALNRRQVAIALAGGELVYFEL 583


>gi|255918233|ref|NP_001157645.1| cleavage and polyadenylation specificity factor subunit 1 isoform 1
            [Mus musculus]
          Length = 1450

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 199/480 (41%), Gaps = 74/480 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + +    R+   +R+
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDITGSRLTSNSRM 1437



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 117/631 (18%), Positives = 243/631 (38%), Gaps = 169/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----------------NLQPDAKGSY 338
               + + +++  ++   +++GS  G+S L+K                    +P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           VE                                      V +  +N+GP  +  V +  
Sbjct: 424 VEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 359 -LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------ 405
            L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++      
Sbjct: 484 FLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRK 543

Query: 406 ------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                             ++  D     FL++S    T IL      E+ E +  GF +Q
Sbjct: 544 EEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 601

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 GPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1303

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 212/503 (42%), Gaps = 75/503 (14%)

Query: 285 EKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNL--QPDA-------- 334
           +K KV G++I LL      + ++     +++  +S+GD  L +      PDA        
Sbjct: 372 DKTKVVGMEIALLDTLPNVNALNVSKLGMLFAAASFGDHHLYQFERIDLPDAPKNTSDEA 431

Query: 335 ------KGSYV-------EVLERYV--------------NLGPIVDFCVVDLE-RQGQGQ 366
                  GS V       E+  ++V              N  P     V +L   +   Q
Sbjct: 432 TKALTASGSTVLTTALASEIASKFVPTVLQNLRKIHSLDNPSPTTGVLVGELAGNEVSPQ 491

Query: 367 VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG----MWSLRSSTDDPFDTFLVVSFI 422
           +   +G+    +LR+ R+G  + E A  EL G+ G    + +  ++     D F+VVSF 
Sbjct: 492 IYALTGSGPTSALRVTRHGASVTELAVSELPGVPGAIFTIGTGNTAGGKKLDQFIVVSFA 551

Query: 423 SETRILAMNLEDELEETEIE-GFCSQTQTLFCHD-AIYNQLVQVTSGSVRLVSSTSRELR 480
             T +L++   + +EE   E GF + + TL C        L QV    VR + +   +  
Sbjct: 552 DATLVLSVG--ETVEEVGKESGFLTNSPTLACSALGSDGALCQVHPVGVRHIQNGQAK-- 607

Query: 481 NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILTEVKHAQLEYEISCLDIN 538
            +W  P    +  A+AN SQV++A  GG ++Y E+    G L E    ++  ++ CLD+ 
Sbjct: 608 -QWHCPGLKRIECASANESQVIVALAGGEIIYFELDPMSGNLMESATREMGADVCCLDVG 666

Query: 539 PIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII--PRSVLLCAFE-GIS 594
            I +  S S  A VG   D +VR+ SL PD   I  +     +   P SV L     G++
Sbjct: 667 TIPKGRSRSLFAVVG-CRDQTVRVISLEPDKTKILSQRSSTALKARPHSVALQMMNAGVA 725

Query: 595 ---------YLLCALGDGHLLNFLLNMKTGEL-TDRKKVSLGTQPITLRTFSSKNTTHVF 644
                     L+  L DG  L   ++  TG + T   +  LG +P+ +   S ++     
Sbjct: 726 NSNANVDDLTLIIGLDDGSSLRASIDPITGSIGTSPTRRFLGARPVAVSRISLESNPATL 785

Query: 645 AASDRPTVIY--SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID--- 699
             S RP +    +++ K + + ++   + H C F+S A  + +       L I +I+   
Sbjct: 786 LLSSRPWITRRDAASGKHIMAPLSYAPLDHGCSFSSDAVSEGIVATAGKTLRILSIESSG 845

Query: 700 ----DIQKLHIRSIPLGEHPRRI 718
               D +  +   IPL   PR++
Sbjct: 846 MEGGDDEAFNTNKIPLRYTPRQM 868



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 42/303 (13%)

Query: 803  ILVFIVEDGKLQLIAEKETK-GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--Q 859
            ++  IV   + QL+       G V SL  F G+LL  I   ++LY+      G R+L  +
Sbjct: 1015 VIYRIVNGDRFQLLHRTSVDDGPVLSLAHFQGRLLVGIGTTLRLYEM-----GKRQLLRK 1069

Query: 860  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
            SE  +    +   VQT G+   +GD+M+SI ++ Y      +   A D +   +   E+L
Sbjct: 1070 SELRNFPTFVK-TVQTVGERAYIGDMMQSIQIVRYDVSANRLVLIANDASPRPIVCQELL 1128

Query: 920  D-DDIYLGAENNFNLFTVRKNSEGAT-------------DEER----GRLEVVGEYHLGE 961
            D + + +G  + F   +V +   GA              D  R     +LE++ +Y++GE
Sbjct: 1129 DWNTVAVG--DKFGNISVMRLPRGADTSAIDVTGQRALWDSSREDMIPKLELLCQYYVGE 1186

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVI 1020
             V      SLV        G   ++I+ TV+G IG      +   + F  +L++ LR   
Sbjct: 1187 VVTSMTRSSLV-------AGGAESLIYVTVSGRIGAFVPFTNRNDVDFYSQLESELRGDA 1239

Query: 1021 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 1080
                G + + +RS+      V     +DGDL ++F  L   + ++I++ ++ +V E+ K+
Sbjct: 1240 SRPTGRDPQSYRSYYAPMMHV-----VDGDLCDAFNSLGPEKQNKIAEKLDRTVGEIMKK 1294

Query: 1081 VEE 1083
            +E+
Sbjct: 1295 LED 1297


>gi|417406474|gb|JAA49895.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
            cft1 cpsf subunit [Desmodus rotundus]
          Length = 1444

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 194/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 973  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1032

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1033 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1092

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1151

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1206

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ +   +   +RD     + +V+ + D+ 
Sbjct: 1207 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEDSKTLSLVSRDAKPLEVYSVDFMVDNA 1266

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1267 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1320

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1321 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1380

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1381 AFRMLHVDRRTLQNAVRNILDGELLNRYLYLSTMERSELAKKIGTT 1426



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 75/395 (18%), Positives = 163/395 (41%), Gaps = 81/395 (20%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQP----------------- 52
           AH PT +  S   NF +  E NL++A  +++ ++ L      P                 
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEAPTKNDRSTEGKAHREHRE 67

Query: 53  ----MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM---- 104
               +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    
Sbjct: 68  KLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFE 127

Query: 105 -GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA--- 153
             ++ D   +     ++ + DPD R   + +Y     V+PF       +++G + E    
Sbjct: 128 EPELRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRS 186

Query: 154 -------FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALK 198
                   ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +   
Sbjct: 187 SFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 246

Query: 199 DKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS------------- 241
             +  +      WS  +L       + VP P+ GV+I    +++Y +             
Sbjct: 247 SLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSL 306

Query: 242 ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGL 292
            +   A P+R   T+   R   D +        + ++    G +++L +IT     V   
Sbjct: 307 TSGTTAFPLR---TQEGVRTTLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRSF 363

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
             +    + + S++  ++   +++GS  G+S L+K
Sbjct: 364 HFDKAAASVLTSSMVTMEPGYLFLGSRLGNSLLLK 398


>gi|402879380|ref|XP_003903320.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Papio anubis]
          Length = 1389

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 918  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 977

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 978  KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1037

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1038 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1096

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1097 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1151

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1152 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1211

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1212 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1271

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1272 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1331

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1332 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1371



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 411 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 470

Query: 391 QASVELQGIKGMWSL-----RSSTDDP-------------------FDTFLVVSFISETR 426
             + EL G   MW++     +   D+P                      FL++S    T 
Sbjct: 471 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEARSPEADDDGRRHGFLILSREDSTM 530

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 531 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 580


>gi|355698297|gb|EHH28845.1| Cleavage and polyadenylation specificity factor 160 kDa subunit
            [Macaca mulatta]
          Length = 1436

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 965  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1024

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1025 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1084

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1085 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1143

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1144 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1198

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1199 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1258

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1259 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1318

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1319 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1378

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1379 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1418



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/392 (18%), Positives = 165/392 (42%), Gaps = 78/392 (19%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEG--P--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +   P  WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
               + + +++  ++   +++GS  G+S L+K
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK 395


>gi|119602512|gb|EAW82106.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
            [Homo sapiens]
 gi|119602513|gb|EAW82107.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
            [Homo sapiens]
 gi|119602514|gb|EAW82108.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
            [Homo sapiens]
          Length = 1365

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 894  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 953

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 954  KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1013

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1014 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1072

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1073 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1127

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1128 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1187

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1188 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1247

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1248 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1307

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1308 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1347



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 105/553 (18%), Positives = 213/553 (38%), Gaps = 153/553 (27%)

Query: 72  GEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GDVSDRIGRPTDNGQIGIIDPD 126
           G  +D L ++ +  K  V+++D  + +L T ++      ++ D   +     ++ + DPD
Sbjct: 10  GAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRV-DPD 68

Query: 127 CRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FNIR-LEE--LQVLDI 166
            R   + +Y     V+PF       +++G + E            ++R L+E  L ++D+
Sbjct: 69  GRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDL 128

Query: 167 KFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEGP----WSQNNLDNGAD 217
           +FL+G  +PT+++L++ N+      A    T  +     +  +      WS  +L     
Sbjct: 129 QFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCT 188

Query: 218 LLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPIRPSITKAYGRVDAD 264
             + VP P+ GV++    +++Y +                  A P+R   T+   R+  D
Sbjct: 189 QALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLR---TQEGVRITLD 245

Query: 265 GS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
            +        + ++    G +++L +IT     V     +    + + +++  ++   ++
Sbjct: 246 CAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLF 305

Query: 316 IGSSYGDSQLI----KLNLQP--------------------DAKGSY------------- 338
           +GS  G+S L+    KL   P                    DA   +             
Sbjct: 306 LGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVD 365

Query: 339 -------------------VEVLERYVNLGPIVDFCVVD---LERQGQG------QVVTC 370
                               EV +  +N+GP  +  V +   L  + Q       ++V C
Sbjct: 366 EIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVC 425

Query: 371 SGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-----RSSTDDP------------- 412
           SG  K+G+L +++  I      + EL G   MW++     +   D+P             
Sbjct: 426 SGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTP 485

Query: 413 -------FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQV 464
                     FL++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQV
Sbjct: 486 EADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQV 543

Query: 465 TSGSVRLVSSTSR 477
           +   +RL+   ++
Sbjct: 544 SPLGIRLLEGVNQ 556


>gi|397497327|ref|XP_003819464.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Pan paniscus]
 gi|410336497|gb|JAA37195.1| cleavage and polyadenylation specific factor 1, 160kDa [Pan
            troglodytes]
          Length = 1442

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 971  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1030

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1031 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1090

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1091 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1149

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1150 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1204

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1205 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1264

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1265 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1324

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1325 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1384

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1385 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1424



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 118/632 (18%), Positives = 243/632 (38%), Gaps = 170/632 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLI----KLNLQP------------------- 332
               + + +++  ++   +++GS  G+S L+    KL   P                   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKR 423

Query: 333 -DAKGSY--------------------------------VEVLERYVNLGPIVDFCVVD- 358
            DA   +                                 EV +  +N+GP  +  + + 
Sbjct: 424 VDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAMGEP 483

Query: 359 --LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL----- 405
             L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++     
Sbjct: 484 AFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVR 543

Query: 406 RSSTDDP-------------------FDTFLVVSFISETRILAMNLEDELEETEIEGFCS 446
           +   D+P                      FL++S    T IL      E+ E +  GF +
Sbjct: 544 KEEEDNPKGEGTEQEPSTPEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFAT 601

Query: 447 QTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 QGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 633


>gi|410042329|ref|XP_003954555.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Pan troglodytes]
          Length = 1296

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 825  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 884

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 885  KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 944

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 945  IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1003

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1004 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1058

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1059 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1118

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1119 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1178

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1179 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1238

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1239 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1278



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/392 (18%), Positives = 164/392 (41%), Gaps = 78/392 (19%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
               + + +++  ++   +++GS  G+S L+K
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK 395


>gi|395512730|ref|XP_003760588.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Sarcophilus harrisii]
          Length = 1449

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 200/480 (41%), Gaps = 74/480 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 978  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1037

Query: 725  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFI--ST 759
            + +A+ +  N  C        EE E   +                +L+   ++E I  + 
Sbjct: 1038 KVYAVATSTNALCTRIPRMTGEEKEFETIERDDRYIHPLQEAFSIQLISPVSWEAIPNAR 1097

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1098 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1156

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1157 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1211

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D  
Sbjct: 1212 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDSA 1271

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1272 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1325

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + PT             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1326 AEGPTKKSIVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1385

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1386 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLEIDRV 1445



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 124/285 (43%), Gaps = 56/285 (19%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT---------------------PQ 48
           AH PT +  S   NF S  E NL++A  +++ ++ L                       +
Sbjct: 8   AHPPTGLEFSMYCNFFSNAERNLVVAGTSQLYVYRLNHDAETSTKSDRNAEGKLHKEHKE 67

Query: 49  GLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM---- 104
            L+ +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    
Sbjct: 68  KLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFE 127

Query: 105 -GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA--- 153
             ++ D   +     ++ + DPD R   + +Y     V+PF       +++G + E    
Sbjct: 128 EPELRDGFVQNVHTPRVRV-DPDGRCAVMLIYGTRLVVLPFRRESLAEEHEGLVGEGQKS 186

Query: 154 -------FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALK 198
                   ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +   
Sbjct: 187 SFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 246

Query: 199 DKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
             + ++      WS  NL       + VP P+ GV+I    +++Y
Sbjct: 247 SLNILQKVHPVIWSLTNLPFDCTQALAVPKPIGGVVIFAVNSLLY 291


>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
            putative [Candida dubliniensis CD36]
 gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
          Length = 1187

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 158/754 (20%), Positives = 308/754 (40%), Gaps = 97/754 (12%)

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +++ + S +   D +LV+S    ++ L +++ + +E+ E   F     T+         +
Sbjct: 454  IFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQSTISVQQVGIASV 513

Query: 462  VQVTSGSVRLVSSTS-RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG---D 517
            VQV S  ++ + + + ++   +W  P G ++  A+ N  QVL+A    ++VY EI    D
Sbjct: 514  VQVYSNGIKHIRTVNGKKKTTDWFPPAGITITHASTNNQQVLIALSNLNVVYFEIDSTDD 573

Query: 518  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL- 576
             ++    H ++   I+ + I     N   S  A +G  +D ++++ SL + N +  + L 
Sbjct: 574  QLIEYQDHLEISTTITAMAIQE--HNSEKSSFAIIGC-SDETIQVVSLQEDNCLEIKSLQ 630

Query: 577  ---GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
                     + +     E  +++   + +G      ++   G L++ +   LG++P+ L 
Sbjct: 631  ALSANSSSLKMLKSSGKE--THVHIGMENGVYARIKIDTINGNLSNSRVKYLGSKPVNLS 688

Query: 634  TFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP-DSLAIAKEG 691
                 N    V A S  P + Y        + +   ++++   F S     + +   K+ 
Sbjct: 689  VIKFSNEIEGVLAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDN 748

Query: 692  ELTIGTI-------DDIQKLHIRSIPLGEHPRR-ICHQEQSRTFAI-----------CSL 732
             L I ++       D  Q L I +  L   PR+ I H +  R F             C++
Sbjct: 749  NLVIFSVGKEDSVFDPSQDLTITNTKLRYTPRKMITHGD--RLFISESEYNVQGPFKCNI 806

Query: 733  KNQSCAEESEMHF---------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 777
                     E ++               ++++DD+T + I +   +  E   S+   +F+
Sbjct: 807  NGNVKENVDEDYYEAFGYDRKQDSWASCIQVVDDKTNQVIQSLQFEENESIVSMSDVAFN 866

Query: 778  DD-SNVY---YCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 830
               S+V+     VG      +LP   E  K  +  F +    LQL+ + E       L  
Sbjct: 867  KSLSSVHASHLVVGVCTNQTILPNSYE--KSYLYTFKIGKKHLQLVHKTELDYIPQVLEN 924

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVGDLMK 887
            F  KLL A N  IQLY     D G ++L  +          +   +      I+      
Sbjct: 925  FQDKLLVASNNHIQLY-----DIGQKQLLKKSTTIIDFSQNINKIIPQSNRIIICDSHKS 979

Query: 888  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---------- 937
            SI    +   +      A D     ++++  LD D  +G +   N+F  R          
Sbjct: 980  SIIFAKFDDSQNQFVPFADDIMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQAD 1039

Query: 938  ------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 991
                  K+ EG  +    +L+ + E+H+G+ +     G L       ++    +VI+  +
Sbjct: 1040 DDWTILKSQEGILNSCPYKLQNLIEFHIGDIITSLNLGCL-------NLAGTESVIYTGL 1092

Query: 992  NGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 1050
             G IG++  L  +  +  L  LQ  +++    + G +H ++RS+ N       KN +DGD
Sbjct: 1093 QGTIGLLVPLVSKSEVELLFNLQLLMQQFQNNLVGKDHLKFRSYYNP-----IKNVIDGD 1147

Query: 1051 LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            L+E FL+   +   EIS+ +N SV ++ K++ +L
Sbjct: 1148 LLERFLEFDTSLRIEISRKLNKSVNDIEKKLIDL 1181


>gi|426361048|ref|XP_004047737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Gorilla gorilla gorilla]
          Length = 1440

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 969  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1028

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1029 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1088

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1089 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1147

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1148 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1202

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1203 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1262

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1263 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1322

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1323 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1382

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1383 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1422



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 116/630 (18%), Positives = 242/630 (38%), Gaps = 168/630 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD     + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGTCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLI----KLNLQP------------------- 332
               + + +++  ++   +++GS  G+S L+    KL   P                   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKR 423

Query: 333 -DAKGSYV------------------------------EVLERYVNLGPIVDFCVVD--- 358
            DA   +                               +V +  +N+GP  +  + +   
Sbjct: 424 VDATAGWSGEGRSRAGQERGQVTQGWSGAGAPLTVAVPQVCDSILNIGPCANAAMGEPAF 483

Query: 359 LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-----RS 407
           L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++     + 
Sbjct: 484 LSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKE 543

Query: 408 STDDP-------------------FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 448
             D+P                      FL++S    T IL      E+ E +  GF +Q 
Sbjct: 544 EEDNPKGEGTEQEPSTPEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQG 601

Query: 449 QTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
            T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 PTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 631


>gi|156364999|ref|XP_001626630.1| predicted protein [Nematostella vectensis]
 gi|156213514|gb|EDO34530.1| predicted protein [Nematostella vectensis]
          Length = 1420

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 227/531 (42%), Gaps = 81/531 (15%)

Query: 622  KVSLGTQPITLRTFSSKNT-THVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNS 678
            K  L  +   LR F+  ++ + +F     P  I+ +N+   + +    +  V+    F++
Sbjct: 900  KSGLDPKVAMLRVFNDISSYSGIFVCGSYPFWIFVTNRGAFHWHPMSIDGPVTCFAAFHN 959

Query: 679  AAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLK 733
               P   L     GEL I  +           +R +PL   P  + +  +S+T+AI + +
Sbjct: 960  VNCPKGFLYFNTRGELRISVLPTHLSYDSPWPVRKVPLRYTPHMVSYNRESKTYAIVTSE 1019

Query: 734  NQSC-------AEESEMHFVRLLDDQTFEFIST--------------------YPLDTFE 766
             + C       AE+ E  FV  + D  F + ST                    + LD +E
Sbjct: 1020 QEPCKKIPRVTAEDKE--FVDTIRDARFIYPSTERFVLQLISPISWEVIPNTRHDLDEWE 1077

Query: 767  YGCSILSCSF-SDDSNV----YYCVGTAYVLPEENEPTKGRILVF-IVE----------D 810
            +  ++ +    S++++     + CVGT  +  EE    +GRIL+F I+E           
Sbjct: 1078 HVTTMKNLLLHSEETHTGRKGFICVGTTQLYGEEIA-VRGRILIFDIIEVVPEPGQPLTK 1136

Query: 811  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGH 867
             K +L+ EKE KG V +LN  NG L++ I QKI  Y W   D+   G   + ++   H  
Sbjct: 1137 NKFKLLYEKEQKGPVTALNQVNGYLVSGIGQKI--YIWNFTDNDLVGMAFIDTQLYIHSL 1194

Query: 868  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG- 926
            +      T  +F++  D+ KSI+LL  + E   +   ++D     + A +   D   +G 
Sbjct: 1195 V------TIRNFVIAADVCKSITLLRLQEETKTLAFVSKDPKNLEVYAADFFIDGPQIGF 1248

Query: 927  ----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS---- 978
                 E N  LFT +   E    +   RL    + ++G  +  F   +    L  S    
Sbjct: 1249 LVSDVEKNLVLFTYQ--PEAIESQGGQRLLQRADINVGTHITSFFRIAAKAHLKASGEKS 1306

Query: 979  -DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 1037
             ++ Q+    FGT++G +G++  +  + +  L  LQT L   I  V GLN + +R     
Sbjct: 1307 KEMRQL--TCFGTLDGALGLMLPMTEKTFRRLHMLQTKLVDCIPHVAGLNPKAFRMLQWR 1364

Query: 1038 KKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
            K+ +    +N LD  L+  ++ LS     E+++ +  +  ++   + ++ R
Sbjct: 1365 KRKLCNPHRNVLDWQLLFKYMHLSFMERQEVARKIGTTPAQIMDDMMDIER 1415



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 125/633 (19%), Positives = 241/633 (38%), Gaps = 179/633 (28%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ------------GLQPMLDV- 56
            H PT V      +F S +E NL++A  T + +  L  Q             L+  L++ 
Sbjct: 8   THPPTGVEFCVNCHFYSARESNLVVAGTTEVRVFRLCYQQEGSSSAESGGSSLKRKLELV 67

Query: 57  ---PIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGR 113
               ++G I +L   R  G  +D L ++ +  K  ++ +D    ++ TR++    D   +
Sbjct: 68  GQHSLFGNIESLHAIRLAGNTRDSLLMSFKDAKLSIVDYDPGKHDIKTRSLHFFEDEKIK 127

Query: 114 ----PTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKE----------------- 152
                 D   +  IDP+ R   +  Y     V+PF  +G + +                 
Sbjct: 128 SHCLAQDRAPVVRIDPERRCAVMLAYGTHLVVLPFRQEGGIDDTAQDSIISSSDRPPVLP 187

Query: 153 AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD------------ARHVKTYEV 195
           ++ I ++E+      +LDI+FL+G  +PT+++LY+  K             A    +  +
Sbjct: 188 SYIIDVKEIDEKTCNILDIQFLHGYYEPTLLILYEPLKTWAGRLAMRNDTCALVAVSLNM 247

Query: 196 ALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY---------CSANAF- 245
           + K    V   W  + L      ++PVP P+ GVL+     ++Y          S N+  
Sbjct: 248 SQKAHPVV---WQLSCLPFDCIYVMPVPKPIGGVLVCCMNALLYLNQSVPPYGVSVNSIG 304

Query: 246 ---KAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLL------VITHEKEKVTGLKIEL 296
                 P++P   +    +  +GS  +   +  L+  L      V+T   + V  ++  +
Sbjct: 305 ENSTVFPLKP---QKGVTITLEGSNAIFIANDKLVFSLKGGEIYVVTLIADGVRSVRNFV 361

Query: 297 LGETS---IASTISYLDNAVVYIGSSYGDSQLIKLNLQP---------DAKGSYVEVLER 344
             +T+   + S +    +  +++GS  G+S L+K   +P         +A+    + +ER
Sbjct: 362 FDKTAASVLTSCVCECGDGYLFLGSRLGNSLLVKYTEKPQDIVYGTENNAQSMQCDNIER 421

Query: 345 Y-----------------------------------------VNLGP------------- 350
           +                                         +N+GP             
Sbjct: 422 WQILNGSLLLIVDDLDELEVYGAQQEAGVELTSYTFEVCDSLLNIGPCSCMDIGEPAFLS 481

Query: 351 ----IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 406
                 D   +DLE      VV+CSG  K+G+L +++  I      + EL G   MW++ 
Sbjct: 482 VSSYFADAQELDLE------VVSCSGYGKNGALTVLQRSIRPQVVTTFELPGCTDMWTVF 535

Query: 407 SST---------------------DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFC 445
           S                       ++ + +FL++S   E   + +  E E+ E +  GF 
Sbjct: 536 SKDQKKGAQTNAIHRYPSQPCTQGNEKYHSFLILS--REDSSMILKTEQEIMEVDQSGFS 593

Query: 446 SQTQTLFCHD-AIYNQLVQVTSGSVRLVSSTSR 477
           +Q  T++  +    + ++QVT   VRL+   ++
Sbjct: 594 TQCATIYAGNFGNGSYILQVTPLGVRLLEGVNQ 626


>gi|197245729|gb|AAI68713.1| Cpsf1 protein [Rattus norvegicus]
          Length = 1439

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 968  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1027

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1028 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1087

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1088 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1146

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1147 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1201

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1202 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1261

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1262 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1315

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1316 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1375

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1376 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1421



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 117/629 (18%), Positives = 243/629 (38%), Gaps = 167/629 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----------------NLQPDAKGSY 338
               + + +++  ++   +++GS  G+S L+K                    +P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 V------------------------------------EVLERYVNLGPIVDFCVVD---L 359
           V                                    EV +  +N+GP  +  V +   L
Sbjct: 424 VDPTVGWTGGKTQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPAFL 483

Query: 360 ERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------- 405
             + Q       ++V CSG  K+G+L +++  I      + EL G   MW++        
Sbjct: 484 SEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEE 543

Query: 406 ----------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 449
                           ++  D     FL++S    T IL      E+ E +  GF +Q  
Sbjct: 544 EETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGP 601

Query: 450 TLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 TVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 630


>gi|56676371|ref|NP_037423.2| cleavage and polyadenylation specificity factor subunit 1 [Homo
            sapiens]
 gi|23503048|sp|Q10570.2|CPSF1_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit
 gi|16878041|gb|AAH17232.1| Cleavage and polyadenylation specific factor 1, 160kDa [Homo sapiens]
 gi|119602516|gb|EAW82110.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_c
            [Homo sapiens]
 gi|123993607|gb|ABM84405.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
            construct]
 gi|123999626|gb|ABM87355.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
            construct]
 gi|307684758|dbj|BAJ20419.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
            construct]
          Length = 1443

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 972  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1031

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1032 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1091

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1092 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1150

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1151 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1205

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1206 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1265

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1266 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1325

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1326 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1385

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1386 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1425



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 119/633 (18%), Positives = 243/633 (38%), Gaps = 171/633 (27%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLI----KLNLQP------------------- 332
               + + +++  ++   +++GS  G+S L+    KL   P                   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKR 423

Query: 333 -DAKGSY--------------------------------VEVLERYVNLGPIVDFCVVD- 358
            DA   +                                 EV +  +N+GP  +  V + 
Sbjct: 424 VDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEP 483

Query: 359 --LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL----- 405
             L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++     
Sbjct: 484 AFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVR 543

Query: 406 RSSTDDP--------------------FDTFLVVSFISETRILAMNLEDELEETEIEGFC 445
           +   D+P                       FL++S    T IL      E+ E +  GF 
Sbjct: 544 KEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFA 601

Query: 446 SQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 TQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 634


>gi|392306997|ref|NP_001254722.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
 gi|380812168|gb|AFE77959.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
 gi|383417835|gb|AFH32131.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
          Length = 1442

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 971  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1030

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1031 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1090

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1091 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1149

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1150 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1204

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1205 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1264

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1265 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1324

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1325 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1384

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1385 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1424



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 118/632 (18%), Positives = 244/632 (38%), Gaps = 170/632 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLI----KLNLQP------------------- 332
               + + +++  ++   +++GS  G+S L+    KL   P                   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKR 423

Query: 333 -DAKGSY--------------------------------VEVLERYVNLGPIVDFCVVD- 358
            DA  S+                                 EV +  +N+GP  +  + + 
Sbjct: 424 VDATASWSAGGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAMGEP 483

Query: 359 --LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL----- 405
             L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++     
Sbjct: 484 AFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVR 543

Query: 406 RSSTDDP-------------------FDTFLVVSFISETRILAMNLEDELEETEIEGFCS 446
           +   D+P                      FL++S    T IL      E+ E +  GF +
Sbjct: 544 KEEEDNPKGEGTEQEARSPEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFAT 601

Query: 447 QTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 QGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 633


>gi|355680843|gb|AER96659.1| cleavage and polyadenylation specific factor 1, 160kDa [Mustela
            putorius furo]
          Length = 1399

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 929  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 988

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 989  KVYAVATSTNMPCTRIPRMTGEEKEFEAIERDDRYVHPQQEAFSIQLISPVSWEAIPNAR 1048

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1049 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1107

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1108 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1162

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1163 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1222

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1223 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1276

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1277 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1336

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1337 AFRLLHADRRALQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1382



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 110/570 (19%), Positives = 218/570 (38%), Gaps = 158/570 (27%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GDVSDRIG 112
            +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      ++ D   
Sbjct: 30  FFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFV 89

Query: 113 RPTDNGQIGIIDPDCR----LIGLHLYDGLFKVIPF-------DNKGQLKEA-------- 153
           +     ++ + DPD R    L  + +Y     V+PF       +++G + E         
Sbjct: 90  QNVHAPRVRV-DPDGRCAAMLTAMLIYGSRLVVLPFRRESLAEEHEGLMGEGQRSSFLPS 148

Query: 154 --FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYEVALK---D 199
              ++R L+E  L ++D++FL+G  +PT+++L++ N+        R      VA+     
Sbjct: 149 YIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCCIVAISLNIT 208

Query: 200 KDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFK 246
           +      WS  +L       + VP P+ GV++    +++Y +                  
Sbjct: 209 QKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNGLTTGTT 268

Query: 247 AIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELL 297
           A P+R   T+   R+  D +        + ++    G +++L +IT     V     +  
Sbjct: 269 AFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKA 325

Query: 298 GETSIASTISYLDNAVVYIGSSYGDSQLIKL--NLQ--------------PDAKGSYV-- 339
             + + +++  ++   +++GS  G+S L+K    LQ              P +K   V  
Sbjct: 326 AASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEAPAGAVRETDKDEPPSKKKRVES 385

Query: 340 ------------------------------------EVLERYVNLGPIVDFCVVD---LE 360
                                               EV +  +N+GP  +  + +   L 
Sbjct: 386 AVGWSGGKSAPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAMGEPAFLS 445

Query: 361 RQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWS---------- 404
            + Q       ++V CSG  K+G+L +++  I      + EL G   MW+          
Sbjct: 446 EEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPARKEQE 505

Query: 405 --------------LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 450
                         L +  D     FL++S    T IL      E+ E +  GF +Q  T
Sbjct: 506 ETPKGDGAEQEPSALEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPT 563

Query: 451 LFC---HDAIYNQLVQVTSGSVRLVSSTSR 477
           +F     D  Y  +VQV+   +RL+   S+
Sbjct: 564 VFAGNIGDGRY--IVQVSPLGIRLLEGVSQ 591


>gi|354491126|ref|XP_003507707.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 3 [Cricetulus griseus]
          Length = 1449

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1423



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 116/631 (18%), Positives = 243/631 (38%), Gaps = 169/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEESE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----------------NLQPDAKGSY 338
               + + +++  ++   +++GS  G+S L+K                    +P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           V+                                      V +  +N+GP  +  V +  
Sbjct: 424 VDPTAGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 359 -LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------ 405
            L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++      
Sbjct: 484 FLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRK 543

Query: 406 ------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                             ++  D     FL++S    T IL      E+ E +  GF +Q
Sbjct: 544 EEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 601

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 GPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|348512553|ref|XP_003443807.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Oreochromis niloticus]
          Length = 1456

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 208/480 (43%), Gaps = 74/480 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 985  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1044

Query: 725  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFISTYP 761
            + +A+C+   + C        EE E   +                +L+   ++E I    
Sbjct: 1045 KVYAVCTSVKEPCTRIPRMTGEEKEYEVIERDERYIHPQQEKFSIQLISPVSWEAIPNTR 1104

Query: 762  LD--TFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
            +D   +E+   + + +      V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1105 IDLEEWEHVTCMKTVALRSQETVSGLKGYIAAGTCLMQGEEVT-CRGRILILDVIEVVPE 1163

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W+L+D+   +L     
Sbjct: 1164 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WVLKDN---DLTGMAF 1218

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  DLMKSISLL Y+ E   +   +RD     + ++E + D+ 
Sbjct: 1219 IDTQLYIHQMFSIKNFILAADLMKSISLLRYQEESKTLSLVSRDAKPLEVYSIEFMVDNN 1278

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP---- 976
             LG   ++ + NL+      E        RL    +++ G  +N F       R+P    
Sbjct: 1279 QLGFLVSDRDKNLYVYMYLPEAKESFGGMRLLRRADFNAGANINTF------WRMPCRGA 1332

Query: 977  -DSDVGQIPT------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             D+   +  T        F T++G IG++  +  + Y  L  LQ  L  ++    GLN +
Sbjct: 1333 LDASSKKALTWDNKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPK 1392

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +R  +++++++    KN LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1393 AFRMLHSDRRSLQNPVKNILDGELLNKYLYLSMMERSELAKKIGTTQDIILDDLLEIDRV 1452



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/389 (19%), Positives = 163/389 (41%), Gaps = 72/389 (18%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT------------------PQGLQ 51
           AH PT+V  S   NF S +E NL++A  +++ ++ +                    + L+
Sbjct: 8   AHTPTSVEFSVYCNFISSKEKNLVVAGTSQLFVYRIIHDVESTSKADKSSDSKSRKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G I ++   +  G ++D L ++ +  K  V+++D  + +L T ++    +  
Sbjct: 68  QVASFSLFGNIMSMASVQLVGASRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 112 GRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPFDN---------------KGQLKE 152
            R     N  I ++  DP+ R   + +Y     V+PF                 K     
Sbjct: 128 LRDGFVQNVHIPVVRVDPENRCAVMLVYGTKLVVLPFRKDTLTDEQESGVGEGPKSSFLP 187

Query: 153 AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDF 202
           ++ I + EL      ++D+KFL+G  +PT+++L++ N+      A    T  +     + 
Sbjct: 188 SYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNI 247

Query: 203 VEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAF 245
           ++      WS +NL      ++ VP P+ GV++    +++Y +              N  
Sbjct: 248 MQKVHPVIWSLSNLPFDCTQVMAVPKPIGGVVVFAVNSLLYLNQSVPPYGVSLNSQTNGT 307

Query: 246 KAIPIRPSITKAYGRVDADGSRYLLGD------HAGLLHLL-VITHEKEKVTGLKIELLG 298
            A P+R    +    +D   S ++  D        G +++L +IT     V     +   
Sbjct: 308 TAFPLRVQ-DEVKLTLDCCQSDFIAYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAA 366

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            + + + +  ++   +++GS  G+S L+K
Sbjct: 367 ASVLTTCMVTMEPGYLFLGSRLGNSLLLK 395


>gi|16751835|ref|NP_444423.1| cleavage and polyadenylation specificity factor subunit 1 isoform 2
            [Mus musculus]
 gi|17374611|sp|Q9EPU4.1|CPSF1_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit
 gi|11762096|gb|AAG40326.1|AF322193_1 cleavage and polyadenylation specificity factor 1 [Mus musculus]
 gi|38614159|gb|AAH56388.1| Cleavage and polyadenylation specific factor 1 [Mus musculus]
          Length = 1441

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1423



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 117/631 (18%), Positives = 243/631 (38%), Gaps = 169/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----------------NLQPDAKGSY 338
               + + +++  ++   +++GS  G+S L+K                    +P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           VE                                      V +  +N+GP  +  V +  
Sbjct: 424 VEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 359 -LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------ 405
            L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++      
Sbjct: 484 FLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRK 543

Query: 406 ------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                             ++  D     FL++S    T IL      E+ E +  GF +Q
Sbjct: 544 EEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 601

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 GPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|354491122|ref|XP_003507705.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 1 [Cricetulus griseus]
          Length = 1441

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1423



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 116/631 (18%), Positives = 243/631 (38%), Gaps = 169/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEESE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----------------NLQPDAKGSY 338
               + + +++  ++   +++GS  G+S L+K                    +P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           V+                                      V +  +N+GP  +  V +  
Sbjct: 424 VDPTAGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 359 -LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------ 405
            L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++      
Sbjct: 484 FLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRK 543

Query: 406 ------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                             ++  D     FL++S    T IL      E+ E +  GF +Q
Sbjct: 544 EEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 601

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 GPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|342181720|emb|CCC91200.1| putative damage-specific DNA binding protein [Trypanosoma congolense
            IL3000]
          Length = 1274

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 257/1254 (20%), Positives = 467/1254 (37%), Gaps = 226/1254 (18%)

Query: 7    VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
            V T+  PT V  +  G F   +E  +++ +   I ++  + Q L+ ++D  ++  +  +E
Sbjct: 5    VCTSKHPTAVNGAVSGYFFGNKERIVLLNRLNIISLYSESDQSLKHLVDFHLFASLRFVE 64

Query: 67   ---LFRPHGEAQDFLFIATERYKFCVLQW---DAESSELITRAMGDV------------- 107
               L  P G  +  +F+ + + +  ++ +   D+   ++IT   GDV             
Sbjct: 65   SIPLCDPRGPERHVVFLLSVKQEVSIVAFERLDSGKIDMITLYHGDVETHFHQGRVNDAT 124

Query: 108  ---SDRIGRPTDN-----------------GQIGIIDPDCR--------LIGLHLYDGLF 139
               S   G P+ +                   +G I  D R        L  L   D + 
Sbjct: 125  WCCSGVYGTPSGSLLPVVLFSLYRGGCIAFDPVGAIAADSRASKGAGSALAKLFQEDYIQ 184

Query: 140  KVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGC---AKPTIVVLYQDNKDARHVKTYEVA 196
             V     +  +    N    EL V  +  ++     + P ++VLY D+    HV  Y   
Sbjct: 185  SVFKKAKRRPIFSHANFAASELDVRSVALVHRSGVDSAPFLLVLYADSSSKTHVSEYTTY 244

Query: 197  LKDKD-------FVEGPWSQN--NLDNGAD-------LLIPVPPPLC-------GVLIIG 233
                D            W  +  NL   AD       LL  V P  C       G  +IG
Sbjct: 245  FGKNDEQRHTEKATNRSWIPDAINLLPAADMIQRKGLLLTNVEPNACLLHAVPDGFFVIG 304

Query: 234  EETIVYCSANAFKAIPIRPSITKAYGRVDAD---------------GSRYLLGDHAGLLH 278
             + I + S   +K    +P+ +K    VD                     L+    G   
Sbjct: 305  PQLITFSS---WKVSTTQPASSKNVTTVDVPHFGAYVEPVCCTALPSQELLILFEDGSCV 361

Query: 279  LLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSY 338
             + + ++ + +   K  L+   S A  +  +   V  +G     +  +   L    + S 
Sbjct: 362  KVTVKNDGDGLHSGKYTLV--LSPAVRLQTIPKCVALVGDFCVVASHLANTLWARWRTSE 419

Query: 339  VEVLERYVNLGPIVDFCV-VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-EL 396
              VL    N GP+ D  V +D  R G   V   +G   +G L  VR  + ++    + + 
Sbjct: 420  SGVL--VSNCGPVFDITVALDGPRTG---VFAGTGVDHNGGLSFVRAAVSVSRDVCISDF 474

Query: 397  QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE--LEETEIEGFCSQTQTLF-C 453
            Q ++ +     S D      ++ SF   +RI    + +   LEE     F +  +TL   
Sbjct: 475  QDVRCVCV---SHD-----IIIFSFPGYSRICRYCVGETTVLEELISSTFDTSRETLLLT 526

Query: 454  HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL 513
            +   +   +QVT+  VR+V         E     G  +  A AN   ++ +         
Sbjct: 527  YSDEHEAFLQVTTAGVRIVKPEEGSYLFECA---GNGIEHAHANEGLIVFSNPA------ 577

Query: 514  EIGDGILTEVKH-AQLE--YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNL 570
            E+    + E  H A L   +E SCL +       S+      G W   +V +++L D  +
Sbjct: 578  ELNAFSVREAAHIANLHQVHETSCLWVL---SGSSF----LTGEWGTCAVNLYALVDRAV 630

Query: 571  ITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 630
              K        P S+ + A    + LL  L +G++++  ++ + G  T   +  +  QP+
Sbjct: 631  QHKACFNCSATPCSMCVVARPEGNRLLVGLLNGYVVDVPVD-EVGSSTTVTETVVTMQPV 689

Query: 631  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS--HMCPFNSAAFPDSLAIA 688
             L    S N   V    + P ++  +  +   + V+L +V+   + P  ++     L   
Sbjct: 690  RLFNLESHNA--VLCLGEVPLILIVTETRFQLTGVDLNDVALGAVIPNPNSPLRYILFSK 747

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-----------CSLKNQSC 737
             E  L  G I ++QKL+I  I L     R+     S  F +              K ++ 
Sbjct: 748  TERALIFGNISNVQKLNIDFIGLKATVTRLKFMPWSGIFVVSIRRTDKDQLLAVTKQETL 807

Query: 738  AEESEMH---FVRLLDDQTFEFISTYPLD-TFEYGCSILSCSFSDDSNVYYCVGTAYVLP 793
              +S +     + LL+++   FI +  L  + E+     SC  + + +    +GT +V P
Sbjct: 808  CPDSLLENPTSLELLENERCVFIESTVLGGSNEWS----SCGDAGNKDSVVLIGTTFVFP 863

Query: 794  EENEPTKGRILVFIVEDG-------KLQLIAEKETKGAVY---SLNAFNGKLLAAINQKI 843
             E      R     VE G        L+L    + +GA+    S+  + G++   I+  +
Sbjct: 864  HEQLSRSSRFTWCTVEAGGVAPERATLRLQGRTDVEGALQCCCSVPNYAGRIALGISGCV 923

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQT-RGD--FIVVGDLMKSISLLIYKHEEGA 900
             L+ W   D  +  +  E    G I+   V T +GD  +IV  D+  S   +     +G+
Sbjct: 924  ALFSWNPAD--STFVPEETIRVGTIVTRIVPTVQGDTSYIVACDVRHSCFFIRVDTIQGS 981

Query: 901  IEERARDYNANWM---SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE-------RGR 950
            +   ARD     +   + ++         A++ FN F+V   +      E         R
Sbjct: 982  LSIAARDPELRGVMDGTVIQYPSHHDTCFADDCFNFFSVSHTTPSTDSSEPPPSTITTQR 1041

Query: 951  LEVVGEYHLGEFVNRFRHGSLV--------MRLPDSDVGQI--PTVIFGTVNGVIGVIAS 1000
            L    +YH+G+ +   + GS          + +P + V  +  P + +GT +G  G I  
Sbjct: 1042 LRTTAQYHIGDLITAMQQGSFAPCSVINDFVPVPMALVPGVCGPQIAYGTSHGAFGTITP 1101

Query: 1001 LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR---------------SF----------- 1034
            + +E +L L+ ++ ++  V+  +GG  H  +R               SF           
Sbjct: 1102 VTNETFLLLKSIEISVAAVLPPLGGFCHSSYREVLCAGQERGMSRNTSFEVLNPKAAEVM 1161

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLS--------RTRMDEI---SKTMNVSVEEL 1077
            N  ++    K    GD++E FL +S        +   D+I   S + N S+EE 
Sbjct: 1162 NRRRQKYLPKCVCSGDVVEMFLRMSDSEKRSTIKLASDQIVRWSPSSNTSLEEF 1215


>gi|345779232|ref|XP_532356.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Canis lupus familiaris]
          Length = 1460

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 989  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1048

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1049 KVYAVATSTNMPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1108

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1109 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1167

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1168 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1222

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1223 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1282

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1283 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1336

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1337 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1396

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1397 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1442



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 60/326 (18%), Positives = 140/326 (42%), Gaps = 60/326 (18%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GDVSDRIG 112
            +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      ++ D   
Sbjct: 93  FFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFV 152

Query: 113 RPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FN 155
           +     ++ + DPD R   + +Y     V+PF       +++G + E            +
Sbjct: 153 QNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIID 211

Query: 156 IR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEGP- 206
           +R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +  +   
Sbjct: 212 VRGLDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVH 271

Query: 207 ---WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPI 250
              WS  +L       + VP P+ GV++    +++Y +                  A P+
Sbjct: 272 PVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNGLTTGTTAFPL 331

Query: 251 RPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETS 301
           R   T+   R+  D +        + ++    G +++L +IT     V     +    + 
Sbjct: 332 R---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASV 388

Query: 302 IASTISYLDNAVVYIGSSYGDSQLIK 327
           + +++  ++   +++GS  G+S L+K
Sbjct: 389 LTTSMVTMEPGYLFLGSRLGNSLLLK 414



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 482 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 541

Query: 391 QASVELQGIKGMW------------------------SLRSSTDDPFDTFLVVSFISETR 426
             + EL G   MW                        +L +  D     FL++S    T 
Sbjct: 542 VTTFELPGCYDMWTVIAPVRKEQEETSKGEVAEQESSALEAEDDGRRHGFLILSREDSTM 601

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 651


>gi|344236599|gb|EGV92702.1| Cleavage and polyadenylation specificity factor subunit 1 [Cricetulus
            griseus]
          Length = 1419

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 948  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1007

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1008 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1067

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1068 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1126

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1127 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1181

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1182 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1241

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1242 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1295

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1296 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1355

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1356 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1401



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 118/636 (18%), Positives = 244/636 (38%), Gaps = 174/636 (27%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEESE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL----------------------NLQPD 333
               + + +++  ++   +++GS  G+S L+K                       N +P 
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKASAHNEEPP 423

Query: 334 AKGSYV--------------------------------------EVLERYVNLGPIVDFC 355
           +K   V                                      EV +  +N+GP  +  
Sbjct: 424 SKKKRVDPTAGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAA 483

Query: 356 VVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL- 405
           V +   L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++ 
Sbjct: 484 VGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVI 543

Query: 406 -----------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 442
                                  ++  D     FL++S    T IL      E+ E +  
Sbjct: 544 APVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTS 601

Query: 443 GFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 GFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 637


>gi|410987992|ref|XP_004000273.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Felis catus]
          Length = 1432

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 200/480 (41%), Gaps = 74/480 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 961  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1020

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1021 KVYAVATSTNMPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1080

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1081 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1139

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1140 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1194

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1195 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1254

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1255 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1308

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1309 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1368

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + + + + E  R+
Sbjct: 1369 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILEDLLETDRV 1428



 Score = 46.6 bits (109), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 60/326 (18%), Positives = 140/326 (42%), Gaps = 60/326 (18%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GDVSDRIG 112
            +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      ++ D   
Sbjct: 65  FFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFV 124

Query: 113 RPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FN 155
           +     ++ + DPD R   + +Y     V+PF       +++G + E            +
Sbjct: 125 QNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIID 183

Query: 156 IR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEGP- 206
           +R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +  +   
Sbjct: 184 VRGLDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVH 243

Query: 207 ---WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPI 250
              WS  +L       + VP P+ GV++    +++Y +                  A P+
Sbjct: 244 PVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNGLTTGTTAFPL 303

Query: 251 RPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETS 301
           R   T+   R+  D +        + ++    G +++L +IT     V     +    + 
Sbjct: 304 R---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASV 360

Query: 302 IASTISYLDNAVVYIGSSYGDSQLIK 327
           + +++  ++   +++GS  G+S L+K
Sbjct: 361 LTTSMVTMEPGYLFLGSRLGNSLLLK 386



 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 454 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 513

Query: 391 QASVELQGIKGMW------------------------SLRSSTDDPFDTFLVVSFISETR 426
             + EL G   MW                        +L +  D     FL++S    T 
Sbjct: 514 VTTFELPGCYDMWTVIAPVRKEQEETSKGEGAEQEPSTLEAEDDGRRHGFLILSREDSTM 573

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 574 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 623


>gi|383863556|ref|XP_003707246.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Megachile rotundata]
          Length = 1415

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 232/529 (43%), Gaps = 84/529 (15%)

Query: 627  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 683
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  ++   PFN+   P 
Sbjct: 897  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPITSFAPFNNINCPQ 956

Query: 684  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA 738
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +    S A
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVIT----SIA 1012

Query: 739  EESEMHFVRLLDDQTF-------EFI-----------------STYP-----LDTFEYGC 769
            E  + ++    +D+ F        FI                  T P     LD +E+  
Sbjct: 1013 EPLKSYYRFNGEDKEFTEEDRPDRFIFPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVT 1072

Query: 770  SILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKL 813
             + + S + +        Y  +GT Y   E+   ++GRIL+F I+E            + 
Sbjct: 1073 CLKNVSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRF 1131

Query: 814  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILA 870
            + I  KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L+
Sbjct: 1132 KQIYAKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLS 1188

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---- 926
            +        I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG    
Sbjct: 1189 I-----KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNNNLGFLVA 1243

Query: 927  -AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP- 984
              E+N  LF  +  S  +   +  +L    ++HLG+ VN F      +  P +D      
Sbjct: 1244 DGESNIALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFRIRCRISDPANDKKHFSG 1301

Query: 985  -----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
                   ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +
Sbjct: 1302 ADKRHVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSYIR 1361

Query: 1040 TV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
            T    A+  +DGDL+  +L L      +++K +   V+E+ + + E+ R
Sbjct: 1362 TQGNPARGIIDGDLVWRYLYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1410



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/394 (19%), Positives = 157/394 (39%), Gaps = 78/394 (19%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-----------------QGLQP 52
            H  T V H+    F +  E  L++A    I +  L P                   L+ 
Sbjct: 8   THPATGVEHAITCYFFNRTEKCLVVAGGNIIRVFRLIPDVDITKREKYTESRPPKMKLEC 67

Query: 53  MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG 112
           +    ++G + +++     G  +D L ++    K  V+++D +  +L T ++    +   
Sbjct: 68  LAQYTLHGNVMSMQAVTLVGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEEI 127

Query: 113 RP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF------------------DNKGQL 150
           R   T++  I I+  DP+ R   + +Y     V+PF                   NK  +
Sbjct: 128 RDGWTNHHHIPIVRVDPEGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKASSNKTPI 187

Query: 151 KEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYEVALK- 198
             ++ I L+ L+     ++D++FL+G  +PT+++LY+  +        R      VA+  
Sbjct: 188 LSSYMIVLKSLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISL 247

Query: 199 --DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------AN 243
              +      WS +NL       +PV  PL G LI+   +++Y +             A 
Sbjct: 248 NIQQRVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYGVSLNSLAE 307

Query: 244 AFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKI 294
                P++P   +   ++  +GS        R ++   +G L++L +       V G   
Sbjct: 308 TSTNFPLKP---QEGVKISLEGSQVAFISSDRLVISLKSGELYVLSLFADSMRSVRGFHF 364

Query: 295 ELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           +    + + S +   D+  +++GS  G+S L++ 
Sbjct: 365 DKAAASVLTSCVCMCDDNYLFLGSRLGNSLLLRF 398



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%)

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 416
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 505 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGALNNDEQVRPEAEGSHAF 564

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 565 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLLQGI 622

Query: 476 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 623 --EQIQHMPIDLGCPIVHASCADPYVSLLSEDGQVMLLTLREGRGTAKLHAQ 672


>gi|1045574|gb|AAC50293.1| cleavage and polyadenylation specificity factor [Homo sapiens]
          Length = 1442

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 195/465 (41%), Gaps = 73/465 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 972  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1031

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1032 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1091

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1092 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1150

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1151 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1205

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1206 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1265

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP---- 976
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1266 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRAT 1319

Query: 977  -----DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 1030
                  S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   
Sbjct: 1320 EGLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRA 1379

Query: 1031 WRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            +R  + +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1380 FRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1424



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 118/633 (18%), Positives = 242/633 (38%), Gaps = 171/633 (27%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH P  +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPPGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLI----KLNLQP------------------- 332
               + + +++  ++   +++GS  G+S L+    KL   P                   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKR 423

Query: 333 -DAKGSY--------------------------------VEVLERYVNLGPIVDFCVVD- 358
            DA   +                                 EV +  +N+GP  +  V + 
Sbjct: 424 VDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEP 483

Query: 359 --LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL----- 405
             L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++     
Sbjct: 484 AFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVR 543

Query: 406 RSSTDDP--------------------FDTFLVVSFISETRILAMNLEDELEETEIEGFC 445
           +   D+P                       FL++S    T IL      E+ E +  GF 
Sbjct: 544 KEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFA 601

Query: 446 SQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 TQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 634


>gi|338728511|ref|XP_001505047.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like isoform 1 [Equus caballus]
          Length = 1444

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 973  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1032

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1033 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1092

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1151

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1206

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1207 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1266

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1267 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1320

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1321 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1380

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1381 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1426



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/395 (18%), Positives = 163/395 (41%), Gaps = 81/395 (20%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQP----------------- 52
           AH PT +  S   NF +  E NL++A  +++ ++ L      P                 
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEAPTKNDRNAEGKAHREHRE 67

Query: 53  ----MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM---- 104
               +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    
Sbjct: 68  KLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFE 127

Query: 105 -GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA--- 153
             ++ D   +     ++ + DPD R   + +Y     V+PF       +++G + E    
Sbjct: 128 EPELRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRS 186

Query: 154 -------FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALK 198
                   ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +   
Sbjct: 187 SFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 246

Query: 199 DKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS------------- 241
             +  +      WS  +L       + VP P+ GV++    +++Y +             
Sbjct: 247 SLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSL 306

Query: 242 ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGL 292
                A P+R   T+   R+  D +        + ++    G +++L +IT     V   
Sbjct: 307 TTGTTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAF 363

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
             +    + + +++  ++   +++GS  G+S L+K
Sbjct: 364 HFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK 398


>gi|241060959|ref|XP_002408050.1| cleavage and polyadenylation specificity factor, putative [Ixodes
            scapularis]
 gi|215492346|gb|EEC01987.1| cleavage and polyadenylation specificity factor, putative [Ixodes
            scapularis]
          Length = 1241

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 35/323 (10%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAF 831
            Y  +GT Y   E+   ++GRI +  + D            K++++  KE KG V +L+  
Sbjct: 916  YLALGTNYCYGEDVT-SRGRITILDIIDVVPEPGQPLTKNKIKIVYSKEQKGPVTALSQV 974

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
             G LL+AI QK  +Y W L+D+G   L         I    V T  + I+VGD+ KS+SL
Sbjct: 975  VGFLLSAIGQK--MYIWQLKDNG---LVGVAFIDTQIYIHSVVTVKNLILVGDVFKSVSL 1029

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 946
            L Y+     +   +RD     + AVE   D+  +      +E N  L+  +  S  +   
Sbjct: 1030 LRYQEASRTLSLVSRDVRPLEVFAVEFFIDNSQMSFLVTDSERNMILYMYQPESRESCGG 1089

Query: 947  ERGRLEVVGEYHLGE-----FVNRFRHGSLV---MRLPDSDVGQIPTVIFGTVNGVIGVI 998
            +  RL   G++H+G      F  + R G +     RL  S  G+  T++  T++G +G +
Sbjct: 1090 Q--RLLRRGDFHIGSPVVSMFRIKCRMGEVAKHDRRLAASVDGRHITML-ATLDGSLGYV 1146

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFL 1056
              +P + Y  L  LQ  L   +    GLN + +R ++++++ +    KN LDG+LI  F+
Sbjct: 1147 LPVPEKTYRRLLMLQNVLVTNMPHYAGLNPKAFRMYHSQRRVLGNPHKNILDGELIWKFM 1206

Query: 1057 DLSRTRMDEISKTMNVSVEELCK 1079
             LS     E+SK +  +V ++ +
Sbjct: 1207 HLSFMERSELSKKIGTTVTQVVQ 1229



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 221/566 (39%), Gaps = 129/566 (22%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVP--------- 57
            H PT V HS   NF + +E +L++A  + +++  L P+   G   M  +P         
Sbjct: 8   THPPTGVEHSIYCNFYNSRERSLVVAGSSVLKVFRLVPENDGGYVQMTQLPMIRVDPCNR 67

Query: 58  -----IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG 112
                ++ R   +  FR    A++     T   K  +L W          A+ ++ ++I 
Sbjct: 68  CAAMLVFSRTIAVVPFRKDTAAEEQETGPTFGNKPPLLDW-------YPVALTELDEKIN 120

Query: 113 RPTDNGQI-GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDI 166
              D   + G  +P      L LY+ L     +  K  L + + + L EL      V+D+
Sbjct: 121 NVIDMQFLHGYYEPTL----LILYEPLRT---WPGKPPLLDWYPVALTELDEKINNVIDM 173

Query: 167 KFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQN--NLDNGADLLIPVPP 224
           +FL+G  +PT+++LY+     R    Y + L    F +G  S    N D  A  ++    
Sbjct: 174 QFLHGYYEPTLLILYE---PLRTWPGYVLTL----FNDGMRSVRNFNFDKAAASVLTTSM 226

Query: 225 PLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITH 284
            LC      EE  ++                         GSR  LG+ + LLH      
Sbjct: 227 TLC------EEGYLFL------------------------GSR--LGN-SLLLHYTEKAA 253

Query: 285 EKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLER 344
           E E+    + +  G+ ++A  +   D   VY   +    QL              EV + 
Sbjct: 254 EMEEAGKKEDKAEGDVNVA--LIDPDELEVYGSETLATKQLTSYTF---------EVCDS 302

Query: 345 YVNLGPIVDFCVVDL----ERQGQG-----QVVTCSGAYKDGSLRIVRNGIGINEQASVE 395
            +N+GP    C+ +     E   Q      ++VT +G  K+G+L +++  +      + E
Sbjct: 303 LINIGPCGKICMGEPAFLSEEFTQNSDPDLELVTTAGYGKNGALCVLQRSVRPQVVTTFE 362

Query: 396 LQGIKGMWSLRS--------------------STDDPFDTFLVVSFISETRILAMNLEDE 435
           L G   MW++                      +T      FL++S    + IL    + E
Sbjct: 363 LPGCVHMWTVMGPPTEKKKKEASEESDEQAADATLTNTHAFLILSRADSSMIL--QTDQE 420

Query: 436 LEETEIEGFCSQTQTLFC---HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
           + E +  GF +Q  T+F     D  Y  ++QV    VRL+  T R+L++      G  + 
Sbjct: 421 INELDHSGFSTQNPTVFAGNLGDGRY--VLQVCPMGVRLLDGT-RQLQH-IPLDVGSPIV 476

Query: 493 VATANASQVLLATGGGHLVYLEI-GD 517
             +     VL+ + GG +V+L + GD
Sbjct: 477 GGSLADPHVLIRSEGGLVVHLTLRGD 502


>gi|338728513|ref|XP_003365689.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Equus caballus]
          Length = 1450

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 979  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1038

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1039 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1098

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1099 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1157

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1158 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1212

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1213 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1272

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1273 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1326

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1327 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1386

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1387 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1432



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/395 (18%), Positives = 163/395 (41%), Gaps = 81/395 (20%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQP----------------- 52
           AH PT +  S   NF +  E NL++A  +++ ++ L      P                 
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEAPTKNDRNAEGKAHREHRE 67

Query: 53  ----MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM---- 104
               +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    
Sbjct: 68  KLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFE 127

Query: 105 -GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA--- 153
             ++ D   +     ++ + DPD R   + +Y     V+PF       +++G + E    
Sbjct: 128 EPELRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRS 186

Query: 154 -------FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALK 198
                   ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +   
Sbjct: 187 SFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 246

Query: 199 DKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS------------- 241
             +  +      WS  +L       + VP P+ GV++    +++Y +             
Sbjct: 247 SLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSL 306

Query: 242 ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGL 292
                A P+R   T+   R+  D +        + ++    G +++L +IT     V   
Sbjct: 307 TTGTTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAF 363

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
             +    + + +++  ++   +++GS  G+S L+K
Sbjct: 364 HFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK 398


>gi|444523674|gb|ELV13604.1| Cleavage and polyadenylation specificity factor subunit 1 [Tupaia
            chinensis]
          Length = 1469

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 197/468 (42%), Gaps = 78/468 (16%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 998  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1057

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1058 KVYAVATSTNAPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1117

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1118 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1176

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1177 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1231

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1232 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1291

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVV--GEYHLGEFVNRFRHGSLVMRLPDS 978
             LG   ++ + NL       E    E  G L ++   ++HLG  VN F       R P  
Sbjct: 1292 QLGFLVSDRDRNLMVYMYLPEA--KESFGGLLLLRRADFHLGAHVNTF------WRTPCR 1343

Query: 979  DVGQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 1027
               + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN
Sbjct: 1344 GAVEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLN 1403

Query: 1028 HEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
               +R  + +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1404 PRAFRMLHVDRRTLQNAVRNVLDGELLSRYLYLSTMERSELAKKIGTT 1451



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/389 (19%), Positives = 163/389 (41%), Gaps = 72/389 (18%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVE--GP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFK---AIPIRPSI 254
             +   P  WS  +L       + VP P+ GV++    +++Y + +      A+    + 
Sbjct: 247 ITQRVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTAG 306

Query: 255 TKAYGRVDADGSRYLLG-DHAGLLH---------------LLVITHEKEKVTGLKIELLG 298
           T A+     DG R  L   HA  +                L ++T     V     +   
Sbjct: 307 TTAFPLRTQDGVRLTLDCAHAAFISYDKMVISLKGGEIYVLTLVTDGMRSVRAFHFDKAA 366

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            + + +++  ++   +++GS  G+S L+K
Sbjct: 367 ASVLTTSMVTMEPGYLFLGSRLGNSLLLK 395


>gi|334326317|ref|XP_001364707.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Monodelphis domestica]
          Length = 1449

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 200/480 (41%), Gaps = 74/480 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 978  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1037

Query: 725  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFI--ST 759
            + +A+ +  N  C        EE E   +                +L+   ++E I  + 
Sbjct: 1038 KVYAVATSTNALCTRIPRMTGEEKEFETIERDERYIHPLQEAFSIQLISPVSWEAIPNAR 1097

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1098 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1156

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1157 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1211

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D  
Sbjct: 1212 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDSA 1271

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1272 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1325

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1326 AEGPSKKSIVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1385

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1386 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLEIDRV 1445



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 124/285 (43%), Gaps = 56/285 (19%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT---------------------PQ 48
           AH PT +  S   NF S  E NL++A  +++ ++ L                       +
Sbjct: 8   AHPPTGLEFSMYCNFFSNAERNLVVAGTSQLYVYRLNHDAETSTKSDRNAEGKLHKEHKE 67

Query: 49  GLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM---- 104
            L+ +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    
Sbjct: 68  KLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFE 127

Query: 105 -GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA--- 153
             ++ D   +     ++ + DPD R   + +Y     V+PF       +++G + E    
Sbjct: 128 EPELRDGFVQNVHTPRVRV-DPDGRCAVMLIYGTRLVVLPFRRESLAEEHEGLVGEGQKS 186

Query: 154 -------FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALK 198
                   ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +   
Sbjct: 187 SFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 246

Query: 199 DKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
             + ++      WS  NL       + VP P+ GV+I    +++Y
Sbjct: 247 SLNILQKVHPVIWSLTNLPFDCTQALAVPKPIGGVVIFAVNSLLY 291


>gi|395860104|ref|XP_003802355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Otolemur garnettii]
          Length = 1441

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 TEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1423



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 74/392 (18%), Positives = 164/392 (41%), Gaps = 78/392 (19%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGIEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEVLTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
               + + +++  ++   +++GS  G+S L+K
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK 395



 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 36/172 (20%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 463 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 522

Query: 391 QASVELQGIKGMWSLRSST------------------------DDPFDTFLVVSFISETR 426
             + EL G   MW++ +S                         D     FL++S    T 
Sbjct: 523 VTTFELPGCYDMWTVIASVRKEEEETPKGEGTEQESGVPEGEEDGRRHGFLILSREDSTM 582

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 583 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|157110889|ref|XP_001651294.1| cleavage and polyadenylation specificity factor cpsf [Aedes aegypti]
 gi|108883895|gb|EAT48120.1| AAEL000832-PA [Aedes aegypti]
          Length = 1417

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 237/538 (44%), Gaps = 79/538 (14%)

Query: 613  KTGELTDRKKVSLGTQPITL-RTFSSKNTTH-VFAASDRPTVIYSSNK-----KLLYSNV 665
            + GE  D     +  + I++ R F++ N  + V    ++P ++  +++       LY+  
Sbjct: 886  QEGEKPDEHSTKIMYENISMIRYFNNVNGYNGVAVCGEKPYIMLLTSRGELRAHRLYAKT 945

Query: 666  NLKEVSHMCPFNSAAFPDS-LAIAKEGELTIG------TIDDIQKLHIRSIPLGEHPRRI 718
             +K  +   PFN+   P+  L   ++ EL I       + D I    +R IPL   P++I
Sbjct: 946  IMKGFA---PFNNVNCPNGFLYFDEQYELKIAVFPGYLSYDSIWP--VRKIPLRSSPKQI 1000

Query: 719  CHQEQSRTFAICSLKNQSC-------AEESEM----------------HFVRLLDDQTFE 755
             + ++++ + +     + C        E+ E+                  V L+    +E
Sbjct: 1001 VYHKENKVYCVVMDAEEVCNKYYRFNGEDKELTEENKGERFLYPMAHKFSVVLVTPSAWE 1060

Query: 756  FI--STYPLDTFEYGCSILSCSFSDDS-----NVYYCVGTAYVLPEENEPTKGRILVF-- 806
             I  ++  LD +E+  ++ + S S +        Y  VGT +    E+  ++GR+L++  
Sbjct: 1061 IIPETSINLDEWEHVIALKNVSLSYEGARSGFKEYIAVGTNFNY-SEDITSRGRLLLYDI 1119

Query: 807  ---IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRE 857
               + E GK       + +  KE KG V ++   +G L+ A+ QK+  Y W L+DD   +
Sbjct: 1120 IEVVPEPGKPLTRYKFKEVIVKEQKGPVSAITHVSGFLVGAVGQKV--YLWQLKDD---D 1174

Query: 858  LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
            L        +I    + +    I+V D+ KS+SLL ++ +   +   +RDY    +  +E
Sbjct: 1175 LVGVAFIDTNIFVHQLVSIKSLILVADVYKSVSLLRFQEDYRTLSLVSRDYQPLNVFQIE 1234

Query: 918  ILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-FR-----H 968
             + D+  LG   ++   N+ T     E        RL    +YH+G+ +N  FR     H
Sbjct: 1235 YVVDNHNLGFLVSDEQCNIITYMYQPESRESFGGQRLLRKCDYHVGQKINSMFRVQCDFH 1294

Query: 969  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 1028
                 R  +S+     T  F T++G IG +  LP + Y  L  LQ  L      + GLN 
Sbjct: 1295 EMDYKR--NSNYECKHTTYFATLDGGIGYVLPLPEKTYRRLFMLQNVLMTHSPHLCGLNP 1352

Query: 1029 EQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            + +R+    KK     A+  +DGDLI +FL L      E++K +   ++++C  + E+
Sbjct: 1353 KAFRTIKTVKKLPINPARCVVDGDLIWTFLTLPANEKLEVAKKIGTRIDDICADLMEI 1410



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 127/608 (20%), Positives = 233/608 (38%), Gaps = 150/608 (24%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-----------------LQP 52
            H+ T V  S   +F +  E +L+      ++++ L P                   L+ 
Sbjct: 8   THEATAVEFSVTCHFFNSNEKSLVTGGANVLKVYRLIPDADATSRDKFTTTRPPNMKLEC 67

Query: 53  MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG--DVSDR 110
           M    ++G I +++     G  +D L I+ +  K  V+Q+D ++ EL T ++   +  D 
Sbjct: 68  MATYTLFGNIMSMQSVSLAGSQRDALLISFQDAKLSVVQFDPDNFELKTLSLHYFEEEDI 127

Query: 111 IGRPTDNGQIGII--DPDCRLIGLHLYDGLFKVIPFDNKGQLKE---------------- 152
            G  T +    I+  DPD R   + +Y     V+PF     L E                
Sbjct: 128 KGGWTGHYHTPIVRVDPDNRCAVMLVYGRKLVVLPFRKDSSLDEIEVQDVKPMKKAPTQL 187

Query: 153 --------AFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTY 193
                   ++ I L+E +     V+DI+FL+G  +PT+++LY+  K        R     
Sbjct: 188 IAKTPILASYVIELKESEERIDNVIDIQFLHGYYEPTLLILYEPVKTFPGRIAVRSDTCM 247

Query: 194 EVALK---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS--------- 241
            VAL     +      W+ N L       I +  P+ G LI+    ++Y +         
Sbjct: 248 MVALSLNIQQRVHPVIWTVNCLPFDCLQAIAISKPIGGCLILSVNALIYLNQSVPPYGVS 307

Query: 242 ----ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLLVITHEKEK- 288
               A+     P++P   +   R+  D +        + +L    G L++L +  +  + 
Sbjct: 308 LNSIADHCTNFPLKP---QDGVRISLDAAQVCFIEPEKLVLSLKGGELYVLTLCADSMRS 364

Query: 289 VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAK------------- 335
           V          + +   I  ++   +++GS  G+S L++   + ++              
Sbjct: 365 VRSFHFSKAASSVLTCCICVVEEEYLFLGSRLGNSLLLRFKEKDESMVITIDDTEEVVEK 424

Query: 336 -------------------------GSYV-EVLERYVNLGPIVDFCV---VDLERQGQG- 365
                                     SY+ EV +  +N+GPI    V   +  E Q +  
Sbjct: 425 EPKRLRLEQEELEVYGSGQKTSVQLTSYIFEVCDSILNIGPIGHMAVGERISEEEQDENK 484

Query: 366 -----------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFD 414
                      ++VT SG  K+G+L +++N I      S  L G   +        D   
Sbjct: 485 DVQFVPNKLDLEIVTSSGHGKNGALCVLQNSIKPQVITSFGLSGCLDV--------DDMH 536

Query: 415 TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVS 473
           +F+++S   E   + +   DE+ E E  GF +   T+   +   N+ +VQVT+ S+RL+ 
Sbjct: 537 SFMILS--QEAGTMVLQTGDEINEIENTGFATNVPTIHVGNIGGNRFIVQVTTKSIRLLQ 594

Query: 474 STSRELRN 481
            T R L+N
Sbjct: 595 GT-RLLQN 601


>gi|345482082|ref|XP_001607052.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Nasonia vitripennis]
          Length = 1415

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 225/519 (43%), Gaps = 74/519 (14%)

Query: 632  LRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSN-VNLK-EVSHMCPFNSAAFPDS-LAI 687
            +R FS+      VF   D P  I+ + +  L ++ +N+   V    PFN+   P   L  
Sbjct: 902  MRYFSNIAGYNGVFIGGDYPHWIFLTGRGELRAHPMNIDGPVKSFAPFNNVNCPQGFLYF 961

Query: 688  AKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LKN---- 734
             ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK+    
Sbjct: 962  NRKDELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVVTSTAEPLKSYYRF 1021

Query: 735  -----QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILSCSFSD 778
                 +   EE    F+    +Q     F  +S  T P     LD +E+   + + S + 
Sbjct: 1022 NGEDKEFTEEERNERFLYPTQEQFSIVLFSPVSWDTIPNTKIDLDQWEHVTCLKNVSLAY 1081

Query: 779  DSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIAEKETK 822
            +        Y  +GT Y   E+   ++GRI +F I+E            + + I  KE K
Sbjct: 1082 EGTRSGLKGYIVIGTNYNYGEDIT-SRGRIFIFDIIEVVPEPGQPLTKNRFKQIYAKEQK 1140

Query: 823  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 882
            G V ++   +G L++AI QKI  Y W L+D+   +L         I    + +    I+V
Sbjct: 1141 GPVTAITQVSGFLVSAIGQKI--YIWQLKDN---DLVGVAFIDTQIYVCQMLSIKSLILV 1195

Query: 883  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVR 937
             D+ KS+SLL ++ E   +   +RD+    + A+E    +  LG      E+N ++F+ +
Sbjct: 1196 ADVYKSVSLLRFQPEYKTLSLVSRDFRTTEIYAIEYFIQNNELGFIVADGESNISIFSYQ 1255

Query: 938  KNSEGATDEERGRLEVVGEYHLGEFVNRFRH--------GSLVMRLPDSDVGQIPTVIFG 989
              S  +   ++  L    + HLG+ +N F           +   +   +D   +   ++ 
Sbjct: 1256 PESSQSLGGQK--LIRKADIHLGQKINTFFRIKCKTTDSANPTKQFSGADKRHV--TMYA 1311

Query: 990  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN--EKKTVDAKNFL 1047
            T++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +    +   A+  +
Sbjct: 1312 TLDGSLGYILPVPEKTYRRLLMLQNVLVSHIYHIAGLNPKAFRTYKSCVRMQGNPARGII 1371

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
            DGDL+  +LDL      EI+K +    +E+   + E+ +
Sbjct: 1372 DGDLVRKYLDLPVNEKIEIAKKIGTGAQEIMDDMHEIYK 1410



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 136/670 (20%), Positives = 253/670 (37%), Gaps = 154/670 (22%)

Query: 9   TAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-----------------QGLQ 51
           T H  T V H+   NF +  E  L++A    I +  L P                   L+
Sbjct: 7   TTHPATGVEHAITCNFFNRAEKCLVVAGANIIRVFRLIPDVDPGKKEKFTESRPPKMRLE 66

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G + +++  +  G  +D L ++    K  V+++D E   L T ++    +  
Sbjct: 67  CLAQYTLHGNVMSMQAVQLIGSPRDSLLLSFREAKLSVVEYDPEIHSLRTVSLHYFEEEE 126

Query: 112 GRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF------------------DNKGQ 149
            +   T++  + I+  DP+ R   + +Y     V+PF                   +K  
Sbjct: 127 IKDGWTNHHHVPIVRVDPEGRCAVMLIYGRKLVVLPFRKDPILDEGDLIENPKSSSHKTP 186

Query: 150 LKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYEVALK 198
           +  ++ I L+ L+     ++D++FL+G  +PT+++LY+  +        R      VA+ 
Sbjct: 187 ILSSYMIVLKSLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFAGRIAVRQDTCAMVAIS 246

Query: 199 ---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY---------CSANAFK 246
               +      WS +NL       + V  PL G LI+   +++Y          S N+  
Sbjct: 247 LNIQQKVHPIIWSVSNLPFDCYQAVAVKKPLGGTLIMAVNSLIYLNQSIPPYGVSLNSLT 306

Query: 247 ----AIPIRP----SITKAYGRVD-ADGSRYLLGDHAGLLHLL-VITHEKEKVTGLKIEL 296
                 P++P     I+    +V      R ++    G L++L +       V G   + 
Sbjct: 307 DNCTNFPLKPQEGVKISLESSQVAFISPDRLVISLKTGELYVLSLFADSMRSVRGFHFDK 366

Query: 297 LGETSIASTISYLDNAVVYIGSSYG----------------DSQLIKLNL-------QPD 333
              + + S +   D+  +++GS  G                D  +++++L       QP 
Sbjct: 367 AAASVLTSCVCLCDDNYLFLGSRLGNSLLLRFTEKESEKINDISMLEMSLNSSNSQEQPT 426

Query: 334 AK------------------------------------GSYV-EVLERYVNLGPIVD--- 353
            K                                     SY+ EV +  +N+GP  +   
Sbjct: 427 KKIKLDYLEDWMASDVLDIKDPEELEVYGSETQTSIQITSYIFEVCDSLLNIGPCGNISM 486

Query: 354 ----FCVVDLERQGQGQV--VTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS 407
               F   +     +  V  VT SG  K+G+L +++  I      + +L G + +W++  
Sbjct: 487 GEPAFLSEEFSNNSEPDVELVTTSGYGKNGALCVLQRSIRPQVITTFDLPGYENIWTVID 546

Query: 408 ST--DDPFDT-------FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 458
           ST  D+   T       FL+++    T +L    E   E  +  GF +Q  T+F  +   
Sbjct: 547 STVSDNRAKTETEGTHGFLILTQDDSTMVLQTGQEIN-EVVDQSGFSTQGTTIFAGNLGS 605

Query: 459 NQ-LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 517
           N+ ++QVT   VRL+     E         G  +  A+     V L +  G +V L + +
Sbjct: 606 NRYIIQVTQMGVRLLQGL--EQIQHMPMDLGCPIVHASCADPYVSLLSEDGQVVLLTLRE 663

Query: 518 GILTEVKHAQ 527
           G  T   HAQ
Sbjct: 664 GRGTARLHAQ 673


>gi|67472417|ref|XP_652013.1| splicing factor 3B subunit 3 [Entamoeba histolytica HM-1:IMSS]
 gi|56468814|gb|EAL46625.1| splicing factor 3B subunit 3, putative [Entamoeba histolytica
            HM-1:IMSS]
 gi|449709507|gb|EMD48761.1| premRNA-splicing factor rse-1, putative [Entamoeba histolytica KU27]
          Length = 1145

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 226/1173 (19%), Positives = 452/1173 (38%), Gaps = 151/1173 (12%)

Query: 16   VTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQG-LQPMLDVPIYGRIATLELFRPHGE 73
            +THS  G+F+    + L+I +  T IE++ +     +  +L   ++  I ++   R   E
Sbjct: 14   ITHSLFGDFSGNGAIELLIVRSQTTIELYRINENDQVLLILQESVFCMIRSMCKIRVGSE 73

Query: 74   AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIIDPDCR--LI 130
            A+D++ I ++     +L + +E ++LI     ++  + G R    G+    DP  R  +I
Sbjct: 74   AKDYILIGSDSGSITLLGYSSEQNKLIP-IYNEIFGKSGIRRVVPGEYICSDPMGRAAMI 132

Query: 131  GLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKPTIVVL------- 180
            G      L  +   D+ G++  +  +   +   +    I    G   P    +       
Sbjct: 133  GAIEKQKLVYIFNRDSNGKITISSPLEAHKSNTICYNIIALNVGYDNPMFATIEVDYNEQ 192

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV----PPPLCG 228
            Y  + + R +K Y V      F E     N+        +D  ++ LIP+         G
Sbjct: 193  YLSHIEHRIIKKYVV------FYELDLGLNHVIRKVAEPIDPTSNYLIPILSLNEGYHYG 246

Query: 229  VLIIGEETIVYCSANAFK-AIPI---------RPSITKAYGRVDADGSRYLL--GDHAGL 276
            + I  E+ I + +    K +IPI           ++  ++      G  ++L   +   L
Sbjct: 247  IFICSEDKITWFNIGHDKISIPIPKYHNQSNTHSTLITSHVMRTHKGKHFVLLQSEFGDL 306

Query: 277  LHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL--------IKL 328
              L   T EK ++  + ++       A ++ +           YGDS L        I +
Sbjct: 307  FQLSFDTKEKGQLDNIHLKYFDSIPTALSLQFSKRGHFLCVGEYGDSILYNIISMENISI 366

Query: 329  NLQPDAKGSY--------VEVLERYVNLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSL 379
              + D +  +        +E + R+ +L P++D  V      Q   ++    G     ++
Sbjct: 367  PFEKDGRLEFERHKEILNLEEIYRFKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTI 426

Query: 380  RIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            +I++N +   +   +EL  I   +W L+  TD+ +  +L +S+ + T +L +  EDE+ E
Sbjct: 427  KILKNQLNTLDAVEIELPAIPISIWPLKKETDE-YHQYLAISYSNITTLLKIT-EDEMSE 484

Query: 439  TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA 498
                     T +L          +QV +  + + S   ++   E +         A+ N 
Sbjct: 485  CTTSPILLSTPSLLVSMLFDGTFLQVMTDRIIIYSEPIQQFITEDQK-----YVCASCNG 539

Query: 499  SQVLLATGGGH---LVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 555
             +++++    +   L+Y +   G L  ++      +I+ L ++    +PS  +  A+G  
Sbjct: 540  CELIVSVEKNNQTSLIYFQYQSGHLLTMERKDNLSKITALALDQF--HPS--KHCAIGC- 594

Query: 556  TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF---EGISYLLCALGDGHLLNFLLN 611
             D SV + SL P+        +  +    S+    F   +  SYL   L +G L   + +
Sbjct: 595  IDGSVHLLSLIPNETTKALSRVSLQTYECSINSLTFNIIDNTSYLFAGLSNGLLGRSVYD 654

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
              +GE+ +     +G++P+TL          V A S R  + Y +  K+  + +N++  +
Sbjct: 655  PISGEINESSLNFVGSRPVTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTT 714

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC 730
              C        +++AI  E  + I TI+     L  ++I +   PR++          I 
Sbjct: 715  LACGILVPFVDNAIAIICEKVMKIITIESTSSSLTGKNIQISYTPRKVITHPTIPLLYIL 774

Query: 731  SLKNQSCAEESEM---------HFVRLLDDQTFEFISTYPLDTFEY---GCSILSCSFSD 778
               N SC   +E+           +  LD    E I     D  ++   GC + S S   
Sbjct: 775  EGDNNSCKVGNEIIQTNEGNWVGGIHTLDASQDELIQFIDFDNNKHPTGGCVVRSIS--- 831

Query: 779  DSNVYYCVGTAYVLPEENEPTKGR---ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
             +  Y  +G   +   +  P + +   I V+ + +  +      + +  V +   F G +
Sbjct: 832  KNQTYLIIGV--IESYKTRPIQWKSSEIQVYSINERSINYCYSTKVEYPVRAFAEFKGMV 889

Query: 836  LAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            LA +   ++LY    K +LR    R+  S+           +   G+ I++  +    +L
Sbjct: 890  LAGVGNILRLYDIGLKSLLRKAEKRQFASDIAQ--------LHVIGETILLTGVSDGFNL 941

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF----------------- 934
            + Y       +  A D    W+     L+    L ++    +F                 
Sbjct: 942  IRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEIEEQALNPFS 1000

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
            T+ +  +   +    ++    ++ +G+    F   SL+   P          IF   N +
Sbjct: 1001 TLLQPHKTIYEGSSYKMVTATQFFVGDIATSFAQCSLIPGAPS---------IFLYSNFM 1051

Query: 995  IGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
             G+ A +P        F + L+ ++R     +   NH  +RS       V  K+ +DGDL
Sbjct: 1052 GGLSALIPLQSQNDIDFYQHLEMHMRVHWTNLTDRNHISFRS-----SIVPVKDTVDGDL 1106

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             E +  L      EI++ M   V E+ K++ +L
Sbjct: 1107 CELYERLPYEIQQEIAEEMEKEVNEIIKKLHDL 1139


>gi|403302917|ref|XP_003942095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Saimiri boliviensis boliviensis]
          Length = 1390

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 194/460 (42%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 919  VDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 978

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 979  KVYAVATSTNTPCTRIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1038

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1039 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1097

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1098 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1152

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1153 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1212

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1213 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1272

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1273 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1332

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1333 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1372


>gi|432883539|ref|XP_004074300.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Oryzias latipes]
          Length = 1456

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 208/483 (43%), Gaps = 80/483 (16%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 985  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHFVSYHVES 1044

Query: 725  RTFAICSLKNQSCA---------------EESEMHFVRLLDDQTFEFIS-----TYP--- 761
            + +A+C+   + C                E  E +   L +  + + IS     T P   
Sbjct: 1045 KVYAVCTSVKELCTRIPRMTGEEKEFETIERDERYINPLQEKFSIQLISPVSWETIPNTR 1104

Query: 762  --LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + +      V     Y   GT  VL  E    +GRIL+      + E
Sbjct: 1105 IDLEEWEHVTCMKTVALRSQETVSGLKGYIAAGTC-VLQGEEVTCRGRILILDVIEVVPE 1163

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQS 860
             G      K +++ EKE KG V +L   +G L++AI QKI L  W L+D+   G   + +
Sbjct: 1164 PGQPLTKNKFKVLYEKEQKGPVTALCHCHGYLVSAIGQKIFL--WALKDNDLTGMAFIDT 1221

Query: 861  ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            +   H  I      +  +FI+  D+MKSISLL Y+ E   +   +RD     + ++E + 
Sbjct: 1222 QLYIHQMI------SIKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSIEFIV 1275

Query: 921  DDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP- 976
            D+  LG   ++ + NLF      E        RL    +++ G  +N       + R+P 
Sbjct: 1276 DNNQLGFLVSDRDKNLFVYMYLPEAKESFGGMRLLRRADFNAGAHINS------LWRMPC 1329

Query: 977  ----DSDVGQIPT------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 1026
                DS   +  T        F T++G IG++  +  + Y  L  LQ  L  ++    GL
Sbjct: 1330 RGALDSGSKKALTWDNKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGL 1389

Query: 1027 NHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            N + +R  ++ ++++    KN LDG+L+  +L LS     E++K +  + + +   + E+
Sbjct: 1390 NPKAFRMMHSNRRSLQNAVKNILDGELLAKYLYLSTMERSELAKKIGTTQDIILDDLLEI 1449

Query: 1085 TRL 1087
             R+
Sbjct: 1450 DRV 1452



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/389 (19%), Positives = 162/389 (41%), Gaps = 72/389 (18%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT------------------PQGLQ 51
           AH PT V  S   NF S +E NL++A  +++ ++ +                    + L+
Sbjct: 8   AHTPTAVEFSVYCNFISSREKNLVVAGTSQLFVYRIIHDVESTSSSDKSSDAKTRKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G + ++   +  G ++D L ++ +  K  V+++D  + +L T ++    +  
Sbjct: 68  QVASFSLFGNVMSMASVQLTGASKDALLLSFKDAKLSVIEYDPGTHDLKTLSLHYFEEPE 127

Query: 112 GRPT--DNGQIGII--DPDCRLIGLHLYDGLFKVIPFDN---------------KGQLKE 152
            R     N  I I+  DP+ R   + +Y     V+PF                 K     
Sbjct: 128 LRDGFFQNVHIPIVRVDPENRCAVMLIYGTKLVVLPFRKDTLSDEQEGGVGEGPKSSFLP 187

Query: 153 AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDF 202
           ++ I + EL      ++D+KFL+G  +PT+++L++ N+      A    T  +     + 
Sbjct: 188 SYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNI 247

Query: 203 VEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAF 245
           ++      WS +NL      ++ VP P+ GV++    +++Y +              N  
Sbjct: 248 MQKVHPVIWSLSNLPFDCTQVMAVPKPIGGVVVFAVNSLLYLNQSVPPYGVSLNSQTNGT 307

Query: 246 KAIPIRPSITKAYGRVDADGSRYLLGD------HAGLLHLL-VITHEKEKVTGLKIELLG 298
            + P+R    +    +D   S ++  D        G +++L +IT     V     +   
Sbjct: 308 TSFPLRVQ-EEVKITLDCCQSDFIAYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAA 366

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            + + + +  ++   +++GS  G+S L+K
Sbjct: 367 ASVLTTCMVTMEPGYLFLGSRLGNSLLLK 395



 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 41/172 (23%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 469 EVCDSILNIGPCANASMGEPAFLSEEFQSNPEPDLEIVVCSGYGKNGALSVLQRSIRPQV 528

Query: 391 QASVELQGIKGMWSLRS-----------------------STDDPFDT------FLVVSF 421
             + EL G   MW++ S                        T+ P +       FL++S 
Sbjct: 529 VTTFELPGCHDMWTVISGEDKKESEGGEKEADAEKKEEQDKTEPPLEDDAKKHGFLILSR 588

Query: 422 ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 472
              T IL      E+ E +  GF +Q  T+F  +   NQ ++QV+   +RL+
Sbjct: 589 EDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNQYIIQVSPMGLRLL 638


>gi|358415280|ref|XP_003583063.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Bos taurus]
          Length = 1490

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 1019 IDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1078

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1079 KVYAVATSTSTPCTRVPRMTGEEKEFETIERDERYVHPQQEAFCIQLISPVSWEAIPNAR 1138

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1139 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1197

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1198 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1252

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1253 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1312

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1313 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1366

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1367 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1426

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1427 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1472



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 62/326 (19%), Positives = 140/326 (42%), Gaps = 60/326 (18%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GDVSDRIG 112
            +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      ++ D   
Sbjct: 123 FFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFV 182

Query: 113 RPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FN 155
           +     ++ + DPD R   + +Y     V+PF       +++G + E            +
Sbjct: 183 QNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIID 241

Query: 156 IR-LEE--LQVLDIKFLYGCAKPTIVVLYQDN-----KDARHVKTYEVALKDKDFVEGP- 206
           +R L+E  L ++D++FL+G  +PT+++L++ N     K A    T  +     +  +   
Sbjct: 242 VRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGKVAVRQDTCSIVAISLNITQKVH 301

Query: 207 ---WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPI 250
              WS  +L       + VP P+ GV+I    +++Y +                  A P+
Sbjct: 302 PVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPL 361

Query: 251 RPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETS 301
           R   T+   R+  D +        + ++    G +++L +IT     V     +    + 
Sbjct: 362 R---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASV 418

Query: 302 IASTISYLDNAVVYIGSSYGDSQLIK 327
           + +++  ++   +++GS  G+S L+K
Sbjct: 419 LTTSMVTMEPGYLFLGSRLGNSLLLK 444


>gi|229335612|ref|NP_001108153.2| cleavage and polyadenylation specificity factor subunit 1 [Danio
            rerio]
          Length = 1449

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 207/474 (43%), Gaps = 62/474 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 978  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1037

Query: 725  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFI--ST 759
            + +A+C+   + C        EE E   +                +L+   ++E I  + 
Sbjct: 1038 KVYAVCTSVKEPCTRIPRMTGEEKEFETIERDERYIHPQQDKFSIQLISPVSWEAIPNTR 1097

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + +      V     Y  +GT  +  EE    +GRIL+      + E
Sbjct: 1098 VDLEEWEHVTCMKTVALKSQETVSGLKGYVALGTCLMQGEEVT-CRGRILILDVIEVVPE 1156

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   +G L++AI QKI L  W L+D+    + +   
Sbjct: 1157 PGQPLTKNKFKVLYEKEQKGPVTALCHCSGFLVSAIGQKIFL--WSLKDNDLTGM-AFID 1213

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
               +I  +Y  +  +FI+  D+MKSISLL Y+ E   +   +RD     + ++E + D+ 
Sbjct: 1214 TQLYIHQMY--SIKNFILAADVMKSISLLRYQPESKTLSLVSRDAKPLEVYSIEFMVDNN 1271

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++++G  VN F        L  ++ 
Sbjct: 1272 QLGFLVSDRDKNLMVYMYLPEAKESFGGMRLLRRADFNVGSHVNAFWRMPCRGTLDTANK 1331

Query: 981  GQIP-----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
              +         F T++G +G++  +  + Y  L  LQ  L  ++    GLN + +R  +
Sbjct: 1332 KALTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPKAFRMLH 1391

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +++T+    KN LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1392 CDRRTLQNAVKNILDGELLNKYLYLSTMERSELAKKIGTTPDIILDDLLEIERV 1445



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 118/631 (18%), Positives = 238/631 (37%), Gaps = 166/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT------------------PQGLQ 51
           AH PT V  +   NF S QE NL++A  +++ ++ +                    + L+
Sbjct: 8   AHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGKSRKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    +  
Sbjct: 68  QVASFSLFGNVMSMASVQLVGTNRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 112 GRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF---------------DNKGQLKE 152
            R     N  I ++  DP+ R   + +Y     V+PF                 K     
Sbjct: 128 LRDGFVQNVHIPMVRVDPENRCAVMLVYGTCLVVLPFRKDTLADEQEGIVGEGQKSSFLP 187

Query: 153 AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDF 202
           ++ I + EL      ++D+KFL+G  +PT+++L++ N+      A    T  +     + 
Sbjct: 188 SYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNI 247

Query: 203 VEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAF 245
           ++      WS +NL    + ++ VP P+ GV++    +++Y +              N  
Sbjct: 248 MQKVHPVIWSLSNLPFDCNQVMAVPKPIGGVVVFAVNSLLYLNQSVPPFGVSLNSLTNGT 307

Query: 246 KAIPIRPSITKAYGRVDADGSRYLLGD------HAGLLHLL-VITHEKEKVTGLKIELLG 298
            A P+RP   +    +D   + ++  D        G +++L +IT     V     +   
Sbjct: 308 TAFPLRPQ-EEVKITLDCSQASFITSDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAA 366

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIKLN------------------LQPDAKGSYV- 339
            + + + +  ++   +++GS  G+S L++                     QP  K   V 
Sbjct: 367 ASVLTTCMMTMEPGYLFLGSRLGNSLLLRYTEKLQETPMEEGKENEEKEKQPPNKKKRVD 426

Query: 340 -------------------------------------EVLERYVNLGPIVDFCVVD---L 359
                                                EV +  +N+GP     + +   L
Sbjct: 427 SNWAGCPGKGNLPDELDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCASASMGEPAFL 486

Query: 360 ERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPF 413
             + Q       +VV CSG  K+G+L +++  I      + EL G   MW++    + P 
Sbjct: 487 SEEFQTNPEPDLEVVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCHDMWTVIYCEEKPE 546

Query: 414 DT--------------------------FLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                                       FL++S    T IL      E+ E +  GF +Q
Sbjct: 547 KPSAEGDGESPEEEKREPTIEDDKKKHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 604

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T++  +   N+ ++QV+   +RL+   ++
Sbjct: 605 GPTVYAGNIGDNKYIIQVSPMGIRLLEGVNQ 635


>gi|71028348|ref|XP_763817.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350771|gb|EAN31534.1| hypothetical protein TP04_0182 [Theileria parva]
          Length = 1231

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 183/402 (45%), Gaps = 47/402 (11%)

Query: 269 LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           LL    G L+ + ++H+   V+ + +       +AST+  L +  +++GS  GD +L + 
Sbjct: 304 LLLSEYGDLYKIELSHDDTTVSEIVVRYFDTVDVASTMCILRSGYLFVGSESGDHKLYQF 363

Query: 329 -------------NLQPDAKGSYV----------EVLERYVNLGPIVDFCVVDLERQGQG 365
                        +L PDAK + +           V++R  ++   VD  VVD+      
Sbjct: 364 TALENGDKDVICTSLHPDAKNAIIAFKPRKLQNLAVVDRMNSMALAVDMKVVDVLGLNNY 423

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISE 424
            +    G + D  L+ +R G    E A  EL G  K +++++ S +  +D ++++SF   
Sbjct: 424 DIFVACGRWYDSRLKCLRYGFNTEELAFNELPGRPKAVFTIK-SLESNYDEYIIISFQGN 482

Query: 425 TRILAMNLEDELEETEIEGFCSQTQTLF-CHDAIYNQ------LVQVTSGSVRLVSSTSR 477
           T +L++   + +EE     F +   TL  CH    +        VQV  G  R ++    
Sbjct: 483 TLVLSIG--EAVEEVTDSFFLTSITTLHSCHMGSTSGSVGGGIFVQVHDGGFRYLTG--- 537

Query: 478 ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI---LTEVKHAQLEYEISC 534
           ++  EWK      V +A  N +Q++L   GG ++Y ++ +     L EV    L  E++C
Sbjct: 538 DVVKEWKVQTTKRVKLADNNNTQLVLVLTGGEVIYFQLTEADVLELVEVGRRNLSTEVTC 597

Query: 535 LDI-NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFE 591
           L + + +  N   ++    G   +I VR+  L   L L + + LG   +P SV LL    
Sbjct: 598 LAVQHQVSGNK--AEFCCCGSIDNI-VRVMKLDKTLKLCSSQILGNNSLPESVALLTTSV 654

Query: 592 GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
              YL   L +G L+   +++  G L+D++   LG +P+ L+
Sbjct: 655 DELYLYVGLNNGVLIRNTVDV-AGNLSDQESRFLGAKPLRLK 695



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 34/283 (12%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLY----KWMLRDDGTRELQSECGHHGH 867
            ++L+    TKG +   N +  KLL  AI  K+++Y    K ML     R L S    +G 
Sbjct: 967  IKLLHVTNTKGWIRCFNNYENKLLLCAIGSKLRMYALGRKQMLLKGEHRSLTS----NGF 1022

Query: 868  ILALYVQTRGDFIVVGDLMKSISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
               + ++  G  I  GD+ +S+ LL    Y  + G  E         W+S +E+LD    
Sbjct: 1023 ---MDIKVVGSRIYCGDIRESVQLLRLKFYGEDLGEFELTTTSTGPRWLSTMELLDYSTV 1079

Query: 925  LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 984
            +  +   +LF  R       +E+  R     EYH     N+F  G +V  L    +  I 
Sbjct: 1080 IAGDKFDSLFVSRV----PHNEDVVRSNYF-EYH-----NQFHLGDIVTSLQRVRINPIH 1129

Query: 985  T--VIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
            +  V++ T+ G IGV+     +  L FL+ L+  L   I  V G   + +RS+       
Sbjct: 1130 SEVVLYTTLMGSIGVLIPFVSKDELDFLQHLEMLLCNQIDTVTGREVQMFRSY-----YF 1184

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              +N +DGDL E F  L   + + ++  +N+ V E+ K+++ +
Sbjct: 1185 PVQNIVDGDLCEMFTALGDEKFN-VANQLNLKVAEVVKKLKNI 1226



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 5/149 (3%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT VT S  G+F++P+    ++A+   +E++ L   G LQ ++ V  +G +  
Sbjct: 5   YNLTLKKPTGVTASVPGSFSAPKAQEFVVARAHVLELYGLNASGKLQQLVSVEAFGIVRA 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           L  FR  G  +D+L + ++  +  +L++  +++    R   +   + G R    GQ   +
Sbjct: 65  LAAFRLTGAQRDYLVVTSDSGRIVILEYSTQTNSF-KRLHCETYGKTGVRRIVPGQYLAV 123

Query: 124 DPDCR--LIGLHLYDGLFKVIPFDNKGQL 150
           DP  R  +IG         ++  D+K  L
Sbjct: 124 DPKGRALMIGAVERQKFVYILNRDSKANL 152


>gi|307190910|gb|EFN74734.1| Cleavage and polyadenylation specificity factor subunit 1 [Camponotus
            floridanus]
          Length = 1418

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 39/332 (11%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAF 831
            Y  +GT Y   E+   ++GRIL+F I+E            + + I  KE KG + ++   
Sbjct: 1093 YIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1151

Query: 832  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
            +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++        I++ D+ KS
Sbjct: 1152 SGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI-----KSLILIADVYKS 1203

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGA 943
            ISLL ++ E   +   +RD+    +  +E L D+  LG      E+N  LF  +  S  +
Sbjct: 1204 ISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFFLADGESNLALFMYQPESRES 1263

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TVIFGTVNGVIGV 997
               ++  L    ++HLG+ VN F      +  P +D  Q          ++ T++G +G 
Sbjct: 1264 LGGQK--LIRKADFHLGQKVNTFFRIRCRVSDPANDKKQFSGADKRHVTMYATLDGSLGY 1321

Query: 998  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN---EKKTVDAKNFLDGDLIES 1054
            I  +P + Y  L  LQ  L   I  + GLN + +R         +   A+  +DGDL+  
Sbjct: 1322 ILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKSYRQTYKSYIRNQGNPARGIIDGDLVWR 1381

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
            +L L      +++K +   V+E+ + + E+ R
Sbjct: 1382 YLFLPNNEKTDVAKKIGTRVQEIIEDITEIDR 1413



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/392 (20%), Positives = 159/392 (40%), Gaps = 73/392 (18%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-----------------QGLQP 52
            H  T V H+   +F +  E  L++A    I +  L P                   L+ 
Sbjct: 8   THPATGVEHAITCHFFNRTEKCLVVAGANVIRVFRLIPDIDMTRREKYTENRPPKMKLEC 67

Query: 53  MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG 112
           +    ++G I +++     G  +D L ++    K  V+++D +  +L T ++    +   
Sbjct: 68  LAQYTLHGNIMSMQAVHLIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEEI 127

Query: 113 RP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF-------------------DNKGQ 149
           +   T++  I I+  DP+ R   + +Y     V+PF                    NK  
Sbjct: 128 KDGWTNHHHIPIVRVDPEGRCAIMLIYGRKLVVLPFRKDPSLDDGDLLDSAKLTSSNKTP 187

Query: 150 LKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYEVALK 198
           +  ++ I L+ L+     V+D++FLYG  +PT+++LY+  +        R      VA+ 
Sbjct: 188 ILSSYMIVLKTLEEKMDNVIDLQFLYGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAIS 247

Query: 199 ---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------A 242
               +      WS +NL      ++PV  PL G LI+   +++Y +             A
Sbjct: 248 LNIQQRVHPIIWSVSNLPFDCYQVVPVKKPLGGTLIMAVNSLIYLNQSIPPYGVSLNSLA 307

Query: 243 NAFKAIPIRP----SITKAYGRVD-ADGSRYLLGDHAGLLHLL-VITHEKEKVTGLKIEL 296
           +     P++P     ++    +V    G R ++   +G L++L +       V G   + 
Sbjct: 308 DTSTNFPLKPQEGVKMSLEGSQVAFISGDRLVISLKSGELYVLSLFADSMRSVRGFHFDK 367

Query: 297 LGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
              + + S +   ++  +++GS  G+S L++ 
Sbjct: 368 AAASVLTSCVCMCEDNYLFLGSRLGNSLLLRF 399



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 416
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 506 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGTLNNDEQVKAEAEGSHAF 565

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 472
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 566 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 620


>gi|84996279|ref|XP_952861.1| splicing factor 3b subunit [Theileria annulata strain Ankara]
 gi|65303859|emb|CAI76236.1| splicing factor 3b subunit, putative [Theileria annulata]
          Length = 1340

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 184/429 (42%), Gaps = 75/429 (17%)

Query: 269 LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           LL    G L+ + ++H+   V+ + I       +  ++  L +  ++IGS  GD +L + 
Sbjct: 357 LLLSEYGDLYKIELSHDDNTVSEVVIRYFDTVDVGISMCILRSGYLFIGSESGDHKLYQF 416

Query: 329 -------------NLQPDAKGSYVE----------VLERYVNLGPIVDFCVVDLERQGQG 365
                        +L PDAK + +           V++R  ++G +VD  V D+      
Sbjct: 417 TSLDNGDKDVICTSLHPDAKNAIIAFKPRVLQNLVVVDRMSSMGLVVDMKVADVMGLNNY 476

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISE 424
            +    G + +  L+ +R G    E A  EL G  K +++++ S +  FD ++++SF   
Sbjct: 477 DIFVACGRWYNSRLKCLRYGFNTEELAFNELPGRPKHVFTIK-SLESNFDEYIIISFQGN 535

Query: 425 TRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL----------------------- 461
           T +L++   + +EE     F +   TL C    Y                          
Sbjct: 536 TLVLSIG--EAVEEVTDSFFLTSITTLHCCYMSYRNGVSSSGVGGVSGVSGVGTVTNGVP 593

Query: 462 ------------VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 509
                       VQ+  G  R +S    ++  EWK      V +A  N +Q++L   GG 
Sbjct: 594 VTGGTGITRGIYVQIHDGGYRYLSG---DIIKEWKVQSTKRVKLADNNDTQLILVLTGGE 650

Query: 510 LVYLEIGDG---ILTEVKHAQLEYEISCLDI-NPIGENPSYSQIAAVGMWTDISVRIFSL 565
           ++Y ++ D     L EV    L  EI+CL I +P   + + ++    G   +I VRI  L
Sbjct: 651 IIYFQLTDTEVPELVEVGRRNLSTEITCLAIQHP--NSGTKAEFCCCGSIDNI-VRIMKL 707

Query: 566 -PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 624
             +L L + + LG   +P SV L   + I YL   L +G L+   L+M  G L D++   
Sbjct: 708 DKNLKLCSSQILGNNSLPESVTLLTNDEI-YLYVGLNNGVLIRNTLDM-IGNLIDQESRF 765

Query: 625 LGTQPITLR 633
           +GT+P+ L+
Sbjct: 766 MGTKPLKLK 774



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 161/381 (42%), Gaps = 47/381 (12%)

Query: 727  FAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCV 786
            F +  LKN           +R+++    E I+       E   +  +C    +S     V
Sbjct: 979  FEVMELKNYRAGVGKWSSCIRIINPINLETIAKLLFTENEAATTAYTCIL--NSIQLLIV 1036

Query: 787  GT---AYVLP---EENEPTKGRILVF--------IVEDGKLQLIAEKETKGAVYSLNAFN 832
            GT   A++ P   + N+  +  I V+        +V    ++L+    TKG +   N + 
Sbjct: 1037 GTIKNAHLYPTHMDVNDEVESCIRVYEYDSNYNNLVNGFNIKLLHITNTKGWIRCFNNYE 1096

Query: 833  GKLL-AAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 887
             KLL  AI  K+++Y    K ML     R L S    HG    + ++  G  I  GD+ +
Sbjct: 1097 NKLLLCAIGSKLRMYSLGKKQMLLKGEHRSLTS----HGF---MDIKVIGSRIYCGDIRE 1149

Query: 888  SISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
            S+ LL    Y  + G  E         W+S++E+LD    + A + F+   V +      
Sbjct: 1150 SVQLLRIKFYGEDLGEFELTTTSTGPRWLSSMELLDYSTVI-AGDKFDSIFVSRVPHNED 1208

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 1004
                   E   ++HLG+ V  F+   + +    S+V     V++ T+ G IGV+     +
Sbjct: 1209 VVRSNYFEYHNQFHLGDIVTSFQR--VRINPIHSEV-----VLYTTLMGSIGVLVPFVSK 1261

Query: 1005 QYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
              L FL+ L+  +   I  V G   + +RS+         +N +DGDL E ++ L     
Sbjct: 1262 DELDFLQHLEMLMCNQIDTVTGREVQMFRSY-----YFPVQNIVDGDLCEMYMTLDDKY- 1315

Query: 1064 DEISKTMNVSVEELCKRVEEL 1084
              I+  +N+ V E+ K+++ +
Sbjct: 1316 -NIANQLNLKVNEIIKKLKNI 1335



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT VT S  G+F++P+    ++A+   +E++ L   G LQ ++ V  +G +  
Sbjct: 5   YNLTLKKPTGVTASVQGSFSAPKAQEFVVARSHILELYSLNSLGKLQQLVSVEAFGIVRA 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           L  FR  G  +D+L + ++  +  +L++  +++    R   +   + G R    GQ   +
Sbjct: 65  LAAFRLTGALKDYLAVTSDSGRLVILEYSTQTNSF-KRIHSETYGKTGVRRIVPGQYLAV 123

Query: 124 DPDCRLI 130
           DP  R I
Sbjct: 124 DPKGRAI 130


>gi|440904368|gb|ELR54893.1| Cleavage and polyadenylation specificity factor subunit 1, partial
            [Bos grunniens mutus]
          Length = 1417

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 963  IDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1022

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1023 KVYAVATSTSTPCTRVPRMTGEEKEFETIERDERYVHPQQEAFCIQLISPVSWEAIPNAR 1082

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1083 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1141

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1142 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1196

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1197 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1256

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1257 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1310

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1311 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1370

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1371 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSPMERGELAKKIGTT 1416



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 74/392 (18%), Positives = 161/392 (41%), Gaps = 85/392 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIA------------------KCTRIEIHLLTPQGLQ 51
           AH PT +  S   NF +  E NL++                   + T  + H    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVGPSQFFPSSSLLQAPTKNDRSTDGKAHREHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++       V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLS-------VVEYDPGTHDLKTLSLHYFEEPE 120

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 121 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 179

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 180 PSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 239

Query: 202 FVEG--P--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +   P  WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 240 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 299

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 300 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 356

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
               + + +++  ++   +++GS  G+S L+K
Sbjct: 357 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK 388


>gi|27807297|ref|NP_777145.1| cleavage and polyadenylation specificity factor subunit 1 [Bos
            taurus]
 gi|1706101|sp|Q10569.1|CPSF1_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit
 gi|929007|emb|CAA58152.1| cleavage and polyadenylation specificity factor, 160 kDa subunit [Bos
            taurus]
 gi|296480730|tpg|DAA22845.1| TPA: cleavage and polyadenylation specificity factor subunit 1 [Bos
            taurus]
          Length = 1444

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 973  IDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1032

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1033 KVYAVATSTSTPCTRVPRMTGEEKEFETIERDERYVHPQQEAFCIQLISPVSWEAIPNAR 1092

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1151

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1206

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1207 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1266

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1267 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1320

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1321 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1380

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1381 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1426



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/395 (18%), Positives = 163/395 (41%), Gaps = 81/395 (20%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQP----------------- 52
           AH PT +  S   NF +  E NL++A  +++ ++ L      P                 
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDSEAPTKNDRSTDGKAHREHRE 67

Query: 53  ----MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM---- 104
               +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    
Sbjct: 68  KLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFE 127

Query: 105 -GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA--- 153
             ++ D   +     ++ + DPD R   + +Y     V+PF       +++G + E    
Sbjct: 128 EPELRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRS 186

Query: 154 -------FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALK 198
                   ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +   
Sbjct: 187 SFLPSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAI 246

Query: 199 DKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS------------- 241
             +  +      WS  +L       + VP P+ GV+I    +++Y +             
Sbjct: 247 SLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSL 306

Query: 242 ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGL 292
                A P+R   T+   R+  D +        + ++    G +++L +IT     V   
Sbjct: 307 TTGTTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAF 363

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
             +    + + +++  ++   +++GS  G+S L+K
Sbjct: 364 HFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK 398


>gi|348555854|ref|XP_003463738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 1 [Cavia porcellus]
          Length = 1440

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 969  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1028

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1029 KVYAVATSTSTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1088

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1089 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1147

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1148 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1202

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1203 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1262

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1263 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1316

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1317 TEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1376

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1377 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1422



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 96/495 (19%), Positives = 188/495 (37%), Gaps = 145/495 (29%)

Query: 123 IDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FNIR-LEE--LQ 162
           +DPD R   + +Y     V+PF       +++G + E            ++R L+E  L 
Sbjct: 142 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 201

Query: 163 VLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEGP----WSQNNLD 213
           ++D++FL+G  +PT+++L++ N+      A    T  +     +  +      WS  +L 
Sbjct: 202 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 261

Query: 214 NGADLLIPVPPPLCGVLIIGEETIVYCSAN-------------AFKAIPIRPSITKAYGR 260
                 + VP P+ GV+I    +++Y + +                A P+R   T+   R
Sbjct: 262 FDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTLGTTAFPLR---TQEGVR 318

Query: 261 VDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDN 311
           +  D +        + ++    G +++L +IT     V     +    + + +++  ++ 
Sbjct: 319 ITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEP 378

Query: 312 AVVYIGSSYGDSQLIKL--NLQ---------------PDAKGSYVE-------------- 340
             +++GS  G+S L+K    LQ               P +K   V+              
Sbjct: 379 GYLFLGSRLGNSLLLKYTEKLQEPPASTVREAADKEEPPSKKKRVDSTAGWAGSKTVPQD 438

Query: 341 ------------------------VLERYVNLGPIVDFCVVD---LERQGQG------QV 367
                                   V +  +N+GP  +  V +   L  + Q       ++
Sbjct: 439 EVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEI 498

Query: 368 VTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL---------------------- 405
           V CSG  K+G+L +++  I      + EL G   MW++                      
Sbjct: 499 VVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAEGSEQEPS 558

Query: 406 --RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LV 462
              +  D     FL++S    T IL      E+ E +  GF +Q  T+F  +   N+ +V
Sbjct: 559 APEAEDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIV 616

Query: 463 QVTSGSVRLVSSTSR 477
           QV+   +RL+   ++
Sbjct: 617 QVSPLGIRLLEGVNQ 631


>gi|242021233|ref|XP_002431050.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
            putative [Pediculus humanus corporis]
 gi|212516279|gb|EEB18312.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
            putative [Pediculus humanus corporis]
          Length = 1409

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 194/438 (44%), Gaps = 66/438 (15%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE------ESEMHFVRLLDDQ------- 752
            +R +PL   P  + +  +S+T+ + +  ++   E      E + H V   DD+       
Sbjct: 978  VRKVPLRCTPHMVTYHLESKTYCLITSSSEPSNEYFRFNGEDKEHSVEDRDDRFPLPLQD 1037

Query: 753  TFEFISTYP------------LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEE 795
             F  +   P            LD +E+   + + + S +        Y  VGT Y    E
Sbjct: 1038 KFSIVLFSPVSWEVIPNTKMELDEWEHVTCVKTVNLSYEGTRSGLKGYVAVGTNYNY-SE 1096

Query: 796  NEPTKGRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  +KGRIL++ I+E            + + +  KE KG V +L    G L+ A+ QKI 
Sbjct: 1097 DITSKGRILIYDIIEVVPEPGQPLTKNRFKTVYAKEQKGPVTALCHVLGFLVTAMGQKI- 1155

Query: 845  LYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
             Y W L+D+   G   + ++   H  I      +    I+V D+ KSISLL ++ E   +
Sbjct: 1156 -YIWQLKDNDLVGIAFIDTQIYIHQMI------SVKSLILVADVYKSISLLRFQEEYRTL 1208

Query: 902  EERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
               +RD+    + A+E+L D+  +G   ++   N+       E        +L    ++H
Sbjct: 1209 SLVSRDFRPCEVYAIELLLDNTQMGFLISDVEMNIIMYMYKPEDRDSVGGQKLLRKADFH 1268

Query: 959  LGEFVN-----RFRHGSLVMRLPDSDVG--QIPTVIFGTVNGVIGVIASLPHEQYLFLEK 1011
            LG+ +N     R R G       D  +G  +    +F T++G +G +  +P + Y  L+ 
Sbjct: 1269 LGQHINSWFRIRCRLGDQAENY-DFPIGAEKRHISMFATLDGALGYLLPIPEKTYRRLQM 1327

Query: 1012 LQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKT 1069
            LQ  L   I  + GLN + +R + + +K +    K  +DG+LI  +L L+     +++K 
Sbjct: 1328 LQNILVYHIPHLAGLNPKAFRIYKSGRKLLGNPCKRIVDGELIWMYLSLTVMEKQDVAKK 1387

Query: 1070 MNVSVEELCKRVEELTRL 1087
            M   ++++ + +  + RL
Sbjct: 1388 MGSKMDDIIEDIAVIERL 1405



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 141/673 (20%), Positives = 255/673 (37%), Gaps = 164/673 (24%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-----------------QGLQP 52
            H  T+V H+   +F +  E +L++A    + +  L P                   L+ 
Sbjct: 8   THPATSVEHAISCHFYNRSETSLVVAGKNILRVFQLIPDIDPTKRDAYTERRPPKMKLEC 67

Query: 53  MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG--DVSDR 110
           +    ++  + +++     G ++D L ++    K CV+++D +S +L T ++   +  D 
Sbjct: 68  LSSFSLFANVMSMQAVSLAGSSRDALLLSFREAKLCVVEYDPDSHDLRTLSLHYFEEEDM 127

Query: 111 IGRPTDNGQIGII--DPDCRLIGLHLYDGLFKVIPFDNKGQLKE---------------- 152
            G  T++  I  +  DP+ R   + +Y     ++PF  + +L +                
Sbjct: 128 KGGWTNHYDIPYVRVDPEGRCAAMLVYGRKLVILPFRRESKLDDPDIALLDPHSSSVATA 187

Query: 153 ------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD--------ARHVKTY 193
                 ++ I L E+      V+DI+FLYG  +PT+++LY+  K         +      
Sbjct: 188 KAPVLSSYTITLREIDEKLENVIDIQFLYGYYEPTLLILYEPLKTFAGRIAVRSDTCAMI 247

Query: 194 EVALKDKDFVEGP-WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY---------CSAN 243
            V+L  +  V    WS  NL       IPVP PL G LI     ++Y          S N
Sbjct: 248 AVSLNIQQRVHPAIWSVGNLPFNCTQAIPVPKPLGGTLIFSVNALIYLNQSIPPFGVSVN 307

Query: 244 AFKAIPIRPSITKAYG-RVDADGS--------RYLLGDHAGLLHLLVITHEK-EKVTGLK 293
           +         +    G ++  +GS        R +L    G L++L +  +    V G  
Sbjct: 308 SIAENSTNFQLKIQEGVKITLEGSQATFISHDRLVLSLKTGELYVLSLLADNIRSVRGFH 367

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN------------------------ 329
            +    + + + +   ++  +++GS  G+S L++                          
Sbjct: 368 FDKAAASVLTTCLCVCEDKYLFLGSRLGNSLLLRFTEKESSEAPIITLDESIREVPVPSK 427

Query: 330 -LQPDAKGSYV--------------------------------EVLERYVNLGPIVDFCV 356
             + DA G ++                                EV +  +N+GP  +  +
Sbjct: 428 RRRQDALGDWMASDVADIRDLDELEVYGTQEASSSVQITSFMFEVCDSLLNIGPCGNVSM 487

Query: 357 VDL---------ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-- 405
            +           R    ++VT SG  K+G++ +++  I      + EL G   MW++  
Sbjct: 488 GEPAFLSEEFSNNRDPDLELVTTSGHGKNGAICVLQRTIRPQVVTTFELPGCLDMWTVIG 547

Query: 406 -------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 458
                    + DD    FL++S    T IL      E+ E +  GF +Q  T+F  +   
Sbjct: 548 PQSDSGPTQAEDDISHAFLILSQKDSTMILQTG--QEINEVDHSGFNTQGPTIFAGNLAS 605

Query: 459 NQ-LVQVTSGSVRLVSSTSRELRNEWKSP--PGYSVNVATANASQVLLATGGGHLVYLEI 515
           N+ +VQV+   VRL+    R L      P   G SV  A+     V L T  G +V L +
Sbjct: 606 NKYIVQVSKAGVRLL----RGLEQIQHIPLDLGSSVVHASTADPYVALLTEDGQVVLLTL 661

Query: 516 ----GDGILTEVK 524
               G G L+  K
Sbjct: 662 RESRGQGRLSVFK 674


>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
          Length = 1219

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 248/1226 (20%), Positives = 489/1226 (39%), Gaps = 194/1226 (15%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNF-----TSPQELNLIIAKCTRIEIHLLTPQG--LQPML 54
            S++ Y +T   P+    S VG F     ++     L++   T +++  +  +   L+   
Sbjct: 39   SVYLYNLTLKPPSYYISSIVGQFYKQDNSTKNAQQLVLVSSTTLQLFEINEEAGKLELQS 98

Query: 55   DVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRP 114
               + G I ++E  +      D + I ++     +LQ+D ++ + I++    ++      
Sbjct: 99   SQNLLGIINSIE--KICLSEVDGVVITSDSGNLSILQYDNKTKKFISKIQEPMTKNGWGR 156

Query: 115  TDNGQIGIIDPD--CRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKF---- 168
               G+   IDP+  C L+     + LF  I  ++ G  + +  +     QVL +K     
Sbjct: 157  NYVGENLAIDPENRCILVAAMEKNKLFYKIESNSSGSKELSSPLEAHSKQVLCLKIVALN 216

Query: 169  ------LYGC-----AKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNN--LDNG 215
                  L+G       K  I+  Y+ ++   HV      +K K     P S N+  L N 
Sbjct: 217  TDHNNPLFGALELTPEKKCIINYYELDQGLNHV------VKKK-----PNSSNSDPLPND 265

Query: 216  ADLLIPVPPPLCGVLIIGEETIVYCSANA---FKAIPIRPSITKAYGRVD-----ADGSR 267
             + LIP+P  + G+++ G     Y   +    +  +P R   T+    V+         +
Sbjct: 266  VNYLIPLPGHIGGMVVCGTNWCFYDKLDGPRIYLPLPRRNGQTQDSIIVNHVTHVLKKKK 325

Query: 268  Y--LLGDHAGLLHLLVITHE--KEKVTGLKIELLGETSIASTISYLDNAVVY-------- 315
            +  LL +  G L  L + ++  KE +  + I        A +++   N  ++        
Sbjct: 326  FFILLQNALGDLFKLTVDYDFDKEIIKNISITYFDTIPPALSLNIFKNGFLFANVLNNDK 385

Query: 316  -------IGSSYGDSQLI-------KLNLQPDAKGSY----------VEVLERYVNLGPI 351
                   +G    + +L+        LN   ++  S+          ++VLE    L PI
Sbjct: 386  LLYQFEKLGDDLTEGELVINSSDYESLNSVRESVTSFKLKGLDNLALIDVLE---TLSPI 442

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ-GIKGMWSLRSSTD 410
             D  ++D       ++VT S       ++ + +G+         L      +++ + S +
Sbjct: 443  TDSKIID------SKLVTLSSH---SYVKSITHGVPTTTLVESPLPITPTDIFTTKLSLE 493

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
               D +LV+S    ++ L +++ + +E+ E   F     T+         +VQ+ S  ++
Sbjct: 494  SANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASVVQIYSNGIK 553

Query: 471  LVSSTSRELRN-EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLE 529
             V + +   +  +W  P G ++  AT N  QVL+A     +VY EI D    ++   Q  
Sbjct: 554  HVRTVNGNKKTTDWFPPAGITITHATTNNQQVLIALSNLSVVYFEI-DATDDQLIEYQDR 612

Query: 530  YEI-SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRS 584
             EI + +    I EN S     A+   +D ++++ SL + N +  + L          + 
Sbjct: 613  LEIATTITAMAIQENISEKSPFAIIGCSDETIQVVSLQEHNCLEIKSLQALSANSSSLKM 672

Query: 585  VLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-V 643
            +     E  +++   + +G      ++   G L++ +   +G++P++L      N    +
Sbjct: 673  LKSSGKE--THVHIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLSVIKFSNEIEGI 730

Query: 644  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP-DSLAIAKEGELTIGTI---- 698
             A S  P + Y        + +   ++++   F S     + +   K+  L I ++    
Sbjct: 731  LAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDNNLIIFSVGKED 790

Query: 699  ---DDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-----------CSLKNQSCAEESEMH 744
               D  Q L I +  L   PR++     +R F             C++         E +
Sbjct: 791  SVFDPSQDLTIATTKLRYTPRKMI-TNGNRLFISESEYNVQGPFKCNINGDVKENVDEDY 849

Query: 745  F---------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-----VYY 784
            +               ++++D ++ + I +  LD  E   S+ + SF+  S       + 
Sbjct: 850  YEAFGYEWKQNSWASCIQVVDSKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPASHL 909

Query: 785  CVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             VG      +LP  N   K  +  F +    LQL+ + E       L  F  KLL A   
Sbjct: 910  VVGVCTNQTILP--NSYDKSYLYTFKIGKKHLQLVHKTELDHIPQVLENFQDKLLVASGN 967

Query: 842  KIQLYKWMLRDDGTRELQSEC----GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
             I+LY     D G ++L  +         +I  +  QT  + I++ D  KS S++  K +
Sbjct: 968  HIRLY-----DIGQKQLLKKSTTIIDFSTNINKIIPQT--NRIIICDSHKS-SIVFAKFD 1019

Query: 898  EGAIE--ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR----------------KN 939
            E   +    A D     ++++  LD D  +G +   N+F  R                K 
Sbjct: 1020 ESQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTILKT 1079

Query: 940  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 999
             +G  +    +L+ + E+H+G+ +  F  G L       ++    +VI+  + G IG++ 
Sbjct: 1080 QDGILNSCPYKLQNLIEFHIGDIITSFNLGCL-------NLAGTESVIYTGLQGTIGLLI 1132

Query: 1000 SLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
             L  +  +  L  LQ  +++    + G +H + RS+ N       KN +DGDL+E FL+ 
Sbjct: 1133 PLVSKSEVELLFNLQLYMQQSQNNLVGKDHLKLRSYYNP-----IKNVIDGDLLERFLEF 1187

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL 1084
              +   EIS+ +N SV ++ K++ +L
Sbjct: 1188 DISLKIEISRKLNKSVNDIEKKLIDL 1213


>gi|410911304|ref|XP_003969130.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Takifugu rubripes]
          Length = 1444

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 201/469 (42%), Gaps = 80/469 (17%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 973  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1032

Query: 725  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFISTYP 761
            + +A+C+   + C        EE E   +                +L+   ++E I    
Sbjct: 1033 KVYAVCTSLKELCTRIPRMTGEEKEYETIERDERYINPQQDKFSIQLISPVSWEAIPNTR 1092

Query: 762  LD--TFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
            +D   +EY   + + +      V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IDLEEWEYVTCMKTVALRSQETVSGLKGYIAAGTCLMQGEEVT-CRGRILILDVIEVVPE 1151

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQS 860
             G      K +++ EKE KG V +L   NG L++AI QKI L  W+L+D+   G   + +
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WVLKDNDLTGMAFIDT 1209

Query: 861  ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            +   H       + +  +FI+  DLMKS+SLL Y+ E   +   +RD     + ++E + 
Sbjct: 1210 QLHIHQ------MMSIKNFILAADLMKSVSLLRYQEESKTLSLVSRDAKPLEVYSIEFMV 1263

Query: 921  DDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 977
            D+  LG   ++ + NL+      E        RL    +++ G  +N F       R+P 
Sbjct: 1264 DNNQLGFLVSDRDKNLYVYMYLPEAKESFGGMRLLRRADFNAGANINTF------WRMPC 1317

Query: 978  S---DVGQIPTVI--------FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 1026
                + G    +         F T++G +G++  +  + Y  L  LQ  L  ++    GL
Sbjct: 1318 RGALEAGSRKAMTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLSHHAGL 1377

Query: 1027 NHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            N + +R  + +++++    KN LDG+L+  +L LS     E++K +  +
Sbjct: 1378 NPKAFRMLHCDRRSLQNPVKNILDGELLNKYLYLSMMERSELAKKIGTT 1426



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/388 (20%), Positives = 161/388 (41%), Gaps = 70/388 (18%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT------------------PQGLQ 51
           AH PT V  S   NF S +E NL++A  +++ ++ +                    + L+
Sbjct: 8   AHTPTAVEFSVYCNFISSKEKNLVVAGTSQLFVYRIIHDVESTSKTDKSSDSKTRKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G + ++E  +  G  +D L ++ +  K  V+++D  + +L T ++    +  
Sbjct: 68  QVAAFSLFGNVMSMESVQLVGANRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEELE 127

Query: 112 GRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPFDN---------------KGQLKE 152
            R     N  I I+  DP+ R   + +Y     V+PF                 K     
Sbjct: 128 LRDGFVQNVHIPIVRVDPENRCAVMLIYGTKLVVLPFRKDTLTDEQEVGVGEGPKSSFLP 187

Query: 153 AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDF 202
            + I + EL      ++D+KFL+G  +PT+++L++ N+      A    T  +     + 
Sbjct: 188 TYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNI 247

Query: 203 VEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAF 245
           ++      WS +NL      ++ VP P+ GV++    +++Y +              N  
Sbjct: 248 MQKVHPVIWSLSNLPFDCTQVMAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTNGT 307

Query: 246 KAIPIR----PSITKAYGRVDADG-SRYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGE 299
            A P+R      IT    + D     + ++    G +++L +IT     V     +    
Sbjct: 308 TAFPLRLQDEVKITLDCSQADFIAYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAA 367

Query: 300 TSIASTISYLDNAVVYIGSSYGDSQLIK 327
           + + + +  ++   +++GS  G+S L+K
Sbjct: 368 SVLTTCMVTMEPGYLFLGSRLGNSLLLK 395



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 35/171 (20%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + Q       +VV CSG  K+G+L +++  I    
Sbjct: 465 EVCDSILNIGPCANASMGEPAFLSEEFQSNPEPDLEVVVCSGHGKNGALSVLQRSIRPQV 524

Query: 391 QASVELQGIKGMWSL-----------------RSSTDDPFDT------FLVVSFISETRI 427
             + EL G   MW++                 +  T+ P +       FL++S    T I
Sbjct: 525 VTTFELPGCHDMWTVISNEPVQKEQEETEREGKEKTEPPAEEDTKKHGFLILSREDSTMI 584

Query: 428 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           L      E+ E +  GF +Q  T+F  +   N+ ++QV+   +RL+   ++
Sbjct: 585 LQTG--QEIMELDTSGFATQGPTVFAGNIGDNKYIIQVSPMGIRLLEGVTQ 633


>gi|195056749|ref|XP_001995154.1| GH22991 [Drosophila grimshawi]
 gi|193899360|gb|EDV98226.1| GH22991 [Drosophila grimshawi]
          Length = 1426

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 198/435 (45%), Gaps = 62/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-------AEESEM-------HFVR---- 747
            +R +PL   PR++ +  ++R + + + K +          E+ E+        F+     
Sbjct: 997  VRKVPLRCTPRQLVYHRENRVYCLITQKEEPMTKYYRFNGEDKELSEECRGERFIYPIGS 1056

Query: 748  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1057 LFEMVLISPETWEIVPDASIQFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1115

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1116 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVVGFLVTGLGQKI- 1174

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1175 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEHRTLSLA 1230

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   +  +L    +YHL
Sbjct: 1231 SRDFNPMEVFGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQ--KLLRKADYHL 1288

Query: 960  GEFVN-RFR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            G+ VN  FR       L  R P     +   VI+G+++G +G    LP + Y     LQ 
Sbjct: 1289 GQVVNTMFRVQCHQRGLHQRQPFLYENK-HLVIYGSLDGALGYCLPLPEKVYRRFLMLQN 1347

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
             L      + GLN +++R+  + KK     ++  +DGDLI SF  L+ +  +E++K +  
Sbjct: 1348 VLLSYQDHLCGLNPKEYRTIKSVKKLGINPSRCIIDGDLIWSFRMLAHSERNEVAKKIGT 1407

Query: 1073 SVEELCKRVEELTRL 1087
              EE+   + E+ R+
Sbjct: 1408 RTEEILADLLEIERI 1422



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 81/390 (20%), Positives = 151/390 (38%), Gaps = 97/390 (24%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP----------- 52
           H  T +  +    F +  E NL++A    ++++ + P       Q L P           
Sbjct: 9   HAATAIEFAISCRFFNNVEENLVVAGANVLKVYRIAPNVDAVQRQKLNPSEMRLAPKMRL 68

Query: 53  --MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDR 110
             +    +YG + +L+     G  +D L I+ +  K  VLQ DA++  L T ++    + 
Sbjct: 69  ECLASYTLYGNVMSLQSVSLAGAMRDALLISFKDAKLSVLQLDADTQTLKTLSLHYFEED 128

Query: 111 IGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE-------------- 152
             R    G+  +    +DPD R   + +Y     V+PF     L E              
Sbjct: 129 DIRGGWTGRYHVPVVRVDPDARCAIMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPT 188

Query: 153 ----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVAL 197
                     ++ I L +L      VLDI+FL+G  +PT+++LY+       V+T    +
Sbjct: 189 AMVTRTPIMASYLIALADLDEKLDNVLDIQFLHGYYEPTLLILYEP------VRTCAGRI 242

Query: 198 KDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------------CSANA 244
           K +               +D   P+  P+ G L++    ++Y              SA+ 
Sbjct: 243 KVR---------------SDTFFPIQKPIGGCLVMTVNAVIYLNQSVPPYGVSLNSSADN 287

Query: 245 FKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKEK-VTGLKIEL 296
             A P++P      S+  A +  +D D  + ++    G L++L +  +  + V       
Sbjct: 288 STAFPLKPQDNVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSMRTVRNFHFHK 345

Query: 297 LGETSIASTISYLDNAVVYIGSSYGDSQLI 326
              + + S I       +++GS  G+S L+
Sbjct: 346 AAASVLTSCICVCHTEYIFLGSRLGNSLLL 375



 Score = 41.2 bits (95), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 26/160 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 455 EVCDSLINVAPINYMCAGERVEFEEDGATLRPHADNLNDLKIELVAATGHSKNGALSVFV 514

Query: 384 NGIGINEQASVELQGIKGMWSL-----RSSTDDPFDT--FLVVSFISETRILAMNLEDEL 436
           N I      S EL+G   +W++     R +T    D   F+++S  S T +L      E+
Sbjct: 515 NCINPQIITSFELEGCLDVWTVFDDATRKATTARQDQHDFMLLSQRSSTLVLQTG--QEI 572

Query: 437 EETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
            E E  GF     T++  +    + +VQVT+  VRL+  T
Sbjct: 573 NEIENTGFTVNQPTIYVGNLGQQRFIVQVTTRHVRLLQGT 612


>gi|196012166|ref|XP_002115946.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
 gi|190581722|gb|EDV21798.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
          Length = 1187

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 152/634 (23%), Positives = 258/634 (40%), Gaps = 121/634 (19%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEI---------------------HLLTPQ 48
           ++ PT V H    +F S   LNL+ A  T I +                     HL    
Sbjct: 8   SYPPTAVNHCLACHFYSSDRLNLLTAGPTCIRVYDIIKDQEDIDLDNRSDNADNHLNKDN 67

Query: 49  GLQPMLDV----PIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM 104
            L P L+       YG+I  +E  R     +D LFI     K  ++++DA++S L T ++
Sbjct: 68  KLHPELEFLASYSFYGKIYGIESVRFRHHHRDSLFICFADAKLSLVEYDADNSNLTTLSL 127

Query: 105 GDVSDRIGRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPFDNKGQ----------- 149
               D   +   + N  I II  DPD R   + + +    ++PF ++G            
Sbjct: 128 HTFEDDELKNGFSRNLSIPIIRVDPDNRCAAMVVSNVHLAILPFRHRGPAEQQVQIDPKN 187

Query: 150 ------LKEAFNIRLEEL------QVLDIKFLYGCAKPTIVVL------YQDNKDARH-- 189
                 L  ++ + + +L      +++DI+FL G  +PTI++L      +      R   
Sbjct: 188 TSGKYPLMPSYVVDVRDLGNEKVSRLIDIRFLEGYYEPTILILCEILRTWSGRVAVRQDT 247

Query: 190 VKTYEVALKDKDFVEGP-WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAI 248
                V+L   D V    WS NNL       I VP P+ GVLI     +++ + +     
Sbjct: 248 CSILAVSLNTIDKVHPVIWSLNNLPFDCLGAITVPRPIGGVLIFAANCLLHLNQS----- 302

Query: 249 PIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISY 308
             +P   ++   +  + + + + D A L      T + ++ T  K+    E         
Sbjct: 303 --KPPYAESLNSITDESTTFPMHD-ADLAPNTPETQDTDEPTSKKLRTDDEKEDEELEKL 359

Query: 309 LDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL----ERQGQ 364
                 +   +  +S L         +    EV +R +++GP     +  +    + +  
Sbjct: 360 YS---AHTSCTAKESYL---------RSYTFEVCDRILHVGPCASIAIGQISTFVQEESD 407

Query: 365 GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWS-----LRSSTDDPFDT---- 415
            +VV CSG  K+G+L ++  GI     AS +L G   MW+     L    D  F+T    
Sbjct: 408 VEVVICSGHDKNGALSVLNKGIKPQVVASYDLPGCVDMWTVKDIRLNDENDGDFETENTH 467

Query: 416 -FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY-NQLVQVTSGSVRLVS 473
            FL++S  + T IL      E+ E E  GF +QT+T+F  +    N ++QVT   V LVS
Sbjct: 468 KFLIISRDNLTMILRTG--KEITEVEQLGFLTQTKTVFAGNLDNGNCIIQVTPYEVILVS 525

Query: 474 STSR----ELRNEWKSPPGYSVNVATANASQVLLATGGG-HLVYLEIGDGILTEVKHAQL 528
              +    EL NE  SP    V  +  +    LL  GG   ++  E+ D           
Sbjct: 526 KGEKIQQLELENE--SP---IVFCSLQDPYISLLLEGGSIMMLAFELSDN---------G 571

Query: 529 EYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 562
           E ++  ++  P+    ++S+IAA  ++ D + R+
Sbjct: 572 EKQVKLVNTTPL----NHSRIAACCLFQDNNGRM 601



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 185/470 (39%), Gaps = 111/470 (23%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDIQKLH------IRSIPLGEHPRRICHQE 722
            V    PFN A  P+  L    E +L I  +D  Q+        +  +PL      I H  
Sbjct: 772  VKCFAPFNIANCPNGFLYFNSEEDLRICVLD--QRFTYDCPWPVHKVPLRNTLHFITHHF 829

Query: 723  QSRTFAICSLKNQSC-------AEESEM-------HFV---------RLLDDQTFEFI-- 757
             ++T+ I S     C        E+ E         F+         +L+  +T+E I  
Sbjct: 830  VTKTYVIISSTMTVCEKMPHITTEDKEFIPVEKGDRFIHAPVEKFCLQLITSETWEIIPD 889

Query: 758  STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVFIV---- 808
            +   +  +E+   + S     +  V     +  VGT  V  EE    +GRI++F V    
Sbjct: 890  AEIQMAEWEHVTCLKSVKLKSEETVSGLKEFIAVGTTNVCGEE-VACRGRIVIFDVIEVV 948

Query: 809  -EDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
             E GK      ++   +KE KG V ++    G L+ +I QKI  Y W  RD+        
Sbjct: 949  PEPGKPLTKNKIKTYYDKEQKGPVTAITCVEGFLVTSIGQKI--YIWEFRDNKD------ 1000

Query: 862  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 921
                               ++G  M  I  LIY H       +   +N N+      L  
Sbjct: 1001 -------------------LIG--MAFIDTLIYIHSLD--RHQLEIFNTNFYVNKNQLG- 1036

Query: 922  DIYLGAENNFNLFTVRKN--SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
              ++  E++   F VR+     G+      R +V     L +  N  +H +         
Sbjct: 1037 --FVAPESHGGQFLVRRAEIQTGSNAHAFFRTKVRA---LNQRQNENKHITW-------- 1083

Query: 980  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
                    FGT++G IG++  +  ++Y  L  LQ  L   ++   GLN + +R+F + +K
Sbjct: 1084 --------FGTLDGSIGLLLPVDEKEYRRLFSLQAKLSIYLEQNAGLNQKAFRTFRSHQK 1135

Query: 1040 TV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +    +N LDGDL++ +  L      +++K +  + E++   + +LT+L
Sbjct: 1136 KLQNSMRNILDGDLLKRYFHLGFVERRDLAKQIMSTPEQI---INDLTKL 1182


>gi|195381337|ref|XP_002049409.1| GJ21566 [Drosophila virilis]
 gi|194144206|gb|EDW60602.1| GJ21566 [Drosophila virilis]
          Length = 1420

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 197/435 (45%), Gaps = 62/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLK-------------NQSCAEESE---------- 742
            +R +PL   PR++ +  ++R + + + K             ++  +EES           
Sbjct: 991  VRKVPLRCTPRQLVYHRENRVYCLITQKEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1050

Query: 743  MHFVRLLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
            +  + L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1051 LFEMVLISPETWEIVPDASIQFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1109

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1110 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVVGFLVTGLGQKI- 1168

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1169 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1224

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1225 SRDFNPLEVFGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1282

Query: 960  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            G+ VN  FR       L  R P     +   VI+GT++G +G    LP + Y     LQ 
Sbjct: 1283 GQVVNTMFRVQCHQRGLHHRQPFLYENK-HLVIYGTLDGALGYCLPLPEKVYRRFLMLQN 1341

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
             L      + GLN +++R+    KK     ++  +DGDLI S+  L+ +   E++K +  
Sbjct: 1342 VLLSYQDHLCGLNPKEYRTIKTVKKMGINPSRCIIDGDLIWSYRMLAHSERSEVAKKIGT 1401

Query: 1073 SVEELCKRVEELTRL 1087
              EE+   + E+ RL
Sbjct: 1402 RTEEILADMLEIERL 1416



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/390 (20%), Positives = 150/390 (38%), Gaps = 102/390 (26%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP----------- 52
           H  T+V  +    F +  E NL++A    ++++ + P       Q L P           
Sbjct: 9   HAATSVEFAITCRFFNNLEENLVVAGANVLKVYRIAPNVDAAQRQKLNPTEMRLAPKMRL 68

Query: 53  --MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDR 110
             +    +YG + +L+     G  +D L I+ +  K  VLQ DA++  L T ++    + 
Sbjct: 69  ECLASYSLYGNVMSLQSVSLAGGMRDALLISFKDAKLSVLQLDADTQALKTLSLHYFEEE 128

Query: 111 IGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE-------------- 152
             R    G+  +    +DPD R   + +Y     V+PF     L E              
Sbjct: 129 DIRGGWTGRYHVPVVRVDPDARCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPT 188

Query: 153 ----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVAL 197
                     ++ I L +L      VLDI+FL+G  +PT+++LY+       V+T    +
Sbjct: 189 AMVTRTPIMASYLIALADLDEKLDNVLDIQFLHGYYEPTLLILYEP------VRTCAGRI 242

Query: 198 KDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------------CSANA 244
           K                    + P+  P+ G L++    I+Y              SA+ 
Sbjct: 243 K--------------------VFPIQKPIGGCLVMTVNAIIYLNQSVPPYGVSLNSSADN 282

Query: 245 FKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKEK-VTGLKIEL 296
             + P++P      S+  A +  +D D  + ++    G L++L +  +  + V       
Sbjct: 283 STSFPLKPQDNVRLSLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSMRTVRNFHFHK 340

Query: 297 LGETSIASTISYLDNAVVYIGSSYGDSQLI 326
              + + S I       +++GS  G+S L+
Sbjct: 341 AAASVLTSCICVCHTEYIFLGSRLGNSLLL 370


>gi|380014171|ref|XP_003691113.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Apis florea]
          Length = 1583

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 229/516 (44%), Gaps = 80/516 (15%)

Query: 627  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 683
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 897  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 956

Query: 684  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 733
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1016

Query: 734  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 773
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1017 SYYRFNGEDKEFTEEERPDRFIYPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1076

Query: 774  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIA 817
             S + +        Y  +GT Y   E+   ++GRIL+F I+E            + + I 
Sbjct: 1077 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1135

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 874
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1136 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1189

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 929
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1190 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1247

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--------SDVG 981
            N  LF  +  S  +   +  +L    ++HLG+ VN F    +  R+ D        SD  
Sbjct: 1248 NIALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFR--IRCRISDPANDKKHFSDAD 1303

Query: 982  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 1041
            +    ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T 
Sbjct: 1304 KRHVTMYASLDGNLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQ 1363

Query: 1042 --DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
               A+  +DGDL+  +L L      +++K +   VE
Sbjct: 1364 GNPARGIIDGDLVWRYLYLPNNEKIDVAKKIAPIVE 1399



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 77/401 (19%), Positives = 162/401 (40%), Gaps = 78/401 (19%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP--------------- 47
           +++   + H  T V H+    F +  E  L++A    I +  L P               
Sbjct: 1   MYSICKSTHPATGVEHAITCYFFNRSEKCLVVAGANIIRVFRLIPDVDITKKEKYTESRP 60

Query: 48  --QGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMG 105
               L+ +    ++G + +++     G  +D L ++    K  V+++D ++ +L T ++ 
Sbjct: 61  PKMKLECLSQYTLHGNVMSMQAVTLVGSQRDSLLLSFRDAKLSVVEYDQDTHDLRTVSLH 120

Query: 106 DVSDRIGRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF----------------- 144
              +   R   T++  I I+  DP+ R   + +Y     V+PF                 
Sbjct: 121 YFEEEEIRDGWTNHHHIPIVRVDPEGRCAVMLIYGRKLVVLPFKKDPSLDDGDLLDNSKA 180

Query: 145 -DNKGQLKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKT 192
             NK  +  ++ I L+ L+     ++D++FL+G  +PT+++LY+  +        R    
Sbjct: 181 SSNKTPILSSYMIVLKCLEEKMDNIIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTC 240

Query: 193 YEVALK---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------- 241
             VA+     +      WS +NL       +PV  PL G LI+   +++Y +        
Sbjct: 241 AMVAISLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYGV 300

Query: 242 -----ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKE 287
                A      P++P   +   ++  +GS        R ++   +G L++L +      
Sbjct: 301 SLNSLAETSTNFPLKP---QEGVKISLEGSQVAFISSDRLVISLKSGELYVLSLFADSMR 357

Query: 288 KVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
            V G   +    + + S +   ++  +++GS  G+S L++ 
Sbjct: 358 SVRGFHFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRF 398



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 416
           ++VT SG  K+G+L ++++ I      + EL G + MW++  + ++             F
Sbjct: 505 ELVTTSGYGKNGALCVLQHSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 564

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 565 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 622

Query: 476 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 623 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTARLHAQ 672


>gi|307191845|gb|EFN75271.1| Cleavage and polyadenylation specificity factor subunit 1
            [Harpegnathos saltator]
          Length = 1214

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAF 831
            Y  +GT Y   E+   ++GRIL+F I+E            + + I  KE KG + ++   
Sbjct: 890  YIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 948

Query: 832  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
            +G L+ A+ QKI  Y W L+D+   G   + ++   H  +L++        I++ D+ KS
Sbjct: 949  SGFLVTAVGQKI--YIWQLKDNDLVGIAFIDTQIYIH-QMLSI-----KSLILIADVYKS 1000

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGA 943
            ISLL ++ +   +   +RD+    +  +E L D+  LG      E+N  LF  +  S  +
Sbjct: 1001 ISLLRFQEKCRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLIADGESNLALFMYQPESRES 1060

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--------SDVGQIPTVIFGTVNGVI 995
               ++  L    ++HLG+ +N F    +  R+ D        SD  +    ++ +++G +
Sbjct: 1061 LGGQK--LIRKADFHLGQKINTFFR--IKCRVTDVASDKKHFSDADKKHVTMYASLDGSL 1116

Query: 996  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN--EKKTVDAKNFLDGDLIE 1053
            G +  +P + Y  L  LQ  L   I  + GLN + +R++ +    +   A+  +DGDL+ 
Sbjct: 1117 GYVLPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSYVRNQGNPARGIIDGDLVW 1176

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
             +L L      +++K +   V+E+ + + E+ R
Sbjct: 1177 RYLSLPNNEKADVAKKIGTRVQEIIEDITEIDR 1209



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 86/417 (20%), Positives = 161/417 (38%), Gaps = 109/417 (26%)

Query: 163 VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYEVALK---DKDFVEGPWSQNNLD 213
           V+D++FL+G  +PT+++LY+  +        R      VA+     +      WS +NL 
Sbjct: 4   VIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAISLNIQQRVHPIIWSVSNLP 63

Query: 214 NGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPIRPS----ITK 256
                 +PV  PL G LI+   +++Y +             A+     P+RP     I+ 
Sbjct: 64  FDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYGVSLNSLADTSTNFPLRPQDGVKISL 123

Query: 257 AYGRVD-ADGSRYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVV 314
              +V      R ++   +G L++L +       V G   +    + + S +   ++  +
Sbjct: 124 EGAQVAFLSADRLVISLKSGELYVLSLFADSMRSVRGFHFDKAAASVLTSCVCMCEDNYL 183

Query: 315 YIGSSYGDSQLIKL----------------------NLQPDAKG---------------- 336
           ++GS  G+S L++                       N +P AK                 
Sbjct: 184 FLGSRLGNSLLLRFTEKEPETIKSLDDGEINIEDNDNEEPPAKKAKQDFLGDWMASDVLD 243

Query: 337 ---------------------SYV-EVLERYVNLGPIVDFCVVDL---------ERQGQG 365
                                SY+ EV +  +N+GP  +  + +           +    
Sbjct: 244 IKDPEELEVYGSETHTSIQITSYIFEVCDSLLNIGPCGNISMGEPAFLSEEFAHNQNPDV 303

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 416
           ++VT SG  K+G+L +++  I      + EL G + MW++  S ++             F
Sbjct: 304 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGSLNNDEQVKSETEGSHAF 363

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 472
           L++S   E   + +    E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 364 LILS--QEDSTMVLQTGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 418


>gi|296227035|ref|XP_002807684.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Callithrix jacchus]
          Length = 1394

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 190/460 (41%), Gaps = 62/460 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 923  VDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 982

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 983  KVYAVATSTNTPCTRIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1042

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVFIVED---- 810
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+  V +    
Sbjct: 1043 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVTE 1101

Query: 811  -------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
                    K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1102 PRQTLTXXKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1156

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1157 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1216

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF-----RHGSLVMRL 975
             LG   ++ + NL       E        RL    ++H+G  VN F     R  +  +  
Sbjct: 1217 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1276

Query: 976  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                        F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1277 KSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1336

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1337 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1376



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 119/593 (20%), Positives = 235/593 (39%), Gaps = 140/593 (23%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSAEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGE----TSIASTISYL-------------DNAVVYIGSSYGDSQLIKLNLQPDAKGSY 338
                   TS++ T  +L             D   VY   +   +QL   +         
Sbjct: 364 KAAASVLTTSVSGTEGFLCAAGGKSVPQDEXDEIEVYGSETQSGTQLATYSF-------- 415

Query: 339 VEVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGIN 389
            EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I   
Sbjct: 416 -EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQ 474

Query: 390 EQASVELQGIKGMWSL-------------------RSSTDDPFDT-----FLVVSFISET 425
              + EL G   MW++                     ST +  D      FL++S    T
Sbjct: 475 VVTTFELPGCYDMWTVIAPVRKEEEENPKGEGTEQEPSTPEADDDSRRHGFLILSREDST 534

Query: 426 RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
            IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 535 MILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 585


>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
           associated protein [Thalassiosira pseudonana CCMP1335]
 gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
           associated protein [Thalassiosira pseudonana CCMP1335]
          Length = 1212

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 185/410 (45%), Gaps = 44/410 (10%)

Query: 347 NLGPIVDFCVVDLE-RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG-MWS 404
           +L P++   V +L   +   Q+    G     SLR++R+G+ + E A  EL G+ G +++
Sbjct: 386 SLAPVISVLVGELAGNEVSPQLYALCGRGPTSSLRVLRHGLSVTELAVSELPGVPGAVFN 445

Query: 405 LR----SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE-GFCSQTQTLFCH----- 454
           +R    +     +D ++VVSF   T +L++   + +EE   E GF +   TL C      
Sbjct: 446 VRDDQAAKNGKFYDRYIVVSFADATLVLSVG--ETVEEMGKESGFLTTEPTLACSALGNG 503

Query: 455 --DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 512
                   +VQV  G VR +    R   ++W  P    +  A+AN SQ+L+A  GG L+Y
Sbjct: 504 GNGEQEGGIVQVYPGGVRHIQ---RGSVSQWHVPGIKKIECASANESQILIALVGGELIY 560

Query: 513 LEIG--DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNL 570
            E+    G L E     +  ++  LD+  + +  S S  AAVG   D +VR+ SL   +L
Sbjct: 561 FELDPLSGNLMEAATKDVGADVCSLDVGAVPKGKSRSLFAAVG-CRDSTVRLLSLAPGSL 619

Query: 571 ITKEHLG--GEIIPRSVLL---CAFEGISYLLCALG--DGHLLNFLLNMKTGEL-TDRKK 622
           + ++     G   P SV L      +G   +  ++G  DG  L   ++  TG + T   +
Sbjct: 620 LEQKSSTTLGTTRPHSVALSNGVGSDGAGEITLSVGLDDGSALRAGVDPITGAMSTSPSR 679

Query: 623 VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 682
             LG +P+ +     + +      S RP +  +   +   + ++   + H C F++ A  
Sbjct: 680 RFLGARPVAVSRVMIEGSPSTLLLSSRPWIGRAGQGRHALAPMSYAPLDHGCSFSNEAVR 739

Query: 683 DS-----------LAIAKEG--ELTIGTIDDIQKLHIRSIPLGEHPRRIC 719
           +            L++ + G  ++ +G  DD +  +   I L   PR++C
Sbjct: 740 EGIVATSGSTLRILSVGESGGNDVVLGAEDD-EAFNSTRIGLRYTPRQMC 788



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 36/300 (12%)

Query: 803  ILVFIVEDGKLQLIAEKETK-GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 861
            +L  +V   +LQL+       G V SL  F G+LL  + + ++LY+      G R+L  +
Sbjct: 924  VLYRVVNGERLQLLHRTTVDDGPVLSLVHFQGRLLVGVGKTVRLYEM-----GKRQLLKK 978

Query: 862  CGHHGH-ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 920
            C   G   +   +Q  GD   VGD+M+S+  + Y      +   A+D N   ++  E+LD
Sbjct: 979  CELRGMPTMVKTLQAAGDRAFVGDMMQSMQFIRYDSTANRLVLVAKDRNPRPITCQELLD 1038

Query: 921  -DDIYLGAE-NNFNLFTVRKNSEG--------------ATDEERGRLEVVGEYHLGEFVN 964
             + + +G +  N  +  + + ++               A D+   +LE +  YH+GE V 
Sbjct: 1039 INTVAVGDKFGNVTILRLPRGADAGAIDVTGTRALWDSARDDATPKLETLCTYHVGEVVT 1098

Query: 965  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGV 1023
                 SLV        G   ++I+ TV G +G        +   F   L+  LR      
Sbjct: 1099 SMTRASLV-------AGGAESLIYVTVTGRVGAFVPFTSRDDVEFYTSLEGFLRTETPRP 1151

Query: 1024 GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
             G + + +RS+         K+ +DGDL ++F  L      +I+++++ SV E+ K++E+
Sbjct: 1152 TGRDPQSYRSYY-----APMKHIVDGDLCDAFAQLPYETKQKIAESLDRSVGEVMKKLED 1206


>gi|195122290|ref|XP_002005645.1| GI18959 [Drosophila mojavensis]
 gi|193910713|gb|EDW09580.1| GI18959 [Drosophila mojavensis]
          Length = 1431

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 195/435 (44%), Gaps = 62/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLK-------------NQSCAEESE---------- 742
            +R +PL   PR++ +  ++R + + + K             ++  +EES           
Sbjct: 1002 VRKVPLRCTPRQLVYHRENRVYCLITQKEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1061

Query: 743  MHFVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEE 795
            +  + L+  +T+E +  ++   + +E+  +      S +        Y C+GT +    E
Sbjct: 1062 LFEMVLISPETWEIVPDASIQFEPWEHVTAFKLVKLSYEGTRSGLKEYLCIGTNFNY-SE 1120

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1121 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVVGFLVTGLGQKI- 1179

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1180 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1235

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1236 SRDFNPLEVFGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYHL 1293

Query: 960  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            G+ VN  FR       L  R P     +   VI+GT++G +G    LP + Y     LQ 
Sbjct: 1294 GQVVNTMFRVQCHQRGLHQRQPFLYENK-HFVIYGTLDGALGYCLPLPEKVYRRFLMLQN 1352

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
             L      + GLN +++R+    KK     ++  +DGDLI S+  L+ +   E++K +  
Sbjct: 1353 VLLSYQDHLCGLNPKEYRTIKTVKKMGINPSRCIIDGDLIWSYRMLAHSERSEVAKKIGT 1412

Query: 1073 SVEELCKRVEELTRL 1087
              EE+   + E+ RL
Sbjct: 1413 RTEEILADLLEIERL 1427



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/390 (20%), Positives = 150/390 (38%), Gaps = 102/390 (26%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP----------- 52
           H  T+V  +    F +  E NL++A    ++++ + P       Q L P           
Sbjct: 9   HAATSVEFAISCRFFNNVEENLVVAGANVLKVYRIAPNVDATQRQKLNPSEMRLAPKMRL 68

Query: 53  --MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDR 110
             +    +YG + +L+     G  +D L ++ +  K  VLQ DA++  L T ++    + 
Sbjct: 69  ECLASYSLYGNVMSLQSVSLAGGMRDALLVSFKDAKLSVLQLDADTQTLKTLSLHYFEED 128

Query: 111 IGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE-------------- 152
             R    G+  +    +DPD R   + +Y     V+PF     L E              
Sbjct: 129 DIRGGWTGRYHVPVVRVDPDARCAIMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPT 188

Query: 153 ----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVAL 197
                     ++ I L +L      VLDI+FL+G  +PT+++LY+       V+T    +
Sbjct: 189 ALVSRTPIMASYLIALADLDEKLDNVLDIQFLHGYYEPTLLILYEP------VRTCAGRI 242

Query: 198 KDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------------CSANA 244
           K                    + P+  P+ G L++    ++Y              SA+ 
Sbjct: 243 K--------------------VFPIQKPIGGCLVMTVNAVIYLNQSVPPYGVSLNSSADN 282

Query: 245 FKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKEK-VTGLKIEL 296
             + P++P      S+  A +  +D D  + ++    G L++L +  +  + V       
Sbjct: 283 STSFPLKPQDNVRLSLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSMRTVRNFHFHK 340

Query: 297 LGETSIASTISYLDNAVVYIGSSYGDSQLI 326
              + + S I       +++GS  G+S L+
Sbjct: 341 AAASVLTSCICVCHTEYIFLGSRLGNSLLL 370


>gi|195455711|ref|XP_002074834.1| GK23274 [Drosophila willistoni]
 gi|194170919|gb|EDW85820.1| GK23274 [Drosophila willistoni]
          Length = 1463

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 212/477 (44%), Gaps = 67/477 (14%)

Query: 669  EVSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQ 723
            EV     FN+   P+  L      EL I  +           +R +PL   PR++ +  +
Sbjct: 992  EVRSFAAFNNINIPNGFLFFDTTFELKISVLPSYLSYDSTWPVRKVPLRCTPRQLVYHRE 1051

Query: 724  SRTFAICSL-------------KNQSCAEESE-MHFVR---------LLDDQTFEFI--S 758
            +R + + +              +++  +EES    F+          L+  +T+E +  +
Sbjct: 1052 NRVYCLITQTEEPMTKFYRFNGEDKELSEESRGERFIYPIGSQFDMVLISPETWEIVPDA 1111

Query: 759  TYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEENEPTKGRILVF-----IV 808
            +   + +E+     I+  S+    +    Y C+GT +    E+  ++G I ++     + 
Sbjct: 1112 SIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SEDITSRGNIHIYDIIEVVP 1170

Query: 809  EDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 862
            E GK      L+ + +KE KG V +++   G L+  + QKI  Y W LRD    +L    
Sbjct: 1171 EPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI--YIWQLRDG---DLIGVA 1225

Query: 863  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 922
                +I    + T    I + D+ KSISLL ++ E   +   +RD+N   +  +E + D+
Sbjct: 1226 FIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIEFMVDN 1285

Query: 923  IYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-FR----HGSLV 972
              LG     AE+N  ++  +  +  +   ++  L    +YHLG+ VN  FR       L 
Sbjct: 1286 TNLGFLVTDAESNLIVYMYQPEARESLGGQK--LLRKADYHLGQVVNTMFRVQCHQRGLH 1343

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
             R P     +   V++GT++G +G    LP + Y     LQ  L      + GLN +++R
Sbjct: 1344 QRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQNVLLSYQDHLCGLNPKEYR 1402

Query: 1033 SFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            +  + K+     ++  +DGDLI S+  L+ +  +E++K +    EE+   + E+ RL
Sbjct: 1403 TLKSSKRLGINPSRCIIDGDLIWSYRLLANSERNEVAKKIGTRTEEILADLLEIERL 1459



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/402 (21%), Positives = 160/402 (39%), Gaps = 87/402 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP--MLDVP--- 57
            H  T V  S    F + QE NL++A    ++++ + P       Q L P  M   P   
Sbjct: 8   THAATAVEFSISCRFFNNQEENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRVAPKMR 67

Query: 58  --------IYGRIATLEL--FRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV 107
                   +YG + +L+       G  +D L ++ +  K  VLQ D ++  L T ++   
Sbjct: 68  LECLATYSLYGNVMSLQCVSLAGAGAMRDALLVSFKDAKLSVLQHDPDTYALKTLSLHYF 127

Query: 108 SDRIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE----------- 152
            +   R    G+  +    +DPD R   + +Y     V+PF     L E           
Sbjct: 128 EEEDIRGGWTGRYYVPEVRVDPDARCAVMLIYGKRLVVLPFRKDNSLDEIELADVKPIKK 187

Query: 153 -------------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-ARHVKTY 193
                        ++ I L +L      VLDI+FL+G  +PT+++LY+  +  A  +K  
Sbjct: 188 APTALVTRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCAGRIKVR 247

Query: 194 E-------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY------ 239
                   ++L  +  V    W+ NNL      L+P+  P+ G L++    ++Y      
Sbjct: 248 SDTCVLVAISLNIQQRVHPIIWTVNNLPFDCLRLLPIQKPIGGCLVMTVNAVIYLNQSVP 307

Query: 240 -------CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHE 285
                   SA+   + P++P      S+  A +  +D D  + ++    G L++L +  +
Sbjct: 308 PYGVSLNSSADNSTSFPLKPQDGVRISLDCANFAFIDVD--KLVVSLRTGDLYVLTLCVD 365

Query: 286 KEK-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
             + V          + + S I       +++GS  G+S L+
Sbjct: 366 SMRTVRNFHFHKAASSVLTSCICVCHMEYIFLGSRLGNSLLL 407



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 490 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAESLQDVKIELVAATGHSKNGALSVFV 549

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL+G   +W++      ++S  D  D F+++S  + T  L +    E+ 
Sbjct: 550 NCINPQIITSFELEGCLDVWTVFDDATKKTSRQDQHD-FMLLSQKNST--LVLQTGQEIN 606

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +   N+ +VQVT+  VRL+  T
Sbjct: 607 EIENTGFTVNQATIFVGNLGQNRFIVQVTTRHVRLLQGT 645


>gi|312118693|ref|XP_003151606.1| hypothetical protein LOAG_16070 [Loa loa]
 gi|307753229|gb|EFO12463.1| hypothetical protein LOAG_16070 [Loa loa]
          Length = 83

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/77 (54%), Positives = 61/77 (79%), Gaps = 1/77 (1%)

Query: 5  NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
          NY+VTA+KPT VTH+ VG+F  P ELNL++AK  R+E+ L+TP+GL+P  + P++GRIAT
Sbjct: 4  NYIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGRIAT 63

Query: 65 LELFRPHGEAQDFLFIA 81
          ++LFR  GE +D L ++
Sbjct: 64 IKLFRAPGE-EDHLLVS 79


>gi|358372791|dbj|GAA89393.1| cleavage and polyadenylation specificity factor subunit A
            [Aspergillus kawachii IFO 4308]
          Length = 1372

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 179/429 (41%), Gaps = 52/429 (12%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 746
            ++ + LGE    + +   S  + +  C   +    ++ E+H                 F+
Sbjct: 940  LKKVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPDDDELHPEWRNEAISFFPSARGSFI 999

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 801
            +L+   T+  I +Y L T EY  +I + S     N +       VGTA+    E+ P++G
Sbjct: 1000 KLVSPNTWSIIDSYSLGTDEYVMAIKNISLEISENTHERKDLIVVGTAFAR-GEDIPSRG 1058

Query: 802  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
             I VF V            D KL+LI ++  KGAV +L+   G+    + Q  +     L
Sbjct: 1059 CIYVFEVVQVVPDPDDPETDRKLKLIGKESVKGAVTALSEIGGQGFVLVAQGQKCMVRGL 1118

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            ++DG+    +      ++  +         ++GD +K I    Y  E   +   A+D + 
Sbjct: 1119 KEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGIWFAGYSEEPYKMSLFAKDLDY 1178

Query: 911  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF- 966
              +SA E L D   L    A+++ N+  ++ + E        +L    ++H G F +   
Sbjct: 1179 LEVSAAEFLPDGRRLFIVVADSDCNIHVLQYDPEDPKSSNGDKLLSRSKFHTGNFASTLT 1238

Query: 967  -------RHGSLVMRLPDSDV---GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
                       ++    D D+     +  V+  T NG +G+I  +P E Y  L  LQ+ L
Sbjct: 1239 LLPRTMVSSEKMISNSDDMDIDNQSALHQVLMTTQNGSLGLITCMPEESYRRLSALQSQL 1298

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
               ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+  +     E
Sbjct: 1299 TNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIAGRVGAREWE 1356

Query: 1077 LCKRVEELT 1085
            +   +E ++
Sbjct: 1357 IKADLEAIS 1365


>gi|407044064|gb|EKE42344.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
          Length = 1145

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 226/1173 (19%), Positives = 450/1173 (38%), Gaps = 151/1173 (12%)

Query: 16   VTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQG-LQPMLDVPIYGRIATLELFRPHGE 73
            +THS  G+F+    + L+I +  T IE++ +     +  +L   ++  I ++   R   E
Sbjct: 14   ITHSLFGDFSGNGVIELLIVRSQTTIELYRINENDQVSLILQESVFCMIRSMCKIRIGSE 73

Query: 74   AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIIDPDCR--LI 130
            A+D++ I ++     +L + +E ++LI     ++  + G R    G+    DP  R  +I
Sbjct: 74   AKDYILIGSDSGSITLLGYSSEQNKLIP-IYNEIFGKSGIRRVVPGEYICSDPMGRAAMI 132

Query: 131  GLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKPTIVVL------- 180
            G      L  +   D+ G++  +  +   +   +    I    G   P    +       
Sbjct: 133  GAIEKQKLVYIFNRDSNGKITISSPLEAHKSNTICYNIIALNVGYDNPMFATIEVDYNEQ 192

Query: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNN--------LDNGADLLIPV----PPPLCG 228
            Y  + + R +K Y V      F E     N+        +D  ++ LIP+         G
Sbjct: 193  YLSHIEHRIIKKYVV------FYELDLGLNHVIRKVAEPIDPTSNYLIPILSLNEGYHYG 246

Query: 229  VLIIGEETIVYCSANAFK-AIPI---------RPSITKAYGRVDADGSRYLL--GDHAGL 276
            + I  E+ I + +    K  IPI           ++  ++      G  ++L   +   L
Sbjct: 247  LFICSEDKITWFNIGHDKICIPIPKYHNQSNTHSTLITSHVMRTHKGKHFVLLQSEFGDL 306

Query: 277  LHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQL--------IKL 328
              L     EK ++  + +        A ++ +           YGDS L        I +
Sbjct: 307  FQLSFDIKEKGQLDNIHLRYFDSIPTALSLQFSKRGHFLCVGEYGDSILYNIISMENITI 366

Query: 329  NLQPDAKGSY--------VEVLERYVNLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSL 379
              + D +  +        +E + R+ +L P++D  V      Q   ++    G     ++
Sbjct: 367  PFEKDGRLEFERHKEILNLEEIYRFKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTI 426

Query: 380  RIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
            +I++N +   +   +EL  I   +W L+  TD+ +  +L +S+ + T +L +  EDE+ E
Sbjct: 427  KILKNQLNTLDAVEIELPAIPISIWPLKKETDE-YHQYLAISYSNITTLLKIT-EDEMSE 484

Query: 439  TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA 498
                     T +L          +QV +  + + S   ++   E +         A+ N 
Sbjct: 485  CTTSPILLSTPSLLVSMLFDGTFLQVMTDRIIIYSEPIQQFITEDQK-----YVCASCNG 539

Query: 499  SQVLLATGGGH---LVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 555
            S+++++    +   L+Y +   G L  ++      +I+ L ++    +PS  +  A+G  
Sbjct: 540  SELIVSVEKNNQTSLIYFQYQSGHLLTMERKDNLSKITALALDQF--HPS--KHCAIGC- 594

Query: 556  TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF---EGISYLLCALGDGHLLNFLLN 611
             D SV + SL P+        +  +    S+    F   +  SYL   L +G L   + +
Sbjct: 595  IDGSVHLLSLIPNETTKALSRVSLQTYECSINSLTFNIIDNTSYLFAGLSNGLLGRSVYD 654

Query: 612  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 671
              +GE+ +     +G++P+TL          V A S R  + Y +  K+  + +N++  +
Sbjct: 655  PISGEINESSLNFVGSRPVTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTT 714

Query: 672  HMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC 730
              C        +++AI  E  + I TI+     L  ++I +   PR++          I 
Sbjct: 715  LACGILVPFVDNAIAIICEKVMKIITIESTSSSLTGKNIQISYTPRKVITHPTIPLLYIL 774

Query: 731  SLKNQSCAEESEM---------HFVRLLDDQTFEFISTYPLDTFEY---GCSILSCSFSD 778
               N SC   +E+           +  LD    E I     D  ++   GC + S S   
Sbjct: 775  EGDNNSCKVGNEIIQTNEGNWVGGIHTLDASQDELIQFIDFDNNKHPTGGCVVRSIS--- 831

Query: 779  DSNVYYCVGTAYVLPEENEPTKGR---ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
             +  Y  VG   +   +  P + +   I V+ + +  +      + +  V +   F G +
Sbjct: 832  KNQTYLIVGV--IESYKTRPIQWKSSEIQVYSINERSINYCYSTKVEYPVRAFAEFKGMV 889

Query: 836  LAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            LA +   ++LY    K +L+    R+  S+           +   G+ I++  +    +L
Sbjct: 890  LAGVGNILRLYDIGLKSLLKKAEKRQFASDIAQ--------LHVIGETILLTGVSDGFNL 941

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF----------------- 934
            + Y       +  A D    W+     L+    L ++    +F                 
Sbjct: 942  IRYNQINHKFDIYA-DSLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEIEEQALNPFS 1000

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
            T+ +  +   +    ++    ++ +G+    F   SL+   P          IF   N +
Sbjct: 1001 TLLQPHKTIYEGSSYKMVTATQFFVGDIATSFAQCSLIPGAPS---------IFLYSNFM 1051

Query: 995  IGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 1051
             G+ A +P        F + L+ ++R     +   NH  +RS       V  K+ +DGDL
Sbjct: 1052 GGLSALIPLQSQNDIDFYQHLEMHMRVHWTNLTDRNHISFRS-----SIVPVKDTVDGDL 1106

Query: 1052 IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             E +  L      EI++ M   V E+ K++ +L
Sbjct: 1107 CELYERLPYEIQQEIAEEMEKEVNEIIKKLHDL 1139


>gi|328771718|gb|EGF81757.1| hypothetical protein BATDEDRAFT_34564 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1248

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 161/664 (24%), Positives = 272/664 (40%), Gaps = 79/664 (11%)

Query: 347  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI-NEQASVELQGIKGMWSL 405
            N GP +DFC+ D        +   +GA   G ++ +R+G+G+  +  + +  G   +W L
Sbjct: 439  NAGPTLDFCLADTLGNNTDTLYMTAGAAPLGYIQEIRHGVGVLIDDTTKQFDGAIKLWGL 498

Query: 406  RSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL---FCHDAIYNQL 461
            R+S +D  D+ LV SF++ TRI+ M  +DE E+ ++I GF     TL    C  + Y   
Sbjct: 499  RTSCEDTVDSLLVASFVASTRIMYMQ-DDEFEDISDISGFTIDVATLNTAACFVSGY--F 555

Query: 462  VQVTSGSVRLVSSTSRELRN------EWKSPPGYSVNVATANASQVLLA-TGGGHLVYLE 514
            +QV    + +      +  N       W  P  + V  +      VLL  TG   L+ L+
Sbjct: 556  IQVHLHGIIIARPLLDKTINNNTCTANWSPPNDHKVGFSAFYQDCVLLTLTGENSLMLLK 615

Query: 515  IGDGILTEVKHAQLEYEIS-CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK 573
            +   I+ E  + Q+E   S  LDI P  +  S          T I+V     P    I K
Sbjct: 616  V---IIQENSNVQIESISSISLDIEPSSQYYS----------TPINV-----PHSICIIK 657

Query: 574  EHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
                 EI  RS  L +     +LL  + DG LL+F L+ +  ++     V L      L 
Sbjct: 658  ---SKEISSRSNALISKP---HLLIGIRDGALLDFTLDFENDQINFMPPVILQLGDCPLD 711

Query: 634  TFSSKNT----THVFAASDRP-TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS-LAI 687
               S +T     +V   +++   +  S    +  S +  K + H   F   A  D+    
Sbjct: 712  LVYSHHTDPLDRYVLGVTNQTWQLSVSPIGGIRISQLLHKPILHAARFLYDADVDTGFLF 771

Query: 688  AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR 747
                 L+   +D     HIR+I +G+ PRRI     ++   +    +Q  A+E  +  V+
Sbjct: 772  LTSDTLSFVKVDPESGYHIRNINMGDTPRRILVDPVTKLLVVAG-SSQGDADEI-LTTVK 829

Query: 748  LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI 807
            +++  T +  +T  L   E   S++       +  Y C+GT          T GR+LVF 
Sbjct: 830  VMNPDTGQVYATERLAANETIHSLIVWHVK-PTKRYICMGTRI------HATSGRVLVFG 882

Query: 808  VEDG------KLQLIAEKETKGAVYSLNAF-NGKLLAAINQ-----KIQLYKWMLRDDGT 855
            ++        K  L+ +    G V +L  F N  LLA+        KI+     +    +
Sbjct: 883  LKPATKNKHIKFTLMGQYTLNGPVLALCTFVNSYLLASAGSTLYQLKIEAVHRTITAGAS 942

Query: 856  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
             ++ S       I AL  Q     I + +   SIS+  +     A      D  +   S 
Sbjct: 943  IDINSII---TRIHALKTQ-----IFIANTQDSISVYKFDIATKAFAFIKSDVTSRVGSE 994

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERG----RLEVVGEYHLGEFVNRFRHGSL 971
               LDD + +G + + N++ +  N    +D         ++   E+H+ + V + + GS+
Sbjct: 995  CFPLDDSLVIGTDRHGNIYGLDTNQGEDSDTHESTDSQSMQTGFEFHILDIVLQLKPGSM 1054

Query: 972  VMRL 975
              RL
Sbjct: 1055 KHRL 1058


>gi|49619065|gb|AAT68117.1| cleavage and polyadenylation specific factor 1 [Danio rerio]
          Length = 1105

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 206/475 (43%), Gaps = 64/475 (13%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 634  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 693

Query: 725  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFI--ST 759
            + +A+C+   + C        EE E   +                +L+   ++E I  + 
Sbjct: 694  KVYAVCTSVKEPCTRIPRMTGEEKEFETIERDERYIHPQQDKFSIQLISPVSWEAIPNTR 753

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + +      V     Y  +GT  +  EE    +GRIL+      + E
Sbjct: 754  VDLEEWEHVTCMKTVALKSQETVSGLKGYVALGTCLMQGEEVT-CRGRILILDVIEVVPE 812

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD-DGTRELQSEC 862
             G      K +++ EKE KG V +L   +G L++AI QKI L+     D  G   + ++ 
Sbjct: 813  PGQPLTKNKFKVLYEKEQKGPVTALCHCSGFLVSAIGQKIFLWSLKYNDLTGMAFIDTQL 872

Query: 863  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 922
                +I  +Y  +  +FI+  D+MKSISLL Y+ E   +   +RD     + ++E + D+
Sbjct: 873  ----YIHQMY--SIKNFILAADVMKSISLLRYQPESKTLSLVSRDAKPLEVYSIEFMVDN 926

Query: 923  IYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 979
              LG   ++ + NL       E        RL    ++++G  VN F        L  ++
Sbjct: 927  NQLGFLVSDRDKNLMVYMYLPEAKESFGGMRLLRRADFNVGSHVNAFWRMPCRGTLDTAN 986

Query: 980  VGQIP-----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
               +         F T++G +G++  +  + Y  L  LQ  L  ++    GLN + +R  
Sbjct: 987  KKALTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPKAFRML 1046

Query: 1035 NNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            + +++T+    KN LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1047 HCDRRTLQNAVKNILDGELLNKYLYLSTMERSELAKKIGTTPDIILDDLLEIERV 1101


>gi|194756960|ref|XP_001960738.1| GF11349 [Drosophila ananassae]
 gi|190622036|gb|EDV37560.1| GF11349 [Drosophila ananassae]
          Length = 1455

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 199/435 (45%), Gaps = 62/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 747
            IR +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 IRKVPLRCTPRQLVYHRENRVYCLITQNEEPMTKFYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 748  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1086 QFEMVLISPETWEIVPDASIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1144

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1145 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI- 1203

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1204 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1259

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1260 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1317

Query: 960  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 1318 GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKLYRRFLMLQN 1376

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
             L    + + GLN +++R+    KK     ++  +DGDLI S+  L+ +  +E++K +  
Sbjct: 1377 VLLSYQEHLCGLNPKEYRTIKAVKKQGINPSRCIIDGDLIWSYRLLANSERNEVAKKIGT 1436

Query: 1073 SVEELCKRVEELTRL 1087
              EE+   + E+ RL
Sbjct: 1437 RTEEILSDLLEIERL 1451



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/400 (21%), Positives = 159/400 (39%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP--MLDVP--- 57
            H  T V  S    F +  E NL++A    ++++ + P       Q L P  M   P   
Sbjct: 8   THPATAVEFSIACRFFNNLEENLVVAGANVLKVYRIAPNVEAGQRQKLNPTEMRVAPKMR 67

Query: 58  --------IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
                   +YG + +L+     G  +D L I+ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTYALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 EDIRGGWTGRYFVPVVRVDPDSRCAVMLVYGKRLVVLPFRKDNTLDEIELADVKPIKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L +L      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVTRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCQQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   + P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTSFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I  L +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLL 405



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLNDLKIELVAATGHSKNGALSVFV 544

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL G   +W++      ++S  D  D F+++S  + T +L      E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHD-FMLLSQRNSTLVLQTG--QEIN 601

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|156086042|ref|XP_001610430.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797683|gb|EDO06862.1| conserved hypothetical protein [Babesia bovis]
          Length = 1450

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 195/942 (20%), Positives = 335/942 (35%), Gaps = 214/942 (22%)

Query: 344  RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW 403
            +  NLGPIVDF        G   ++ C G   +G +  + NG+ I+  AS    G+    
Sbjct: 523  KQTNLGPIVDFTFGPQSDSGAIPILACCGYGAEGRVCSITNGVAIDVMASSPASGVLYTT 582

Query: 404  SLRSSTDDPFDTFLVVSFISETRILAMNL----EDELEETEIE----------------- 442
            +L    +   +  +  S+ + TR   + +    + +  +T I+                 
Sbjct: 583  ALPLFNEANNNFMICTSYFNRTRFYKVVVPPAPKRDPSKTAIDFVKQPLWVVTSMDPSSH 642

Query: 443  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR------NEWKSPPGYSVNVATA 496
             F    +TL         ++QVT+  + LV+  S  +       N+     G +V     
Sbjct: 643  RFVEHMRTLLMVPYGTQMVLQVTTNGISLVNYKSVAIPRVDHSLNDICKIAGIAVGSGVM 702

Query: 497  NAS---------QVLLATGGGHLVYLEIGDGILTEVKHAQ-LEYEISCLDINPIGE--NP 544
              S          V +       + L++ +G+  ++ H   L  ++S       G+    
Sbjct: 703  PISIVSCHLCDSGVFIGLSNHVFLILDVSNGV--KILHKSVLPKQVSSTAYLSGGDFKTK 760

Query: 545  SYSQIAAVGMWTDISVRIFSLPDLNLI--TKEHLGGEIIPRSVLLCAFEGISYLLCALGD 602
              + + AV  W D  + + S   L ++  TK   G  +  R+V       ++ +  AL D
Sbjct: 761  RRTGLIAVSTWEDTEISLISPEGLQMLHTTKVPCGYGVAIRAVRFGVVGDVALVFAALSD 820

Query: 603  GHLLNFLLNM----KTGELTDRK---------KVSLGTQPITLRTFSSKNTT-------- 641
            G L  + L      K G  T+ +         KVS G  PI L   S   +         
Sbjct: 821  GTLCVYRLKFGDCDKDGLGTNTQLSMVMENVIKVSNG--PIGLDAISMHASVPGSGGTNL 878

Query: 642  ---HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA-AFPD--SLAIAKEGELTI 695
                +    D P +IY++  KL Y  VN+  +  +  FN     P   SL    +  + I
Sbjct: 879  LKNRIVTTGDNPMLIYANRGKLEYVPVNVPRIDTVTSFNFVEKNPQGVSLVFTDKKSIHI 938

Query: 696  GTIDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAIC-----------SLKNQSCAEESEM 743
            G +D   +LH+ +I  G     IC H E       C           S+ + S       
Sbjct: 939  GHMDTALQLHVETICSGRSFETICYHDESDLVVVGCNGELIADCDMPSISDSSVTHNDSS 998

Query: 744  HF--------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 783
             F                    V+ +   T E + T  +       S+ +  F D     
Sbjct: 999  VFRCMDVASCGTIPGVYVLKSCVKFIHLGTKEVVHTLNMPQRHVITSMCTVKF-DGPKTL 1057

Query: 784  YCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN----------- 832
              +G++ +  ++  P++G I  F+V+     +I     K  V  L   N           
Sbjct: 1058 IALGSSLIQDKDGVPSQGYI--FLVD-----VIKSDAHKWNVVFLRTLNFIDKGVTQMTP 1110

Query: 833  --GKLLAAINQKIQLYKWMLRDD----------------------GTRELQSECGHHGHI 868
               +L+ A+N+ + +   +   D                      G   L +   +    
Sbjct: 1111 CINQLVVALNETVAVLSLVRGADPEPSDTLRSYKMEVLHESDESYGQYTLVTRAEYKSCS 1170

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
              + +    D IV+GDLM S+ +L ++  E  + E  +D+N+ + +A   +D    + A+
Sbjct: 1171 YVVSLDAYQDVIVIGDLMNSMRMLQWQGTE--LREVCKDFNSVYCTAAAAIDQTSCVVAD 1228

Query: 929  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHG-------SLVMRLPDSDVG 981
            ++ N +   K      D E  + E VG +H GE +NR R         +L+    D D+ 
Sbjct: 1229 SSGNFYVFAKRQVVTNDAEAIKAEDVGLFHHGELINRIRRNPKVQSRVALLNGNSDHDMP 1288

Query: 982  QIPTVI-----FGTVNGVIGVIASLPHE----------------QYLF------------ 1008
            + P        F  V G   V A++ H                 +Y F            
Sbjct: 1289 EFPMKTYCNRPFCCVQG--DVSAAISHSSCNDLVRGLAKPNKFWKYGFKTILTCVTTSGS 1346

Query: 1009 ---------------LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
                           L  ++  + ++    G +++E WRSF N      AK F+DGD IE
Sbjct: 1347 LLQLCIFDDTKLFCRLAFVEEGINRIQPQAGNISNEHWRSFKNRWMMCAAKGFIDGDAIE 1406

Query: 1054 SFLDLSRTRMDE----ISKT----MNVSVEELCKRVEELTRL 1087
            S+  L  +   E    +SKT    +  S E L   VE + RL
Sbjct: 1407 SYNRLDTSLKSEVYNMVSKTDAHGLFYSPELLSLEVEHIQRL 1448


>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
 gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
          Length = 645

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 132/659 (20%), Positives = 258/659 (39%), Gaps = 113/659 (17%)

Query: 518  GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 576
            G L E  +  ++  ++ C+ +  +      S   AVG+  D +VR+ SL   + ++   +
Sbjct: 2    GQLNEYTERKKMPSDVMCMALGSVPAGEQRSWFLAVGL-ADNTVRVISLDPSDCLSPRSM 60

Query: 577  GGEIIPRSV-LLCAFE---------------GISYLLCALGDGHLLNFLLNMKTGELTDR 620
              + +P +   LC  E               G  YL   L +G LL  +L+  +G+L D 
Sbjct: 61   --QALPSAAESLCIVEMGTGDTNEEGVASSAGCIYLNIGLTNGVLLRTVLDPVSGDLADT 118

Query: 621  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 680
            +   LG++P+ L     + +  V A S R  + Y    +   + ++ + + +   F+S  
Sbjct: 119  RTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYFQNRFHLTPLSYETLEYASGFSSEQ 178

Query: 681  FPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAE 739
              + +       L I  ++ +  +  + + PL   P+R     ++    I    + +  E
Sbjct: 179  CSEGIVAISTNTLRILALEKLGAVFNQITFPLEYTPKRFLIHNETGKLVISETDHNAYTE 238

Query: 740  ESEMHFVRLLDDQTFE----------------FIS-TYPLDTF----------------- 765
            E++    + + D+  E                FI+   P D F                 
Sbjct: 239  ETKNIRKKQMADEMKEAAGEDEQELANEMADAFINEVLPEDVFSAPKAGTGMWASQIRVM 298

Query: 766  ----------------EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG---RILVF 806
                            E   S+    F+ D   Y   G A  L    +   G    +  +
Sbjct: 299  DPINGHTYSKVQLAQNEAVLSMALVRFAVDQKWYVVAGVAKDLQMNPKIANGGFIDVYKY 358

Query: 807  IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 866
             V   +L+     E   A  ++  F G++L  + + +++Y     D G ++L  +C  + 
Sbjct: 359  DVHTHQLEHYHRTEIDDAPGAIAGFQGRVLVGVGRVLRIY-----DLGKKKLLRKC-ENK 412

Query: 867  HI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
            HI    + +Q  G  + V D+ +SI  + YK  E  +   A D +  W++   +LD D  
Sbjct: 413  HIPNQIVNIQAMGSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTV 472

Query: 925  LGAENNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRF 966
              A+   N+  +R   +     DE         +RG L       E +  +HLGE +   
Sbjct: 473  ATADKFGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMSL 532

Query: 967  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGG 1025
            +  +L+        G   ++I+ T++G +G +      E Y F + L+ ++R     + G
Sbjct: 533  QKATLI-------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLEMHMRNENTPLCG 585

Query: 1026 LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
             +H  +RS+         K+ +DGDL E F  +   +   I+  +  +  E+ K++E++
Sbjct: 586  RDHLSYRSY-----YYPVKHVMDGDLCEQFTSMDPAKQKSIASDLGRTPNEVAKKLEDI 639


>gi|332018184|gb|EGI58789.1| Cleavage and polyadenylation specificity factor subunit 1 [Acromyrmex
            echinatior]
          Length = 1412

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 122/515 (23%), Positives = 221/515 (42%), Gaps = 81/515 (15%)

Query: 627  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 683
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 897  TRICVMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 956

Query: 684  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA 738
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +    S A
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVIT----STA 1012

Query: 739  EESE------------------MHFVRLLDDQTFEFIS--TYP-----LDTFEYGCSILS 773
            E  +                    F R+  +  F  +S  T P     LD +E+   + +
Sbjct: 1013 EPLKSYYRFNGEDKVLTKLYYLFQFSRIFMNLLFSPVSWETIPNTKIELDQWEHVTCLKN 1072

Query: 774  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIA 817
             S + +        Y  +GT Y   E+   ++GRIL+F I+E            + + I 
Sbjct: 1073 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1131

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 874
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1132 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1185

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 929
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1186 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNSNLGFIVADGES 1243

Query: 930  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----- 984
            N  LF  +  S  +   +  +L    ++HLG+ +N F      +  P +D  Q       
Sbjct: 1244 NLALFMYQPESRESLGGQ--KLIRKADFHLGQKINTFFRIKCRITDPANDKKQFSGADKR 1301

Query: 985  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN---EKKT 1040
               ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R         + 
Sbjct: 1302 HVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRHTYKSYVRNQG 1361

Query: 1041 VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
              A+  +DGDL+  +L L      +++K +   V+
Sbjct: 1362 NPARGIIDGDLVWRYLFLPNNEKADLAKKIGTRVQ 1396



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 77/396 (19%), Positives = 161/396 (40%), Gaps = 79/396 (19%)

Query: 9   TAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-----------------QGLQ 51
           + H  T V H+   +F +  E  L++A    I +  L P                   L+
Sbjct: 7   STHPATGVEHAITCHFFNRNEKCLVVAGANVIRVFRLIPDVDMTRREKYTETRPPKMKLE 66

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G I +++     G  +D L ++    K  V+++D +  +L T ++    +  
Sbjct: 67  CLTQYTLHGNIMSMQAVHLIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEE 126

Query: 112 GRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF-------------------DNKG 148
            +   T++  I I+  DP+ R   + ++     V+PF                    NK 
Sbjct: 127 IKDGWTNHHHIPIVRVDPEGRCAVMLIFGRKLVVLPFRKDPSLDDGDLLDSAKLTSTNKT 186

Query: 149 QLKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYEVAL 197
            +  ++ I L+ L+     V+D++FL+G  +PT+++LY+  +        R      VA+
Sbjct: 187 PILSSYMIVLKTLEEKMDNVIDLQFLHGYYEPTLLILYEPVRTFSGRIAVRQDTCAMVAI 246

Query: 198 K---DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS------------- 241
                +      WS +NL       +PV  PL G LI+   +++Y +             
Sbjct: 247 SLNIQQRVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAVNSLIYLNQSIPPYGVSLNSL 306

Query: 242 ANAFKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGL 292
           A++    P++P   +   ++  +GS        R ++   +G L++L +       V G 
Sbjct: 307 ADSSTNFPLKP---QEGVKMSLEGSQVAFISADRLVISLKSGELYVLSLFADSMRSVRGF 363

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
             +    + + S +   ++  +++GS  G+S L++ 
Sbjct: 364 HFDKAAASVLTSCVCMCEDNYLFLGSRLGNSLLLRF 399



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 20/154 (12%)

Query: 337 SYV-EVLERYVNLGPIVDFCVVD--------LERQGQG-QVVTCSGAYKDGSLRIVRNGI 386
           SY+ EV +  +N+GP  +  + +        L+ Q    ++VT SG  K+G+L +++  I
Sbjct: 467 SYIFEVCDSLLNIGPCGNISMGEPAFLSEEFLQNQDPDVELVTTSGYGKNGALCVLQRSI 526

Query: 387 GINEQASVELQGIKGMWSL-------RSSTDDPFDTFLVVSFISETRILAMNLEDELEET 439
                 + +L G + MW++          T++    FL++S   E   + +    E+ E 
Sbjct: 527 RPQVVTTFQLPGCEDMWTVIGIVNNDEIRTEEGSHAFLILS--QEDSTMVLQTGQEINEV 584

Query: 440 EIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 472
           +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 585 DQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 618


>gi|321475208|gb|EFX86171.1| hypothetical protein DAPPUDRAFT_313209 [Daphnia pulex]
          Length = 1260

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 143/675 (21%), Positives = 277/675 (41%), Gaps = 146/675 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPML--------------- 54
           ++  T+V H+    F   +E NL++A    + +  L P   + ML               
Sbjct: 8   SYPATSVEHAIYCRFYGGREKNLVVAGANVLRVFRLIPNTDEKMLRKESADGQPPKMKLE 67

Query: 55  ---DVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGD----- 106
                 ++G++ ++      G +QD + ++    K  ++++D  S  L T ++ +     
Sbjct: 68  CLASYNLFGKVMSIAAVSLPGSSQDTILMSFAHAKLSLIEYDPVSDNLKTLSLHNFEVVS 127

Query: 107 -VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF------DNKGQLKEAFNIRLE 159
            + + IG      +I + DP+ R   L ++     ++PF      D+   L  ++ I+L 
Sbjct: 128 ILDEGIGSNHKIPEIRV-DPEGRCAALLIFRNTLAILPFRKDSAHDSNVTLS-SYIIKLT 185

Query: 160 ELQ-----VLDIKFLYGCAKPTIVVLYQD-----NKDARHVKT---YEVALKDKDFVEGP 206
           +L+     V+D++FL+G  +PT+++LY+       + A    T     V+L  +  V   
Sbjct: 186 DLEERVDNVIDVQFLHGYYEPTLIILYEPVGTFPGRIAVRQDTCNMVAVSLNTQQRVHPI 245

Query: 207 -WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPIRP 252
            WS N+L      L+PVP PL G LI+   +++Y +             A+   + P++P
Sbjct: 246 IWSLNSLPFDCSQLLPVPKPLGGALIMAVNSVIYVNQSVPPYGVSVNSIADHCTSFPLKP 305

Query: 253 SITKAYGRVDADGS-----RYLLGDHAGLLHLLVITHEKEK-VTGLKIELLGETSIASTI 306
                 G   A  +     R +L    G L++L +  +  + V    +E    + + + +
Sbjct: 306 YEGSRIGLDCARAAFLQYDRVVLSLKGGELYVLTLFADSMRSVRKFHLEKAAASVLTTCL 365

Query: 307 SYLDNAVVYIGSSYGDSQLIKLNLQ----------------------------------- 331
              DN  +++GS  G+S L+    +                                   
Sbjct: 366 CICDN-YLFLGSRLGNSLLLAFQTKDYNQYATPFAAKKPKMEQFSLLFDQELDHLDEEEI 424

Query: 332 -----------PDAKG-SY-VEVLERYVNLGPIVDFCV-------VDLERQGQG---QVV 368
                       D+K  SY  EV +  +N+GP     V        D +++      ++V
Sbjct: 425 DNYLYGEDHESTDSKAISYQFEVCDSLLNIGPCGQMAVGEPASTCTDFDKKSPDPDVEIV 484

Query: 369 TCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL---RSSTDDPFDTFLVVSFISET 425
           T SG  K+G++ +++  +      + EL  +  M+++   R++ D    T+L++S    T
Sbjct: 485 TTSGYGKNGAICVLQRTMKPQVVTTFELPEVSDMFTVFASRNNEDAIMHTYLLLSRADST 544

Query: 426 RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRNEWK 484
            +L      E+ E +  GF   + T+   +   N+ +VQV   SVRL+ +T+  ++ E  
Sbjct: 545 MVLQTG--QEINEMDQSGFSVTSPTILAANLGNNRFIVQVCPTSVRLLDATATVIQ-ELV 601

Query: 485 SPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENP 544
               + +  A+A+   V + T  G +       G+LT V+ +QLE     L  N      
Sbjct: 602 MDSDFLITSASASDPYVAVLTENGRI-------GLLTFVEGSQLEMIFPVLSKN------ 648

Query: 545 SYSQIAAVGMWTDIS 559
             S +  V ++ DIS
Sbjct: 649 --SPVVCVCLYRDIS 661



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 27/182 (14%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE  +P         +   K++ +  K+ KG V ++++  G L+AAI QKI  Y W L
Sbjct: 1092 VVPEPGQP---------LTKNKIKTLYAKDQKGPVAAISSVCGYLVAAIGQKI--YLWQL 1140

Query: 851  RDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
            ++D   G   + +E   H  +L +       FI+  D+ KS+S+L ++ E   +   ARD
Sbjct: 1141 KNDDLVGIAFIDTEIYIH-QLLNI-----KSFILAADVYKSVSILRFQEEYRTLCIVARD 1194

Query: 908  YNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 962
            Y    + AV+   D+  LG     AE N  L+  +   E    +   RL    ++H+G+ 
Sbjct: 1195 YQPLEVMAVDYYIDNTQLGFLVSDAEKNLILYMYQ--PEARESQGGHRLIRKADFHVGQV 1252

Query: 963  VN 964
            V+
Sbjct: 1253 VS 1254


>gi|356530945|ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 38/309 (12%)

Query: 758  STYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI---VED 810
            +T P+ + E   ++    L  + S ++     +GTAYV   E+   +GRIL+F    + D
Sbjct: 1100 ATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYV-QGEDVAARGRILLFSLGKITD 1158

Query: 811  GKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG- 866
                L++E   KE KGA+ +L +  G LL A   KI L+KW    +GT EL         
Sbjct: 1159 NPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKW----NGT-ELNGIAFFDAP 1213

Query: 867  --HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
              H+++L +    +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1214 PLHVVSLNIVK--NFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGST 1271

Query: 925  LG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF----------RHGSL 971
            L    +++N N+       + +   +  +L    E+H+G  V +F          R GS+
Sbjct: 1272 LSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGSV 1331

Query: 972  VMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                P SD      ++FGT++G IG IA L    +  L+ LQ  L   +  V GLN   +
Sbjct: 1332 ----PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAF 1387

Query: 1032 RSFNNEKKT 1040
            R F +  K 
Sbjct: 1388 RLFRSNGKA 1396



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 176/460 (38%), Gaps = 128/460 (27%)

Query: 118 GQIGIIDPDCRLIGLHLYDGLFKVI--------------PFDNKG----QLKEAFNIRLE 159
           G +  IDP  R  G+ +YD    ++               F + G    +++ ++ I L 
Sbjct: 178 GPVVKIDPQGRCGGVLIYDLQMIILKATQVGSGLVGDDDAFGSSGAVAARIESSYMINLR 237

Query: 160 EL---QVLDIKFLYGCAKPTIVVLYQDNKD-------ARHVKTYEVALKDKDFVEGP--W 207
           +L    V D  F+YG  +P +V+L++             H              + P  W
Sbjct: 238 DLDMRHVKDFTFVYGYIEPVMVILHERELTWAGRVSWTHHTCMISALSISTTLKQHPLIW 297

Query: 208 SQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIR---------PSITKAY 258
           S  NL + A  L+ VP P+ GVL+IG  TI Y S +A  A+ +            I ++ 
Sbjct: 298 SAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNNYAVTLDSSQEIPRSS 357

Query: 259 GRV--DADGSRYLLGDHA------GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLD 310
             V  DA  + +LL D A      G L LL++ ++   V  L +     + ++S I+ + 
Sbjct: 358 FNVELDAANATWLLSDVALLSTKTGELLLLMLVYDGRVVQRLDLSKSKASVLSSGITTIG 417

Query: 311 NAVVYIGSSYG-----------------------------DSQLIKLNLQPD-------- 333
           N++ ++ S  G                             D+   +L   P         
Sbjct: 418 NSLFFLASRLGDSMLVQFSCGSGVSMMSSNLKEEVGDIEVDAPSKRLRRSPSDALQDMVS 477

Query: 334 ----------------AKGSY-VEVLERYVNLGPIVDFC----------VVDLERQGQGQ 366
                           A+ S+   V +  +N+GP+ DF              + +Q   +
Sbjct: 478 GEELSLYGSATNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYE 537

Query: 367 VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW-----SLRSST---------DDP 412
           +V CSG  K+GSL ++R  I       VEL G KG+W     S RS           DD 
Sbjct: 538 LVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDE 597

Query: 413 FDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
           +  +L++S   E R + +   D L E TE   +  Q +TL
Sbjct: 598 YHAYLIISL--EARTMVLETADLLSEVTESVDYYVQGKTL 635


>gi|351713968|gb|EHB16887.1| Cleavage and polyadenylation specificity factor subunit 1
            [Heterocephalus glaber]
          Length = 1440

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 192/466 (41%), Gaps = 74/466 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 969  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1028

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1029 KVYAVATSTSTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1088

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRI-----LVFIVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GR+     +  + E
Sbjct: 1089 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRVRDWERIEVVPE 1147

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1148 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1202

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1203 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1262

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1263 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1316

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1317 SEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1376

Query: 1030 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1377 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1422



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 118/631 (18%), Positives = 244/631 (38%), Gaps = 169/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL------------TPQG------LQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L            T +G      L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEGLTKNDKTTEGKSHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----------------NLQPDAKGSY 338
               + + +++  ++   +++GS  G+S L+K                    +P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASTVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           V+                                      V +  +N+GP  +  V +  
Sbjct: 424 VDSAAGWAGNKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 359 -LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------ 405
            L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++      
Sbjct: 484 FLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRK 543

Query: 406 ------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                              +  D     FL++S    T IL      E+ E +  GF +Q
Sbjct: 544 EEEETPKAEGSEQEPSAPEAQDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 601

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 GPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|224120960|ref|XP_002318462.1| predicted protein [Populus trichocarpa]
 gi|222859135|gb|EEE96682.1| predicted protein [Populus trichocarpa]
          Length = 1455

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 170/374 (45%), Gaps = 49/374 (13%)

Query: 746  VRLLD--DQTFEFISTYPLDTFEYGCSILSCSF----SDDSNVYYCVGTAYVLPEENEPT 799
            VR+L+  +  ++  +T P+ T E   ++   S     + ++     VGTAYV   E+   
Sbjct: 1091 VRILEPSNGPWQVKATIPMQTSENALTVRMVSLFNTSTKENETLLAVGTAYV-QGEDVAA 1149

Query: 800  KGRILVFIV----EDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            +GRIL+F V    E+ ++ L++E   KE KGA+ +L +  G LL A   KI L+KW    
Sbjct: 1150 RGRILLFSVVKNPENSQI-LVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT--- 1205

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
             GT            +  + +    +FI++GD+ KSI  L +K +   +   A+D+ +  
Sbjct: 1206 -GTELTGVAFSDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFASLD 1264

Query: 913  MSAVEILDDDIYLG-----AENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
              + E L D   L       + N  +F    K SE    +   +L    E+H+G  V +F
Sbjct: 1265 CFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKMSESWKGQ---KLLSRAEFHVGALVTKF 1321

Query: 967  RHGSLVMRL-------------PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
                  MRL             P SD      ++FGT++G IG IA L    +  L+ LQ
Sbjct: 1322 ------MRLQMLSPSLDRSGAAPVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQ 1375

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
              L   +  V GLN + +R F ++ K      ++ +D +++  +  +      EI++ + 
Sbjct: 1376 KKLVDAVPHVAGLNPKSFRQFRSDGKAHRPGPESIVDCEMLSYYEMIPLEEQVEIAQQIG 1435

Query: 1072 VSVEELCKRVEELT 1085
             +  ++   + +LT
Sbjct: 1436 TTRAQILSNLNDLT 1449



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 201/517 (38%), Gaps = 144/517 (27%)

Query: 75  QDFLFIATERYKFCVLQWDAESSELITRAM----GDVSDRIGRPTDN---GQIGIIDPDC 127
           +D + +A +  K  VL++D     L T +M    G     + R  ++   G +  +DP  
Sbjct: 130 RDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPDWRHLKRGRESFARGPLVKVDPQG 189

Query: 128 RLIGLHLYDGLFKVIPFDNKG----QLKEAF----------------NIR-LEELQVLDI 166
           R  G+ +YD    ++     G    Q ++AF                N+R L+   V D 
Sbjct: 190 RCGGVLVYDLQMIILKAAQAGSALVQDEDAFGSGAAISAHIASSYIINLRDLDMKHVKDF 249

Query: 167 KFLYGCAKPTIVVLYQDNKDA------RHVKTYEVALKDKDFVEGP---WSQNNLDNGAD 217
            F++   +P +VVL++           +H      AL     ++ P   WS  NL + A 
Sbjct: 250 IFVHDYIEPVVVVLHERELTWAGRVVWKHHTCMISALSISTTLKQPTLIWSIGNLPHDAY 309

Query: 218 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIR------------PSITKAYGRVDADG 265
            L+ VP P+ GVL+IG  TI Y S +A  A+ +             P  T +   +DA  
Sbjct: 310 KLLAVPSPIGGVLVIGVNTIHYHSESASCALALNSYAASVDSSQELPRATFSV-ELDAAN 368

Query: 266 SRYLLGDHA------GLLHLLVITHEKEKVTGLKIELLGETSIASTISYL---------- 309
           + +LL D A      G L LL + ++   V  L +     + + S I+ L          
Sbjct: 369 ATWLLKDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTLGNSFFFLGSR 428

Query: 310 --DNAVVYIGSSYGDSQL----------IKLNLQPDAK---------------------- 335
             D+ +V   S  G S L          I+ +L P AK                      
Sbjct: 429 LGDSLLVQFTSGLGSSMLSPGLKEEVGDIEGDL-PSAKRLKVSSSDALQDMVSGEELSLY 487

Query: 336 ---------GSYVEVLERY--------VNLGPIVDFC----------VVDLERQGQGQVV 368
                       V V++ +        +N+GP+ DF              + +Q   ++V
Sbjct: 488 SSAPNNAESSQVVSVIKTFSFTVRDSLINVGPLKDFAYGLRINADANATGISKQSNYELV 547

Query: 369 TCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW-------------SLRSSTDDPFDT 415
            CSG  K+G+L +++  I       VEL G KG+W             SL+ ++DD +  
Sbjct: 548 CCSGHGKNGALCVLQQSIRPEMITEVELPGCKGIWTVYHKNARIHSVDSLKMASDDEYHA 607

Query: 416 FLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
           +L++S   E R + +   D L E TE   +  Q +T+
Sbjct: 608 YLIISM--EARTMVLETADHLTEVTESVDYFVQGRTI 642


>gi|195150431|ref|XP_002016158.1| GL10645 [Drosophila persimilis]
 gi|194110005|gb|EDW32048.1| GL10645 [Drosophila persimilis]
          Length = 1459

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 191/434 (44%), Gaps = 60/434 (13%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESEMHFVRLLDDQ 752
            +R +PL   PR++ +  ++R + + +              +++  +EES        +  
Sbjct: 1030 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPNGS 1089

Query: 753  TFEFISTYP------------LDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
             FE +   P             + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1090 QFEMVLISPETWEIVPDASIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1148

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1149 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI- 1207

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1208 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEHRTLSLA 1263

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   +  +L    +YHL
Sbjct: 1264 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQ--KLIRKADYHL 1321

Query: 960  GEFVN-RFR---HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            G+ VN  FR   H   V +           V++GT++G +G    LP + Y     LQ  
Sbjct: 1322 GQVVNTMFRVQCHQRGVHQRQPFLYENKHFVVYGTLDGGLGYCLPLPEKVYRRFLMLQNV 1381

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            L      + GLN +++R+  + KK     ++  +DGDLI S+  L  +  +E++K +   
Sbjct: 1382 LLSYQDHLCGLNPKEFRTLKSFKKQGLNPSRCIIDGDLIWSYRLLPNSDRNEVAKKIGTR 1441

Query: 1074 VEELCKRVEELTRL 1087
             EE+   + E+ RL
Sbjct: 1442 TEEILSDLLEIERL 1455



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 85/400 (21%), Positives = 161/400 (40%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP--MLDVP--- 57
            H  T+V  +    F +  E NL++A    ++++ ++P       Q L P  M   P   
Sbjct: 8   THPATSVEFAISCRFFNNLEENLVVAGANMLKVYRISPNVEAGQRQKLNPNEMRIAPKMR 67

Query: 58  --------IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
                   +YG + +L+     G  QD L ++ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYFLYGNVMSLQCVSLAGAMQDALLVSFKDAKLSVLQHDPDTYALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 EDIRGGWTGRYFVPVVRVDPDARCAVMLVYGKRLVVLPFRKDNSLDEIELTDVKPFKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L+EL      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVSRTPIMASYLITLKELDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCSGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCFQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   + P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTSFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGELYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I    +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVCHSEYIFLGSRLGNSLLL 405



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 488 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFV 547

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL G   +W++      ++S  D  D F+++S  + T  L +    E+ 
Sbjct: 548 NCINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHD-FMLLSQSNST--LVLQTGQEIN 604

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 605 EIENTGFTVNQATIFVGNLGQQRFIVQVTTRHVRLLQGT 643


>gi|356559917|ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 30/305 (9%)

Query: 758  STYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV---ED 810
            +T P+ + E   ++    L  + S ++     +GTAYV   E+   +GRIL+F +    D
Sbjct: 1098 ATIPMQSSENALTVRMVTLVNTTSKENETLLAIGTAYV-QGEDVAARGRILLFSLGKNTD 1156

Query: 811  GKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG- 866
                L++E   KE KGA+ +L +  G LL A   KI L+KW    +GT EL         
Sbjct: 1157 NPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKW----NGT-ELNGIAFFDAP 1211

Query: 867  --HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
              H+++L +    +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1212 PLHVVSLNIVK--NFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGST 1269

Query: 925  LG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR------L 975
            L    +++N N+       + +   +  +L    E+H+G  V +F    ++        +
Sbjct: 1270 LSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGAV 1329

Query: 976  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
            P SD      ++FGT++G IG IA L    +  L+ LQ  L   +  V GLN   +R F 
Sbjct: 1330 PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFR 1389

Query: 1036 NEKKT 1040
            +  K 
Sbjct: 1390 SNGKA 1394



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 122/536 (22%), Positives = 208/536 (38%), Gaps = 140/536 (26%)

Query: 118 GQIGIIDPDCRLIGLHLYDGLFKVIPFDNKG------------------QLKEAFNIRLE 159
           G +  +DP  R  G+ +YD    ++     G                  +++ ++ I L 
Sbjct: 176 GPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSYMINLR 235

Query: 160 EL---QVLDIKFLYGCAKPTIVVLYQ------DNKDARHVKTYEVALK-DKDFVEGP--W 207
           +L    V D  F++G  +P +V+L++           +H      AL       + P  W
Sbjct: 236 DLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIW 295

Query: 208 SQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRP---------SITKAY 258
           S  NL + A  L+ VP P+ GVL+I   TI Y S +A  A+ +            I ++ 
Sbjct: 296 SAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNSYAVTLDSSQEIPRSS 355

Query: 259 GRV--DADGSRYLLGDHA------GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLD 310
             V  DA  + +LL D A      G L LL + ++   V  L +     + ++S I+ + 
Sbjct: 356 FNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIG 415

Query: 311 NAVVYIGSSYGDSQLIKL------------------NLQPDA------------------ 334
           N++ ++ S  GDS L++                   +++ DA                  
Sbjct: 416 NSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDIEADAPSKRLRRSPSDALQDMVS 475

Query: 335 ------------------KGSYVEVLERYVNLGPIVDFC----------VVDLERQGQGQ 366
                             K     V +  +N+GP+ DF              + +Q   +
Sbjct: 476 GEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYE 535

Query: 367 VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW-----SLRSST---------DDP 412
           +V CSG  K+GSL ++R  I       VEL G KG+W     S RS           DD 
Sbjct: 536 LVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDE 595

Query: 413 FDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTLFCHD--------AIYNQLVQ 463
           +  +L++S   E R + +   D L E TE   +  Q +TL   +         +Y +  +
Sbjct: 596 YHAYLIISL--EARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQVYERGAR 653

Query: 464 VTSGS--VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 517
           +  GS   + VS  +  L +   S    +++V+ A+   +L  + G   + L IGD
Sbjct: 654 ILDGSFMTQDVSFGASNLESGSASDSAIALSVSIADPFVLLRMSDGS--IRLLIGD 707


>gi|71407487|ref|XP_806209.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
            Brener]
 gi|70869885|gb|EAN84358.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 508

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 140/340 (41%), Gaps = 62/340 (18%)

Query: 787  GTAYVLPEENEPTKGRILVFIVEDGKL-------QLIAEKETKGAVYS---LNAFNGKLL 836
            GT +  P+E  P   R + + VE GKL       + I  K+ +GA+     +  + G++ 
Sbjct: 92   GTTFAFPDEQLPRSSRFIWYCVEQGKLISERPQLRQIGSKDVEGALQCCCIVPNYVGRIA 151

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHH--GHILALYVQTRGDFIVVGDLMKSISLLIY 894
              IN  I LY W   D      ++ C       +L ++ Q    ++V  D   S   +  
Sbjct: 152  LGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIF-QGDASYMVAFDARHSCFFIQV 210

Query: 895  KHEEGAIEERARDYNANW-MSAVEILDDDIY--LGAENNFNLFTVRK---------NSEG 942
               +G++E  ARD      M        +IY     ++ +N F + +         N+  
Sbjct: 211  DTIQGSLEIVARDSEPRGVMDGAVFQLGNIYNICFGDDYYNFFCLSRGASTLPSVSNATS 270

Query: 943  ATDEERGRLEVVGEYHLGEFVNRFRHGS--------LVMRLPDSDVGQI--PTVIFGTVN 992
            AT    G+LE   +YHLG+ V   + GS        + + +P + +  I  P V+FGT +
Sbjct: 271  ATVSS-GKLETSAQYHLGDMVTAMQLGSFAPCSVTNIAVPIPTTLIPGICGPQVVFGTSH 329

Query: 993  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS------------------- 1033
            G  G I  + +E YLFL+ L+  +  V+  +GG  H  +R                    
Sbjct: 330  GAFGTITPVSNETYLFLKALEVAVSSVVPALGGFEHVTYREVLRAGQERGYSRNASFENA 389

Query: 1034 -------FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
                   F+  +K   ++    GDLIESFL  S+T    I
Sbjct: 390  NVVSSGVFDKHRKRYLSRCVCSGDLIESFLTFSQTIQQRI 429


>gi|66812672|ref|XP_640515.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
 gi|60468551|gb|EAL66554.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1628

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 211/467 (45%), Gaps = 77/467 (16%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGEL----TIGTIDDIQK-LHIRSIPLGEHPRRICHQEQ 723
            V     FN+ +  D  +  +KE ++    T+ T+ + +  + IR IP      +I +  +
Sbjct: 1180 VETFTSFNNISCQDGFIYFSKEKDVIKICTLSTLMNFENDIAIRRIPTKNSCHKIAYHSE 1239

Query: 724  SRTFA-ICSLKN--QSCAEESEMHF-------VRLLD---DQTFEFISTYPLDTFE--YG 768
            ++ +  I S     Q   E+S+          ++L+D   D  ++FI ++ L   E    
Sbjct: 1240 AKCYVVIVSFPQVTQELQEDSKKPILTDDKFQIKLIDPTIDWNWKFIDSFSLQDRETVLA 1299

Query: 769  CSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE-----------DG 811
              I+S  F++   +     +  +GTA+   E+ +  KGR+LVF IV            + 
Sbjct: 1300 MKIVSLKFTEPDGITRARPFLVIGTAFTFGEDTQ-CKGRVLVFEIVSHKTQFESEELGEK 1358

Query: 812  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 871
            +L L+ EKE KG V +L++ NG LL  I  K+ + ++      T  L +   +   I   
Sbjct: 1359 RLNLLYEKEQKGPVTALSSVNGLLLMTIGPKLTVNQFY-----TGSLVTLSFYDAQIYIC 1413

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA---- 927
             + T  ++IV+GD+ KS+  L +K +   +   ++DY A  + + E + +   L      
Sbjct: 1414 SICTIKNYIVIGDMYKSVYFLQWK-DNKTLNLLSKDYQALNIFSTEFIVNQKTLSILVSD 1472

Query: 928  -ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
             + N  LF+       +   +  + E+ G        N+  +     RLP  +      V
Sbjct: 1473 LDKNILLFSFEPQDPSSRSGQINQ-EINGN-------NKNDN-----RLPKKE----QLV 1515

Query: 987  IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD---- 1042
            IFGT++G + V+  L  + YL    +Q+ L   +    GLN +Q+RSF +  +       
Sbjct: 1516 IFGTLDGGLNVLRPLDEKIYLLFYHIQSKLY-YLPQTAGLNPKQYRSFKSFSQNFHFSPS 1574

Query: 1043 -----AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                  K  LDGDLI  FL LS++    IS ++N + +E+ + ++++
Sbjct: 1575 TFHQLPKFILDGDLISKFLSLSQSEKRLISNSINSTSDEIIESLKDV 1621



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 49/223 (21%)

Query: 146 NKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFV-- 203
           N  Q KE  NI +E ++  D  FL+G  +PTI+ L++       ++T+   +  K F   
Sbjct: 273 NNNQDKEKKNIEIENVK--DFCFLHGYYEPTILFLHEP------IQTWTSRIAVKKFTCQ 324

Query: 204 -------------EGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC--------SA 242
                           W+ +N     ++L+ VP PL G L+I    + Y         + 
Sbjct: 325 MTAISLNLLTKAGSFIWNVSNFPYNCEMLVSVPEPLGGALVITANIMFYVNQTSRYGLAV 384

Query: 243 NAFKAI-------------PIRPSITKAY-----GRVDADGSRYLLGDHAGLLHLLVITH 284
           N + +I             PI  ++   +       V  +  +++     G L +  +  
Sbjct: 385 NEYASIDTSTIIGSQPFDFPIDDTLNLVFTLDRSNFVFLESDKFIGSLKGGELLIFHLIS 444

Query: 285 EKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           +   V  + +   G + + S I  L N ++++GS  GDS L++
Sbjct: 445 DGRSVQRIHVSKAGGSVLTSCICVLSNNLIFLGSRLGDSLLLQ 487


>gi|198457226|ref|XP_001360595.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
 gi|198135905|gb|EAL25170.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
          Length = 1459

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 191/434 (44%), Gaps = 60/434 (13%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESEMHFVRLLDDQ 752
            +R +PL   PR++ +  ++R + + +              +++  +EES        +  
Sbjct: 1030 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPNGS 1089

Query: 753  TFEFISTYP------------LDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
             FE +   P             + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1090 QFEMVLISPETWEIVPDASIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1148

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1149 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI- 1207

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1208 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEHRTLSLA 1263

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   +  +L    +YHL
Sbjct: 1264 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQ--KLIRKADYHL 1321

Query: 960  GEFVN-RFR---HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            G+ VN  FR   H   V +           V++GT++G +G    LP + Y     LQ  
Sbjct: 1322 GQVVNTMFRVQCHQRGVHQRQPFLYENKHFVVYGTLDGGLGYCLPLPEKVYRRFLMLQNV 1381

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            L      + GLN +++R+  + KK     ++  +DGDLI S+  L  +  +E++K +   
Sbjct: 1382 LLSYQDHLCGLNPKEFRTLKSFKKQGLNPSRCIIDGDLIWSYRLLPNSDRNEVAKKIGTR 1441

Query: 1074 VEELCKRVEELTRL 1087
             EE+   + E+ RL
Sbjct: 1442 TEEILSDLLEIERL 1455



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 85/400 (21%), Positives = 161/400 (40%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP--MLDVP--- 57
            H  T+V  +    F +  E NL++A    ++++ ++P       Q L P  M   P   
Sbjct: 8   THPATSVEFAISCRFFNNLEENLVVAGANMLKVYRISPNVEAGQRQKLNPNEMRIAPKMR 67

Query: 58  --------IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
                   +YG + +L+     G  QD L ++ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYFLYGNVMSLQCVSLAGAMQDALLVSFKDAKLSVLQHDPDTYALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 EDIRGGWTGRYFVPVVRVDPDARCAVMLVYGKRLVVLPFRKDNSLDEIELTDVKPFKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L+EL      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVSRTPIMASYLITLKELDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCFQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   + P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTSFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGELYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I    +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVCHSEYIFLGSRLGNSLLL 405



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 488 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFV 547

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL G   +W++      ++S  D  D F+++S  + T  L +    E+ 
Sbjct: 548 NCINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHD-FMLLSQSNST--LVLQTGQEIN 604

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 605 EIENTGFTVNQATIFVGNLGQQRFIVQVTTRHVRLLQGT 643


>gi|317036382|ref|XP_001398211.2| protein cft1 [Aspergillus niger CBS 513.88]
          Length = 1393

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 179/429 (41%), Gaps = 52/429 (12%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 746
            ++ + LGE    + +   S  + +  C   +    E+ E+H                 F+
Sbjct: 961  LKRVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPEDDELHPEWRNEAISFFPSARGSFI 1020

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 801
            +L+   T+  I ++ L   EY  +I + S     N +       VGTA+    E+ P++G
Sbjct: 1021 KLVSPNTWSIIDSFSLGADEYVMAIKNISLEVSENTHERKDMIVVGTAFAR-GEDIPSRG 1079

Query: 802  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
             I VF V            D KL+LI ++  KGAV +L+   G+    + Q  +     L
Sbjct: 1080 CIYVFEVVQVVPDPDHPETDRKLKLIGKEPVKGAVTALSEIGGQGFVLVAQGQKCMVRGL 1139

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            ++DG+    +      ++  +         ++GD +K +    Y  E   +   A+D + 
Sbjct: 1140 KEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGVWFAGYSEEPYKMSLFAKDLDY 1199

Query: 911  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              + A E L D   L    A+++ N+  ++ + E        RL    ++H+G F +   
Sbjct: 1200 LEVCAAEFLPDGKRLFIVVADSDCNIHVLQYDPEDPKSSNGDRLLSRSKFHMGNFASTLT 1259

Query: 968  HGSLVM----RLPDSDVG-----QIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
                 M    ++  S  G     Q P   V+  T NG +G+I  +P E Y  L  LQ+ L
Sbjct: 1260 LLPRTMVSSEKMVSSSDGMDIDNQSPLHQVLMTTQNGSLGLITCIPEESYRRLSALQSQL 1319

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
               ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+  +     E
Sbjct: 1320 TNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIAGRVGAREWE 1377

Query: 1077 LCKRVEELT 1085
            +   +E ++
Sbjct: 1378 IKADLEAIS 1386


>gi|297820284|ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323863|gb|EFH54284.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 454

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 167/371 (45%), Gaps = 58/371 (15%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRIL 804
            +R+LD +T        L   E   S+ + +F D +      VGT   +  +  P K  + 
Sbjct: 103  IRILDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGM--QFWPKKNLVA 160

Query: 805  VFI-----VEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 858
             FI     VE+GK L+L+ + + +G   +L  F G+LLA I   ++LY     D G + L
Sbjct: 161  GFIHIYRFVEEGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKKRL 215

Query: 859  QSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
              +C +      I++  +QT  D I VGD+ +S     Y+ +E  +   A D    W++A
Sbjct: 216  LRKCENKLFPNTIIS--IQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTA 273

Query: 916  VEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEY 957
               +D D   GA+   N++ VR                  K  +G  +    +++ + ++
Sbjct: 274  SHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQF 333

Query: 958  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNL 1016
            H+G+ V   +  S++        G   ++++GTV G IG + A    +   F   L+ ++
Sbjct: 334  HVGDVVTCLQKASMI-------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHM 386

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNV 1072
            R+    + G +H  +RS          K+ +DGDL E F    +DL R   DE+ +T   
Sbjct: 387  RQEYPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRT--- 438

Query: 1073 SVEELCKRVEE 1083
               E+ K++E+
Sbjct: 439  -PAEILKKLED 448


>gi|449524573|ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like, partial [Cucumis sativus]
          Length = 741

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 32/276 (11%)

Query: 785  CVGTAYVLPEENEPTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAA 838
             VGTAYV   E+   +GR+L+F V    D    L++E   KE KGA+ +L +  G LL A
Sbjct: 423  AVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIA 481

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG---DFIVVGDLMKSISLLIYK 895
               KI L+KW        EL     +   +  LYV +     +FI++GD+ KSI  L +K
Sbjct: 482  SGPKIILHKWT-----GAELNGIAFYD--VPPLYVVSLNIVKNFILLGDIHKSIYFLSWK 534

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGA-----ENNFNLFTVRKNSEGATDEERG- 949
             +   +   A+D+ +    A E L D   L       + N  +F     S   T+  +G 
Sbjct: 535  EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKS---TESWKGQ 591

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPD------SDVGQIPTVIFGTVNGVIGVIASLPH 1003
            +L    E+H+G  V +F    ++    D      SD      ++FGT++G IG IA L  
Sbjct: 592  KLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVSDKTNRFALLFGTLDGSIGCIAPLDE 651

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
              +  L+ LQ  L   +  VGGLN   +R F++  K
Sbjct: 652  LTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGK 687


>gi|449470342|ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Cucumis sativus]
          Length = 1504

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 32/276 (11%)

Query: 785  CVGTAYVLPEENEPTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAA 838
             VGTAYV   E+   +GR+L+F V    D    L++E   KE KGA+ +L +  G LL A
Sbjct: 1186 AVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIA 1244

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG---DFIVVGDLMKSISLLIYK 895
               KI L+KW        EL     +   +  LYV +     +FI++GD+ KSI  L +K
Sbjct: 1245 SGPKIILHKWT-----GAELNGIAFYD--VPPLYVVSLNIVKNFILLGDIHKSIYFLSWK 1297

Query: 896  HEEGAIEERARDYNANWMSAVEILDDDIYLGA-----ENNFNLFTVRKNSEGATDEERG- 949
             +   +   A+D+ +    A E L D   L       + N  +F     S   T+  +G 
Sbjct: 1298 EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKS---TESWKGQ 1354

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPD------SDVGQIPTVIFGTVNGVIGVIASLPH 1003
            +L    E+H+G  V +F    ++    D      SD      ++FGT++G IG IA L  
Sbjct: 1355 KLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVSDKTNRFALLFGTLDGSIGCIAPLDE 1414

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 1039
              +  L+ LQ  L   +  VGGLN   +R F++  K
Sbjct: 1415 LTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGK 1450



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 144/338 (42%), Gaps = 60/338 (17%)

Query: 58  IYGRIATLELFRPHG----EAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD---- 109
           ++G + ++ +    G    + +D + +  +  K  VL++D  +  L T +M         
Sbjct: 108 LHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDSTHSLRTSSMHCFDGPQWL 167

Query: 110 --RIGRPT-DNGQIGIIDPDCRLIGLHLYDGLFKVI---------------PFDNKG--- 148
             + GR +   G +  +DP  R  G+ +Y GL  +I                F N G   
Sbjct: 168 HLKRGRESFARGPVVKVDPQGRCGGVLVY-GLQMIILKASQAGSGLVVDDEAFGNTGAIS 226

Query: 149 -QLKEAFNIRLEELQVLDIK---FLYGCAKPTIVVLYQD------NKDARHVKTYEVALK 198
            +++ ++ I L +L V  +K   F++G  +P +V+L++           +H      AL 
Sbjct: 227 ARVESSYLINLRDLDVKHVKDFVFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMVSALS 286

Query: 199 -DKDFVEGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSIT 255
                 + P  WS +NL + A  L+ VP P+ GVL+I   +I Y S +A   + +     
Sbjct: 287 ISTTLKQHPLIWSASNLPHDAYKLLAVPSPIGGVLVISANSIHYNSQSASCMLALNNYAV 346

Query: 256 KAYG-----------RVDADGSRYLLGDHA------GLLHLLVITHEKEKVTGLKIELLG 298
            A              +DA  + +L+ D A      G L LL + ++   V  L +    
Sbjct: 347 SADSSQDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSK 406

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKG 336
            + + S I+ + N++ ++GS  GDS L++ +    + G
Sbjct: 407 ASVLTSGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSG 444



 Score = 47.4 bits (111), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 24/112 (21%)

Query: 341 VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
           V +  +N+GP+ DF              + +Q   ++V CSG  K+G+L I+R  I    
Sbjct: 556 VRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCILRQSIRPEM 615

Query: 391 QASVELQGIKGMWSL-----RSST---------DDPFDTFLVVSFISETRIL 428
              VEL G KG+W++     R S          DD +  +L++S  + T +L
Sbjct: 616 ITEVELPGCKGIWTVYHKNTRGSIADSSRMVPDDDEYHAYLIISLEARTMVL 667


>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
 gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
          Length = 1019

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 150/329 (45%), Gaps = 50/329 (15%)

Query: 781  NVYYCVGTAYVL-----PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 835
            N   C G   +L     P   EP  G          +L+L+     + A  +L  F G+L
Sbjct: 710  NPRVCRGGGLLLTYRLAPNPEEPMAGPT--------QLELVHATPVEEAPTALCPFQGRL 761

Query: 836  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 894
            LA + + ++LY     D G ++L  +C +     A+  +Q  G+ +VV D+ +S   L Y
Sbjct: 762  LAGVGKCLRLY-----DLGRKKLLRKCENKYIPNAIVSIQAMGNRVVVSDVQESFFFLRY 816

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD--------- 945
            K +E  +   A D    W++A  +LD +   GA+   N+  +R  S  + D         
Sbjct: 817  KRQENQLVIFADDSVPRWITASCMLDYETVAGADKFGNVSIIRLPSSISDDVDEDPTGIK 876

Query: 946  --EERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
               +RG L       +V+  +H+GE V   +  +L+        G   ++++ T++G +G
Sbjct: 877  SLWDRGWLGGSSQKADVISNFHIGETVLSLQKATLI-------PGGSESLVYVTLSGTVG 929

Query: 997  VIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 1055
            V+     HE + F + L+ ++R     + G +H  +RS          KN +DGDL E F
Sbjct: 930  VLVPFTAHEDHDFFQHLEMHMRYENPPLCGRDHLSFRS-----SYFPVKNVIDGDLCEQF 984

Query: 1056 LDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
              L  ++   I++ ++ +  E+ K++E++
Sbjct: 985  NSLDPSKQKSIAEELDRNPSEVSKKLEDI 1013



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 385 GIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443
           G+ ++E A  EL G    +W+++   D+ FD +++VSF++ T +L++   + +EE    G
Sbjct: 428 GLQVSEMAVSELPGNPNAVWTVKRKADEDFDAYIIVSFVNATLVLSIG--ETVEEVTDSG 485

Query: 444 FCSQTQTLFCHDAIYNQLVQVTSGSVR 470
           F   T TL C     + LVQ  + S R
Sbjct: 486 FLGTTPTLSCAQIGDDALVQALAMSSR 512



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 67/326 (20%), Positives = 126/326 (38%), Gaps = 80/326 (24%)

Query: 268 YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           +L     G +  + +  +++ VT +K++      +A+++  L    +++ + +G+  L +
Sbjct: 111 FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTIPVAASMCVLKTGFLFVAAEFGNHCLYQ 170

Query: 328 LN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG 363
           +                           P A  + + V E   +L P +   + DL  + 
Sbjct: 171 IARLGEEDEEPEFSSAIPLEEGDTFFFAPRALRNLLPV-EELDSLSPAMGCTIADLANED 229

Query: 364 QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFIS 423
             Q+    G      LR++R+G+  +  A V L  ++  W +    + P           
Sbjct: 230 TPQLYVACGRGPRSCLRVLRHGLEASVHAEVLLCVLE--WLIDCDQNVP----------- 276

Query: 424 ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 483
              ILA++                               QV    +R + +  R   NEW
Sbjct: 277 ---ILAVHW------------------------------QVYPEGIRHIRADKR--VNEW 301

Query: 484 KSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDIN--P 539
           ++P   ++     N  QV++A  GG LVY E+   G L E     ++  +I C+ +   P
Sbjct: 302 RTPGKKAIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTDRREMSADIICMSLASVP 361

Query: 540 IGENPSYSQIAAVGMWTDISVRIFSL 565
           +GE    S+  AVG+  D +VRI SL
Sbjct: 362 VGEQ--RSRFLAVGL-ADNTVRIISL 384


>gi|350633238|gb|EHA21604.1| hypothetical protein ASPNIDRAFT_51242 [Aspergillus niger ATCC 1015]
          Length = 1406

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/432 (22%), Positives = 179/432 (41%), Gaps = 55/432 (12%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH------------------- 744
            ++ + LGE    + +   S  + +  C   +    E+ E+H                   
Sbjct: 971  LKRVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPEDDELHPEWRNEDCLAISFFPSARG 1030

Query: 745  -FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEP 798
             F++L+   T+  I ++ L   EY  +I + S     N +       VGTA+    E+ P
Sbjct: 1031 SFIKLVSPNTWSIIDSFSLGADEYVMAIKNISLEVSENTHERKDMIVVGTAFAR-GEDIP 1089

Query: 799  TKGRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 847
            ++G I VF V            D KL+LI ++  KGAV +L+   G+    + Q  +   
Sbjct: 1090 SRGCIYVFEVVQVVPDPDHPETDRKLKLIGKEPVKGAVTALSEIGGQGFVLVAQGQKCMV 1149

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  +         ++GD +K +    Y  E   +   A+D
Sbjct: 1150 RGLKEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGVWFAGYSEEPYKMSLFAKD 1209

Query: 908  YNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
             +   + A E L D   L    A+++ N+  ++ + E        RL    ++H+G F +
Sbjct: 1210 LDYLEVCAAEFLPDGKRLFIVVADSDCNIHVLQYDPEDPKSSNGDRLLSRSKFHMGNFAS 1269

Query: 965  RFRHGSLVM----RLPDSDVG-----QIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
                    M    ++  S  G     Q P   V+  T NG +G+I  +P E Y  L  LQ
Sbjct: 1270 TLTLLPRTMVSSEKMVSSSDGMDIDNQSPLHQVLMTTQNGSLGLITCIPEESYRRLSALQ 1329

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            + L   ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+  +   
Sbjct: 1330 SQLTNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIAGRVGAR 1387

Query: 1074 VEELCKRVEELT 1085
              E+   +E ++
Sbjct: 1388 EWEIKADLEAIS 1399


>gi|302761560|ref|XP_002964202.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
 gi|300167931|gb|EFJ34535.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
          Length = 1413

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 24/315 (7%)

Query: 785  CVGTAYVLPEENEPTKGRI-LVFIVEDGK-----LQLIAEKETKGAVYSLNAFNGKLLAA 838
             +GT Y L  E+  ++GRI LV + ED        + +  KE KGA+ +L A  G LL A
Sbjct: 1103 AIGTGY-LQGEDVASRGRIILVSLGEDPSDPKVWAKELYSKELKGAISALAALQGHLLLA 1161

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            I  KI L+ W    +G+ EL         +  + +    +F++ GD  KSI  L +K E 
Sbjct: 1162 IGPKIILHTW----NGS-ELIGTAFFDAPLYVVSLNIVKNFVLFGDFHKSIYFLCWKEEG 1216

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFT-VRKNSEGATDEERGRLE 952
              +   A+D+ +    A E L D   L      +  N  +F+   KN+E    +   +L 
Sbjct: 1217 AQLVLLAKDFGSLDCYATEFLIDGSTLSLLVSDSRKNIQVFSYAPKNAESWKGQ---KLL 1273

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
               E+HLG  V +F    + ++ P S       + FGT++G IG I  L    +  L+ L
Sbjct: 1274 PRVEFHLGSHVTKFLRLQM-LQTPGSSRTNRFALCFGTLDGGIGYITPLDELTFRRLQTL 1332

Query: 1013 QTNLRKVIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
            Q  L  ++  V GLN + +R F  N E       N +D + +  +  LS  +   I++ +
Sbjct: 1333 QRKLVDLVPHVAGLNPKAYRQFQANGEHHKHGPDNTVDSEQLREYESLSLDKQVAIARQI 1392

Query: 1071 NVSVEELCKRVEELT 1085
              + +++   + +++
Sbjct: 1393 GTTRQQIFANLRDIS 1407



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 122/589 (20%), Positives = 221/589 (37%), Gaps = 136/589 (23%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD------RI 111
           I   +A L   R  G  +D + +A    KF VL +D  + +L T +M           + 
Sbjct: 114 IVDSMAILHRGRDGGRHRDAIILAFPAAKFSVLFFDDATQQLKTSSMHYFEGPEWIHLKR 173

Query: 112 GRPTDNGQ-----------IGIIDPDCRLIGLHLYDGLFKVIPFDN------KGQLKEAF 154
           GR    G             G++   C+L+ +      + ++  D+        +++ ++
Sbjct: 174 GREKFPGGPLVRADSQGRCAGVLIYKCQLVMMKAAQEAYGLVEEDDPSGNIVSARIESSY 233

Query: 155 NIRLEELQVLDIK---FLYGCAKPTIVVLYQD----------NKDARHVKTYEVALKDKD 201
            + L+EL ++ +K   FLYG  +P + +L++            +D   V    +    K 
Sbjct: 234 VVNLQELGMMHVKDFVFLYGYIEPVVAILHERELTWAGRVTFRRDTCCVTALSINTNTKK 293

Query: 202 FVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRV 261
                W Q  L   A  L+ VP P+ GVL++   +I+Y S  +   + +    T   G +
Sbjct: 294 HPR-LWFQTGLPYDAYSLLAVPSPIGGVLVLCANSILYYSQVSTCIVAVNELATPPAGSL 352

Query: 262 DADGSRY-----------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIAS 304
           +   S++                 LL    G+L  L +  +   V  L++     + ++S
Sbjct: 353 EMPRSKFSIELDAAHATWLSYDAALLSTKTGMLVHLHLIFDGRNVQRLELSKSKGSVLSS 412

Query: 305 TISYLDNAVVYIGSSYGDSQLI---------------------------KLNLQPDAKGS 337
           ++  + +   ++GS  GDS L+                           ++ L  DA   
Sbjct: 413 SLCTIGDKFFFVGSRLGDSLLVQFGSASTSNSLEHSYDGEDDIMVRPSKRMRLDDDASEQ 472

Query: 338 YV------------------EVLERYVNLGPIVDFCVVDL---ERQGQGQ-VVTCSGAYK 375
            +                   V +   N+GPI D         E+ G  Q ++ C G  K
Sbjct: 473 SLYQYKSGVSDSQKNMNFLFSVRDSLCNIGPIRDITCRSQNPSEQPGSAQDLIACCGHGK 532

Query: 376 DGSLRIVRNGIGIN--EQAS---------------VELQGIKGMWSL--RS----STDDP 412
           +GSL I+   I  +   QA+               V+L G  G+W++  RS    +  D 
Sbjct: 533 NGSLNIISRSIRPDFITQANMSLLFFAVAYALFFQVKLPGCVGVWTVYHRSGQIPAEKDE 592

Query: 413 FDTFLVVSFISETRILAM--NLEDELEETE--IEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
           +  +L++S  S T +L     L +  +  E   EG       LF       ++ QV    
Sbjct: 593 YHAYLIISLESRTMVLETGETLGEVTDSVEYYTEGPSISAGNLFGR----RRIAQVYQKG 648

Query: 469 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 517
           VR++   +R+ ++     PG ++  A+     VLL    G    L +GD
Sbjct: 649 VRILDG-ARQTQDLQVGEPGNAIESASFADPYVLLRMQDGS-CQLVVGD 695


>gi|302814354|ref|XP_002988861.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
 gi|300143432|gb|EFJ10123.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
          Length = 1413

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 24/315 (7%)

Query: 785  CVGTAYVLPEENEPTKGRI-LVFIVEDGK-----LQLIAEKETKGAVYSLNAFNGKLLAA 838
             +GT Y L  E+  ++GRI LV + ED        + +  KE KGA+ +L A  G LL A
Sbjct: 1103 AIGTGY-LQGEDVASRGRIILVSLGEDPSDPKVWAKELYSKELKGAISALAALQGHLLLA 1161

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            I  KI L+ W    +G+ EL         +  + +    +F++ GD  KSI  L +K E 
Sbjct: 1162 IGPKIILHTW----NGS-ELIGTAFFDAPLYVVSLNIVKNFVLFGDFHKSIYFLCWKEEG 1216

Query: 899  GAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFT-VRKNSEGATDEERGRLE 952
              +   A+D+ +    A E L D   L      +  N  +F+   KN+E    +   +L 
Sbjct: 1217 AQLVLLAKDFGSLDCYATEFLIDGSTLSLLVSDSRKNIQVFSYAPKNAESWKGQ---KLL 1273

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
               E+HLG  V +F    + ++ P S       + FGT++G IG I  L    +  L+ L
Sbjct: 1274 PRVEFHLGSHVTKFLRLQM-LQTPGSSRTNRFALCFGTLDGGIGYITPLDELTFRRLQTL 1332

Query: 1013 QTNLRKVIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
            Q  L  ++  V GLN + +R F  N E       N +D + +  +  LS  +   I++ +
Sbjct: 1333 QRKLVDLVPHVAGLNPKAYRQFQANGEHHKHGPDNTVDSEQLREYESLSLDKQVAIARQI 1392

Query: 1071 NVSVEELCKRVEELT 1085
              + +++   + +++
Sbjct: 1393 GTTRQQIFANLRDIS 1407



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 124/589 (21%), Positives = 220/589 (37%), Gaps = 136/589 (23%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM----GDVSDRIGR 113
           I   +A L   R  G  +D + +A    KF VL +D  + +L T +M    G     + R
Sbjct: 114 IVDSMAILHRGRDGGRHRDAIILAFPAAKFSVLFFDDATQQLKTSSMHYFEGPEWIHLKR 173

Query: 114 PTDN---GQIGIIDPDCRLIGLHLYDGLFKVI--------------PFDN--KGQLKEAF 154
             +    G +   D   R  G+ +Y     ++              P  N    +++ ++
Sbjct: 174 GREKFPGGPLVRADSQGRCAGVLIYKSQLVMMKAAQEAYGLVEEDDPSGNIVSARIESSY 233

Query: 155 NIRLEELQVLDIK---FLYGCAKPTIVVLYQD----------NKDARHVKTYEVALKDKD 201
            + L+EL ++ +K   FLYG  +P + +L++            +D   V    +    K 
Sbjct: 234 VVNLQELGMMHVKDFVFLYGYIEPVVAILHERELTWAGRVTFRRDTCCVTALSINTNTKK 293

Query: 202 FVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRV 261
                W Q  L   A  L+ VP P+ GVL++   +I+Y S  +   + +    T   G +
Sbjct: 294 HPR-LWFQTGLPYDAYSLLAVPSPIGGVLVLCANSILYYSQVSTCIVAVNELATPPAGSL 352

Query: 262 DADGSRY-----------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIAS 304
           +   S++                 LL    G+L  L +  +   V  L++     + ++S
Sbjct: 353 EMPRSKFSIELDAAHATWLSYDAALLSTKTGMLVHLHLIFDGRNVQRLELSKSKGSVLSS 412

Query: 305 TISYLDNAVVYIGSSYGDSQLI---------------------------KLNLQPDAKGS 337
           ++  + +   ++GS  GDS L+                           ++ L  DA   
Sbjct: 413 SLCTIGDMFFFVGSRLGDSLLVQFGSASTSNSLSQSYDGEDDIMVRPSKRMRLDDDANEQ 472

Query: 338 YV------------------EVLERYVNLGPIVDFCVVDL---ERQGQGQ-VVTCSGAYK 375
            +                   V +   N+GPI D         E+ G  Q ++ C G  K
Sbjct: 473 SLYQYKSAVSDSQKNMNFLFSVRDSLCNIGPIRDITGRSQNPSEQPGSAQDLIACCGHGK 532

Query: 376 DGSLRIVRNGIGIN--EQAS---------------VELQGIKGMWSL--RS----STDDP 412
           +GSL I+   I  +   QA+               V+L G  G+W++  RS    +  D 
Sbjct: 533 NGSLNIISRSIRPDFITQANMSLLFFAVAYALFFQVKLPGCVGVWTVYHRSGQIPAEKDE 592

Query: 413 FDTFLVVSFISETRILAM--NLEDELEETE--IEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
           +  +L++S  S T +L     L +  +  E   EG       LF       ++ QV    
Sbjct: 593 YHAYLIISLESRTMVLETGETLGEVTDSVEYYTEGPSISAGNLFGR----RRIAQVYQKG 648

Query: 469 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 517
           VR++   +R+ ++     PG ++  A+     VLL    G    L +GD
Sbjct: 649 VRILDG-ARQTQDLQVGEPGNAIESASFADPYVLLRMQDGS-CQLVVGD 695


>gi|255539681|ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
 gi|223550020|gb|EEF51507.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 50/404 (12%)

Query: 716  RRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQT----FEFISTYPLDTFEYGCSI 771
            + + HQ ++   +   L      EE E   VR+L+ +     ++  +T P+ + E   ++
Sbjct: 1068 QEVGHQIENHNLSSDELLQTYSVEEFE---VRILESENGGGPWQTKATIPMQSSENALTV 1124

Query: 772  ----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV----EDGKLQLIAE---KE 820
                L  + + ++     +GTAYV   E+   +GR+L+F V    E+ ++ L++E   KE
Sbjct: 1125 RVVTLFNATTKENETLLAIGTAYV-QGEDVAARGRVLLFSVVKSTENSQV-LVSEVYSKE 1182

Query: 821  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG--- 877
             KGA+ +L +  G LL A   KI L+KW     GT EL     +      LYV +     
Sbjct: 1183 LKGAISALASLQGHLLIASGPKIILHKWT----GT-ELNGVAFYDAP--PLYVASMNIVK 1235

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFN 932
            +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   L       + N  
Sbjct: 1236 NFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQ 1295

Query: 933  LFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------- 984
            +F     +    +  +G +L    E+H+G  + +F   S++    D   G  P       
Sbjct: 1296 IFYY---APKMLESWKGQKLLSRAEFHVGAHITKFIRLSMLSTSSDRS-GAAPGPDKTNR 1351

Query: 985  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT--V 1041
              ++FGT++G IG IA L    +  L+ LQ  L   +  V GLN   +R F ++ K    
Sbjct: 1352 FALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQFRSDGKVHRP 1411

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
              ++ +D +L+  F  L      EI++ +  +  ++   + +L+
Sbjct: 1412 GPESIVDCELLSHFEMLPLEEQLEIAQQVGTTRAQILSNLNDLS 1455



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 54/308 (17%)

Query: 75  QDFLFIATERYKFCVLQWDAESSELITRAMGDVSD------RIGRPT-DNGQIGIIDPDC 127
           +D + +A +  K  VL++D     L T +M           + GR +   G +  +DP  
Sbjct: 131 RDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFARGPLLKVDPQG 190

Query: 128 RLIGLHLYDGLFKVIPFDN------------------KGQLKEAFNIRLEEL---QVLDI 166
           R  G+ +YD    ++                        +++ ++ I L ++    V D 
Sbjct: 191 RCGGILVYDMQMIILRAAQASSGLVGDDDALSSGGSISARVQSSYVINLRDMDMKHVKDF 250

Query: 167 KFLYGCAKPTIVVLYQ------DNKDARHVKTYEVALKDKDFVEGP---WSQNNLDNGAD 217
            FL+   +P +V+L++           +H      AL     ++ P   WS  NL + A 
Sbjct: 251 IFLHDYIEPVVVILHERELTWAGRVSWKHHTCMISALSISTTLKQPTLIWSVVNLPHDAY 310

Query: 218 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIR---------PSITKAYGRVDADGSR- 267
            L+ VPPP+ GVL+I   TI Y S +A  A+ +            + +A   V+ D  + 
Sbjct: 311 KLLAVPPPIGGVLVICANTIHYHSESATYALALNNYAVSIDSSQELPRASFSVELDAVKA 370

Query: 268 -YLLGDHA------GLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
            +LL D A      G L LL + ++   V  L +     + + S I+ + N++ ++GS  
Sbjct: 371 AWLLNDVALLSAKNGELLLLSLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLFFLGSRL 430

Query: 321 GDSQLIKL 328
           GDS L++ 
Sbjct: 431 GDSLLVQF 438



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 27/148 (18%)

Query: 329 NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGS 378
           N +   K     V +  +N+GP+ DF              + +Q    +V CSG  K+G+
Sbjct: 494 NTESAQKSFSFAVRDSLINVGPLKDFSYGLRSNYDASATGIAKQSNYDLVCCSGHGKNGT 553

Query: 379 LRIVRNGIGINEQASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISE 424
           L I+R  I       V+L G +G+W++               ++  D +  +L++S   E
Sbjct: 554 LCILRQSIRPEMITEVDLPGCRGIWTVYHKNARGHNVDLSKMAAAADEYHAYLIISM--E 611

Query: 425 TRILAMNLEDELEE-TEIEGFCSQTQTL 451
            R + +   D L E TE   +  Q +T+
Sbjct: 612 ARTMVLETADLLSEVTESVDYFVQGRTI 639


>gi|70952260|ref|XP_745310.1| splicing factor 3b, subunit 3, 130kD [Plasmodium chabaudi chabaudi]
 gi|56525593|emb|CAH80831.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium chabaudi
           chabaudi]
          Length = 530

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 113/528 (21%), Positives = 221/528 (41%), Gaps = 72/528 (13%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIAT 64
           Y +T  KPT +T +  GNF+ P+   +I+AK   +E+     QG L  ++   I+G I +
Sbjct: 5   YHLTLQKPTAITRTVYGNFSGPKAHEIIVAKGQVLELLRADKQGKLSVIVSKDIFGIIRS 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           LE+FR  G  +D++ I ++  +  +L++D E ++ I R   +   + G R    G+   +
Sbjct: 65  LEIFRLTGSNKDYIAIGSDSGRLVILKYDDEKNDFI-RVHCETYGKSGIRRIVPGEYIAV 123

Query: 124 DPDCRLIGLHLYDG--LFKVIPFDNKGQLKEAFNIRLEELQVL---DIKFLYGCAKPTIV 178
           DP  R + L   +      ++  DNK  L  +  +   +   +    +    G   P  V
Sbjct: 124 DPKGRALMLCAIEKQKFVYILNRDNKENLTISSPLEAHKSHSICHAVVGLNVGFENPMFV 183

Query: 179 VLYQDNKDA-RHVKTYEVAL-----KDKDFVEGP------WSQN------------NLDN 214
            + Q+ +   + V    + L     +D+  +E P      W  +             +D 
Sbjct: 184 SIEQNYETLDKEVTNGNIQLSSNPNEDQQIMEYPKKGLCFWEMDLGLNHVIKKHTIPIDI 243

Query: 215 GADLLIPVP---PPLCGVLIIGEETIVY---------CSANAFKAIPIRPSITKAYGRVD 262
            A LLIP+P       G+++  E  +VY         CS      +    +I+     + 
Sbjct: 244 TAHLLIPLPGGQQGPSGLIVCCENYLVYKKIDHDDVYCSYPRRLEVGEEKNISIVCWTIH 303

Query: 263 ADGSRY--LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
              + +  L+    G L+ + + HE   V  +  +      IA++I  L +  +++ + +
Sbjct: 304 RIKTFFFILIQSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEF 363

Query: 321 GDSQLIKLN-------------LQPDAKGSYVE----------VLERYVNLGPIVDFCVV 357
           G+    + +               P  K + +           ++++  +L PI+D  ++
Sbjct: 364 GNHFFYQFSGIGNDSNESMCTSNHPSGKNAIIAFKTQKLKNLYLVDQIYSLSPIIDMKIL 423

Query: 358 DLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTF 416
           D +     Q+    G     SLRI+++G+ I E A+ EL G  K +W+++      +D +
Sbjct: 424 DAKNSSLPQIYALCGRGPRSSLRILQHGLSIEELANNELPGKPKYIWTIKKDNSSEYDGY 483

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           ++VSF   T IL +   + +EE       +   T+  +    N  +QV
Sbjct: 484 IIVSFEGNTLILEIG--ETVEEVYDSLLLTNVTTIHINLLYDNSFIQV 529


>gi|168021793|ref|XP_001763425.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685218|gb|EDQ71614.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1452

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 22/322 (6%)

Query: 777  SDDSNVYYCVGTAYVLPEENEPTKGRI-LVFIVEDGK-----LQLIAEKETKGAVYSLNA 830
            +D +     +GT+YV   E+   KGRI LV + +D +      + +  KE KG++ ++ +
Sbjct: 1134 TDQTQTLLAIGTSYV-QGEDVAAKGRIILVSVGKDPQDPGSWAREVYSKELKGSISAIAS 1192

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 890
              G LL AI  KI L+ W    +G+ EL         +  + +    +FI+ GD+ KSI 
Sbjct: 1193 LQGHLLIAIGPKIILHSW----NGS-ELNGAAFFDAPLYVVSLNIVKNFILFGDIHKSIY 1247

Query: 891  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATD 945
             L +K +   +   A+D+ +    A E L D   L      +  N  +F+    S  +  
Sbjct: 1248 FLCWKEDGAQLTLLAKDFGSLDCYATEFLIDGSTLSLLVSDSRKNLQIFSYAPKSMESWK 1307

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 1005
             ++  L    E+HLG  VN+F H   ++  P S       V+FGT++G I  +A L    
Sbjct: 1308 GQK--LLSRAEFHLGAHVNKF-HRLQMLPTPGSARSNRYAVLFGTLDGAIDYLAPLDELT 1364

Query: 1006 YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRM 1063
            +  L  LQ  L   +  V G+N   +R F  + K       N +D +L+  +  L     
Sbjct: 1365 FRRLHTLQRKLVDCVSHVAGVNPRAFRQFRCDGKAHRPGPDNIVDCELLSHYDMLPLDEQ 1424

Query: 1064 DEISKTMNVSVEELCKRVEELT 1085
             EI++ +  +   +   + +L 
Sbjct: 1425 LEIARQIGTTRAHVLSNLRDLA 1446



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 133/362 (36%), Gaps = 98/362 (27%)

Query: 207 WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAI-----PIRPSITKAYGR- 260
           WS  NL   A  L+ VP P+ GVL+    ++ Y S +   A+      + P  +  Y R 
Sbjct: 315 WSATNLPYDAYKLLAVPAPIGGVLVFCANSLHYHSQSGSCALGLNEFAVAPEGSAEYPRS 374

Query: 261 ---VDADGSRY--------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYL 309
              V+ D +          L+    G+L  L + +E   V  L++     + + S +  +
Sbjct: 375 KMSVELDCAHATWVANEVALISTKNGMLLFLNLVYEGRSVQRLELTKSKASVLTSCMCTI 434

Query: 310 DNAVVYIGSSYGDSQLIKLNL-------------------QPDAKGSYVE---------- 340
                ++GS   DS L++  L                    P AK    E          
Sbjct: 435 GENFFFLGSRLADSLLVQHTLGSASGRTSSLMGDIEADLSAPAAKRLKREPSEEEEGVSA 494

Query: 341 ------------------------VLERYVNLGPIVDFC----------VVDLERQGQGQ 366
                                   V +  VN+ P+ DF              L +Q   +
Sbjct: 495 EEMSLYYSTPTASDISQKKTFTFTVRDSLVNICPLRDFAYGLRSNADQSATGLGKQSNYE 554

Query: 367 VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR--------------SSTDDP 412
           +V CSG  K+GSL ++   I  +    V L G  G+W++               +S DD 
Sbjct: 555 LVACSGHGKNGSLSVLHQSIRPDLINKVALPGCSGIWTVYHKTDRDDSNEFDFGTSEDDE 614

Query: 413 FDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVR 470
           F  +L++S   E+R + +   D L E TE   + ++  T+   +    + +VQV    +R
Sbjct: 615 FHAYLIISL--ESRTMVLETGDTLGEVTENVEYYTEGNTIAAGNLFGRRFVVQVYQNGLR 672

Query: 471 LV 472
           L+
Sbjct: 673 LL 674


>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
 gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
          Length = 1329

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 20/209 (9%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
           N+ PI+DF V+D + + + Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 410 NIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWT 469

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   T  C       LVQ+
Sbjct: 470 VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTFACGLVADGLLVQI 528

Query: 465 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
              ++RL   T          S    + W  P   S+++     + ++++T     + + 
Sbjct: 529 HQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQNLIVVSTSNPCFLSIL 587

Query: 515 IGDGI------LTEVKHAQLEYEISCLDI 537
               +      + E++   L+YE+SC+ +
Sbjct: 588 GVKSVSSQCCEIYEIQRVTLQYEVSCISV 616



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 16/126 (12%)

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQI-----------PTVIFGTVNGVIGVIASLPHEQ 1005
            Y++GE     + G  + +LP  DV +             T+I GT+ G I V A +  E+
Sbjct: 1170 YYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEE 1229

Query: 1006 YLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            Y  LE +Q  L    +   V G +H ++R   N  +   A+  LDGD++  FL+L+  + 
Sbjct: 1230 YELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ---ARKILDGDMLAQFLELTNRQQ 1286

Query: 1064 DEISKT 1069
            + +  T
Sbjct: 1287 ESVLST 1292


>gi|330799483|ref|XP_003287774.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
 gi|325082229|gb|EGC35718.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
          Length = 1453

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/496 (21%), Positives = 210/496 (42%), Gaps = 64/496 (12%)

Query: 636  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK-EVSHMCPFNSAAFPDSLAIAKEGE-- 692
            SSKN   VF    +P  I++    +   +++    +  + PF++A  P+      E +  
Sbjct: 954  SSKNNG-VFIGGQKPVWIFNEKGYIRLHSMDFDGAIVSLKPFHNADCPNGFLYYTEDKQH 1012

Query: 693  LTIGTIDDIQKLH----IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRL 748
            + IG ++ +        IR +P+     +I +  + + + +     Q   E  E     +
Sbjct: 1013 IKIGYLNGLMNFENEYAIRRVPIKLSAHKIAYHNELKCYVVVVSFPQVTQELEEDSKKPI 1072

Query: 749  LDDQTFE-------------FISTYPLDTFE--YGCSILSCSFSDD-----SNVYYCVGT 788
            L D+ F+             FI ++ L   E      I+S  F +      S  +  +GT
Sbjct: 1073 LTDEKFQIKIIDPTIDWSWRFIDSFSLQDRETVLAMKIVSLKFKESDETIKSKPFLVIGT 1132

Query: 789  AYVLPEENEPTKGRILVFIVEDGKLQ------------LIAEKETKGAVYSLNAFNGKLL 836
            A+   E+ +  KGR+LVF +   K Q            L+ EKE KG V +L++ +G LL
Sbjct: 1133 AFTFGEDTQ-CKGRVLVFEIVSHKTQFESDDLGTKRLNLLYEKEQKGPVTALSSVSGLLL 1191

Query: 837  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 896
              I  K+ + +++     T +L +   H   I    + T   +IV+GD+ KS+  L +  
Sbjct: 1192 MTIGPKLTVNQFL-----TGQLVTLSFHDAQIYICSISTIKTYIVIGDMYKSVYFLQWNG 1246

Query: 897  EEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEV 953
            ++  +   ++DY +  + + E + +   L    ++ + N+     +    T  +   L  
Sbjct: 1247 KQ--LVPLSKDYQSLNIFSTEFIVNQQTLSILVSDLDKNILLFSFDPADPTSRQGQMLLC 1304

Query: 954  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLE 1010
              ++H+G  + +F    +   +  S  G       V FGT++G + V+  L    Y    
Sbjct: 1305 KADFHIGSNIEKFVRTPMKFNIQSSSNGNNNNDQLVFFGTLDGSLNVLRPLDERMYQLFY 1364

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD---------AKNFLDGDLIESFLDLSRT 1061
             LQ+ L   +    GLN +Q+R+F +  +             K  LDGDL+  F+ L++ 
Sbjct: 1365 HLQSKLY-YLPQPAGLNAKQYRAFKSFSQNFHFSPSTIHQLPKYILDGDLLSKFVKLNQK 1423

Query: 1062 RMDEISKTMNVSVEEL 1077
                ++ ++  + +E+
Sbjct: 1424 ERRLLASSVGSNTDEI 1439



 Score = 45.1 bits (105), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 73/396 (18%), Positives = 145/396 (36%), Gaps = 88/396 (22%)

Query: 13  PTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL--------TPQ-----------GLQPM 53
           PT V      N      +NL+++K   ++++ +        T Q            L+ +
Sbjct: 13  PTGVEQCIKANLIDNDTINLVLSKNNTLQVYKIKYVKNENTTTQQKQIKKVEIKPSLELL 72

Query: 54  LDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGR 113
           +++ ++G I ++   R  GE +D L +     K  VL ++ +  +   R++    +   +
Sbjct: 73  IELKLFGTIESMASVRYPGENKDSLLLTFRDAKISVLDYNIDIMDFEIRSLHFYENDEFK 132

Query: 114 PTDNGQIGI-------IDPDCRLIGLHLYDGLFKVIPFDNKGQL---------------- 150
              NG+I         ID   R   + LYD    V+PF     +                
Sbjct: 133 ---NGRIHFKHPPILKIDTQQRCATMLLYDRNIVVLPFKQISSILDDEDEEEKDEEDEKE 189

Query: 151 -KEAFNIRLEELQVL----DIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALK------- 198
              A     EE        +  FLYG  +PTI+ L++         T  +A+K       
Sbjct: 190 NDNANQDYTEEFDDDDDDNNFCFLYGYYEPTILFLHE----PSQTWTSRIAVKRLTSQLT 245

Query: 199 ------DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC--------SANA 244
                         W  +N+    D L+ VP PL G L+I    + +         + N 
Sbjct: 246 AISINFSTKLASIIWHTSNMPYNCDQLVSVPEPLSGALVITPNIMFHVNQTSKYGLAVNE 305

Query: 245 FKAI--------PIRPSITKAY-----GRVDADGSRYLLGDHAGLLHLLVITHEKEKVTG 291
           +  I        P+  ++   +       V  +  +++     G L +  +  +   V  
Sbjct: 306 YANIDIGDKFEFPLDETLNLVFTLDRSNFVFLEADKFIGSLKGGELLIFHLISDGRTVQR 365

Query: 292 LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           + +   G + +A+ +  + + ++++GS  GDS L++
Sbjct: 366 IHVSKAGGSVLATCMCVVSDNLLFLGSRLGDSLLLQ 401


>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
 gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
 gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
 gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
          Length = 1379

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 20/209 (9%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
           N+ PI+DF V+D + + + Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 468 NIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWT 527

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   T  C       LVQ+
Sbjct: 528 VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTFACGLVADGLLVQI 586

Query: 465 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
              ++RL   T          S    + W  P   S+++     + ++++T     + + 
Sbjct: 587 HQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQNLIVVSTSNPCFLSIL 645

Query: 515 IGDGI------LTEVKHAQLEYEISCLDI 537
               +      + E++   L+YE+SC+ +
Sbjct: 646 GVKSVSSQCCEIYEIQRVTLQYEVSCISV 674



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 16/126 (12%)

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQI-----------PTVIFGTVNGVIGVIASLPHEQ 1005
            Y++GE     + G  + +LP  DV +             T+I GT+ G I V A +  E+
Sbjct: 1220 YYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEE 1279

Query: 1006 YLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            Y  LE +Q  L    +   V G +H ++R   N  +   A+  LDGD++  FL+L+  + 
Sbjct: 1280 YELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ---ARKILDGDMLAQFLELTNRQQ 1336

Query: 1064 DEISKT 1069
            + +  T
Sbjct: 1337 ESVLST 1342


>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
 gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1331

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 20/209 (9%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
           N+ PI+DF V+D + + + Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 440 NIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWT 499

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   T  C       LVQ+
Sbjct: 500 VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTFACGLVADGLLVQI 558

Query: 465 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
              ++RL   T          S    + W  P   S+++     + ++++T     + + 
Sbjct: 559 HQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQNLIVVSTSNPCFLSIL 617

Query: 515 IGDGI------LTEVKHAQLEYEISCLDI 537
               +      + E++   L+YE+SC+ +
Sbjct: 618 GVKSVSSQCCEIYEIQRVTLQYEVSCISV 646



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 16/126 (12%)

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQI-----------PTVIFGTVNGVIGVIASLPHEQ 1005
            Y++GE     + G  + +LP  DV +             T+I GT+ G I V A +  E+
Sbjct: 1172 YYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEE 1231

Query: 1006 YLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 1063
            Y  LE +Q  L    +   V G +H ++R   N  +   A+  LDGD++  FL+L+  + 
Sbjct: 1232 YELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ---ARKILDGDMLAQFLELTNRQQ 1288

Query: 1064 DEISKT 1069
            + +  T
Sbjct: 1289 ESVLST 1294


>gi|308459872|ref|XP_003092248.1| CRE-CPSF-1 protein [Caenorhabditis remanei]
 gi|308253976|gb|EFO97928.1| CRE-CPSF-1 protein [Caenorhabditis remanei]
          Length = 1448

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 146/312 (46%), Gaps = 29/312 (9%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE ++PT  R         K++++ +KE KG V  L A NG LL+ + QK+  + W  
Sbjct: 1147 VVPEPDQPTSNR---------KIKVLFDKEQKGPVTGLCAINGLLLSGMGQKV--FIWQF 1195

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD--Y 908
            +D+    L S    H ++  L+  +     +  D  +S+SL+ ++ E  A+   +RD   
Sbjct: 1196 KDNDLMGL-SFLDMHYYVYQLH--SLRTIALACDARESMSLIRFQEENKAMSIASRDDRR 1252

Query: 909  NANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 965
             A    A + + D  +LG   ++ N N+     + E        RL V    ++G  VN 
Sbjct: 1253 TAKPPMAAQFVVDGAHLGFLLSDENGNITLFNYSPEAPESNGGERLTVRAAMNIGTNVNA 1312

Query: 966  FR----HGSLVMRLPDSD---VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            F     H SL+    D +   V Q  + IFG+++G  G +  L  + Y  L  LQT +  
Sbjct: 1313 FLRVKGHTSLLNLQSDEEKESVEQRMSTIFGSLDGSFGFVRPLSEKSYRRLHFLQTFIGS 1372

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            V   + GL+ +  RS    +  V   +A+N +DGD++E +L LS     ++++ + V   
Sbjct: 1373 VTPQIAGLHIKGARSARPAQPIVNGRNARNLIDGDVVEQYLHLSLYDKTDLARRLGVGRY 1432

Query: 1076 ELCKRVEELTRL 1087
             +   +  L R+
Sbjct: 1433 HIIDDLMHLRRM 1444



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 208/527 (39%), Gaps = 103/527 (19%)

Query: 124 DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTIV 178
           DP  R     +Y     ++PF    +   ++ I L+++      V D+ FL G  +PTI+
Sbjct: 145 DPSNRCAASLVYGKHIAILPFHENSKRILSYIIPLKQIDPRLDNVADMVFLDGYYEPTIL 204

Query: 179 VLYQD----------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCG 228
            LY+             D   +    V + D+ F    W   NL      L+P+P PL G
Sbjct: 205 FLYEPLQTTPGRACVRYDTMCIMGVSVNIVDRQFAV-VWQTANLPMDCTSLLPIPKPLGG 263

Query: 229 VLIIGEETIVYCSA-------------NAFKAIPIRPSITKAYGRVDADGSRYL------ 269
            L+ G  TIVY +              + F   P++  +      +D   S Y+      
Sbjct: 264 ALVFGSNTIVYLNQAVPPCGVVLNSCYDGFTKFPLK-DMKHLKMTLDCATSVYMEDGRIA 322

Query: 270 LGDHAGLLHL--LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           +G   G+L+L  LV +     V  ++   + ETSIA  ++      ++IGS  GDSQL++
Sbjct: 323 VGGRDGVLYLLRLVTSSGGATVKSMEFSRVWETSIAYCLTVCAPGHLFIGSRLGDSQLVE 382

Query: 328 LNLQPDAK-------------------------GSYVEV-----------------LERY 345
             L    K                         G  +E+                 L+R 
Sbjct: 383 YTLLKMTKESAKRQKIEKDPGEIELDEDDMELYGGAIEMQLNDDEEQILESLEFRELDRL 442

Query: 346 VNLGPIVDFC----------VVDLERQGQ-GQVVTCSGAYKDGSLRIVRNGIGINEQASV 394
            N+GP+   C          + +++R+     +VT SG  K+G+L + +  +      S 
Sbjct: 443 RNVGPVKSMCFGRPNYMSSDLAEMKRRDPVFDLVTASGHGKNGALCVHQRSLRPEIITSS 502

Query: 395 ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH 454
            L+G + +W++    ++    +L+VS +  T +L +    EL E E + F +   T+   
Sbjct: 503 ILEGAEQLWAVGRKENESH-KYLIVSRVRSTLVLELGE--ELVELEEQLFVTNEPTVAAG 559

Query: 455 DAIYNQL-VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL 513
           +     L VQVTS  + LV  T  +   E      + V  A+     V + T  G  +  
Sbjct: 560 ELSQGALAVQVTSTCIALV--TDGQQMQEVHIDSNFPVVQASIQDPYVAVLTQNGRPLLY 617

Query: 514 EIGDGILTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDIS 559
           E     L    + QL E +IS         + + +Q+ ++ ++TD S
Sbjct: 618 E-----LVMAPYVQLREIDISQTPFATFIAHNAATQLTSISVYTDAS 659


>gi|28175094|gb|AAH31197.2| Sf3b3 protein, partial [Mus musculus]
          Length = 494

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 762  LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 817
            L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 159  LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLH 218

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 874
            +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 219  KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 271

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 272  TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 331

Query: 935  TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
             VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 332  VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 388

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 389  ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 443

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 444  ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 488


>gi|26351753|dbj|BAC39513.1| unnamed protein product [Mus musculus]
          Length = 463

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 762  LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 817
            L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 128  LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLH 187

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 874
            +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 188  KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 240

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 241  TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 300

Query: 935  TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
             VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 301  VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 357

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 358  ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 412

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 413  ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 457


>gi|193785523|dbj|BAG50889.1| unnamed protein product [Homo sapiens]
          Length = 503

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 762  LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 817
            L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 168  LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLH 227

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 874
            +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 228  KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 280

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 281  TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 340

Query: 935  TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
             VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 341  VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 396

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 397  ---PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 452

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 453  ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 497


>gi|75145059|sp|Q7XWP1.2|CPSF1_ORYSJ RecName: Full=Probable cleavage and polyadenylation specificity
            factor subunit 1; AltName: Full=Cleavage and
            polyadenylation specificity factor 160 kDa subunit;
            Short=CPSF 160 kDa subunit
 gi|38345987|emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 33/353 (9%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 807
            +E  ST P+  FE   ++    L  + + ++     +GTAYVL  E+   +GR+L+F   
Sbjct: 1095 WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL-GEDVAARGRVLLFSFT 1153

Query: 808  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
              +    L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +
Sbjct: 1154 KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GAELTAVAFY 1208

Query: 865  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
               +  + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1209 DAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGST 1268

Query: 925  LG-----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            L      ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP  
Sbjct: 1269 LSLVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQ 1322

Query: 979  DVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
             +    T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F
Sbjct: 1323 GLSSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQF 1382

Query: 1035 NNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
            ++  K       N +D +L+ S+  LS     ++++ +  +  ++     +++
Sbjct: 1383 HSNGKGHRPGPDNIIDFELLCSYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 1435



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 162/397 (40%), Gaps = 109/397 (27%)

Query: 158 LEELQVLDIKFLYGCAKPTIVVLYQDNKD------ARH----VKTYEVALKDKDFVEGP- 206
           L+   V D  F++G  +P +V+L++          ++H    +  + +++  K   + P 
Sbjct: 246 LDMNHVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFSISMTLK---QHPV 302

Query: 207 -WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY------CSA--NAFKAIPI-RPSITK 256
            WS  NL + A  L+ VPPP+ GVL+I   +I Y      CS   N F + P   P I+K
Sbjct: 303 IWSAANLPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEISK 362

Query: 257 AYGRVDADGSR--------YLLGDHAGLLHLLVITHEKEKVTGL-----KIELLGE--TS 301
           +  +V+ D ++         +    AG + LL + ++   V  L     K  +L    TS
Sbjct: 363 SNFQVELDAAKATWLSNDIVMFSTKAGEMLLLTVVYDGRVVQRLDLMKSKASVLSSAVTS 422

Query: 302 IASTISYL-----DNAVVYIGSSYGDSQLIKL---------------------------- 328
           I ++  +L     D+ +V        S L  L                            
Sbjct: 423 IGNSFFFLGSRLGDSLLVQFSYCASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQD 482

Query: 329 ----------------NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQ 362
                           +L+   K SY+ V +  +N+GP+ DF            +   +Q
Sbjct: 483 VTSVEELSFQNIIAPNSLESAQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQ 541

Query: 363 GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------RSSTDDPFDT 415
              ++V CSG  K+GSL +++  I  +    VEL   +G+W++       + + D+ +  
Sbjct: 542 SNYELVCCSGHGKNGSLSVLQQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHA 601

Query: 416 FLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
           +L++S   E R + +   D+L E TE   +  Q  T+
Sbjct: 602 YLIISL--ENRTMVLETGDDLGEVTETVDYFVQASTI 636


>gi|391328522|ref|XP_003738737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Metaseiulus occidentalis]
          Length = 1500

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 178/426 (41%), Gaps = 60/426 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA----------------EESEMHFVRLL 749
            +R IP+ E P  + +   SRT+ + + K ++                   ES       +
Sbjct: 1067 MRKIPIYETPHSVNYHVDSRTYCVATSKEETATCVPKLANEDKEFEPIERESSRFIPPTV 1126

Query: 750  DDQTFEFIST----------YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPE 794
            D    E  S            P++ +E    + +   + +           VGT +   E
Sbjct: 1127 DKFALELWSPVSWEAIPNTRMPMEDWEKITCVKNVMIASEGTTSGEKGLIAVGTIHNFGE 1186

Query: 795  ENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            +    KGRIL+      + E G      K++ I  K     V +L +  G L+AA+ QK+
Sbjct: 1187 DIT-AKGRILLIDIIEVVPEPGQPLTRSKVKTILSKPQNAPVTALCSVKGHLMAAVGQKL 1245

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
             L++  L+D+   +L         I  L   +   FI++GD+ KSI+LL Y+ E   +  
Sbjct: 1246 FLFQ--LKDN---DLVGMAFLDTQIYILSAISIKSFILIGDVHKSITLLRYQEESKTLAV 1300

Query: 904  RARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
             ++D     + ++E L D+    +L  +   N+       E        RL   G++++G
Sbjct: 1301 VSKDTKPVQIYSIEYLVDNSQMAFLATDAQCNILVYMYQPENRETFGGQRLIRRGDFNIG 1360

Query: 961  EFVNR-FRHGSLVMRLPDS------DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
              +N  FR    +  +P S      D+      ++ +++G  G +  +  + Y  L  LQ
Sbjct: 1361 SRINTMFRIRCRLAEVPRSERRLLSDLEARHVTLYASLDGAFGYLLPISEKTYRRLLMLQ 1420

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
              L    + VGGLN + +R    + + +    KN +DGDLI  F+DL+     E+++ + 
Sbjct: 1421 NVLNSYCQHVGGLNPKAFRIMQTDVRALSNPQKNIVDGDLINVFMDLNFNEKAEVARKIG 1480

Query: 1072 VSVEEL 1077
             +V ++
Sbjct: 1481 TTVHQI 1486



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/394 (21%), Positives = 158/394 (40%), Gaps = 72/394 (18%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLD------- 55
           ++ Y      P+    +   +F +  E NL++A  T I+++ L   GL    D       
Sbjct: 1   MFAYHRQTQPPSVAEFAVYCHFYNLAERNLVVAGGTVIKVYRLVCDGLNETDDKAKLEHQ 60

Query: 56  --VPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGR 113
                +G I+ +E  R +      LF+  E  K  ++++D  + EL T A+  +     +
Sbjct: 61  QTFNCFGNISGMEKIRLNASRDSLLFVFKET-KISLVEYDPATHELQTLAIRSLEKEEYK 119

Query: 114 PTDNGQIG----IIDPDCRLIGLHLYDGLFKVIPF-------------------DNKGQL 150
                 +G     +DP  R   + +Y     +IPF                    N    
Sbjct: 120 EGFYNFVGNTLIKVDPLNRCAAVLIYGKHLAIIPFVKKDATDLSDPIASSKSTQTNTSGF 179

Query: 151 KEAFNIRLEEL-------QVLDIKFLYGCAKPTIVVLYQD----------NKDARHVKTY 193
            E + IRL +L        + D+ FL G  +PT+++LY+            +D   +   
Sbjct: 180 LEYYTIRLIDLDEEKGVNNIHDMTFLNGYYEPTLLLLYEPIRTWTGRVAIRQDTCSIMAL 239

Query: 194 EVALKDKDFVEGP-WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY------------- 239
            + +  +  V  P WS + L   +  ++PVP P+ GVLI+    ++Y             
Sbjct: 240 SLNVYQR--VHPPVWSFSGLPFNSFKVLPVPKPIGGVLILSVNALLYLNQSVPAYGVSLN 297

Query: 240 CSANAFKAIPIR----PSITKAYGRVD-ADGSRYLLGDHAGLLHLL-VITHEKEKVTGLK 293
           C      + P++    P +T    R +    ++ LL    G L++L + T     +   +
Sbjct: 298 CFTECSTSFPLKDQAGPPLTLDCCRCEFLSETKILLSVANGDLYVLSLFTDGMRSINQFE 357

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            + +  T++A+ IS  +   +++GS  G+S L++
Sbjct: 358 FKKIATTTVATCISLCEPGYLFVGSRIGNSLLLR 391



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 20/162 (12%)

Query: 329 NLQPDAKGSY---VEVLERYVNLGPIVDFCV--------VDLERQGQGQVVTCSGAYKDG 377
           N + D  G+    +EV +R   LGP+    +        + ++   + ++    G  + G
Sbjct: 526 NCEADCLGTTCYKLEVTDRLQTLGPVTKVAMGEPAFQSELSMKTDTEVEIFAACGHERSG 585

Query: 378 SLRIVRNGIGINEQASVELQGIKGMWSLRSST------DDPFDTFLVVSFISETRILAMN 431
           +L +++  +      + EL G   +W++RSS+      D+    FL++S    T IL   
Sbjct: 586 ALCVLQRTVRPQVITTFELPGCTDLWTVRSSSTRSPDVDEDSHQFLILSRPDSTMILQTG 645

Query: 432 LEDELEETEIEGFCSQTQTLFCHD-AIYNQLVQVTSGSVRLV 472
              E+ E +  GFC+Q+ T+F  + A    ++QV   SVRL+
Sbjct: 646 --QEINELDHSGFCTQSPTIFAGNLADGRYIIQVCPNSVRLL 685


>gi|300176207|emb|CBK23518.2| unnamed protein product [Blastocystis hominis]
          Length = 236

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 53/267 (19%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60
           M+  +YVVT  +PT VTH   G+F S   L++IIAK +++E++ ++  GL P+ DV +YG
Sbjct: 1   MASHHYVVTVQQPTTVTHCIKGHFLSSSSLDVIIAKGSKLELYSVSESGLTPIYDVSLYG 60

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTD---- 116
           RI                    ER  +C    DA + E+ T   G++ ++IGRP D    
Sbjct: 61  RIV-------------------ERKTYC----DASTREIPTVVRGNIQNKIGRPVDISFR 97

Query: 117 ---------NGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK-EAFNIRLEELQVLDI 166
                       I  +DP  R+  L LY      IP  N+  +   AF+I + EL + D+
Sbjct: 98  SHFRFLYSQRAPICRVDPTNRICLLSLY-----FIPLTNELNVAFHAFDIHINELGIRDL 152

Query: 167 KFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLD----NGADLLIPV 222
           +F+    +     +    +  R V+ Y + + ++  ++   S   LD      ++ LIPV
Sbjct: 153 QFIPSNDRSIRFAILYKFRGRRQVRVYSLDVPNRQVID--ISPRFLDLAIPETSNALIPV 210

Query: 223 PPPLCGVLIIGEETIVYCSANAFKAIP 249
                  LI     I+ C    F  IP
Sbjct: 211 DS--GSFLICSNSQILLCE---FPPIP 232


>gi|285999|dbj|BAA02805.1| KIAA0017 [Homo sapiens]
          Length = 399

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 762  LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 817
            L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 64   LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLH 123

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 874
            +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 124  KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 176

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 177  TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 236

Query: 935  TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
             VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 237  VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 293

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 294  ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 348

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 349  ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 393


>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 159/366 (43%), Gaps = 46/366 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKG--- 801
            +R+LD ++ +      L   E   SI + +F D +      VGT   L  +  P +    
Sbjct: 355  IRILDPRSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTTKGL--QFWPKRSLAS 412

Query: 802  ---RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 858
                I  F+ E   L+L+ + + +    SL  F G+LLA +   ++LY     D G R+L
Sbjct: 413  GFIHIYKFVNEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLY-----DLGKRKL 467

Query: 859  QSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 917
              +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 468  LRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAN 527

Query: 918  ILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHL 959
             +D D   GA+   N++  R                  K  +G  +    ++E + ++H+
Sbjct: 528  HIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 587

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRK 1018
            G+ V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+
Sbjct: 588  GDVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQ 640

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
                + G +H  +RS          K+ +DGDL E +  L      +I+  ++ +  E+ 
Sbjct: 641  EHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEIL 695

Query: 1079 KRVEEL 1084
            K++E++
Sbjct: 696  KKLEDI 701



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 19/300 (6%)

Query: 459 NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-D 517
           + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   
Sbjct: 2   DSLMQVHPNGIRHIREDGR--VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMT 59

Query: 518 GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 576
           G L EV+   +  +++CL I P+ E    S+  AVG + D ++RI SL PD  L      
Sbjct: 60  GQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDPDDCLQPLSVQ 118

Query: 577 GGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKTGELTDRKKVS 624
                P S+L    +       G  Y     L   L +G L    ++M TG+L+D +   
Sbjct: 119 SVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRF 178

Query: 625 LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
           LG +P  L      +   +   S RP + Y      L + ++   +     F+S    + 
Sbjct: 179 LGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEG 238

Query: 685 LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 742
           +       L I TI+ + +  +  SIPL   PR+     + +  A+  S K    AE+ E
Sbjct: 239 VVAVAGDALRIFTIERLGETFNETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQRE 298


>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 22/210 (10%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
           N+ PI+D  VVD   + Q Q+  C G   +GSLRI+RNGI +    + S   QGI  +W+
Sbjct: 458 NIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWT 517

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           ++    D + ++LV+SF+ ETR+L++ L   ++ T+  GF S T TL C       ++Q+
Sbjct: 518 IKMKRSDTYHSYLVLSFVEETRVLSVGLS-FIDVTDSVGFQSDTCTLACGLLDDGLVIQI 576

Query: 465 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
              +VRL   T          S      W  P    +++     + ++++T     +++ 
Sbjct: 577 HQNAVRLCLPTKIAHSEGIELSSPACTSW-FPDNIGISLGAVGHNVIVVSTSNPCFLFI- 634

Query: 515 IG-------DGILTEVKHAQLEYEISCLDI 537
           +G       D  + E ++ +L+YE+SC+ I
Sbjct: 635 LGVRKVSGYDYEIYEKQYLRLQYELSCISI 664



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 20/201 (9%)

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLFTVR 937
            I VGD    I    Y+ +   +E+   D +   ++   +LD D  + ++   +  + +  
Sbjct: 1139 IAVGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILSCS 1198

Query: 938  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ---IP---------T 985
               E     E   L +   Y++GE     R GS   +LP  D+ +   +P         T
Sbjct: 1199 DRLEDNASPE-CNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCAVPGSDFDSSHNT 1257

Query: 986  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDA 1043
            +I  T+ G I +   L  ++Y  LE +Q  L    +   + G +H ++RS  N    +  
Sbjct: 1258 IIASTLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENP---IGV 1314

Query: 1044 KNFLDGDLIESFLDLSRTRMD 1064
               LDGD++  FL+L+  + +
Sbjct: 1315 PKILDGDILTQFLELTSMQQE 1335


>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
           sativus]
          Length = 997

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 28/236 (11%)

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
           GD  ++KL    + +  Y   ++   N+ PI+D  VVD   + Q Q+  C G   +GSLR
Sbjct: 438 GDGMVLKLE---NGRLIYANPIQ---NIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLR 491

Query: 381 IVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
           I+RNGI +    + S   QGI  +W+++    D + ++LV+SF+ ETR+L++ L   ++ 
Sbjct: 492 IIRNGISVENLLRTSPIYQGITSIWTIKMKRSDTYHSYLVLSFVEETRVLSVGLS-FIDV 550

Query: 439 TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST----------SRELRNEWKSPPG 488
           T+  GF S T TL C       ++Q+   +VRL   T          S      W  P  
Sbjct: 551 TDSVGFQSDTCTLACGLLDDGLVIQIHQNAVRLCLPTKIAHSEGIELSSPACTSW-FPDN 609

Query: 489 YSVNVATANASQVLLATGGGHLVYLEIG-------DGILTEVKHAQLEYEISCLDI 537
             +++     + ++++T     +++ +G       D  + E ++ +L+YE+SC+ I
Sbjct: 610 IGISLGAVGHNVIVVSTSNPCFLFI-LGVRKVSGYDYEIYEKQYLRLQYELSCISI 664


>gi|322792443|gb|EFZ16427.1| hypothetical protein SINV_15375 [Solenopsis invicta]
          Length = 1532

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 149/321 (46%), Gaps = 39/321 (12%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAF 831
            Y  +GT Y   E+   ++GRIL+F I+E            + + I  KE KG + ++   
Sbjct: 1060 YIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1118

Query: 832  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
            +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++        I++ D+ KS
Sbjct: 1119 SGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI-----KSLILIADVYKS 1170

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGA 943
            ISLL ++ E   +   +RD+    +  +E L D+  LG      E+N  LF  +  S  +
Sbjct: 1171 ISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFIVADGESNLALFMYQPESRES 1230

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TVIFGTVNGVIGV 997
               +  +L    ++HLG+ VN F      +  P +D  Q          ++ +++G +G 
Sbjct: 1231 LGGQ--KLIRKADFHLGQKVNTFFRIRCRVTDPANDKKQFSGADKRHVTMYASLDGSLGY 1288

Query: 998  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN---EKKTVDAKNFLDGDLIES 1054
            I  +P + Y  L  LQ  L   I  + GLN + +R         +   A+  +DGDL+  
Sbjct: 1289 ILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKSYRHTYKSYIRNQGNPARGIIDGDLVWR 1348

Query: 1055 FLDLSRTRMDEISKTMNVSVE 1075
            +L L      +++K +   V+
Sbjct: 1349 YLFLPNNEKADLAKKIGTRVQ 1369



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/329 (20%), Positives = 139/329 (42%), Gaps = 60/329 (18%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRP--T 115
           ++G I +++     G  +D L ++    K  V+++D +  +L T ++    +   +   T
Sbjct: 41  LHGNIMSMQAVHLIGSQRDSLLLSFRDAKLSVVEYDQDIHDLRTVSLHYFEEEEIKDGWT 100

Query: 116 DNGQIGII--DPDCRLIGLHLYDGLFKVIPF-------------------DNKGQLKEAF 154
           ++  I I+  DP+ R   + ++     V+PF                    NK  +  ++
Sbjct: 101 NHHHIPIVRVDPEGRCAVMLIFGRKLVVLPFRKDPSLDDGDLLDTAKLTSSNKAPILSSY 160

Query: 155 NIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKD------ARHVKTYEVALK---DK 200
            I L+ L+     V+D++FL+G  +PT+++LY+  +        R      VA+     +
Sbjct: 161 MIVLKSLEEKMDNVIDLQFLHGYYEPTLLILYEPVRTFAGRIAVRQDTCAMVAISLNIQQ 220

Query: 201 DFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKA 247
                 WS +NL       +PV  PL G LI+   +++Y +             A+    
Sbjct: 221 RVHPIIWSVSNLPFDCYQAVPVKKPLGGTLIMAFNSLIYLNQSIPPYGVSLNSLADTSTN 280

Query: 248 IPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGE 299
            P++P      S+  A    + AD  R ++   +G L++L +       V G   +    
Sbjct: 281 FPLKPQEGVKMSLEGAQVAFISAD--RLVISLKSGELYVLSLFADSMRSVRGFHFDKAAA 338

Query: 300 TSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           + + S +   ++  +++GS  G+S L++ 
Sbjct: 339 SVLTSCVCMCEDNYLFLGSRLGNSLLLRF 367



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 21/155 (13%)

Query: 337 SYV-EVLERYVNLGPIVDFCVVD--------LERQGQG-QVVTCSGAYKDGSLRIVRNGI 386
           SY+ EV +  +N+GP  +  + +        L+ Q    ++VT SG  K+G+L +++  I
Sbjct: 435 SYIFEVCDSLLNIGPCGNISMGEPAFLSEEFLQNQDPDVELVTTSGYGKNGALCVLQRSI 494

Query: 387 GINEQASVELQGIKGMWSLRSS-TDDPFDT-------FLVVSFISETRILAMNLEDELEE 438
                 + EL G + MW++  +  +D   T       FL++S    T IL      E+ E
Sbjct: 495 RPQVVTTFELPGCEDMWTVIGTLNNDEIKTEAEGSHAFLILSQEDSTMILQTG--QEINE 552

Query: 439 TEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 472
            +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 553 VDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 587


>gi|390347522|ref|XP_003726804.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Strongylocentrotus purpuratus]
          Length = 1439

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 38/322 (11%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 831
            Y  V T +V  E+ + T+G + ++     + E G      KL+ + EK  KG V +L   
Sbjct: 1115 YVVVATTHVYSEDLQ-TRGSVYIYDCIEVVPEPGQPLTKNKLKPLYEKRQKGPVSALCEV 1173

Query: 832  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
             G LL  I QK+  Y W  +D+   G   + ++   H  +      +   FI++ D+MK 
Sbjct: 1174 MGFLLTCIGQKV--YMWQFKDNDLIGLAFIDTQIYIHNAV------SVKQFILITDVMKG 1225

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATD 945
               L Y+ ++  +   +RD     +   E + DD    +L ++ + NL     + E    
Sbjct: 1226 AYFLQYQAQDRTLSLVSRDARPLEIFGCEFMVDDKQMAFLVSDADKNLIVFHYHPEAPES 1285

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--------PTVIFGTVNGVIGV 997
                 L   G+ ++G  VN F    +  RL D    Q+          V F T++G +G+
Sbjct: 1286 HGGAYLLRRGDMNIGSAVNTFVR--VRCRLTDPSTEQVLSGPVLRRQVVFFATLDGSLGL 1343

Query: 998  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESF 1055
            +  +  + Y  L  LQ  L   +  VGGLN + +R   +  + ++   +N LDGDL+  +
Sbjct: 1344 LLPMVEKTYRRLLMLQNVLTNGLPHVGGLNPKSYRHVKSHMRNLNNPHRNILDGDLLLKY 1403

Query: 1056 LDLSRTRMDEISKTMNVSVEEL 1077
              LS    +E +K +  SV+++
Sbjct: 1404 CHLSVVERNEFAKKIGTSVDQI 1425



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 84/393 (21%), Positives = 164/393 (41%), Gaps = 85/393 (21%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL-------------TPQG-LQPMLDV 56
           H PT V H    +F SP + NL++AK + + ++ +              P+  L+     
Sbjct: 9   HPPTGVEHCVYCHFFSPDQQNLVVAKGSELTVYSMITVDSNKPTDKESKPKNKLEEAATF 68

Query: 57  PIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTD 116
            I+G++ +++  +  G  +D L ++    K  ++++D    +L T +M    +      D
Sbjct: 69  HIFGKVMSMQSAQVTGSGRDALLLSFMNAKVSIVEYDPNMHDLKTLSMHYFEE------D 122

Query: 117 NGQIGI----------IDPDCRLIGLHLYDGLFKVIPF----------------DNKGQL 150
             + G+          +DPD R   +  Y     V+PF                  +G L
Sbjct: 123 ETKEGVYRNIFHPVVKVDPDHRCAIMLTYGSKLVVLPFRRDGLVEDLDKSMSASTRRGAL 182

Query: 151 KEAFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQD-----NKDARHVKTYEVALKDK 200
             ++ IRL E+      VLDI+FL+G  +PT+++LY+       + A    T  +     
Sbjct: 183 MPSYVIRLNEMDDPICNVLDIQFLHGYYEPTLLILYEPLRTWAGRVAVRQDTCSIVALSL 242

Query: 201 DFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY---------CSANAF-- 245
           +  +      WSQ++L      +  VP P+ GVLI+   +++Y          S N+   
Sbjct: 243 NMAQKVHPIIWSQSSLPYDCMQVQAVPKPIGGVLILAVNSLLYLNQSIPPYGVSLNSLTD 302

Query: 246 --KAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKI 294
              A P++   T+   ++  D +        R  L    G +++L ++      V G  +
Sbjct: 303 WSTAFPLK---TQEGVKLSMDCTQATFISYDRLALSLKDGEIYVLTLLVDGMRSVRGFHL 359

Query: 295 ELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           +    + + + I  + +  +++GS  G+S L+K
Sbjct: 360 DKAAASVLTTCICPMGDGFLFLGSRLGNSLLLK 392


>gi|222628488|gb|EEE60620.1| hypothetical protein OsJ_14038 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 33/353 (9%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 807
            +E  ST P+  FE   ++    L  + + ++     +GTAYVL  E+   +GR+L+F   
Sbjct: 1095 WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL-GEDVAARGRVLLFSFT 1153

Query: 808  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
              +    L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +
Sbjct: 1154 KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GAELTAVAFY 1208

Query: 865  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
               +  + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1209 DAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGST 1268

Query: 925  LG-----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            L      ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP  
Sbjct: 1269 LSLVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQ 1322

Query: 979  DVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
             +    T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F
Sbjct: 1323 GLSSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQF 1382

Query: 1035 NNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
            ++  K       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 1383 HSNGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 1435



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 162/397 (40%), Gaps = 109/397 (27%)

Query: 158 LEELQVLDIKFLYGCAKPTIVVLYQDNKD------ARH----VKTYEVALKDKDFVEGP- 206
           L+   V D  F++G  +P +V+L++          ++H    +  + +++  K   + P 
Sbjct: 246 LDMNHVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFSISMTLK---QHPV 302

Query: 207 -WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY------CSA--NAFKAIPI-RPSITK 256
            WS  NL + A  L+ VPPP+ GVL+I   +I Y      CS   N F + P   P I+K
Sbjct: 303 IWSAANLPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEISK 362

Query: 257 AYGRVDADGSR--------YLLGDHAGLLHLLVITHEKEKVTGL-----KIELLGE--TS 301
           +  +V+ D ++         +    AG + LL + ++   V  L     K  +L    TS
Sbjct: 363 SNFQVELDAAKATWLSNDIVMFSTKAGEMLLLTVVYDGRVVQRLDLMKSKASVLSSAVTS 422

Query: 302 IASTISYL-----DNAVVYIGSSYGDSQLIKL---------------------------- 328
           I ++  +L     D+ +V        S L  L                            
Sbjct: 423 IGNSFFFLGSRLGDSLLVQFSYCASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVLQD 482

Query: 329 ----------------NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQ 362
                           +L+   K SY+ V +  +N+GP+ DF            +   +Q
Sbjct: 483 VTSVEELSFQNIIAPNSLESAQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQ 541

Query: 363 GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------RSSTDDPFDT 415
              ++V CSG  K+GSL +++  I  +    VEL   +G+W++       + + D+ +  
Sbjct: 542 SNYELVCCSGHGKNGSLSVLQQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHA 601

Query: 416 FLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
           +L++S   E R + +   D+L E TE   +  Q  T+
Sbjct: 602 YLIISL--ENRTMVLETGDDLGEVTETVDYFVQASTI 636


>gi|12653387|gb|AAH00463.1| SF3B3 protein [Homo sapiens]
 gi|13111947|gb|AAH03146.1| SF3B3 protein [Homo sapiens]
          Length = 399

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 762  LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 817
            L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 64   LEQNEAAFSVAVCRFSNIGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLH 123

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 874
            +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 124  KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 176

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 177  TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 236

Query: 935  TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
             VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 237  VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 293

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 294  ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 348

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 349  ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 393


>gi|53136520|emb|CAG32589.1| hypothetical protein RCJMB04_30d19 [Gallus gallus]
          Length = 503

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 162/349 (46%), Gaps = 45/349 (12%)

Query: 762  LDTFEYGCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIA 817
            L+  E   S+  C FS+    +Y  VG A  ++        G +  + + +G  KL+ + 
Sbjct: 168  LEQNEAAFSVAVCRFSNTGEEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLH 227

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 874
            +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 228  KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQ 280

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
            T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 281  TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNIC 340

Query: 935  TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 976
             VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 341  VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 396

Query: 977  DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 397  ---PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 452

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                    KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 453  ----YFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRTPPEVSKKLEDI 497


>gi|390358535|ref|XP_789715.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Strongylocentrotus purpuratus]
          Length = 1223

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 38/322 (11%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 831
            Y  V T +V  E+ + T+G + ++     + E G      KL+ + EK  KG V +L   
Sbjct: 899  YVVVATTHVYSEDLQ-TRGSVYIYDCIEVVPEPGQPLTKNKLKPLYEKRQKGPVSALCEV 957

Query: 832  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
             G LL  I QK+  Y W  +D+   G   + ++   H  +      +   FI++ D+MK 
Sbjct: 958  MGFLLTCIGQKV--YMWQFKDNDLIGLAFIDTQIYIHNAV------SVKQFILITDVMKG 1009

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATD 945
               L Y+ ++  +   +RD     +   E + DD    +L ++ + NL     + E    
Sbjct: 1010 AYFLQYQAQDRTLSLVSRDARPLEIFGCEFMVDDKQMAFLVSDADKNLIVFHYHPEAPES 1069

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--------PTVIFGTVNGVIGV 997
                 L   G+ ++G  VN F    +  RL D    Q+          V F T++G +G+
Sbjct: 1070 HGGAYLLRRGDMNIGSAVNTFVR--VRCRLTDPSTEQVLSGPVLRRQVVFFATLDGSLGL 1127

Query: 998  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA--KNFLDGDLIESF 1055
            +  +  + Y  L  LQ  L   +  VGGLN + +R   +  + ++   +N LDGDL+  +
Sbjct: 1128 LLPMVEKTYRRLLMLQNVLTNGLPHVGGLNPKSYRHVKSHMRNLNNPHRNILDGDLLLKY 1187

Query: 1056 LDLSRTRMDEISKTMNVSVEEL 1077
              LS    +E +K +  SV+++
Sbjct: 1188 CHLSVVERNEFAKKIGTSVDQI 1209


>gi|238609081|ref|XP_002397396.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
 gi|215471757|gb|EEB98326.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
          Length = 180

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 6/156 (3%)

Query: 347 NLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 404
           +L PI+D  V++ L      Q+    G     SLR +R+G+ + E  S EL GI   +W+
Sbjct: 29  SLCPILDSKVLNILPNSDTPQIFAVCGRGARSSLRTLRHGLEVEESVSSELPGIPNAVWT 88

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
            +   DDPFD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 89  TKKREDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQV 146

Query: 465 TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 500
             G +R V + SR   NEW+ P G S+  AT N  Q
Sbjct: 147 HPGGIRHVLADSRV--NEWRVPTGKSIVAATTNKRQ 180


>gi|402579535|gb|EJW73487.1| hypothetical protein WUBG_15606 [Wuchereria bancrofti]
          Length = 254

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 19/236 (8%)

Query: 409 TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 468
           T D FD+ +VVSF++ T +L++   + +EE    GF   T TL C     + L+QV    
Sbjct: 9   TLDKFDSHIVVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDG 66

Query: 469 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHA 526
           +R + +  R   NEWK+P   ++     N  QV +A  GG LVY E+   G L E  +  
Sbjct: 67  IRHIRADRRV--NEWKAPGKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERR 124

Query: 527 QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPR 583
           +L  ++ C+ ++ I E    S+   VG+  D +VRI SL     L+ ++ + L  E  P 
Sbjct: 125 ELPADVLCMSLSEIPEGELRSRFLTVGL-ADKTVRIISLDPQDCLSPLSMQALPSE--PE 181

Query: 584 SVLLCAFEGIS-------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 632
           S+++    G         +L   L +G LL   ++  TGELTD +   LGT+ + L
Sbjct: 182 SIIVLEMFGTEIQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKL 237


>gi|9794908|gb|AAF98388.1| cleavage and polyadenylation specificity factor [Drosophila
            melanogaster]
          Length = 813

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 201/435 (46%), Gaps = 62/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEES-EMHFVR---- 747
            +R +PL   PR++ +  ++R + + +              +++  +EES +  F+     
Sbjct: 384  VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRDERFIYPIGS 443

Query: 748  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 444  QFEMVLISPETWEIVPDASITFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 502

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI 
Sbjct: 503  DITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI- 561

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 562  -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 617

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 618  SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYHL 675

Query: 960  GEFVN-RFR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 676  GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQN 734

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
             L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K +  
Sbjct: 735  VLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIGT 794

Query: 1073 SVEELCKRVEELTRL 1087
              EE+   + E+ RL
Sbjct: 795  RTEEILGDLLEIERL 809


>gi|170064589|ref|XP_001867587.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167881936|gb|EDS45319.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 70

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/66 (59%), Positives = 53/66 (80%)

Query: 5  NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIAT 64
          NY+VTA KPT VT    GNFTS  +LNLI+AK +R+EI+L+TP+GL+P+ +V I G+IA 
Sbjct: 4  NYIVTAQKPTAVTACVTGNFTSTTDLNLIVAKSSRLEIYLVTPEGLRPIKEVGINGKIAV 63

Query: 65 LELFRP 70
          ++LFRP
Sbjct: 64 MKLFRP 69


>gi|422294117|gb|EKU21417.1| uv-damaged dna-binding protein [Nannochloropsis gaditana CCMP526]
          Length = 192

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 4/106 (3%)

Query: 967  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 1026
            R G  V R    D+G    ++FGT  G+IG I  +  E Y F   L   L KV+KGVGGL
Sbjct: 29   RSGGEVARGHVQDLG----LMFGTQQGMIGSILPISEEDYRFFVALTKCLNKVVKGVGGL 84

Query: 1027 NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
            +HE++R F  +K   D + F+DGDLIESFL+L   RM+E+ + M V
Sbjct: 85   SHEEYRRFLTDKAISDTQGFVDGDLIESFLELPTQRMEEVVELMRV 130


>gi|297722899|ref|NP_001173813.1| Os04g0252200 [Oryza sativa Japonica Group]
 gi|255675253|dbj|BAH92541.1| Os04g0252200, partial [Oryza sativa Japonica Group]
          Length = 432

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 33/353 (9%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 807
            +E  ST P+  FE   ++    L  + + ++     +GTAYVL E+    +GR+L+F   
Sbjct: 86   WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVLGED-VAARGRVLLFSFT 144

Query: 808  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
              +    L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +
Sbjct: 145  KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GAELTAVAFY 199

Query: 865  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
               +  + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 200  DAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGST 259

Query: 925  LG-----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDS 978
            L      ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP  
Sbjct: 260  LSLVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQ 313

Query: 979  DVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 1034
             +    T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F
Sbjct: 314  GLSSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQF 373

Query: 1035 NNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
            ++  K       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 374  HSNGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 426


>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
 gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
          Length = 1317

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/522 (21%), Positives = 209/522 (40%), Gaps = 76/522 (14%)

Query: 228 GVLIIGEETIVYCS---ANAFKAIPIRPSITKAYGRVDADGSRY--------LLGDHAGL 276
           GVL+   + I+YC    +N F   P R   +  YG +    S +        L+    G 
Sbjct: 245 GVLVCDYKGIIYCKMGHSNIFCPYPFRFGDSSEYGTMIVASSLHKLKGFFLILVQTELGD 304

Query: 277 LHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-NLQPDAK 335
           ++ + + H +  V  ++I       + +++  L +  ++    +G+    ++ +L  D  
Sbjct: 305 IYRINLIHNEGIVKEMRIYYYDTIPVCNSLLLLRSGFLFASHEFGNHTNYQIVSLGDDKT 364

Query: 336 GSYVEVL----------------------ERYVNLGPIVDFCVVDLERQGQGQVVTCSGA 373
             Y   L                      E  ++L PI D  V+D    G  Q+V   G 
Sbjct: 365 DPYTSSLPDSNDLKRVYFRPRNCQCIRKSEEILSLSPITDIKVIDTNNDGTPQIVATCGR 424

Query: 374 YKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTD-------------DPFDTFLVV 419
               +LR+   G  + E A   L G  + +W+L++  D             D    ++++
Sbjct: 425 GPRSTLRVCSYGKNVEEIAENPLPGRPRCIWTLKNGIDPSLSGSQAEAAILDNIHHYIII 484

Query: 420 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI-YNQLVQVTSGSVRLVSSTSRE 478
           SFI   R L + + + +EET    F     T++    I YN  +QV    V+L+    ++
Sbjct: 485 SFID--RSLVLTIGEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKLI---IQD 539

Query: 479 LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-----------GDGILTEVKHAQ 527
              +WK+P    +  A +N  QV LA  GG +V LE+           G G L EV   +
Sbjct: 540 RIYDWKTPDSRKIIAADSNGRQVSLALEGGLIVILELNVNGVSGITNTGMGGLVEVCRRE 599

Query: 528 LEYEISCLDINPIGENPSY-SQIAAVGMWTDISVRIFSLPDLNLITKEHL-----GGEII 581
           +  EI C+ I  +  +    S    VG  T+ ++R++ +       K+           I
Sbjct: 600 ITCEIICIGIQQLSYSGQMRSDYVVVGTSTENALRLYKIDSAEKRLKQTCTQILPNSNSI 659

Query: 582 PRSVLLCAFEGISYLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 639
           P +V L       +L+  +G   G +L+  ++   G ++D +   LG + + +     ++
Sbjct: 660 PENVQLYHSNKYGHLILFVGLTTGVILSCKVDASNGSISDPRSKYLGNRGVNICRIMRED 719

Query: 640 ---TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS 678
                 +   S RP ++ S    + ++ +  + +  + P N+
Sbjct: 720 FGGEMSLVCMSSRPWLVDSQTSGVNFTPLQYRCIDSIAPLNT 761



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 68/390 (17%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP------------ 793
            VR+++ ++ E I   PLDT E   S   C F +       +GT Y +             
Sbjct: 947  VRIVNLKSMETIQLIPLDTNEGCISACVCKFDELDLPCLVLGTVYGMKLNRGYNNNNSNN 1006

Query: 794  ---------EENEPTKGRILVFIVEDGK--LQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
                     +EN  + G  +     D     +L+     + +  +L  + G+LL  IN+ 
Sbjct: 1007 STDSAKNNDKENHDSFGAAIKIFKYDSNYNFELVHITPIENSATALTGWRGRLLVGINKT 1066

Query: 843  IQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            +++Y    K +LR    R +             +++   D I  GD+   + +  + +  
Sbjct: 1067 LRVYSLGKKRLLRKSEYRNIPQGL--------TWIKVVNDRIFAGDISNGVLVFKFNNTS 1118

Query: 899  GAIEERARDYNANWM-SAVEILD----------DDIYLG-----AENNFNL---FTVRKN 939
                  A+D    W+ SA E+LD          D+I +      A ++F+    FT   N
Sbjct: 1119 NQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSRVPAEASDDFSFVTSFTDNNN 1178

Query: 940  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 999
            S+ +      ++  V ++HLG+ V   +   L    P S       +I+GTV G IG ++
Sbjct: 1179 SQSSALMRTHQINTVAQFHLGDIVTCLQKSQLT---PTS----AEAIIYGTVLGSIGSLS 1231

Query: 1000 S-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 1058
              L +E    L KL+  LRK    +   +H  +RS+ +        N +DGD  ++F  L
Sbjct: 1232 PILNNEDIELLSKLEILLRKQKSTLLSRDHLMFRSYYSP-----VHNVIDGDFCQTFTIL 1286

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEEL-TRL 1087
                  EI+  ++V+VEE+ K++++  TRL
Sbjct: 1287 DSQIQSEIASKLDVTVEEIYKKLDDYKTRL 1316


>gi|260835071|ref|XP_002612533.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
 gi|229297910|gb|EEN68542.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
          Length = 1003

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 198/470 (42%), Gaps = 82/470 (17%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V+   PF++   P   L   + GEL I  +           +R +PL   P  + +  + 
Sbjct: 560  VTCFSPFHNVNCPKGFLYFNRGGELRISVLPTHLSYDAPWPVRKVPLRCTPHFVAYHMEC 619

Query: 725  RTFAICSLKNQSC---------------AEESEMHFVRLLDDQTFEFISTYPLD------ 763
            + +A+ +   + C                E+ + +   +LD    + +S    +      
Sbjct: 620  KVYAVAASTFEMCNRIPRMAGDEKEYDAVEKDDRYIYPMLDKFNIQLMSPVSWEIIPNTR 679

Query: 764  --TFEYGCSILSCSFSDDSN-VYYCVGTAYVL------PEENEPTKGRILVFIVEDGKLQ 814
                E   +  +CSF    N V +  G   +L      PE  +P         +   K++
Sbjct: 680  GMQLEENYAECTCSFLVGINFVLFVAGQIVILDVIEVVPEPGQP---------LTKNKIK 730

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILAL 871
             +  KE KG V +L   NG LL+AI QKI L  W  R++   G   + ++   H  I   
Sbjct: 731  ELYGKEQKGPVSALCGCNGYLLSAIGQKIFL--WEFRNNDLIGVAFIDTQVYIHTAI--- 785

Query: 872  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG----- 926
               +  +++++ D+ KSISLL Y+           D        VE   D+  +G     
Sbjct: 786  ---SIKNYVILADVFKSISLLRYQ-----------DMRPLETYCVEFFVDNAQIGFLVSD 831

Query: 927  AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF-RHGSLVM-----RLPDSD- 979
            A+ NF L++ +  +  +   +R  L    ++++G  VN F R    +M     R  D+D 
Sbjct: 832  AQKNFLLYSYQPEARESYGGQR--LVRRADFNVGSHVNTFFRVRCKIMDPSGERRRDADT 889

Query: 980  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF-NNEK 1038
            V +    +F T++G +G +  +  + Y  L  LQ  L   +    GLN + +R   +N +
Sbjct: 890  VAKRHVTMFATLDGGLGALLPMAEKTYRRLLMLQNTLMTHMPFPAGLNPKAFRMLKHNHR 949

Query: 1039 KTVDA-KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
              ++A +N LDG+L+  FL LS     E+++ +  S E + + + ++ RL
Sbjct: 950  SLINACRNILDGELLWKFLHLSVVERSELARKIGTSPETITEDLMDIDRL 999


>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
 gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
          Length = 1318

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 124/565 (21%), Positives = 232/565 (41%), Gaps = 81/565 (14%)

Query: 188 RHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVP---PPLCGVLIIGEETIVYCS--- 241
           +H+  +EV L   ++V    SQ   D+ +  LI VP       GVL+   + I+YC    
Sbjct: 204 KHLIFWEVDL-GLNYVSRKSSQVITDS-SHTLISVPGGNDGPSGVLVCDYKGIIYCKVGH 261

Query: 242 ANAFKAIPIRPSITKAYGRVDADGSRY--------LLGDHAGLLHLLVITHEKEKVTGLK 293
           +N F   P R   +  YG +    S +        L+    G ++ + + H +  V  ++
Sbjct: 262 SNIFCPYPFRFGDSSEYGTMIVASSLHKLKGFFLILVQTELGDIYRINLIHNEGIVKEMR 321

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDS---QLIKL---------NLQPDA---KGSY 338
           I       + +++  L +  ++    +G+    Q++ L         +  PD+   K  Y
Sbjct: 322 IYYYDTIPVCNSLLLLRSGFLFASHEFGNHTNYQIVSLGDDKTDPCTSSLPDSNDLKRVY 381

Query: 339 --------VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
                   +   E  ++L PI D  V+D    G  Q+V   G     +LR+   G  + E
Sbjct: 382 FRPRNCQCIRKSEEILSLSPITDIKVIDTNNDGTPQIVATCGRGPRSTLRVCSYGKNVEE 441

Query: 391 QASVELQG-IKGMWSLRSSTD-------------DPFDTFLVVSFISETRILAMNLEDEL 436
            A   L G  + +W+L++  D             D    ++++SFI   R L + + + +
Sbjct: 442 IAENPLPGRPRCIWTLKNGIDPSLSGSQAEAAILDNIHHYIIISFID--RSLVLTIGEHV 499

Query: 437 EETEIEGFCSQTQTLFCHDAI-YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 495
           EET    F     T++    I YN  +QV    V+L+    ++   +WK+P    +  A 
Sbjct: 500 EETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKLI---IQDRIYDWKTPDSRKIIAAD 556

Query: 496 ANASQVLLATGGGHLVYLEI-----------GDGILTEVKHAQLEYEISCLDINPIGENP 544
           +N  QV LA  GG +V LE+           G G L EV   ++  EI C+ I  +  + 
Sbjct: 557 SNGRQVSLALEGGLIVILELNVNGVSGITNTGIGGLVEVCRREITCEIICIGIQQLSYSG 616

Query: 545 SY-SQIAAVGMWTDISVRIFSLPDLNLITKEHL-----GGEIIPRSVLLCAFEGISYLLC 598
              S    VG  T+ ++R++ +       K+           IP +V L       +L+ 
Sbjct: 617 QMRSDYVVVGTSTENALRLYKIDSAEKRLKQTCTQILPNSNSIPENVQLYHSNKYGHLIL 676

Query: 599 ALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN---TTHVFAASDRPTVI 653
            +G   G +L+  ++   G ++D +   LG + + +     ++      +   S RP ++
Sbjct: 677 FVGLTTGVILSCKVDASNGSISDPRSKYLGNRGVNICRIMREDFGGEMSLVCMSSRPWLV 736

Query: 654 YSSNKKLLYSNVNLKEVSHMCPFNS 678
            S    + ++ +  + +  + P N+
Sbjct: 737 DSQTSGVNFTPLQYRCIDSIAPLNT 761



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 164/391 (41%), Gaps = 69/391 (17%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP------------ 793
            VR+++ ++ E I   PLDT E   S   C F +       +GT Y +             
Sbjct: 947  VRIVNLKSMETIQLIPLDTNEGCISACVCKFDELDLPCLVLGTVYGMKLNRGYNNNNNSN 1006

Query: 794  ----------EENEPTKGRILVFIVEDGK--LQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
                      +EN  + G  +     D     +L+     + +  +L  + G+LL  IN+
Sbjct: 1007 NNTDSAKNNDKENHDSFGAAIKIFKYDSNYNFELVHITPIENSATALTGWRGRLLVGINK 1066

Query: 842  KIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 897
             +++Y    K +LR    R +             +++   D I  GD+   + +  + + 
Sbjct: 1067 TLRVYSLGKKRLLRKSEYRNIPQGL--------TWIKVVNDRIFAGDISNGVLVFKFNNT 1118

Query: 898  EGAIEERARDYNANWM-SAVEILD----------DDIYLG-----AENNFNL---FTVRK 938
                   A+D    W+ SA E+LD          D+I +      A ++F+    FT   
Sbjct: 1119 SNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSRVPVEASDDFSFVTSFTDNN 1178

Query: 939  NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 998
            NS+ +      ++  V ++HLG+ V   +   L    P S       +I+GTV G IG +
Sbjct: 1179 NSQSSALMRTHQINTVAQFHLGDIVTCLQKSQLT---PTS----AEAIIYGTVLGSIGSL 1231

Query: 999  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 1057
            +  L +E    L KL+  LRK    +   +H  +RS+ +        N +DGD  ++F  
Sbjct: 1232 SPILNNEDIELLSKLEILLRKQKSTLLSRDHLMFRSYYSP-----VHNVIDGDFCQTFTI 1286

Query: 1058 LSRTRMDEISKTMNVSVEELCKRVEEL-TRL 1087
            L      EI+  ++V+VEE+ K++++  TRL
Sbjct: 1287 LDSKIQSEIASKLDVTVEEIYKKLDDYKTRL 1317


>gi|195334368|ref|XP_002033855.1| GM20208 [Drosophila sechellia]
 gi|194125825|gb|EDW47868.1| GM20208 [Drosophila sechellia]
          Length = 1455

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 64/436 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 747
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 748  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 794
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1086 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1143

Query: 795  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1144 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1203

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1204 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1258

Query: 904  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1259 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYH 1316

Query: 959  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1317 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1375

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
              L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K + 
Sbjct: 1376 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIG 1435

Query: 1072 VSVEELCKRVEELTRL 1087
               EE+   + E+ RL
Sbjct: 1436 TRTEEILGDLLEIERL 1451



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 158/400 (39%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP---------- 52
            H  T V  S    F +  + NL++A    ++++ + P       Q L P          
Sbjct: 8   THPATAVEFSIACRFFNNLDENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMR 67

Query: 53  ---MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
              +    +YG + +L+     G  +D L I+ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 DDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L +L      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   A P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I  L +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLL 405



 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N +      S EL G   +W++      +SS +D  D F+ +S  + T +L      E+ 
Sbjct: 545 NCLNPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMFLSQRNSTLVLQTG--QEIN 601

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|45552619|ref|NP_995833.1| cleavage and polyadenylation specificity factor 160, isoform A
            [Drosophila melanogaster]
 gi|18203551|sp|Q9V726.1|CPSF1_DROME RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit;
            Short=dCPSF 160
 gi|7303176|gb|AAF58240.1| cleavage and polyadenylation specificity factor 160, isoform A
            [Drosophila melanogaster]
          Length = 1455

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 64/436 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 747
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 748  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 794
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1086 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1143

Query: 795  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1144 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1203

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1204 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1258

Query: 904  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1259 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYH 1316

Query: 959  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1317 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1375

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
              L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K + 
Sbjct: 1376 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIG 1435

Query: 1072 VSVEELCKRVEELTRL 1087
               EE+   + E+ RL
Sbjct: 1436 TRTEEILGDLLEIERL 1451



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 158/400 (39%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP---------- 52
            H  T V  S    F +  + NL++A    ++++ + P       Q L P          
Sbjct: 8   THSATAVEFSIACRFFNNLDENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMR 67

Query: 53  ---MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
              +    +YG + +L+     G  +D L I+ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 DDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L +L      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   A P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I  L +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLL 405



 Score = 43.5 bits (101), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL G   +W++      +SS +D  D F+++S  + T +L      E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTG--QEIN 601

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|24653655|ref|NP_725397.1| cleavage and polyadenylation specificity factor 160, isoform B
            [Drosophila melanogaster]
 gi|15292103|gb|AAK93320.1| LD38533p [Drosophila melanogaster]
 gi|21627189|gb|AAM68553.1| cleavage and polyadenylation specificity factor 160, isoform B
            [Drosophila melanogaster]
          Length = 1420

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 64/436 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 747
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 991  VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1050

Query: 748  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 794
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1051 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1108

Query: 795  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1109 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1168

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1169 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1223

Query: 904  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1224 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYH 1281

Query: 959  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1282 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1340

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
              L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K + 
Sbjct: 1341 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIG 1400

Query: 1072 VSVEELCKRVEELTRL 1087
               EE+   + E+ RL
Sbjct: 1401 TRTEEILGDLLEIERL 1416



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 80/392 (20%), Positives = 148/392 (37%), Gaps = 104/392 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP---------- 52
            H  T V  S    F +  + NL++A    ++++ + P       Q L P          
Sbjct: 8   THSATAVEFSIACRFFNNLDENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMR 67

Query: 53  ---MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
              +    +YG + +L+     G  +D L I+ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 DDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYEV 195
                      ++ I L +L      VLDI+FL+G  +PT+++LY+  +     +K Y  
Sbjct: 188 TAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVY-- 245

Query: 196 ALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------------CSA 242
                                    P+  P+ G L++    ++Y              SA
Sbjct: 246 -------------------------PIQKPIGGCLVMTVNAVIYLNQSVPPYGVSLNSSA 280

Query: 243 NAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKEK-VTGLKI 294
           +   A P++P      S+  A +  +D D  + ++    G L++L +  +  + V     
Sbjct: 281 DNSTAFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSMRTVRNFHF 338

Query: 295 ELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
                + + S I  L +  +++GS  G+S L+
Sbjct: 339 HKAAASVLTSCICVLHSEYIFLGSRLGNSLLL 370



 Score = 43.5 bits (101), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 450 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 509

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL G   +W++      +SS +D  D F+++S  + T +L      E+ 
Sbjct: 510 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTG--QEIN 566

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 567 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 605


>gi|397615212|gb|EJK63291.1| hypothetical protein THAOC_16062, partial [Thalassiosira oceanica]
          Length = 322

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 41/305 (13%)

Query: 803  ILVFIVEDGKLQLIAEKETK------GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            +L  +V   +LQL+   +        G V +L  F G+LL  I + ++LY+      G R
Sbjct: 29   VLYRVVSGERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEM-----GKR 83

Query: 857  ELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +L  +C   G   +   +Q  GD   VGD+M+S+  + Y      +   ARD +A  ++ 
Sbjct: 84   QLLKKCELRGLPTMVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITC 143

Query: 916  VEILDDDIYLGAENNFNLFTV---RKNSEGATD-------------EERGRLEVVGEYHL 959
             E+LD +     +   N+ T+   R    GA D             +   +LE +  YH+
Sbjct: 144  QELLDVNTVAVGDKFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPKLETLCTYHV 203

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK 1018
            GE V      SLV        G   ++I+ TV G IG +      E   F   L++++R 
Sbjct: 204  GEVVTSLTRASLV-------AGGAESLIYVTVTGRIGALVPFTSREDVEFYTSLESHVRS 256

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
             +    G + + +RSF         K+ +DGDL E++  L     + I+  M  S  E+ 
Sbjct: 257  EVPRPTGRDPQSYRSFY-----CPVKHVIDGDLCEAYGGLPYEARERIADQMERSTGEVM 311

Query: 1079 KRVEE 1083
            K++E+
Sbjct: 312  KKLED 316


>gi|397627714|gb|EJK68584.1| hypothetical protein THAOC_10223, partial [Thalassiosira oceanica]
          Length = 456

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 41/305 (13%)

Query: 803  ILVFIVEDGKLQLIAEKETK------GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            +L  +V   +LQL+   +        G V +L  F G+LL  I + ++LY+      G R
Sbjct: 163  VLYRVVSGERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEM-----GKR 217

Query: 857  ELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +L  +C   G   +   +Q  GD   VGD+M+S+  + Y      +   ARD +A  ++ 
Sbjct: 218  QLLKKCELRGLPTMVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITC 277

Query: 916  VEILDDDIYLGAENNFNLFTV---RKNSEGATD-------------EERGRLEVVGEYHL 959
             E+LD +     +   N+ T+   R    GA D             +   +LE +  YH+
Sbjct: 278  QELLDVNTVAVGDKFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPKLETLCTYHV 337

Query: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK 1018
            GE V      SLV        G   ++I+ TV G IG +      E   F   L++++R 
Sbjct: 338  GEVVTSLTRASLV-------AGGAESLIYVTVTGRIGALVPFTSREDVEFYTSLESHVRS 390

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
             +    G + + +RSF         K+ +DGDL E++  L     + I+  M  S  E+ 
Sbjct: 391  EVPRPTGRDPQSYRSFY-----CPVKHVIDGDLCEAYGGLPYEARERIADQMERSTGEVM 445

Query: 1079 KRVEE 1083
            K++E+
Sbjct: 446  KKLED 450


>gi|242075246|ref|XP_002447559.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
 gi|241938742|gb|EES11887.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
          Length = 389

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 155/347 (44%), Gaps = 33/347 (9%)

Query: 759  TYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILV--FIVEDGK 812
            T P+ +FE   ++    L  + + ++     +GTAYV   E+   +GR+L+  F   +  
Sbjct: 48   TIPMQSFENALTVRIVTLQNTSTKENETLMAIGTAYV-QGEDVAARGRVLLYSFSRSENS 106

Query: 813  LQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHIL 869
              L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +   + 
Sbjct: 107  QNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GSELTAVAFYDAPLH 161

Query: 870  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG--- 926
             + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   L    
Sbjct: 162  VVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLNLLAKDFGSLDCFATEFLIDGSTLSLVV 221

Query: 927  --AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983
              ++ N  +F     +    +  +G +L    E+H+G  V++F     +  LP   +   
Sbjct: 222  SDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHVSKFLR---LQMLPTQGLASE 275

Query: 984  PT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNE 1037
             T    ++FGT++G IG IA +    +  L+ LQ  L   +  V GLN   +R F  N +
Sbjct: 276  KTNRFALVFGTLDGGIGCIAPVDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRHFKSNGK 335

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                   N +D +L+  +  LS     EI++ +  +  ++     + 
Sbjct: 336  AHRPGPDNIIDFELLSHYEMLSLEEQLEIAQQIGTTRSQILSNFSDF 382


>gi|154419018|ref|XP_001582526.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
 gi|121916762|gb|EAY21540.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
          Length = 1142

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 164/814 (20%), Positives = 328/814 (40%), Gaps = 81/814 (9%)

Query: 311  NAVVYIGSSYGDSQ--LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQ-GQV 367
            N+  YI  S  D +   ++    P+ + + +E  E +     +         R  Q G +
Sbjct: 356  NSFYYITESCEDVEEGFVEKTFSPNTENTKIEYFEGHEIKNRLTKLITAPSFRGSQLGDI 415

Query: 368  VTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---FDTFLVVSFISE 424
            ++  G++   SL+I R G+       +E+ G  G   +++   DP   +DTF+ VS  S 
Sbjct: 416  ISIHGSFNKSSLKITRKGMPTKVLKPIEIGG--GCTFVKAVKKDPLNEYDTFIFVSNEST 473

Query: 425  TRILAMNLED-ELEETEIEGFCSQTQTL--FCHDAIYN--QLVQVTSGSVRLVSSTSREL 479
            TRI     E  EL++++   F +  +T+  F   A  N   L Q+T+  +R+++   +  
Sbjct: 474  TRIFEFFEETRELKDSKESLFVTDKKTIDVFFLPAFNNTSSLAQITTEGMRIINDKEK-- 531

Query: 480  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGIL----TEVKHAQLEYEISCL 535
             ++WK      +   TAN SQ+ +      +V  E  +  L    +  K  ++  +I+ +
Sbjct: 532  -HDWKRDESSKIICVTANPSQIAIVYDDNQIVLFETDETSLPKEVSSNKVMEIAGQITSI 590

Query: 536  DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK--EHLGGEIIPRSVLLCAF--- 590
             +        Y +  AV    D  + I  + +++  T+       +I+ ++V+   F   
Sbjct: 591  ALPQPQTGVRYVEWLAVSAVND-GLSIVYIVNISKTTEMWSVSSRQILDKTVISMMFLFV 649

Query: 591  EGISYLL-CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 649
             GI  +L     +G L    L+   G L +     LG  P+T      KN   +      
Sbjct: 650  PGIGNILHIGHNEGLLTRTNLDDSNGSLDNATLKFLGNAPVTFSRCEVKNQNSILINCAS 709

Query: 650  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS--LAIAKEGELTIGTIDDIQKLHIR 707
            P       K L    ++       C + +  F D   + +     +   T D    +  +
Sbjct: 710  PWY----TKGLSLVQLSSSPFVSCCQYKAPFFIDDSFIGLTTNNMVLFYTPDKNILIDTQ 765

Query: 708  SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEY 767
            ++ L   PR+I H   ++   +C L +     + +    +L++    E IS+ PL   + 
Sbjct: 766  TLDLDMTPRQIVHIPNTK--FVCVLMSDLIKGKWKSQ-AKLVNYD--ELISSEPLQLDDN 820

Query: 768  GCSILSCSFSDDSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVY 826
                 +C   + + V  CV       P+  +   G++L+  +  G  +++   +      
Sbjct: 821  LLVSAACYLENYNLVAVCVAKNLSFFPKRCD--GGQVLLLDIGSGIPKVVQSTDFDDIPQ 878

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 886
            ++  F   ++  + + + +    L+   T+ L+  C         Y++  G  I+ GD M
Sbjct: 879  AIAPFGEYVILGVQETLMV----LKVGRTKLLKKCCSKAFPHCINYLKAFGTRIIAGDAM 934

Query: 887  KSISLLIYKHEEGAIEERARDY-NANWMSAVEILDDDIYLGAENNFNLFTVRK-----NS 940
            +S   + +  EE  +   A D    + +SA+ +    +  G  + F  F + +     N 
Sbjct: 935  ESFHFVKFDKEEDILSIFADDMVPRHPLSAIGLDRSTVCCG--DKFGSFCILRLPPDIND 992

Query: 941  EGATDEE--------------RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 986
            +   D                + ++E+   YH+G  +         + L   D     ++
Sbjct: 993  DAEIDPSDVGHAFENEKFPGAKNKVELSNMYHIGSPITG-------LCLSQGDFENT-SI 1044

Query: 987  IFGTVNGVIGVIASLPHEQYLFLEKL-QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            ++GTV+G IG+   L  +    L +L +  ++K+IK   G   EQ+RS+    K V+   
Sbjct: 1045 VYGTVDGEIGLFIPLKTDTDARLFRLLEDEMKKLIKSPVGRFIEQFRSYYTPLKCVN--- 1101

Query: 1046 FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
              D +L+ S++DL      EI++ + V   +L +
Sbjct: 1102 --DSNLLLSYIDLPTNLQKEIAEKLKVKPFDLSR 1133


>gi|193702313|ref|XP_001945086.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Acyrthosiphon pisum]
          Length = 1335

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 43/334 (12%)

Query: 783  YYCVGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAF 831
            Y  +GT Y    E+  ++GRI +F + D            K+++I  KE KG V ++   
Sbjct: 1010 YIAMGTNYSY-SEDITSRGRIFLFDIIDVVPEPGKPLTKNKIKMIYAKEQKGPVTAITHV 1068

Query: 832  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
             G L+ A+ QKI  Y W L+D+   G   + +E   H  +L++        I+V DL KS
Sbjct: 1069 VGFLVTAVGQKI--YIWQLKDNDLIGIAFIDTEVYVH-QMLSI-----KSLILVADLFKS 1120

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATD 945
            I+LL ++ E   +    RD     +  +  L D+    +L ++ + NL            
Sbjct: 1121 ITLLRFQEEYRTLSLVCRDSKPLEVFDINFLIDNTELGFLASDRDQNLLLYLYQPMARES 1180

Query: 946  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG----------QIPTVIFGTVNGVI 995
                 L   G++++G  VN F      +R   S V           +    ++ T++G I
Sbjct: 1181 YGGQHLVRRGDFNIGSNVNSF----FRLRCKQSTVAPDRREAIGSDKRHVTMYTTLDGSI 1236

Query: 996  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIE 1053
            G I  +  + Y  L  LQ  L K I  + GLN + +RSF     ++   A+  +DG+L+ 
Sbjct: 1237 GYIVPIHEKNYRRLLTLQNMLVKNITHLAGLNPKAYRSFKATAPERMNQARRVIDGELVW 1296

Query: 1054 SFLDLSRTRM-DEISKTMNVSVEELCKRVEELTR 1086
             F+     R  +EI+  + V   EL + + EL R
Sbjct: 1297 MFVTCMNARQRNEIANKVGVKTIELLQDIYELDR 1330



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 126/607 (20%), Positives = 247/607 (40%), Gaps = 126/607 (20%)

Query: 13  PTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG--LQP-------MLDVPIYGRIA 63
           PT V H+    F +  E  L++A    + ++ L P     QP       +    ++G I 
Sbjct: 11  PTCVEHAVYCYFFNRVEKCLVVAGVNILRVYRLVPTDTTCQPPKTKFECLAQYTLFGNIM 70

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ---- 119
            L+       + D L ++    KF ++++D +   L T ++    D   +   NG     
Sbjct: 71  CLQSVTLCPSSPDALLLSFSEAKFSLVEYDRDMHSLRTLSLHYFEDDKFK---NGHTQHW 127

Query: 120 ---IGIIDPDCRLIGLHLYDGLFKVIPF-----DN--KGQLKEAFNIRLEEL-----QVL 164
              +  +DPD R +   +Y   F V+PF     DN    Q+  ++ I + ++      ++
Sbjct: 128 SPPLIRVDPDGRCVVGLVYGSYFVVLPFGRTIDDNAKSAQVMPSYTIPISKIDPKMNNIM 187

Query: 165 DIKFLYGCAKPTIVVLYQDNKDARHVKTY--------------EVALKDKDFVEGP-WSQ 209
           D  FL+G  +PT+++LY+       VKT+               ++L  +  V    WS 
Sbjct: 188 DFDFLHGYYEPTLLILYEP------VKTFAGRIAVRKDTCAMVAISLNIQQHVHPVIWSL 241

Query: 210 NNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPI--RPSI 254
           ++L      +I V  P+ GVLI+   +++Y +             A      P+  +  I
Sbjct: 242 DSLPYDCQKVIAVSRPIGGVLIMAVNSLIYLNQSVPPFGVALNSIAKTLTNFPLGQQEDI 301

Query: 255 TKAYGRVDA---DGSRYLLGDHAGLLHLLVITHEKEK-VTGLKIELLGETSIASTISYLD 310
                R  A      + +     G L+++ +  +  + V     E    + + + I+   
Sbjct: 302 NLVLDRATATFISSDKLVTSLCNGDLYVITLYADSMRAVRSFHFEKCASSVLTTCITVCL 361

Query: 311 NAVVYIGSSYGDSQLIKL-------NLQPDAK-----------------GSYV------- 339
           ++ +++GS  G+S L++        + +P  K                 GS V       
Sbjct: 362 DSYLFLGSRLGNSLLLRYYARSQSNDDEPSIKRKKTDETDEDLVELEVYGSEVQTSICLE 421

Query: 340 ----EVLERYVNLGPIVDFCVVDL--------ERQGQGQVVTCSGAYKDGSLRIVRNGIG 387
               EV +  +N+GP     + +           +   +++  SG  K+G+L ++   I 
Sbjct: 422 SYSFEVCDSIINIGPCSQASIGEPAYISDEFSSDEHDVELLCTSGHGKNGALSVLHRSIK 481

Query: 388 INEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                +  L G K MW++    D  F TF++++ +  T IL      E+ E +  G+ ++
Sbjct: 482 PQLVTTFHLDGYKDMWTVHGEND--FHTFMILTNVDSTLILQTG--QEINELDSSGYATR 537

Query: 448 TQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN---EWKSPPGYSVNVATANASQVLLA 504
             T+F  + +   ++QV   SVRL++  S +L++   ++ SP    ++ ++ N   VLL 
Sbjct: 538 EHTVFVCN-MNKFVIQVLRYSVRLLNG-SEQLQSVSLDFGSP---IIHGSSCNPYAVLLT 592

Query: 505 TGGGHLV 511
             G  +V
Sbjct: 593 EDGQVIV 599


>gi|428182571|gb|EKX51431.1| hypothetical protein GUITHDRAFT_134365 [Guillardia theta CCMP2712]
          Length = 1295

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 205/493 (41%), Gaps = 80/493 (16%)

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQ---VVTCSGAYKDG 377
           GDS ++ + L  +     +E LER   LG   DF V+  +    G    V+ CSG  K  
Sbjct: 439 GDSAVMMMRL--NGNEIEIETLERLTMLGVTTDFTVLSDKNVNGGDEFDVLVCSGTGKHA 496

Query: 378 SLRIVRNGIGINEQASVE---LQGIKGMWSLRSSTDDPFD-TFLVVSFISETRILAMNLE 433
           S+R +R G+ +      E     GI G++++  + +   D +FL ++F +  R+L +   
Sbjct: 497 SIRRLRYGLPVETHVRSEKGLCDGIVGLYTI--TFEQKHDQSFLFMAFTTGCRVLTVG-- 552

Query: 434 DELEE-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS------------TSRELR 480
            EL + T+  G      TL         L+QV+   V ++               S+  R
Sbjct: 553 SELSDVTDDLGLNPTALTLHAAANSDGHLIQVSDEEVIVIQQPVLDSMDLDVIPCSQPER 612

Query: 481 NEWKSPPGYSVNVATANASQVLLATGGGHLVYL-----EIGDG----ILTEVKHAQLEYE 531
             W+      ++V+ +  + V+  T GG  +++     + G      I  E+   +   E
Sbjct: 613 AVWRPAESTKISVSASLGNLVMCCTCGGTSIHILDTTRDQGSAGEFQIRGEITSFRSSEE 672

Query: 532 ISCLDINPIGENPSYS-QIAAVGMWTDI------SVRIFSLP------------DLNLIT 572
           +SC+ +  +G + S + +I+ +G + D        ++I+SL             DL + +
Sbjct: 673 VSCMAMTSLGAHGSETRKISIIGTYADALKARAGKIKIYSLGEEKREVELAQSIDLGIYS 732

Query: 573 KEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT----GELTDRKKVSLGTQ 628
              L G +     +L    G  +L+  L +G ++ F LN  +    G  T R+   L   
Sbjct: 733 GSDLSGSVPQSFGILPEPAGGVFLVVGLRNGKVIIFTLNALSLPLVGLGTTRR---LAES 789

Query: 629 PITLRTFSSKNTTHVFA-ASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPDSL 685
           PIT  + +S     + A   D   ++  S   L +  +  +   +SH  PF   A P  +
Sbjct: 790 PITFVSITSYAGPSLIALVEDVAFLVTPSRASLQFQRIGFQPGGISHAAPFICDACPLGM 849

Query: 686 AIAKEGELTIGTIDDIQKLHIRSIPLG---EH------------PRRIC-HQEQSRTFAI 729
           AI  +G+L + +ID  +KL +++IPL    EH            P R+  H +       
Sbjct: 850 AIVVDGQLKLVSIDRCEKLDVKTIPLALESEHTESESKLEDNFMPARVVWHPDAKLVIVG 909

Query: 730 CSLKNQSCAEESE 742
           C+   + C  E E
Sbjct: 910 CNYSRKVCGAEEE 922


>gi|395740218|ref|XP_002819588.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Pongo abelii]
          Length = 1388

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 163/362 (45%), Gaps = 34/362 (9%)

Query: 740  ESEMHFVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVL 792
            + E   ++L+   ++E I  +   L  +E+   + + S   +  V     Y   GT  + 
Sbjct: 1015 QQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQ 1074

Query: 793  PEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
             EE    +GRIL+      + E G      K +++ EKE KG V +L   NG L++AI Q
Sbjct: 1075 GEEVT-CRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQ 1133

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
            KI  + W LR     EL         +    + +  +FI+  D+MKSISLL Y+ E   +
Sbjct: 1134 KI--FLWSLR---ASELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTL 1188

Query: 902  EERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
               +RD     + +V+ + D+  LG   ++ + NL       E        RL    ++H
Sbjct: 1189 SLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFH 1248

Query: 959  LGEFVNRFR----HGSLVMRLPDSDVGQIPTVIF-GTVNGVIGVIASLPHEQYLFLEKLQ 1013
            +G  VN F      G+       S V +   + +  +V G IG++  +  + Y  L  LQ
Sbjct: 1249 VGAHVNTFWRTPCRGAAEGLSKKSVVWENKHITWLVSVRGGIGLLLPMQEKTYRRLLMLQ 1308

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
              L  ++    GLN   +R  + +++T+    +N LDG+L+  +L LS     E++K + 
Sbjct: 1309 NALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIG 1368

Query: 1072 VS 1073
             +
Sbjct: 1369 TT 1370



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 100/219 (45%), Gaps = 44/219 (20%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNK 185
                ++R L+E  L ++D++FL+G  +PT+++L++ N+
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQ 225



 Score = 40.0 bits (92), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 412 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 471

Query: 391 QASVELQGIKGMWSL-----RSSTDDP-------------------FDTFLVVSFISETR 426
             + EL G   MW++     +   D+P                      FL++S    T 
Sbjct: 472 VTTFELPGCYDMWTVIAPLRKEEEDNPKGEGTEQEPSTPEADDDGRRHGFLILSREDSTM 531

Query: 427 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 532 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 581


>gi|195485994|ref|XP_002091320.1| GE12310 [Drosophila yakuba]
 gi|194177421|gb|EDW91032.1| GE12310 [Drosophila yakuba]
          Length = 1455

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 200/435 (45%), Gaps = 62/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 747
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 748  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1086 QFEMVLISPETWEIVPDASISFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1144

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI 
Sbjct: 1145 DITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI- 1203

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1204 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1259

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1260 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1317

Query: 960  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 1318 GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQN 1376

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
             L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K +  
Sbjct: 1377 VLLSYQEHLCGLNPKEYRTLKSFKKQGINPSRCVIDGDLIWSYRLMANSERNEVAKKIGT 1436

Query: 1073 SVEELCKRVEELTRL 1087
              EE+   + E+ RL
Sbjct: 1437 RTEEILADLLEIERL 1451



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/400 (21%), Positives = 158/400 (39%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP---------- 52
            H  T V  S    F +  E NL++A    ++++ + P       Q L P          
Sbjct: 8   THAATAVEFSIACRFFNNLEENLVVAGANVLKVYRIAPNVEAGQRQKLNPSEMRLAPKMR 67

Query: 53  ---MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
              +    +YG + +L+     G  +D L I+ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 DDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L +L      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   A P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I  L +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLL 405



 Score = 43.5 bits (101), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGATLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL G   +W++      +SS +D  D F+++S  + T +L      E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTG--QEIN 601

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|320169222|gb|EFW46121.1| cleavage and polyadenylation specificity factor 1 [Capsaspora
            owczarzaki ATCC 30864]
          Length = 1725

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 116/495 (23%), Positives = 206/495 (41%), Gaps = 70/495 (14%)

Query: 643  VFAASDRPT-VIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPDSLA-IAKEGELTI--- 695
            VF    RP  ++ S  +K L +++ L +  VS    FN+ A P        +G L     
Sbjct: 1227 VFVCGRRPLWLLMSPTRKALRAHLMLTDGSVSAFSAFNNNACPGGFVYFTTQGTLRFCQL 1286

Query: 696  -GTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS----------------------- 731
              T +      +R +PL      I + E  RT+ + +                       
Sbjct: 1287 APTTNHDNPWPVRRVPLRATAHYIGYHEVFRTYVLVTSHPKPYFNLPRLTNDETYTPVPY 1346

Query: 732  -LKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-----YYC 785
              K ++     +   ++L+   T+E I ++ L  FE   S+   + +    V     Y  
Sbjct: 1347 TPKPRAIPATFDTFSLQLISPVTWESIHSFDLPAFERVTSVDIAAITSQETVTGLKDYVV 1406

Query: 786  VGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGK 834
            +GT  V+  E+    GRI+VF + D            KL+ + E+E KGA+ +L+   G 
Sbjct: 1407 IGTT-VIEGEDVTCHGRIIVFEIIDVVPEVNRPQTNRKLKYLMEREQKGAITALSHVCGH 1465

Query: 835  LLAAINQKIQLYKWMLRD--DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 892
            L++ I QKI ++++   D  DG   + ++         + V    +FI+VGDL  S+ LL
Sbjct: 1466 LVSCIGQKIIIWQFASDDTMDGVAFIDTQT------FVVSVSAIKNFILVGDLNNSVFLL 1519

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERG 949
             +      +   ARD++   +++ + L D   LG    +++ NL     N          
Sbjct: 1520 RFNETTKHLGFIARDFDHMSVASTQFLVDGSSLGFLATDSHQNLVVFAYNPLNRESNNGQ 1579

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-----IFGTVNGVIGVIASLPHE 1004
            RL    ++H+G  V +     +V R     V +  +V     +  T+ G +  +A +   
Sbjct: 1580 RLLRQLDFHVGSHVQQVLR--MVPRSLPVSVDRGASVKRHIDLLATLEGSLNALAPIGET 1637

Query: 1005 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTR 1062
             +  LE LQ  L   ++   GLN   +R++   +K  T  A N +DG+L+  FL L    
Sbjct: 1638 TFRRLEWLQRQLVG-LQQRAGLNPIGYRAYRFPRKMTTTRAGNVIDGELLSRFLYLGLAE 1696

Query: 1063 MDEISKTMNVSVEEL 1077
              E+++    + E+L
Sbjct: 1697 QRELARQRRNTPEDL 1711



 Score = 47.4 bits (111), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 15/114 (13%)

Query: 146 NKGQLKEAFNIRLEELQ-----VLDIKFLYGCAKPTIVVLYQDNKDARHVKTYE------ 194
            + +L+ ++ I+L ELQ     V+DI+FL G  +PT+ +L++ N  +   +T +      
Sbjct: 291 KRQRLRPSYEIKLTELQRHIHHVIDIEFLTGYFEPTLALLFEPNAPSWTGRTVQRKDTCS 350

Query: 195 -VALK-DKDFVEGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA 244
            VAL  +      P  WS + L   +  ++ VP P+CG +I+  + I++ S ++
Sbjct: 351 MVALSINTSSHSHPVVWSVDKLPFNSMRVMAVPRPVCGTVIVTPDAILHLSQSS 404


>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
          Length = 1298

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
           N+ PI+D  VVD   +   Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 503 NIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWT 562

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           ++    D + +FLV+SF+ ETR+L++ L    + T+  GF     TL C       LVQ+
Sbjct: 563 VKMKVIDSYHSFLVLSFVEETRVLSVGLSFT-DVTDSVGFQPDVSTLACGVVDDGLLVQI 621

Query: 465 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 514
               V+L   T          +  +   W  P   S+++     + +++AT     +++ 
Sbjct: 622 HKNGVKLCLPTTVAHPEGIPLASPICTSW-FPENISISLGAVGYNLIVVATSSPCFLFIL 680

Query: 515 IGDGI------LTEVKHAQLEYEISCLDI 537
               +      + E++H +L+ E+SC+ I
Sbjct: 681 GVRSVSAYQYEIYEMQHVRLQNEVSCISI 709



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 85/189 (44%), Gaps = 7/189 (3%)

Query: 625  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
            +G  P+ L   S      + A SDRP ++ S+   L Y++++ +  +H+ P  S   P  
Sbjct: 882  IGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMG 941

Query: 685  LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 744
            +    E  L +  +   ++L+++   LG  PR++ +  +SR   +        ++++   
Sbjct: 942  ILFVAENSLHLVEMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLV---MRTELSQDTYSS 998

Query: 745  FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYVLPEENEPTK 800
             +  +D  +   +S++ L+  E G S+      ++           G A +   E E TK
Sbjct: 999  DICCVDPLSGSVLSSFKLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTK 1058

Query: 801  GRILVFIVE 809
            GR++V  +E
Sbjct: 1059 GRLIVLCLE 1067


>gi|194883064|ref|XP_001975624.1| GG22421 [Drosophila erecta]
 gi|190658811|gb|EDV56024.1| GG22421 [Drosophila erecta]
          Length = 1455

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 200/435 (45%), Gaps = 62/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 747
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 748  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 795
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1086 QFEMVLISPETWEIVPDASISFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1144

Query: 796  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 844
            +  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI 
Sbjct: 1145 DITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI- 1203

Query: 845  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1204 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1259

Query: 905  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1260 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1317

Query: 960  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 1318 GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQN 1376

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
             L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K +  
Sbjct: 1377 VLVSYQEHLCGLNPKEYRTLKSFKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIGT 1436

Query: 1073 SVEELCKRVEELTRL 1087
              EE+   + E+ RL
Sbjct: 1437 RTEEILGDLLEIERL 1451



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/400 (21%), Positives = 158/400 (39%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP---------- 52
            H  T V  S    F +  E NL++A    ++++ + P       Q L P          
Sbjct: 8   THAATAVEFSIACRFFNNLEENLVVAGANVLKVYRIAPNVEAGQRQKLNPSEMRLAPKMR 67

Query: 53  ---MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
              +    +YG + +L+     G  +D L I+ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 DDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L +L      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   A P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I  L +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLL 405



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 383
           EV +  +N+ P+   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPVNYMCAGERVEFEEDGATLRPHAESLQDVKIELVAATGHSKNGALSVFV 544

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N I      S EL G   +W++      +SS +D  D F+++S  + T +L      E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTG--QEIN 601

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|268580265|ref|XP_002645115.1| Hypothetical protein CBG16808 [Caenorhabditis briggsae]
 gi|296439546|sp|A8XPU7.1|CPSF1_CAEBR RecName: Full=Probable cleavage and polyadenylation specificity
            factor subunit 1; AltName: Full=Cleavage and
            polyadenylation specificity factor 160 kDa subunit;
            Short=CPSF 160 kDa subunit
          Length = 1454

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 146/315 (46%), Gaps = 35/315 (11%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE  +PT  R         K++++ +KE KG V  L A NG LL+ + QK+  + W  
Sbjct: 1153 VVPEPGQPTSNR---------KIKVLYDKEQKGPVTGLCAINGLLLSGMGQKV--FIWQF 1201

Query: 851  RDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            +D+    + S    H ++  L+ ++T     +  D  +S+SL+ ++ E  A+   +RD  
Sbjct: 1202 KDNDLMGI-SFLDMHYYVYQLHSIRT---IALALDARESMSLIRFQEENKAMSIASRDDR 1257

Query: 910  --ANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 962
              A    A E L D +++G        N  LF+    +  +   E  RL V    ++G  
Sbjct: 1258 KCAQAPMASEFLVDGMHIGFLLSDEHGNITLFSYSPEAPESNGGE--RLTVKAAINIGTN 1315

Query: 963  VNRFRHGSLVMRLPDS-------DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            +N F        L DS       ++ Q    IFG+++G  G I  L  + Y  L  LQT 
Sbjct: 1316 INAFLRVKGHTSLLDSSSPEERENIEQRMNTIFGSLDGSFGYIRPLTEKSYRRLHFLQTF 1375

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
            +  V   + GL+ +  RS    +  V   +A+N +DGD++E +L LS     ++++ + V
Sbjct: 1376 IGSVTPQIAGLHIKGARSSKPSQPIVNGRNARNLIDGDVVEQYLHLSVYDKTDLARRLGV 1435

Query: 1073 SVEELCKRVEELTRL 1087
                +   + +L R+
Sbjct: 1436 GRYHILDDLMQLRRM 1450



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 158/399 (39%), Gaps = 93/399 (23%)

Query: 117 NGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFLYG 171
           N  I   DP  R     +Y     ++PF    +   ++ I L+++      V D+ FL G
Sbjct: 138 NPPIVRTDPANRCAASLVYGKHIAILPFHENSKRILSYIIPLKQIDPRLDNVADMVFLEG 197

Query: 172 CAKPTIVVLYQD----------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIP 221
             +PTI+ LY+             D   +    V + D+ F    W   NL    + L+ 
Sbjct: 198 YYEPTILFLYEPLQTTPGRACVRYDTMCIMGVSVNIVDRQFAV-VWQTANLPMDCNSLLS 256

Query: 222 VPPPLCGVLIIGEETIVYCSA-------------NAFKAIPIRPSITKAYGRVDADGSRY 268
           +P PL G ++ G  TIVY +              + F   P++  +      +D   S Y
Sbjct: 257 IPKPLGGAVVFGSNTIVYLNQAVPPCGIVLNSCYDGFTKFPLK-DMKHLKMTLDCSTSVY 315

Query: 269 L------LGDHAGLLHL--LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
           +      +G   G L+L  LV +     V  L+   + +TSIA T++      +++GS  
Sbjct: 316 MEDGRIAVGSREGDLYLLRLVTSSGGATVKSLEFSKVCDTSIAFTLTVCAPGHLFVGSRL 375

Query: 321 GDSQLIKLNL----QPDAK----------------------GSYVEV------------- 341
           GDSQL++  L    +  AK                      G  +E+             
Sbjct: 376 GDSQLLEYTLLKVTKESAKKQRLEQQNPSEIELDEDDIELYGGAIEMQQNDDDEQISESL 435

Query: 342 ----LERYVNLGPIVDFC----------VVDLERQGQ-GQVVTCSGAYKDGSLRIVRNGI 386
               L+R +N+GP+   C          ++D +R+     +VT SG  K+G+L + +  +
Sbjct: 436 QFRELDRLLNVGPVKSMCFGRPNYMSNDLIDAKRKDPVFDLVTASGHGKNGALCVHQRSM 495

Query: 387 GINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
                 S  L+G + +W++    ++    +L+VS +  T
Sbjct: 496 RPEIITSSLLEGAEQLWAVGRKENESH-KYLIVSRVRST 533


>gi|225455571|ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 164/369 (44%), Gaps = 37/369 (10%)

Query: 746  VRLLDDQT----FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENE 797
            VR+L+ +     ++  +T P+ + E   ++    L  + + ++     +GTAYV   E+ 
Sbjct: 1076 VRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYV-QGEDV 1134

Query: 798  PTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
              +GR+L+F V    D    L++E   KE KGA+ ++ +  G LL A   KI L+KW   
Sbjct: 1135 AARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIILHKWT-- 1192

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
              GT            +  + +    +FI++GD+ +SI  L +K +   +   A+D+ + 
Sbjct: 1193 --GTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNLLAKDFGSL 1250

Query: 912  WMSAVEILDDDIYLGA-----ENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNR 965
               A E L D   L       + N  +F    K SE    +   +L    E+H+G  V +
Sbjct: 1251 DCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQ---KLLSRAEFHVGAHVTK 1307

Query: 966  FRHGSLVMRLPD-------SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            F    ++    D       SD      ++FGT++G IG IA L    +  L+ LQ  L  
Sbjct: 1308 FLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVD 1367

Query: 1019 VIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
             +  V GLN   +R F  N +       N +D +L+  +  L      EI++ +  +  +
Sbjct: 1368 AVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQ 1427

Query: 1077 LCKRVEELT 1085
            +   + +L+
Sbjct: 1428 ILSNLNDLS 1436



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 109/503 (21%), Positives = 194/503 (38%), Gaps = 132/503 (26%)

Query: 58  IYGRIATLELFRPHG----EAQDFLFIATERYKFCVLQWDAESSELITRAM----GDVSD 109
           ++G + T+ +    G      +D + +A +  K  VL++D     L T +M    G    
Sbjct: 109 LHGNVETMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWF 168

Query: 110 RIGRPTDN---GQIGIIDPDCRLIGLHLYDGLFKVIPFDNKG------------------ 148
            + R  ++   G +  +DP  R  G+ +Y     ++     G                  
Sbjct: 169 HLKRGHESFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSA 228

Query: 149 QLKEAFNIRLEEL---QVLDIKFLYGCAKPTIVVLYQ------DNKDARHVKTYEVALK- 198
           +++ ++ I L +L    V D  F++G  +P +V+L++           +H      AL  
Sbjct: 229 RVESSYVISLRDLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSI 288

Query: 199 DKDFVEGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITK 256
                + P  WS  NL + A  L+PVP P+ GV++I   +I Y S +A  A+ +      
Sbjct: 289 STTLKQHPLIWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVS 348

Query: 257 AYG-----------RVDADGSRYLLGDHA------GLLHLLVITHEKEKVTGLKIELLGE 299
           A              +DA  + +L  D A      G L LL + ++   V  L +     
Sbjct: 349 ADNSQEMPRSSFSVELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRA 408

Query: 300 TSIASTISYLDNAVVYIGSSYGDSQLIKLNL----------------QPDAK-------- 335
           + + S I+ + N++ ++GS  GDS L++                    P AK        
Sbjct: 409 SVLTSGIAAIGNSLFFLGSRLGDSLLVQFTSILSSSVKEEVGDIEGDVPSAKRLRKSSSD 468

Query: 336 --------------GSY------------VEVLERYVNLGPIVDFC----------VVDL 359
                         GS               V + ++N+GP+ DF              +
Sbjct: 469 ALQDMVNGEELSLYGSAPNSTETSQKTFSFSVRDSFINVGPLKDFAYGLRINADPKATGI 528

Query: 360 ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------------- 405
            +Q   ++V CSG  K+G+L I++  I       VEL G KG+W++              
Sbjct: 529 AKQSNYELVCCSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNADSTK 588

Query: 406 RSSTDDPFDTFLVVSFISETRIL 428
            ++ DD +  +L++S  S T +L
Sbjct: 589 MATKDDEYHAYLIISLESRTMVL 611


>gi|296084122|emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 164/369 (44%), Gaps = 37/369 (10%)

Query: 746  VRLLDDQT----FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENE 797
            VR+L+ +     ++  +T P+ + E   ++    L  + + ++     +GTAYV   E+ 
Sbjct: 1082 VRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYV-QGEDV 1140

Query: 798  PTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
              +GR+L+F V    D    L++E   KE KGA+ ++ +  G LL A   KI L+KW   
Sbjct: 1141 AARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIILHKWT-- 1198

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
              GT            +  + +    +FI++GD+ +SI  L +K +   +   A+D+ + 
Sbjct: 1199 --GTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNLLAKDFGSL 1256

Query: 912  WMSAVEILDDDIYLGA-----ENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNR 965
               A E L D   L       + N  +F    K SE    +   +L    E+H+G  V +
Sbjct: 1257 DCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQ---KLLSRAEFHVGAHVTK 1313

Query: 966  FRHGSLVMRLPD-------SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
            F    ++    D       SD      ++FGT++G IG IA L    +  L+ LQ  L  
Sbjct: 1314 FLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVD 1373

Query: 1019 VIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
             +  V GLN   +R F  N +       N +D +L+  +  L      EI++ +  +  +
Sbjct: 1374 AVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQ 1433

Query: 1077 LCKRVEELT 1085
            +   + +L+
Sbjct: 1434 ILSNLNDLS 1442



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 109/509 (21%), Positives = 193/509 (37%), Gaps = 138/509 (27%)

Query: 58  IYGRIATLELFRPHG----EAQDFLFIATERYKFCVLQWDAESSELITRAM----GDVSD 109
           ++G + T+ +    G      +D + +A +  K  VL++D     L T +M    G    
Sbjct: 109 LHGNVETMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWF 168

Query: 110 RIGRPTDN---GQIGIIDPDCRLIGLHLYDGLFKVIPFDNKG------------------ 148
            + R  ++   G +  +DP  R  G+ +Y     ++     G                  
Sbjct: 169 HLKRGHESFARGPLVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSA 228

Query: 149 QLKEAFNIRLEEL---QVLDIKFLYGCAKPTIVVLYQ------DNKDARHVKTYEVALK- 198
           +++ ++ I L +L    V D  F++G  +P +V+L++           +H      AL  
Sbjct: 229 RVESSYVISLRDLDMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSI 288

Query: 199 DKDFVEGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITK 256
                + P  WS  NL + A  L+PVP P+ GV++I   +I Y S +A  A+ +      
Sbjct: 289 STTLKQHPLIWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVS 348

Query: 257 AYG-----------RVDADGSRYLLGDHA------GLLHLLVITHEKEKVTGLKIELLGE 299
           A              +DA  + +L  D A      G L LL + ++   V  L +     
Sbjct: 349 ADNSQEMPRSSFSVELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRA 408

Query: 300 TSIASTISYLDNAVVYIGSSYGDSQLIKLNL----------------QPDAK---GSYVE 340
           + + S I+ + N++ ++GS  GDS L++                    P AK    S  +
Sbjct: 409 SVLTSGIAAIGNSLFFLGSRLGDSLLVQFTSILSSSVKEEVGDIEGDVPSAKRLRKSSSD 468

Query: 341 VLERYVN-------------------------------------LGPIVDFC-------- 355
            L+  VN                                     +GP+ DF         
Sbjct: 469 ALQDMVNGEELSLYGSAPNSTETSQVEAQVGKTFSFSVRDSFINVGPLKDFAYGLRINAD 528

Query: 356 --VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------- 405
                + +Q   ++V CSG  K+G+L I++  I       VEL G KG+W++        
Sbjct: 529 PKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGH 588

Query: 406 ------RSSTDDPFDTFLVVSFISETRIL 428
                  ++ DD +  +L++S  S T +L
Sbjct: 589 NADSTKMATKDDEYHAYLIISLESRTMVL 617


>gi|357162146|ref|XP_003579318.1| PREDICTED: probable cleavage and polyadenylation specificity factor
            subunit 1-like [Brachypodium distachyon]
          Length = 1442

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 160/350 (45%), Gaps = 27/350 (7%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 807
            +E  ST P+ +FE   ++    L  + + ++     +GTAYV   E+   +GR+L+F   
Sbjct: 1096 WETRSTIPMQSFENALTVRIVTLHNTTTKENETLMAIGTAYV-QGEDVAARGRVLLFSFT 1154

Query: 808  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
              +    L+ E   KE+KGAV ++ +  G L+ A   KI L KW    +G+ EL +   +
Sbjct: 1155 KSENSQNLVTEVYSKESKGAVSAVASLQGHLVIASGPKITLNKW----NGS-ELTAVAFY 1209

Query: 865  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
               +  + +    +F++ GD+ KS+  L +K +   +   A+D+ +    A E L D   
Sbjct: 1210 DAPLHVVSLNIVKNFVLFGDIHKSVYFLSWKEQGSQLTLLAKDFGSLDCFATEFLIDGST 1269

Query: 925  LG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 981
            L    ++++ NL       +     +  +L    E H+G  + +F     +  LP   + 
Sbjct: 1270 LSLVVSDSDKNLQIFYYAPKMVESWKGQKLLSRAELHVGAHMTKFLR---LQMLPAQGLA 1326

Query: 982  QIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--N 1035
               T    ++FGT++G IG IA +    +  L+ LQ  L   +  V GLN   +R F  N
Sbjct: 1327 SEKTNRFALLFGTLDGSIGCIAPVDELTFRRLQSLQRKLVDAVSHVCGLNPRSFRQFKSN 1386

Query: 1036 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
             +       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 1387 GKAHRPGPDNIIDFELLTYYEILSLEEQLDMAQQIGTTRAQILSNFSDIS 1436



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/419 (21%), Positives = 173/419 (41%), Gaps = 110/419 (26%)

Query: 158 LEELQVLDIKFLYGCAKPTIVVLYQDNK------DARH----VKTYEVALKDKDFVEGP- 206
           L+   V D  F++G  +P +V+L++          ++H    +  + +++  K   + P 
Sbjct: 245 LDTNHVKDFTFVHGYIEPVLVILHEREPTWAGRISSKHHTCMISAFSISMTLK---QHPM 301

Query: 207 -WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY------CS--ANAFKAIPI-RPSITK 256
            WS  N+ + A  ++ VPPP+ GVL+I   +I Y      CS   N F + P   P I K
Sbjct: 302 IWSAANIPHDAYQILSVPPPISGVLVICANSIHYHSQSTSCSLALNNFASQPDGSPEIHK 361

Query: 257 AYGRVDADGSR--------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISY 308
               V+ D ++         +     G + LL + ++   V  L +     + I+S ++ 
Sbjct: 362 VNFHVELDAAKATWLSNDIVMFSAKTGEMLLLTVVYDGRTVQKLDLMKSKASVISSGVTT 421

Query: 309 LDNAVVYIGSSYGDSQLIKL---------------------------------------- 328
           + ++  ++GS  GDS L++                                         
Sbjct: 422 IGSSFFFLGSRVGDSLLVQFSCGVPTSVIPDIADERSADIEGDLPFSKRLKRVPSDILQD 481

Query: 329 -----------NLQPDA-----KGSYVEVLERYVNLGPIVDFC----------VVDLERQ 362
                      N+ P++     K SYV V +  VN+GP+ DF                +Q
Sbjct: 482 VTSVEELSFQNNMLPNSLESAQKISYV-VRDALVNVGPLKDFSYGLRVNADPNATGNAKQ 540

Query: 363 GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------RSSTDDPFDT 415
              ++V CSG  K+G+L +++  I  +    VEL   +G+W++        ++ D+ +  
Sbjct: 541 SNYELVCCSGHGKNGALSVLQQSIRPDLITEVELPSCRGIWTVYYKSSRGHTTEDNEYHA 600

Query: 416 FLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTLFCHDAI-YNQLVQVTSGSVRLV 472
           +L++S   E+R + +   D+L E TE   +  Q  T+   +     +++QV +   R++
Sbjct: 601 YLIISL--ESRTMVLETGDDLGEVTETVDYYVQGATITAGNLFGRRRVIQVYATGARVL 657


>gi|67521912|ref|XP_659017.1| hypothetical protein AN1413.2 [Aspergillus nidulans FGSC A4]
 gi|74598221|sp|Q5BDG7.1|CFT1_EMENI RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|40745387|gb|EAA64543.1| hypothetical protein AN1413.2 [Aspergillus nidulans FGSC A4]
 gi|259486722|tpe|CBF84808.1| TPA: Protein cft1 (Cleavage factor two protein 1)
            [Source:UniProtKB/Swiss-Prot;Acc:Q5BDG7] [Aspergillus
            nidulans FGSC A4]
          Length = 1339

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 192/438 (43%), Gaps = 70/438 (15%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 746
            +R++P+G+   ++ +   S T+ +  C        E+ E+H                  +
Sbjct: 907  MRTVPIGQQIDKLTYVSASDTYVLGTCQRCEFRLPEDDELHPEWRNEEISFLPEVNQSSL 966

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 801
            +++  +T+  I +YPL+  E+   + + S     N +       VGT+     E+ P++G
Sbjct: 967  KVVSPKTWSVIDSYPLEPAEHIMVMKTMSLEVSENTHERRDMIVVGTSLAR-GEDIPSRG 1025

Query: 802  RILVF----IVEDG-------KLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKW 848
             I VF    +V D        +L+LI ++  KGAV +L+   G+  L+AA  QK  +   
Sbjct: 1026 CIYVFEVIEVVPDPEQPETNRRLKLIGKEPVKGAVTALSEIGGQGFLIAAQGQKSMVRG- 1084

Query: 849  MLRDDGT----RELQSECGHHGHILALYVQTRGD-FIVVGDLMKSISLLIYKHEEGAIEE 903
             L++DG+      +  +C      +++  + +G    + GD +K +    Y  E   +  
Sbjct: 1085 -LKEDGSLLPVAFMDMQC-----FVSVIKELKGTGMCIFGDAVKGLWFAGYSEEPYKMSL 1138

Query: 904  RARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
             A+D +   + A + L D      + A+++ NL+ ++ + E        +L    ++H G
Sbjct: 1139 FAKDLDYLEVLAADFLPDGNKLFIVVADSDCNLYVLQYDPEDPNSSNGDKLLNRSKFHTG 1198

Query: 961  EFVN-------------RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL 1007
             F +             R   GS  M +   +   +  V+  + NG IG++  +P E Y 
Sbjct: 1199 NFASTVTLLPRTLVSSERAMSGSDKMDI--DNTAPLHQVLVTSHNGSIGLVTCVPEESYR 1256

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 1067
             L  LQ+ L   ++   GLN   +R+  ++      +  LD +L+  +LD+S+ R  EI+
Sbjct: 1257 RLSALQSQLTNTLEHPCGLNPRAYRAVESDASA--GRGMLDSNLLLQYLDMSKQRKAEIA 1314

Query: 1068 KTMNVSVEELCKRVEELT 1085
              +  +  E+   +E ++
Sbjct: 1315 GRVGATEWEIRADLEAIS 1332


>gi|221055487|ref|XP_002258882.1| CPSF (cleavage and polyadenylation specific factor), subunit A
            [Plasmodium knowlesi strain H]
 gi|193808952|emb|CAQ39655.1| CPSF (cleavage and polyadenylation specific factor), subunit A,
            putative [Plasmodium knowlesi strain H]
          Length = 2478

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 122/539 (22%), Positives = 220/539 (40%), Gaps = 96/539 (17%)

Query: 617  LTDRKKVSLGTQ-PITLRTFS----------------SKNTTHVFAASDRPTVIYSS-NK 658
            LT R+K+S  T+ P+  +TF                 SK    +F   D P +IYS+  K
Sbjct: 1907 LTKRRKISTCTKSPVKFKTFLKVNSEKNLIDINMSKLSKKCNFLFVCCDNPIIIYSTLKK 1966

Query: 659  KLLYSNVNLKEV---------SHMCPF-NSAAFP-----DSLAIAKEG-ELTIGTIDDIQ 702
            K+  S ++++ V         +++ PF N  +F      +S  I  +G +L I  +++++
Sbjct: 1967 KISTSKLSIRNVLLVDMFSDFNYLNPFHNFLSFKKKNQNNSYFIFFDGHKLCISYLNEMK 2026

Query: 703  KLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYP 761
            K  +  IP      +I  H +       C ++ +    +     V   D     F  TY 
Sbjct: 2027 KTFMERIPFHRTVEKIAYHADTGLLITACPVEEKHKTNQMMKQIVCFFDPFQNSFKYTYI 2086

Query: 762  LDTFEYGCSI----LSCSFS-------DDSN-----------------VYYCVGTAYVLP 793
            + +     SI    L+ S S       D  N                    CVGTA    
Sbjct: 2087 IPSKFSVSSICIYELASSHSLVADHSVDQMNQVNHPNNKDGALNPPVHTLICVGTANNNE 2146

Query: 794  EENEPTKGRILVFIVEDGKLQ-----LIAEKETKGAVYSLNAFNGKLLAAINQKIQLY-- 846
               EP+ G I VF+ +    Q     +       G +  L  F  K++AA+N  + +   
Sbjct: 2147 RITEPSSGHIYVFVAKKKTNQFEIKHIYTYNVNCGGITHLKQFRDKIVAAVNNTVLILDI 2206

Query: 847  KWMLRDDGT------RELQSECGHHGHILALYVQTR--------GDFIVVGDLMKSISLL 892
            +  L + GT      + ++ E       +A +  +          ++IVVGD+M S++LL
Sbjct: 2207 RNFLTNLGTYIYNASKAMKVESNDAFLEVASFTPSSWIMSLDVVKNYIVVGDIMTSVTLL 2266

Query: 893  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 952
             Y  E   + E  RDY   W +A   L +D +L ++   N   ++K++    DEE  +L 
Sbjct: 2267 SYDFENAILNEVCRDYANIWCTA---LSEDHFLVSDMESNFLVLQKSNIKFNDEESFKLS 2323

Query: 953  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI-----GVIASL-PHEQY 1006
            +V +++ G  VN+    SL   + + +  + P  I      ++     G I++L P   +
Sbjct: 2324 LVSQFNHGSVVNKMLSTSLRNLVDEYESEERPNEIVQKERSILCASSEGSISTLIPFSNF 2383

Query: 1007 LFLEK---LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 1062
            +  ++   ++  +   I  +G L+H  +R +     + + K  +DG+L + F  L   R
Sbjct: 2384 IQFKRALCIEIAINDNISSLGNLSHSSYREYKITLASKNCKGVVDGELFKMFFYLPFER 2442



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 338 YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 397
           ++E+L    N+GPI+DFCVV   +  + +++TC+   + G + I+RNG+ ++  + + + 
Sbjct: 829 FIEILSVIQNMGPILDFCVVK-NKNEEKEIITCNSYGRTGCISIIRNGMKVDIISKLNIG 887

Query: 398 GIKGMWSLR 406
            I  M+ ++
Sbjct: 888 KITNMFVVK 896


>gi|430814208|emb|CCJ28535.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 134

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 4/131 (3%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           YVV+AHK ++V ++    F  P+  +L+IA   RIEI+ L+ QGL+   +  I G+++ +
Sbjct: 3   YVVSAHKASSVKYAVKSYFLEPENPSLVIA--NRIEIYTLSTQGLKHAHEFTINGKVSAI 60

Query: 66  ELFRPH-GEAQDFLFIATERYKFCVLQWDAESSELITRAM-GDVSDRIGRPTDNGQIGII 123
             ++PH G   D LFI TE   +  L WD   + L    +  DV D   R TD G + II
Sbjct: 61  LSYKPHIGSDTDHLFIVTEECVYFTLSWDRIKNRLCNEILIKDVFDPSLRTTDCGHLSII 120

Query: 124 DPDCRLIGLHL 134
           DPD R I L +
Sbjct: 121 DPDYRAIALKI 131


>gi|156097003|ref|XP_001614535.1| hypothetical protein [Plasmodium vivax Sal-1]
 gi|148803409|gb|EDL44808.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 2558

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 119/565 (21%), Positives = 226/565 (40%), Gaps = 110/565 (19%)

Query: 604  HLLNFLLNMKTGELTDRKKVSLGTQ-PITLRTF----SSKNTTHV------------FAA 646
            +L ++++  K   LT R+K+S  T  P+  + F    S +N   V            F  
Sbjct: 1962 YLKSYVVKSKKIMLTKRRKISTCTNSPVKFKAFLKVHSERNQIDVNMSKLTKRCNFLFVC 2021

Query: 647  SDRPTVIYSS-NKKLLYSNVNLKEV---------SHMCPFNSAAF------PDSLAIAKE 690
             D P +IYS+  KKL  S ++++ V         +++ PF++          +S  I  +
Sbjct: 2022 CDSPIIIYSTLKKKLSISKLSIRNVHLVDMFSDFNYLNPFHNFLLFKKKNQNNSYFIFFD 2081

Query: 691  G-ELTIGTIDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRL 748
            G +L I  +++++K  +  IP      +I  H +       C ++ +    +     V  
Sbjct: 2082 GNQLCISYLNEMKKTFMERIPFHRTVEKIAYHADTGLLITACPVEEKHKTNQMMKQIVCF 2141

Query: 749  LD--DQTFEF------------ISTYPLDTFEYGCSI--------------------LSC 774
             D    +F++            I  Y L     G S+                    L  
Sbjct: 2142 FDPFQNSFKYTYIIPSKFSVSSICIYELAPSSGGASMGEMEQTSQMGQMEQTNQTNELKP 2201

Query: 775  SFSDDSN------VYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ-----LIAEKETKG 823
            S  ++           CVGTA       EP+ G I VF+ +    Q     +     + G
Sbjct: 2202 SHPEERTDAPPVRTLICVGTANNNERITEPSSGHIYVFVAKKQTNQFEIKHVYTYNVSCG 2261

Query: 824  AVYSLNAFNGKLLAAINQKI----------QLYKWMLRDDGTRELQSECGH--------H 865
             +  L  F  K++AA+N  +           L  ++       +++S             
Sbjct: 2262 GITHLKQFRDKIVAAVNNTVVILDIGNFLANLGAYIYNSSKAIKIESNDAFLEVASFTPS 2321

Query: 866  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 925
              I++L V    ++IVVGD+M S++LL Y  E   + E  RDY   W ++V  L ++ +L
Sbjct: 2322 SWIMSLDVVE--NYIVVGDIMTSVTLLSYDFENAILNEVCRDYANIWCTSVSALSENHFL 2379

Query: 926  GAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD-----V 980
             ++   N   ++K++    DEE  +L +V +++ G  VN+    SL   + D +     +
Sbjct: 2380 VSDMESNFLVLQKSNIKFNDEESFKLSLVSQFNHGSVVNKMFSTSLRNLVDDEERRNEIL 2439

Query: 981  GQIPTVIFGTVNGVIGVIASLPHEQYLFLEK---LQTNLRKVIKGVGGLNHEQWRSFNNE 1037
             +  +++  +  G I  +  +P   +L  ++   ++  +   I  +G L+H  +R +   
Sbjct: 2440 QKEQSILCASSEGSISAL--IPFSNFLQFKRALCIEIAINDNISSLGNLSHSSYREYKVS 2497

Query: 1038 KKTVDAKNFLDGDLIESFLDLSRTR 1062
              + + K  +DG+L + F  L   R
Sbjct: 2498 LASKNCKGVVDGELFKMFFYLPFER 2522



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 1/69 (1%)

Query: 338 YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 397
           ++E+L    N+GPI+DFCVV   + G+ +++TC+   + G + I+RNG+ +N  + + L 
Sbjct: 822 FIEILAVIQNMGPILDFCVVK-NKNGEKEIITCNSYGRTGCISIIRNGMKVNIISKLSLG 880

Query: 398 GIKGMWSLR 406
            I  M+ ++
Sbjct: 881 KITNMFVVK 889


>gi|157872916|ref|XP_001684981.1| putative CPSF-domain protein [Leishmania major strain Friedlin]
 gi|68128051|emb|CAJ06910.1| putative CPSF-domain protein [Leishmania major strain Friedlin]
          Length = 1347

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 206/987 (20%), Positives = 378/987 (38%), Gaps = 169/987 (17%)

Query: 209  QNNLDNGADLLIPVPPPLCGVLIIGEETI-----VYCSANAF-KAIPIRPSITK-AYGRV 261
            Q N+D  A  ++P      G+ ++G   +     V      F + IP R +I   +   V
Sbjct: 320  QANVDPTASRIVPSRH---GLFVVGNHLVTLIQQVRPRKGVFSREIPSRQAILDVSCASV 376

Query: 262  DADGSRYLLGDHAGLLHLLVITHE----KEKVTGLKIELLGETSIASTISYLDNAVVYIG 317
             AD S  L+G   G+L  + +       ++     +       +I + +  L   +  + 
Sbjct: 377  SADASELLIGFSDGVLARVTVISRGMGGEDPELAFRFLSHPAPTIPTELVTLHADLYLLC 436

Query: 318  SSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDG 377
            S +  S  ++L+     + S  EVL    N GP++D  +   +      VV  +G ++ G
Sbjct: 437  SRFDSSFTVRLD-----EASCEEVLH---NCGPVLD--MTTHKNGSHNSVVASTGIHRGG 486

Query: 378  SLRIVRNGIGINEQASVEL----QGIKGMWSLRS-STDDPFDTFLVVSFISETRILAMNL 432
             + ++R+ + + EQA + L    Q I     L   +T    + F +VS        A+ L
Sbjct: 487  GISVLRSAVMLREQADIPLRCHPQRILCAGELMCITTPAAANRFFLVS------ARALTL 540

Query: 433  EDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 492
            E+       E            DA  NQLV +++  +  +  +   +    + P      
Sbjct: 541  EELAPHVFPEIVSRHLLVELGLDAALNQLVLISARGIAWLRLSGPRVEAVSQLP------ 594

Query: 493  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ-LEYEISCLDINPIGENPSYS-QIA 550
               A+  Q+L A     L    + DGI+  V   Q L Y +  L    I      S  + 
Sbjct: 595  -RQADDPQILFAVVRHGLTV--VCDGIVVTVYRGQDLVYTVPSLAGVAISSVSLVSPTLL 651

Query: 551  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS-------YLLCALGDG 603
             +G W D  V ++ L          L  + +PR++  CA   +S         L  +  G
Sbjct: 652  VLGQW-DGVVALYELGHRQADVVGLLLLDSVPRTIA-CAVPPLSPSSVVGEAALPMIYIG 709

Query: 604  HLLNFLLN-----MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 658
             L  FL+      ++ GE   R  V +   P+ L   + ++   +   +    V+  +  
Sbjct: 710  TLHGFLVGTTVALLRRGE--KRLSVFVAPHPLELLELAGRHAGLLCLGNVPLVVLCVAGG 767

Query: 659  KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRI 718
             L  + ++L  VS     ++     +     +G L +G+++ ++K     +PLGE   ++
Sbjct: 768  GLQLTGLHLTGVSAAATVDADLQCYAFYSKHDGRLHVGSLEALEKTSRTFLPLGETITQL 827

Query: 719  CHQEQSRTFAICSLKNQSCAEESEMHF---------------------VRLLDDQTFEFI 757
             H+  +      S++     E  E+ F                     V LL+++   F+
Sbjct: 828  -HETAAWGGYAASVRK---VEGDEVLFLPSAVIQFPWAADLALWRSAAVPLLENERCVFL 883

Query: 758  STYPLDTFEYGCSI------LSCSFSDDSNV-------YYCVGTAYVLPEENEPTKGRIL 804
             T  LD  E G +       +  + SD + V          +G+++  P+E     GRI 
Sbjct: 884  QTVRLDGGEGGGAGERGGEPIDVAASDSAGVSEEEWQHLLLIGSSFTFPDEQRARSGRIT 943

Query: 805  VFIV----EDGKLQLIAEKETKGAVYSLNA---FNGKLLAAINQKIQLYKWMLRDDGTRE 857
               +    +  +L LIA K+  GA+    A   + G++   +N  + LYKW   +D T  
Sbjct: 944  WCALREEHQQQRLHLIASKDIGGALQCCAAVPHYKGRIALGVNGCVCLYKWN-TEDQTFV 1002

Query: 858  LQSECG---HHGHILALYVQTRGDFIVVG-DLMKSISLLIYKHEEGAIEERARDYNANWM 913
             +  C        ++ LY  +    ++V  D+  S   +     +G+++   RD      
Sbjct: 1003 AEERCRVGLTVTKLIPLYHTSLAASVLVALDVRHSAFFIEVDTLQGSLKVLCRDAELRG- 1061

Query: 914  SAVEILDDDIYLGAEN--------NFNLFTV---------RKNSEGATDEERGRLEVVGE 956
                ++D  I   AEN        NF    V            +  A+   + R EV  +
Sbjct: 1062 ----VMDGHIGSDAENLCLFDDSLNFTALRVVPLPVEAGDGDAAAAASVTAQYRFEVRAQ 1117

Query: 957  YHLGEFVNRFRHGSL----VMRLPDSDVGQI----------PTVIFGTVNGVIGVIASLP 1002
             HLG+ V   R GS     +M  P S               P ++F T +G  GV+  + 
Sbjct: 1118 CHLGDLVTCVRQGSFAATSLMEAPASCASAQNRLLLPGIAGPQLVFATAHGGFGVVTPVH 1177

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--------------------SFNNEK-KTV 1041
               YL L  L+ +L + ++ +GGL+H+ +R                    +   E+ +  
Sbjct: 1178 AATYLVLRTLEASLVRTLQPLGGLSHQAFREVLRSGQERGVSYLASKTGCALTRERLRRY 1237

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEISK 1068
            +  N +DGD++E F+ LS +   ++ +
Sbjct: 1238 EPLNTVDGDMVEQFVQLSVSDKKQVCR 1264


>gi|313232279|emb|CBY09388.1| unnamed protein product [Oikopleura dioica]
          Length = 1451

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 171/373 (45%), Gaps = 40/373 (10%)

Query: 745  FVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENE 797
            FV +    ++E I  S   +D  E+     S     ++++     Y  +GT+ +  E+ +
Sbjct: 1083 FVEMFSPASWEVIPNSRIEMDAHEHILCCRSVYLKSEASMSGRKQYIAIGTSNICGEDFQ 1142

Query: 798  PTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 846
             ++GR+++  V D            K + + +   +G V ++++ +G L+AAI QK+ ++
Sbjct: 1143 -SRGRLILLEVIDVVPEPGKPLTRYKYKTVFDASQRGPVSAVDSLDGALIAAIGQKVFIH 1201

Query: 847  KWM---LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
             +    LR  G  + Q    H  H    Y        +VGD+ + I+LL ++ E   I +
Sbjct: 1202 AFQDDNLRATGFVDTQLYT-HATHCFKNYA-------LVGDIQQGITLLRHQGERNCISQ 1253

Query: 904  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVR---KNSEGATDEERGRLEVVG 955
             +R   A  ++AV IL D   +G      + N  ++  +   K S G     R     +G
Sbjct: 1254 ISRARRAGEVTAVGILLDGNQVGLVSTDMQRNLQVYMYKPDQKESNGGKQLVRQADINLG 1313

Query: 956  EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
            +  +  + +  R      ++  ++        +  ++G IG I  +  + +  LE LQT 
Sbjct: 1314 KRVISIWNSLGRQNDTFTKVALTENDARHVTFYAGLDGSIGDIVPVSEKVFRRLEMLQTL 1373

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            ++  +   GGLN  ++R   NE + ++  AKN +DGDL+E F  LS T   ++S+ + V+
Sbjct: 1374 VQSHLPHYGGLNPREYRYCTNEYRDLENAAKNIIDGDLLERFNGLSFTEQTDLSRKIGVT 1433

Query: 1074 VEELCKRVEELTR 1086
             E L   + ++ R
Sbjct: 1434 REALLDDMMDVQR 1446



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/401 (20%), Positives = 168/401 (41%), Gaps = 71/401 (17%)

Query: 5   NYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---------GLQPMLD 55
           +Y   + +PT V  SC  NF    E NL +A    + ++ +              +   +
Sbjct: 19  SYHKESQRPTGVDESCALNFYDDGEQNLAVAAGNMLSVYRIRSSVDEAGNHFDRFELCDE 78

Query: 56  VPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD----RI 111
             ++G +  +   R  G  +D L ++ E  K  +++++ ++  L T +M    D    R 
Sbjct: 79  FELWGIVVCMTRLRLAGSVRDSLLLSIEESKCVIVEYEPDTGSLSTISMHFFQDEDLRRG 138

Query: 112 GRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF------DNKGQLKEA-------FNIRL 158
            R   +  +  +D   R   + +Y     V+PF      D  GQ  +A       F   +
Sbjct: 139 FRKLSSMALARVDGFNRCAAVLVYGSYLAVLPFRRSTERDLSGQRHQAVFYENSGFIANM 198

Query: 159 EELQ--------VLDIKFLYGCAKPTIVVLYQ----------DNKDARHVKTYEVALKDK 200
            +LQ        VLD +FL G   PTI++LY+          + +D   +    + L D+
Sbjct: 199 IDLQSLPVKIASVLDFQFLEGYNDPTILLLYEALPTWTGRVTERQDTCGMVALSINLIDE 258

Query: 201 DFVEGP--WSQNNL---DNGADLLIPVPPPLCGVLIIGEETIVYCSAN------AFKAIP 249
                P  W    L   +  +  L P+P PL G L+    +++Y   +      A  ++P
Sbjct: 259 TH---PVIWQMAGLPFPNPYSSALFPIPKPLGGSLLFATNSLIYLDQSVPPYGVALNSLP 315

Query: 250 IRPS----ITKAYGRVDADGSRY-LLGDHAGLLHL-----LVITHEKEKVTGLK---IEL 296
           +  +     T+    ++    +  +L D +  + L      +IT +K+ +  ++   ++ 
Sbjct: 316 LGCTNFALKTQDVAPLNLQNCKACMLSDDSICVSLESGDVYIITLKKDSLNNVRRFYLDQ 375

Query: 297 LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGS 337
           +  + I +T+S L + ++++GS  G+S L++   + ++K S
Sbjct: 376 VASSVIPTTLSKLSDNLIFLGSRLGNSLLLRYKCKENSKKS 416


>gi|294889072|ref|XP_002772683.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
 gi|239877121|gb|EER04499.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
          Length = 229

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLR---------SSTDDPFDT 415
           Q+   SG     +LRI+R+G+ + E  + EL G    +++++         +  +   D 
Sbjct: 34  QIYALSGRGPRSALRILRHGLTLGEAGASELPGQPNALFTIKPFGASYAPVAEGEVESDR 93

Query: 416 FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 475
           ++VVSF+ +T  L +   D + E    GF  +  TLF         +QV    +R V++ 
Sbjct: 94  YIVVSFVDQTLTLLVT-SDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTGIRHVAAG 152

Query: 476 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG---DGILTEVKHAQLEYEI 532
            R    EW++PPG  V +A +N SQV++A  GG +   E+    +G L+EV    +  E+
Sbjct: 153 RRT--TEWRAPPGRQVTMAASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKRDIGCEV 210

Query: 533 SCLDINPIGENPSYSQIAA 551
           + L + P+    + SQ  A
Sbjct: 211 AALTVQPLSSGRTRSQFMA 229


>gi|291232722|ref|XP_002736302.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
            [Saccoglossus kowalevskii]
          Length = 984

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 208/500 (41%), Gaps = 97/500 (19%)

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAIAKEGELTIGTID 699
            VF     P  ++ +++  L S+    + S  C  PF++   P   L   K GEL I  + 
Sbjct: 523  VFVCGPYPHWLFMTSRGALRSHPMHIDGSVTCFAPFHNINCPKGFLYFNKHGELRICVLP 582

Query: 700  DIQKLH----IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE--------------ES 741
                      +R +PL   P  I +  +S+T+A+ +  ++ C                E 
Sbjct: 583  THLSYDALWPVRKVPLRCTPHFISYHIESKTYAVVTSVSEPCLRICKMTGDDKEFEDVER 642

Query: 742  EMHFV---------RLLDDQTFEFISTYPLDT--FEYGCSILSCSFSDDSNV-----YYC 785
            +  F+         +L    ++E I    +DT  +E+   + +     +  V     +  
Sbjct: 643  DDRFIFPTIEKFSLQLFSPLSWEAIPNTKIDTEDWEHITGLKTVFLKSEGTVSGLKGFIA 702

Query: 786  VGTAYVLPEENEPTKGRILVFIV-----EDG------KLQLIAEKETKGAVYSLNAFNGK 834
            V T  V  EE    +GRIL+F V     E G      KL+L+ +KE KG V +L    G 
Sbjct: 703  VSTTIVYGEEVT-CRGRILIFDVIEVVPEPGQPLTKNKLKLLYDKEQKGPVTTLCDIEGL 761

Query: 835  LLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            L AAI QKI L  W  R++   G   + ++   H H L     T  +FI+  D+ KS+SL
Sbjct: 762  LAAAIGQKIFL--WAFRNNDLIGVAFIDTQI--HIHTLC----TIKNFILAADIRKSVSL 813

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGATDE-ERG 949
            L +  E+ ++    R+          +L    +    +  + F +R K S+ AT++   G
Sbjct: 814  LRFSDEDRSLSLVTRES----FGGQRLLRRADFNAGSHVCSFFRMRSKLSDPATEKLLTG 869

Query: 950  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 1009
             +E              RH                  +F T++G IG +  +  + Y  L
Sbjct: 870  PMER-------------RH----------------VTMFATLDGSIGYLIPMTEKTYRRL 900

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEIS 1067
              LQ  L        GLN + +R   ++ K+++   KN LDGDL+  +  LS     E++
Sbjct: 901  LMLQNALTTQTLHTAGLNPKGFRMVKHQTKSLENTHKNILDGDLLWKYTFLSVNERTELA 960

Query: 1068 KTMNVSVEELCKRVEELTRL 1087
            K +  SVE++   + ++ RL
Sbjct: 961  KKIGTSVEQILDDLMDVERL 980


>gi|119484094|ref|XP_001261950.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Neosartorya fischeri NRRL 181]
 gi|148886830|sp|A1DB13.1|CFT1_NEOFI RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|119410106|gb|EAW20053.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Neosartorya fischeri NRRL 181]
          Length = 1400

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 160/371 (43%), Gaps = 37/371 (9%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 800
            ++++  +T+  I +Y L   EY  ++ +       N +       VGTA+    E+ P++
Sbjct: 1027 LKVVSPRTWTVIDSYSLGPAEYVMAVKNMDLEVSENTHERRNMIVVGTAFAW-GEDIPSR 1085

Query: 801  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 847
            G I VF V            D KL+LI ++  KGAV +L+   G+  L+AA  QK  +  
Sbjct: 1086 GCIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRG 1145

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  +         ++GD +K +    Y  E   +    +D
Sbjct: 1146 --LKEDGSLLPVAFMDMQCYVNVVKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD 1203

Query: 908  YNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
                 + A E L D      L A+++ NL  ++ + E        RL    ++H+G F  
Sbjct: 1204 QGYLEVVAAEFLPDGDKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLARSKFHMGHFAT 1263

Query: 965  RFRHGSLVM-----RLPDSDVGQIPT------VIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
                    M      + D D  +I +      V+  + +G +G++ S+P E Y  L  LQ
Sbjct: 1264 TMTLLPRTMVSSEKAMADPDSMEIDSQTISQQVLITSQSGSVGIVTSVPEESYRRLSALQ 1323

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            + L   ++   GLN   +R+   E      +  LDG+L+  +LD+ + R  EI+  +   
Sbjct: 1324 SQLTNSLEHPCGLNPRAYRAV--ESDGTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAH 1381

Query: 1074 VEELCKRVEEL 1084
              E+   +E +
Sbjct: 1382 EWEIKADLEAI 1392


>gi|118346970|ref|XP_001006962.1| CPSF A subunit region family protein [Tetrahymena thermophila]
 gi|89288729|gb|EAR86717.1| CPSF A subunit region family protein [Tetrahymena thermophila SB210]
          Length = 1112

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 193/935 (20%), Positives = 380/935 (40%), Gaps = 133/935 (14%)

Query: 228  GVLIIGEETIVYCSANAFKAIPIR---PSITKAYGRVDADGSRYLLGDHAGLLHLLVITH 284
            G+++  +  I Y S N    I      P     +  V  D + ++    A     L + +
Sbjct: 234  GLILFSDYKIFYYSYNDKSTIEFTTPFPDEVICHSHV-KDTTYFIATQDAAFQSSLYLVN 292

Query: 285  EKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN--LQPDAKGSYVEVL 342
                   + I+ LG  S  ++I  L    ++I S   D ++IK++     + +G ++EV 
Sbjct: 293  ILASSRSIDIKYLGRISPPTSIIQLPEQHIFITSVDDDCKVIKVHDKFIKNLEG-HLEVK 351

Query: 343  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKG 401
             +  NL  I +  +++ +     Q +  S   K+ S+ I + G+ + ++  ++    I+ 
Sbjct: 352  LKLSNLSSIYNMKLLESDF---NQRLIISSPRKEQSMNIFQKGMSLIQKGEIKFNSPIRE 408

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRIL-----------AMNLEDELEETEIEGFCSQTQT 450
            M  + S        F+VVSF  +T IL            MN+   L         S++Q 
Sbjct: 409  MLVVHS-------VFIVVSFDFQTLILKLDDKKGSFNVVMNINCGLLNVFALESSSESQK 461

Query: 451  LFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 510
            L C          V++ S++L+  T   + +E  +     + ++T N + ++ A    +L
Sbjct: 462  LVCL---------VSAQSIKLIDLTRANILSEI-AISNKRIILSTINKNILITADSTNNL 511

Query: 511  VYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNL 570
                  +  +++V+        S   IN      SY    AV +W    + + +  D   
Sbjct: 512  QAFNFLNNQISQVETFSYNSRYSYSAIN------SYGNYIAVALWFQSYIILINASDPTK 565

Query: 571  ITKEHLGGEIIPRSVLLCAFEGISYLLCALGDG--HLLNFLLNMKTGELT--DRKKVSLG 626
              +  +  + + RS++   F   + LL    DG   L+ +  + +   +T  ++K + +G
Sbjct: 566  THQIDIPTQKVVRSLI---FHEENKLLIGYSDGIISLVYYSTDDQNNIVTSNNQKNMVIG 622

Query: 627  TQPIT---LRTFSSKNTTHVFAASDRPTVIY---------------SSNKKLLYSNVNLK 668
             +P+    LR FSS      +  S  P  I                 S ++   +  N++
Sbjct: 623  YKPVKFRQLRLFSS------YCQSSTPACISCISNEVSILSLRKVDESYQRYQKTYFNIQ 676

Query: 669  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI--PLGEHPRRICHQE---- 722
            +V+ +        P  L +AK+  L+IG I+  QK HI S    + E     C  E    
Sbjct: 677  DVNQIDEIEINGVP-YLIMAKKNCLSIGGIEVSQKFHIYSFGKDVKEQNEFRCQTELVDV 735

Query: 723  -QSRTFAICSLKNQS---CAEESEMHFVR---LLDDQTFEFISTYPL----DTFEYGCSI 771
             ++ + +I  ++N+          +H ++   LL    F     Y L    D F  G   
Sbjct: 736  IRNMSISISIVENEQDDVVCSNILLHSIKNQDLLQQLKFNNTCIYSLLVVGDYFFIGGK- 794

Query: 772  LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET-------KGA 824
                  + +  Y      Y++  EN+  +   L F +   ++Q  +E             
Sbjct: 795  -----QEQNQTYEGFLQVYLVDNENKMIQVDKLAFKIPVMQIQKYSENSIAIILGHENFK 849

Query: 825  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 884
            +Y +   + +  + + Q  Q +K++      +E+ S+   +   L+L    R   I++ D
Sbjct: 850  IYQMPYTSAQEYSILKQNTQ-HKFL------QEIVSQSNLNITALSLDCNKRNQ-ILIAD 901

Query: 885  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 944
              + I L  ++ +   +   A+     + +  + L D+  + +++N N+   R+N     
Sbjct: 902  RTQGIQL--FQEQNKKVMLAAKSPFPVFSTHAKFLGDENIVLSDSNTNIVIFRQNDFAEN 959

Query: 945  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ-------IPTVIFGTVNGVIGV 997
            D ER +L V+   + G+ V      SL  ++   DV         +  VI+GT  G IGV
Sbjct: 960  DFERMKLLVLSAINNGDIV----ITSLRRKVNTKDVKDKYITTEGLDQVIYGTQKGWIGV 1015

Query: 998  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFL 1056
            I SL  + Y  L+ LQ ++ +  K     ++ +W+S  N  +   D  NF+DG++I   L
Sbjct: 1016 IMSLNEQAYTVLQDLQESILQKFKCPLKFDYNKWKSIRNIPQSKSDKSNFIDGEIIFKVL 1075

Query: 1057 DLSRTRMDEISKTMNV----SVEELCKRVEELTRL 1087
             +S++ + ++   M+     S+ E+ + +E L  L
Sbjct: 1076 KMSQSELVQVLDGMSAMPKPSIAEMEQLIENLDLL 1110


>gi|341892673|gb|EGT48608.1| CBN-CPSF-1 protein [Caenorhabditis brenneri]
          Length = 1440

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 142/311 (45%), Gaps = 28/311 (9%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE  +PT  R         K++++ +KE KG V  L A  G LL+ + QK+  + W  
Sbjct: 1140 VVPEPGQPTSNR---------KIKVLFDKEQKGPVTGLCAMEGLLLSGMGQKV--FIWQF 1188

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN- 909
            +D+    L S    H ++  L+  +     +  D  +S+SL+ ++ E  A+   +RD   
Sbjct: 1189 KDNDLMGL-SFLDMHYYVYQLH--SLRSIALACDARESMSLIRFQEENKAMSVASRDDRK 1245

Query: 910  -ANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 965
             A    A + + D  ++G   ++ N N+       E        RL V    ++G  +N 
Sbjct: 1246 CAQAPMAAQFMVDGAHIGFLLSDENGNITLFNYAPEAPESNGGERLTVRAAINIGTNINA 1305

Query: 966  F----RHGSLV--MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            F     H +L+           Q  + IF +++G  G I  L  + Y  L  LQT +  V
Sbjct: 1306 FLRVKGHTALLNLHEFEKEAAEQRMSTIFASLDGSFGFIRPLTEKSYRRLHFLQTFIGSV 1365

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVD---AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
             + + GL+ +  RS    +  V+   A+N +DGD++E +L+LS     ++++ + V    
Sbjct: 1366 SQQIAGLHIKGARSAKPPQPIVNGRNARNLIDGDVVEQYLNLSTYDKTDLARRLGVGKYH 1425

Query: 1077 LCKRVEELTRL 1087
            +   + EL R+
Sbjct: 1426 IIDDLMELRRM 1436



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 210/532 (39%), Gaps = 112/532 (21%)

Query: 124 DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTIV 178
           DP+ R     +Y     ++PF    +   ++ I L+++      V DI FL G  +PTI+
Sbjct: 144 DPENRCAASLVYGKHIAILPFHENSKRIHSYIIPLKQIDPRLDNVADIVFLDGYYEPTIL 203

Query: 179 VLYQD----------NKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCG 228
            LY+             D   +    V + D+ F    W   NL      L+P+P PL G
Sbjct: 204 FLYEPLQTTPGRACVRYDTMCIMGVSVNIVDRQFAV-VWQTANLPMDCATLLPIPKPLGG 262

Query: 229 VLIIGEETIVYCSA-------------NAFKAIPIRPSITKAYGRVDADGSRYL------ 269
            ++ G  TIVY +              + F   P++  +      +D   S Y+      
Sbjct: 263 AIVFGSNTIVYLNQAVPPCGIVLNSCYDGFTKFPLK-DMKSMKMTLDCSTSVYMEDGRIA 321

Query: 270 LGDHAGLLHL--LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           +G   G L L  LV +     V  L+   + +TSIA T++      +++GS  GDSQL++
Sbjct: 322 VGTRDGELFLLRLVTSSGGATVKSLEFSKVWDTSIAYTLTVCAPGHLFLGSRLGDSQLLE 381

Query: 328 LNL-----------QPDAKGSYVEV---------------------------------LE 343
            +L           + + + ++VE                                  L+
Sbjct: 382 YSLIKTTRESVKRHKMEQEQNHVEAELDEDDLELYGGAIEEQQNDDEEQITESLQFSELD 441

Query: 344 RYVNLGPIVDFCV----------VDLERQGQ-GQVVTCSGAYKDGSLRIVRNGIGINEQA 392
           R  N+GP+   CV          VD +R+     V+T SG  K+GSL + +  +      
Sbjct: 442 RLRNIGPVKSMCVGRPNYMSNDLVDAKRRDPVFDVITASGHGKNGSLCVHQRSLRPEIVT 501

Query: 393 SVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF 452
           S  L+G + +W++    ++    +L+VS I  T +L +  E    E  +  F +   T+ 
Sbjct: 502 SSLLEGAEQLWAVGRKENESH-KYLIVSRIRSTLVLELGEELIELEEPL--FVTGQPTVA 558

Query: 453 CHDAIYNQL-VQVTSGSVRLVSSTSR--ELRNEWKSPPGYSVNVATANASQVLLATGGGH 509
             +       VQVTS S+ LV+   +  E++ +   P    V  +  +    +L   G  
Sbjct: 559 AGELSQGAFAVQVTSTSIALVTDGQQLAEVKIDSNFP---VVQASIVDPYVAVLTQNGRL 615

Query: 510 LVYLEIGDGI--LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 559
           L+Y  + +    L E+  AQ  +              S SQI ++ M+ D S
Sbjct: 616 LLYTLVSNPYMQLQEIDLAQTPFSTFIAQ--------SASQITSISMYADAS 659


>gi|154342093|ref|XP_001566998.1| putative CPSF-domain protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|134064323|emb|CAM40524.1| putative CPSF-domain protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1347

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 185/465 (39%), Gaps = 101/465 (21%)

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF--- 745
            ++G L IG+++ ++K     +PLGE   ++        +A+   K     E  E+ F   
Sbjct: 798  QDGRLHIGSLEALEKTSRTFLPLGETVTQLHETAAWGGYAVAVRK----VEGDEVLFLPS 853

Query: 746  ------------------VRLLDDQTFEFISTYPLDTFEYG-----C-------SILSCS 775
                              V LL+++   F+ T  LD  E G     C       +I S  
Sbjct: 854  SVIQSPWTADLGLWRTAAVPLLENERCVFLQTVRLDGSEGGGPAERCGEQIDVPAITSAG 913

Query: 776  FSD-DSNVYYCVGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYS--- 827
             S+ D      VG+++  P+E     GR++ F + +     +L+LIA K+  GA+     
Sbjct: 914  VSEEDWQHLLLVGSSFTFPDEQRARSGRVMWFALHEERQGQRLRLIASKDIGGALQCCAE 973

Query: 828  LNAFNGKLLAAINQKIQLYKWMLRDDG-------------TR--ELQSECGHHGHILALY 872
            +  + G++   +N  + LYKW   D               TR   L +       ++AL 
Sbjct: 974  VPYYKGRIALGVNGCVCLYKWNTEDQTFVAEERCRVGLTVTRLIPLYNTALAASVLVALD 1033

Query: 873  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 932
            V+    FI V  L  S+ +L     EG +      Y  +    + + DD++   A     
Sbjct: 1034 VRHSAFFIEVDLLQGSLKVLC---REGNLRGVMDGYVGSDAENLCLFDDNLNFTALKVVP 1090

Query: 933  LFT---VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLPDSDVGQI-- 983
            L         +  A+   + R EV  +YH+G+ V   R GS     +M+ P         
Sbjct: 1091 LPVEPGDGDAAAAASGTPQCRFEVRAQYHVGDLVTCVRPGSFAATSLMKAPTPSSSVPSP 1150

Query: 984  --------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--- 1032
                    P ++F T +G  GV+  L    YL L  L+ +L + +  +GGL+H+ +R   
Sbjct: 1151 LLLPGIAGPQLVFATAHGGFGVVTPLHAATYLVLRALEASLERTLPPLGGLSHQAFREVL 1210

Query: 1033 -----------------SFNNEK-KTVDAKNFLDGDLIESFLDLS 1059
                             +   E+ +  ++ N +DGD++E FL LS
Sbjct: 1211 RAGQERGVSYLASKVGCALTRERLRRYESLNTVDGDMVEQFLWLS 1255


>gi|405977622|gb|EKC42064.1| Cleavage and polyadenylation specificity factor subunit 1
            [Crassostrea gigas]
          Length = 1369

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 144/329 (43%), Gaps = 32/329 (9%)

Query: 783  YYCVGTAYVLPEENEPTKGRILV-----FIVEDG------KLQLIAEKETKGAVYSLNAF 831
            Y  +GT   L EE   ++GR+++      + E G      K++ + EKE KG V +L   
Sbjct: 1045 YIVMGTNLSLGEEVT-SRGRVIIADIIEVVPEPGMPLTKHKIKTLYEKEQKGPVTALADI 1103

Query: 832  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 891
            NG L+ AI QK  LY W L+D+   +L        HI    + T    I+ GD++KS+S+
Sbjct: 1104 NGLLITAIGQK--LYIWQLKDN---DLMGVAFIDTHIYIHTLVTIKHIILAGDILKSVSV 1158

Query: 892  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEER 948
              Y+ E   +   +RD     +   + L D+  L    ++   NL       E       
Sbjct: 1159 YQYQEEHKVLSIVSRDPRPLEVYTADFLIDNTQLCCLVSDRMKNLVVYSYQPEARESHGG 1218

Query: 949  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD--VGQIP----TVIFGTVNGVIGVIASLP 1002
             RL    +++ G  V+        +  P SD  +   P       F T++G +G +  L 
Sbjct: 1219 QRLIRKADFNAGSNVSSMFRVRCKLYDPSSDKRMTGAPEKRHITYFATLDGSLGFVLPLS 1278

Query: 1003 HEQYLFLEKLQTNLRKVIKGVGGLNHEQWR----SFNNEKKTVDAKNFLDGDLIESFLDL 1058
             + Y  L  LQ  L   I  V GLN   +R    +F   +     KN LDG+L+  + +L
Sbjct: 1279 EKVYRRLFMLQNALVTHIPHVAGLNPRSYRHVIGTFPELRNP--QKNILDGELLWKYTNL 1336

Query: 1059 SRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            S     EI+K +  S +++   + E+ RL
Sbjct: 1337 SIMEKIEIAKRLGTSNDQIMDDLMEIDRL 1365



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 65/335 (19%), Positives = 133/335 (39%), Gaps = 59/335 (17%)

Query: 48  QGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV 107
           Q ++ +    ++G I +++  +  G  +D L ++    K  V+++D  + +L T ++   
Sbjct: 3   QKMECLATFTLFGNIMSMKYVKLPGALRDSLLLSFSEAKLSVVEYDPGTHDLQTTSLHFF 62

Query: 108 SDRIGRPTDNGQIGI--------IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNI--- 156
            +    P+  G            +DPD R   + +Y     ++PF     ++E  N+   
Sbjct: 63  EE----PSMKGGFFTNYCIPEVRVDPDGRCAAMLVYGTHMVILPFRRDVMVEEGDNLAGT 118

Query: 157 --------------RLEE--LQVLDIKFLYGCAKPTIVVLYQD-----NKDARHVKTYEV 195
                           +E  + V D +FL+G  +PT+ +L++       + A    T  +
Sbjct: 119 SKSPILSSYIIDLRNFDEKIINVKDFQFLHGYYEPTVFILFEPLQTWAGRTAVRADTCSI 178

Query: 196 ALKDKDFVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY---------CSA 242
                +  E      WS  +L      ++ VP P+ GV+II   +++Y          S 
Sbjct: 179 VAISLNLQEKVHPVIWSLGSLPFDCCQVLAVPRPIGGVIIIAVNSLLYLNQSVPPYGVSL 238

Query: 243 NAFKA----IPIR--PSITKAYGRVDADGSRY---LLGDHAGLLHLL-VITHEKEKVTGL 292
           N+  A     P+R    +  A     A    Y   +L    G L++L ++      V   
Sbjct: 239 NSISAQSTLFPLRVQEGVRIALDCCQAAFMSYDKIVLSLKGGELYVLTLVVDGMRSVRSF 298

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
             +    + + S +   ++  +++GS  G+S L+K
Sbjct: 299 NFDKSAASVLTSCMCICEDGFLFLGSRLGNSLLLK 333



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 39/250 (15%)

Query: 293 KIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYV-EVLERYVNLGPI 351
           K ++ G T IAS +S ++N  +Y    YG ++    N       SY  EV +   N+GP 
Sbjct: 359 KKKVEGSTEIASDVSQIEN--LYDLEVYGSAE----NPTSTTITSYTFEVCDNIWNIGPC 412

Query: 352 VDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGM 402
            +  + +   L  +         ++V  SG  K+G+L +++  I      + EL G   M
Sbjct: 413 GNIVMGEPAFLSEEFSSCEDPDIEMVMTSGYGKNGALSVLQRSIRPQVVTTFELPGCLDM 472

Query: 403 WSLRS------------STDDPFD-------TFLVVSFISETRILAMNLEDELEETEIEG 443
           W+++S            S +D  D       +FL++S    + IL      E+ E +  G
Sbjct: 473 WTVKSLVPKEKSEDKENSMEDDSDDNIEGGHSFLILSRSDSSMILETG--QEMNELDHSG 530

Query: 444 FCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 502
           F +QT T+F  +   ++ +VQV+  S+RL+    R++++         V  + A+   VL
Sbjct: 531 FSTQTTTIFAGNIGGDRYIVQVSDTSLRLLEGV-RQIQHIPLDTGSPVVQCSLADPYIVL 589

Query: 503 LATGGGHLVY 512
           L   G  L++
Sbjct: 590 LTQEGQILMF 599


>gi|302504585|ref|XP_003014251.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
 gi|291177819|gb|EFE33611.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
          Length = 460

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 33/350 (9%)

Query: 752  QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IV 808
             T   +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++   
Sbjct: 96   HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 155

Query: 809  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 866
            E+GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C     
Sbjct: 156  EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQIT 210

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
              + + +QT+G  I+V D+ +S++ ++YK++E A+   A D    W +   ++D +   G
Sbjct: 211  PRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAG 270

Query: 927  AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--- 980
             +   N++ +R   K SE A ++  G   +    +L    NR    SLV+     D+   
Sbjct: 271  GDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVIHFYSQDIPTS 327

Query: 981  --------GQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                    G    +++  + G +G+ +  +  +   F + L+  L      + G +H  +
Sbjct: 328  IQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIY 387

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
            R +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++
Sbjct: 388  RGY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKI 432


>gi|159123784|gb|EDP48903.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus fumigatus A1163]
          Length = 1401

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 37/371 (9%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 800
            ++++  +T+  I +Y L   EY  ++ +       N +       VGTA+    E+ P++
Sbjct: 1028 LKVVSPRTWTVIDSYSLGPDEYVMAVKNMDLEVSENTHERRNMIVVGTAFAR-GEDIPSR 1086

Query: 801  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 847
            G I VF V            D KL+LI ++  KGAV +L+   G+  L+AA  QK  +  
Sbjct: 1087 GCIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRG 1146

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  L         ++GD +K +    Y  E   +    +D
Sbjct: 1147 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD 1204

Query: 908  YNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
                 + A E L D      L A+++ NL  ++ + E        RL    ++H+G F  
Sbjct: 1205 QGYLEVVAAEFLPDGDKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLARSKFHMGHFAT 1264

Query: 965  RFR-------HGSLVMRLPDS---DVGQIPT-VIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
                           M  PDS   D   I   V+  + +G +G++ S+P E Y  L  LQ
Sbjct: 1265 TMTLLPRTMVSSEKAMANPDSMEIDSQTISQQVLITSQSGSVGIVTSVPEESYRRLSALQ 1324

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            + L   ++   GLN   +R+   E      +  LDG+L+  +LD+ + R  EI+  +   
Sbjct: 1325 SQLANSLEHPCGLNPRAYRAV--ESDGTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAH 1382

Query: 1074 VEELCKRVEEL 1084
              E+   +E +
Sbjct: 1383 EWEIKADLEAI 1393


>gi|146324727|ref|XP_747211.2| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus fumigatus Af293]
 gi|148886828|sp|Q4WCL1.2|CFT1_ASPFU RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|129556124|gb|EAL85173.2| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus fumigatus Af293]
          Length = 1401

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 37/371 (9%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 800
            ++++  +T+  I +Y L   EY  ++ +       N +       VGTA+    E+ P++
Sbjct: 1028 LKVVSPRTWTVIDSYSLGPDEYVMAVKNMDLEVSENTHERRNMIVVGTAFAR-GEDIPSR 1086

Query: 801  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 847
            G I VF V            D KL+LI ++  KGAV +L+   G+  L+AA  QK  +  
Sbjct: 1087 GCIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRG 1146

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  L         ++GD +K +    Y  E   +    +D
Sbjct: 1147 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD 1204

Query: 908  YNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
                 + A E L D      L A+++ NL  ++ + E        RL    ++H+G F  
Sbjct: 1205 QGYLEVVAAEFLPDGDKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLARSKFHMGHFAT 1264

Query: 965  RFR-------HGSLVMRLPDS---DVGQIPT-VIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
                           M  PDS   D   I   V+  + +G +G++ S+P E Y  L  LQ
Sbjct: 1265 TMTLLPRTMVSSEKAMANPDSMEIDSQTISQQVLITSQSGSVGIVTSVPEESYRRLSALQ 1324

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            + L   ++   GLN   +R+   E      +  LDG+L+  +LD+ + R  EI+  +   
Sbjct: 1325 SQLANSLEHPCGLNPRAYRAV--ESDGTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAH 1382

Query: 1074 VEELCKRVEEL 1084
              E+   +E +
Sbjct: 1383 EWEIKADLEAI 1393


>gi|302654423|ref|XP_003019019.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
 gi|291182709|gb|EFE38374.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
          Length = 460

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 33/350 (9%)

Query: 752  QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IV 808
             T   +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++   
Sbjct: 96   HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 155

Query: 809  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 866
            E+GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C     
Sbjct: 156  EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQIT 210

Query: 867  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
              + + +QT+G  I+V D+ +S++ ++YK++E A+   A D    W +   ++D +   G
Sbjct: 211  PRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAG 270

Query: 927  AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--- 980
             +   N++ +R   K SE A ++  G   +    +L    NR    SLV+     D+   
Sbjct: 271  GDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVIHFYSQDIPTS 327

Query: 981  --------GQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 1031
                    G    +++  + G +G+ +  +  +   F + L+  L      + G +H  +
Sbjct: 328  IQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIY 387

Query: 1032 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
            R +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++
Sbjct: 388  RGY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKI 432


>gi|384487281|gb|EIE79461.1| hypothetical protein RO3G_04166 [Rhizopus delemar RA 99-880]
          Length = 1468

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 153/693 (22%), Positives = 262/693 (37%), Gaps = 170/693 (24%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHL---------------- 44
           MS +        P  V +     FTSP   NLI+AK + ++I+                 
Sbjct: 1   MSAYTIYQELFPPQTVEYVETSQFTSPDATNLIVAKASLLQIYEFVEYVPEAVEEEEETP 60

Query: 45  -----------------LTPQGLQP-----MLDVPIYGRIATLELFRPHG---------- 72
                            LT   L+P     M+     GR+  +  F+ +G          
Sbjct: 61  SDNELANERLNDTEDINLTYPKLKPLKKGGMISDTTLGRLELVAQFKMNGIITTMGTVRT 120

Query: 73  ------EAQDFLFIATERYKFCVLQWDAESSELITRAMGDVS-DRIGRP--TDNGQIGI- 122
                 E  D L +     K  +L+W + ++ +IT ++     D   +   T+     I 
Sbjct: 121 NSPRGREGCDSLLLGFSDAKMSLLEWSSSTNSIITVSIHYYERDEFKKEFLTNPYPSAIH 180

Query: 123 IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE----------------AFNIRLEEL----- 161
           IDP  R    + YD    V+PF    +L E                +F I L  L     
Sbjct: 181 IDPQQRCAVFNFYDNKLAVLPFRQSDKLDERQGEGEEDEEKWPYYPSFIIDLATLDSRIK 240

Query: 162 QVLDIKFLYGCAKPTIVVLYQ----------DNKDARHVKTYEVALKDKDFVEGP--WSQ 209
            V+D+ FL    +PT+ +L+Q          +NKD   +    + +  K +   P  +S 
Sbjct: 241 NVIDMTFLSDYYEPTLAILFQPEQTWTGRLGNNKDTVSLVVISLDITAKIY---PIIYSI 297

Query: 210 NNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA----------------FKAIPIRPS 253
           + L      L+ +P P+ G+L+I   +I++ S  +                F  +   PS
Sbjct: 298 DKLPYDCFKLVAMPKPVTGMLVIAANSILHVSQGSPGMGVAVNGYTKKTTDFPGMIYEPS 357

Query: 254 ITK-----------AYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGE--- 299
           + +           A+G     G R L+    G   L+ +  +  KV G+ I  +     
Sbjct: 358 LIELGLSLEGAKALAFG-----GDRCLIFMQNGHWALVEVRRDGNKVVGMAISEIKHDLP 412

Query: 300 ------------TSIASTISYLDNA----VVYIGSSYGDSQLIK-----LNLQPDAKGSY 338
                         +AS  S + N       ++GS  GDS LIK     +N Q  A   +
Sbjct: 413 VMEKKPPRFDTPPLLASVPSCVTNVKAGEYFFLGSRVGDSLLIKYDANRVNHQSVAPPVF 472

Query: 339 VEVLERYVNLGPIVDFCVVDL------ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 392
             V +  +N GPIVD  V D+      E   Q ++V+ SG  K+G+L + +  I      
Sbjct: 473 -RVCDTMLNTGPIVDMAVGDVDTVEQQEDWPQLELVSSSGHGKNGALCVFQRHIYPQTSF 531

Query: 393 SVELQGIKGMWSLR-------SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFC 445
           +      + +WS++        + DD FD  L +S    T +L+    DEL+E +  GF 
Sbjct: 532 AFHQFDSQAIWSIKCRKNDQQQNEDDDFDKLLFISKSKSTLVLSAG--DELQEVKT-GFY 588

Query: 446 SQTQTLFCHDAI-YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 504
           ++  T+         ++VQV +  V +++   + ++     P G  +  A+ +   +LL 
Sbjct: 589 TRGSTIAVSTLFDATRIVQVYATGVMVLTPEGKRIQT-VPIPRGAKIVEASIHDPYILLT 647

Query: 505 TGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI 537
                ++ L+ GD    ++ H QL   I  + I
Sbjct: 648 LDNNKILALQ-GDASTKDIIHIQLPNHIKDVGI 679



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 156/372 (41%), Gaps = 50/372 (13%)

Query: 740  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPE 794
            E E   + L+   T+E +     + FE  C  L C+  D         YY +     L  
Sbjct: 1099 EMEQFSMILVSPVTWEIVDKVEFEEFEQ-CFSLECALLDSKQTSTGRKYYMIIGTGTLKG 1157

Query: 795  ENEPTKGRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            E+   KG I ++ I+E          + K + +  ++ KGAV ++   +G L A I  K+
Sbjct: 1158 EDTTMKGSIRMYDIIEVVPEPDNPQTNHKFKPVLTEDVKGAVTAMCTVSGHLAACIGSKV 1217

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
             +  W L DD    L         I    + +  +FI++GD  KSI  L ++ E   +  
Sbjct: 1218 IV--WSLEDD--ERLVGVAFIDVQIYVTSMSSIKNFILIGDAQKSIWFLGFQLEPAKLTL 1273

Query: 904  RARDYNANWMSAVEILDDD--IYL--GAEN-NFNLFTVRK---NSEGATDEERGRLEVVG 955
              +DY +  +  V+ + DD  +YL  G  N N +L+        S G       +L   G
Sbjct: 1274 LGKDYQSFDVGCVDFIIDDKSLYLIVGDTNENIDLYQYAPFNLQSFGGQ-----KLMRRG 1328

Query: 956  EYHLGEFVNRFRHGSLVMRLPD-------SDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 1008
            ++H+G  V        ++RLP         +  +    + GT NG I VI+S+  + +  
Sbjct: 1329 DFHVGSQVQ------TMVRLPQIEKTEKGFEYSRRHFCLCGTFNGSIAVISSISEKTFKR 1382

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK---TVDAKNFLDGDLIESFLDLSRTRMDE 1065
            L  L  +L   ++ V GLN   +R     K+   T   K  LDGDLI  F  LS     E
Sbjct: 1383 LNTLYGHLVNNLQHVAGLNPRAFRLIKGPKQRMSTNRTKAVLDGDLIFEFAGLSIEEQKE 1442

Query: 1066 ISKTMNVSVEEL 1077
             +K +  +V  +
Sbjct: 1443 TTKQIGTTVTRI 1454


>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
 gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
          Length = 1370

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 116/236 (49%), Gaps = 28/236 (11%)

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
           GDS ++KL    D +  +  +++   N+ PI D    D   +   Q+  C G   +GSLR
Sbjct: 441 GDSVVLKLK---DGRLCFTNLIQ---NIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLR 494

Query: 381 IVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
           ++++GI + +  +     +G+ G W++R    D + +FLV+SF+ ETRIL++ L    + 
Sbjct: 495 VIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGETRILSVGLSFT-DV 553

Query: 439 TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST----------SRELRNEWKSPPG 488
           T+  GF     TL C       LVQ+   +V+L   T          S  +   W  P  
Sbjct: 554 TDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDGHSEGIPLSSPICTSWY-PDN 612

Query: 489 YSVNVATANASQVLLATGGGHLVYLEIGDGILT-------EVKHAQLEYEISCLDI 537
            ++++     + ++++T     +++ +G  +L+       E++H +L+ E+SC+ I
Sbjct: 613 LNISLGAVGHNFIVVSTSNPCFLFI-LGVRMLSAYQYEIYEMQHLELQNEVSCISI 667



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 23/205 (11%)

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
            I VGD    I    Y  E   +E+   D +   ++   ++DD+  + ++   ++  +  +
Sbjct: 1134 IAVGDNRDGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTAIVSDRKGSIAVLCSD 1193

Query: 940  ----SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP-------- 984
                   A+ E   RL     Y + E     R GS   RLP  D+   G  P        
Sbjct: 1194 HLEAPNNASTECNLRLSCA--YFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVDSLQ 1251

Query: 985  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTV 1041
             T++  T+ G I +   L  E+Y  LE +Q  L    +   V G +H ++RS  N    V
Sbjct: 1252 NTILVSTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENP---V 1308

Query: 1042 DAKNFLDGDLIESFLDLSRTRMDEI 1066
                 LDGD++  FL+L+  + + I
Sbjct: 1309 GTPKILDGDMLTQFLELTNMQQNNI 1333



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 15/193 (7%)

Query: 625  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
            +G  P+ L          + A SDRP +++S+   + Y++++ +  SH  P  S   P  
Sbjct: 817  IGITPVFLVPLDDTLDADIIALSDRPWLLHSARHSISYTSISFQPSSHATPVCSIDCPKG 876

Query: 685  LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESE 742
            +    E  L +  +   ++L++R   L   PR++ +  +S+   +    L   +C  +  
Sbjct: 877  ILFVAENSLHLVEMVYSKRLNMRKFHLKGTPRKVLYHNESQMLLVMRTELSIGTCLSD-- 934

Query: 743  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA-YVLPE-----EN 796
               +  +D  +   +S++ L+  E   S+        S     VGT+ Y  P      E 
Sbjct: 935  ---ICCVDPLSGSVLSSFRLELGETATSMELIRVG--SEQVLVVGTSLYSGPPAIPSGEA 989

Query: 797  EPTKGRILVFIVE 809
            E  KGR+LV  ++
Sbjct: 990  ESAKGRLLVLCID 1002


>gi|121719617|ref|XP_001276507.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus clavatus NRRL 1]
 gi|148886827|sp|A1C3U1.1|CFT1_ASPCL RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|119404719|gb|EAW15081.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus clavatus NRRL 1]
          Length = 1401

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 56/413 (13%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 746
            ++ + +GEH   + +   S T+ + +  +      E+ E+H                  +
Sbjct: 969  LKKVAIGEHVDHLAYSISSETYVLGTSHSADFKLPEDDELHPEWRNEAISFLPELRQCCL 1028

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 801
            +++  +T+  I +Y L   E   ++ + +     N +       VGTA     E+ P +G
Sbjct: 1029 KVVHPKTWTVIDSYTLGPDEEIMAVKNMNLEVSENTHERKNMIVVGTALAR-GEDIPARG 1087

Query: 802  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKW 848
             I VF V            D KL+LI ++  KGAV +L+   G+  L+AA  QK  +   
Sbjct: 1088 CIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSEIGGQGFLIAAQGQKCMVRG- 1146

Query: 849  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
             L++DG+    +      ++  L         +VGD  K I    Y  E   +    +D 
Sbjct: 1147 -LKEDGSLLPVAFMDVQCYVNVLKELKGTGMCIVGDAFKGIWFAGYSEEPYKMSLFGKDL 1205

Query: 909  NANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 965
                + A + L D      L A+++ NL  ++   E        +L V  ++H+G F + 
Sbjct: 1206 EYPEVVAADFLPDGDKLFILVADSDCNLHVLQYEPEDPMSSNGDKLLVRSKFHMGHFTST 1265

Query: 966  FR-----HGSLVMRLPDSDVGQIPT------VIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
                     S  +   DSD  ++        V+  + +G IG++ S+P E Y  L  LQ+
Sbjct: 1266 LTLLPRTTASYEIPSADSDSMEVDPRITPQQVLITSQSGSIGIVTSIPEESYRRLSALQS 1325

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 1067
             L   ++   GLN   +R+   E      +  LDG+L+  +L +S+ R  EI+
Sbjct: 1326 QLANTVEHPCGLNPRAYRAI--ESDGTAGRGMLDGNLLYQWLSMSKQRRMEIA 1376


>gi|358348118|ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
 gi|355504031|gb|AES85234.1| DNA damage-binding protein, partial [Medicago truncatula]
          Length = 822

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 116/236 (49%), Gaps = 28/236 (11%)

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
           GDS ++KL    D +  +  +++   N+ PI D    D   +   Q+  C G   +GSLR
Sbjct: 441 GDSVVLKLK---DGRLCFTNLIQ---NIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLR 494

Query: 381 IVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
           ++++GI + +  +     +G+ G W++R    D + +FLV+SF+ ETRIL++ L    + 
Sbjct: 495 VIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGETRILSVGLSFT-DV 553

Query: 439 TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST----------SRELRNEWKSPPG 488
           T+  GF     TL C       LVQ+   +V+L   T          S  +   W  P  
Sbjct: 554 TDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDGHSEGIPLSSPICTSWY-PDN 612

Query: 489 YSVNVATANASQVLLATGGGHLVYLEIGDGILT-------EVKHAQLEYEISCLDI 537
            ++++     + ++++T     +++ +G  +L+       E++H +L+ E+SC+ I
Sbjct: 613 LNISLGAVGHNFIVVSTSNPCFLFI-LGVRMLSAYQYEIYEMQHLELQNEVSCISI 667


>gi|358348106|ref|XP_003638090.1| DNA damage-binding protein, partial [Medicago truncatula]
 gi|355504025|gb|AES85228.1| DNA damage-binding protein, partial [Medicago truncatula]
          Length = 642

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 116/236 (49%), Gaps = 28/236 (11%)

Query: 321 GDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 380
           GDS ++KL    D +  +  +++   N+ PI D    D   +   Q+  C G   +GSLR
Sbjct: 261 GDSVVLKLK---DGRLCFTNLIQ---NIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLR 314

Query: 381 IVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 438
           ++++GI + +  +     +G+ G W++R    D + +FLV+SF+ ETRIL++ L    + 
Sbjct: 315 VIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGETRILSVGLSFT-DV 373

Query: 439 TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST----------SRELRNEWKSPPG 488
           T+  GF     TL C       LVQ+   +V+L   T          S  +   W  P  
Sbjct: 374 TDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDGHSEGIPLSSPICTSWY-PDN 432

Query: 489 YSVNVATANASQVLLATGGGHLVYLEIGDGILT-------EVKHAQLEYEISCLDI 537
            ++++     + ++++T     +++ +G  +L+       E++H +L+ E+SC+ I
Sbjct: 433 LNISLGAVGHNFIVVSTSNPCFLFI-LGVRMLSAYQYEIYEMQHLELQNEVSCISI 487


>gi|25148482|ref|NP_500157.2| Protein CPSF-1 [Caenorhabditis elegans]
 gi|22096347|sp|Q9N4C2.2|CPSF1_CAEEL RecName: Full=Probable cleavage and polyadenylation specificity
            factor subunit 1; AltName: Full=Cleavage and
            polyadenylation specificity factor 160 kDa subunit;
            Short=CPSF 160 kDa subunit
 gi|373220398|emb|CCD73182.1| Protein CPSF-1 [Caenorhabditis elegans]
          Length = 1454

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 146/312 (46%), Gaps = 29/312 (9%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE ++PT  R         K++++ +KE KG V  L A NG LL  + QK+  + W  
Sbjct: 1153 VVPEPDQPTSNR---------KIKVLFDKEQKGPVTGLCAINGLLLCGMGQKV--FIWQF 1201

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN- 909
            +D+    + S    H ++  L+  +     +  D  +S+SL+ ++ +  A+   +RD   
Sbjct: 1202 KDNDLMGI-SFLDMHYYVYQLH--SLRTIAIACDARESMSLIRFQEDNKAMSIASRDDRK 1258

Query: 910  -ANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN- 964
             A    A +++ D  ++G   ++   N+       E        RL V    ++G  +N 
Sbjct: 1259 CAQPPMASQLVVDGAHVGFLLSDETGNITMFNYAPEAPESNGGERLTVRAAINIGTNINA 1318

Query: 965  --RFRHGSLVMRLPDSD----VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
              R R  + +++L + D    + Q  T +F +++G  G +  L  + Y  L  LQT +  
Sbjct: 1319 FVRLRGHTSLLQLNNEDEKEAIEQRMTTVFASLDGSFGFVRPLTEKSYRRLHFLQTFIGS 1378

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            V   + GL+ +  RS    +  V   +A+N +DGD++E +L LS     ++++ + V   
Sbjct: 1379 VTPQIAGLHIKGSRSAKPSQPIVNGRNARNLIDGDVVEQYLHLSLYDKTDLARRLGVGRY 1438

Query: 1076 ELCKRVEELTRL 1087
             +   + +L R+
Sbjct: 1439 HIIDDLMQLRRM 1450



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 153/395 (38%), Gaps = 96/395 (24%)

Query: 124 DPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTIV 178
           DP  R     +Y     ++PF    +   ++ I L+++      + D+ FL G  +PTI+
Sbjct: 145 DPSNRCAACLVYGKHIAILPFHENSKRIHSYVIPLKQIDPRLDNIADMVFLDGYYEPTIL 204

Query: 179 VLYQDNK----------DARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCG 228
            LY+  +          D   +    V + D+ F    W   NL      L+P+P PL G
Sbjct: 205 FLYEPIQTTPGRACVRYDTMCIMGVSVNIVDRQFAV-VWQTANLPMDCSQLLPIPKPLGG 263

Query: 229 VLIIGEETIVYCSA-------------NAFKAIPIRPSITKAYGRVDADGSRYL------ 269
            L+ G  T+VY +              + F   P++  +      +D   S Y+      
Sbjct: 264 ALVFGSNTVVYLNQAVPPCGLVLNSCYDGFTKFPLK-DLKHLKMTLDCSTSVYMEDGRIA 322

Query: 270 LGDHAGLLHL--LVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIK 327
           +G   G L L  L+ +     V  L+   + ETSIA +++      +++GS  GDSQL++
Sbjct: 323 VGSRDGDLFLLRLMTSSGGGTVKSLEFSKVYETSIAYSLTVCAPGHLFVGSRLGDSQLLE 382

Query: 328 LNL---------------QPDAKGSYVEV------------------------------- 341
             L                 D   + +E+                               
Sbjct: 383 YTLLKTTRDCAVKRLKIDNKDPAAAEIELDEDDMELYGGAIEEQQNDDDEQIDESLQFRE 442

Query: 342 LERYVNLGPIVDFCV----------VDLERQGQ-GQVVTCSGAYKDGSLRIVRNGIGINE 390
           L+R  N+GP+   CV          VD +R+     +VT SG  K+G+L + +  +    
Sbjct: 443 LDRLRNVGPVKSMCVGRPNYMSNDLVDAKRRDPVFDLVTASGHGKNGALCVHQRSLRPEI 502

Query: 391 QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
             S  L+G + +W++    ++    +L+VS +  T
Sbjct: 503 ITSSLLEGAEQLWAVGRKENESH-KYLIVSRVRST 536


>gi|148886829|sp|A2R919.1|CFT1_ASPNC RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|134083776|emb|CAK47110.1| unnamed protein product [Aspergillus niger]
          Length = 1383

 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 97/438 (22%), Positives = 179/438 (40%), Gaps = 61/438 (13%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 746
            ++ + LGE    + +   S  + +  C   +    E+ E+H                 F+
Sbjct: 942  LKRVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPEDDELHPEWRNEAISFFPSARGSFI 1001

Query: 747  RLLDDQTFE---------FISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVL 792
            +L+ D   +          + ++ L   EY  +I + S     N +       VGTA+  
Sbjct: 1002 KLVWDHHLQRQDSVILIFHLHSFSLGADEYVMAIKNISLEVSENTHERKDMIVVGTAFAR 1061

Query: 793  PEENEPTKGRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
              E+ P++G I VF V            D KL+LI ++  KGAV +L+   G+    + Q
Sbjct: 1062 -GEDIPSRGCIYVFEVVQVVPDPDHPETDRKLKLIGKEPVKGAVTALSEIGGQGFVLVAQ 1120

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 901
              +     L++DG+    +      ++  +         ++GD +K +    Y  E   +
Sbjct: 1121 GQKCMVRGLKEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGVWFAGYSEEPYKM 1180

Query: 902  EERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
               A+D +   + A E L D   L    A+++ N+  ++ + E        RL    ++H
Sbjct: 1181 SLFAKDLDYLEVCAAEFLPDGKRLFIVVADSDCNIHVLQYDPEDPKSSNGDRLLSRSKFH 1240

Query: 959  LGEFVNRFRHGSLVM----RLPDSDVG-----QIP--TVIFGTVNGVIGVIASLPHEQYL 1007
            +G F +        M    ++  S  G     Q P   V+  T NG +G+I  +P E Y 
Sbjct: 1241 MGNFASTLTLLPRTMVSSEKMVSSSDGMDIDNQSPLHQVLMTTQNGSLGLITCIPEESYR 1300

Query: 1008 FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 1067
             L  LQ+ L   ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+
Sbjct: 1301 RLSALQSQLTNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIA 1358

Query: 1068 KTMNVSVEELCKRVEELT 1085
              +     E+   +E ++
Sbjct: 1359 GRVGAREWEIKADLEAIS 1376


>gi|443684051|gb|ELT88095.1| hypothetical protein CAPTEDRAFT_161045 [Capitella teleta]
          Length = 1410

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 180/433 (41%), Gaps = 58/433 (13%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE--------ESEMHFVRLLDD------ 751
            +R +PL   P  + +   S+T+++ S +   C +        E E+  V+  D       
Sbjct: 979  VRKVPLRCTPHFVVYHPDSKTYSVVSSQQVPCTQLVRVAGDGEKEIEAVQKDDRFVFPIM 1038

Query: 752  -----QTFEFISTYP-------LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPE 794
                 Q F  +S  P       L+ +E+   I + +   +  +     Y  VGT      
Sbjct: 1039 NKFNIQLFSPVSWEPIPNTRFDLEEWEHVMCIKTINLKSEGTLSGLKGYVVVGTNLNY-N 1097

Query: 795  ENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            E+  ++G++ ++ V D            K++++  KE KG V +L+   G L+ AI QK+
Sbjct: 1098 EDVSSRGKLTIYDVIDVVPEPGQPLTKNKIKVVYNKEQKGPVTALDGVQGFLVTAIGQKV 1157

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
              Y W L+D+   +L         I    ++   + I++GD+ KSIS+L Y+ +   +  
Sbjct: 1158 --YIWQLKDN---DLAGIAFIDTQIYIHKMEALKNLIIIGDVCKSISVLRYQEDMKVLSL 1212

Query: 904  RARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 960
             ++D     +  V  L D+  L    A+   N        +    +   RL    + ++G
Sbjct: 1213 VSKDVRPLAVYGVAYLVDETSLAFIVADKLKNFLVYCYQPDLVQSQGGQRLIRKADINIG 1272

Query: 961  EFVNRFRHGSLVMRLP-----DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
              VN F      +  P     D  +       + T++G IG +  +    Y  L  LQ  
Sbjct: 1273 SLVNAFFRVKCRVSDPSTSKTDQSLAMKHITYYVTLDGSIGYLLPISESLYRRLYMLQKM 1332

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            L + ++   GLN + +R+   E + +    +N +DGDL   +L L+     E++K +  +
Sbjct: 1333 LIQQVQQTAGLNPKAYRTCQTEFRQLINIQRNIIDGDLAWKYLALTSHDRAEMAKRIGTT 1392

Query: 1074 VEELCKRVEELTR 1086
              ++   + E+ R
Sbjct: 1393 SHQIEDDLLEIDR 1405



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 88/407 (21%), Positives = 165/407 (40%), Gaps = 85/407 (20%)

Query: 9   TAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGL 50
           T H PT V  S   NF +  + NL+ A   +I ++ L                    Q L
Sbjct: 7   TLHPPTTVERSVYCNFFNNSQKNLVTAGVNQIRVYRLVAESKPVEKESHTTETKSAKQKL 66

Query: 51  QPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDR 110
           + + D  + G ++++E     G A+D L +  E  K  +  +D ++ +L T ++    D 
Sbjct: 67  ECVADYELCGNVSSIESISLVGAARDALLLCFEEAKLSLCDYDPDTDDLKTISLHYFEDA 126

Query: 111 IGRPTDNG--QIGI------IDPDCRLIGLHLYDGLFKVIPFD--------------NKG 148
                +NG  Q G+      +DP+ R   + +Y     V+PF               +K 
Sbjct: 127 ---DLENGCCQRGLHHSEVRVDPEGRCAVMLIYGTHLIVLPFRKESPSDEIDATSCASKS 183

Query: 149 QLKEAFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQD----------NKDARHVKTY 193
            +   + I L  L      V+DI+FL+G  +PT+++LY+            KD   +   
Sbjct: 184 PIMSTYIIDLRTLDERVTNVVDIQFLHGYYEPTVLILYEPLPTWTCRVAVRKDTCSIVAI 243

Query: 194 EVALKDKDFVEGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY---------CSA 242
            + L+DK     P  WS +NL        PVP P+ GV++    +++Y          S 
Sbjct: 244 SLNLQDKTH---PIIWSHSNLPYDCLRTFPVPKPIGGVIVFAVNSLLYLNQSFPPYGVSL 300

Query: 243 NAFKAIP----------IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEK-VTG 291
           N+  +            +R S+  A      D  + ++    G L++L +  +  + V  
Sbjct: 301 NSLTSFNTEFLLKPQEGVRMSLDCAQAEF-IDNDKLVISLKGGELYVLTLVIDSMRAVRS 359

Query: 292 LKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLN-LQPDAKGS 337
             ++    + + + +    +  +++GS  G+S L++    +P+A  S
Sbjct: 360 FHLDKAAASVLTTCMCMCGDNYLFLGSRLGNSLLLRYQEKKPEASSS 406



 Score = 39.7 bits (91), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 37/278 (13%)

Query: 284 HEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLE 343
             KEK+T L I L+G + + S +  LD   VY      DSQ ++     D      EV +
Sbjct: 415 QRKEKMT-LAIGLVGSSDV-SKLDDLDELEVY----GRDSQAVE---SEDITQFMFEVCD 465

Query: 344 RYVNLGPIVD-------FCVVDLERQGQG--QVVTCSGAYKDGSLRIVRNGIGINEQASV 394
             +N+GP          F   +   Q     ++VT SG  K+G++ I++  I      + 
Sbjct: 466 SIINIGPCGQVEMGEPAFLSEEFSHQEDPDLELVTTSGYGKNGAISILQRQIRPQVVTTF 525

Query: 395 ELQGIKGMWSLRSSTDDPFDT---------FLVVSFISETRILAMNLEDELEETEIEGFC 445
           EL G   +W++  S D+   +         FL++S    + +L      E+ E +  GFC
Sbjct: 526 ELPGCTDVWTVLGSPDEQQGSDEKLAGSHAFLLLSRADSSMVLETG--QEIMELDHSGFC 583

Query: 446 SQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR--ELRNEWKSPPGYSVNVATANASQVL 502
           +   T+   +    + +VQV   ++ L+    R   L  +  SP    V+ + A+   +L
Sbjct: 584 TDAPTVHAANIGNGRYIVQVGPNAIWLLKGVERIQHLALDVSSP---VVSCSLADPHVLL 640

Query: 503 LATGGG--HLVYLEIGDGILTEVKHAQLEYEISCLDIN 538
           L   G   HLV    GD     +   +L  +   + IN
Sbjct: 641 LCEDGQLLHLVLSVQGDDPTLSLLTTKLHQKSKVIAIN 678


>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
          Length = 541

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 43/296 (14%)

Query: 811  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHIL 869
            GKL+L+ +        +L AFNG+L+A + + +++Y     D G R+L  +C   H   L
Sbjct: 259  GKLELVHKTPIDDYPGALAAFNGRLMAGVGRMLRMY-----DIGRRKLLRKCENRHIPNL 313

Query: 870  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
               ++T G  I V D+ +S+  + YK  E  +   A D N  W++   +LD D  +   +
Sbjct: 314  IADIKTIGQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDT-VAMSD 372

Query: 930  NFNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGS 970
             F    V +     +D+            +RG L       EVV  +H+GE V   +  +
Sbjct: 373  KFGNVAVMRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKGEVVVNFHVGETVTSLQRAT 432

Query: 971  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLN 1027
            L+        G    +++ T  G +G +  LP    E +   + L+ ++R     + G +
Sbjct: 433  LI-------PGGSEALLYATAGGALGAL--LPFTSREDHDXFQHLEMHMRSENAPLCGRD 483

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
            H  +RS+         KN +DGDL E F  L   +   I+  +  +  E  K++E+
Sbjct: 484  HLSFRSY-----YYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTPAEGSKKLED 534


>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
 gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
          Length = 1220

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
           N+ PI+D  VVD   + Q Q+  C G   +GSLRI+R+GI + +  + +   QG+ G W+
Sbjct: 460 NIAPILDMSVVDHHDEKQEQMFGCCGVAPEGSLRIIRSGISVEKLLRTAPIYQGVTGTWA 519

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           LR    D + +F+V+SF+ ETR+L++ +    + T+  GF     TL C       LVQ+
Sbjct: 520 LRMKVTDLYHSFVVLSFVEETRVLSVGVSFA-DVTDSAGFLPNVCTLACGLVGDGLLVQI 578

Query: 465 TSGSVRLVSST 475
              +VRL   T
Sbjct: 579 HQTAVRLCLPT 589



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 15/193 (7%)

Query: 625 LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 684
           +G  P+ L   +      + A SDRP ++ ++   L Y++++ +  +H  P  S   P  
Sbjct: 725 IGVTPVFLVPLTDSLDADMIALSDRPWLLQTARHGLSYTSISFQPSTHSTPVCSVECPKG 784

Query: 685 LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESE 742
           L    E  L +  +   ++L+++   LG  PR++ +  +SR   +    L N +C+ +  
Sbjct: 785 LLFVAENSLHLVEMVHSKRLNVQKFHLGGTPRKVLYHSESRLLLVMRTELSNDTCSSD-- 842

Query: 743 MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-EN 796
              +  +D  +   +S++ L+  E G S+       +  +   VGT+      ++P  E 
Sbjct: 843 ---ICCVDPLSGSVVSSFKLEHGETGKSMELVRVGTEQVLV--VGTSLSSGPAIMPSGEA 897

Query: 797 EPTKGRILVFIVE 809
           E TKGR++V  +E
Sbjct: 898 ESTKGRLIVLCLE 910


>gi|301773406|ref|XP_002922132.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1-like [Ailuropoda
            melanoleuca]
          Length = 1469

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 186/464 (40%), Gaps = 87/464 (18%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 1015 IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1074

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1075 KVYAVATSTNMPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1134

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1135 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1193

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1194 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1248

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1249 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1308

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1309 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1362

Query: 981  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 1029
             + P+             F T++G IG++  LP ++       +TN  +       L H 
Sbjct: 1363 AEGPSKKSVVWENKHITWFATLDGGIGLL--LPMQE-------KTNRLQPAXSPRML-HV 1412

Query: 1030 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              R   N       +N LDG+L+  +L LS     E++K +  +
Sbjct: 1413 DRRILQNA-----VRNVLDGELLNRYLYLSTMERGELAKKIGTT 1451



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 61/326 (18%), Positives = 141/326 (43%), Gaps = 60/326 (18%)

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GDVSDRIG 112
            +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      ++ D   
Sbjct: 112 FFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFV 171

Query: 113 RPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FN 155
           +     ++ + DPD R   + +Y     V+PF       +++G + E            +
Sbjct: 172 QNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIID 230

Query: 156 IR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEG-- 205
           +R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +  +   
Sbjct: 231 VRGLDEKLLNIVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVH 290

Query: 206 P--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPI 250
           P  WS  +L       + VP P+ GV++    +++Y +                  A P+
Sbjct: 291 PVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNGLTTGTTAFPL 350

Query: 251 RPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETS 301
           R   T+   R+  D +        + ++    G +++L +IT     V     +    + 
Sbjct: 351 R---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASV 407

Query: 302 IASTISYLDNAVVYIGSSYGDSQLIK 327
           + +++  ++   +++GS  G+S L+K
Sbjct: 408 LTTSMVTMEPGYLFLGSRLGNSLLLK 433


>gi|297792471|ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309955|gb|EFH40379.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1444

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 20/300 (6%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 809
            +E  +T P+ + E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1099 WETKATIPMQSSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1157

Query: 810  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1158 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1213

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1214 DAPPLYVVSMNVVKTFILLGDVHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGN 1273

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             L    ++   N+       + A   +  +L    E+H+G  V +F    L M    +D 
Sbjct: 1274 TLSLAVSDEQKNIQVFYYAPKMAESWKGQKLLSRAEFHVGSHVTKFLR--LQMVTSGADK 1331

Query: 981  GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 1040
                 ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F    K 
Sbjct: 1332 TNRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPHSFRQFRTSGKA 1391



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 159/407 (39%), Gaps = 116/407 (28%)

Query: 155 NIR-LEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFV---------- 203
           N+R LE   V D  FL+G  +P IV+L ++     H     V+ K    V          
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEE----EHTWAGRVSWKHHTCVLSALSINTTL 295

Query: 204 -EGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGR 260
            + P  WS  NL + A  L+ VP P+ GVL++   TI Y S +A  A+ +    + A   
Sbjct: 296 KQHPVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSS 355

Query: 261 VDADGSRY-----------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIA 303
            +   S +                 LL   +G L LL + ++   V  L +     + +A
Sbjct: 356 QELPASNFSVELDAAHGTWISSDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLA 415

Query: 304 STISYLDNAVVYIGSSYGDSQLI------------------------------KLNLQPD 333
           S I+ + N++ ++GS  GDS L+                              +L +  D
Sbjct: 416 SDITSVGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRLRISSD 475

Query: 334 -----------------------AKGSY-VEVLERYVNLGPIVDFC----------VVDL 359
                                  A+ S+   V +  VN+GP+ DF              +
Sbjct: 476 TFQDTIGNEELSLFGSTPNNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGV 535

Query: 360 ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------------- 405
            +Q   ++V CSG  K+G+L ++R  +       VEL G KG+W++              
Sbjct: 536 SKQSNYELVCCSGHGKNGALCVLRQSVRPEMITEVELPGCKGIWTVYHKSSRGHNADSSK 595

Query: 406 RSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
            ++ +D +  +L++S   E R + +   D L E TE   +  Q +T+
Sbjct: 596 MAADEDEYHAYLIISV--EARTMVLETADLLTEVTESVDYYVQGRTI 640


>gi|145348791|ref|XP_001418827.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579057|gb|ABO97120.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1386

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 163/387 (42%), Gaps = 72/387 (18%)

Query: 11  HKPTNVTHSCVGNFTSP----QELNLIIAKCTRIEIHLLTPQGLQPMLDV----PIYGRI 62
           H PT V H+    FT P     + NLI+A   RI ++ +  +G +  LDV       G I
Sbjct: 10  HPPTGVDHAVTAYFTRPVGDGGDPNLIVASANRITVYAVNRRGDEESLDVCAEFDAQGAI 69

Query: 63  ATLELFRPHGEA----QDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG------ 112
            ++ + R    A    +D L IA    K  V+++DA + ++   +M      +G      
Sbjct: 70  GSMSVLRRRFGAPRNQRDALLIAIRERKLSVVEYDAATGDVCCSSMHSFESALGCNPLGT 129

Query: 113 --RPTDNGQIGIIDPDCRLIGLHL--------------YDGLFKVIPFDNKGQLK----- 151
             R +    + + DP+ R   + L               DG   ++  D++G+++     
Sbjct: 130 TLRMSREAPLVVSDPEGRCAAVVLREDGVAGKVRVLPSVDGGLGLVANDDEGRVRGPAAS 189

Query: 152 --EAFNIRLEELQVL-DIKFLYGCAKPTIVVLYQD----------NKDARHVKTYEVALK 198
             E+F + L  ++++ D  FL+G  +P + VLY+           +KD   +    V + 
Sbjct: 190 VRESFPLHLPGVRLIRDACFLHGYGEPALAVLYEKTPTWAGRYNLSKDTCEIVALSVDV- 248

Query: 199 DKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAY 258
           DK      W + NL + +  L  + PPL G L+  ++ +++ S  +   + +    T  +
Sbjct: 249 DKQKGTVIWRRQNLPSSSYKLTALLPPLGGALVFSQDFLLHESQESSSVLGLN---TFGH 305

Query: 259 G--------RVDADGS--------RYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSI 302
           G         +  DG+        R L+    G L LL +  +   +  + ++  G   +
Sbjct: 306 GGPQEGNDAEITLDGAQASVVSEDRVLVTTKTGALLLLALHTDGRSLRRMMLQRAGGAVL 365

Query: 303 ASTISYLDNAVVYIGSSYGDSQLIKLN 329
           +S +  L   ++++GS  GDS L+K  
Sbjct: 366 SSGMCLLSRDLLFLGSRIGDSLLVKFT 392



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 165/390 (42%), Gaps = 41/390 (10%)

Query: 717  RICHQEQSRTFAICSLKNQSCAEESEMHF---VRLLDDQTFEFISTYPLDTFEYGCSILS 773
            R   Q+     A+  ++ +      +M     VRLL   + +    + L+  E+   + +
Sbjct: 985  REIEQDNVHGIALAKVRRERAKANDDMELQYSVRLLVPGSLDSAWQHALEPGEHVQCVRN 1044

Query: 774  CSFSDDSN----VYYCVGTAYVLPE-ENEPTKGRILVFIV--------EDG---KLQLIA 817
                D +         VGTA  +P  E+ P +GR+++F +         DG   K Q+  
Sbjct: 1045 VQLRDINTGALLSLLAVGTA--MPGGEDTPCRGRVILFQMVWERDAESMDGYRWKGQVCC 1102

Query: 818  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 877
             +E K A  +L+A +G L+ A+  K+ ++ W    DG  EL S       I  + +    
Sbjct: 1103 VREAKMACTALSALDGHLIVAVGTKLTVHTW----DGV-ELNSVAFFDTPIHTVSINVVK 1157

Query: 878  DFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDDDI---YLGAENNFN 932
            +FI+VGDL K +    +K    E +I + ++D++   + + E L D      LG++ + N
Sbjct: 1158 NFILVGDLEKGLHFFRWKANGFEKSIIQLSKDFDRMDVVSTEFLIDGATLSLLGSDMSGN 1217

Query: 933  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TV 986
                  + +     +  +L V   YH+G  ++R    ++      +  G+ P       V
Sbjct: 1218 ARIFGYDPKSLESWKGQKLLVRSAYHVGSPISRMVRFNVEGTTAKAAPGERPKGTNRHAV 1277

Query: 987  IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS---FNNEKKTVDA 1043
             FGT++G +G+        Y  L  LQ  L   ++   G N   +R+   F  +   + A
Sbjct: 1278 FFGTLDGALGIFMPTDEPTYAKLHALQRELNTTVRSPIGCNPRTFRTPKVFEGKHVQLLA 1337

Query: 1044 K-NFLDGDLIESFLDLSRTRMDEISKTMNV 1072
              + LDG L+  F  L+ T    +++   V
Sbjct: 1338 PLDVLDGGLLSKFETLTFTEQRAVAERSGV 1367


>gi|225679191|gb|EEH17475.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 1377

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 182/421 (43%), Gaps = 46/421 (10%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-------FVRLLDDQTFEFI 757
            R I LGE    + +   S T+ + + +  +    E+ E+H        V+LL+ +T+  I
Sbjct: 954  RKIGLGEQVDSVEYSSSSETYVLGTSQKVDFKLPEDDEIHPEWRNEESVKLLNPRTWSII 1013

Query: 758  STYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV---- 808
             +Y L T E      C  L  S  + +      VGTA    E+    +G I VF V    
Sbjct: 1014 DSYQLRTAERVMCVKCLNLEASEITHERKEMIAVGTALTRGEDIA-ARGCIYVFEVIKVV 1072

Query: 809  -------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWMLRDDGTRELQ 859
                    + KL+LIA++E KGA+ SL+   G+  L+AA  QK  +    L++DG+    
Sbjct: 1073 PEVDRPETNRKLKLIAKEEVKGAITSLSGIGGQGFLIAAQGQKCIVRG--LKEDGSLLPV 1130

Query: 860  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
            +      ++  L         ++GD +K +    Y  E   +   ++D  +  + A + L
Sbjct: 1131 AFMDMQCYVSVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKDDGSLQVMAADFL 1190

Query: 920  DDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR---HGSLVM 973
                    + A+++ N+  ++ + E     +  RL     +H G+F +        S++ 
Sbjct: 1191 PHGKRLFIMVADDDCNIHVLQYDPEDPGSAKGDRLLHRSTFHTGQFASTLTLLPRTSVLS 1250

Query: 974  RLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 1025
            + P+++         G +  V+  +  G I +I  +    Y  L  LQ+ +   ++   G
Sbjct: 1251 QGPEAEANAMDLDSSGPLHQVLVTSETGSIALITPVSEMAYRRLSALQSQMINTLEHPCG 1310

Query: 1026 LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
            LN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +   V E+   +E + 
Sbjct: 1311 LNPRAFRAV--ESDGIGGRGMVDGDLVQKWLDLGTQRKAEIASRVGADVWEIRADLEAIG 1368

Query: 1086 R 1086
            +
Sbjct: 1369 K 1369


>gi|83314897|ref|XP_730560.1| multisubunit cleavage/polyadenylation specificity factor subunit A
           [Plasmodium yoelii yoelii 17XNL]
 gi|23490318|gb|EAA22125.1| CPSF A subunit region, putative [Plasmodium yoelii yoelii]
          Length = 863

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 179/449 (39%), Gaps = 86/449 (19%)

Query: 604 HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS-------------------KNTTHVF 644
           +L  +++N     LT+R+K+++   PI  + F+                    K +  +F
Sbjct: 287 YLKKYIINSDNVLLTNRRKINVCRSPIKFKQFNKVCSEKNKIDINNNNNNTCVKKSNFLF 346

Query: 645 AASDRPTVIYSS-NKKLLYSNVNLKEVSHMCPFNS----AAFPDSLAIAKEGE------- 692
             SD P +IYS   KK+  S V++K +  +  FN       F +  +  K+ +       
Sbjct: 347 ICSDNPIIIYSDIKKKISLSKVSIKNIFLVDIFNDFDYLNPFHNFNSFKKKNQNNLYFIF 406

Query: 693 -----LTIGTIDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFV 746
                L I  +++I + +I+ IP      +I  H E       C  + +    ++    +
Sbjct: 407 FDGLSLYISHLNEINETYIQKIPFYRTVEKIAYHNESGLLITSCPTEEKHKTNKNLKQII 466

Query: 747 RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---------YCVGTAYVLPEENE 797
              +     F  +Y + + +Y  S + C +  + ++Y          CVGTA +    +E
Sbjct: 467 CFFNPHQNSFKYSYIIPS-KYNVSSI-CIYQINKDIYPNKSNINTLICVGTANINDRVSE 524

Query: 798 PTKGRILVFIVEDGKLQLIAEKE------TKGAVYSLNAFNGKLLAAINQK--------- 842
           P+ G I +F  +  K  L   K         G +  L  F  KL++ IN           
Sbjct: 525 PSSGHIYIFFAK-KKANLFEIKHIYTHNINVGGITHLKQFYDKLISTINNTVIYKCVNKK 583

Query: 843 ------------IQLYKWM--------LRDDGTRELQSECGHHGHILALYVQTRGDFIVV 882
                       I L K++        L +DGT    +       I++L V    ++IVV
Sbjct: 584 LIVVILDISDFLINLDKYVDNTNKPIKLENDGTIVDVASFTPSSWIMSLDVI--ENYIVV 641

Query: 883 GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 942
           GD+M S+++L Y      + E  RDY+  W + V  L    +L ++   N    +K+S  
Sbjct: 642 GDIMTSVTILSYDFNNSTLTEVCRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSSIR 701

Query: 943 ATDEERGRLEVVGEYHLGEFVNRFRHGSL 971
             DE+  +L  V  ++ G  VN+    SL
Sbjct: 702 YNDEDSFKLSRVALFNHGHVVNKMLPVSL 730


>gi|47217773|emb|CAG05995.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1446

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 112/498 (22%), Positives = 196/498 (39%), Gaps = 106/498 (21%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 943  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1002

Query: 725  RT-------FAICSLKNQSC-------AEESEMHFV----------------RLLDDQTF 754
            +        +A+C+   + C        EE E   +                +L+   ++
Sbjct: 1003 KASLSHCCVYAVCTSVKELCTRIPRMTGEEKEYETIERDERYINPQQDKFSIQLISPVSW 1062

Query: 755  EFISTYPLD--TFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF- 806
            E I    +D   +EY   + + +      V     Y   GT  +  EE    +GRIL+  
Sbjct: 1063 EAIPNTRIDLEEWEYVTCMKTVALRSQETVSGLKGYIAAGTCLMQGEEVT-CRGRILILD 1121

Query: 807  ----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
                + E G      K +++ EKE KG V +L   NG L++AI QKI L  W+L+D+   
Sbjct: 1122 VIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WVLKDN--- 1176

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
            +L         +    + +  +FI+  DLMKS+SLL Y+ E   +   +RD     + ++
Sbjct: 1177 DLTGMAFIDTQLYIHQMMSIKNFILAADLMKSVSLLRYQEESKTLSLVSRDAKPLEVYSI 1236

Query: 917  EILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
            E + D+  LG   ++ + NL+      E        RL    +++ G  +N F       
Sbjct: 1237 EFMVDNSQLGFLVSDRDKNLYVYMYLPEAKESFGGMRLLRRADFNAGANINTF------W 1290

Query: 974  RLPDS---DVGQIPTVI--------FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 1022
            R+P     + G    +         F T++G +G++  +  + Y  L  LQ  L  ++  
Sbjct: 1291 RMPCRGALEAGSRKAMTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLSH 1350

Query: 1023 VGGLNHEQWRSFNNEKKTV---------------------------DAKNFLDGDLIESF 1055
              GLN + +R    ++ +                              KN LDG+L+  +
Sbjct: 1351 HAGLNPKAFRCVGADRTSAAMLSGMLPDFATSVSRMLHCDRRSLQNPVKNILDGELLNKY 1410

Query: 1056 LDLSRTRMDEISKTMNVS 1073
            L LS     E++K +  +
Sbjct: 1411 LYLSMMERSELAKKIGTT 1428



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/367 (20%), Positives = 156/367 (42%), Gaps = 65/367 (17%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT------------------PQGLQ 51
           AH PT V  S   NF S +E NL++A  +++ ++ +                    + L+
Sbjct: 8   AHTPTAVEFSVYCNFISSKEKNLVVAGTSQLFVYRIIHDVESTSKTDKSSDSKTRKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G + ++E  +  G  +D L ++ +  K  V+++D  + +L T ++    +  
Sbjct: 68  QVAAFSLFGNVMSMESVQLVGANRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 112 GRPT--DNGQIGIID-PDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKF 168
            R T  D  ++G+ + P    +  ++ D    V   D K             L ++D+KF
Sbjct: 128 LRDTLTDEQELGVGEGPKSSFLPTYIID----VRELDEK------------LLNIIDMKF 171

Query: 169 LYGCAKPTIVVLYQDNKD------ARHVKTYEVALK---DKDFVEGPWSQNNLDNGADLL 219
           L+G  +PT+++L++ N+        R  +   VA+     +      WS +NL      +
Sbjct: 172 LHGYYEPTLLILFEPNQTWPGRVAVRQAQCSIVAISLNIMQKVHPVIWSLSNLPFDCTQV 231

Query: 220 IPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPIR----PSITKAYGRVD 262
           + VP P+ GV++    +++Y +              N   A P+R      IT    + D
Sbjct: 232 MAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTNGTTAFPLRLQDEVKITLDCSQAD 291

Query: 263 ADG-SRYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                + ++    G +++L +IT     V     +    + + + +  ++   +++GS  
Sbjct: 292 FIAYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTCMVTMEPGYLFLGSRL 351

Query: 321 GDSQLIK 327
           G+S L+K
Sbjct: 352 GNSLLLK 358



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 35/166 (21%)

Query: 340 EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 390
           EV +  +N+GP  +  + +   L  + QG      +VV CSG  K+G+L +++  I    
Sbjct: 430 EVCDSILNIGPCANASMGEPAFLSEEFQGNPEPDLEVVVCSGHGKNGALSVLQRSIRPQV 489

Query: 391 QASVELQGIKGMWSLRSS-----------------------TDDPFDTFLVVSFISETRI 427
             + EL G   MW++ S+                        D     FL++S    T I
Sbjct: 490 VTTFELPGCHDMWTVISNEVKEDKKVPQSPGSFTATHYSLEEDTKKHGFLILSREDSTMI 549

Query: 428 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 472
           L      E+ E +  GF +Q  T+F  +   N+ ++QV+   +RL+
Sbjct: 550 LQTG--QEIMELDTSGFATQGPTVFAGNIGDNKYIIQVSPMGIRLL 593


>gi|295665178|ref|XP_002793140.1| cleavage and polyadenylation specificity factor subunit A
            [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278054|gb|EEH33620.1| cleavage and polyadenylation specificity factor subunit A
            [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1408

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 183/431 (42%), Gaps = 56/431 (12%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-----------------FVR 747
            R I LGE    + +   S T+ + + +  +    E+ E+H                  V+
Sbjct: 977  RKIGLGEQVDSVEYSSSSETYVLGTSQKVDFKLPEDDEIHPEWRNEVISFFPQIDKGSVK 1036

Query: 748  LLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGR 802
            LL+ +T+  I +Y L T E      C  L  S  + +      VGTA    E+    +G 
Sbjct: 1037 LLNPRTWSIIDSYQLRTSERVMCVKCLNLEASEITHERKEMIAVGTALTRGEDIA-ARGC 1095

Query: 803  ILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWM 849
            I VF V            + KL+LIA++E KGA+ SL+   G+  L+AA  QK  +    
Sbjct: 1096 IYVFEVIKVVPEVDRPETNRKLKLIAKEEVKGAITSLSGIGGQGFLIAAQGQKCIVRG-- 1153

Query: 850  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D  
Sbjct: 1154 LKEDGSLLPVAFMDMQCYVSVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKDDG 1213

Query: 910  ANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
            +  + A + L D   L    A+++ N+  ++ + E     +  RL     +H G+F +  
Sbjct: 1214 SLQVMAADFLPDGKRLYIMVADDDCNIHVLQYDPEDPGSAKGDRLLHRSTFHTGQFASTL 1273

Query: 967  R---HGSLVMRLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
                  S++ + P+++         G +  V+  +  G I +I  +    Y  L  LQ+ 
Sbjct: 1274 TLLPRTSVLSQGPETEANAMDLDLSGPLHQVLVTSETGSIALITPVSEMAYRRLSALQSQ 1333

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            +   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +   V 
Sbjct: 1334 MINTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVQKWLDLGTQRKAEIASRVGADVW 1391

Query: 1076 ELCKRVEELTR 1086
            E+   +E + +
Sbjct: 1392 EIRADLEAIGK 1402


>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
 gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
          Length = 1248

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 148/739 (20%), Positives = 295/739 (39%), Gaps = 106/739 (14%)

Query: 2   SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDV----P 57
           S++ Y VT  +P+    S  G+F+  +++  I    T + I L  P      LD      
Sbjct: 7   SLYLYNVTLKRPSYAISSVTGHFSGTKKVQEICI-ATSLTIELWRPNIDTGKLDKICVHN 65

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
           ++  I +LE  R  G  +D+L I ++  K  +LQ+D   +  IT      S    R    
Sbjct: 66  VFSVIQSLEKIRLMGSQKDYLVITSDSGKLAILQYDTGRNRFITMFQEPHSKTGFRRNTP 125

Query: 118 GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLY---GC 172
           G   + DP  R  LIG    + L   +  D+KG ++ +  +  +    + +       G 
Sbjct: 126 GAYLLTDPQNRAILIGALERNKLIYKVHSDDKGGMQISSPLESQTRHTITLAMCALDTGY 185

Query: 173 AKPTIVVLYQDNK--DARH------------VKTYEVALKDKDFVEGPWSQNNLDNGADL 218
             P  V +  D    D++             + +YE+  +  + V      N L   A  
Sbjct: 186 ENPVFVAIEADYGALDSKEHSIDPQAHQSLLLTSYELD-QGLNHVVRRVVNNKLPMTATH 244

Query: 219 LIPVPPPLCGVLIIGEETIVYCS---ANAFKAIPIRP----SITKAYGRVDADGSRYL-- 269
           LIP+P P  GVLI  E   +Y        +   PIR     ++   +       S YL  
Sbjct: 245 LIPLPSPAGGVLICCESYAIYEPFEYKRLYLPFPIRQDRENTVIINHVSQKFKKSNYLIL 304

Query: 270 ----LGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS-- 323
               LGD   L   L    E+E++  + +       ++++++ L +  ++  +++G+   
Sbjct: 305 AQTQLGD--CLKFSLHYNDEREQLDDITVSYFDTIPVSNSLNILRSGFLFANTAHGNKLF 362

Query: 324 -QLIKL--------------------------NLQPDAKG----SYVEVLERYVNLGPIV 352
            Q  KL                          + +P  KG    + V+V++   +L P+ 
Sbjct: 363 YQFEKLGEEGNDLTLRCSDHYEQVTTIDHSKRDFKP--KGLENLALVDVMD---SLNPVT 417

Query: 353 DFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGM-WSLRSSTDD 411
           D  +++         +          ++I+ +G+ +N+  +  L     + ++ +   + 
Sbjct: 418 DATLLETRTSESPDPLINLFTLSSRFIKILTHGMPVNQLVTSPLPIHPSLIFATKKFNNS 477

Query: 412 PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
             D +LV+S    ++ L +++ + +EE     F +    +       + +VQV S  +R 
Sbjct: 478 VNDDYLVISSELSSQTLVLSIGEVVEEVSDSEFVTDQPAIHVQQTGNSSIVQVFSNGIRS 537

Query: 472 VSSTSRELRN---------EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTE 522
           +    R +RN         +W  P G SV  A+ N++Q+++      + Y EI D +  +
Sbjct: 538 I----RHIRNGDEEIKKTTDWYPPAGISVTKASGNSTQLIIGMSNREVCYFEI-DPVDDQ 592

Query: 523 VKHAQLEYEIS----CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEH 575
           +   Q   E+S            ++P      A+   +D ++++ SL     L+++  + 
Sbjct: 593 LVEYQERLEVSGGSISSLAILSSKDPEQRSAHAIIGSSDETIQVVSLKRHNCLSVVALQA 652

Query: 576 LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 635
           L  +    S+L+   E   Y+   + +G  +  +++  +G+L+D +   LG++ + L   
Sbjct: 653 LSSK--STSILMLRHEDSIYVHIGMENGLYVCTMIDEVSGKLSDTRIKFLGSKSVRLSPI 710

Query: 636 ----SSKNTTHVFAASDRP 650
               S+     + A S RP
Sbjct: 711 KVPGSAGEEDGILALSSRP 729



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 50/305 (16%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHI 868
            L  I + E++ A +++  FN +LL      ++LY    K +LR     +  S   +  +I
Sbjct: 955  LLFIHKTESEFAPFAMIEFNNRLLIGTKNLLRLYDIGHKQLLR-----KASSSIDYFENI 1009

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
            + L     G+ I+  D   S + + Y   E      A D     ++++  LD D  +G +
Sbjct: 1010 IKL-TYMGGNRIMAADANISSTFVKYDQVENQFFPLADDIMKRKITSMCSLDYDTIVGGD 1068

Query: 929  NNFNLFTVR----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
               N+F  R                ++ +   +    RL+ + E++ G+    F  GSL+
Sbjct: 1069 KFGNIFVSRIPEVLSKQADQDWGLIRHQDSYLNGAVSRLKNLCEFYSGDIPTSFSKGSLI 1128

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK----------- 1021
            +    S+     T + GTV  +I ++     E   F+E L+  LR               
Sbjct: 1129 L---GSEESIFYTGLMGTVGALIPLVTK--SEVQFFIE-LEAELRGYFDYNFDNFDEQKN 1182

Query: 1022 --GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
               + G +H + RS+ N       KN +DGDLIE F ++S      I+  ++ + +++ K
Sbjct: 1183 GYNLLGKDHLKHRSYYNP-----VKNVIDGDLIERFSEVSYNNKIRIANKLDRTPKDIDK 1237

Query: 1080 RVEEL 1084
            ++ E+
Sbjct: 1238 KISEI 1242


>gi|240280498|gb|EER44002.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus H143]
          Length = 305

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 35/306 (11%)

Query: 799  TKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            T G I ++   E+GK L+ I + + +    +L  F G+LLA I   +++Y   ++    R
Sbjct: 9    TAGFIHIYRFQEEGKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQ-MLR 67

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
            + Q+    H   L + +QT+G  I+V D+ +S++ ++YK++E  +     D  + W +  
Sbjct: 68   KCQASVVPH---LVVGLQTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCT 124

Query: 917  EILDDDIYLGAENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYH 958
             ++D +   G +   NL+ +R   K SE A ++  G               RL +V  ++
Sbjct: 125  TMVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQYLQGAPNRLNLVAHFY 184

Query: 959  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 1018
              +     +   LV    D  V    T + GTV+ +I  I+    E+  F + L+  L  
Sbjct: 185  PQDLPTSIQKAQLVTGGRDILVW---TGLQGTVSMLIPFIS---REEVDFFQSLEMQLAA 238

Query: 1019 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
                + G +H  +RS+        AK  +DGDL E++L L   +  +I+  ++ SV E+ 
Sbjct: 239  QNPPLAGRDHLIYRSY-----YAPAKGTIDGDLCETYLLLPNDKKQQIAGELDRSVREIE 293

Query: 1079 KRVEEL 1084
            +++ ++
Sbjct: 294  RKIADM 299


>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
          Length = 1203

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 164/820 (20%), Positives = 308/820 (37%), Gaps = 114/820 (13%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFT-SPQELNLIIAKCTRIEIHLLTPQG--LQPMLDVPIY 59
           ++ Y +T          C+GNFT + ++  ++ A  T +E+  L         ++    +
Sbjct: 7   LFLYNLTIRPSVTAVKCCIGNFTGNRRQQEVVRATATTLELWKLNRNNGDFYKVVAQNTF 66

Query: 60  GRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQ 119
             I ++E  +  G  +D L I ++     VL+ + E     + +         R    G+
Sbjct: 67  SHIRSIEALKSSGSDKDLLIITSDSGNLTVLEMNNEKGRFESVSNEPYFKTGLRRISPGE 126

Query: 120 IGIIDPDCRLIGLHLYDGLFKVIPF--DNKGQLKEAFNIRLEELQVLDIKFL---YGCAK 174
              +D   R   +   +    V  F  D++ +L+ +  +   + +VL         G   
Sbjct: 127 YIAVDGRSRAAMISAIEKNKFVYKFTSDHRSRLQVSSPLEANKSKVLTFGVCGMDVGFEN 186

Query: 175 PTIVVL------YQDNKDARHVKT---YEVALKDKDFVEGPWSQNNLDNGADLLIPVPPP 225
           P    L      +++  D +  KT   YE+ +     V+    + +    ++ L+P+P  
Sbjct: 187 PQFAALECDYSDFEEKLDKKMHKTLCYYELDIGLNHVVKKYSEEASF--SSNFLLPLPGG 244

Query: 226 L---CGVLIIGEETIVY-CSANAFKAIPI-RPSITKAYGRVDADGSRYLLGDHAGLLH-- 278
                GVL+  E  I Y C +     IPI R S  K   R+       L      LL   
Sbjct: 245 TQGPSGVLLCSEGIIQYKCLSKMTHTIPIPRRSGDKTRSRIVCGVVHTLKNSFFALLQSE 304

Query: 279 ---LLVIT------------HEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS 323
              L  IT             E   V  ++I+      + +++       +Y     GD 
Sbjct: 305 LGDLFKITLDYVVQDSDESRGEAGMVNSMEIQYFDTMPVCTSLLIFRAGFLYANCESGDQ 364

Query: 324 QLIKLNL------------------------------QPDAKGSYVEVLERYVNLGPIVD 353
            L + +                               +P    + V ++E   N+ P++D
Sbjct: 365 YLYQFDKLGDENQRKFSSQDYPDEVAVLSDETTLFEPRPLENLNLVNIVE---NINPLID 421

Query: 354 FCVVDLERQGQGQVV-TCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDD 411
             + +        V+ +  G     +L+++ + +  +E  + EL  + + ++  + + DD
Sbjct: 422 AKLYNSNETTSLPVIYSLCGTGPRSALKVLNHELPFSEVVTQELPSVVQKVFVSKLNRDD 481

Query: 412 PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRL 471
            +D ++V+SF+  T  L + + +++EE E  G    T TL         LVQV    VR 
Sbjct: 482 EYDKYIVLSFVDGT--LVLRIGEDVEEVENSGLVLDTNTLGVFQVGSTALVQVHPNGVRQ 539

Query: 472 VSSTSRELRN--EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILTEVKHAQ 527
           V       +   +W  P G  V   +A  SQ+ +A     +VY E+   D ++   +H +
Sbjct: 540 VFYVDETPQKTIDWAPPAGIRVLHCSATNSQLAIALSNREIVYFELDDLDKLIEYNEHKE 599

Query: 528 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV- 585
           L  +I+ L +  +    +      V    D ++ +FS  P+  L   E +G EI+  +  
Sbjct: 600 LAAQITALTLGEVQAGTARFPYLLVA-CQDKTLTVFSTDPESTL---EIVGEEILSSAAS 655

Query: 586 LLCAF------------------------EGISYLLCALGDGHLLNFLLNMKTGELTDRK 621
            L AF                          + Y+   +  G      ++ +TGEL++ +
Sbjct: 656 SLMAFYMKDTAIVLNKDAGEDDEDEPELATSLLYVHIGMESGVYARLQMDPQTGELSNPR 715

Query: 622 KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 681
               G +P+ L    +     V   S R  + Y+   +   + +      H C F S   
Sbjct: 716 NKYTGPRPVQLSKIEAVGQNAVCIFSARTYLGYTRPSEFKITPLTKPVFQHACSFRSEDI 775

Query: 682 PDSLAIAKEG-ELTIGTIDDIQK-LHIRSIPLGEHPRRIC 719
           P++  +A  G  LTI TID ++    I SI L   P+ +C
Sbjct: 776 PENGVLAVYGNSLTIMTIDQLENDTIIESIALRNTPKYMC 815



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 43/301 (14%)

Query: 804  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQ 859
            L  I  +G L+L    +T+    +L AF GKLL     ++ LY    K +++   TR   
Sbjct: 921  LYRISSNGTLELFQTTKTEHLSLALTAFQGKLLVGAKNELILYDIGQKQLVKRSSTR--- 977

Query: 860  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 919
             EC        + ++T+G  ++V D+  S+   +YK  E +  +   D     ++   +L
Sbjct: 978  LECYE-----IVDLKTQGFRVIVSDVRDSVRYTVYKPLENSFVDFIDDTMQRHVTRTLLL 1032

Query: 920  DDDIYLGAENNFNLFTVR--KNSEGATDEE---------RGRLEVVGEYHLGEFVNRFRH 968
            D D  +  +   N+  +R  +     +DE+         R +L+    Y++G+    F+ 
Sbjct: 1033 DYDTVVVGDKFGNISVLRCPEQISEMSDEDNHGFLVKMRRTKLDNPVNYYVGDMPTFFQK 1092

Query: 969  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRKVIKGVGGLN 1027
            GSL        +G   ++I+G + G +G +  +    +  F ++LQ   R +I     L 
Sbjct: 1093 GSLT-------IGGAESIIYGCLQGQMGCLYPMKSLSEINFFKELQ---RLIIHEFTSLT 1142

Query: 1028 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS-------RTRMDEISKTMNVSVEELCKR 1080
              ++  F         KN +DGDLIE +  L         T+MD + + ++  + ++  R
Sbjct: 1143 DREYLKFKGYYNP--PKNSIDGDLIEEYYRLGPEKRIRIATKMDRLPRDIDRRISDMRSR 1200

Query: 1081 V 1081
            +
Sbjct: 1201 I 1201


>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
 gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
          Length = 1256

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 52/306 (16%)

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL----QSECGHHGHI 868
            L+ + + E      ++  FNG+LL  ++  ++LY     D G R+L     S   +  +I
Sbjct: 963  LEFVHKTELDYQPTAIIPFNGRLLVGMSNFLRLY-----DLGQRQLLRKASSNIEYLKNI 1017

Query: 869  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
            + L  Q  G  IVVGD   S + + Y   E      A D     ++A+  LD D  +G +
Sbjct: 1018 IRLTHQG-GSRIVVGDSSMSTTFVKYDSTENQFIPFADDIMKRQITALVTLDYDTIIGGD 1076

Query: 929  NNFNLFTVR----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 972
               N+F  R                +  E   +    RL+ + E++L +    F  GSLV
Sbjct: 1077 KFGNIFVSRVPETISQQSDKDWSLLRYQESYLNGSGSRLKNICEFYLQDIPTSFTKGSLV 1136

Query: 973  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVI--------KGV 1023
            M       G   ++I+  + G +G++  L  E  + FL  LQ  LRK          K  
Sbjct: 1137 M-------GGKESIIYTGIQGTLGLLLPLSTENEVKFLGDLQLLLRKYFDYNFDDFDKDK 1189

Query: 1024 GGLN-----HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
             G N     H ++RS+ N       KN +DGDLIE F +LS++    I   +N +  E+ 
Sbjct: 1190 NGYNLLGKDHLKFRSYYNP-----VKNVMDGDLIERFYELSQSMKIRIGTELNRTPREIE 1244

Query: 1079 KRVEEL 1084
            K++ E+
Sbjct: 1245 KKISEM 1250



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 155/740 (20%), Positives = 290/740 (39%), Gaps = 93/740 (12%)

Query: 2   SIWNYVVTAHKPTNVTHSCVGNFT-SPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
           S++ Y +T   P++   S VG F  + +   +I+A  T IE+         L+ +     
Sbjct: 7   SLYLYNLTIKHPSSCIASIVGQFLGNKKSQEIILANSTSIELWKADSNTGKLEKIYQQAS 66

Query: 59  YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
           +G I  ++  R  G  +D++ I ++  K  VL++D E  + +       S    R T  G
Sbjct: 67  FGIIQGIDKIRLVGTQKDYVVITSDSGKLVVLEFDIEKLQFVPLFQEPHSKNGLRRTSPG 126

Query: 119 QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLK-----EAFNIRLEELQV--LDIKF- 168
           +   +DP  R  LIG    + L   +  +++G+L+     E F+     LQ+  +D  F 
Sbjct: 127 EYLCVDPHNRAILIGAIEKNKLVYKVQSNDEGKLELSSPLETFSKHTLTLQICAMDTGFE 186

Query: 169 --LYGCAKPTIVVLYQDNKDARHVKTYEVALKDKDFVEG------PWSQNNLDNGADLLI 220
             ++   +       QDN +        + L   +  +G        S   +   +  LI
Sbjct: 187 NPMFAAIECDYNARQQDNGEEEDAGEASLLLNYYELDQGLNHVVKHKSNEKIPGSSSHLI 246

Query: 221 PVPPPLCGVLIIGEETIVYCSANAFK---AIPIRPS------ITKAYGRVDADGSRYLLG 271
           P+P  + G+L+  + TI+Y   +  K    IPIR +      +     R+  +    L+ 
Sbjct: 247 PLPDFIGGLLVCSKSTIIYAHPSKDKLYLPIPIRSNTNETLIVNHVIHRLKKNNFFILVQ 306

Query: 272 DHAGLLHLLVITHEK--EKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS---QLI 326
              G    + I H++  E +  + I       ++ +++   +  ++   +  +    Q  
Sbjct: 307 SQLGDCFKITIDHDEVNESIENINITYFDTIPLSQSLNIFKSGFLFANVATNNKLFYQFE 366

Query: 327 KL-------NLQPDAKGSYVEVLERYVN--------------------LGPIVDFCVVDL 359
           KL        LQ      Y  + E  ++                    L PI D  +++ 
Sbjct: 367 KLGDDNNNTTLQSCNFSDYNSIFELDISKRSFKVAGLENLALVDIMETLNPITDGALIET 426

Query: 360 ERQGQGQVVTCSGAYKDGS-LRIVRNGIGINEQASVELQGIK--GMWSLRSSTDDPFDTF 416
            R           A    S L+ + +GI  N   S  L  IK   + + R   +   D +
Sbjct: 427 LRPEVPDPFKQLTALSSHSYLKTLTHGISTNTVVSSPLP-IKPTAIHTTRIFAESANDEY 485

Query: 417 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTS 476
           LV+S    ++ L +++ + +EE     F +   T+       + +VQ+ S  +R +  T 
Sbjct: 486 LVISSTLSSQTLVLSIGEVVEEVNDSQFVTNEPTINVQQVGKSSVVQIYSNGIRHIKHTM 545

Query: 477 R-----ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILTEVKHAQLE 529
           R     +   +W  P G S+  A+ N  QV++      + Y EI   D  L E +  +LE
Sbjct: 546 RNDTIEKKYTDWYPPAGISIIQASTNNEQVIIGLSNREICYFEIDPHDDQLVEYQE-RLE 604

Query: 530 YE--------ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGG 578
                     IS   I+ +    SY   A VG  +D +++  SL     L ++T + L  
Sbjct: 605 MSGGSISALAISSSSISKLQRKSSY---AIVG-CSDETIQAISLKPHNCLEIVTLQALSA 660

Query: 579 EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 638
                S+ +      + +   + +G  +   ++  TG+L+D +   LG++P+ L      
Sbjct: 661 N--SSSIAMVPHGYSTSVHIGMENGLYVRVTIDEITGKLSDTRIQFLGSKPVQLSVIGLP 718

Query: 639 NTTH--VFAASDRPTVIYSS 656
                 + A S RP + Y S
Sbjct: 719 QLQQNGLLAISSRPWIGYYS 738


>gi|154285962|ref|XP_001543776.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407417|gb|EDN02958.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1283

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 61/434 (14%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQ----SCAEESEMH-----------------F 745
            R I LGE    + +   S T+ I +  NQ    +  E+ E+H                  
Sbjct: 851  RKIGLGEQVDAVEYSSSSETYVIGT--NQKVDFNLPEDDEIHPEWRNEVISFLPQIDKGS 908

Query: 746  VRLLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTK 800
            V+LL  +T+  I +Y L T E      C  L  S  + +      VGTA +   E+   +
Sbjct: 909  VKLLTPRTWSIIDSYNLRTAERIMCVKCLNLEVSEITHERKDTIVVGTA-LTKGEDIAAR 967

Query: 801  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 847
            G I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +  
Sbjct: 968  GCIYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGSLIAAQGQKCIVRG 1027

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D
Sbjct: 1028 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKD 1085

Query: 908  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
                 + A + L D   +Y L A+++ N+  ++ + E     +  RL     +  G F +
Sbjct: 1086 DGTLQVMAADFLPDGNRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFQTGHFAS 1145

Query: 965  RF----RHGSLVMRLPDSD--------VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
                  R  +   + PD+D         G +  V+  +  G I +I  +    Y  L  L
Sbjct: 1146 TMTLLPRTATSSSQRPDADPDMMDLDSSGPLHHVLVTSETGSIALITPVSETSYRRLSAL 1205

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
            Q+ L   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +  
Sbjct: 1206 QSQLTNTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVKRWLDLGTQRKAEIANRVGA 1263

Query: 1073 SVEELCKRVEELTR 1086
             V E+   +E + +
Sbjct: 1264 DVWEIRADLEAIGK 1277


>gi|291232724|ref|XP_002736306.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
           [Saccoglossus kowalevskii]
          Length = 304

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 43/271 (15%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL--------TPQGLQPMLDVPIYGRI 62
           H PT + H   G+F S +E NLIIA  T + ++ L            L+ +    ++G I
Sbjct: 9   HPPTGIEHCVYGHFFSKEEKNLIIAGATDLHVYRLLSDVDSKQKKSKLEHLRSFSLFGNI 68

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRP--TDNGQI 120
            +L+  R  G ++D L ++ +  K  V+++D  + +L T ++    +   +     N  I
Sbjct: 69  MSLQTTRLAGASRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEEALKEGYVSNYYI 128

Query: 121 G--IIDPDCRLIGLHLYDGLFKVIPFDNKGQLKE---------------AFNIRLEE--- 160
              ++DPD R   + +Y     V+PF  +G  ++               ++ I L++   
Sbjct: 129 PQVVVDPDNRCAVMLMYGSKLVVLPFRREGAAEDQDGVLPGSSKSSFLPSYIINLQDIDQ 188

Query: 161 --LQVLDIKFLYGCAKPTIVVLYQD----------NKDARHVKTYEVALKDKDFVEGPWS 208
             + ++DIKFL+G  +PT+ +L++            KD   +    + ++ +      WS
Sbjct: 189 KLINIIDIKFLHGYYEPTLFILFEPLRTWPGRVAVRKDTCCIVAISLNIEQR-VHPVIWS 247

Query: 209 QNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
            NNL       IPVP P+ GVL+   ++++Y
Sbjct: 248 LNNLPFDCIKAIPVPKPIGGVLVFAVDSLLY 278


>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
 gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
          Length = 1169

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 121/277 (43%), Gaps = 22/277 (7%)

Query: 812  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 871
            +++L+      G V +   + G+LLA++ ++I+LY    +    +     C  HG I   
Sbjct: 906  EIRLLHVTRVGGVVRAFTGYEGRLLASVGKRIRLYALGKKQLLLKAEHRTCSDHGFI--- 962

Query: 872  YVQTRGDFIVVGDLMKSISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 928
            ++   G  I  GD+ + I +L    Y  E    E         W+++   LD    +  +
Sbjct: 963  WLNAVGSRIFAGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTSCAQLDYSTVIAGD 1022

Query: 929  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 988
               ++F  R   E +T     +LE V ++HLG+        +L              V++
Sbjct: 1023 KFDSIFVTRVPQEEST--RHIQLENVCQFHLGDLPTAMDKAALSQ--------STHVVLY 1072

Query: 989  GTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 1047
            GTV G IG +     +  L FL+ L+  +      + G  H  +RS+      V  +  +
Sbjct: 1073 GTVMGSIGALVPFQSKDELDFLQHLEMLMATEAPPLCGREHSFYRSY-----YVPVQQVV 1127

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            DGDL E F  L+  +  ++++ ++ +V  + ++++++
Sbjct: 1128 DGDLCEQFRHLTEAQQRKVAQQLDTTVNNVLRKLDDI 1164



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 8   VTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ---GLQPMLDVPIYGRIAT 64
           +T  +PT +T +  GNF++P+   +++ +   IE  LL+P     L+ +    ++G +  
Sbjct: 7   LTLQRPTGITQAVQGNFSAPKAQEIVVVRSHTIE--LLSPDDSGKLRSLCVSEVFGIVRV 64

Query: 65  LELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGII 123
           +  FR  G  +D+L + ++  +  +L++    S    R   +   + G R    GQ   +
Sbjct: 65  VSTFRLTGTQRDYLVVCSDSGRLVILEY-CNVSATFKRVHCETYGKTGIRRIVPGQYLAV 123

Query: 124 DPDCR--LIGLHLYDGLFKVIPFDNKGQL 150
           DP  R  ++G    +    ++  D+K  L
Sbjct: 124 DPKGRALIVGAVEKEKFVYILNRDSKANL 152


>gi|12805469|gb|AAH02210.1| Ddb1 protein, partial [Mus musculus]
          Length = 86

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 10/86 (11%)

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN- 1071
            Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +  
Sbjct: 1    QNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQY 60

Query: 1072 ---------VSVEELCKRVEELTRLH 1088
                      + ++L K VEELTR+H
Sbjct: 61   DDGSGMKREATADDLIKVVEELTRIH 86


>gi|339253000|ref|XP_003371723.1| cleavage and polyadenylation specificity factor subunit 1
            [Trichinella spiralis]
 gi|316967988|gb|EFV52332.1| cleavage and polyadenylation specificity factor subunit 1
            [Trichinella spiralis]
          Length = 1376

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 29/308 (9%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE + P         +   KL+++  KE KG V SL +  G LL  + QK+  Y W  
Sbjct: 1081 VVPEPDRP---------MTKFKLKVVYSKEQKGPVTSLCSLRGYLLTGMGQKV--YIWQY 1129

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGD---FIVVGDLMKSISLLIYKHEEGAIEERARD 907
            +D+         G     L +YV          +  D    +SLL Y+ E  A+   +RD
Sbjct: 1130 KDNAL------VGISFLDLQVYVHQMASIRYLALTADAFFGVSLLRYQEEYKALSLVSRD 1183

Query: 908  YNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
               + + AVE L D     +L      ++ T     E        RL    +YH G  VN
Sbjct: 1184 PRPDEVLAVEFLVDRTDLSFLMTSAAGDILTYVYLPESLDSFGGQRLVPQADYHFGSQVN 1243

Query: 965  RFR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 1020
             F     H   +      +V Q   +IF + +G +  +  LP  +Y  L  LQ+ L  ++
Sbjct: 1244 AFVRMRCHAQEIAGRKRQEVLQRQGLIFASSDGSVNYLLPLPEREYRLLGMLQSLLIDML 1303

Query: 1021 KGVGGLNHEQWRS--FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 1078
                GLN + +R+  F N       KN +DG++   +L +   + ++I + +  S  ++ 
Sbjct: 1304 PSFAGLNVDDYRTVRFPNSCLREPTKNIIDGNICMLYLYIDALQQEDIVRQIGSSHSQIM 1363

Query: 1079 KRVEELTR 1086
              +  + R
Sbjct: 1364 LELAYMER 1371



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 165/399 (41%), Gaps = 95/399 (23%)

Query: 13  PTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ-----------GLQP--------M 53
           PT V  S  G+FT   +  +++A  + ++I+ L P            GL P        +
Sbjct: 11  PTAVNKSMFGHFTQTDDWEVVVACDSYLKIYKLRPAKLTSDTMECGGGLCPTNLASFELV 70

Query: 54  LDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGR 113
           L   +YGR+A++ + R  G   D + +A +  K  V+ +D E+  L+T +M    D    
Sbjct: 71  LSEQVYGRLASVAIARLTGFQLDVILLAIDDAKLSVVGYDIETHSLVTLSMHYYED---- 126

Query: 114 PTDNGQIGI----------IDPDCRLIGLHLYDGLFKVIPF------------DNKGQLK 151
             D  ++G           +DP+ R   + +Y     V+P             D   +  
Sbjct: 127 --DLFKLGFTRFEIPPMLRMDPERRCAAMTIYGAHLVVLPLVRESLYESMNIVDPSQRPG 184

Query: 152 EAFNIRLEEL------------QVLDIKFLYGCAKPTIVVLYQDNKDAR-----HVKTYE 194
             F++RL                V D+ FL+G  +PT+++LY+  +           TY+
Sbjct: 185 WPFSLRLTSYTVAFNAIDAKMHNVTDMCFLHGFYEPTVLLLYEPTQTTAGRVVVRQDTYQ 244

Query: 195 ---VALKDKDFVEGP-WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC---------- 240
              V+L  KD      W+  NL   A  L+ +P PL GVL+    +I+Y           
Sbjct: 245 ILAVSLNPKDKTHAVIWTLGNLPFDAFALLALPKPLGGVLLFSVNSIIYLNQSVPCCGIL 304

Query: 241 ---SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLL------VITHEKEKVTG 291
              +   F   P+R    ++   V  DGS   L D A    +L      V++   +++  
Sbjct: 305 INDNGRGFTNYPLR---DRSELMVTLDGSHAALIDSANAALVLRSGLVFVVSLLFDRLNM 361

Query: 292 LKIELLGETSI----ASTISY-LDNAVVYIGSSYGDSQL 325
           +K  LL  +S+     ST+S  + +  +++GS+ G+S L
Sbjct: 362 VKEILLTASSVRGAAPSTVSACVSSNCLFVGSAIGNSAL 400


>gi|324499955|gb|ADY39993.1| Cleavage and polyadenylation specificity factor subunit 1 [Ascaris
            suum]
          Length = 1434

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 146/306 (47%), Gaps = 25/306 (8%)

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PE  +PT            +++ + +KE KG V SL + NG LLA + QK+  + W+ RD
Sbjct: 1139 PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLAGMGQKV--FIWLFRD 1187

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA-- 910
            +  + + S    H +I  L V  R +  +  D+ +S++LL Y+ E  A+   +RD  A  
Sbjct: 1188 NNLQGI-SFLDMHFYIHQL-VGVR-NLALACDIYRSVALLRYQEEYKALSLASRDMRAVV 1244

Query: 911  -NWMSAVEILDDD--IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
               M+A  ++D+    ++ ++   N+       E        RL +  E ++G  VN F 
Sbjct: 1245 QPPMAAQFLIDNRQMAFIMSDEAANIAVFNYLPEALESSGGERLILRSEINIGTNVNSFM 1304

Query: 968  H--GSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGV 1023
               G +     +++   +   +V+F +++G  G +  L  + +  L  LQ  +  ++   
Sbjct: 1305 RVKGHISSGFVENEHYSLNRQSVLFCSLDGSFGFVRPLSEKVFRRLHMLQQLMSSLVAQA 1364

Query: 1024 GGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
             GLN +  R+   ++    ++ +N +DGD++  +L LS    +++++ +  S   +   +
Sbjct: 1365 AGLNVKGSRAARPQRPNHYLNTRNMVDGDVVFQYLHLSLADKNDLARKLGTSRYHIIDDL 1424

Query: 1082 EELTRL 1087
             E++RL
Sbjct: 1425 TEISRL 1430



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 118/564 (20%), Positives = 206/564 (36%), Gaps = 107/564 (18%)

Query: 14  TNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLD--------------VPIY 59
           T V  S  G F     + L+      + +H   P  L P  D              V + 
Sbjct: 57  TTVNFSEYGKFLPGNGMQLVTVGAKHLRLHRPNPYALVPETDKQWNQTTRLECIIHVRLL 116

Query: 60  GRIATLELFR-PHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI---GRPT 115
             + +L + R P   +   L +  +  K  V+ + A    L T ++    + +   G  T
Sbjct: 117 APVKSLAVARIPQNPSCSSLLLGFDTAKLSVVGFSAAERSLKTISLHCFEEEMLKDGYVT 176

Query: 116 DNGQIGI-IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFL 169
           D     I +DP  R   + +Y     V+PFD+       + + L  +      ++DI FL
Sbjct: 177 DLPSPVIRVDPAQRCAVMLIYGRYLAVLPFDDTSPHLHTYTVALSSIDPRLVNIIDIAFL 236

Query: 170 YGCAKPTIVVLYQDNKD--ARHVKTYE------VALKDKDFVEGP-WSQNNLDNGADLLI 220
            G  +PT++ LY+  +    R    Y+      V+L  K+ V    W  NNL    + ++
Sbjct: 237 DGYYEPTLLFLYEPAQTTAGRACVRYDTVCMLGVSLNTKEQVHASVWQLNNLPMDCNQVL 296

Query: 221 PVPPPLCGVLIIGEETIVY-------CSA------NAFKAIPIRP------SITKAYGRV 261
            +P P+ G LIIG   ++Y       C +      + F   P++       ++      V
Sbjct: 297 MIPRPIGGALIIGANELIYLNQSVPPCGSLLNSCMDGFTKFPLKSEKEMALTLDGCAACV 356

Query: 262 DADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYG 321
            +     +      L  L ++      V  ++ +   + SI  T++      +++GS  G
Sbjct: 357 ISTNKVVVCARSGALFILTLVVDSTNSVKSIEFKHEFDVSIPHTVTACSPGYLFVGSRVG 416

Query: 322 DSQLIKLNLQ------PDAKGSYVE----------------------------------V 341
           DS  I+   +      P  K   VE                                  V
Sbjct: 417 DSLFIEYVSELVPVDDPIEKKLKVEVPQDDLEDEDLELYGKALPSVISQDVSVEKMRFRV 476

Query: 342 LERYVNLGP---IVDFCVVDLERQGQGQV--------VTCSGAYKDGSLRIVRNGIGINE 390
           L+R +N+ P   +   C   L    Q Q         V   G  KD S+ I +  I  + 
Sbjct: 477 LDRMLNVAPCKKMTSGCSEGLNSYLQEQPRLDPVFDRVCACGHGKDSSICIFQQSIRPDI 536

Query: 391 QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 450
             S  ++G+   W++    D   DT + +    E   LA+  +++L E E   F +   T
Sbjct: 537 ITSSSIEGVIQYWAVGRRED---DTHMYIIASKELGSLALETDNDLVELEAPVFITSEST 593

Query: 451 LFCHDAIYNQL-VQVTSGSVRLVS 473
           +   +     L VQVT+ S+ +V+
Sbjct: 594 IAAGELADGGLSVQVTTSSIVVVA 617


>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
 gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
          Length = 1249

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 150/738 (20%), Positives = 296/738 (40%), Gaps = 104/738 (14%)

Query: 2   SIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDV----P 57
           S++ Y +T  +P+    S  G F+  +++  I    T + I L  P      LD      
Sbjct: 7   SLYLYNITLKRPSYAISSVTGQFSGTKKVQEICI-ATSLTIELWRPNIDTGKLDKICVHN 65

Query: 58  IYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDN 117
           ++  I +LE  R  G  +D+L + ++  K  +LQ+D   + L+T      S    R    
Sbjct: 66  VFSVIQSLEKVRLTGSQKDYLVVTSDSGKLAILQYDTGRNRLVTVFQEPHSKTGFRRNTP 125

Query: 118 GQIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP 175
           G   + DP  R  LIG    + L   +  D+KG ++ +  +   E Q+     L  CA  
Sbjct: 126 GPYLLTDPQNRAILIGALERNKLIYKVHSDDKGGMQISSPL---ESQIRHTITLAMCALD 182

Query: 176 T-----IVVLYQDNKDARHVKTYEV---ALKDKDFVEGPWSQ-----------NNLDNGA 216
           T     + V  +    A   K Y +   A +   F      Q           N L   A
Sbjct: 183 TGYENPVFVAIEAEYGALDSKEYSIDSQAHQTLLFTSYELDQGLNHVVRRVVNNKLPISA 242

Query: 217 DLLIPVPPPLCGVLIIGEETIVYCSAN---AFKAIPIRPS------ITKAYGRVDADGSR 267
             LIP+P P+ GVLI  E   +Y   +    +   PIR        I   + +       
Sbjct: 243 THLIPLPSPVGGVLICCESYAIYERFDYKRLYLPFPIRQGTENTVIINHVFQKFKKSNYL 302

Query: 268 YLLGDHAG--LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS-- 323
            L     G  L   L    E+E++  + +       ++++++ L +  ++  +++G+   
Sbjct: 303 ILAQTQLGDCLKFSLHYNDEREQLDDITVSYFDTIPVSNSLNILRSGFLFANTAHGNKLF 362

Query: 324 -QLIKLNLQPD------------------------AKG----SYVEVLERYVNLGPIVDF 354
            Q  KL  + +                         KG    + V+V++   +L P+ D 
Sbjct: 363 YQFEKLGEEDNDLTLRCSDHYEQMTTIDHSKREFKPKGLENLALVDVMD---SLNPVTDA 419

Query: 355 CVVDLERQGQG-----QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGM-WSLRSS 408
            +++  R  +       +VT S  +    ++I+ +G+ +N+  +  L     + ++ +  
Sbjct: 420 TLLE-TRMSESPDPLINLVTLSSRF----IKILTHGMPVNQLVTSPLPIHPSLIFTTKKF 474

Query: 409 TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSG- 467
            +   D +LV+S    ++ L +++ + +EE     F +   T+       + +VQV S  
Sbjct: 475 NESVNDDYLVISSELSSQTLVLSIGEVVEEVSDSEFVTNQPTIHVQQTGKSSIVQVFSNG 534

Query: 468 --SVRLVSSTSRELRN--EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEV 523
             S+R + +   E++   +W  P G SV  A+ N +Q+++      + Y EI D    ++
Sbjct: 535 IRSIRHIKNGDEEIKKTTDWYPPAGISVIKASGNNTQLIIGMSNREVCYFEI-DSADDQL 593

Query: 524 KHAQLEYEIS----CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHL 576
              Q   E+S            ++P      A+   +D ++++ SL     L+++  + L
Sbjct: 594 IEYQERLEVSGGSISSLAILSSKDPEKRSSHAIIGSSDETIQVVSLKRHNCLSIVALQAL 653

Query: 577 GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF- 635
             +    S+L+       Y+   + +G  +  +++  +G+L+D +   LG++ + L    
Sbjct: 654 SSK--STSILMINHNDSVYVHIGMENGLYVRTMIDEVSGKLSDTRIKFLGSKSVRLSPIK 711

Query: 636 ---SSKNTTHVFAASDRP 650
              +S     + A S RP
Sbjct: 712 VPGNSGEENGILALSSRP 729



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 145/352 (41%), Gaps = 63/352 (17%)

Query: 777  SDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-----------LQLIAEKETKGAV 825
            S DS+ Y  VGT     ++N   K  +  F V   +           L  I + E++ A 
Sbjct: 911  SSDSSSYLIVGTTRNSFDKN--AKHYLYTFKVAGSRNSSHSQKGQKTLLFIHKTESEFAP 968

Query: 826  YSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 881
             ++  FN +LL      ++LY    K +LR     +  S   +  +I+ L     G+ I+
Sbjct: 969  LAMIEFNNRLLIGTKNLLRLYDIGHKQLLR-----KASSSIDYFENIIKL-AYMGGNRIM 1022

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---- 937
              D   S + + Y   E      A D     ++++  LD D  +G +   N+F  R    
Sbjct: 1023 AADASMSSTFVKYDQVENQFFPLADDVMKRKITSMCPLDYDTIVGGDKFGNVFVSRIPEF 1082

Query: 938  ------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
                        ++ +   +    RL+ + E++ G+    F  GSL++    S+     T
Sbjct: 1083 LSKQVDQDWGLIRHQDSYLNGAASRLKNLCEFYSGDIPTSFSKGSLIL---GSEESIFYT 1139

Query: 986  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI-------------KGVGGLNHEQWR 1032
             + GTV  +I ++    +E   F+E L+  LR                  + G +H + R
Sbjct: 1140 GLMGTVGALIPLVTK--NEVQFFIE-LEAELRSYFDYNFDNFDEQKNGHNLLGKDHLKHR 1196

Query: 1033 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            S+ N       KN +DGDLIE F ++S      I+  ++ + +++ K++ E+
Sbjct: 1197 SYYNP-----VKNVIDGDLIERFSEVSYNNKIRIANKLDRTPKDIDKKISEI 1243


>gi|24415580|gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
            subunit [Arabidopsis thaliana]
          Length = 1442

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 24/302 (7%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 809
            +E  +  P+ T E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1097 WETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1155

Query: 810  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1156 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1211

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD-- 921
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1212 DAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLDCFATEFLIDGS 1271

Query: 922  DIYLGAENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             + L   +      V   +    +  +G +L    E+H+G  V++F    L +++  S  
Sbjct: 1272 TLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFHVGAHVSKF----LRLQMVSSGA 1327

Query: 981  GQIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 1038
             +I    ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F +  
Sbjct: 1328 DKINRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPLAFRQFRSSG 1387

Query: 1039 KT 1040
            K 
Sbjct: 1388 KA 1389



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 160/403 (39%), Gaps = 108/403 (26%)

Query: 155 NIR-LEELQVLDIKFLYGCAKPTIVVLYQDNK------DARHVKTYEVALK-DKDFVEGP 206
           N+R LE   V D  FL+G  +P IV+L ++          +H      AL  +    + P
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQHP 299

Query: 207 --WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDAD 264
             WS  NL + A  L+ VP P+ GVL++   TI Y S +A  A+ +    + A    +  
Sbjct: 300 VIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELP 359

Query: 265 GSRY-----------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTIS 307
            S +                 LL   +G L LL + ++   V  L +     + +AS I+
Sbjct: 360 ASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDIT 419

Query: 308 YLDNAVVYIGSSYGDSQLIKLNLQ------------------------------------ 331
            + N++ ++GS  GDS L++ + +                                    
Sbjct: 420 SVGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRLRMTSDTFQD 479

Query: 332 -------------PD----AKGSY-VEVLERYVNLGPIVDFC----------VVDLERQG 363
                        PD    A+ S+   V +  VN+GP+ DF              + +Q 
Sbjct: 480 TIGNEELSLFGSTPDNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQS 539

Query: 364 QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL--------------RSST 409
             ++V CSG  K+G+L ++R  I       VEL G KG+W++               ++ 
Sbjct: 540 NYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSKMAAD 599

Query: 410 DDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
           +D +  +L++S   E R + +   D L E TE   +  Q +T+
Sbjct: 600 EDEYHAYLIISL--EARTMVLETADLLTEVTESVDYYVQGRTI 640


>gi|10257491|dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit [Arabidopsis
            thaliana]
          Length = 1448

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 24/302 (7%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 809
            +E  +  P+ T E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1103 WETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1161

Query: 810  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1162 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1217

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD-- 921
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1218 DAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLDCFATEFLIDGS 1277

Query: 922  DIYLGAENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             + L   +      V   +    +  +G +L    E+H+G  V++F    L +++  S  
Sbjct: 1278 TLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFHVGAHVSKF----LRLQMVSSGA 1333

Query: 981  GQIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 1038
             +I    ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F +  
Sbjct: 1334 DKINRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPLAFRQFRSSG 1393

Query: 1039 KT 1040
            K 
Sbjct: 1394 KA 1395



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 27/210 (12%)

Query: 155 NIR-LEELQVLDIKFLYGCAKPTIVVLYQDNK------DARHVKTYEVALK-DKDFVEGP 206
           N+R LE   V D  FL+G  +P IV+L ++          +H      AL  +    + P
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQHP 299

Query: 207 --WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDAD 264
             WS  NL + A  L+ VP P+ GVL++   TI Y S +A  A+ +    + A    +  
Sbjct: 300 VIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELP 359

Query: 265 GSRY-----------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTIS 307
            S +                 LL   +G L LL + ++   V  L +     + +AS I+
Sbjct: 360 ASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDIT 419

Query: 308 YLDNAVVYIGSSYGDSQLIKLNLQPDAKGS 337
            + N++ ++GS  GDS L++ + +     S
Sbjct: 420 SVGNSLFFLGSRLGDSLLVQFSCRSGPAAS 449



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 27/136 (19%)

Query: 341 VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
           V +  VN+GP+ DF              + +Q   ++V CSG  K+G+L ++R  I    
Sbjct: 513 VRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEM 572

Query: 391 QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRILAMNLEDEL 436
              VEL G KG+W++               ++ +D +  +L++S   E R + +   D L
Sbjct: 573 ITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISL--EARTMVLETADLL 630

Query: 437 EE-TEIEGFCSQTQTL 451
            E TE   +  Q +T+
Sbjct: 631 TEVTESVDYYVQGRTI 646


>gi|30696088|ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
 gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=AtCPSF160; Short=CPSF 160
            kDa subunit
 gi|332008729|gb|AED96112.1| cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
          Length = 1442

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 24/302 (7%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 809
            +E  +  P+ T E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1097 WETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1155

Query: 810  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1156 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1211

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD-- 921
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1212 DAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLDCFATEFLIDGS 1271

Query: 922  DIYLGAENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
             + L   +      V   +    +  +G +L    E+H+G  V++F    L +++  S  
Sbjct: 1272 TLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFHVGAHVSKF----LRLQMVSSGA 1327

Query: 981  GQIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 1038
             +I    ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F +  
Sbjct: 1328 DKINRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPLAFRQFRSSG 1387

Query: 1039 KT 1040
            K 
Sbjct: 1388 KA 1389



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 159/403 (39%), Gaps = 108/403 (26%)

Query: 155 NIR-LEELQVLDIKFLYGCAKPTIVVLYQDNK------DARHVKTYEVALK-DKDFVEGP 206
           N+R LE   V D  FL+G  +P IV+L ++          +H      AL  +    + P
Sbjct: 240 NLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHTCVLSALSINSTLKQHP 299

Query: 207 --WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDAD 264
             WS  NL + A  L+ VP P+ GVL++   TI Y S +A  A+ +    + A    +  
Sbjct: 300 VIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSASCALALNNYASSADSSQELP 359

Query: 265 GSRY-----------------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTIS 307
            S +                 LL   +G L LL + ++   V  L +     + +AS I+
Sbjct: 360 ASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLASDIT 419

Query: 308 YLDNAVVYIGSSYGDSQLI------------------------------KLNLQPD---- 333
            + N++ ++GS  GDS L+                              +L +  D    
Sbjct: 420 SVGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDEDEDIEGEGHQAKRLRMTSDTFQD 479

Query: 334 -------------------AKGSY-VEVLERYVNLGPIVDFC----------VVDLERQG 363
                              A+ S+   V +  VN+GP+ DF              + +Q 
Sbjct: 480 TIGNEELSLFGSTPNNSDSAQKSFSFAVRDSLVNVGPVKDFAYGLRINADANATGVSKQS 539

Query: 364 QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL--------------RSST 409
             ++V CSG  K+G+L ++R  I       VEL G KG+W++               ++ 
Sbjct: 540 NYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSKMAAD 599

Query: 410 DDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
           +D +  +L++S   E R + +   D L E TE   +  Q +T+
Sbjct: 600 EDEYHAYLIISL--EARTMVLETADLLTEVTESVDYYVQGRTI 640


>gi|301628217|ref|XP_002943254.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Xenopus (Silurana) tropicalis]
          Length = 628

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 121/623 (19%), Positives = 241/623 (38%), Gaps = 166/623 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF S  E NL++A  +++ ++ L P                  + L+
Sbjct: 8   AHPPTGLEFSMYCNFFSNSERNLVVAGTSQLYVYRLNPNCESSSKGEKGSEVKGHKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            M     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LMASFSFFGNVMSMASVQLAGAKRDALLLSFKEAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF---------------DNKGQLK 151
           + D   +   N ++  +DP  R   + +Y     V+PF                 K    
Sbjct: 128 LRDGFVQNVHNPKVR-VDPSGRCAVMLIYGTQLVVLPFRRDTLAEEHDGLVGEGQKSSFL 186

Query: 152 EAFNIRLEE-----LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
            ++ I + E     L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRELDEKLLNIIDMQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEG--P--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
            ++   P  WS  NL       + VP P+ GV+I    +++Y +              N 
Sbjct: 247 IMQKVHPVIWSLTNLPYDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVSLNSLTNG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             + P++P   +   RV  D S        + ++    G +++L +IT     V     +
Sbjct: 307 TTSFPLKP---QEGLRVTLDCSQATFISYDKMVISLKGGEIYVLTLITDGMRSVRSFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQ-----------PD----------- 333
               + + ++++ ++   +++GS  G+S L++   +           PD           
Sbjct: 364 KAAASVLTTSMTPMEPGYLFLGSRLGNSLLLRYTEKVQDSPAGPSKDPDKQDEPPNKKKR 423

Query: 334 ----------AKGSYV------------------------EVLERYVNLGPIVD------ 353
                     +KG+ V                        EV +  +N+GP         
Sbjct: 424 VDSSLARPGGSKGNMVDEIDEIEVYGSEMQSGTQLSTYSFEVCDSILNIGPCATASMGEP 483

Query: 354 -FCVVDLERQGQG--QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSS-- 408
            F   + +   +   ++V CSG  K+G+L +++  I      + EL G   MW++ S+  
Sbjct: 484 AFLSEEFQESPEPDLEIVLCSGYGKNGALSVLQKSIRPQVVTTFELPGCHDMWTVISNHK 543

Query: 409 ------------------TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 450
                              D     FL++S    T IL      E+ E +  GF +Q  T
Sbjct: 544 KEEQEGEKEGETPPVEAEEDTNRHGFLILSRDDSTMILQTG--QEIMELDTSGFATQDPT 601

Query: 451 LFCHDAIYNQ-LVQVTSGSVRLV 472
           ++  +   N+ +VQV+   +RL+
Sbjct: 602 VYAGNIGDNKYIVQVSPRGIRLL 624


>gi|320165260|gb|EFW42159.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 2631

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 32/205 (15%)

Query: 544  PSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDG 603
            P  + + A+ +W  + V +F LP + L+ +    G+++ RS+ L A EG   L   L DG
Sbjct: 1661 PKATTLVAISLWKTMDVLVFQLPGMELVAQHRFAGDVVVRSLALHAIEGRIKLFVGLADG 1720

Query: 604  HLLNFLLNMKTG--------ELTDRKKVSLGTQPITLRTF---------------SSKNT 640
            HL+ F L  ++         E  +R+ V +G+ P+TL  F               + +  
Sbjct: 1721 HLVQFTLVPRSVVAGTKCELEFAERRAVLVGSSPLTLEVFPLAGPADNDHGESVEAGRPP 1780

Query: 641  THVFAASDRPTVIYS----SNKKLLYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTI 695
              +    D+P ++      S  ++L  N+ L E S  C F+SA F  S L +A +G +++
Sbjct: 1781 VGLLVCCDKPALVLPGKTDSQTQVLPLNIALAEKS--CCFSSALFRQSTLLLAAQGRISV 1838

Query: 696  GTID--DIQKLHIRSIPLGEHPRRI 718
             T    D ++LH   + LG  P  I
Sbjct: 1839 ATFAQLDGKQLHAEKLLLGATPLAI 1863


>gi|290981010|ref|XP_002673224.1| CPSF A subunit [Naegleria gruberi]
 gi|284086806|gb|EFC40480.1| CPSF A subunit [Naegleria gruberi]
          Length = 1373

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 142/717 (19%), Positives = 260/717 (36%), Gaps = 166/717 (23%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLD--VPIYGRIATLELF 68
           H PT V+      FTS  + NLII K   +E++L+ P     +L     ++G I ++   
Sbjct: 9   HPPTAVSFCLKARFTSANDENLIIVKNNIMEVYLIKPNTSNIVLVKVFELFGVIDSIIAV 68

Query: 69  RPHGEAQDFLFIATE-RYKFCVLQWDAESSELITRAMGDVSDRIGRPTD----NGQIGII 123
              G  ++ L I  E   K  V+++D + S+L T ++  + D   R       + Q  I+
Sbjct: 69  CLQGMKKEMLLINFEDEAKVSVVEFDEKRSDLKTLSLHYLEDDFLREGKARFFHNQPIIL 128

Query: 124 DPDCRLIGLHLYDGLFKVIPFDNKGQ---------------------------------- 149
           DP  R   + + D    ++PF   G+                                  
Sbjct: 129 DPQNRFATVIICDSKLVILPFRQSGEDVSLSTEDNFLFALSGDQEEANENVGDQKKHHQP 188

Query: 150 -LKEAFNIRLEELQVLDIK---FLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDK 200
            ++    I L +L + ++K   FL G  +PTI+ L+++ +      A    T  V     
Sbjct: 189 EVQRQVIIDLNDLGIKNVKDYCFLNGYNEPTILFLHENEQTWSGRLAAKSNTSTVTAVSF 248

Query: 201 D----FVEGPWSQNNLDNGADLLIPVPPPLCG-VLIIGEETIVYCSANAFKAIPIR---- 251
           D    +    WS  +L +  + LIP+   + G  L+IG  +I++ +  A   +       
Sbjct: 249 DLFRKYYPKIWSVGSLPHDCNKLIPLQEDVAGGALVIGMNSIIHINQCATYGLSFNDFAV 308

Query: 252 --PSITKAYGRVDADG-------------SRYLLGDHAGLLHLLVITHEKEKVTGLKIEL 296
             P+++  +   D                 + L+    G L+ + +     ++  + I+ 
Sbjct: 309 SNPNLSINFNTFDGPALFFDTVAYTFIARDKLLVSLKDGELYTMYLESGGSRINNINIKK 368

Query: 297 LGETSIASTISYLDNAVVYIGSSYGDSQLIKL-------------------------NLQ 331
              T+ AS +  L   ++++GS  GDS L +                          N +
Sbjct: 369 TSNTTPASCMCTLKGNLIFLGSKIGDSVLYEYQEKVEVETSSLDTDEEMSSVFAAGENFE 428

Query: 332 PDAKG-------SYVEVLER----------------------------YVNLGPIVDFCV 356
           P+ K         +   LE+                            + N+GPI     
Sbjct: 429 PEKKKRKLADDDDFFAALEKDEEPTVIESFSKVSKKETTKVELKIKHVFTNIGPISHLTA 488

Query: 357 V-----DLE------RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWS 404
                 D+          Q   + CSG  + G L ++   +  + Q+   L   +K +W+
Sbjct: 489 AVTSSFDMSGFKSKTNDNQLSAIACSGIGRHGCLTVLNRSLQPDIQSEATLPFLVKQVWT 548

Query: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 464
           +   T+   D +L++S   +T++     +  L E   +      +T      I   +VQV
Sbjct: 549 ISQKTEH--DLYLILSLEDKTKVFES--KATLAEVTSKSMFVTNETTLNIGKIRESIVQV 604

Query: 465 TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILT--- 521
           T  SV L+ S  +++ +  K      +  +      VLL    G LV L   +G +T   
Sbjct: 605 TRKSVMLIGSEPKQVHHSKKE-----IRSSIILDPYVLLHFYDGSLVLLTHDNGRVTSKQ 659

Query: 522 ---EVKHAQLEYEISCLDINP----IGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 571
              E  H ++   +     NP     G N    +      WTD +  I S+PD+  +
Sbjct: 660 LDIESNHGKIT-AVCLYKTNPEFEFFGINEKEGKYLCCVYWTDGAFEILSVPDMTCV 715



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 97/473 (20%), Positives = 199/473 (42%), Gaps = 83/473 (17%)

Query: 689  KEGELTIGTIDDIQKLHI----RSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEES-- 741
            K+ +L I +++   K +     R I L   P  I  HQ+ +   A  S+  ++   +S  
Sbjct: 904  KQSKLHISSLNANVKFNAYWPQRKILLKSTPNVITFHQDTNTCLAFTSVPVKAILPDSIP 963

Query: 742  -----------EMHFVRLLDDQTFEFISTYPLDTFEYGCS-----ILSCSFSDDSNVYY- 784
                       + H V+L     ++ +  +  D  E   +     +    ++DD+++ + 
Sbjct: 964  FPEGKCPPPAEQKHTVKLFSGHNWQEMDKFEFDLHESAVAAKVVYLSKEEYNDDTDISFE 1023

Query: 785  --------------CVGTAYVLPEENEPTKGRILVFIVE-------DGKLQLIAEKETKG 823
                           VGTAYV   E E  +GR+L+F ++       + KL LI+    KG
Sbjct: 1024 EPLNSRKQDLVSVVAVGTAYV-QSERELCRGRLLLFDLDPILGRENEYKLNLISSTSVKG 1082

Query: 824  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 883
             + +L   +  ++ ++  +I  Y +   D   + +     +        + T  +FI+ G
Sbjct: 1083 PITTLEQVDRYIICSVGNRIYTYYF---DWEEKRMHITSFYDTQFYTASLNTVRNFIMFG 1139

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRK 938
            D+ KS+S L +K +   +   A+D     + + E L ++  LG        N  +F+   
Sbjct: 1140 DIYKSVSFLRWKEKGHRLILLAKDNRPLQVVSSEFLVNNDLLGLAVIDTSKNLQIFSYLP 1199

Query: 939  NSEGATDEERGR-LEVVGEYHLGEFVNRFRHGSLVMRLPDSD------VGQIPT------ 985
              + + D   GR L  V ++H+G  +N       V  LPD +      V + P       
Sbjct: 1200 QHQESND---GRNLVPVCDFHIGTLINSLIRMK-VRELPDDNTIRLGNVNEKPKQSGKKD 1255

Query: 986  ----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
                      ++FG+V+G IG +A +    +  L  LQ  +   ++   GL+ + +R + 
Sbjct: 1256 ITKTNPNHQFILFGSVDGAIGYVAPINEVTHRRLFALQLKMYTQLEQAAGLHPKSFRLYK 1315

Query: 1036 NEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
              ++T     KN +DG LI ++ +++     ++++ +  + + + + ++EL +
Sbjct: 1316 PLERTEYNYKKNIIDGQLIWNYANINTILQRDLARQIGTNSDNILRSIQELNQ 1368


>gi|261201748|ref|XP_002628088.1| protein CFT1 [Ajellomyces dermatitidis SLH14081]
 gi|239590185|gb|EEQ72766.1| protein CFT1 [Ajellomyces dermatitidis SLH14081]
          Length = 1403

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 183/435 (42%), Gaps = 63/435 (14%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-----------------FVR 747
            R I LGE    + +   S T+ I + +  + +  E+ E+H                  V+
Sbjct: 971  RKIGLGEQVDIVEYSSSSETYVIGTSQKVDFNLPEDDEIHPEWRNEVISFLPQIDQGSVK 1030

Query: 748  LLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGR 802
            LL  +T+  I ++ L T E      C  L  S  + +      VGTA V   E+   +G 
Sbjct: 1031 LLSPRTWSIIDSHTLRTAERIMCVKCLDLEVSEITHERRDMIAVGTA-VTRGEDIAARGC 1089

Query: 803  ILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWM 849
            I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +    
Sbjct: 1090 IYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG-- 1147

Query: 850  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            L++DG+    +      ++  L         ++GD +K I    Y  E   +   ++D  
Sbjct: 1148 LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGIWFAGYSEEPYKLSLFSKDDG 1207

Query: 910  ANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
               + A + L D   +Y L A+++ N+  ++ + E     +  RL     +H G F +  
Sbjct: 1208 TLQVMAADFLPDGKRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFHTGHFASTM 1267

Query: 967  RHGSLVMRL-------PDSD--------VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEK 1011
               +L+ R        PD++         G +  V+  +  G I +I  L    Y  L  
Sbjct: 1268 ---TLLPRTIIPSAQGPDANPDMMELDSSGPLYHVLVTSETGSIALITPLSETAYRRLSA 1324

Query: 1012 LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
            LQ+ L   ++   GLN   +R+   E   +  +  +DGDL+  +LDL   R  EI+  + 
Sbjct: 1325 LQSQLINTLEHPCGLNPRAFRAI--ESDGIGGRGMVDGDLLHRWLDLGTQRKAEIAHRVG 1382

Query: 1072 VSVEELCKRVEELTR 1086
              + E+   +E + +
Sbjct: 1383 ADIWEIRADLEAIGK 1397


>gi|238508528|ref|XP_002385456.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus flavus NRRL3357]
 gi|220688975|gb|EED45327.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus flavus NRRL3357]
          Length = 1204

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 64/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 746
            I+ IP+GE    + +   S  + I +         E+ E+H                  +
Sbjct: 772  IQQIPIGEQVDHLAYSSSSGMYVIGTSHRTEFKLPEDDELHPEWRNEMTSFFPEVQRSSL 831

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 801
            +++  +T+  I +Y L   E+  ++ + S     N +       VGTA+   E+   ++G
Sbjct: 832  KVVSPKTWTVIDSYLLSPAEHVMAVKNMSLEISENTHERKDMIVVGTAFARGEDIA-SRG 890

Query: 802  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
             + VF V            D KL+L+ ++  KGAV +L+   G+    + Q  +     L
Sbjct: 891  CVYVFEVIKVVPDPKRPEMDRKLRLVGKEPVKGAVTALSEIGGQGFLIVAQGQKCIVRGL 950

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            ++DG+    +      H+  +         ++ D +K +    Y  E   +   A+D + 
Sbjct: 951  KEDGSLLPVAFMDVQCHVSVVKELKGTGMCIIADAVKGLWFAGYSEEPYKMSLFAKDLDY 1010

Query: 911  NWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              + A + L D      L A+++ NL  ++ + E        RL    ++H G F+    
Sbjct: 1011 LEVLAADFLPDGNKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFHTGNFI---- 1066

Query: 968  HGSLVMRLPDSDVG---------------QIP--TVIFGTVNGVIGVIASLPHEQYLFLE 1010
              S +  LP + V                +IP   ++  + NG +G++  +  E Y  L 
Sbjct: 1067 --STLTLLPRTSVSSEQMISDVDAMDVDIKIPRHQMLITSQNGSVGLVTCVSEESYRRLS 1124

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             LQ+ L   I+   GLN   +R+   E      +  LDG L+  +LD+S+ R  EI+  +
Sbjct: 1125 ALQSQLTNTIEHPCGLNPRAFRAV--ESDGTAGRGMLDGKLLFQWLDMSKQRKVEIASRV 1182

Query: 1071 NVSVEELCKRVEELT 1085
              +  E+    E ++
Sbjct: 1183 GANEWEIKADFEAIS 1197


>gi|198415711|ref|XP_002123169.1| PREDICTED: similar to cleavage and polyadenylation specificity
           factor 1, partial [Ciona intestinalis]
          Length = 1370

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 125/657 (19%), Positives = 247/657 (37%), Gaps = 153/657 (23%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL------------------TPQGLQP 52
           H PT V      NF S +E NL++   +++ ++ L                    + LQ 
Sbjct: 9   HAPTGVEQCVYCNFASEKEKNLLVTAASQLTVYRLERNYEVTTKTENGEENTVVKEKLQQ 68

Query: 53  MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG 112
           +    ++G +  +   R  G   D + ++    K  ++++D  + ++ T ++    D + 
Sbjct: 69  IGSWQLFGNVVRMRSVRLAGAKLDSVLLSFAEAKLSIIEFDQATHDIKTTSLHYFEDALY 128

Query: 113 RPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFD-NKGQLK---------------- 151
           +     +I +    +DP+ R + L L      V+P   N   L                 
Sbjct: 129 KDGSYQRITLPKIAVDPESRCVALQLTTKSVAVVPLRANTAALATDDGAAPQDNVSLQNK 188

Query: 152 ----------EAFNIRLEELQVLDIKFLYGCAKPTIVVLYQD-----NKDARHVKTYEVA 196
                      A + RL+  +++DI+FL+G  +PT++VL++       + A    T  + 
Sbjct: 189 RSTTSYTIDLHAVDARLQ--RIIDIQFLHGYNEPTLLVLFESLRTWAGRVAMRQDTCNIV 246

Query: 197 LKDKDFVEG----PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANA-------- 244
               +  E      WS N L        PVP P+ GVLI    +I+Y + +         
Sbjct: 247 AISLNMAEQLHPVVWSLNGLPFDCKYAYPVPKPIGGVLIFAVNSILYLNQSVPPYGTSLN 306

Query: 245 -----FKAIPIRP------SITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLK 293
                  + P++P      ++  ++    +  S  +   +  L  L ++      V    
Sbjct: 307 STTENSTSFPLKPQEDVCMTLDCSHAMFISPESLVISLKNGELYVLTLLVDSMRSVRNFH 366

Query: 294 IELLGETSIASTISYLDNAVVYIGSSYGDSQLIK-----------------------LNL 330
            +    + + S ++ LD+  +++GS  G+S L+K                       LN 
Sbjct: 367 FDKSASSVLTSCLTVLDDGFLFLGSRLGNSLLLKYTEARPVFRNCYHTEEPAAKRKRLNT 426

Query: 331 QPDAKGS-----------------------YVEVLERYVNLGPI-------VDFCVVDL- 359
             D   S                         EV +  VN+GP          F   +  
Sbjct: 427 AADWAASDTNDIDLQMYGKDTVTSEPLSSYKFEVCDSLVNIGPCGAAELGEPAFLSEEFV 486

Query: 360 -ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS---STDDPFDT 415
            +R+   ++   SG  K+G++ +++  +      + EL G   MW+++S    T+ P  T
Sbjct: 487 SQRESDLELAILSGHGKNGAISVLQRSVKPQVVTTFELPGCIDMWTVKSVCEKTELPTKT 546

Query: 416 ------FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ--LVQVTSG 467
                 +L++S   E   L +    E+ E E  GF ++ Q++F  +   ++  ++QV + 
Sbjct: 547 QQQQHSYLILS--REESTLILETGKEIMEVENSGFNTREQSVFVGNIGGDKELILQVCAS 604

Query: 468 SVRLVSSTS--RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTE 522
            V L++     + +  E  SP    +   +      LL T  G L+ L + + + +E
Sbjct: 605 GVWLLAGVKLLQHIPLELGSP----ITQCSICDPYALLLTSDGDLIMLTLTNDLDSE 657



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 103/459 (22%), Positives = 191/459 (41%), Gaps = 63/459 (13%)

Query: 632  LRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAI 687
            LRTFS+    + VF     P  I+ + +  L  +    + S  C  PF++   P+  L  
Sbjct: 917  LRTFSNIGGYSGVFLCGPYPYWIFVTIRGALCCHPMSVDGSVSCFVPFHNVNCPNGFLYF 976

Query: 688  AKEGELTIGTIDDIQKLH----IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE---- 739
              +GEL I  +    K      +R I L      + +  + + +A+ +  ++ C      
Sbjct: 977  NSQGELRICMLPPHMKYDTAWPMRKITLRCSVHFLAYSIEHKVYALVTSVSEPCTRLPYL 1036

Query: 740  --ESEMHF------------------VRLLDDQTFEFISTYPLDT--FEYGCSI----LS 773
              E+E  F                  V+L+   +++ +    LD   FE+   +    LS
Sbjct: 1037 TFENEREFEDLEKGDRFIYPHIDKFSVQLISPASWDLVPNARLDMGEFEHITCMKNVWLS 1096

Query: 774  CSFSDDSNVYYCV-GTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKET 821
            C     +   + V GT  V  EE   ++G+I++      + E G      KL+ I  +E 
Sbjct: 1097 CGQDSSARQNFLVLGTVNVFGEEMS-SRGKIIILEVIEVVPEPGQPLTKNKLKQIYSEEQ 1155

Query: 822  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 881
            KG V ++    G LL AI QKI ++++    D  + L+       ++   +  +   F +
Sbjct: 1156 KGPVTAVCGLEGNLLTAIGQKIFIWRF----DENQSLRGLAFVDTNVYIHHALSFRSFAL 1211

Query: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRK 938
            VGD+ +SI+LL Y+ +   +   +RD     +   +++ D     +L +++  NL     
Sbjct: 1212 VGDIQRSITLLRYQTDFKTLSVTSRDVRPLEVYTADLVVDGTGINFLVSDHEKNLVLFAY 1271

Query: 939  NSEGATDEERGRLEVVGEYHLGEFVN-RFRHGSL-VMR---LPDSDVGQIPTVIFGTVNG 993
            + E        RL    + H+G   N  +R  +  V R   LP+     +   + GT++G
Sbjct: 1272 DPEDHESHGGSRLTKRADMHIGSRANCMWRVAACGVDRSTGLPNQPYAGVHITMMGTLDG 1331

Query: 994  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 1032
             I  +  +  + Y  L  LQ  +   ++ + GLN + +R
Sbjct: 1332 SICHVLPVAEKVYRRLLMLQNIMITGLQHIAGLNPKAFR 1370


>gi|239611898|gb|EEQ88885.1| protein CFT1 [Ajellomyces dermatitidis ER-3]
 gi|327352847|gb|EGE81704.1| CFT1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1402

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 183/435 (42%), Gaps = 63/435 (14%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-----------------FVR 747
            R I LGE    + +   S T+ I + +  + +  E+ E+H                  V+
Sbjct: 970  RKIGLGEQVDIVEYSSSSETYVIGTSQKVDFNLPEDDEIHPEWRNEVISFLPQIDQGSVK 1029

Query: 748  LLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGR 802
            LL  +T+  I ++ L T E      C  L  S  + +      VGTA V   E+   +G 
Sbjct: 1030 LLSPRTWSIIDSHTLRTAERIMCVKCLDLEVSEITHERRDMIAVGTA-VTRGEDIAARGC 1088

Query: 803  ILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWM 849
            I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +    
Sbjct: 1089 IYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG-- 1146

Query: 850  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            L++DG+    +      ++  L         ++GD +K I    Y  E   +   ++D  
Sbjct: 1147 LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGIWFAGYSEEPYKLSLFSKDDG 1206

Query: 910  ANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
               + A + L D   +Y L A+++ N+  ++ + E     +  RL     +H G F +  
Sbjct: 1207 TLQVMAADFLPDGKRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFHTGHFASTM 1266

Query: 967  RHGSLVMRL-------PDSD--------VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEK 1011
               +L+ R        PD++         G +  V+  +  G I +I  L    Y  L  
Sbjct: 1267 ---TLLPRTIIPSAQGPDANPDMMELDSSGPLYHVLVTSETGSIALITPLSETAYRRLSA 1323

Query: 1012 LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 1071
            LQ+ L   ++   GLN   +R+   E   +  +  +DGDL+  +LDL   R  EI+  + 
Sbjct: 1324 LQSQLINTLEHPCGLNPRAFRAI--ESDGIGGRGMVDGDLLHRWLDLGTQRKAEIAHRVG 1381

Query: 1072 VSVEELCKRVEELTR 1086
              + E+   +E + +
Sbjct: 1382 ADIWEIRADLEAIGK 1396


>gi|124505011|ref|XP_001351247.1| CPSF (cleavage and polyadenylation specific factor), subunit A,
            putative [Plasmodium falciparum 3D7]
 gi|7768292|emb|CAB11136.2| CPSF (cleavage and polyadenylation specific factor), subunit A,
            putative [Plasmodium falciparum 3D7]
          Length = 2870

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 108/505 (21%), Positives = 209/505 (41%), Gaps = 79/505 (15%)

Query: 617  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS-NKKLLYSNVNLKEVSHMCP 675
             +++KK+ +    I       K    +F   + P +IYS   KK+  S ++LK +  +  
Sbjct: 2344 FSEKKKIDINQSNII------KKYNFLFVCCESPIIIYSDLKKKINVSKLSLKNIYIVDI 2397

Query: 676  FNS----AAFPDSLAIAKEGE------------LTIGTIDDIQKLHIRSIPLGEHPRRIC 719
            FN       F + L+  K+ +            + I  ++ I+K  ++ IP      +I 
Sbjct: 2398 FNDFNYLNPFHNFLSFKKKNQNNFYFIFYDGSNIHISPLNQIKKTFLKKIPFHRTVEKIA 2457

Query: 720  -HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCS-------- 770
             H +     A C  + +    E     +   D        TY + + +Y  S        
Sbjct: 2458 YHSDTGLLIAACPSEEKHKTNEMMKQIICFFDPYHDSIKYTYIIPS-KYTVSTIIIYDNE 2516

Query: 771  -ILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKE------TKG 823
             ++  +F   S ++  VGT     +  EPT G I +FI +  K  +   K         G
Sbjct: 2517 KLMKSNFDVTSFIF--VGTCNSNEKYTEPTSGHIHIFIAK-KKANIFEIKHIYTHNINYG 2573

Query: 824  AVYSLNAFNGKLLAAINQKIQL---------YKWMLRDDGTRELQSECGHHGHILALY-- 872
             V +L  ++ K++A IN  + +         Y+  +     + LQ +   +  I+ L   
Sbjct: 2574 GVTNLVPYDDKIVATINNMVVILDINNLIIKYEAFM---DPQNLQPKIEGNNAIVELVSF 2630

Query: 873  --------VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 924
                    V   GD+IVVGD+M S+++L Y +E   + E  RDY+  W +++  L     
Sbjct: 2631 TPSSWIMTVDVYGDYIVVGDIMTSVTILQYDYENSQLFEVCRDYSNIWCTSLCALSKSHI 2690

Query: 925  LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR---FRHGSLVMRLPDSDVG 981
            + ++ + N   ++K+     DE+  +L  V  ++ G  +N+     + +L+    D D  
Sbjct: 2691 VVSDMDANFIILQKSKFKYNDEDSYKLSSVSLFNHGSIINKMLPLSNTNLIEE--DYDKR 2748

Query: 982  QIPT----VIFGTVNGVIGVIASLPHEQYLFLEK---LQTNLRKVIKGVGGLNHEQWRSF 1034
             I T    ++  +  G I V+  +P   +   +K   ++  +   I  +G L+H  +R +
Sbjct: 2749 NILTKNDGILCASSEGSISVL--IPFSSFANFKKALCIEIAITDNISSIGNLSHNAYREY 2806

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLS 1059
                ++   K  +DG+L++ F  +S
Sbjct: 2807 KVNFRSKHCKGIVDGELLKMFFHMS 2831



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 6/108 (5%)

Query: 73  EAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGL 132
           + + +LF+ T +Y   +L++D + ++ IT +  ++ +  G   +   I ++D   + I  
Sbjct: 83  KVKSYLFVLTRKYVLLLLEYDVKENDFITLSKINLCELNGLHLEEDVIFLLDERHKTILF 142

Query: 133 HLYDGLFKVI--PFDNKGQLKEAFNIRLEELQVLDIKFL----YGCAK 174
           + Y  + K I   +DN   L   + +R++E  ++DI FL     GC K
Sbjct: 143 YGYKNILKYIYLDYDNFLNLNNVYTMRIDESLIIDIAFLGTHTMGCNK 190



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 338  YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 397
            Y+E+L    N+GPI+D CVV   +  + +++TC+   + G + I+++G+  N    +   
Sbjct: 970  YIEILSVIQNMGPILDMCVVK-NKNNEYEIITCNSYGRTGCVSIIQSGLKTNITCDLNFN 1028

Query: 398  GIKGMWSLR 406
             +   + ++
Sbjct: 1029 KLNNFFVVK 1037


>gi|240277254|gb|EER40763.1| cleavage factor two protein 1 [Ajellomyces capsulatus H143]
          Length = 1408

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 181/434 (41%), Gaps = 61/434 (14%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQ----SCAEESEMH-----------------F 745
            R I LGE    + +   S T+ I +  NQ    +  E+ E+H                  
Sbjct: 976  RKIGLGEQVDAVEYSSSSETYVIGT--NQKVDFNLPEDDEIHPEWRNEVISFLPQIDKGS 1033

Query: 746  VRLLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTK 800
            V+LL  +T+  I +Y L   E      C  L  S  + +      VGTA +   E+   +
Sbjct: 1034 VKLLTPRTWSIIDSYNLRNAERIMCVKCLNLEVSEITHERKDTIVVGTA-LTKGEDIAAR 1092

Query: 801  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 847
            G I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +  
Sbjct: 1093 GCIYIFEVIKVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG 1152

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D
Sbjct: 1153 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKD 1210

Query: 908  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
                 + A + L D   +Y L A+++ N+  ++ + E     +  RL     +  G F +
Sbjct: 1211 DGTLQVMAADFLPDGNRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFQTGHFAS 1270

Query: 965  RF----RHGSLVMRLPDSD--------VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
                  R  +   + PD+D         G +  V+  +  G I +I  +    Y  L  L
Sbjct: 1271 TMTLLPRTATSSSQGPDADPDMMDLDSSGPLHHVLVTSETGSIALITPVSETSYRRLSAL 1330

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
            Q+ L   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +  
Sbjct: 1331 QSQLANTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVKRWLDLGTQRKAEIANRVGA 1388

Query: 1073 SVEELCKRVEELTR 1086
             V E+   +E + +
Sbjct: 1389 DVWEIRADLEAIGK 1402


>gi|195583398|ref|XP_002081509.1| GD25678 [Drosophila simulans]
 gi|194193518|gb|EDX07094.1| GD25678 [Drosophila simulans]
          Length = 1450

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 181/404 (44%), Gaps = 64/404 (15%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 747
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 748  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 794
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1086 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1143

Query: 795  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 843
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1144 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1203

Query: 844  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 903
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1204 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1258

Query: 904  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 958
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1259 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYH 1316

Query: 959  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1317 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1375

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESF 1055
              L    + + GLN +++R+  + KK     ++  +DGDLI S+
Sbjct: 1376 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSY 1419



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 158/400 (39%), Gaps = 85/400 (21%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP-------QGLQP---------- 52
            H  T V  S    F +  + NL++A    ++++ + P       Q L P          
Sbjct: 8   THPATAVEFSIACRFFNNLDENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMR 67

Query: 53  ---MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSD 109
              +    +YG + +L+     G  +D L I+ +  K  VLQ D ++  L T ++    +
Sbjct: 68  LECLATYTLYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEE 127

Query: 110 RIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPFDNKGQLKE------------- 152
              R    G+  +    +DPD R   + +Y     V+PF     L E             
Sbjct: 128 DDIRGGWTGRYFVPTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAP 187

Query: 153 -----------AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKDAR-HVKTYE- 194
                      ++ I L +L      VLDI+FL+G  +PT+++LY+  +     +K    
Sbjct: 188 TAMVSRTPIMASYLIALRDLDEKIDNVLDIQFLHGYYEPTLLILYEPVRTCPGRIKVRSD 247

Query: 195 ------VALKDKDFVEG-PWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------- 239
                 ++L  +  V    W+ N+L      + P+  P+ G L++    ++Y        
Sbjct: 248 TCVLVAISLNIQQRVHPIIWTVNSLPFDCLQVYPIQKPIGGCLVMTVNAVIYLNQSVPPY 307

Query: 240 -----CSANAFKAIPIRP------SITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKE 287
                 SA+   A P++P      S+  A +  +D D  + ++    G L++L +  +  
Sbjct: 308 GVSLNSSADNSTAFPLKPQDGVRISLDCANFAFIDVD--KLVISLRTGDLYVLTLCVDSM 365

Query: 288 K-VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLI 326
           + V          + + S I  L +  +++GS  G+S L+
Sbjct: 366 RTVRNFHFHKAAASVLTSCICVLHSEYIFLGSRLGNSLLL 405



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 340 EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 383
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 384 NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 437
           N +      S EL G   +W++      +SS +D  D F+++S  + T  L +    E+ 
Sbjct: 545 NCLNPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNST--LVLQTGQEIN 601

Query: 438 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 475
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|225558298|gb|EEH06582.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 1408

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 181/434 (41%), Gaps = 61/434 (14%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQ----SCAEESEMH-----------------F 745
            R I LGE    + +   S T+ I +  NQ    +  E+ E+H                  
Sbjct: 976  RKIGLGEQVDAVEYSSSSETYVIGT--NQKVDFNLPEDDEIHPEWRNEVISFLPQIDKGS 1033

Query: 746  VRLLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTK 800
            V+LL  +T+  I +Y L   E      C  L  S  + +      VGTA +   E+   +
Sbjct: 1034 VKLLTPRTWSIIDSYNLRNAERIMCVKCLNLEVSEITHERKDTIVVGTA-LTKGEDIAAR 1092

Query: 801  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 847
            G I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +  
Sbjct: 1093 GCIYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG 1152

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D
Sbjct: 1153 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKD 1210

Query: 908  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
                 + A + L D   +Y L A+++ N+  ++ + E     +  RL     +  G F +
Sbjct: 1211 DGTLQVMAADFLPDGNRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFQTGHFAS 1270

Query: 965  RF----RHGSLVMRLPDSD--------VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 1012
                  R  +   + PD+D         G +  V+  +  G I +I  +    Y  L  L
Sbjct: 1271 TMTLLPRTATSSSQGPDADPDMMDLDSSGPLHHVLVTSETGSIALITPVSETSYRRLSAL 1330

Query: 1013 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 1072
            Q+ L   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +  
Sbjct: 1331 QSQLTNTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVKRWLDLGTQRKAEIANRVGA 1388

Query: 1073 SVEELCKRVEELTR 1086
             V E+   +E + +
Sbjct: 1389 DVWEIRADLEAIGK 1402


>gi|317157892|ref|XP_001826637.2| protein cft1 [Aspergillus oryzae RIB40]
 gi|391864317|gb|EIT73613.1| mRNA cleavage and polyadenylation factor II complex, subunit CFT1
            [Aspergillus oryzae 3.042]
          Length = 1389

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 64/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 746
            I+ IP+GE    + +   S  + I +         E+ E+H                  +
Sbjct: 957  IQQIPIGEQVDHLAYSSSSGMYVIGTSHRTEFKLPEDDELHPEWRNEMTSFFPEVQRSSL 1016

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 801
            +++  +T+  I +Y L   E+  ++ + S     N +       VGTA+   E+   ++G
Sbjct: 1017 KVVSPKTWTVIDSYLLSPAEHVMAVKNMSLEISENTHERKDMIVVGTAFARGEDIA-SRG 1075

Query: 802  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
             + VF V            D KL+L+ ++  KGAV +L+   G+    + Q  +     L
Sbjct: 1076 CVYVFEVIKVVPDPKRPEMDRKLRLVGKEPVKGAVTALSEIGGQGFLIVAQGQKCIVRGL 1135

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            ++DG+    +      H+  +         ++ D +K +    Y  E   +   A+D + 
Sbjct: 1136 KEDGSLLPVAFMDVQCHVSVVKELKGTGMCIIADAVKGLWFAGYSEEPYKMSLFAKDLDY 1195

Query: 911  NWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              + A + L D      L A+++ NL  ++ + E        RL    ++H G F+    
Sbjct: 1196 LEVLAADFLPDGNKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFHTGNFI---- 1251

Query: 968  HGSLVMRLPDSDVG---------------QIP--TVIFGTVNGVIGVIASLPHEQYLFLE 1010
              S +  LP + V                +IP   ++  + NG +G++  +  E Y  L 
Sbjct: 1252 --STLTLLPRTSVSSEQMISDVDAMDVDIKIPRHQMLITSQNGSVGLVTCVSEESYRRLS 1309

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             LQ+ L   I+   GLN   +R+   E      +  LDG L+  +LD+S+ R  EI+  +
Sbjct: 1310 ALQSQLTNTIEHPCGLNPRAFRAV--ESDGTAGRGMLDGKLLFQWLDMSKQRKVEIASRV 1367

Query: 1071 NVSVEELCKRVEELT 1085
              +  E+    E ++
Sbjct: 1368 GANEWEIKADFEAIS 1382


>gi|212541400|ref|XP_002150855.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces marneffei ATCC 18224]
 gi|210068154|gb|EEA22246.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces marneffei ATCC 18224]
          Length = 1383

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 176/429 (41%), Gaps = 52/429 (12%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 746
            IR IPL E    + +   S T+ + +   Q     ++ E+H                  +
Sbjct: 951  IRRIPLNEQVDHLAYSTASGTYVVGTTHEQDFKLPDDDELHPEWATEEISLLPKVAYGSI 1010

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSI--LSCSFSDDSNV---YYCVGTAYVLPEENEPTKG 801
            +L++ +T++ I +Y     E   ++  ++   S+ +        VGT Y    E+   +G
Sbjct: 1011 KLINPKTWKVIDSYTFSPAERITAVENINLEISEKTGKRKDMIVVGTTYA-KGEDIAARG 1069

Query: 802  RILVFIVEDG-----------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
             + VF V D            KL+LI E+  +GAV +++   G+    + Q  +     L
Sbjct: 1070 NVYVFDVIDVVPDPDEPGTNLKLKLIGEESIRGAVTAVSGIGGQGFMIVAQGQKCMVRGL 1129

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            +DDG+    +      ++  +         ++GD  K +    Y  E   +    +D + 
Sbjct: 1130 KDDGSLLPVAFIDVQCYVSVIKELKGTGMCLIGDAFKGLWFTGYSEEPYKMTLFGKDLDE 1189

Query: 911  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              +   + L D   +Y L A+ + NL+ ++ + E        RL    ++H+G F +   
Sbjct: 1190 LEVVTADFLPDGKKLYILVADGDCNLYVLQYDPEDPKSSNGDRLLNRCKFHMGHFASTLT 1249

Query: 968  -------HGSLVMRLPDS-DVGQ---IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
                      L +   DS D+     +   +  T +G + +I SL  E Y  L  LQ+ L
Sbjct: 1250 LLPRTAVSSELAVMSSDSMDIDSYTPLYQALITTQSGSMALITSLSEESYRRLTALQSQL 1309

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
               ++   GLN   +RS   E   V  +  +DG L+  +LDLSR+R  EI+  +     E
Sbjct: 1310 SNTLEHPCGLNPRAYRSV--ESDGVVGRGMIDGKLLMRWLDLSRSRKLEIAGRVGADEWE 1367

Query: 1077 LCKRVEELT 1085
            +   +E ++
Sbjct: 1368 IRADLEAVS 1376


>gi|260835073|ref|XP_002612534.1| hypothetical protein BRAFLDRAFT_58262 [Branchiostoma floridae]
 gi|229297911|gb|EEN68543.1| hypothetical protein BRAFLDRAFT_58262 [Branchiostoma floridae]
          Length = 318

 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 50/273 (18%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT-------PQGLQPMLDVPIYGRIA 63
           H PT V HS   NF S QE +L++A  T++ ++ L         Q ++ +    +YG I 
Sbjct: 9   HTPTTVEHSVWCNFISAQEKSLVVAGTTQLHVYRLKGDMEKSRKQKMELVASFSMYGNIM 68

Query: 64  TLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM----------GDVSDRIGR 113
           ++E  +  G  +D L ++    K  ++++D  + +L T +M          G VS+    
Sbjct: 69  SVESVQLAGSDRDALLLSFMDAKLSIVEYDPGTHDLKTASMHYFEEEEVKDGYVSNY--- 125

Query: 114 PTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEA-------------FNIRLEE 160
              +  +  +DP+ R   + +Y     V+PF  +G + EA             + I+L++
Sbjct: 126 ---HAPMVRVDPEGRCAVMLIYGKRLVVLPFRKEGAVDEAEMSAGSKSSILPTYMIKLQD 182

Query: 161 L-----QVLDIKFLYGCAKPTIVVLYQ-----DNKDARHVKT---YEVALKDKDFVEG-P 206
           L      V+D++FL+G   PT+++LY+       + A    T     V+L     V    
Sbjct: 183 LDERLINVVDLQFLHGYFDPTLLILYEPLQTWPGRVAVRQDTCCIVAVSLNIAQRVHPII 242

Query: 207 WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
           WS  NL       + VP P+ GVL+    +++Y
Sbjct: 243 WSVGNLPFDCKQAVAVPKPIGGVLVFAVNSLLY 275


>gi|440793679|gb|ELR14857.1| CPSF A subunit region protein [Acanthamoeba castellanii str. Neff]
          Length = 1477

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 174/424 (41%), Gaps = 66/424 (15%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAIC----------------------------------- 730
            +R +PLG  PR I +   SRT+ +                                    
Sbjct: 1053 VRKVPLGRTPREIAYHPPSRTYVVALATPVTTVVPTPPETDMERQEREREEEESREMGIE 1112

Query: 731  ------SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD-SNVY 783
                   +  +  A   E H + L+  +T++ +    L+  E+  ++      D+ S V 
Sbjct: 1113 PEEKQRDMGPREIAMMEERHELHLISPRTWQILHHVELEPKEHVLTLSVLKLGDNYSQVN 1172

Query: 784  YCVGTAYVLPEENEPTKGRILVFIVEDGKLQL-----IAEKETKGAVYSLNAFNGKLLAA 838
              +   ++L  E       I V   E  KL +     + EK  KG V +  +  G L+ A
Sbjct: 1173 RELRPPHLLIYE-------IDVTGEEQCKLTMAYQKPMKEKPMKGPVSAAASLQGYLIIA 1225

Query: 839  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 898
            +  KI ++ +   D G+ E  +      +I++  ++T  +F++ GD+ KSI  L +K   
Sbjct: 1226 VGPKIWVFNF---DGGSTEAVAFYDAPHYIVS--IKTLKNFVLCGDIYKSIFFLRWKDSA 1280

Query: 899  GAIEERARDYNANWMSAVEILDD--DIYLGAENNFNLFTVRKNSEGATDEERGRLEVV-G 955
              +   A+D     + A E + D  ++ L   +      V   +    +   G+L V  G
Sbjct: 1281 SQLALLAKDVGRVSVFATEYVVDKQNLALLMSDERQNLQVTAYAPHTAESRGGQLLVPRG 1340

Query: 956  EYHLGEFVNRFRHGSLVMRLPDSDVG-QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 1014
            ++++G+ +N+F    L M LP      Q   + FGT++G +G +A +    +  L  LQ+
Sbjct: 1341 DFNVGQSINKFVR--LPMTLPSGTTSLQRHALWFGTLSGGVGYLAPMDESVFRRLGMLQS 1398

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN-FLDGDLIESFLDLSRTRMDEISKTMNVS 1073
             L   I    GL+ + +R+   E+   + K+  LDG L+  +L L      +I+  +  S
Sbjct: 1399 ALLSAIPHTAGLHPQAYRALQRERLLRNRKHTILDGLLLSRYLALDSATQQQIALKLGTS 1458

Query: 1074 VEEL 1077
             E +
Sbjct: 1459 RERI 1462



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/326 (20%), Positives = 126/326 (38%), Gaps = 80/326 (24%)

Query: 4   WNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL------------------ 45
           +N+      PT V       FTS  ++NLI+AK   +E++ L                  
Sbjct: 3   YNFFNQVIPPTGVELCLSARFTSEDDINLIVAKTNVLEVYALHRHEDSKARPIDRQSTRP 62

Query: 46  --------------------TPQGLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERY 85
                               T   ++ +L   ++G I ++   R  G ++D L ++    
Sbjct: 63  TDGVISLRGEEPKDAPPYAGTQHSMRLVLSSSLFGNIESMAAVRFPGTSKDALLLSFRDA 122

Query: 86  KFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGI----IDPDCRLIGLHLYDGLFKV 141
           K  VL++D  +++L T ++    D   +   +  I +    +DP  R   +  +D    V
Sbjct: 123 KISVLEFDIATNDLRTISLHYFEDYKVKEGHDHYIHVPELRVDPQQRCAAMLAFDRKLVV 182

Query: 142 IPF---------DNKGQ----LKEAFNIRLEELQVLDIK---FLYGCAKPTIVVLYQDNK 185
           +PF         +N GQ    +K +F + L  + ++++K   FL G  +PT+++LY+  +
Sbjct: 183 LPFRQHASLMEIENGGQEDQPVKPSFLLDLRAMGIINVKDFVFLQGYYEPTLLILYEPTQ 242

Query: 186 DARHVKTYEVALKDKDFVEGP------------------WSQNNLDNGADLLIPVPPPLC 227
                 +  VA+     V                     WS   L      LI VP P+ 
Sbjct: 243 ----TWSGRVAVNRNTCVAAAVSLNLWQHRGQTSAHPVVWSAEFLPYDTQRLIAVPGPIG 298

Query: 228 GVLIIGEETIVYCSANAFKAIPIRPS 253
           G L +   +++Y +  +F    I P+
Sbjct: 299 GALALSTNSLLYLNQVSFPYRLILPA 324



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 18/121 (14%)

Query: 340 EVLERYVNLGPIVDFCVVD---------LERQGQG--QVVTCSGAYKDGSLRIVRNGIGI 388
           +V +  VN+GPI DF + +          E++GQ   ++VTCSG  K+GSL ++++G+  
Sbjct: 530 KVCDSLVNVGPITDFAIGESFDPASVSMAEQEGQRSVEIVTCSGQGKNGSLCVLQHGVRP 589

Query: 389 N-EQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 441
               AS +L G K  W+L      R   +  +  +L++S   +TR++A +  DEL   E 
Sbjct: 590 ELVHASADLAGCKAFWTLYHRSEERQGEEAEYHAYLLLSEEEQTRVIAGDGLDELSNEET 649

Query: 442 E 442
           +
Sbjct: 650 D 650


>gi|148908999|gb|ABR17603.1| unknown [Picea sitchensis]
          Length = 471

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 6/116 (5%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQ--GLQPMLDVPI 58
           MSIWNYVVTAHKPTNVTHSCVGNFT+P ++NLIIA  T      L  +  GL   +  P+
Sbjct: 1   MSIWNYVVTAHKPTNVTHSCVGNFTNPHDINLIIAPMTNSAKTSLVCKRSGLIRSIAEPM 60

Query: 59  YGRIATLELFRPHGEAQ---DFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
              + T ++ R    A+    +LF    R +   +Q     + +I+  +GD ++ I
Sbjct: 61  EKTVYTTKVLRNGNIAKLQAGYLFPEIGRRRSAHMQ-KYPDANVISLGIGDTTEPI 115


>gi|255948500|ref|XP_002565017.1| Pc22g10080 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592034|emb|CAP98296.1| Pc22g10080 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1392

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 158/375 (42%), Gaps = 45/375 (12%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 800
            ++++  +T+  I +YPLD  E   ++ + +     N +       VGTA ++  E+ P +
Sbjct: 1019 IKVVSPKTWTIIDSYPLDPDEQVTAVKNVNIEVSENTHERRDLIVVGTA-IVKGEDMPAR 1077

Query: 801  GRILVFIV----------EDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 849
            G I VF V          E G KL+LI ++  KGAV +L+   G+    + Q  +     
Sbjct: 1078 GTIYVFDVIKVAPDPEKPETGHKLKLIGKESVKGAVTALSGIGGQGFVIVAQGQKCMVRG 1137

Query: 850  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            L++DG+    +      ++           +++GD +K +    Y  E   +    +D  
Sbjct: 1138 LKEDGSLLPVAFMDMQCYVTVAKELKGTGLVILGDAVKGLWFAGYSEEPYRMTLFGKDPE 1197

Query: 910  ANWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
               + A + L D   +Y L A+++ NL  ++ + E        RL    +++ G F    
Sbjct: 1198 YLEVVAADFLPDGNKLYMLVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFYTGNF---- 1253

Query: 967  RHGSLVMRLPDSDVGQIPT-----------------VIFGTVNGVIGVIASLPHEQYLFL 1009
               S V  LP + V    T                 V+  + NG + ++ S+  E Y  L
Sbjct: 1254 --ASSVTLLPRTAVSSERTESSEEGMDLDETFARHQVLIASQNGSLALVTSVAEESYRRL 1311

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
              LQ+ L   +    GLN   +R+   E      +  +DG+L+  +L++ + R  EI+  
Sbjct: 1312 SALQSQLINTVDHPAGLNPRAFRAI--ESDGAAGRGMVDGNLLRLWLNMGKQRQTEIAGR 1369

Query: 1070 MNVSVEELCKRVEEL 1084
            +  +  E+   +E +
Sbjct: 1370 VGATEWEIKADLETI 1384


>gi|389609725|dbj|BAM18474.1| spliceosomal protein sap [Papilio xuthus]
          Length = 367

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 36/266 (13%)

Query: 799  TKGRILVFIV--EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 856
            T+G + V+ +    GKL+L+ +        +L AFNGKL+A + + +++Y     D G R
Sbjct: 112  TEGSLHVYKIFSNTGKLELVHKTPIDDYPGALAAFNGKLMAGVGRMLRMY-----DIGRR 166

Query: 857  ELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 915
            +L  +C   H   L   ++T G  I V D+ +S+  + YK  E  +   A D N  W++ 
Sbjct: 167  KLLRKCENRHIPNLIADIKTIGQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITN 226

Query: 916  VEILDDDIYLGAENNFNLFTVRKNSEGATDE------------ERGRL-------EVVGE 956
              +LD D  +   + F   +V +     +D+            +RG L       E+V  
Sbjct: 227  TCVLDYDT-VAMSDKFGNVSVMRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKGEIVVN 285

Query: 957  YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTN 1015
            +H+GE V   +  +L+        G    +++ T++G +GV+      E + F + L+ +
Sbjct: 286  FHVGETVASLQRATLI-------PGGSEALLYATISGALGVLLPFTSREDHDFFQHLEMH 338

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTV 1041
            +R     + G +H  +RS+    K V
Sbjct: 339  MRSENSPLCGRDHLSFRSYYYPVKNV 364


>gi|218194461|gb|EEC76888.1| hypothetical protein OsI_15095 [Oryza sativa Indica Group]
          Length = 1503

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/409 (22%), Positives = 175/409 (42%), Gaps = 112/409 (27%)

Query: 149 QLKEAFNIRLEEL---QVLDIKFLYGCAKPTIVVLYQDNKD------ARH----VKTYEV 195
           +++ ++ I L  L    V D  F++G  +P +V+L++          ++H    +  + +
Sbjct: 234 RIESSYLIDLRALDMNHVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFSI 293

Query: 196 ALKDKDFVEGP--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY------CSA--NAF 245
           ++  K   + P  WS  NL + A  L+ VPPP+ GVL+I   +I Y      CS   N F
Sbjct: 294 SMTLK---QHPVIWSAANLPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNF 350

Query: 246 KAIPI-RPSITKAYGRVDADGSR--------YLLGDHAGLLHLLVITHEKEKVTGLKIEL 296
            + P   P I+K+  +V+ D ++         +    AG + LL + ++   V  L +  
Sbjct: 351 SSHPDGSPEISKSNFQVELDAAKATWFSNDIVMFSSKAGEMLLLTVVYDGRVVQRLDLMK 410

Query: 297 LGETSIASTISYLDNAVVYIGS----------SYGDSQLI-------------------- 326
              + ++S ++ + N+  ++GS          SYG S+ +                    
Sbjct: 411 SKASVLSSAVTSIGNSFFFLGSRLGDSLLVQFSYGASKSVLQDLTNERSADIEGDLPFSK 470

Query: 327 -----------------KLNLQ----PDA-----KGSYVEVLERYVNLGPIVDFC----- 355
                            +L+ Q    P++     K SY+ V +  +N+GP+ DF      
Sbjct: 471 RLKRIPSDVLQDVTSVEELSFQNIIAPNSLESAQKISYI-VRDALINVGPLKDFSYGLRA 529

Query: 356 -----VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL----- 405
                 +   +Q   ++V CSG  K+GSL +++  I  +    VEL   +G+W++     
Sbjct: 530 NADPNAMGNAKQSNYELVCCSGHGKNGSLSVLQQSIRPDLITEVELPSCRGIWTVYYKSY 589

Query: 406 --RSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL 451
             + + D+ +  +L++S   E R + +   D+L E TE   +  Q  T+
Sbjct: 590 RGQMAEDNEYHAYLIISL--ENRTMVLETGDDLGEVTETVDYFVQASTI 636



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 90/411 (21%), Positives = 167/411 (40%), Gaps = 87/411 (21%)

Query: 754  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 807
            +E  ST P+  FE   ++    L  + + ++     +GTAYVL E+    +GR+L+F  +
Sbjct: 1095 WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVLGED-VAARGRVLLFSFM 1153

Query: 808  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAA-------------------------- 838
              +    L+ E   KE+KGAV ++ +  G LL A                          
Sbjct: 1154 KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGAELTAVAFYDAPLH 1213

Query: 839  ---------------INQKIQLYKW---------MLRDDGTRE-LQSECGHHGHILALY- 872
                           I++ I    W         + +D G+ +   +E    G  L+L  
Sbjct: 1214 VVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLVA 1273

Query: 873  ------VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 926
                  VQ + +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   L 
Sbjct: 1274 SDSDKNVQVK-NFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLS 1332

Query: 927  -----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 980
                 ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP   +
Sbjct: 1333 LVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQGL 1386

Query: 981  GQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF-- 1034
                T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F  
Sbjct: 1387 SSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQFHS 1446

Query: 1035 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
            N +       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 1447 NGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 1497


>gi|384946686|gb|AFI36948.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
          Length = 1428

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 142/346 (41%), Gaps = 55/346 (15%)

Query: 670  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 724
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 971  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1030

Query: 725  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 759
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1031 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1090

Query: 760  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 809
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1091 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1149

Query: 810  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1150 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1204

Query: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1205 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1264

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
             LG   ++ + NL       E        RL    ++H+G  VN F
Sbjct: 1265 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF 1310



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 119/632 (18%), Positives = 245/632 (38%), Gaps = 170/632 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEG--P--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +   P  WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLI----KLNLQP------------------- 332
               + + +++  ++   +++GS  G+S L+    KL   P                   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKR 423

Query: 333 -DAKGSY--------------------------------VEVLERYVNLGPIVDFCVVD- 358
            DA  S+                                 EV +  +N+GP  +  + + 
Sbjct: 424 VDATASWSAGGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAMGEP 483

Query: 359 --LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL----- 405
             L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++     
Sbjct: 484 AFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVR 543

Query: 406 RSSTDDP-------------------FDTFLVVSFISETRILAMNLEDELEETEIEGFCS 446
           +   D+P                      FL++S    T IL      E+ E +  GF +
Sbjct: 544 KEEEDNPKGEGTEQEARSPEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFAT 601

Query: 447 QTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 QGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 633


>gi|242798830|ref|XP_002483249.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218716594|gb|EED16015.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 1382

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 177/435 (40%), Gaps = 64/435 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 746
            IR IPL E    + +   S T+ + +   Q     +  E+H                  +
Sbjct: 950  IRKIPLNEEVDYLAYSTVSGTYVVGTTHEQDFKLPDNDELHPEWANEDISLRPKVAQGSI 1009

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTKG 801
            +LL+ +T++ I +Y  +  E   +I + +      + +      VGT +    E+   +G
Sbjct: 1010 KLLNPKTWKVIDSYTFNAAERITAIENINLEISEKTSERKDMIVVGTTFA-KGEDIAARG 1068

Query: 802  RILVFIV--------EDG---KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
             + VF V        E G   KL+LI E+  +GA+ +++   G+    + Q  +     L
Sbjct: 1069 NVYVFDVINVVPDPDEPGTNLKLKLIGEESVRGALTAVSGIGGQGFLIVAQGQKCMVRGL 1128

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            +DDG+    +      ++  +         ++GD +K +    Y  E   +    +D + 
Sbjct: 1129 KDDGSLLPVAFIDVQCYVSVIKELKGTGMCLIGDALKGLWFTGYSEEPYKMTLFGKDLDE 1188

Query: 911  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              +   + L D   +Y L A+++ NL  ++ + E        RL    ++H+G F     
Sbjct: 1189 LEVVTADFLPDGKKLYILVADSDCNLHVLQYDPEDPKSSNGDRLLNRCKFHMGHF----- 1243

Query: 968  HGSLVMRLPDSDVGQ---------------IP--TVIFGTVNGVIGVIASLPHEQYLFLE 1010
              S +  LP + V                 IP    +  T +G++ ++ SL  E Y  L 
Sbjct: 1244 -ASTITLLPRTAVSSELAVMNSDSMDIDSYIPLHQALITTQSGLMALVTSLSEESYRRLS 1302

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             LQ+ L   ++   GLN   +R+   E   V  +  +DG L+  +LDLSR R  EI+  +
Sbjct: 1303 ALQSQLSNTLEHPCGLNPRAYRAV--ESDGVVGRGMIDGKLLMRWLDLSRPRKLEIAGRV 1360

Query: 1071 NVSVEELCKRVEELT 1085
                 E+   +E ++
Sbjct: 1361 GADEWEIRADLEAVS 1375


>gi|425765419|gb|EKV04111.1| Cleavage and polyadenylation specificity factor subunit A, putative
            [Penicillium digitatum Pd1]
 gi|425767100|gb|EKV05682.1| Cleavage and polyadenylation specificity factor subunit A, putative
            [Penicillium digitatum PHI26]
          Length = 1271

 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 176/434 (40%), Gaps = 64/434 (14%)

Query: 706  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 746
            +R +P+ E    + +   S T+ + + +       E  E+H                  +
Sbjct: 839  LRKVPIEEQVNFLAYSTSSETYVLGTSRQGDFKLPEGDELHPEWRNEELSFCPKIPESSI 898

Query: 747  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 801
            +++  +T+  I +YPLD  E   ++ + +     N +       VGTA +   E+ P +G
Sbjct: 899  KVVSPKTWTIIDSYPLDPDEQVTAVKNVNIEVSENTHERMDLIVVGTA-IAKGEDMPARG 957

Query: 802  RILVFIV----------EDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
             I VF V          E G KL+LI ++  KGAV +L+   G+    + Q  +     L
Sbjct: 958  TIYVFDVIKVAPDPERPETGRKLKLIGKETVKGAVTALSGIGGQGFIIVAQGQKCMVRGL 1017

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            ++DG+    +      ++  +        +++GD +K +    Y  E   +    +D   
Sbjct: 1018 KEDGSLLPVAFMDMQCYVNVVKELKGTGMVILGDAVKGLWFAGYSEEPYRMTLFGKDPEY 1077

Query: 911  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              + A + L D   +Y L A+++ NL  ++ + E        RL    +++ G F     
Sbjct: 1078 LEVVAADFLPDGNKLYMLVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFYTGNF----- 1132

Query: 968  HGSLVMRLPDSDVGQIPT-----------------VIFGTVNGVIGVIASLPHEQYLFLE 1010
              S V  LP + V    T                 V+  + NG + ++ S+  E Y  L 
Sbjct: 1133 -ASSVTLLPRTAVSSELTESSEEAMDVDETFAKYQVLIASQNGSLALVTSVAEESYRRLS 1191

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             LQ+ L   +    GLN   +R+   E      +  +DG+L+  +L++ + R  EI+  +
Sbjct: 1192 GLQSQLINTVDHPAGLNARAFRA--TESDGAAGRGMVDGNLLRLWLNMGKQRQAEIAGRV 1249

Query: 1071 NVSVEELCKRVEEL 1084
              +  E+   +E +
Sbjct: 1250 GATEWEIKADLETI 1263


>gi|399216612|emb|CCF73299.1| unnamed protein product [Babesia microti strain RI]
          Length = 1195

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 162/767 (21%), Positives = 306/767 (39%), Gaps = 97/767 (12%)

Query: 254  ITKAYGRVDADGSR-YLLGDHAGLLHLLVIT--HEKEK-VTGLKIELLGETSIASTIS-- 307
            + ++  R+  D +  Y   D  G L++  IT  HEK+K +   K+  L       TIS  
Sbjct: 350  LQRSLSRIGDDETHLYYACDVTGQLYMFKITIKHEKDKYLINDKMRNLDTIIPLYTISPF 409

Query: 308  ----YLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG 363
                 L +  +++ +  GDS++++L     + G   E+  +  +L PI+D  V+      
Sbjct: 410  SLLLALSDDCIFVATRVGDSKILQL-----SNGKVSEIWSK-PSLSPIIDATVIG--GNC 461

Query: 364  QGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFIS 423
              Q++  SG  K  ++ I+  G+  +   ++ L  +  ++ + S    P   FLV   I+
Sbjct: 462  TDQLIAVSGIGKSANISILTIGLFFHNICNISLAKVSKLFIISSQ---PEMIFLVA--IT 516

Query: 424  ETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS-STSRELRNE 482
             T+     + D+  E       S+   + C     NQL Q+T  S+R+ +    R  +  
Sbjct: 517  STQSYYFKMVDQSIE-----LISRGDKIICAFQYNNQLYQLTPNSIRISTIDNPRITKVL 571

Query: 483  WKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGE 542
            W S       V       +L+ +GG +L  L I      ++ +  ++   S     PI  
Sbjct: 572  WTSDEPI---VHYLKCENMLIISGGYNLSALVIDKSDPIKITYNHIQSFTS-----PI-- 621

Query: 543  NPSYSQIAAVGMWTDISVRIFSLPDLNLIT---KEHLGG--EIIPRS-------VLLCAF 590
                S IA V     + + + +  ++ LI     + +G   EI  R+       ++    
Sbjct: 622  ----SAIALVENMNKLHILVATFTNVLLIVDCETKSIGTICEIPTRTSCVGVSDLVYVVK 677

Query: 591  EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN----TTHVFAA 646
              I Y+   L DG+LL +          +R+ V    +      F SKN      +    
Sbjct: 678  NSIYYIFIGLTDGNLLVYT--------NEREDVRHFLECKGWEFFMSKNFGVYPLYFKHN 729

Query: 647  SDRPTVIYSSNKKLLYSNVNLKEVSHMC----PFNSAAF-PDSLAIAK-EGELTIGTIDD 700
            S R T+I      + +S +  + V  +     P     F  D L IA     L +G + D
Sbjct: 730  SQRLTLIGQHVHFVTFSPITGRIVDFLSLEVPPVRDLEFISDDLLIASLTDHLELGKLSD 789

Query: 701  IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTY 760
               L +R IP+      I + + S    +   +  S +      ++ +    T   ++TY
Sbjct: 790  CNSLDVRRIPVSGALDLIEYHQPSNCVIVAFPQLTSESIFPSNAYIAVYSFVTGLLVTTY 849

Query: 761  PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--------K 812
             L+    G SI   +F+  S+    +G +     +  P++GRI+  I  +         K
Sbjct: 850  YLEQSFEGSSI--STFTRGSDKTLLIGISST-DSDYLPSQGRIVACIYNNSTFTFKDSYK 906

Query: 813  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR------ELQSECGHHG 866
                  +   G V  +      + A +N  + +   +L             + SEC    
Sbjct: 907  FDKDLPEVPSGGVLQICTSKNFVFAGVNHSLVVLTPILHGRSWEGELSPIYIYSECN--- 963

Query: 867  HILALYVQTRGDFIVVGDLMKSISLL-IYKHEEG-AIEERARDYNANWMSAVEILDDDIY 924
              + + +    D +++ D++  + LL I+    G ++EE A+D + +W S  +++D +  
Sbjct: 964  --MIIGIDVCNDLVLLTDIITGVKLLKIFSDTNGDSVEEIAKDTDTSWCSCAKLIDQNHI 1021

Query: 925  LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 971
            L ++   N+  ++   E   DE+   L  + ++HLGE VN+   G  
Sbjct: 1022 LVSDTKGNITLLKLIDEPINDEQCYILTKIAKFHLGECVNKIVIGKF 1068


>gi|84999522|ref|XP_954482.1| damage-specific DNA binding protein 1 [Theileria annulata]
 gi|65305480|emb|CAI73805.1| damage-specific DNA binding protein 1, putative [Theileria annulata]
          Length = 1501

 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 39/273 (14%)

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
            D+ T  L     +  +   + + T+ D I VGDLM S+ +L  K  + ++ E  RD+N  
Sbjct: 1218 DENTPFLDVVASYDSNTFVVSLDTKDDVIFVGDLMTSVKML--KFRDNSLHETCRDFNTL 1275

Query: 912  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF--RHG 969
            W +++  +D+   L ++++ N   ++K     TD++  + + +G +H GE VN+   R  
Sbjct: 1276 WTTSLVAVDNSSCLVSDDSGNFMLLKKVKHPVTDQQSIKFDKIGLFHHGEVVNKILKRTE 1335

Query: 970  SLVMRLPDSDVGQIPTVIFGTVNGVI--------GVIASLPHEQYLF------------- 1008
              +    D+ + +     F   + VI           +SL     LF             
Sbjct: 1336 MPIHHEADTTITRNNPREFMVSSRVICESETNSPSETSSLNEHNNLFKGFFTCATTSGSL 1395

Query: 1009 --------------LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
                          L  L+  ++ V K +G +     R+F +    +  + F+DGDL+ES
Sbjct: 1396 FQVCFFEDLKMFLKLSLLEHTMQLVQKDLGNIPSRNQRNFEDLHSNIPTRGFVDGDLVES 1455

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            FL L  +    +  TM ++ ++L  ++  L  L
Sbjct: 1456 FLKLPDSLKKWVFDTMLINSKQLGIKLNSLESL 1488



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 10/146 (6%)

Query: 297 LGETSIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLER---------YVN 347
           LG   + S++  LD   ++  S  GDS ++ +N   ++   Y +  E+           N
Sbjct: 433 LGNFPVPSSLIKLDEEHIFYTSKMGDSSILSINSILNSSNRYEQNSEQSDRNSTEWAQTN 492

Query: 348 LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-R 406
           LGPI DF   +    G+  ++ C G    GS   +  G+        ++ G+  ++S+  
Sbjct: 493 LGPITDFAYREETSSGETTILACCGMGNSGSFCEIYLGLSSEIIHESDVPGVLNLFSVPM 552

Query: 407 SSTDDPFDTFLVVSFISETRILAMNL 432
            S  +   + L +SF   T+    +L
Sbjct: 553 KSLYNSTSSLLCISFFRFTKFYNFSL 578


>gi|403373826|gb|EJY86839.1| hypothetical protein OXYTRI_09860 [Oxytricha trifallax]
          Length = 1380

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 174/436 (39%), Gaps = 76/436 (17%)

Query: 31  NLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRP-----------------HGE 73
           NLI+A+   + I  +    ++   ++PI  +I  + L  P                 + +
Sbjct: 56  NLIVARSNHLAIMKIIDNDIEDFYEIPINDQIVQI-LKVPSDPFNEKAGKIQIGGSANKK 114

Query: 74  AQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLH 133
            QD++F+ T  +  C+L        ++  + G++SD  G+  +      +  D R IGL 
Sbjct: 115 VQDYIFVLTADFN-CLLFAHDTKQGIVCLSTGNISDVTGQKREPPYSVFLGSDGRYIGLM 173

Query: 134 LYDGLFKVIPF----DNKGQLKEAFNIRL---EELQVLDIKFLYGCAKPTIVVLYQDNKD 186
           LY+ + K+IP     + K  L  AFN+R+   E  Q++ +          I V YQ   +
Sbjct: 174 LYENIIKIIPLVKGQNGKLALSNAFNVRIKHPEAHQIIPLLDDEQNGHSAIAVFYQQQPN 233

Query: 187 AR----------HVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEET 236
                        +K Y + + +KD +E   ++  LD     +I V     G  I  +  
Sbjct: 234 RTINPNNTYFQLKLKKYYLNILEKD-IEPAQNEQQLDFENMHIIRVKELEFGGFIAFDPE 292

Query: 237 IVYCSANAFKA--------IPIRPSITKAYGRVDA---------DGSRYLLGDHAGLLHL 279
            ++C      +         P++ +   A  + D             RYL     G L+L
Sbjct: 293 NIHCYKKRINSKIISKKLRKPMKVTSITAIDQYDPLTKRTKQGLQLMRYLFATECGDLYL 352

Query: 280 LVITHE-------------KEKVTGLKIELLGET-SIASTISYLDNAVVYIGSSYGDSQL 325
           L    E              E  + + IE L +     +T++YLDN + + GS   DS L
Sbjct: 353 LAFNLEYLHLVTSIGNINPHEATSFMMIEFLAQKLPSCTTLNYLDNGLFFYGSKLADS-L 411

Query: 326 IKLNLQPDAKGS----YVEVLERYVNLGPIVDFCVVDLE--RQGQGQVVTCSGAYKDGSL 379
             L L+ +  G     Y+ + +RY +LG I D  + + +  R  Q  +V   G   +  +
Sbjct: 412 TAL-LETENTGHKDYLYISIRKRYESLGCISDLAIREQQNIRGQQKDLVVVGGQGHNSHI 470

Query: 380 RIVRNGIGINEQASVE 395
            ++R G+ +   A+ +
Sbjct: 471 SVLRKGVSVKTLAATD 486



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/360 (19%), Positives = 151/360 (41%), Gaps = 29/360 (8%)

Query: 642  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK---------EGE 692
            H   + D P +   S+K+ +YS        H    N      ++ I           + +
Sbjct: 817  HKLKSDDGPIIYVQSSKQAIYSLTRQTLQMHFINENDIKQARTMMIEDKCIFVYENTQNQ 876

Query: 693  LTIGTIDDIQKLHIRSIPLGEHPRRICH-QEQSRTFAICSLKNQSCAE--ESEMHFVRLL 749
            +  G +D+     ++ I   +   +I     ++   A+  + N    +     ++ + LL
Sbjct: 877  IIFGQLDNFNSTQLKQIKFDKEVCKISLVPNENLMIALMEVPNYEYLDLNSPAVNQIALL 936

Query: 750  DDQTFEFISTYPLDT---------FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTK 800
            D  T E +  + L           FE   S  + S  + S  Y  +GTA +  +E  P+K
Sbjct: 937  DSSTMEMLELFSLQKEEIASCLYLFEKKPSSATLSIRNQSR-YVAIGTAIIKTDEYLPSK 995

Query: 801  GRILVFIVEDGKLQLIAEK--ETKGAVYSLNAF--NGKLLAAINQKIQLYKWMLRDDGTR 856
            GR+++F ++  + +LI +   +T G+V S+     +  L+  +N  +QL+   ++    +
Sbjct: 996  GRLMIFEIDTRQRKLIIKHSFQTNGSVQSIAMLRDDKYLVLGVNNDLQLFSMQIKPQEIK 1055

Query: 857  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE--GAIEERARDYNANWMS 914
                +    G  +   +    + +VVGD+M+++    +K ++    + E A   ++ W++
Sbjct: 1056 LQLLQTLQVGTAIQ-QIFAVNNTVVVGDIMRALYTFDFKEQKQNKLLNESAHTNHSIWVN 1114

Query: 915  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 974
             +  L +   +  +   N+F   KN     D E+ +L +V    +GE   +   GSL ++
Sbjct: 1115 TMLPLSESNTMVFDKECNMFVFNKNLLPTNDHEKFKLNMVACMKIGEEATKAIFGSLAIQ 1174


>gi|164655043|ref|XP_001728653.1| hypothetical protein MGL_4214 [Malassezia globosa CBS 7966]
 gi|159102535|gb|EDP41439.1| hypothetical protein MGL_4214 [Malassezia globosa CBS 7966]
          Length = 1212

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/378 (21%), Positives = 152/378 (40%), Gaps = 36/378 (9%)

Query: 713  EHPRRICHQEQSRTFAIC-SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSI 771
            E P R   Q+ +RT+A C +L+      E  +H       +T   +   P+D  + G   
Sbjct: 830  EQPVRDPKQDPTRTYAACGALELLVRVGEPPVHGYEFSACETVSALHMAPMDCLDRGSGR 889

Query: 772  LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG------------KLQLIAEK 819
             +      +  Y           E+  +KG + VF V +             +LQL+  +
Sbjct: 890  RTFVVVGTTVTY----------GEDRSSKGHMYVFDVVECVPSEGMAASDALRLQLLCTE 939

Query: 820  ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDF 879
            E +  V +L+  NG L+AA+ QK+ +  W    +    L +       +    +Q   +F
Sbjct: 940  EMRAPVTALHDLNGFLVAAVGQKLLIRSW----EYCEWLVTVAFLDMGMYTTSIQRVKNF 995

Query: 880  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTV 936
            +++ D  +S   + ++ +   +    RDY    ++    L D   L     + N  L  +
Sbjct: 996  LLLTDYYQSAYFVAFQEDPARLVLLGRDYIPTSVTCGAFLIDRARLSIVTCDMNGCLRLM 1055

Query: 937  RKNSEGATDEERGRLEVVGEYHL-GEFVN-RFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 994
              +    T     RL    EYH  GE V  R  HG     L  S       ++    NG 
Sbjct: 1056 DYHPSNPTSLGGQRLLARCEYHAPGEVVRARMLHGPY---LATSGECLTSEIVLAKRNGA 1112

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS-FNNEKKTVDAKNFLDGDLIE 1053
            + V+  +  + +  L+  Q+ L ++++   GLN   +R+ FN       AK  LDG L+ 
Sbjct: 1113 VDVLVPVTEKIFPTLQLFQSQLVRMVRHTAGLNPRGFRAVFNQHISRPLAKGILDGTLLH 1172

Query: 1054 SFLDLSRTRMDEISKTMN 1071
            +   +SR ++  + + ++
Sbjct: 1173 TAESMSRPKLTSLVRDLS 1190


>gi|170576536|ref|XP_001893668.1| CPSF A subunit region family protein [Brugia malayi]
 gi|158600196|gb|EDP37499.1| CPSF A subunit region family protein [Brugia malayi]
          Length = 1323

 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 104/468 (22%), Positives = 200/468 (42%), Gaps = 62/468 (13%)

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLK-EVSHMCPFNSAAFPDSLAIAKE-------GELT 694
            VF  S  P + +  +       VNL   +     FN+A  P+      E        +L 
Sbjct: 891  VFICSSYPCIFFLESGVPRLHPVNLDGPILSFTTFNNAVCPNGFIYLTERDRFMRVAKLP 950

Query: 695  IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF 754
               I D     ++ I +G     + +   S T+A+ + + +   +      V + DD+TF
Sbjct: 951  SDMILD-ASYPVKRINVGATVHSVVYLLHSNTYAVLTSEKRKVTKMC----VLINDDKTF 1005

Query: 755  EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ 814
            E       DTF Y           + + Y       V+PE  +PT            +++
Sbjct: 1006 E--EHEKPDTFVY----------PEMDQY----KLQVVPEPGQPTSKH---------RIK 1040

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 874
             + +KE KG V SL + NG LL  + QK+  + W+ +D+  + + S    H +I  L + 
Sbjct: 1041 TLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKDNNLQGI-SFLDMHFYIHQL-IG 1096

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS--AVEILDDDIYLG-----A 927
             R +  +  D+ +S++LL Y+ E  A+   +RD  ++     A + L D+  +G      
Sbjct: 1097 VR-NLALACDMYRSLALLRYQEEYKALSLASRDMRSDVQPPMAAQFLIDNKQMGFIMSDE 1155

Query: 928  ENNFNLFTVRKNSEGATDEERG--RLEVVGEYHLGEFVNRF--RHGSLVMRLPDSDVGQI 983
              N  +F    N    T E  G  +L +  E ++G  VN F    G +     ++++  +
Sbjct: 1156 AANIAIF----NYLPETLESLGGEKLTLRAEINIGTVVNSFIRVKGHISSGFVENELFSL 1211

Query: 984  --PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT- 1040
               +V+F +++G  G +  L  + +  L  LQ  +  ++    GLN +  R+   ++   
Sbjct: 1212 ERQSVLFASLDGSFGYLRPLTEKVFRRLHMLQQLMSSMVLQPAGLNAKGARAARPQRPNH 1271

Query: 1041 -VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             ++ +N +DGD+   +L LS    +++++ +  S   +   + E+ R+
Sbjct: 1272 YLNTRNLVDGDVAMQYLHLSLPEKNDLARKLGTSRYHIIDDLIEICRV 1319



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 92/439 (20%), Positives = 177/439 (40%), Gaps = 94/439 (21%)

Query: 123 IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTI 177
           +DP  R   + ++     V+PF++      ++ ++L ++      V+D+ FL G  +PT+
Sbjct: 140 VDPGQRCASMLVFGRYLAVLPFNDSSTQLHSYTVQLSQIDSRLVNVVDMVFLDGYYEPTL 199

Query: 178 VVLYQDNKD--ARHVKTYE------VALKDKDFVEGP-WSQNNLDNGADLLIPVPPPLCG 228
           + LY+  +    R    Y+      V+L  K+ V    W   NL    + ++ +P P+ G
Sbjct: 200 LFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPRPVGG 259

Query: 229 VLIIGEETIVYCS-------------ANAFKAIPIRPSITKAYGRVDADGS--------R 267
           +L++    ++Y +              + F   P++     A   +  DG+        +
Sbjct: 260 ILLVATNELIYLNQSVPPCGISLNSCMDGFTKFPLKDFKHMA---LTLDGAVVTVVSTNK 316

Query: 268 YLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS--- 323
            LL D  G L  L+++T     V  L+++   ET I  T++      ++IGS   DS   
Sbjct: 317 ILLCDRNGRLFTLILVTDATNSVKSLELKFQFETVIPCTMTSCAPGYLFIGSRLCDSVFL 376

Query: 324 --------------QLIKLNLQPDAKGS------------------------YVEVLERY 345
                         + +KL+ +P+A                            + VL++ 
Sbjct: 377 HCIFEQSTLEESATKKMKLSTEPNANEEDEDFELYGEVLPKVAKPDVTEELLNIRVLDKL 436

Query: 346 VNLGPI---------VDFCVVDLERQGQGQVVTCS-GAYKDGSLRIVRNGIGINEQASVE 395
           +N+GP          V     ++ R+     + C+ G  K GS+ I++  I      S  
Sbjct: 437 LNVGPCKKITGGCPSVSAYFQEITRKDPLFDLVCACGHGKFGSICILQRSIRPEIITSSS 496

Query: 396 LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 455
           ++G+   W++    DD    F+      E   LA+  +++L E E   F +   T+   +
Sbjct: 497 IEGVVQYWAVGRREDDTHMYFIAS---RELGTLALETDNDLVELEAPIFSTSESTIAAGE 553

Query: 456 AIYNQL-VQVTSGSVRLVS 473
                L VQVT+ S+ +V+
Sbjct: 554 LADGGLAVQVTTSSLVMVA 572


>gi|213408090|ref|XP_002174816.1| predicted protein [Schizosaccharomyces japonicus yFS275]
 gi|212002863|gb|EEB08523.1| predicted protein [Schizosaccharomyces japonicus yFS275]
          Length = 1053

 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 170/803 (21%), Positives = 324/803 (40%), Gaps = 82/803 (10%)

Query: 27  PQELNLIIAKCTRIEIHLLTPQG-LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERY 85
           P E  +I+++  ++ ++ L+    L     +P++     L  +RP    QD+L I T+  
Sbjct: 23  PNENVIIVSRRLQLFVYTLSKNNELCERATIPLHANALHLLAYRPLDLEQDYLLIVTQDG 82

Query: 86  KFCVLQWDAESSEL-ITRAMGDVSDRIGRP-TDNGQIGIIDPDCRLIGLHLYDGLFKVIP 143
            +  + WD    ++ +   +   + +   P T      +++ + +L+ +   +   KV+ 
Sbjct: 83  YYFSVYWDDNFGKVALDSPLQMCTTQPSYPNTSWRSFCLVNQEAQLVLIRTSE--MKVLC 140

Query: 144 ---FDNKGQLKEAFNI------RLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYE 194
              F  + + ++ F+I       L    V+D+ FL     P + VL Q   D+  V  ++
Sbjct: 141 LSIFSEEQRKQQGFSIGDGAELLLPGYLVMDMCFLQHGNPPQVAVLSQ-TVDSTKVTVHK 199

Query: 195 VALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIR-PS 253
           + L+   F  G     N  +    L+ V     G++ +GE+ I Y   N    I IR PS
Sbjct: 200 LNLQSDSFDSGSVVLKN--SLYYKLMAVGKK--GLIALGEDNISY--FNRGTVISIRAPS 253

Query: 254 ITKA-YGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSI--ASTISYLD 310
           +  + Y  +     +++L    G ++ L       K+  L +E L  + +   S++  +D
Sbjct: 254 VRFSHYCALRGLKRQFVLVSAEGNVYTLSCNPLFHKLYTLMVEELPFSPVFNVSSVMAID 313

Query: 311 NAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQ-VVT 369
              ++  +  G   ++ L        SY  V E     G I D   +     G G  ++ 
Sbjct: 314 EERLFASNINGSIHILSL-------PSYT-VSEITAGHGAIHD---MQFFESGSGNTLLL 362

Query: 370 CSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFL--VVSFISETRI 427
           C+G+   GSL  + N +     +  +L G+  +W +       F + L   V   +ET++
Sbjct: 363 CAGSLNSGSLIYLCNSLSAEPISLFDLSGVLHVWPVH------FQSVLKLFVGMANETKV 416

Query: 428 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 487
             M     L E E +   S  ++     A  N  VQ+T+ S+R  + TS++       P 
Sbjct: 417 FTMV---SLYEAEFDPELSLDESTLALSACENGYVQITNKSLRYCTETSKD-----AIPL 468

Query: 488 GYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI-NPIGENPSY 546
               +V++  A   ++      ++Y      +  E+       E+S +D  +P+      
Sbjct: 469 EGITSVSSLGAYAAIVIDNTSLVIY-----NMTKEIARTTFSKEVSAVDFASPLR----- 518

Query: 547 SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALG--DGH 604
                VG W   ++ + ++ D + I         IPR VLL  F     L   +G  +G+
Sbjct: 519 ---IVVGFWNK-TMEMLAIRDNSFICVLRKSLNFIPRDVLL-QFSNDDRLHLFMGSDEGN 573

Query: 605 LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 664
           L   +  ++   +T+     LG+ PI           +V   +D+P ++Y  + KL +  
Sbjct: 574 LC--VATVEKSLITNMDYRVLGSTPIHFTRLLISTGAYVICTNDKPHMVYGLHGKLAFMP 631

Query: 665 VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 724
           +N+     +  F        L  A    ++I  +D+  KL +  +     P++    +Q+
Sbjct: 632 LNVPSSIDLNAFLDEKLRFCLVSAHSEGVSILHLDNQPKLSVTRLKTKLLPQKAAIIDQT 691

Query: 725 RTFAICSLKNQSCAEESEMH--FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV 782
             F+    +     E S  +      + DQ FE  S + LD FE   S+++ S S     
Sbjct: 692 VLFSGLKQQPNGLGELSAQYSLVCSKVYDQ-FELCS-FKLDEFEECTSVIASSSS----- 744

Query: 783 YYCVGTAYVLPEENEPTKGRILV 805
            + V TA   P       GR+LV
Sbjct: 745 LFVVTTAKKYPYNYFSVSGRLLV 767


>gi|326432241|gb|EGD77811.1| hypothetical protein PTSG_08901 [Salpingoeca sp. ATCC 50818]
          Length = 1506

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 162/400 (40%), Gaps = 69/400 (17%)

Query: 11  HKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIH-LLTPQG-------LQPMLDVPIYGRI 62
           H+P+ V H+    F   Q +NL+  +   + ++ L+  QG       L+  +   + G  
Sbjct: 9   HEPSAVRHAVQARFLDGQRVNLVTVQGNVLSVYNLVQAQGAADKRCHLEADISFTLDGVP 68

Query: 63  ATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELIT---RAMGDVSDRIGRPTDNGQ 119
             +   RP G ++D L    +  +  ++++D +  +L T    A  D   ++G      +
Sbjct: 69  QDVATVRPRGNSRDLLIFTFKDARVAIVRFDPKMRDLETVSLHAFEDTDTKLGGWHSEQR 128

Query: 120 IGI-IDPDCRLIGLHLYDGLFKVIPF-----------DNKGQLKEAFNIRLEEL------ 161
           + + +DP  R   L +Y     VI F           D +   +++F  R+ +L      
Sbjct: 129 LRVCVDPLHRCAALMVYGCKLIVISFSSGTATAAPEADTQEDTEQSFTSRVIDLLSLPST 188

Query: 162 --QVLDIKFLYGCAKPTIVVLYQ----------DNKDARHVKTYEVALKDKDFVEGP--- 206
             +V D+ FL G   P + +L+Q            KD  HV    +AL +      P   
Sbjct: 189 IGRVDDMAFLDGYDVPCLAILHQPRPAWVGHMAKTKDTAHVTALSLALDEMTARRAPTAP 248

Query: 207 --------WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSA--------NAFKAIPI 250
                   W Q NL +    L PVP PL GV++IG   + Y +         N +     
Sbjct: 249 PPPPPPVVWHQENLPSDTFALQPVPAPLGGVVVIGVNVLFYVTQSLVRSLALNGYSRAST 308

Query: 251 RPSITKAYG-RVDADGSRY--------LLGDHAGLLHLLVITHEKEKVTGLKIELLGETS 301
              I +  G  +D DG+ +        L    +G +HLL I      V GL+++ L  + 
Sbjct: 309 NAPIQEQTGISLDLDGAHHALLTPTQILFALPSGDIHLLTIVCTDVTVDGLRMDKLATSV 368

Query: 302 IASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEV 341
           I S I  L    ++I S +  S L++    P +  ++++V
Sbjct: 369 IGSDICTLGRRHIFIASRHATSLLLEWAPIPLSATTHIDV 408


>gi|70954357|ref|XP_746229.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526771|emb|CAH77136.1| hypothetical protein PC000016.02.0 [Plasmodium chabaudi chabaudi]
          Length = 372

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/361 (20%), Positives = 153/361 (42%), Gaps = 41/361 (11%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG-RIL 804
            +++++    + I    L+  E   S+ +C       +     T   L   N P+   R+ 
Sbjct: 26   IKIINPINLQVIDKVSLELEEAALSVCACELEALHCLIVGTTTNMTLKNRNVPSASLRVY 85

Query: 805  VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 864
             + + + KL L+     +   Y    FNG+++ ++  K+++Y       G ++L  +C +
Sbjct: 86   TYDI-NYKLNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYAL-----GKKKLLKKCEY 139

Query: 865  HGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
                 A+  ++  GD I   D+ +S+ +  Y   +  I   + D    W++  EILD   
Sbjct: 140  KDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHT 199

Query: 924  YLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGEFVN 964
             + A+   ++F +R   E A  EE G                   ++E +  +H+GE V 
Sbjct: 200  IMAADKFDSVFILRVPEE-AKQEEYGIANKCWYGGEVISSSTKNRKMEHIMSFHIGEIVT 258

Query: 965  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVIKGV 1023
              +   L    P S       +I+ T+ G IG      +++ L L + L+  LR     +
Sbjct: 259  SLQKVKLS---PASS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKHAL 311

Query: 1024 GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 1083
             G  H  +RS+ +       ++ +DGDL E F  L      +++  +  + +E+ +++E+
Sbjct: 312  CGREHIFFRSYYHP-----VQHVIDGDLCEQFSSLPFDVQRKVASDLEKTPDEILRKLED 366

Query: 1084 L 1084
            +
Sbjct: 367  I 367


>gi|428186188|gb|EKX55039.1| hypothetical protein GUITHDRAFT_160593 [Guillardia theta CCMP2712]
          Length = 2290

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 150/376 (39%), Gaps = 52/376 (13%)

Query: 742  EMHFVRLLDDQTFEFISTYPLDTFEYGCSIL--------SCSFSDDSNVYYCVGTAYVLP 793
            E + V+L    + E + +Y  D F  G   L        +    D    +  VGT +   
Sbjct: 1209 EKYEVQLRAPYSMELLDSYEFD-FANGEKALCLQVVHLKNTRVKDSLLPFVAVGTGFQNG 1267

Query: 794  E-ENEPTKGRILVFIVE--------DGKLQLIAEK--------ETKGAVYSLNAFNGKLL 836
            E E     GRI VF V         +G+     +K        + K  V +L    G LL
Sbjct: 1268 ESETSRATGRIYVFEVTTVVGEEGYEGRTSFKIKKIFTSADIQDIKAPVSALCQLEGYLL 1327

Query: 837  AAIN--------QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 888
             A           K+ +Y+W+       +L        H+    ++T   FIV GD+  S
Sbjct: 1328 VAQGPNPGMIGGSKLYVYEWV-----DEKLVGRAFFDAHLYITTLKTVKFFIVFGDIRHS 1382

Query: 889  ISLLIYKHEEGAIEERARDYNANWMSAVE--ILDDDIYLGA---ENNFNLFTVRKNSEGA 943
            + LL ++ +   ++  A+D     + A E  ++  +  L A   + N  +F    NS   
Sbjct: 1383 VHLLRWREDIRMLQLLAKDALPLSVYAAEFVVMGSNFGLLASDEQKNVQVFVFNPNS--- 1439

Query: 944  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH 1003
             +  R +L    + H+G  +N+F    L  R     +G      + T++G IG I  +P 
Sbjct: 1440 PEYRRQQLICRADLHVGSHINKFIRWPLPFR---PTLGVRTAAHYTTLDGGIGAIIPIPE 1496

Query: 1004 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE--KKTVDAKNFLDGDLIESFLDLSRT 1061
            + Y  L  LQ  L   +    GLN   WR +      K   AKNFLDG+L+  +L L   
Sbjct: 1497 QSYRRLLALQNLLVTAMPHYAGLNPRSWRLYKPAMCMKRRYAKNFLDGNLLGRYLHLDLA 1556

Query: 1062 RMDEISKTMNVSVEEL 1077
               ++S  +N + E +
Sbjct: 1557 LQMQLSSALNQTREAI 1572


>gi|395324102|gb|EJF56549.1| hypothetical protein DICSQDRAFT_93527 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1433

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 215/511 (42%), Gaps = 57/511 (11%)

Query: 617  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK---KLLYSNVNLKEVSHM 673
            L ++K++S    P        +  + VF   DRP+ I S++K   ++  S  N+      
Sbjct: 923  LAEQKRISRLLLPFVTSPAPGQTYSGVFFTGDRPSWIVSTDKGGVRVFPSGHNVVHAFTT 982

Query: 674  CPFNSAAFPDSLAIAKEGELTIGTIDDI---QKLHIRSIPLGE-HPRRICHQEQSRTFAI 729
            C    +   D L  ++EG   +  + DI     L  RS+P    +   +     S   A 
Sbjct: 983  CSLWESRG-DFLLYSEEGPSLVEWMPDIILDAHLPARSVPRSRPYSHVVFDASSSLIVAA 1041

Query: 730  CSLKNQSCAEESEMHFVRLLDD----------QTFEFIST---YPLDTFEYGCS-ILSC- 774
             S  N+  + + + + V   D            T E IS      +D +E+  +  +SC 
Sbjct: 1042 SSFMNRFASYDEDGNIVWEPDSPNISFPHCETSTLELISPDGWITMDGYEFAANEFVSCV 1101

Query: 775  ------SFSDDSNV--YYCVGTAYVLPEENEPTKGRILVF----IVEDG--------KLQ 814
                  + S +S +  +  VGT  +   E+   KG + +F    +V D         +L+
Sbjct: 1102 VSVPLETVSTESGMKDFIAVGTT-INRGEDLAVKGAVYIFEIVEVVPDASLNIKRWWRLK 1160

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 874
            L+   + KG V  L   NG L++++ QKI +  + L +        + G    +    ++
Sbjct: 1161 LLCRDDAKGPVSFLCGMNGYLVSSMGQKIFVRAFDLDERLVGVAFLDVG----VYVTSLR 1216

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
               + +V+GD +KS+  + ++ +   +    +D +   ++  ++   D +L         
Sbjct: 1217 AVKNLLVIGDAVKSVWFVAFQEDPYKLVILGKDPHHCCVTRADLFFADGHLSIVTCDEEG 1276

Query: 935  TVRKNSEGATD-EERGRLEVV--GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--VIFG 989
             VR  +    D E +G   ++   E+H G+    +R   LV R P +   +IP   +I G
Sbjct: 1277 VVRLYAYDPHDPESKGGQHLLRRTEFH-GQ--TEYRSSLLVARRPKAGDPEIPQARLICG 1333

Query: 990  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD-AKNFLD 1048
            +V+G +  +  +    +  L  LQ  L + ++ V  LN + +R   NE  +   +K  LD
Sbjct: 1334 SVDGSLTTLTYVDENAFKRLHLLQGQLIRTVQHVAALNPKAFRMVRNEYVSRPLSKGVLD 1393

Query: 1049 GDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
            G+L+ +F DL   R +E+++ +      + K
Sbjct: 1394 GNLLATFEDLPIGRQNEVTRQIGTDRATVLK 1424


>gi|146094112|ref|XP_001467167.1| putative CPSF-domain protein [Leishmania infantum JPCM5]
 gi|134071531|emb|CAM70220.1| putative CPSF-domain protein [Leishmania infantum JPCM5]
          Length = 1347

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 188/474 (39%), Gaps = 101/474 (21%)

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE-----ESEM 743
            ++G L IG+++ ++K     +PLGE   ++ H+  +    + S++     E      S +
Sbjct: 798  QDGRLHIGSLEALEKTSRTFLPLGETITQL-HEAAAWGGYVASVRKVEGDEVLFLPSSAI 856

Query: 744  HF-------------VRLLDDQTFEFISTYPLDTFEYGCS------ILSCSFSDDSNV-- 782
             F             V LL+++   F+ T  LD  E G        ++    SD + V  
Sbjct: 857  QFPWAADLSLWRSAAVPLLENERCVFLETVRLDGAEGGGVGERGGDLIDVPASDGAAVSE 916

Query: 783  -----YYCVGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYSLNA--- 830
                    +G+++  P+E     GRI    + +     +L LIA K+  GA+    A   
Sbjct: 917  EEWQHLLLIGSSFTFPDEQRARSGRITWCTLREERQRQRLHLIASKDIGGALQCCAAVPH 976

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVG-DLM 886
            + G++   +N  + LY+W   +D T   +  C        ++ LY  +    ++V  D+ 
Sbjct: 977  YKGRIALGVNGCVCLYQWN-TEDQTFVAEERCRVGLTVTKLIPLYHTSLAASVLVALDVR 1035

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--------NFNLFTV-- 936
             S   +     +G ++   RD +        I+D  +   AEN        NF    V  
Sbjct: 1036 HSAFFIEVDTLQGNLKVLCRDADLRG-----IMDGHVGSDAENLCLFDDSLNFTALKVVP 1090

Query: 937  -------RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLP---DSDVGQ 982
                      +  A    + R EV  + HLG+ V   R GS     +M  P    S   Q
Sbjct: 1091 LPVEARDGDAAAAARATAQYRFEVRAQCHLGDLVTCVRQGSFAATSLMEAPAHCSSAQNQ 1150

Query: 983  I-------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--- 1032
            +       P ++F T +G  GV+  +    YL L  L+ +L + +  VGGL+H+ +R   
Sbjct: 1151 LLLPGIAGPQLVFATAHGGFGVVTPVHAATYLVLRALEASLVRTVPPVGGLSHQAFREVL 1210

Query: 1033 -----------------SFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISK 1068
                             +   E+ +  +  N +DGD++E F+ LS +    + +
Sbjct: 1211 RAGQERGVSYLASKTGCALTRERLRRYEPLNTVDGDVVEQFVLLSPSDKKHVCR 1264


>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 1168

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 236/1181 (19%), Positives = 464/1181 (39%), Gaps = 195/1181 (16%)

Query: 2    SIWNYVVTAHKPTNVTHSCVGNF-----TSPQELNLIIAKCTRIEIHLLTPQ--GLQPML 54
            SI+ Y +T   P+    S VG F     ++     L++   T +++  +  +   L+   
Sbjct: 35   SIYLYNLTLKPPSYYISSIVGQFYKQDNSTKNAQQLVLVSSTTLQLFEINEETGKLELQS 94

Query: 55   DVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRP 114
               + G I ++E  +      D + I ++     +LQ+D ++ + I++    ++      
Sbjct: 95   SQNLLGIINSIE--KICLSEVDGVVITSDSGNLSILQYDNKTKKFISKIQEPMTKNGWGR 152

Query: 115  TDNGQIGIIDPD--CRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKF---- 168
               G+   IDP+  C L+     + LF  I  ++ G  + +  +     QVL +K     
Sbjct: 153  NYVGENLAIDPENRCILVAAMEKNKLFYKIESNSSGSKELSSPLEAHSKQVLCLKIVALN 212

Query: 169  ------LYGC-----AKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNN--LDNG 215
                  L+G       K  I+  Y+ ++   HV      +K K     P S N+  L N 
Sbjct: 213  TDHNNPLFGALELTPEKKCIINYYELDQGLNHV------VKKK-----PNSSNSDPLPND 261

Query: 216  ADLLIPVPPPLCGVLIIGEETIVYCSANA---FKAIPIRPSITKAYGRVD-----ADGSR 267
             + LIP+P  + G+++ G     Y   +    +  +P R   T+    V+         +
Sbjct: 262  VNYLIPLPGHIGGMVVCGTNWCFYDKLDGPRIYLPLPRRNGQTQDSIIVNHVTHVLKKKK 321

Query: 268  Y--LLGDHAGLLHLLVITHE--KEKVTGLKIELLGETSIASTISYLDNAVVY-------- 315
            +  LL +  G L  L + ++  KE +  + I        A +++   N  ++        
Sbjct: 322  FFILLQNALGDLFKLTVDYDFDKEIIKNISITYFDTIPPALSLNIFKNGFLFANVLNNDK 381

Query: 316  -------IGSSYGDSQLI-------KLNLQPDAKGSY----------VEVLERYVNLGPI 351
                   +G    + +L+        LN   ++  S+          ++VLE    L PI
Sbjct: 382  LLYQFEKLGDDLTEGELVINSSDYESLNSVRESVTSFKLKGLDNLALIDVLE---TLSPI 438

Query: 352  VDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ-GIKGMWSLRSSTD 410
             D  ++D       ++VT S       ++ + +G+         L      +++ + S +
Sbjct: 439  TDSKIID------SKLVTLSSH---SYVKSITHGVPTTTLVESPLPITPTDIFTTKLSLE 489

Query: 411  DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS-- 468
               D +LV+S    ++ L +++ + +E+ E   F     T+         +VQ+ S    
Sbjct: 490  SANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASVVQIYSNGIK 549

Query: 469  -VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 527
             VR+V+   +    +W  P G ++  AT N  QVL+A     +VY EI D    ++   Q
Sbjct: 550  HVRMVNGNKK--TTDWFPPAGITITHATTNNQQVLIALSNLSVVYFEI-DATDDQLIEYQ 606

Query: 528  LEYEI-SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIP 582
               EI + +    I EN S     A+   +D ++++ SL + N +  + L          
Sbjct: 607  DRLEIATTITAMAIQENISEKSPFAIIGCSDETIQVVSLQEHNCLEIKSLQALSANSSSL 666

Query: 583  RSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT--FSSKNT 640
            + +     E  +++   + +G      ++   G L++ +   +G++P++L    FSS+  
Sbjct: 667  KMLKSSGKE--THVHIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLSVIKFSSE-I 723

Query: 641  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF-PDSLAIAKEGELTIGTI- 698
              + A S  P + Y        + +   ++++   F S     + +   K+  L I ++ 
Sbjct: 724  EGILAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDNNLIIFSVG 783

Query: 699  ------DDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-----------CSLKNQSCAEES 741
                  D  Q L I +  L   PR++     +R F             C++         
Sbjct: 784  KEDSVFDPSQDLTIVTTKLRYTPRKMI-TYGNRLFISESEYNVQGPFKCNINGDVKENVD 842

Query: 742  EMHF---------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN----- 781
            E ++               ++++D ++ + I +  LD  E   S+ + SF+  S      
Sbjct: 843  EDYYGAFGYEWKQNSWASCIQVVDSKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPA 902

Query: 782  VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAA 838
             +  VG      +LP  N   K  +  F +    LQL+ + E       L  F  KLL A
Sbjct: 903  SHLVVGVCTNQTILP--NSYDKSYLYTFKIGKKHLQLVHKTELDHIPQVLENFQDKLLVA 960

Query: 839  INQKIQLYKWMLRDDGTRELQSEC----GHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
                I+LY     D G ++L  +         +I  +  QT  + I++ D  KS S++  
Sbjct: 961  SGNHIRLY-----DIGQKQLLKKSTTIIDFSTNINKIIPQT--NRIIICDSHKS-SIVFA 1012

Query: 895  KHEEGAIE--ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--------------- 937
            K +E   +    A D     ++++  LD D  +G +   N+F  R               
Sbjct: 1013 KFDESQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTI 1072

Query: 938  -KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 996
             K  +G  +    +L+ + E+H+G+ +  F  G L       ++    +VI+  + G IG
Sbjct: 1073 LKTQDGILNSCPYKLQNLIEFHIGDIITSFNLGCL-------NLAGTESVIYTGLQGTIG 1125

Query: 997  VIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNN 1036
            ++  L  +  +  L  LQ  +++    + G +H + RS+ N
Sbjct: 1126 LLIPLVSKSEVELLFNLQLYMQQSQNNLVGKDHLKLRSYYN 1166


>gi|440294229|gb|ELP87246.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
          Length = 1168

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 159/778 (20%), Positives = 313/778 (40%), Gaps = 91/778 (11%)

Query: 360  ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLV 418
            +++   + +  +G      ++++++ +   E A + L  I  G++ L+ S D     +LV
Sbjct: 431  DKKTANKYILYTGRGPSSCVQVLKHQMKTLEVAEITLPAIAMGVYPLQRSKD--VSEYLV 488

Query: 419  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 478
            V F + T IL ++ EDE++ET+       + ++          VQV    + + +S  +E
Sbjct: 489  VPFANATSILKIS-EDEVKETDETPVILSSYSVRIGMMPDGTFVQVLKEKIVVYTSKIKE 547

Query: 479  LRNEWKSPPGYSVNVATANASQVLLATGGGH--LVYLEIGDGILTEVKHAQLEYEISCLD 536
            +     S  G  V  A   +  V+  + G    ++  +  DG L E++      +I  + 
Sbjct: 548  V-----SVVGDIVCAAIVESFVVVGVSKGDDNVIMLFKYEDGGLHEIESKGSFGKIRSVT 602

Query: 537  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG------EIIPRSVLLCAF 590
            I    EN    +  AV    D  +RI +L   N  T + L        E     V     
Sbjct: 603  I----ENKEVPKFCAVA-CEDGGIRILTL--FNTETTKALTRVSVISLESAINDVKFGVL 655

Query: 591  EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL-RTFSSKNTTH--VFAAS 647
                 ++  L DG L     +  +GE+ +     +G Q + L R +++  +    +   +
Sbjct: 656  NSKQIIVAGLDDGKLAWCFFDSNSGEIEETNFEFVGVQNVNLGRVYTTSESGEEWMVGYN 715

Query: 648  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHI 706
                ++ +SN ++  + ++   +  +  F ++   + +A+     L I   ++    L  
Sbjct: 716  GNGILLSTSNGQIKSTPLDQPNIYGVEGFKASFVDNPIALVSGNILKILVFENTTSSLSG 775

Query: 707  RSIPLGEHPRRICHQEQSR-TFAICSLKNQSCAEESEMH---------FVRLLDDQT-FE 755
              +PL   PR+I   E    TF +C+      A +  +            R+  + T  E
Sbjct: 776  VKVPLCMTPRKIVESETVEDTFVLCADNFSKYANDEIIRGDDGEWVSSIYRMDKEATKIE 835

Query: 756  FISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN-EPTKGRILVFIVEDGKLQ 814
             ++ +P + +    ++L+ S S    +Y  VG A        + T   I V+ V    +Q
Sbjct: 836  LVTKFPQNVYALCGTLLTVSDS----IYLVVGLAEKYTSRPIKFTNSSIAVYKVNVDNIQ 891

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILA 870
             +   +T+  V S+  + G++L  IN+++++Y    K +LR    R+L SE     H++ 
Sbjct: 892  YLYTTQTEYPVRSMAVYGGRVLCGINRQLRMYEIGKKQLLRKAELRQLASEISDI-HVIN 950

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA--- 927
              +Q  G       +   IS + +   +   +  A D    W      L    Y+G+   
Sbjct: 951  NKIQLVG-------ISDGISFVRFNQTKQEFDIYA-DTLPRWTVKSVALTPTSYIGSDKF 1002

Query: 928  -------------ENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 973
                         EN  N+F+ +    +   +  + +   + E++LG+    F +  + +
Sbjct: 1003 GQIFVEGLDKETEENASNIFSSILSGEKTIYNGAKYKAVSLNEFYLGDIATGFVNCCVRI 1062

Query: 974  RLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY---LFLEKLQTNLRKVIKGVGGLNHEQ 1030
              P          IF   + + G+ A +P   +    F E+L+ ++R   + V G +H  
Sbjct: 1063 GAPQ---------IFIVSHLLGGISALIPLNGFGEIEFFEQLEMHMRVRHQNVNGRDHIA 1113

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 1088
            +RS       V  K   DGDL E F  L+     EI+  M   V E+ K++ +L  + 
Sbjct: 1114 YRS-----SVVPVKGIFDGDLCELFEKLTEEEKKEIAGEMEREVGEIVKKLHDLRNMR 1166



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 8   VTAHKPTNVTHSCVGNFTSPQELNLIIAKC-TRIEIHLLTPQGLQPMLDVPIYGRIATLE 66
           +T  + + VT SC G+F+    + L++ +  T ++I+ ++   ++ +   P +  I  + 
Sbjct: 6   LTLEENSTVTSSCFGDFSGTNSIELVLIRAQTLLQIYRISEDSIELLTQTPTFSLIRAIS 65

Query: 67  LFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIG-RPTDNGQIGIIDP 125
             +   E +D++ + ++    C+L +DA ++ L T    ++  + G R    GQ  + DP
Sbjct: 66  TIKIGNEGKDYILLGSDSGSVCLLSYDAHTNSLKT-IHNEIFGKSGIRRVVPGQYIVADP 124

Query: 126 DCRLI 130
             R +
Sbjct: 125 SGRAV 129


>gi|312069702|ref|XP_003137805.1| hypothetical protein LOAG_02219 [Loa loa]
          Length = 1065

 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 146/310 (47%), Gaps = 33/310 (10%)

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PE  +PT            +++ + +KE KG V SL + NG LL  + QK+  + W+ +D
Sbjct: 770  PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKD 818

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
            +  + + S    H ++  L +  R +  +  D+ +S++LL Y+ E  A+   +RD  ++ 
Sbjct: 819  NNLQGI-SFLDMHFYVHQL-IGVR-NLALACDMYRSVALLRYQEEYKALSLASRDMRSDV 875

Query: 913  ---MSAVEILDDD----IYLGAENNFNLFTVRKNSEGATDEERG--RLEVVGEYHLGEFV 963
               M+A  I+D+     +      N  +F    N    T E  G  +L +  E ++G  V
Sbjct: 876  QPPMAAQFIIDNKQMGFVMSDEAANIAIF----NYLPETLESLGGEKLTLRAEINIGTVV 931

Query: 964  NRF--RHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            N F    G +     ++++  +   +V+F +++G  G +  L  + +  L  LQ  +  +
Sbjct: 932  NSFIRVKGHISSGFVENELFSLERQSVLFASLDGSFGFLRPLTEKVFRRLHMLQQLMSSM 991

Query: 1020 IKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 1077
            +    GLN +  R+    +    ++ +N +DGD++  +L LS    +++++ +  S   +
Sbjct: 992  VPQPAGLNAKGARAARPPRPNHYLNTRNLVDGDMVMQYLHLSLPEKNDLARKLGTSRYHI 1051

Query: 1078 CKRVEELTRL 1087
               + E+ R+
Sbjct: 1052 IDDLIEICRV 1061


>gi|209881602|ref|XP_002142239.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
 gi|209557845|gb|EEA07890.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
          Length = 1509

 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 108/536 (20%), Positives = 204/536 (38%), Gaps = 145/536 (27%)

Query: 693  LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS------LKNQSCAEE------ 740
            L   +ID +Q+ H RS+ L   P RIC+      + +        +KN     +      
Sbjct: 971  LRASSIDILQQYHCRSLQLNFTPERICYISNLNVYVVVGIWEKGLMKNSKSENKFLIQNN 1030

Query: 741  ----SEMHFVR------------LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 784
                S + FV+            +L  +T E  S YP    EY    ++ +  + S  + 
Sbjct: 1031 STLKSSLSFVQALMCVISANNLEILHFKTLES-SVYP-TCLEYIELNINQTPENISESFI 1088

Query: 785  CVGTAYV---------LPEENEPTKGRILVFIVEDGKLQLIAEKET----KGAVYSLNAF 831
             +GT  V          P  + P  G++ +F +     + I ++ET    +G  Y++  F
Sbjct: 1089 VLGTNKVGHINDYSNKSPNIDLPI-GKLTLFSIRKLHSKFIVDEETSINAEGCPYAITRF 1147

Query: 832  N-GKLLAAINQKIQLYKWMLRDDGTRELQSEC---------------------------- 862
              G +L A+   +  Y+ +     +  L+                               
Sbjct: 1148 QLGTILVAVENSVVTYEIIQYSTSSNYLKDTSILPSSSSSSSSCLLLDTLPENEKTPKFK 1207

Query: 863  -----GHHGHILALYVQTRGD-FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 916
                  +  H + ++++   D +++VGDLM+S+ L  Y       EE  RD +  W+   
Sbjct: 1208 FNKINSYSTHTMIVFLKLWKDEYLLVGDLMRSVGLWKYDKVAKQFEEICRDPSLAWVMDG 1267

Query: 917  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 976
              ++ ++Y+ ++ N N+  + K      DE    L+ +  +H GE V+ F+ G L+M  P
Sbjct: 1268 IFINKNLYMVSDENKNVRILTKPENPINDEMDTVLQSIAHFHSGEIVSTFQKGKLMMPYP 1327

Query: 977  D--SDVGQI----------PTVIFGTVNGVIGVIASLPHEQYLFLE----------KLQT 1014
                ++  I            ++FGT  G + VI SL  +  +FL+           ++ 
Sbjct: 1328 RCLQEINNIGLDFCHSLYSEQIVFGTAQGSMSVIFSLNADYKMFLQLIMFEEAIIAAIKK 1387

Query: 1015 NLRKVIKG--------------------------VGGLNHE-----QW------RSFNNE 1037
            +LR + K                           +G +  E     QW      + +N E
Sbjct: 1388 SLRTIYKDCKVCNLSIKQIKQLYIKESSSSFSGVIGTIGGEDVTPFQWNLSKNYQDYNYE 1447

Query: 1038 KKTVDA-KNFLDGDLIESFLDLSRTRMDEISKTM------NVSVEELCKRVEELTR 1086
             +   A + F+ GD+IE FL  S    + + + +      N+++ E  K++E + +
Sbjct: 1448 YECSGASRGFISGDIIELFLKFSNELQEMVIQELKAIQIDNITIPETSKQLEHIIQ 1503



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 106/477 (22%), Positives = 198/477 (41%), Gaps = 95/477 (19%)

Query: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIH------LLTPQGLQP-- 52
           MS +NYVVT +   ++T +   +        LI+ K   + I+      L+ P  L+   
Sbjct: 1   MSQYNYVVTVYDSNSITGAIYADLFGDGIDRLILVKPKSLLIYDINKGDLIIPNNLESNE 60

Query: 53  MLDVPI---------YGRIATLELFRPHGEAQDFLFIATERYKFCVLQW---------DA 94
           + D+PI         Y  I  +  +RP G+  D + I TE+Y+  +++            
Sbjct: 61  VSDIPILRLVGEISTYKNIIQIAPWRPKGQEFDDILIYTEQYELILIRAYKLQNIEDNST 120

Query: 95  ESSELITRAMGDVSDRIGRPT---DNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK 151
           +SS L    +   S  + RP     N    IID   + I L +Y+G  +V+       LK
Sbjct: 121 DSSVLYLNVIQ--SKDLFRPNLRKSNNIKMIIDSYIQRIILLIYEGCLQVVDCYTDLSLK 178

Query: 152 EA-----FNIRLEELQVLDIKFLYGCAKPTIV-VLYQD--NKDARHVKTYEVALKDKDF- 202
            +       +RL EL +LD+  +   +   ++ +LY    ++D R +K  ++    K + 
Sbjct: 179 MSVFTPPIMLRLSELNILDLCLINSSSNKCLLGILYDSGYSEDPRLLKLIDLPSDLKSWT 238

Query: 203 ------VEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS--------------- 241
                 ++ P +   + N  D      P   G+L+ G+ ++ Y +               
Sbjct: 239 YNMRIGMKIPSNIMKIVNYEDF--NNDPLSNGLLLFGDGSVFYLTIGEILYNNNENLISQ 296

Query: 242 ---------ANAFKAIP---IRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKE-K 288
                    +N  + +      P+I  A   +D    R+L+ D+ G L ++V+  ++  K
Sbjct: 297 PLFIQCNFPSNYLEKVESGLTLPNIVDAIP-IDGKLKRWLVLDNTGGLFIMVVYKDQNLK 355

Query: 289 VTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL------------NLQPDAKG 336
           +  +K+++LG+ S  S +  L N + +IGS   DS ++ +            N+ P    
Sbjct: 356 IENIKVDILGQYSPFSVLLSLKNDIYFIGSKICDSLVLYIYHNKPLIMQIIHNIGPIRDL 415

Query: 337 SYV---EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
            ++   E  E  VN  P+ +     + +     +V   G    GS +I+ NGIG+N+
Sbjct: 416 LFIRDNEYREDIVNENPLSN---TQISKNLSLPLVAACGFGNSGSFKIICNGIGLNQ 469


>gi|398019848|ref|XP_003863088.1| CPSF-domain protein, putative [Leishmania donovani]
 gi|322501319|emb|CBZ36398.1| CPSF-domain protein, putative [Leishmania donovani]
          Length = 1347

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 187/474 (39%), Gaps = 101/474 (21%)

Query: 689  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE-----ESEM 743
            ++G L IG+++ ++K     +PLGE   ++ H+  +    + S++     E      S +
Sbjct: 798  QDGRLHIGSLEALEKTSRTFLPLGETITQL-HEAAAWGGYVASVRKVEGDEVLFLPSSAI 856

Query: 744  HF-------------VRLLDDQTFEFISTYPLDTFEYGCSI------LSCSFSDDSNV-- 782
             F             V LL+++   F+ T  LD  E G         +    SD + V  
Sbjct: 857  QFPWAADLSLWRSAAVPLLENERCVFLETVRLDGAEGGGVGERGGDPIDVPASDGAGVSE 916

Query: 783  -----YYCVGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYSLNA--- 830
                    +G+++  P+E     GRI    + +     +L LIA K+  GA+    A   
Sbjct: 917  EEWQHLLLIGSSFTFPDEQRARSGRITWCTLREERQRQRLHLIASKDIGGALQCCAAVPH 976

Query: 831  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVG-DLM 886
            + G++   +N  + LY+W   +D T   +  C        ++ LY  +    ++V  D+ 
Sbjct: 977  YKGRIALGVNGCVCLYQWN-TEDQTFVAEERCRVGLTVTKLIPLYHTSLAASVLVALDVR 1035

Query: 887  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--------NFNLFTV-- 936
             S   +     +G ++   RD +        I+D  +   AEN        NF    V  
Sbjct: 1036 HSAFFIEVDTLQGNLKVLCRDADLRG-----IMDGHVGSDAENLCLFDDSLNFTALKVVP 1090

Query: 937  -------RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLP---DSDVGQ 982
                      +  A    + R EV  + HLG+ V   R GS     +M  P    S   Q
Sbjct: 1091 LPVEARDGDAAAAARATAQYRFEVRAQCHLGDLVTCVRQGSFAATSLMEAPAHCSSAQNQ 1150

Query: 983  I-------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--- 1032
            +       P ++F T +G  GV+  +    YL L  L+ +L + +  VGGL+H+ +R   
Sbjct: 1151 LLLPGIAGPQLVFATAHGGFGVVTPVHAATYLVLRALEASLVRTVPPVGGLSHQAFREVL 1210

Query: 1033 -----------------SFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISK 1068
                             +   E+ +  +  N +DGD++E F+ LS +    + +
Sbjct: 1211 RAGQERGVSYLASKTGCALTRERLRRYEPLNTVDGDVVEQFVLLSPSDKKHVCR 1264


>gi|441648592|ref|XP_004093268.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Nomascus leucogenys]
          Length = 1177

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 12/234 (5%)

Query: 866  GHILALYVQTR--GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923
             H +A +V+++   +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 940  AHYVAYHVESKVCPNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 999

Query: 924  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 976
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1000 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1059

Query: 977  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 1035
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1060 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1119

Query: 1036 NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1120 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1173



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 113/555 (20%), Positives = 229/555 (41%), Gaps = 97/555 (17%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  S   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
                  +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV++    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL--NLQPDAKGSYVEVL--ERYVNLGPI 351
               + + +++  ++   +++GS  G+S L+K    LQ     +  E    E   +    
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKR 423

Query: 352 VDFCVVDLERQGQG----QVVTC---SGAYKDGSLRIVRNGIGINEQASVELQGIKGMWS 404
           VD   V    +GQ     QVVT     G Y    +  V   +   E+ + + +G +   S
Sbjct: 424 VD-ATVGWSGEGQKSIRPQVVTTFELPGCY---DMWTVIAPVRKEEEDNPKGEGTEQEPS 479

Query: 405 LRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LV 462
              + DD     FL++S    T IL      E+ E +  GF +Q  T+F  +   N+ +V
Sbjct: 480 TPEADDDCRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIV 537

Query: 463 QVTSGSVRLVSSTSR 477
           QV+   +RL+   ++
Sbjct: 538 QVSPLGIRLLEGVNQ 552


>gi|384253955|gb|EIE27429.1| hypothetical protein COCSUDRAFT_64224 [Coccomyxa subellipsoidea
            C-169]
          Length = 1137

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 210/527 (39%), Gaps = 104/527 (19%)

Query: 643  VFAASDRPTVIYSSNKKLLYSNVNLK-EVSHMCPFNSAAFPDSLAIA----KEGE----- 692
            +F + +RP  + +S   L+   ++++  VS M PF++   P     A     +GE     
Sbjct: 623  MFVSGERPLWLVASRGTLVAHAMDVEGRVSGMTPFHNINCPLGFITACMAENDGETLKIC 682

Query: 693  -LTIGTIDD----IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------NQSCAEES 741
             L + T  D    +QK+ +R+ P      R+ +  ++R + +   +      +Q  A + 
Sbjct: 683  QLPMRTRLDTPWPLQKIAVRATP-----HRLAYYAEARLYVLLVSRPVPYREHQEEASDG 737

Query: 742  EMHF---------------------VRLLDDQTFEFISTYPLDTFEYGCSI----LSCSF 776
            + H                      VRLL+   ++ ++ + LD  E  CS+    L  + 
Sbjct: 738  DPHASYSYICADAAAKASGTELGGEVRLLEPGRYQTVARHALDPGEEPCSVAADWLRNAQ 797

Query: 777  SDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE--------------DGKLQLIAEKETK 822
            +     Y  VGTA     E+ P  GRIL+F                   +L L+      
Sbjct: 798  TGALEPYITVGTALNY-GEDYPCSGRILLFKATRTSTSGAEQADPTISWQLTLVHASGFS 856

Query: 823  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 882
              V  L   +G+L+AA+   +Q+ +  LR      L      H  +    V T   FI++
Sbjct: 857  RPVQGLAVMDGRLVAAVGNNMQVME--LRGS---SLHMISFFHAQLFITSVATIKTFILL 911

Query: 883  GDLMKSISLLIYKHEEG---AIEERARDYNANWMSAVEILDDDIYL-----GAENNFNLF 934
            GD+ K ++  +Y  ++    A+ + ++DYN   + A E L +   L      A  N  LF
Sbjct: 912  GDVHKGLT-FVYADKKANYTALTQLSKDYNDVDVEAAEFLVNGKKLFLLACDAAQNLRLF 970

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL-PDSDVG-QIPTVIFGTVN 992
                  E     +  +L  +G  H+G+ +      SL  R+ P S  G Q+   +FG+  
Sbjct: 971  AYDGGKEQQATWQGKKLLPLGAIHVGQNIC----SSLSHRITPASATGVQLRAAVFGSAA 1026

Query: 993  GVIGVIA----SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNEKKTVDAKNF 1046
            G I  +A     LP E+ L    LQ  +   +  V GLN   +R    +  K     ++F
Sbjct: 1027 GSIASLAPTWDGLPAEELL---ALQREMVLAVPQVAGLNPVSFRRRYKHGVKALAGGQSF 1083

Query: 1047 ---------LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
                     LD D +  F  L  T    ++   N+S +++   + E+
Sbjct: 1084 EAPVSDDRVLDLDQLNRFQWLPLTEQVALAAKCNLSRQQVLHALREM 1130


>gi|121797760|sp|Q2TZ19.1|CFT1_ASPOR RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|83775384|dbj|BAE65504.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1393

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 40/331 (12%)

Query: 786  VGTAYVLPEENEPTKGRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK 834
            VGTA+   E+   ++G + VF V            D KL+L+ ++  KGAV +L+   G+
Sbjct: 1065 VGTAFARGEDIA-SRGCVYVFEVIKVVPDPKRPEMDRKLRLVGKEPVKGAVTALSEIGGQ 1123

Query: 835  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 894
                + Q  +     L++DG+    +      H+  +         ++ D +K +    Y
Sbjct: 1124 GFLIVAQGQKCIVRGLKEDGSLLPVAFMDVQCHVSVVKELKGTGMCIIADAVKGLWFAGY 1183

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRL 951
              E   +   A+D +   + A + L D      L A+++ NL  ++ + E        RL
Sbjct: 1184 SEEPYKMSLFAKDLDYLEVLAADFLPDGNKLFILVADSDCNLHVLQYDPEDPKSSNGDRL 1243

Query: 952  EVVGEYHLGEFVNRFRHGSLVMRLPDSDVG---------------QIP--TVIFGTVNGV 994
                ++H G F+      S +  LP + V                +IP   ++  + NG 
Sbjct: 1244 LSRSKFHTGNFI------STLTLLPRTSVSSEQMISDVDAMDVDIKIPRHQMLITSQNGS 1297

Query: 995  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 1054
            +G++  +  E Y  L  LQ+ L   I+   GLN   +R+   E      +  LDG L+  
Sbjct: 1298 VGLVTCVSEESYRRLSALQSQLTNTIEHPCGLNPRAFRAV--ESDGTAGRGMLDGKLLFQ 1355

Query: 1055 FLDLSRTRMDEISKTMNVSVEELCKRVEELT 1085
            +LD+S+ R  EI+  +  +  E+    E ++
Sbjct: 1356 WLDMSKQRKVEIASRVGANEWEIKADFEAIS 1386


>gi|156339124|ref|XP_001620088.1| hypothetical protein NEMVEDRAFT_v1g149219 [Nematostella vectensis]
 gi|156204443|gb|EDO27988.1| predicted protein [Nematostella vectensis]
          Length = 69

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 9/67 (13%)

Query: 1031 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---------SVEELCKRV 1081
            WRSF+NE+K   A  F+DGDLIESFLDL R RM+E+   + +         +V++L K V
Sbjct: 3    WRSFSNERKMEPAHGFIDGDLIESFLDLPRARMEEVVTGLQIDDGGMKKECTVDDLVKTV 62

Query: 1082 EELTRLH 1088
            EELTR+H
Sbjct: 63   EELTRIH 69


>gi|402590016|gb|EJW83947.1| hypothetical protein WUBG_05142 [Wuchereria bancrofti]
          Length = 374

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 146/310 (47%), Gaps = 33/310 (10%)

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PE  +PT            +++ + +KE KG V SL + NG LL  + QK+  + W+ +D
Sbjct: 79   PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKD 127

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
            +  + + S    H +I  L +  R +  +  D+ +S++LL Y+ E  A+   +RD  ++ 
Sbjct: 128  NNLQGI-SFLDMHFYIHQL-IGVR-NLALACDMYRSLALLRYQEEYKALSLASRDMRSDV 184

Query: 913  MS--AVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERG--RLEVVGEYHLGEFV 963
                A + L D+  +G        N  +F    N    T E  G  +L +  E ++G  V
Sbjct: 185  QPPMAAQFLIDNKQMGFIMSDEAANIAIF----NYLPETLESLGGEKLTLRAEINIGTVV 240

Query: 964  NRF--RHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
            N F    G +     ++++  +   +V+F +++G  G +  L  + +  L  LQ  +  +
Sbjct: 241  NSFIRVKGHISSGFVENELFSLERQSVLFASLDGSFGYLRPLTEKVFRRLHMLQQLMSSM 300

Query: 1020 IKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 1077
            +    GLN +  R+   ++    ++ +N +DGD++  +L LS    +++++ +  S   +
Sbjct: 301  VLQPAGLNAKGARAARPQRPNHYLNTRNLVDGDVVMQYLHLSLPEKNDLARKLGTSRYHI 360

Query: 1078 CKRVEELTRL 1087
               + E+ R+
Sbjct: 361  IDDLNEICRV 370


>gi|315045910|ref|XP_003172330.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893]
 gi|311342716|gb|EFR01919.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893]
          Length = 1397

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 177/428 (41%), Gaps = 52/428 (12%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMHF-----------------VR 747
            R IPLGE    I +   S ++ I +   +     E+ E H                  V+
Sbjct: 965  RKIPLGEQVDCIVYSSASESYVIGTSTKEDFKLPEDDESHTEWRNEFITFLPQLDRGTVK 1024

Query: 748  LLDDQTFEFISTYPLDTFE-YGC-SILSCSFSDDSNV---YYCVGTAYVLPEENEPTKGR 802
            LL+ + +  I  Y ++  E   C  I+    S+ ++       VG+A    E+  P KG 
Sbjct: 1025 LLEPKNWSAIDIYEVEPAERITCIKIIRLEISETTHERKDMVVVGSAVAKGEDIVP-KGC 1083

Query: 803  ILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
            I VF + D            KL+L A +E KGAV +++   G+    + Q  +     L+
Sbjct: 1084 IRVFEIIDVVPDPDHPEKNKKLKLFAREEVKGAVTAVSGIGGQGFLIVAQGQKCMVRGLK 1143

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 911
            +DG+    +      ++  L         ++GD  K +    Y  E   ++   ++    
Sbjct: 1144 EDGSLLPIAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFTGYSEEPYKLDLFGKENENL 1203

Query: 912  WMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR- 967
             +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +    
Sbjct: 1204 AVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMTL 1263

Query: 968  --HGSLVMRLP------DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
              HGS  +  P      D+D+   P+   V+     G IGVI+ L  + Y  L  LQ+ L
Sbjct: 1264 LPHGSHTLSSPVDEDAMDTDLPPPPSKYQVLITFQTGSIGVISPLNEDSYRRLLALQSQL 1323

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
               ++   GLN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1324 VNALEHPCGLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1382

Query: 1077 LCKRVEEL 1084
            +   +E+L
Sbjct: 1383 IRIDLEKL 1390


>gi|303321596|ref|XP_003070792.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
 gi|240110489|gb|EER28647.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
          Length = 1394

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 162/372 (43%), Gaps = 37/372 (9%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTK 800
            ++LL  +T+  + +Y L   E    + + +      + +      VGTA V  E+  P +
Sbjct: 1022 IKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITP-R 1080

Query: 801  GRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 847
            G I VF I+E          + KL++ A+ + KGAV +++   G+  L+ A  QK  +  
Sbjct: 1081 GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMAQGQKCMVRG 1140

Query: 848  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 907
              L++DG+    +      ++  L         ++GD +K I    Y  E   +    +D
Sbjct: 1141 --LKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYSEEPYRLTLFGKD 1198

Query: 908  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
                 + A + L D   +Y L A+++  +  +  + E  T  +  RL     +H+G F +
Sbjct: 1199 NEYLQVIAADFLPDGKRLYILVADDDCTIHVLEYDPEDPTSSKGDRLLHRSSFHMGHFTS 1258

Query: 965  RF----RHGSLVMR----LPDSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQ 1013
                  +H S          D DV  +P    V+  +  G IGV+  L  + Y  L  LQ
Sbjct: 1259 TMTLLPQHSSSPSADDPGEDDMDVDYVPKSYQVLVTSQEGSIGVVTPLTEDSYRRLSALQ 1318

Query: 1014 TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
            + L   ++   GLN + +R+   E      +  +DG+L+  +LD+   R  EI+  +   
Sbjct: 1319 SQLVTSMEHPCGLNPKAYRAV--ESDGFGGRGIVDGNLLLRWLDMGVQRKAEIAGRVGAD 1376

Query: 1074 VEELCKRVEELT 1085
            +E +   +E+++
Sbjct: 1377 IESIRVDLEKIS 1388


>gi|320040273|gb|EFW22206.1| hypothetical protein CPSG_00105 [Coccidioides posadasii str.
            Silveira]
          Length = 1387

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 159/370 (42%), Gaps = 33/370 (8%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTK 800
            ++LL  +T+  + +Y L   E    + + +      + +      VGTA V  E+  P +
Sbjct: 1015 IKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITP-R 1073

Query: 801  GRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 849
            G I VF I+E          + KL++ A+ + KGAV +++   G+    + Q  +     
Sbjct: 1074 GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMAQGQKCMVRG 1133

Query: 850  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            L++DG+    +      ++  L         ++GD +K I    Y  E   +    +D  
Sbjct: 1134 LKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYSEEPYRLTLFGKDNE 1193

Query: 910  ANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
               + A + L D   +Y L A+++  +  +  + E  T  +  RL     +H+G F +  
Sbjct: 1194 YLQVIAADFLPDGKRLYILVADDDCTIHVLEYDPEDPTSSKGDRLLHRSSFHMGHFTSTM 1253

Query: 967  ----RHGSLVMR----LPDSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
                +H S          D DV  +P    V+  +  G IGV+  L  + Y  L  LQ+ 
Sbjct: 1254 TLLPQHSSSPSADDPGEDDMDVDYVPKSYQVLVTSQEGSIGVVTPLTEDSYRRLSALQSQ 1313

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            L   ++   GLN + +R+   E      +  +DG+L+  +LD+   R  EI+  +   +E
Sbjct: 1314 LVTSMEHPCGLNPKAYRAV--ESDGFGGRGIVDGNLLLRWLDMGVQRKAEIAGRVGADIE 1371

Query: 1076 ELCKRVEELT 1085
             +   +E+++
Sbjct: 1372 SIRVDLEKIS 1381


>gi|68071595|ref|XP_677711.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56497932|emb|CAI04454.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 493

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 132/318 (41%), Gaps = 49/318 (15%)

Query: 693 LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQ 752
           L I  +++I + +I+ IP      +I   ++S       L   SC  E E H       Q
Sbjct: 53  LYISHLNEINETYIQKIPFYRTVEKIAFHKES------GLLITSCPPE-EKHKTNKNLKQ 105

Query: 753 TFEFISTYPLDTFEYGCSILS-------CSFSDDSNVY---------YCVGTAYVLPEEN 796
              F + Y  ++F+Y   I S       C +  + ++Y          CVGTA +    +
Sbjct: 106 IICFFNPYQ-NSFKYSYIIPSKYNVSSICIYQINKDIYPNKSNINTLICVGTANINDRVS 164

Query: 797 EPTKGRILVFIVE--DGKLQL---IAEKETKGAVYSLNAFNGKLLAAINQK--------- 842
           EP+ G I +F  +  D   ++          G +  L  F  KL++ IN           
Sbjct: 165 EPSSGNIYIFFAKKKDNLFEIKHIYTHNVNVGGITHLKQFYDKLISTINNTVVILDISDF 224

Query: 843 -IQLYKWM--------LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 893
            I L K++        L +DGT    +       I++L V    ++IVVGD+M S+++L 
Sbjct: 225 LINLDKYVDNTNKPIKLENDGTIVDVASFTPSSWIMSLDVIE--NYIVVGDIMTSVTILS 282

Query: 894 YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 953
           Y      + E  RDY+  W + V  L    +L ++   N    +K+S    DE+  +L  
Sbjct: 283 YDFNNSTLTEVCRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSSIRYNDEDSFKLSR 342

Query: 954 VGEYHLGEFVNRFRHGSL 971
           V  ++ G  VN+    SL
Sbjct: 343 VAFFNHGHVVNKMLPVSL 360


>gi|5817204|emb|CAB53699.1| hypothetical protein [Homo sapiens]
          Length = 215

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 31/220 (14%)

Query: 884  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSE 941
            D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+ 
Sbjct: 2    DVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTN 61

Query: 942  GATDEE---------RGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
               DE+         RG L       EV+  YH+GE V   +  +L+        G   +
Sbjct: 62   DEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSES 114

Query: 986  VIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 1044
            +++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+         K
Sbjct: 115  LVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVK 169

Query: 1045 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 1084
            N +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 170  NVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 209


>gi|71032257|ref|XP_765770.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352727|gb|EAN33487.1| hypothetical protein TP01_0243 [Theileria parva]
          Length = 1504

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 39/274 (14%)

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            +D+ T  +     +  +   + + T+ D I VGDLM S+ +L  K  +  + E  RD+N 
Sbjct: 1220 QDETTLFIDVVANYDSNTFVVSLDTKDDVIFVGDLMTSVKML--KFRDNRLLETCRDFNT 1277

Query: 911  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF--RH 968
             W +++  +D+   L +++  N    +K     TD++  R +  G +H GE VN+   R 
Sbjct: 1278 LWTTSLAAVDNSSCLVSDDLGNFLLFKKVQHPTTDQQSIRFDKQGLFHHGEVVNKILKRT 1337

Query: 969  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHE----------------------- 1004
               V  + +S + +     F   N V+    S  P E                       
Sbjct: 1338 QMSVQHVANSRMSRSNPREFMVSNRVVSESESNNPSETLNVNEYTNLFKSFFTCATTSGS 1397

Query: 1005 -----------QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 1053
                        +L L  L+  +  V K +G +     R+F +    +  K F+DGDL+E
Sbjct: 1398 LLQVCFFDDLNMFLKLSLLEHTMHLVQKDLGNIPSRNQRNFEDLHSNIPTKGFVDGDLVE 1457

Query: 1054 SFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 1087
            +FL L  +    + +TM ++   L  ++  L  L
Sbjct: 1458 AFLKLPDSLKKWVFETMLINSRHLGVKLSSLESL 1491


>gi|257215708|emb|CAX83006.1| Cleavage and polyadenylation specificity factor subunit 1
           [Schistosoma japonicum]
          Length = 462

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 36/213 (16%)

Query: 163 VLDIKFLYGCAKPTIVVLYQD------NKDARHVKTYEVALK---DKDFVEGPWSQNNLD 213
           VLD++FL+G  +PT++VLY+          AR      VAL     K      W Q +L 
Sbjct: 214 VLDMQFLHGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKRTNPVIWFQESLP 273

Query: 214 NGADLLIPVPPPLCGVLIIGEETIVY-------------CSANAFKAIPIRPSITKAYGR 260
                +IPVP P+ GV+I+   +I+Y             C A      P+R  +    G 
Sbjct: 274 FDCRSVIPVPQPIGGVVIMAANSILYLKQTLPSCSLPLNCYAQISTNFPMRQDVPSC-GP 332

Query: 261 VDADGSR--------YLLGDHAGLLHLLVITHEK--EKVTGLKIELLGETSIASTISYLD 310
           +  DG R        +L+G  +G L+LL +  E+  + VT L    +G       +  L+
Sbjct: 333 LSIDGCRVVTLNETQFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKVGHAVPPHCMVLLE 392

Query: 311 NAVVYIGSSYGDSQLIKLN---LQPDAKGSYVE 340
           +  ++IGS + DS L+K+N   L  DA G  V+
Sbjct: 393 SKYLFIGSRFCDSVLMKINHSLLCVDASGKEVD 425


>gi|393907594|gb|EJD74706.1| hypothetical protein LOAG_18016 [Loa loa]
          Length = 398

 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 145/306 (47%), Gaps = 25/306 (8%)

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            PE  +PT            +++ + +KE KG V SL + NG LL  + QK+  + W+ +D
Sbjct: 103  PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKD 151

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 912
            +  + + S    H ++  L +  R +  +  D+ +S++LL Y+ E  A+   +RD  ++ 
Sbjct: 152  NNLQGI-SFLDMHFYVHQL-IGVR-NLALACDMYRSVALLRYQEEYKALSLASRDMRSDV 208

Query: 913  ---MSAVEILDDDI--YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF- 966
               M+A  I+D+    ++ ++   N+       E        +L +  E ++G  VN F 
Sbjct: 209  QPPMAAQFIIDNKQMGFVMSDEAANIAIFNYLPETLESLGGEKLTLRAEINIGTVVNSFI 268

Query: 967  -RHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGV 1023
               G +     ++++  +   +V+F +++G  G +  L  + +  L  LQ  +  ++   
Sbjct: 269  RVKGHISSGFVENELFSLERQSVLFASLDGSFGFLRPLTEKVFRRLHMLQQLMSSMVPQP 328

Query: 1024 GGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 1081
             GLN +  R+    +    ++ +N +DGD++  +L LS    +++++ +  S   +   +
Sbjct: 329  AGLNAKGARAARPPRPNHYLNTRNLVDGDMVMQYLHLSLPEKNDLARKLGTSRYHIIDDL 388

Query: 1082 EELTRL 1087
             E+ R+
Sbjct: 389  IEICRV 394


>gi|148697643|gb|EDL29590.1| cleavage and polyadenylation specific factor 1, isoform CRA_b [Mus
            musculus]
          Length = 1311

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 934
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1088 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1147

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 985
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1148 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVVWENK 1201

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1202 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1261

Query: 1043 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 1262 AVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1293



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 104/551 (18%), Positives = 212/551 (38%), Gaps = 151/551 (27%)

Query: 72  GEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GDVSDRIGRPTDNGQIGIIDPD 126
           G  +D L ++ +  K  V+++D  + +L T ++      ++ D   +     ++ + DPD
Sbjct: 9   GAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRV-DPD 67

Query: 127 CRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FNIR-LEE--LQVLDI 166
            R   + +Y     V+PF       +++G + E            ++R L+E  L ++D+
Sbjct: 68  GRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFLPSYIIDVRALDEKLLNIIDL 127

Query: 167 KFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEGP----WSQNNLDNGAD 217
           +FL+G  +PT+++L++ N+      A    T  +     +  +      WS  +L     
Sbjct: 128 QFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCT 187

Query: 218 LLIPVPPPLCGVLIIGEETIVYCS-------------ANAFKAIPIRPSITKAYGRVDAD 264
             + VP P+ GV+I    +++Y +                  A P+R   T+   R+  D
Sbjct: 188 QALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLR---TQEGVRITLD 244

Query: 265 GS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDNAVVY 315
            +        + ++    G +++L +IT     V     +    + + +++  ++   ++
Sbjct: 245 CAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLF 304

Query: 316 IGSSYGDSQLIKL-----------------NLQPDAKGSYVE------------------ 340
           +GS  G+S L+K                    +P +K   VE                  
Sbjct: 305 LGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKRVEPAVGWTGGKTVPQDEVDE 364

Query: 341 --------------------VLERYVNLGPIVDFCVVD---LERQGQG------QVVTCS 371
                               V +  +N+GP  +  V +   L  + Q       ++V CS
Sbjct: 365 IEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCS 424

Query: 372 GAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------------------------RS 407
           G  K+G+L +++  I      + EL G   MW++                        ++
Sbjct: 425 GYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKA 484

Query: 408 STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTS 466
             D     FL++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQV+ 
Sbjct: 485 EEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSP 542

Query: 467 GSVRLVSSTSR 477
             +RL+   ++
Sbjct: 543 LGIRLLEGVNQ 553


>gi|194474008|ref|NP_001124043.1| cleavage and polyadenylation specificity factor subunit 1 [Rattus
            norvegicus]
 gi|149066087|gb|EDM15960.1| cleavage and polyadenylation specific factor 1, 160kDa (predicted),
            isoform CRA_a [Rattus norvegicus]
          Length = 1386

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 934
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1163 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1222

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 985
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1223 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVMWENK 1276

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1277 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1336

Query: 1043 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 1337 AVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1368



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 117/627 (18%), Positives = 242/627 (38%), Gaps = 165/627 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL--NLQ---------------PDAKGSY 338
               + + +++  ++   +++GS  G+S L+K    LQ               P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 V------------------------------------EVLERYVNLGPIVD-------FC 355
           V                                    EV +  +N+GP  +       F 
Sbjct: 424 VDPTVGWTGGKTQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPAFL 483

Query: 356 VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL---------- 405
             +   +   ++V CSG  K+G+L +++  I      + EL G   MW++          
Sbjct: 484 SEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEE 543

Query: 406 --------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTL 451
                         ++  D     FL++S    T IL      E+ E +  GF +Q  T+
Sbjct: 544 TPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPTV 601

Query: 452 FCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 FAGNIGDNRYIVQVSPLGIRLLEGVNQ 628


>gi|354491124|ref|XP_003507706.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 2 [Cricetulus griseus]
          Length = 1388

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 934
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1165 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1224

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 985
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1225 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVMWENK 1278

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1279 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1338

Query: 1043 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 1339 AVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1370



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 117/629 (18%), Positives = 243/629 (38%), Gaps = 167/629 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFAMYCNFFNNNERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEESE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL--NLQ---------------PDAKGSY 338
               + + +++  ++   +++GS  G+S L+K    LQ               P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           V+                                      V +  +N+GP  +  V +  
Sbjct: 424 VDPTAGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 359 -LERQGQGQ----VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------- 405
            L  +   +    +V CSG  K+G+L +++  I      + EL G   MW++        
Sbjct: 484 FLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEE 543

Query: 406 ----------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 449
                           ++  D     FL++S    T IL      E+ E +  GF +Q  
Sbjct: 544 EEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGP 601

Query: 450 TLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 TVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 630


>gi|148697644|gb|EDL29591.1| cleavage and polyadenylation specific factor 1, isoform CRA_c [Mus
            musculus]
          Length = 1388

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 934
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1165 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1224

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 985
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1225 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVVWENK 1278

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1279 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1338

Query: 1043 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 1339 AVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1370



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 117/629 (18%), Positives = 242/629 (38%), Gaps = 167/629 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL--NLQ---------------PDAKGSY 338
               + + +++  ++   +++GS  G+S L+K    LQ               P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVD------- 353
           VE                                      V +  +N+GP  +       
Sbjct: 424 VEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 354 FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-------- 405
           F   +   +   ++V CSG  K+G+L +++  I      + EL G   MW++        
Sbjct: 484 FLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEE 543

Query: 406 ----------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 449
                           ++  D     FL++S    T IL      E+ E +  GF +Q  
Sbjct: 544 EETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGP 601

Query: 450 TLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
           T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 TVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 630


>gi|148697642|gb|EDL29589.1| cleavage and polyadenylation specific factor 1, isoform CRA_a [Mus
            musculus]
          Length = 1417

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 934
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1194 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1253

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 985
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1254 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVVWENK 1307

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1308 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1367

Query: 1043 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 1368 AVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1399



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 117/631 (18%), Positives = 243/631 (38%), Gaps = 169/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 35  AHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 94

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 95  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 154

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 155 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 213

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 214 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 273

Query: 202 FVEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +      WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 274 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 333

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 334 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 390

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL-----------------NLQPDAKGSY 338
               + + +++  ++   +++GS  G+S L+K                    +P +K   
Sbjct: 391 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 450

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           VE                                      V +  +N+GP  +  V +  
Sbjct: 451 VEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 510

Query: 359 -LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------ 405
            L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++      
Sbjct: 511 FLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRK 570

Query: 406 ------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                             ++  D     FL++S    T IL      E+ E +  GF +Q
Sbjct: 571 EEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 628

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 629 GPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 659


>gi|114318675|gb|ABI63336.1| putative splicing factor 3b [Hordeum vulgare subsp. vulgare]
          Length = 379

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 17/274 (6%)

Query: 485 SPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGEN 543
           +P   ++    +N  QV++A  GG L+Y E+   G L EV+   +  +++CL I P+ E 
Sbjct: 1   TPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEG 60

Query: 544 PSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFE-------GISY 595
              S+  AVG + D ++RI SL PD  L           P S+L    +       G  Y
Sbjct: 61  RQRSRFLAVGSY-DNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADY 119

Query: 596 -----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 650
                L   L +G L    ++M TG+L+D +   LG +P  L      +   +   S RP
Sbjct: 120 PANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRP 179

Query: 651 TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSI 709
            + Y      L + ++   +     F+S    + +       L I TI+ + +  +  SI
Sbjct: 180 WLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETFNETSI 239

Query: 710 PLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 742
           PL   PR+     + +  A+  S K    AE+ E
Sbjct: 240 PLRYTPRKFVILPKKKYLAVIESDKGAFSAEQRE 273


>gi|302694047|ref|XP_003036702.1| hypothetical protein SCHCODRAFT_63425 [Schizophyllum commune H4-8]
 gi|300110399|gb|EFJ01800.1| hypothetical protein SCHCODRAFT_63425 [Schizophyllum commune H4-8]
          Length = 1396

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 206/508 (40%), Gaps = 82/508 (16%)

Query: 625  LGTQPITLRTF----SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 680
            L  Q   LRTF     +     VF   DRP  I +++K      V +    H   +  +A
Sbjct: 891  LAEQKKALRTFVPFACAGAPAGVFFTGDRPHWIVATDK----GGVQMYPSGHAAVYAFSA 946

Query: 681  ------FPDSLAIAKEGELTIGTIDDIQ---KLHIRSIPLGEHPRRICHQEQSRTF-AIC 730
                    + L  ++EG+     I + +    L +R IP G     I ++  S    A  
Sbjct: 947  CTLWERSTEFLIYSEEGQTLCEWITEYEIGRPLPMRHIPRGRAYSNIVYEPASSMIVAAA 1006

Query: 731  SLK----------NQSCAEES--------EMHFVRLLDDQTFEFISTYPLDTFEYGCSIL 772
            SL+          NQ  A +         E   + L+  + +  +  Y   T E+  + +
Sbjct: 1007 SLRARFASFDEDGNQIWAPDGPGITEPTVECSTLELISPEVWATVDGYEFATNEF-VNTM 1065

Query: 773  SC----SFSDDSNV--YYCVGTAYVLPEENEPTKGRILVF----IVEDG--------KLQ 814
             C    + S ++ V  +  VGT+ V   E+   KG   +F    +V D         +L+
Sbjct: 1066 ECVPLETVSTEAGVKHFIAVGTSIVR-GEDLAVKGATYIFEVVEVVPDQSNGPKRWYRLK 1124

Query: 815  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 874
            L    + KG V +L   N  L++++ QKI +  + L +        + G    +    ++
Sbjct: 1125 LRCRDDAKGPVTALCGINNYLVSSMGQKIFVRAFDLDERLVGVAFMDVG----VYVTSLR 1180

Query: 875  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 934
               + +++GD+++ I  + ++ +   +    RD +    + V+      +  AE    + 
Sbjct: 1181 ALKNLLLIGDVVRGIQFVAFQEDPYKLVTLGRDVSRMCATTVD------FFFAEEALAIV 1234

Query: 935  TVRKNS--------EGATDEERGRLEVV-GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 985
            T  +N           A D   GRL +   E++L      FR  +L+ R    D   IP 
Sbjct: 1235 TTDENGVMSMYNYDPEAPDSHDGRLLLKQTEFNLH---TDFRTSTLIARRTKDD-PIIPQ 1290

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
              +IFG  +G +  +  +P +    L+ LQ  L + ++ V GLN +  R   NE  +   
Sbjct: 1291 GILIFGGTDGTLSCLTPVPDDAAKRLQPLQLQLTRNMQHVAGLNPKALRIVRNEHVSRPL 1350

Query: 1043 AKNFLDGDLIESFLDLSRTRMDEISKTM 1070
            +K  LDG+LI  F  L  TR DE+++ +
Sbjct: 1351 SKGILDGNLIAYFEHLPITRQDEMTRQI 1378



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 116/303 (38%), Gaps = 55/303 (18%)

Query: 76  DFLFIATERYKFCVLQWDAESSELIT-------RAMGDVSDRIGRPTDNGQIGIIDPDCR 128
           D L ++ +  K  +L+W   + +L+T       RA+  V+  I   T   ++   DP  R
Sbjct: 139 DRLLVSFKDAKIALLEWSTATQDLLTVSIHTYERAIQMVATDISAFTSELRV---DPQSR 195

Query: 129 LIGLHLYDGLFKV-------------IPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKP 175
              L L    F +             +P+     L     +      V+D  FL G + P
Sbjct: 196 CAALSLPKDAFAILPPCQVSDSVCRDVPYSPSFILNLPSEVESGIRNVIDFTFLPGFSNP 255

Query: 176 TIVVLYQ-----DNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAD---LLIPVPPPLC 227
           T+ VLY+       +      T ++A    D V   +    L  G     L +   P   
Sbjct: 256 TVAVLYETYQTWTGRLNEQKDTVKMAFFTLDIVNRRYPVIGLATGLPCDCLSVLACPSTG 315

Query: 228 GVLIIGEETIVYCSANAFK---------------AIPIRPSITKAYGRVDADGSRYLLGD 272
           GV+++   +I+Y   +  K               A+P   +  +    ++ +GSR +  D
Sbjct: 316 GVMVVASNSIIYVDQSGRKVVLPVNAWIPRMSDIALPTNLTPEEQARTLELEGSRSIFVD 375

Query: 273 HA--------GLLHLLVITHEKEKVTGLKI-ELLGETSIASTISYLDNAVVYIGSSYGDS 323
                     G ++ + +      V+ L +   L +T+I S +  ++N  + +GS+ GDS
Sbjct: 376 DKTAFIILKDGTIYPVELVTAGRVVSKLALGTPLAKTTIPSILRRINNDYLLVGSASGDS 435

Query: 324 QLI 326
            L+
Sbjct: 436 ALL 438


>gi|58702050|gb|AAH90169.1| LOC564406 protein, partial [Danio rerio]
          Length = 416

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/389 (19%), Positives = 163/389 (41%), Gaps = 72/389 (18%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT------------------PQGLQ 51
           AH PT V  +   NF S QE NL++A  +++ ++ +                    + L+
Sbjct: 8   AHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGKSRKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +    ++G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    +  
Sbjct: 68  QVASFSLFGNVMSMASVQLVGTNRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 112 GRP--TDNGQIGII--DPDCRLIGLHLYDGLFKVIPF---------------DNKGQLKE 152
            R     N  I ++  DP+ R   + +Y     V+PF                 K     
Sbjct: 128 LRDGFVQNVHIPMVRVDPENRCAVMLVYGTCLVVLPFRKDTLADEQEGIVGEGQKSSFLP 187

Query: 153 AFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDF 202
           ++ I + EL      ++D+KFL+G  +PT+++L++ N+      A    T  +     + 
Sbjct: 188 SYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNI 247

Query: 203 VEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANAF 245
           ++      WS +NL    + ++ VP P+ GV++    +++Y +              N  
Sbjct: 248 MQKVHPVIWSLSNLPFDCNQVMAVPKPIGGVVVFAVNSLLYLNQSVPPFGVSLNSLTNGT 307

Query: 246 KAIPIRPSITKAYGRVDADGSRYLLGD------HAGLLHLL-VITHEKEKVTGLKIELLG 298
            A P+RP   +    +D   + ++  D        G +++L +IT     V     +   
Sbjct: 308 TAFPLRPQ-EEVKITLDCSQASFITSDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAA 366

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIK 327
            + + + +  ++   +++GS  G+S L++
Sbjct: 367 ASVLTTCMMTMEPGYLFLGSRLGNSLLLR 395


>gi|50292811|ref|XP_448838.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74608786|sp|Q6FLQ6.1|RSE1_CANGA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|49528151|emb|CAG61808.1| unnamed protein product [Candida glabrata]
          Length = 1296

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 155/349 (44%), Gaps = 58/349 (16%)

Query: 301 SIASTISYLDNAVVYIGSSYGDSQLIKLNLQP-----------DAKGSYVEVLERYVNLG 349
           S +S +   +N  +YI S +     + LN +            D +   + V+ ++ N+ 
Sbjct: 340 SNSSKLHIFNNGSMYINSQFNYDH-VYLNFESIGDNDENYDKIDNENENISVISKHTNIN 398

Query: 350 PI-VDFCVVD------LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKG 401
           PI ++ C+++      +  QG  +            + I+RN I + E  S  L QG+  
Sbjct: 399 PIALNLCLMENMPLTFMHFQGGNRTTDSE------KVNIIRNAIPLKEYVSSPLPQGVSN 452

Query: 402 MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY--- 458
           ++++++     + +F+ ++ I+ T ++      ++ +  IE +   + T    D +    
Sbjct: 453 IFTIKTQYQ-SYHSFIFLTMINFTTVIL-----KIADDSIEQYIPASDTFKLKDDMTIHV 506

Query: 459 -----NQLVQVTSGSVRLVSSTSRELRN-----EWKSPPGYSVNVATANASQVLLATGGG 508
                N ++QV     R +   S++  N     +W  P G S+  A +N SQ++LA    
Sbjct: 507 ATMGDNSIIQVCKDEFRQILLDSKDEENFKMNLKWYPPAGVSILSAVSNFSQLILALSNN 566

Query: 509 HLVYLEIGDGILTEVKH-AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD 567
            +VYL++ +  L E K+  +L   I+ L +  + +N   S+I AVG  +D  V + SL  
Sbjct: 567 EIVYLQLENNTLIEYKNRPELPDVITSLAL--LNDNTKKSEILAVGT-SDNMVNVLSLE- 622

Query: 568 LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGH-LLNFLLNMKTG 615
              I  E +  E    +V+  A + I   L  L  GH L+N  + ++ G
Sbjct: 623 ---IVDEAISFE----TVVFQALDAIPSSLLILNQGHKLVNLHIGVEDG 664


>gi|412986884|emb|CCO15310.1| predicted protein [Bathycoccus prasinos]
          Length = 1595

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 53/346 (15%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN----VYYCVGTAYVLPE-ENEPTK 800
            +RLL   T E      ++  E+   + +    D S         +GTA  +P  E+ P +
Sbjct: 1230 IRLLVPGTLETAWQKAVEPGEHILCVKNVQIRDQSTGALLSMLAIGTA--MPGGEDTPCR 1287

Query: 801  GRILVFIV-----EDGKL----QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 851
            GRIL+F +      DG +    +L  EK +K A  ++ + +G  + AI  K+  + W   
Sbjct: 1288 GRILLFAIMWERARDGGVRWRGELKCEKPSKMACSAIESVDGTFMVAIGTKLTAHSW--- 1344

Query: 852  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG--AIEERARDYN 909
             DG + L     +   +    +    +F++ GDL KSI  + +K  +G   + +  +DY 
Sbjct: 1345 -DG-KHLNPIAFYDTPLYTTTLCCVKNFLLCGDLHKSIRFVRWKDSQGEKTLSQLGKDYE 1402

Query: 910  ANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN-- 964
                 A E + D      L A+ N N    +   + A   +  +L     YH G  +   
Sbjct: 1403 VLDCIASEFMIDGGTLSLLAADANGNAHVFQYAPKLAESWKGDKLLPKSAYHAGSLIRKM 1462

Query: 965  -RFRHGSLVMRLPDSDVGQIP----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
             RF+ G          VG+       V FG+ +G +G+ + +    +L LEKLQ  +R  
Sbjct: 1463 VRFQIG----------VGEQKQNRHAVFFGSSDGGLGIFSPVDEHTFLNLEKLQDAMRSN 1512

Query: 1020 IKGVG------GLNHEQWRSFNNEKKTV----DAKNFLDGDLIESF 1055
            I          GLN + +R+  + + +V      +  +DG L+  F
Sbjct: 1513 IVASSNSINPLGLNSKTYRALKSSEGSVARQTPPRTIVDGGLLSKF 1558



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 23/147 (15%)

Query: 348 LGPIVDFCV-----VDLERQGQGQVVTCSGAYKDGSLRIVRNGIG---INEQASVELQGI 399
           + P+VD  V     V  +   + ++V   G  K+G+L I+  GI    + E  S  L G+
Sbjct: 679 ISPVVDLTVGASAPVGTDLDPRTELVAACGHGKNGALAILTRGITPELVTEVESGALPGL 738

Query: 400 KGMWSLRSSTDDP-----------FDTFLVVSFISETRILAMNLEDELEETEIE-GFCSQ 447
           +  W+ R+  D+            FD  L++S  S    + +   +EL E   E  F   
Sbjct: 739 RACWATRTEDDNDGTVRPKRKDELFDEHLILSLSSTKTTMVLETGEELREVSKEVDFIVD 798

Query: 448 TQTLFCHDAIYN--QLVQVTSGSVRLV 472
            +TL C + I+N   + QVT   +R  
Sbjct: 799 EETLAC-ERIFNGRAIAQVTKTKIRFT 824



 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 163 VLDIKFLYGCAKPTIVVLYQDN------KDARHVKTYEVALKDKDFVEGP----WSQNNL 212
           V D  FL+G  +P +++LY+ N      + +  + T ++     D  +      W++  L
Sbjct: 292 VRDCCFLHGYGEPVLMILYESNPPTWSGRLSLRMDTCKLVAVSIDCTKKKYTIVWTREKL 351

Query: 213 DNGADLLIPVPPPLCGVLIIGEETIVYCSANA 244
            + A  L PVP PL GVL++    I+Y S ++
Sbjct: 352 PSAAYSLFPVPNPLGGVLVLSSGHILYESQSS 383


>gi|70945139|ref|XP_742421.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56521397|emb|CAH76894.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 435

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 128/307 (41%), Gaps = 38/307 (12%)

Query: 698 IDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 756
           +++I + +I+ IP      +I  H+E       C  + +    ++    +   +     F
Sbjct: 1   LNEINETYIQKIPFYRTVEKIAYHKESGLLITSCPPEEKHKTNKNLKQIICFFNPHQNSF 60

Query: 757 ISTYPLDTFEYGCSILSCSFSDDSNVY---------YCVGTAYVLPEENEPTKGRILVFI 807
             +Y + + +Y  S + C +  + ++Y          CVGTA +    +EP+ G I +F 
Sbjct: 61  KYSYIIPS-KYNVSSI-CVYQINKDIYPNKSSINTLICVGTANINDRVSEPSSGHIYIFF 118

Query: 808 VEDGKLQLIAEKE------TKGAVYSLNAFNGKLLAAINQK----------IQLYKWM-- 849
            +  K  L   K         G +  L  F  KL+  IN            I L K++  
Sbjct: 119 AK-KKANLFEIKHIYTHNVNVGGITHLKQFYDKLITTINNTVVILDISEFLINLDKYVDN 177

Query: 850 -----LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
                L +DGT    +       I++L V    ++IVVGD+M S+++L Y      + E 
Sbjct: 178 TNKPKLENDGTIVDVASFTPSSWIMSLDV--IENYIVVGDIMTSVTILSYDFNNSILTEV 235

Query: 905 ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 964
            RDY+  W + V  L    +L ++   N    +K+S    DE+  +L  V  ++ G  VN
Sbjct: 236 CRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSSIKYNDEDSFKLSRVALFNHGHVVN 295

Query: 965 RFRHGSL 971
           +    SL
Sbjct: 296 KMLPVSL 302


>gi|348555856|ref|XP_003463739.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 2 [Cavia porcellus]
          Length = 1387

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 934
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1164 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1223

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 985
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1224 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGATEGPSKKSVVWENK 1277

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1278 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1337

Query: 1043 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 1338 AVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1369



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 95/493 (19%), Positives = 187/493 (37%), Gaps = 143/493 (29%)

Query: 123 IDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA----------FNIR-LEE--LQ 162
           +DPD R   + +Y     V+PF       +++G + E            ++R L+E  L 
Sbjct: 142 VDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLN 201

Query: 163 VLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDFVEGP----WSQNNLD 213
           ++D++FL+G  +PT+++L++ N+      A    T  +     +  +      WS  +L 
Sbjct: 202 IVDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLP 261

Query: 214 NGADLLIPVPPPLCGVLIIGEETIVYCSAN-------------AFKAIPIRPSITKAYGR 260
                 + VP P+ GV+I    +++Y + +                A P+R   T+   R
Sbjct: 262 FDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTLGTTAFPLR---TQEGVR 318

Query: 261 VDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIELLGETSIASTISYLDN 311
           +  D +        + ++    G +++L +IT     V     +    + + +++  ++ 
Sbjct: 319 ITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEP 378

Query: 312 AVVYIGSSYGDSQLIKL--NLQ---------------PDAKGSYVE-------------- 340
             +++GS  G+S L+K    LQ               P +K   V+              
Sbjct: 379 GYLFLGSRLGNSLLLKYTEKLQEPPASTVREAADKEEPPSKKKRVDSTAGWAGSKTVPQD 438

Query: 341 ------------------------VLERYVNLGPIVDFCVVD---LERQGQGQ----VVT 369
                                   V +  +N+GP  +  V +   L  +   +    +V 
Sbjct: 439 EVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPAFLSEENSPEPDLEIVV 498

Query: 370 CSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------------------------ 405
           CSG  K+G+L +++  I      + EL G   MW++                        
Sbjct: 499 CSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEETPKAEGSEQEPSAP 558

Query: 406 RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQV 464
            +  D     FL++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQV
Sbjct: 559 EAEDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQV 616

Query: 465 TSGSVRLVSSTSR 477
           +   +RL+   ++
Sbjct: 617 SPLGIRLLEGVNQ 629


>gi|119195757|ref|XP_001248482.1| hypothetical protein CIMG_02253 [Coccidioides immitis RS]
 gi|121769680|sp|Q1E5B0.1|CFT1_COCIM RecName: Full=Protein CFT1; AltName: Full=Cleavage factor two protein
            1
 gi|392862316|gb|EAS37050.2| protein CFT1 [Coccidioides immitis RS]
          Length = 1387

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 156/370 (42%), Gaps = 33/370 (8%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTK 800
            ++LL  +T+  + +Y L   E    + + +      + +      VGTA V  E+  P +
Sbjct: 1015 IKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITP-R 1073

Query: 801  GRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 849
            G I VF I+E          + KL++ A+ + KGAV +++   G+    + Q  +     
Sbjct: 1074 GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMAQGQKCMVRG 1133

Query: 850  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            L++DG+    +      ++  L         ++GD +K I    Y  E   +    +D  
Sbjct: 1134 LKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYSEEPYRLTLFGKDNE 1193

Query: 910  ANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
               + A + L D   +Y L A+++  +  +  + E  T  +  RL     +H G F +  
Sbjct: 1194 YLQVIAADFLPDGKRLYILVADDDCTIHVLEYDPEDPTSSKGDRLLHRSSFHTGHFTSTM 1253

Query: 967  -----RHGSLVMRLP---DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTN 1015
                    S     P   D DV  +P    V+  +  G IGV+  L  + Y  L  LQ+ 
Sbjct: 1254 TLLPEHSSSPSADDPEEDDMDVDYVPKSYQVLVTSQEGSIGVVTPLTEDSYRRLSALQSQ 1313

Query: 1016 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 1075
            L   ++   GLN + +R+   E      +  +DG+L+  +LD+   R  EI+  +   +E
Sbjct: 1314 LVTSMEHPCGLNPKAYRAV--ESDGFGGRGIVDGNLLLRWLDMGVQRKAEIAGRVGADIE 1371

Query: 1076 ELCKRVEELT 1085
             +   +E ++
Sbjct: 1372 SIRVDLETIS 1381


>gi|397582898|gb|EJK52454.1| hypothetical protein THAOC_28264, partial [Thalassiosira oceanica]
          Length = 353

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 45/186 (24%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP--------------Q 48
           + +YVVT+H P +V  S   ++ S    +L++AK  R+E+  +                +
Sbjct: 27  VGHYVVTSHPPGSVIASVRCSYLSTGSDDLVVAKSDRLEVRTVRQPDSSGAGPDEGDGGE 86

Query: 49  GLQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAE-SSEL-------- 99
            L  +L +P+ GRI+TL   R   E +D LF+ TER  + ++  DAE +S+L        
Sbjct: 87  ALPVVLSLPVNGRISTLSSVRFADERRDCLFLTTERGDYALISHDAELASDLAAGRNKSD 146

Query: 100 ----------------ITRAMGDVSD------RIGRPTDNGQIGIIDPDCRLIGLHLYDG 137
                            T A G   D        GR  + G I  +DP  R I +H+YDG
Sbjct: 147 GSGSGGPDIVGEHHPVATHASGTFRDADGHALSGGREAEVGPILAVDPLMRCIAVHVYDG 206

Query: 138 LFKVIP 143
              +IP
Sbjct: 207 FATIIP 212


>gi|167386195|ref|XP_001737658.1| spliceosomal protein sap [Entamoeba dispar SAW760]
 gi|165899468|gb|EDR26056.1| spliceosomal protein sap, putative [Entamoeba dispar SAW760]
          Length = 1079

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 148/691 (21%), Positives = 280/691 (40%), Gaps = 82/691 (11%)

Query: 301 SIASTISYLDNAVVYIGSSYGDSQLI------KLNLQPDA----KGSYVEVLERYVNLGP 350
           +I+ ++S+  N  +   +S   + L+       + +QP +    +  Y  +     +  P
Sbjct: 262 TISPSVSWSINGDIIFSASESQNHLVLKVPSLTIPIQPSSTYKPQSLYFNISTSISSHHP 321

Query: 351 IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTD 410
           +    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   +
Sbjct: 322 LTSVDVVDSHEVFQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYNE 379

Query: 411 DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVR 470
                ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  + 
Sbjct: 380 QTHQ-YVVIGLENQTYVLKT-LPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGII 437

Query: 471 LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH- 525
            + +   E  +E       ++ V T+++ QV++A         +VY E      TE K  
Sbjct: 438 TILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKKL 490

Query: 526 AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISVRIFSLPDLNLITKEHLGG 578
           A++E  I   +I  +     EN    ++A +   GM   +++   S     L T   + G
Sbjct: 491 AEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILETNITVEG 550

Query: 579 EIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 634
           E    S++L  F  IS  +L   +G  DG+   + +N K  EL   K +  G  P+    
Sbjct: 551 E--AESIILTQFNEISEPFLFLGIGMKDGYCYGYKINGKNSELMWCKLI--GNDPVVFGQ 606

Query: 635 FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 694
           +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A     ELT
Sbjct: 607 YEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGITNDELT 666

Query: 695 ---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDD 751
              IG++DD  +      PL   PR+I       T  +CS       +     +  ++D+
Sbjct: 667 VIAIGSLDD--RFTYDEQPLLYTPRKIIKSNYFPTTVLCS-------DNKSNLYNPIIDN 717

Query: 752 QTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YCVGTAY 790
           +T EF      +D  E G           SI    F  D  +            C  ++ 
Sbjct: 718 ETNEFNERKIGVDLQEDGKWASEVGIINNSIFKSYFKTDEAIICGAHVSFKKKQCFISSQ 777

Query: 791 VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
           V  +  +  KG   + +      +LI +   +    +L +   +LLA I   ++LY    
Sbjct: 778 V--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICRALTSCGERLLAGIGTTLRLY---- 831

Query: 851 RDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 909
            D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +    +D  
Sbjct: 832 -DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSITEKDRI 890

Query: 910 ANWMSAVEILDDDIYLGAENNFNLFTVRKNS 940
            + ++A  ILD+   +G +   ++F    N+
Sbjct: 891 WHSLTASTILDETSTIGFDKLGSVFITETNT 921


>gi|344234015|gb|EGV65885.1| hypothetical protein CANTEDRAFT_133308 [Candida tenuis ATCC 10573]
          Length = 1191

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 93/438 (21%), Positives = 174/438 (39%), Gaps = 64/438 (14%)

Query: 6   YVVTAHKPTNVTHSCV-GNFTSPQELNLIIAKCTRIEIHLLTPQGLQPML----DVPIYG 60
           YV++  +P N T  C+  N    +   L+I K  R+E H +      P L     + I  
Sbjct: 3   YVLSETRPPNCTKHCIYANVYKDKTPCLVINKINRLEFHTVVDTAGTPSLWFLDSLYIDE 62

Query: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSE--LITRAMGDVSDRIGRPTDNG 118
            I  L+ F       D L + TE Y+   L +D   S   +++    D S++   P+D  
Sbjct: 63  PILALDKFEHPNLPTDCLLLLTETYQLLFLWFDPTLSRFSILSTITFDASNQ-QLPSDAL 121

Query: 119 QIGIIDP--DCRLIGLHLYDGLFKVIPFDN-----------------KGQLKEAFNIRLE 159
              IIDP  +     ++ ++G  +V   +N                 + ++ E F   + 
Sbjct: 122 PKIIIDPSPNPEFFLVYFFEGFLQVFIINNSWSPSDGSANRPKRKHDQHEIVEEFTSSIG 181

Query: 160 ELQVLDIKFLYGCAKPTIV-VLYQDNKDARHVKTYEVALKDK---------DFVEGPWSQ 209
            +   DIK         +  VLY+D   A  +++Y + + +K         +F E P + 
Sbjct: 182 GIVFQDIKIHQNTGSSKVFSVLYRDYNYAYSLRSYSLDINNKSISILRQFDEFNEAPTTL 241

Query: 210 NNLDNGADLLIP------VPPPLCGVLIIGEETI-VYCSANAFKAIPIRPSITKAYGRVD 262
            N  NG  L++        P P   +L + +       S N+ + +  +         + 
Sbjct: 242 INPTNGGLLILTDSYIFYFPNPEITLLELSDNNADANISCNSEECVITKRLTISGSTDIS 301

Query: 263 A-------DGSRYLLGDHAGLLHLLVITHEKE-----KVTGLKIELLGETSIASTISYLD 310
           A       D  R LL ++ G  +LL     K+     +V  +    LG T++   + ++ 
Sbjct: 302 AFSYFTIIDERRILLVNNRGETYLLFFDSVKKSKSLFQVNSISFVKLGPTTVPINVLHIT 361

Query: 311 NAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG-QGQVVT 369
           + V ++ S    S L K+      K  Y+++ +   +  P++D   + ++  G Q ++ T
Sbjct: 362 DNVFFVASKLSQSVLFKIL----TKEPYIDICQFVSSSPPVLD---IQVQNNGNQIELFT 414

Query: 370 CSGAYKDGSLRIVRNGIG 387
           C G Y+ G  R + N + 
Sbjct: 415 CQGGYESGEYRRISNRLS 432


>gi|326501484|dbj|BAK02531.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 101

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 44/67 (65%)

Query: 684 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 743
           SLAIA+EGEL+IG+IDD+QKLHIR+I L E  R I HQEQS T         + A ES  
Sbjct: 4   SLAIAEEGELSIGSIDDVQKLHIRTILLIEQARSIFHQEQSMTRCFAFSSTPTIAGESFA 63

Query: 744 HFVRLLD 750
              RL++
Sbjct: 64  KIHRLME 70


>gi|74212803|dbj|BAE33365.1| unnamed protein product [Mus musculus]
          Length = 741

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 120/631 (19%), Positives = 245/631 (38%), Gaps = 169/631 (26%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTP------------------QGLQ 51
           AH PT +  +   NF +  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGKAHREKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAM-----GD 106
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++      +
Sbjct: 68  LVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 107 VSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------ 153
           + D   +     ++ + DPD R   + +Y     V+PF       +++G + E       
Sbjct: 128 LRDGFVQNVHTPRVRV-DPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEGQRSSFL 186

Query: 154 ----FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKD 201
                ++R L+E  L ++D++FL+G  +PT+++L++ N+      A    T  +     +
Sbjct: 187 PSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLN 246

Query: 202 FVEG--P--WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCS-------------ANA 244
             +   P  WS  +L       + VP P+ GV+I    +++Y +                
Sbjct: 247 ITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVALNSLTTG 306

Query: 245 FKAIPIRPSITKAYGRVDADGS--------RYLLGDHAGLLHLL-VITHEKEKVTGLKIE 295
             A P+R   T+   R+  D +        + ++    G +++L +IT     V     +
Sbjct: 307 TTAFPLR---TQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFD 363

Query: 296 LLGETSIASTISYLDNAVVYIGSSYGDSQLIKL--NLQ---------------PDAKGSY 338
               + + +++  ++   +++GS  G+S L+K    LQ               P +K   
Sbjct: 364 KAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSKKKR 423

Query: 339 VE--------------------------------------VLERYVNLGPIVDFCVVD-- 358
           VE                                      V +  +N+GP  +  V +  
Sbjct: 424 VEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVGEPA 483

Query: 359 -LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL------ 405
            L  + Q       ++V CSG  K+G+L +++  I      + EL G   MW++      
Sbjct: 484 FLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRK 543

Query: 406 ------------------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 447
                             ++  D     FL++S    T IL      E+ E +  GF +Q
Sbjct: 544 EEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQ 601

Query: 448 TQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 477
             T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 GPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|327287424|ref|XP_003228429.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Anolis carolinensis]
          Length = 1294

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)

Query: 762  LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG 811
            L+ +E+   + + S   +  V     Y  VGT  +  EE    +GRIL+      + E G
Sbjct: 1048 LEEWEHVTCMKTVSLKSEETVSGLKGYIAVGTCLMQGEEVT-CRGRILIMDIIEVVPEPG 1106

Query: 812  ------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSEC 862
                  K +++ EKE KG V +L   NG L++AI QKI L  W L+D+   G   + ++ 
Sbjct: 1107 QPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WSLKDNDLTGMAFIDTQL 1164

Query: 863  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 922
              H  I      +  +FI+  D+MKSISLL Y+ E   +   +RD     +  V+ + D 
Sbjct: 1165 YIHQMI------SVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYCVDFMVDS 1218

Query: 923  IYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 966
              LG   ++ + NL       E        RL    ++H+G  VN F
Sbjct: 1219 CQLGFLVSDRDRNLLVYMYLPEAKESFGGMRLLRRADFHVGAHVNAF 1265



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 51/281 (18%)

Query: 10  AHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLT------------------PQGLQ 51
           AH PT +  S   NF S  E NL++A  +++ ++ L                    + L+
Sbjct: 8   AHPPTGLEFSMYCNFFSNAERNLVVAGTSQLYVYRLNHDSESTTKSDRSSEGKSHKEKLE 67

Query: 52  PMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRI 111
            +     +G + ++   +  G  +D L ++ +  K  V+++D  + +L T ++    +  
Sbjct: 68  LVAAFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPE 127

Query: 112 GRPTDNGQIGI----IDPDCRLIGLHLYDGLFKVIPF-------DNKGQLKEA------- 153
            R      + I    +DPD R   + +Y     V+PF       +++G + E        
Sbjct: 128 LRDGFVQNVHIPKVRVDPDGRCAVMLIYGTRLVVLPFRRDTLTDEHEGVVGEGQKSSFLP 187

Query: 154 ---FNIR-LEE--LQVLDIKFLYGCAKPTIVVLYQDNKD-----ARHVKTYEVALKDKDF 202
               +IR L+E  L ++D++FLYG  +PT+++L++ N+      A    T  +     + 
Sbjct: 188 SYIIDIRELDEKLLNIIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNI 247

Query: 203 VEGP----WSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
           ++      WS +NL       + VP P+ GV+I    +++Y
Sbjct: 248 MQKVHPVIWSLSNLPFDCTQALAVPKPIGGVVIFAVNSLLY 288


>gi|196476797|gb|ACG76262.1| damaged-DNA binding protein DDB p127 subunit [Amblyomma americanum]
          Length = 74

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 10/73 (13%)

Query: 1026 LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVE 1075
            ++H  WRSF+ E+KT     F+DGDLIESFLDLSR +M E+ + +          + +V+
Sbjct: 2    IDHAFWRSFSTERKTEQPVGFIDGDLIESFLDLSRDKMQEVVQGIQMDDGSGMKKDATVD 61

Query: 1076 ELCKRVEELTRLH 1088
            +L K +EEL+R+H
Sbjct: 62   DLIKIIEELSRIH 74


>gi|85682925|gb|ABC73438.1| CG13900 [Drosophila miranda]
          Length = 341

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 119/283 (42%), Gaps = 27/283 (9%)

Query: 770  SILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQLIAEKETKGAVY 826
            +++  S + D   Y  VG A  L      ++G  L     D     L+ +   E      
Sbjct: 67   AMVKFSVAADGRYYLAVGIARDLQLNPRISQGGYLDIYKIDPTCSSLEFMHRTEIDEIPG 126

Query: 827  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDL 885
            +L  F G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+
Sbjct: 127  ALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDV 181

Query: 886  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 945
             +S+  L Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD
Sbjct: 182  QESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTD 240

Query: 946  E------------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTV 991
            +            +RG L   G     E +  F  G ++M L  + +  G    +I+ T+
Sbjct: 241  DVDEDPTGTKSLWDRGLLS--GASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYSTL 298

Query: 992  NGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 1033
            NG +G        E Y F + L+ ++R     + G +H  +RS
Sbjct: 299  NGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS 341


>gi|149066088|gb|EDM15961.1| cleavage and polyadenylation specific factor 1, 160kDa (predicted),
            isoform CRA_b [Rattus norvegicus]
          Length = 241

 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 934
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 18   NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 77

Query: 935  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 985
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 78   VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVMWENK 131

Query: 986  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 1042
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 132  HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 191

Query: 1043 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 1073
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 192  AVRNVLDGELLNRYLYLSTMERSELAKKIGTT 223


>gi|308805673|ref|XP_003080148.1| cleavage and polyadenylation specificity factor (ISS) [Ostreococcus
            tauri]
 gi|116058608|emb|CAL54315.1| cleavage and polyadenylation specificity factor (ISS), partial
            [Ostreococcus tauri]
          Length = 1473

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 166/381 (43%), Gaps = 42/381 (11%)

Query: 739  EESEMHF-VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD----DSNVYYCVGTAYVLP 793
            ++ E+ + VRLL   + + +  + L+  E+   + +    D     S  Y  VGTA  +P
Sbjct: 837  DDMELQYSVRLLVPGSLDCVWQHTLEPGEHVQCVRNVQLKDINTGHSLSYLAVGTA--MP 894

Query: 794  E-ENEPTKGRILVFIV--------EDG---KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 841
              E+ P +GR+ +F +         DG   K Q+   +E K A  +L    G L+ A+  
Sbjct: 895  GGEDTPCRGRVYLFNMVWERDSESADGYRWKGQVCCVREAKMACTALEGLGGHLIVAVGT 954

Query: 842  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EG 899
            K+ ++ W    DG REL S       I  + +    +FI+VGDL K +    +K    E 
Sbjct: 955  KLTVHTW----DG-RELNSVAFFDTPIHTVSINVVKNFILVGDLEKGLHFFRWKDTGFEK 1009

Query: 900  AIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 956
            ++ + ++D+    + + E L D      LG++ + N  T   + +     +  +L     
Sbjct: 1010 SLIQLSKDFERMDVVSSEFLIDGTTLSLLGSDMSGNARTFGYDPKSIESWKGQKLLPRAA 1069

Query: 957  YHLGEFVNR---FRHGSLVMRLPDSDVGQIP-----TVIFGTVNGVIGVIASLPHEQYLF 1008
            YH+G  ++R   F       ++  +D G+        V FGT++G +G+        Y  
Sbjct: 1070 YHVGSPISRMVRFNVEGSKSKMASTD-GKPKGANRFAVFFGTLDGALGIFMPTDPVTYEK 1128

Query: 1009 LEKLQTNLRKVIKGVGGLNHEQWRS---FNNEKKTVDAK-NFLDGDLIESFLDLSRTRMD 1064
            L  +Q  L   ++   G N   +R+   F  +   + A  + LDG L+  F  L+ +   
Sbjct: 1129 LLAIQRELTTAVRSPIGCNPRTFRTPKVFEGKHVQLRAPLDVLDGGLLSKFETLTFSEQV 1188

Query: 1065 EISKTMNVSVEELCKRVEELT 1085
            +I+ +  V  +     +++L+
Sbjct: 1189 KIASSAQVDRDLTLGLIQQLS 1209


>gi|401426063|ref|XP_003877516.1| putative CPSF-domain protein [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|322493761|emb|CBZ29051.1| putative CPSF-domain protein [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 1347

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 69/346 (19%)

Query: 786  VGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYSLNA---FNGKLLAA 838
            +G+++  P+E     GRI    + +     +L LIA K+  GA+    A   + G++   
Sbjct: 925  IGSSFTFPDEQRARSGRITWCALREEHQRQRLHLIASKDIGGALQCCAAVPHYKGRIALG 984

Query: 839  INQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVG-DLMKSISLLIY 894
            +N  + LY W   +D T   +  C        ++ LY  +    ++V  D+  S   +  
Sbjct: 985  VNGCVCLYNWNT-EDQTFVAEERCRIGLTVTKLIPLYDTSLAASVLVALDVRHSAFFIEV 1043

Query: 895  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--------NFNLFTV---------R 937
               +G+++   RD +        ++D  I   AEN        NF    V          
Sbjct: 1044 DTLQGSLKVLCRDADLRG-----VMDGHIGSDAENLCLFDDSLNFTAMKVVPLPVEAGDG 1098

Query: 938  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLPDS---DVGQI------- 983
              +   +   + R EV  + HLG+ V   R G      +M  P +      ++       
Sbjct: 1099 DAAAAGSVTAQYRFEVRAQCHLGDLVTCVRPGCFAATSLMEAPAACSLSRNRLLLPGIAG 1158

Query: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR----------- 1032
            P ++F T +G  GV+  +    YL L  L+ +L + ++ VGGL+H+ +R           
Sbjct: 1159 PQLVFATAHGGFGVVTPVQAATYLVLRALEASLVRTLQPVGGLSHQAFREVLRAGQERGV 1218

Query: 1033 ---------SFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISK 1068
                     +   E+ +  +  N +DGD++E F+ L  +    I +
Sbjct: 1219 SYLASKTGCALTRERLRRYEPLNTVDGDMVELFVQLPPSDKKHICR 1264


>gi|407851810|gb|EKG05523.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 313

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 36/154 (23%)

Query: 949  GRLEVVGEYHLGEFVNRFRHGS--------LVMRLPDSDVGQI--PTVIFGTVNGVIGVI 998
            G+LE   +YHLG+ V   + GS        + + +P + +  I  P V+FGT +G  G I
Sbjct: 81   GKLETSAQYHLGDMVTAMQLGSFAPCSVTNIAVPIPTTLIPGICGPQVVFGTSHGAFGTI 140

Query: 999  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS------------------------- 1033
              + +E YL L+ L+  +  V+  +GG  H  +R                          
Sbjct: 141  TPVSNETYLLLKALEVAVSSVVPALGGFEHVTYREVLRAGQERGYSRNASFENANVVSSG 200

Query: 1034 -FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 1066
             F+  +K   ++    GDLIESFL  S+T    I
Sbjct: 201  VFDKRRKRYLSRCVCSGDLIESFLTFSQTIQQRI 234


>gi|392558419|gb|EIW51607.1| hypothetical protein TRAVEDRAFT_176174 [Trametes versicolor FP-101664
            SS1]
          Length = 1431

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 111/515 (21%), Positives = 215/515 (41%), Gaps = 65/515 (12%)

Query: 617  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK---KLLYSNVNLKEVSHM 673
            L ++K++S    P        +  + VF   DRP+ I S++K   K+  S  ++ +    
Sbjct: 921  LAEQKRISRLLVPFVTSPAPGQTFSGVFFTGDRPSWILSTDKGGVKVFPSGHSVVQA--- 977

Query: 674  CPFNSAAFPDS----LAIAKEGELTIGTIDDIQ---KLHIRSIPLGE-HPRRICHQEQSR 725
              F +++  +S    L  ++EG   +  + D+Q    L  RS+P    +   +     S 
Sbjct: 978  --FTTSSLWESRGDFLLYSEEGPSLVEWMPDVQLDGHLPARSVPRSRPYSNVVFDASTSL 1035

Query: 726  TFAICSLKNQSCAEESEMHFV----------RLLDDQTFEFIST---YPLDTFEYG---- 768
              A  S +N+  + + + + V           L +  T E IS      +D +E+     
Sbjct: 1036 IVAASSFQNRFASYDEDGNVVWEPDSPNISSPLCECSTLELISPDGWITMDGYEFAPNEF 1095

Query: 769  ----CSILSCSFSDDSNV--YYCVGTAYVLPEENEPTKGRILVF----IVEDG------- 811
                 SI   + S +S +  +  VGT  +   E+   KG + +F    +V D        
Sbjct: 1096 VNCIVSIPLETMSTESGMKDFIAVGTT-INRGEDLAVKGAVYIFEIVEVVPDPSTHVKRW 1154

Query: 812  -KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA 870
             +L+L+   + KG V  L   NG L++++ QKI +  + L +        + G    +  
Sbjct: 1155 WRLKLLCRDDAKGPVSFLCGINGYLVSSMGQKIFVRAFDLDERLVGVAFLDVG----VYV 1210

Query: 871  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 930
              ++   + +V+GD +KS+  + ++ +   +    +D     ++  ++   D  L     
Sbjct: 1211 TSLRAVKNLLVIGDAVKSVWFVAFQEDPYKLVVLGKDPQLCCITRADLFFADGQLSIVTC 1270

Query: 931  FNLFTVRKNSEGATDEERG---RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-- 985
                 VR  +    D E      L    E+H G+  + +R   LV R P +   +IP   
Sbjct: 1271 DEEGIVRLYAYDPHDPESKSGQHLLRRTEFH-GQ--SEYRSSMLVARRPKNGDPEIPQAR 1327

Query: 986  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD-AK 1044
            ++ G+V+G +  +  +       L  LQ  L + ++ V  LN + +R   NE  +   +K
Sbjct: 1328 LVCGSVDGSLSTLTYVDEAASKRLHLLQGQLIRTVQHVAALNPKAFRMVRNEYVSRPLSK 1387

Query: 1045 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 1079
              LDG+L+ +F DL   R +E+++ +      + K
Sbjct: 1388 GILDGNLLATFEDLPIARQNEVTRQIGTDRATVLK 1422


>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
 gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
          Length = 1143

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 156/737 (21%), Positives = 284/737 (38%), Gaps = 106/737 (14%)

Query: 402  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 461
            +W++R       D ++V+S+ + T  L + + D + ET   G      TL C  ++ +  
Sbjct: 459  LWTMRDGAGS--DKYIVLSYANAT--LVLEIGDSVVETTSSGLTLDKPTLHC-GSVGSSY 513

Query: 462  VQVTSGSVRLVSSTSRELRNE------WKSPPGYSVNVATANASQVLLATGGGHLVYLEI 515
            VQV +  + ++   SRE  +E      W +P G  V  A++++ QV+L      L Y E 
Sbjct: 514  VQVMTDGMNVIP-MSREGSSESLPATKWTAPSG-QVICASSSSHQVVLGLTSS-LFYFED 570

Query: 516  GDGILTEVKHAQLEYEIS----CLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNL 570
              G  +E+      YE+S     + + P+      S   AV    D +VRI S+ P+   
Sbjct: 571  TPG--SELSAYDGAYELSSPPTAVAVAPVPAGRVRSPFVAVAT-DDETVRIVSVDPESMF 627

Query: 571  ITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR--KKVSLGTQ 628
             T    G      S+ L +   + YL   L +G  +   L+  TGE+     K V LG  
Sbjct: 628  ETVAVQGLMATASSLALLSVGQVLYLHMGLANGVYVRVELDPLTGEIVGSWSKFVGLGRL 687

Query: 629  PITLRTFSSKNTT------------HVFAASDR--PTVIYSSNKKLLYS--NVNLKEVSH 672
             +   T   + +             HV A SD   PT     N    ++   ++ + +  
Sbjct: 688  SVVPVTCGGEESILVSSRGVKTCLGHVNATSDTWVPT---GGNSAPFFALDAISGEPLDL 744

Query: 673  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL 732
               F++   P  +       L I T++  QK     + L    +R+  Q  + T  I   
Sbjct: 745  AHSFHTQDCPHGVIGVAGSTLKIFTVNTAQKWTENEVKLEGTAKRLI-QHDATTLTITQN 803

Query: 733  KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 792
             ++  +          +D+           D      SI    F D    Y+ VG +   
Sbjct: 804  PDRLVS----------VDNGAVGITK----DLGGPPTSICEVMFGDGKR-YFAVGGSRDG 848

Query: 793  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
                  T G I +F      L  +   E +    +L A+NG L+A I  +++LY   L+ 
Sbjct: 849  SPGTSGTSGYISIF--SSSSLGHVHTTEVEAPPLALCAYNGLLVAGIGSQVRLYALGLKQ 906

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA--IEERARDYNA 910
               R+ Q E       LA +  +  + + VGD+ +S+++ +   E+    I     D  +
Sbjct: 907  V-LRKAQIELSKRVTCLAHFAGS--NRVAVGDIRQSVTVCVVLEEDSGHVIYPLVCDKIS 963

Query: 911  NWMSAVEILD-DDIYLGAE-NNFNLFTVRKNSEGATDEERGRLEVV-------GEYHLGE 961
              ++ +  +D + + LG     F +  +   +    DE+   + +        G  H   
Sbjct: 964  RQVTCLFFVDYETVALGDRFGGFTMLRIPSEASKLADEDHNAVHLRQLEPTLNGPAHF-- 1021

Query: 962  FVNRFRHGSLVMRLPDSDVGQIPTVI------------FGTVNGVIGVIASLPHEQYLFL 1009
               RF H      +    +  +P  I             GTV+  + V++    +Q   L
Sbjct: 1022 ---RFDH------VASFHIEDVPVAIHMYNDYLVVCGLLGTVSAFVPVVSP---KQSRDL 1069

Query: 1010 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
            + ++  +     G+ G +H ++R +      V  K  +DGD++   L +   R +E+ + 
Sbjct: 1070 KTIEKFVCASDPGLMGRDHGRFRGYY-----VPVKEVVDGDMLREVLVMDEKRREEVGEK 1124

Query: 1070 MNVSVEELCKRVEELTR 1086
              + VE    RV  + +
Sbjct: 1125 TGLGVEGAVGRVVNVMK 1141


>gi|313215162|emb|CBY42850.1| unnamed protein product [Oikopleura dioica]
          Length = 228

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 10/219 (4%)

Query: 878  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFN 932
            ++ +VGD+ + I+LL ++ E   I + +R   A  ++AV IL D   +G      + N  
Sbjct: 5    NYALVGDIQQGITLLRHQGERNCISQISRARRAGEVTAVGILLDGNQVGLVSTDMQRNLQ 64

Query: 933  LFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 989
            ++  +   K S G     R     +G+  +  + +  R      ++  ++        + 
Sbjct: 65   VYMYKPDQKESNGGKQLVRQADINLGKRVISIWNSLGRQNDTFTKVALTENDARHVTFYA 124

Query: 990  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFL 1047
             ++G IG I  +  + +  LE LQT ++  +   GGLN  ++R   NE + ++  AKN +
Sbjct: 125  GLDGSIGDIVPVSEKVFRRLEMLQTLVQSHLPHYGGLNPREYRYCTNEYRDLENAAKNII 184

Query: 1048 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 1086
            DGDL+E F  LS T   ++S+ + V+ E L   + ++ R
Sbjct: 185  DGDLLERFNGLSFTEQTDLSRKIGVTREALLDDMMDVQR 223


>gi|442629265|ref|NP_001261223.1| CG13900, isoform C [Drosophila melanogaster]
 gi|440215087|gb|AGB93918.1| CG13900, isoform C [Drosophila melanogaster]
          Length = 469

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/475 (20%), Positives = 185/475 (38%), Gaps = 75/475 (15%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG----LQPMLDVPI 58
           ++ Y +T  K T VTH+  GNF+  ++  +++++   +E  LL P      +  +L   I
Sbjct: 1   MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLE--LLRPDSNTGKVHTLLSTEI 58

Query: 59  YGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNG 118
           +G +  L  FR  G  +D++ + ++  +  +L+++   + L             R    G
Sbjct: 59  FGCVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPG 118

Query: 119 QIGIIDPDCR--LIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFL---YGCA 173
           Q   IDP  R  +IG      L  ++  D + +L  +  +   +   L    +    G  
Sbjct: 119 QYFAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFD 178

Query: 174 KPTIVVLYQDNKDARHVKTYEVALKDKD---FVEGPWSQNN--------LDNGADLLIPV 222
            P    L  D ++A    + + A + +    F E     N+        L+  A+ L+ V
Sbjct: 179 NPMFACLEIDYEEADMDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSV 238

Query: 223 P-----PPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGSR---------- 267
           P     P   GVLI  E  + Y   N      IR  I +    +D D  R          
Sbjct: 239 PGGNDGP--SGVLICSENYLTY--KNLGDQHDIRCPIPRRRNDLD-DPERGMIFICSATH 293

Query: 268 -------YLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSY 320
                  +LL    G +  + +  + + V+ +K++       A+ +  L    +++ S +
Sbjct: 294 RTKSMYFFLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEF 353

Query: 321 GDSQLIKLN------------------------LQPDAKGSYVEVLERYVNLGPIVDFCV 356
           G+  L ++                           P A  + V +++   +  PI+   V
Sbjct: 354 GNHYLYQIAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLV-LVDELPSFAPIITSQV 412

Query: 357 VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTD 410
            DL  +   Q+    G     +LR++R+G+ ++E A  EL G    +W+++   D
Sbjct: 413 ADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRAD 467


>gi|428170663|gb|EKX39586.1| hypothetical protein GUITHDRAFT_143370 [Guillardia theta CCMP2712]
          Length = 1162

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 166/869 (19%), Positives = 332/869 (38%), Gaps = 192/869 (22%)

Query: 7   VVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-----LQPMLDVPIYGR 61
           V    +P++V  + VG F    E  L  A   ++ +  L PQG     L+     P++  
Sbjct: 4   VKNCRQPSSVVAATVGRFVDRHEECLFSATLAKVMLWQLNPQGEHDEPLRLFGSWPMFSG 63

Query: 62  IATLELFRPHGEAQDFLFIATERYKFCVLQWDAESS---ELITRAMGDVSDRI--GRPTD 116
           I          E  D + + T  + + +++WD  +    +++    G +   I  GR  +
Sbjct: 64  ITGCATLHGDDEEVDSILLLTRCFSWSIVRWDDSTKSFEKVLVHLNGSLEKVIAQGRLQN 123

Query: 117 NGQ-IGIIDPDCRLI--------------------------------GLHLY-------- 135
             Q +    PD  L+                                G+HL+        
Sbjct: 124 PSQGVYFPLPDGALMCQRAGPKRGEELVMVCCWNTIFHLFNLQRSRGGMHLWIRTSGGST 183

Query: 136 -DGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYE 194
              L K +P  N   +   F +   +    D         P + +L++D K    ++T  
Sbjct: 184 EYNLVKGVPGPNTRLISWCFLLPPNDTDFEDC--------PLMALLFEDEKGIVDLETCS 235

Query: 195 VALKDKD-----FVEGPWS----------QNNLDNGADLLIPVPPPLCGVLIIGEETIVY 239
           +  ++ +      ++GPWS            NL+ GA L   +P     + I    T  +
Sbjct: 236 IKYEESNKLNFNLLQGPWSFSTLHPETSLGRNLEVGAFLYPHLPSSQWAIRI----TSRF 291

Query: 240 CSANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIEL--- 296
             A++  A+P  P   +    +      ++LG + G +H+L ++ E  K   + I +   
Sbjct: 292 AVASSL-AVPAGPGSNRKKRSM-----HWILGSNDGQMHILSVSGES-KSANVTINVKRI 344

Query: 297 -----LGETSIASTISYLDNAVVYIGSSYGDSQLIKL---------NLQPDAKGSYVEVL 342
                L    +A+ +   +  +    +  G + ++ +         N Q D +   VEV+
Sbjct: 345 DTNIPLSNPRVATILRSQERTLQLWCTKTGYTSILDITKLSHHIENNSQTDQEIPGVEVM 404

Query: 343 ERYV--NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--------QA 392
                 +LG I D   VD    G+ Q++   G   D  LR+ R+G+ +++          
Sbjct: 405 CSPFEESLGSIKDAIAVDFLGDGEMQLLLACGEGSDSCLRLCRSGLEVSKIIEEGPEMPE 464

Query: 393 SVELQGIKGMWSLRSSTDD---------PFDTFLVVSF--ISETRILAMNLEDELEETEI 441
             ++  ++G+  L     D          FD+ LV SF  I++T++L ++   E     +
Sbjct: 465 CSDIFALRGLHILHVQPHDNGSNIQRLRAFDSHLVFSFASINQTKVLELD-GHEFVPVTL 523

Query: 442 EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV-------SSTSRELRNEWKSPPGYSVNVA 494
            G C    T+F     +  LVQVT   +RL+       +S+  +  + W +P   ++N+A
Sbjct: 524 PGLCEDANTVFITSLPHGHLVQVTEMEIRLINMRKSVMNSSQEDYLHVW-TPKIGNINMA 582

Query: 495 TANASQVLLATGGG------HLVYLEIG-DGILT--------------EVKHA-QLEYEI 532
           +       + T G        L  L +  D +L+              ++KH+ Q E++I
Sbjct: 583 SVVKYDTSIKTDGNQSLTPHQLASLVVAVDSVLSLFEILTHSNKKSEVKLKHSRQFEHQI 642

Query: 533 SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 592
           S +  N             V M  + S+ +  LPD  L  +++    +  +  ++ +  G
Sbjct: 643 SAVWPN------------EVHMLKNDSMEV-KLPD-KLSYQQYNQHCVCDQVAVVGSSTG 688

Query: 593 ISYLLCALGDGHLLNFLLNMKTGELTDRK------KVSLGTQPITLRTFSSKNTTH-VFA 645
           I+++           F +  KT  + D         + +G   +++    ++   H +F 
Sbjct: 689 IAHI-----------FPIPSKTSGIVDVMTLIEVCSLRVGETAVSIHVEETEQAVHGIFL 737

Query: 646 ASDRPTVIYSSNKKLLYSNVN-LKEVSHMCPFNSAAFPDSLAIAKEGE-LTIGTIDDIQK 703
            S+    I+  + +L    +N +++V  +C  ++   P SL    E + L  G + + ++
Sbjct: 738 HSNYNAWIHLRSGELEVKRINGIEKVKAVCSLHTELMPTSLVWINEKDCLQFGKLAEDRQ 797

Query: 704 ---LHIRSIPLGEHPRRICHQEQSRTFAI 729
              ++ RS+ L E+   + H  + R   +
Sbjct: 798 TSTIYQRSVKLAENVVSMTHSSRHRCLLL 826


>gi|402591342|gb|EJW85272.1| hypothetical protein WUBG_03818, partial [Wuchereria bancrofti]
          Length = 1025

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 94/439 (21%), Positives = 178/439 (40%), Gaps = 94/439 (21%)

Query: 123 IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTI 177
           +DP  R   + ++     V+PF++      ++ ++L ++      V+D+ FL G  +PT+
Sbjct: 140 VDPGQRCASMLVFGRYLAVLPFNDSSAQLHSYTVQLSQIDSRLVNVVDMVFLDGYYEPTL 199

Query: 178 VVLYQDNKDA--RHVKTYE------VALKDKDFV-EGPWSQNNLDNGADLLIPVPPPLCG 228
           + LY+  +    R    Y+      V+L  K+ V    W   NL    + ++ +P P+ G
Sbjct: 200 LFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPRPVGG 259

Query: 229 VLIIGEETIVYCS-------------ANAFKAIPIRPSITKAYGRVDADGS--------R 267
           +L++    ++Y +              + F   P++     A   +  DG+        +
Sbjct: 260 ILLVATNELIYLNQSVPPCGISLNSCMDGFTKFPLKDFKHMA---LTLDGAVVTVVSTNK 316

Query: 268 YLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS--- 323
            LL D  G L  L+++T     V  L+++   ET I  T++      ++IGS   DS   
Sbjct: 317 ILLCDRNGRLFTLILVTDATNSVKSLELKFQFETVIPCTMTSCAPGYLFIGSRLCDSVFL 376

Query: 324 --------------QLIKLNLQPDAKGS------------------------YVEVLERY 345
                         + IKL+ +P+A                            + VL++ 
Sbjct: 377 HCIFEQSTLEESATKKIKLSTEPNANEEDEDFELYGEMLPKVAKPDITEELLNIRVLDKL 436

Query: 346 VNLGP---IVDFC------VVDLERQGQGQVVTCS-GAYKDGSLRIVRNGIGINEQASVE 395
           +N+GP   I   C        ++ R+     + C+ G  K GS+ I++  I      S  
Sbjct: 437 LNVGPCKKITGGCPSISAYFQEITRKDPLFDLVCACGHGKFGSICILQRSIRPEIITSSS 496

Query: 396 LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 455
           ++G+   W++    DD    F+      E   LA+  +++L E E   F +   T+   +
Sbjct: 497 IEGVVQYWAIGRREDDTHMYFIAS---RELGTLALETDNDLVELEAPIFSTSESTIAAGE 553

Query: 456 AIYNQL-VQVTSGSVRLVS 473
                L VQVT+ S+ +V+
Sbjct: 554 LADGGLAVQVTTSSLVMVA 572


>gi|345566738|gb|EGX49680.1| hypothetical protein AOL_s00078g169 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1407

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 108/488 (22%), Positives = 188/488 (38%), Gaps = 60/488 (12%)

Query: 643  VFAASDRPTVIYSSNKKL--LYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTIGTID 699
             F A D PT I  S+K L  LY  +    V  + PFN+       L I  +G   +    
Sbjct: 913  AFMAGDTPTFITKSSKTLPKLY-KLQGGMVRSLSPFNTKETERGFLYIDSKGTARVCHFP 971

Query: 700  DIQKLHI---RSIPLGEHPRRICHQEQSRTFAICSLKNQSC--------AEESEMHFVRL 748
            ++   H    + IPL   P  + + +    + +  L              EE  +    L
Sbjct: 972  EVSMEHTWLSQRIPLERTPTSLTYYDPKNVYVVSVLSTSKPEVDDEDFQMEEGLVDETLL 1031

Query: 749  LDDQTFEFISTYPL-----DTFEY----------GCSILSCSFSDDSNVYYCVGTAYVLP 793
             + +T   +   P+     D +E+             +     + +  V   VGT  +L 
Sbjct: 1032 PELETGHLVMISPVTWTTTDRYEFPVHEVPFVVKAVELEISEVTKERKVLIAVGTG-LLR 1090

Query: 794  EENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQK 842
             EN P +G + VF V D            K +LI+ +E KG V +L   +G LL    QK
Sbjct: 1091 GENSPARGAVYVFDVIDVVPEIGKPETGKKFKLISREEVKGVVSTLAGMDGYLLITHGQK 1150

Query: 843  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 902
              +    L++DG+    +    + H      +T    ++ GD++K +S + +  E   + 
Sbjct: 1151 CMIRG--LKEDGSLLPVAFMDMNTHTTV--AKTLEKMVMFGDVLKGVSFVGFSEEPYKMI 1206

Query: 903  ERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959
               +D     ++A + L       ++ A+   N+  ++ + E        RL   GE + 
Sbjct: 1207 LFGKDPRQLSITAGDFLPAGTACYFVVADAQSNIHVLQYDPENPKSIHGNRLLPKGEIYC 1266

Query: 960  GEFVNRF----RHGSLVMRLPDSDVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEK 1011
            G  V       +  SL     + D+ +        +F T+ GV G ++S+    Y  L  
Sbjct: 1267 GHEVKSICILPKKKSLFTEPDEDDMDEDEDEEFLCMFSTMTGVFGTVSSITESMYRRLNV 1326

Query: 1012 LQTNLRKVIKGVGGLNHEQWRS--FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 1069
            +Q  +    + + GLN   +R+  F N   +   +  LDG L+  +L L   R  E++  
Sbjct: 1327 IQGQITNTGEHIAGLNPRAYRAAKFRN-TSSEPMRAILDGKLLVRWLMLGAGRRKELAGR 1385

Query: 1070 MNVSVEEL 1077
               S E L
Sbjct: 1386 AGTSEEML 1393


>gi|296806499|ref|XP_002844059.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238845361|gb|EEQ35023.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 1348

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 174/434 (40%), Gaps = 60/434 (13%)

Query: 707  RSIPLGEHPRRICHQEQSRTFAI-CSLKNQ-SCAEESEMHF-----------------VR 747
            R IPLGE    I +   S ++ I  S+K      E+ E H                  V+
Sbjct: 912  RKIPLGEQVDCIVYSSASESYVIGTSVKEDFKLPEDDESHTEWQNEFITFLPQLERGTVK 971

Query: 748  LLDDQTFEFISTYPLDTFEYGCSILSC---------SFSDDSNVYYCVGTAYVLPEENEP 798
            LLD + +      P          ++C           + +      VG+A V  E+  P
Sbjct: 972  LLDPKNWSIADIAPSSHELEPAERITCIEVIRLEISEITHERKDMVVVGSAIVKGEDIVP 1031

Query: 799  TKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAF--NGKLLAAINQKIQL 845
             KG I VF + D            +L+L A +E KGAV +L+     G L+ A  QK  +
Sbjct: 1032 -KGCIRVFEIIDVVPDPDHSEMNKRLKLFAREEVKGAVTALSGIGSQGFLIVAQGQKCMV 1090

Query: 846  YKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 905
                L++DG+    +      ++  L         +VGD +K +    Y  E   ++   
Sbjct: 1091 RG--LKEDGSLLPVAFKDAQCYVSVLKELKGTGMCIVGDAIKGLWFTGYSEEPYKLDLFG 1148

Query: 906  RDYNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 962
            ++     + A + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H+G F
Sbjct: 1149 KENENIAVIAADFLPDGNRLYVLVADDDCNLHVLQYDPEDPSSSKGDRLLHRNVFHVGHF 1208

Query: 963  VNRFR---HGSLVMRLP------DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLE 1010
             +       GS     P      D+D    P+   ++     G +G+I  L  + Y  L 
Sbjct: 1209 ASTMTLLPQGSHTPHSPADRDAMDTDAPLPPSKYQILMTFQTGSVGIITPLNEDSYRRLL 1268

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
             LQ+ L   ++   GLN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +
Sbjct: 1269 ALQSQLVNALEHPCGLNPRGYRAVESD-GIGGQRGMIDGNLLLRWLDMGAQRKAEIAGRV 1327

Query: 1071 NVSVEELCKRVEEL 1084
               V  +   +E+L
Sbjct: 1328 GADVGAIRMDLEKL 1341


>gi|407039323|gb|EKE39583.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
          Length = 1108

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 167/790 (21%), Positives = 316/790 (40%), Gaps = 92/790 (11%)

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 409
            P+    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   
Sbjct: 350  PLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYN 407

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +     ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  +
Sbjct: 408  EQTHQ-YVVIGLENQTYVLK-TLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGI 465

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH 525
              + +   E  +E       ++ V T+++ QV++A         +VY E      TE K 
Sbjct: 466  ITILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKK 518

Query: 526  -AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISVRIFSLPDLNLITKEHLG 577
             A++E  I   +I  +     EN    ++A +   GM   +++   S     L T   + 
Sbjct: 519  LAEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILETNITVE 578

Query: 578  GEIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 633
            GE    S++L  F  IS  +L   +G  DG    + +  K  EL   K +  GT P+   
Sbjct: 579  GE--AESIVLTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSELMWCKLI--GTDPVVFG 634

Query: 634  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 693
             +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A     EL
Sbjct: 635  QYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGITNDEL 694

Query: 694  T---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLD 750
            T   IG++DD  +      PL   PR++       T  +CS       +     +   +D
Sbjct: 695  TVIAIGSLDD--RFTYDEQPLLYTPRKVIKSNYFPTTVLCS-------DNKSNLYNPTID 745

Query: 751  DQTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YCVGTA 789
            ++T EF      +D  E G           SI    F  D  +            C  ++
Sbjct: 746  NETNEFNERKIGIDLQEDGKWASEVGIIDNSIFKSYFKTDEAIICGAHVSFKKKQCFISS 805

Query: 790  YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 849
             V  +  +  KG   + +      +LI +   +   ++L +   +LLA I   ++LY   
Sbjct: 806  QV--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICHALTSCGERLLAGIGTTLRLY--- 860

Query: 850  LRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 908
              D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +    +D 
Sbjct: 861  --DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSITEKDR 918

Query: 909  NANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA----TDEERGRLEVVGEYHLGEFVN 964
              + ++A  ILD+   +G +   ++F    N+       TD      E+V ++++G+ V 
Sbjct: 919  IWHSLTASTILDETSTIGFDKLGSVFITETNTNSNQLNLTDIIPLSNEIV-QWYVGDVVT 977

Query: 965  RFRHGSLVMRLPDSD-----VGQIP----TVIFGTVNGVIGVIASLP-HEQYLFLEKLQT 1014
                  +   + D+        QI      +I+  + G IGV+      E   F  KL+ 
Sbjct: 978  SVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIPFNFREDVEFFSKLEM 1037

Query: 1015 NLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSV 1074
             ++     +   + + +R  N     V     +DGDL + F  +      +I+  + ++ 
Sbjct: 1038 EIKNNYSPLLSNSFDSYRGTNYPGIGV-----IDGDLCDYFNQMDPKLQLQIANNLEMTP 1092

Query: 1075 EELCKRVEEL 1084
             ++  + E+ 
Sbjct: 1093 VQIQLKCEQF 1102


>gi|331247468|ref|XP_003336362.1| hypothetical protein PGTG_18394 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 346

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 110/261 (42%), Gaps = 48/261 (18%)

Query: 6   YVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATL 65
           Y+  A  PT+  H+   +F +P   +LI+ K + IE++ +  +GL+ +    ++  +  +
Sbjct: 3   YLTHAQLPTSTRHALKCDFIAPGVDSLILGKQSTIEVYGIESEGLKLLHQAKVFDVVEHI 62

Query: 66  ELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDP 125
             ++   ++   L + T       L++  +S+ +IT A   +     RP D  Q  I+DP
Sbjct: 63  NSYKKLTDSTSTLLVLTADLNLFTLRFCPKSATIITTASISLHQIGARPADYVQTSIVDP 122

Query: 126 DCRLIGLHLYDGLFKVIPF---------------------------------------DN 146
             R + LH  +G+  VIP                                        D 
Sbjct: 123 HGRCVVLHALNGILHVIPLVPGCLSNLRNLDPVLSKRKKANVSTGLASHSRNLHPSHNDP 182

Query: 147 KGQLKEAFNIRLEE--LQVLDIKFLYGCAKPTIVVLYQDNKDARHVKTYEVALK----DK 200
             ++  +F +RL E  +Q L+   L     PT++V+Y ++   R +++ ++ L+    ++
Sbjct: 183 DCEVYRSFQLRLNEVNVQALNFATLSPNYPPTLLVVYSNHLGDRVLRSRKIDLQAAHCEQ 242

Query: 201 DFVEGPWSQNNLDNGADLLIP 221
           +F  G    +  D    L+IP
Sbjct: 243 EFFRG---YHCCDPATALIIP 260


>gi|68060004|ref|XP_671977.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56488645|emb|CAI04030.1| hypothetical protein PB301494.00.0 [Plasmodium berghei]
          Length = 346

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 108/251 (43%), Gaps = 29/251 (11%)

Query: 269 LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           L+    G L+ + + HE   V  +  +      IA++I  L +  +++ + +G+    + 
Sbjct: 90  LIQSEYGDLYKIEVNHEDGIVKEIICKYFDTVPIANSICVLKSGALFVAAEFGNHFFYQF 149

Query: 329 N-------------LQPDAKGSYVE----------VLERYVNLGPIVDFCVVDLERQGQG 365
           +               P  K + +           ++++  +L PIVD  ++D +     
Sbjct: 150 SGIGNDSNESMCTSNHPSGKNAIIAFKTQKLKNLYLVDQIYSLSPIVDMKILDAKNSNIP 209

Query: 366 QVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISE 424
           Q+    G     SLRI+++G+ I E A+ EL G  + +W+++      +D +++VSF   
Sbjct: 210 QIYALCGRGPRSSLRILQHGLSIEELANNELPGKPRYIWTIKKDNSSEYDGYIIVSFEGN 269

Query: 425 TRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 484
           T IL +   + +EE       +   T+  +    N  +QV    +R ++    ++  EW 
Sbjct: 270 TLILEIG--ETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHING---KIVQEWV 324

Query: 485 SPPGYSVNVAT 495
            P    ++ AT
Sbjct: 325 PPKNKQIDAAT 335


>gi|393907593|gb|EJD74705.1| CPSF A subunit region family protein [Loa loa]
          Length = 990

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 94/438 (21%), Positives = 178/438 (40%), Gaps = 93/438 (21%)

Query: 123 IDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTI 177
           +DP  R   + ++     V+PF++ G    ++ ++L ++      V+D+ FL G  +PT+
Sbjct: 140 VDPGQRCAAMLVFGRYLAVLPFNDSGAQLHSYTVQLSQIDSRLVNVVDMVFLDGYYEPTL 199

Query: 178 VVLYQDNKDA--RHVKTYE------VALKDKDFV-EGPWSQNNLDNGADLLIPVPPPLCG 228
           + LY+  +    R    Y+      V+L  K+ V    W   NL    + ++ +P P+ G
Sbjct: 200 LFLYEPVQTTCGRACVRYDTMCVLGVSLNVKEQVLASVWQLTNLPMDCNQILAIPRPVGG 259

Query: 229 VLIIGEETIVYCS-------------ANAFKAIPIRPSITKAYGRVDADG--------SR 267
           +L++    ++Y +              + F   P+R      +  +  DG        ++
Sbjct: 260 ILLVATNELIYLNQSVPPCGISLNSCMDGFTKFPLR---DFKHMVLTLDGCVVTVISTNK 316

Query: 268 YLLGDHAG-LLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDS--- 323
            LL D  G L  L+++T     V  L+++   +T I  T++      ++IGS   DS   
Sbjct: 317 ILLCDRNGRLFTLVLVTDATNSVKSLELKFQFKTVIPCTMTSCAPGYLFIGSRLCDSVFL 376

Query: 324 --------------QLIKLNLQ---------------------PDAKGSY--VEVLERYV 346
                         + IKLN +                     PD+      + VL++ +
Sbjct: 377 HCIFEQSTLDESAPKKIKLNTELNANEDEDFELYGEVLPKVAKPDSAEELLNIRVLDKLL 436

Query: 347 NLGP---IVDFC------VVDLERQGQGQVVTCS-GAYKDGSLRIVRNGIGINEQASVEL 396
           N+GP   I   C        ++ R+     + C+ G  K GS+ I +  +      S  +
Sbjct: 437 NVGPCKKITGGCPSISAYFQEVTRKDPLFDLVCACGHGKFGSICIFQRSVRPEIVTSSSI 496

Query: 397 QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 456
           +G+   W++    DD    F+      E   LA+  +++L E E   F +   T+   + 
Sbjct: 497 EGVVQYWAVGRREDDTHMYFIAS---KELGTLALETDNDLVELEAPIFATSEPTIAAGEL 553

Query: 457 IYNQL-VQVTSGSVRLVS 473
               L VQVT+ S+ +V+
Sbjct: 554 ADGGLAVQVTTSSLVMVA 571


>gi|237839083|ref|XP_002368839.1| hypothetical protein TGME49_067710 [Toxoplasma gondii ME49]
 gi|211966503|gb|EEB01699.1| hypothetical protein TGME49_067710 [Toxoplasma gondii ME49]
          Length = 2136

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 62/224 (27%)

Query: 785  CVGTAYVLPEENEPTKGRILVFIVE---DGKL--QLIAE-KETKGAVYSLNAFNGKLLAA 838
            CVGTA V+  ++EP +G I++  V    DG+L  QL A   E +  V  L  F G LLAA
Sbjct: 1674 CVGTAEVMASDSEPKEGLIILLDVRRGTDGRLVVQLAAHIHELRSGVQQLRPFQGLLLAA 1733

Query: 839  INQKIQLYKWMLRDDGTRELQSE------------------------------------- 861
             N +++L+      +G   L++E                                     
Sbjct: 1734 CNHRVRLFGLRRELEGAAGLEAEMEGDSPQASEVHAGDRGRSSAGRRQGARARDRTEEKG 1793

Query: 862  --------------CGHHGHILALYVQTRGDFIV-VGDLMKSISLLIYKHEEGAIEERAR 906
                          C H  +     + T  D IV +GD++ S  LL +  ++ A +E AR
Sbjct: 1794 RELCEMLKARLELVCSHSSNAFVSSMDTWHDEIVCLGDMVASAVLLRFSPKDNAFKEIAR 1853

Query: 907  DYNANWMSAVEILDDDIYLGAENNFNLFTVRK----NSEGATDE 946
            D NA W  AV  L  +++  A+ + N++ + +     SEG  +E
Sbjct: 1854 DTNACWTLAVSCLSPNLHYLADADRNIWLLERASLLGSEGRREE 1897



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 987  IFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            ++ +  G IG +  +P EQ +  L  LQ  + KV K +G L+   + S      TV +K 
Sbjct: 2050 LWASSEGAIGHLLQIPDEQTFARLAVLQDAVTKVTKSIGKLSAVAFHSVKVGTATVPSKG 2109

Query: 1046 FLDGDLIESFLDL 1058
            F+DGD++E FL+ 
Sbjct: 2110 FIDGDILERFLEF 2122



 Score = 46.6 bits (109), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 32/137 (23%)

Query: 339 VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQ-ASVELQ 397
           +++L+ + NLGPIVD C+ ++E   Q  ++   G  +  SLR +R+G+ ++   ASV L 
Sbjct: 751 LQLLQVFPNLGPIVDCCLAEVEGLDQRLLIVACGHGRSTSLRFIRSGLALHASCASVALH 810

Query: 398 G-IKGMWSL-------------------RSSTDDPF-----DTFL------VVSFISETR 426
             +  +W+L                   RS T   F     D  L      V++F  ETR
Sbjct: 811 APVHRLWTLDLSPYAIAASATGMRISGRRSHTRGEFSKTRADALLARGPIAVLAFPHETR 870

Query: 427 ILAMNLEDELEETEIEG 443
           +LA  L+   + +  +G
Sbjct: 871 VLAWTLKPRGDRSNPKG 887



 Score = 40.0 bits (92), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 15/107 (14%)

Query: 78  LFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDG 137
           L + T+R    +L++D E   ++T    D+ +   R  D G +  + P  R I ++ Y+ 
Sbjct: 186 LLVLTDRQILLLLRYDEEKQTVVTVESIDLKEVSTRFVDGGPLMAVCPTTRCIVVYQYES 245

Query: 138 LFKVIPF--DNKGQLKEAFN-------------IRLEELQVLDIKFL 169
           L + +PF  +    L  A N              RL+E  VLDI FL
Sbjct: 246 LLQYLPFGPEASSSLSPARNHEAGSSLFSGVRLFRLDEQNVLDICFL 292


>gi|449706784|gb|EMD46555.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica KU27]
          Length = 1079

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 164/794 (20%), Positives = 319/794 (40%), Gaps = 100/794 (12%)

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 409
            P+    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   
Sbjct: 321  PLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYN 378

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +     ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  +
Sbjct: 379  EQTHQ-YVVIGLENQTYVLK-TLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGI 436

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH 525
              + +   E  +E       ++ V T+++ QV++A         +VY E      TE K 
Sbjct: 437  ITILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKK 489

Query: 526  -AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISV----RIFSLPDLNLITK 573
             A++E  I   +I  +     EN    ++A +   GM   +++    +   + ++N+  +
Sbjct: 490  LAEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILEINITVE 549

Query: 574  EHLGGEIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                GE    S++L  F  IS  +L   +G  DG    + +  K  EL   K +  GT P
Sbjct: 550  ----GE--AESIILTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSELMWCKLI--GTDP 601

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            +    +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A   
Sbjct: 602  VVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGIT 661

Query: 690  EGELT---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV 746
              ELT   IG++DD  +      PL   PR++       T  +CS       +     + 
Sbjct: 662  NDELTVIAIGSLDD--RFTYDEQPLLYTPRKVIKSNYFPTTVLCS-------DNKSNLYN 712

Query: 747  RLLDDQTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YC 785
              +D++T EF      +D  E G           S+    F  D  +            C
Sbjct: 713  PTIDNETNEFNERKIGIDLQEDGKWASEVGIIDNSLFKSYFKTDEAIICGAHVSFKKKQC 772

Query: 786  VGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 845
              ++ V  +  +  KG   + +      +LI +   +   ++L +   +LLA I   ++L
Sbjct: 773  FISSQV--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICHALTSCGERLLAGIGTTLRL 830

Query: 846  YKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
            Y     D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +   
Sbjct: 831  Y-----DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSIT 885

Query: 905  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA----TDEERGRLEVVGEYHLG 960
             +D   + ++A  ILD+   +G +   ++F    N+       TD      E+V ++++G
Sbjct: 886  EKDRIWHSLTASTILDETSTIGFDKLGSVFITETNTNSNQLNLTDIIPLSNEIV-QWYVG 944

Query: 961  EFVNRFRHGSLVMRLPDSD-----VGQIP----TVIFGTVNGVIGVIASLP-HEQYLFLE 1010
            + V       +   + D+        QI      +I+  + G IGV+      E   F  
Sbjct: 945  DVVTSVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIPFNFREDVEFFS 1004

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
            KL+  ++     +   + + +R  N     V     +DGDL + F  +      +I+  +
Sbjct: 1005 KLEMEIKNNYSPLLSNSFDSYRGTNYPGIGV-----IDGDLCDYFNQMDPKLQLQIANNL 1059

Query: 1071 NVSVEELCKRVEEL 1084
             ++  ++  + E+ 
Sbjct: 1060 EMTPVQIQLKCEQF 1073


>gi|221502136|gb|EEE27880.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 2131

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 62/224 (27%)

Query: 785  CVGTAYVLPEENEPTKGRILVFIVE---DGKL--QLIAE-KETKGAVYSLNAFNGKLLAA 838
            CVGTA V+  ++EP +G I++  V    DG+L  QL A   E +  V  L  F G LLAA
Sbjct: 1669 CVGTAEVIASDSEPKEGLIILLDVRRGTDGRLVVQLAAHIHELRSGVQQLRPFQGLLLAA 1728

Query: 839  INQKIQLYKWMLRDDGTRELQSE------------------------------------- 861
             N +++L+      +G   L++E                                     
Sbjct: 1729 CNHRVRLFGLRRELEGAAGLEAEMEGDSPQASEVHAGDRGRSSAGRRQGARARDRTEEKG 1788

Query: 862  --------------CGHHGHILALYVQTRGDFIV-VGDLMKSISLLIYKHEEGAIEERAR 906
                          C H  +     + T  D IV +GD++ S  LL +  ++ A +E AR
Sbjct: 1789 RELCEMLKARLELVCSHSSNAFVSSMDTWHDEIVCLGDMVASAVLLRFSPKDNAFKEIAR 1848

Query: 907  DYNANWMSAVEILDDDIYLGAENNFNLFTVRK----NSEGATDE 946
            D NA W  AV  L  +++  A+ + N++ + +     SEG  +E
Sbjct: 1849 DTNACWTLAVSCLSPNLHYLADADRNIWLLERASLLGSEGRREE 1892



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 987  IFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 1045
            ++ +  G IG +  +P EQ +  L  LQ  + KV K +G L+   + S      TV +K 
Sbjct: 2045 LWASSEGAIGHLLQIPDEQTFARLAVLQDAVTKVTKSIGKLSAVAFHSVKVGTATVPSKG 2104

Query: 1046 FLDGDLIESFLDL 1058
            F+DGD++E FL+ 
Sbjct: 2105 FIDGDILERFLEF 2117



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 339 VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQ-ASVELQ 397
           +++L+ + NLGPIVD C+ ++E   Q  ++   G  +  SLR +R+G+ ++   ASV L 
Sbjct: 751 LQLLQVFPNLGPIVDCCLAEVEGLDQRLLIVACGHGRSTSLRFIRSGLALHASCASVALH 810

Query: 398 G-IKGMWSL 405
             +  +W+L
Sbjct: 811 APVHRLWTL 819


>gi|328773280|gb|EGF83317.1| hypothetical protein BATDEDRAFT_21894 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1673

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 40/314 (12%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+P+ N P   R         K + +  ++ +    ++   N  LLAAI  KI +Y+   
Sbjct: 1373 VVPDPNNPQTNR---------KFKHVDSEDDRSPFSAICTVNDYLLAAIGPKIIMYQL-- 1421

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
             +DG  E+        ++    + +  + I + D+ KS+  + ++ E   +    RD + 
Sbjct: 1422 -EDG--EITGVAFLDVNVFVTSLSSVKNLIQICDIQKSVWFVAFQEEPAKLAVLGRDVHP 1478

Query: 911  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
                A  +L DD  L    A+ + NL T+    +        RL   GE HLG+ V++F 
Sbjct: 1479 LQGYAANMLIDDNQLALLVADGDKNLHTMIYAPDNVQSLGGERLIRKGEIHLGQHVSKF- 1537

Query: 968  HGSLVMRLPDSDVGQIPTVIF--------GTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 1019
                 +R+    + +   ++F         T++G + +I  +    +  L  L + +   
Sbjct: 1538 -----IRMRRKPLLRNDAIVFSKQYLNVAATLDGALEIITPVSERIFKRLYGLYSRMVTS 1592

Query: 1020 IKGVGGLNHEQWRSFNNEKKTVDAKNF---------LDGDLIESFLDLSRTRMDEISKTM 1070
            I+ + GLN   +R   +  + +    F         LDGDL+  ++ LSRT+   ++K +
Sbjct: 1593 IEHIAGLNPRGFRQAQHRVRPITLSGFIGPPGPRGILDGDLLYEYVRLSRTQQRGLAKAI 1652

Query: 1071 NVSVEELCKRVEEL 1084
                + L   + E+
Sbjct: 1653 GSKDDRLMDDLLEV 1666


>gi|67473926|ref|XP_652712.1| splicing factor 3b subunit 3 [Entamoeba histolytica HM-1:IMSS]
 gi|56469590|gb|EAL47325.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica
            HM-1:IMSS]
          Length = 1108

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 164/794 (20%), Positives = 319/794 (40%), Gaps = 100/794 (12%)

Query: 350  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 409
            P+    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   
Sbjct: 350  PLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYN 407

Query: 410  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 469
            +     ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  +
Sbjct: 408  EQTHQ-YVVIGLENQTYVLK-TLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGI 465

Query: 470  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH 525
              + +   E  +E       ++ V T+++ QV++A         +VY E      TE K 
Sbjct: 466  ITILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKK 518

Query: 526  -AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISV----RIFSLPDLNLITK 573
             A++E  I   +I  +     EN    ++A +   GM   +++    +   + ++N+  +
Sbjct: 519  LAEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILEINITVE 578

Query: 574  EHLGGEIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQP 629
                GE    S++L  F  IS  +L   +G  DG    + +  K  EL   K +  GT P
Sbjct: 579  ----GE--AESIILTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSELMWCKLI--GTDP 630

Query: 630  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 689
            +    +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A   
Sbjct: 631  VVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGIT 690

Query: 690  EGELT---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV 746
              ELT   IG++DD  +      PL   PR++       T  +CS       +     + 
Sbjct: 691  NDELTVIAIGSLDD--RFTYDEQPLLYTPRKVIKSNYFPTTVLCS-------DNKSNLYN 741

Query: 747  RLLDDQTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YC 785
              +D++T EF      +D  E G           S+    F  D  +            C
Sbjct: 742  PTIDNETNEFNERKIGIDLQEDGKWASEVGIIDNSLFKSYFKTDEAIICGAHVSFKKKQC 801

Query: 786  VGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 845
              ++ V  +  +  KG   + +      +LI +   +   ++L +   +LLA I   ++L
Sbjct: 802  FISSQV--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICHALTSCGERLLAGIGTTLRL 859

Query: 846  YKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 904
            Y     D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +   
Sbjct: 860  Y-----DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSIT 914

Query: 905  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA----TDEERGRLEVVGEYHLG 960
             +D   + ++A  ILD+   +G +   ++F    N+       TD      E+V ++++G
Sbjct: 915  EKDRIWHSLTASTILDETSTIGFDKLGSVFITETNTNSNQLNLTDIIPLSNEIV-QWYVG 973

Query: 961  EFVNRFRHGSLVMRLPDSD-----VGQIP----TVIFGTVNGVIGVIASLP-HEQYLFLE 1010
            + V       +   + D+        QI      +I+  + G IGV+      E   F  
Sbjct: 974  DVVTSVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIPFNFREDVEFFS 1033

Query: 1011 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 1070
            KL+  ++     +   + + +R  N     V     +DGDL + F  +      +I+  +
Sbjct: 1034 KLEMEIKNNYSPLLSNSFDSYRGTNYPGIGV-----IDGDLCDYFNQMDPKLQLQIANNL 1088

Query: 1071 NVSVEELCKRVEEL 1084
             ++  ++  + E+ 
Sbjct: 1089 EMTPVQIQLKCEQF 1102


>gi|326477251|gb|EGE01261.1| protein kinase subdomain-containing protein [Trichophyton equinum CBS
            127.97]
          Length = 1267

 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 24/308 (7%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE ++P K +         KL+L A++E KGAV +L+   G+    + Q  +     L
Sbjct: 963  VVPEPDQPEKSK---------KLKLFAKEEVKGAVTALSGIGGQGFLIVAQGQKCMVRGL 1013

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            ++DG+    +      ++  L         ++GD  K +  + Y  E   ++   ++   
Sbjct: 1014 KEDGSLLPVAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFIGYSEEPYKLDLFGKENEN 1073

Query: 911  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +   
Sbjct: 1074 LAVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMT 1133

Query: 968  ---HGSLVMRLP----DSDVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
               HG+     P      D   +P     ++     G I VI  L  + Y  L  LQ+ L
Sbjct: 1134 LLPHGAYTPSAPVDEDAMDTDSLPPSKYQILMTFQTGSIAVITPLSEDSYRRLLALQSQL 1193

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
               ++    LN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1194 VNALEHPCSLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1252

Query: 1077 LCKRVEEL 1084
            +   +E+L
Sbjct: 1253 IRTDLEKL 1260


>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
          Length = 1288

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 31/389 (7%)

Query: 269 LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           L  +H  L  + ++  EK     + I        A  +    +  ++  S YG+S L + 
Sbjct: 329 LQSNHGDLYKVKILPDEKTASPVVTISYFDTIPQAQNLHIFKHGYMFANSEYGNSYLYQF 388

Query: 329 -NLQPDAKGSYVEVLE-RYVNLGP---IVDFCVVD--------LERQGQGQVVTCSGAYK 375
            NL  + +     V+  R + + P   + +  V D        L  Q   +V        
Sbjct: 389 ENLDDEEESMLTSVMPGRRLIIEPRTVLKNLLVADKLALVNPILSSQLTERVPLTIATST 448

Query: 376 DGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRIL--AMNL 432
            G +R+   G+   +  S  L      +W++ ++    F   L ++    T IL  A   
Sbjct: 449 LGDVRLFTAGVNFMDIISSPLPAAPLDIWTV-ATNGSRFHKLLFIALQESTMILKIAAGT 507

Query: 433 EDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS-VRLVSST--SRELRNEWKSPPGY 489
            +ELE        +Q +T+         ++QVT    V ++ +   S E + EW  P G 
Sbjct: 508 VEELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMVHIIENRDESYESKLEWFPPAGI 567

Query: 490 SVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVK-HAQLEYEISCLDINPIGENPSYS 547
            +  A++N++Q++LA     +VY EIG    L E++   ++E  I+ L I   G    Y 
Sbjct: 568 CILKASSNSTQLILALSNNEVVYFEIGSNESLNELQDRIEVEERITALAIGN-GNRSDYM 626

Query: 548 QIAAVGMWTDISVRIFSLP---DLNLITKEHLGGEIIPRSVLLCAFEGISYLL-CALGDG 603
            IA+V    D +V+++SL      N +    +   + P S L  A  G S  L   L  G
Sbjct: 627 IIASV----DSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQLASSGGSLCLHIGLDSG 682

Query: 604 HLLNFLLNMKTGELTDRKKVSLGTQPITL 632
             +   L+  TGEL D +   LGT+P+ +
Sbjct: 683 VYVRSKLDRNTGELFDVRTKYLGTKPVEI 711


>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
 gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
          Length = 1288

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 31/389 (7%)

Query: 269 LLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAVVYIGSSYGDSQLIKL 328
           L  +H  L  + ++  EK     + I        A  +    +  ++  S YG+S L + 
Sbjct: 329 LQSNHGDLYKVKILPDEKTASPVVTISYFDTIPQAQNLHIFKHGYMFANSEYGNSYLYQF 388

Query: 329 -NLQPDAKGSYVEVLE-RYVNLGP---IVDFCVVD--------LERQGQGQVVTCSGAYK 375
            NL  + +     V+  R + + P   + +  V D        L  Q   +V        
Sbjct: 389 ENLDDEEESMLTSVMPGRRLIIEPRTVLKNLLVADKLALVNPILSSQLTERVPLTIATST 448

Query: 376 DGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRIL--AMNL 432
            G +R+   G+   +  S  L      +W++ ++    F   L ++    T IL  A   
Sbjct: 449 LGDVRLFTAGVNFMDIISSPLPAAPLDIWTV-ATNGSRFHKLLFIALQESTMILKIAAGT 507

Query: 433 EDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS-VRLVSST--SRELRNEWKSPPGY 489
            +ELE        +Q +T+         ++QVT    V ++ +   S E + EW  P G 
Sbjct: 508 VEELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMVHIIENRDESYESKLEWFPPAGI 567

Query: 490 SVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVK-HAQLEYEISCLDINPIGENPSYS 547
            +  A++N++Q++LA     +VY EIG    L E++   ++E  I+ L I   G    Y 
Sbjct: 568 CILKASSNSTQLILALSNNEVVYFEIGSNESLNELQDRIEVEERITALAIGN-GNRSDYM 626

Query: 548 QIAAVGMWTDISVRIFSLP---DLNLITKEHLGGEIIPRSVLLCAFEGISYLL-CALGDG 603
            IA+V    D +V+++SL      N +    +   + P S L  A  G S  L   L  G
Sbjct: 627 IIASV----DSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQLASSGGSLCLHIGLDSG 682

Query: 604 HLLNFLLNMKTGELTDRKKVSLGTQPITL 632
             +   L+  TGEL D +   LGT+P+ +
Sbjct: 683 VYVRSKLDRNTGELFDVRTKYLGTKPVEI 711


>gi|353231025|emb|CCD77443.1| putative cleavage and polyadenylation specificity factor cpsf
           [Schistosoma mansoni]
          Length = 1825

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 165/405 (40%), Gaps = 79/405 (19%)

Query: 13  PTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-----LQPMLDVPIYGRIATLEL 67
           PT V +    + T P+  NL+I +   IEI+ +            +    +Y  IA +  
Sbjct: 23  PTAVDNCLYCHLTHPKLKNLVITRGGFIEIYNVKSSASGETRFNWVYGTSVYENIADIVT 82

Query: 68  FRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV---SDRIGRPTDNGQIGII- 123
            R  G+  D L ++    K  V+ ++  + EL T ++ +    + + GR  +  ++ I+ 
Sbjct: 83  VRFTGDLLDSLLLSFPEAKVAVMNFNPVTFELRTLSLHNYEFENLKSGR-MNFTKLPILR 141

Query: 124 -DPDCRLIGLHLYDGLFKVIPFDNKGQLKEA------FNIRLEEL--------------- 161
            DP  R   + +YD    V+PF     L  A       ++R   L               
Sbjct: 142 LDPHQRCAVMLVYDRHLAVLPFRRTEVLVSAETDPKHISVRNSLLWQQRATAPLLATFTT 201

Query: 162 -----------QVLDIKFLYGCAKPTIVVLYQD------NKDARHVKTYEVALK---DKD 201
                       VLD++FLYG  +PT++VLY+          AR      VAL     K 
Sbjct: 202 CLSTSTGEKINNVLDMQFLYGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKR 261

Query: 202 FVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------------CSANAFKAI 248
                W Q +L      +I VP P+ GV+++   +I+Y             C A      
Sbjct: 262 TNPVIWFQESLPFDCRSVISVPQPIGGVVVMAANSILYLKQTLPSCGLPLNCYAQISTNF 321

Query: 249 PIRPSITKAYGRVDADGSR--------YLLGDHAGLLHLLVITHEK--EKVTGLKIELLG 298
           P+R  +    G +  DG R        +L+G  +G L+LL +  E+  + VT L    +G
Sbjct: 322 PMRQDVPSC-GPLSIDGCRVVTLNETQFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKVG 380

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIKLN---LQPDAKGSYVE 340
                  +  L++  ++IGS + DS L+K++   L  DA G  V+
Sbjct: 381 HAVPPHCMVLLESKYLFIGSRFCDSVLMKIDYSLLCVDANGKEVD 425


>gi|256079900|ref|XP_002576222.1| cleavage and polyadenylation specificity factor cpsf [Schistosoma
           mansoni]
          Length = 1958

 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 165/405 (40%), Gaps = 79/405 (19%)

Query: 13  PTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQG-----LQPMLDVPIYGRIATLEL 67
           PT V +    + T P+  NL+I +   IEI+ +            +    +Y  IA +  
Sbjct: 40  PTAVDNCLYCHLTHPKLKNLVITRGGFIEIYNVKSSASGETRFNWVYGTSVYENIADIVT 99

Query: 68  FRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDV---SDRIGRPTDNGQIGII- 123
            R  G+  D L ++    K  V+ ++  + EL T ++ +    + + GR  +  ++ I+ 
Sbjct: 100 VRFTGDLLDSLLLSFPEAKVAVMNFNPVTFELRTLSLHNYEFENLKSGR-MNFTKLPILR 158

Query: 124 -DPDCRLIGLHLYDGLFKVIPFDNKGQLKEA------FNIRLEEL--------------- 161
            DP  R   + +YD    V+PF     L  A       ++R   L               
Sbjct: 159 LDPHQRCAVMLVYDRHLAVLPFRRTEVLVSAETDPKHISVRNSLLWQQRATAPLLATFTT 218

Query: 162 -----------QVLDIKFLYGCAKPTIVVLYQD------NKDARHVKTYEVALK---DKD 201
                       VLD++FLYG  +PT++VLY+          AR      VAL     K 
Sbjct: 219 CLSTSTGEKINNVLDMQFLYGFYEPTLLVLYEPIGTWAGRVSARRDTCCIVALSFNLQKR 278

Query: 202 FVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVY-------------CSANAFKAI 248
                W Q +L      +I VP P+ GV+++   +I+Y             C A      
Sbjct: 279 TNPVIWFQESLPFDCRSVISVPQPIGGVVVMAANSILYLKQTLPSCGLPLNCYAQISTNF 338

Query: 249 PIRPSITKAYGRVDADGSR--------YLLGDHAGLLHLLVITHEK--EKVTGLKIELLG 298
           P+R  +    G +  DG R        +L+G  +G L+LL +  E+  + VT L    +G
Sbjct: 339 PMRQDVPSC-GPLSIDGCRVVTLNETQFLIGTRSGNLYLLSLWLEQATQTVTSLLFHKVG 397

Query: 299 ETSIASTISYLDNAVVYIGSSYGDSQLIKLN---LQPDAKGSYVE 340
                  +  L++  ++IGS + DS L+K++   L  DA G  V+
Sbjct: 398 HAVPPHCMVLLESKYLFIGSRFCDSVLMKIDYSLLCVDANGKEVD 442


>gi|326471884|gb|EGD95893.1| protein kinase subdomain-containing protein [Trichophyton tonsurans
            CBS 112818]
          Length = 1398

 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 24/308 (7%)

Query: 791  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 850
            V+PE ++P K +         KL+L A++E KGAV +L+   G+    + Q  +     L
Sbjct: 1094 VVPEPDQPEKSK---------KLKLFAKEEVKGAVTALSGIGGQGFLIVAQGQKCMVRGL 1144

Query: 851  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 910
            ++DG+    +      ++  L         ++GD  K +  + Y  E   ++   ++   
Sbjct: 1145 KEDGSLLPVAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFIGYSEEPYKLDLFGKENEN 1204

Query: 911  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 967
              +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +   
Sbjct: 1205 LAVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMT 1264

Query: 968  ---HGSLVMRLP----DSDVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 1016
               HG+     P      D   +P     ++     G I VI  L  + Y  L  LQ+ L
Sbjct: 1265 LLPHGAYTPSAPVDEDAMDTDSLPPSKYQILMTFQTGSIAVITPLSEDSYRRLLALQSQL 1324

Query: 1017 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 1076
               ++    LN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1325 VNALEHPCSLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1383

Query: 1077 LCKRVEEL 1084
            +   +E+L
Sbjct: 1384 IRTDLEKL 1391


>gi|390358537|ref|XP_001201130.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Strongylocentrotus purpuratus]
          Length = 283

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 51/225 (22%)

Query: 3   IWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLL-------------TPQG 49
           ++ +    H PT V H    +F SP + NL++AK + + ++ +              P+ 
Sbjct: 1   MYAFYREIHPPTGVEHCVYCHFFSPDQQNLVVAKGSELTVYSMITVDSNKPTDKDSKPKN 60

Query: 50  -LQPMLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVS 108
            L+      I+G++ +++  +  G  +D L ++    K  ++++D    +L T +M    
Sbjct: 61  KLEEAATFHIFGKVMSMQSAQVTGSGRDALLLSFMNAKVSIVEYDPNMHDLKTLSMHYFE 120

Query: 109 DRIGRPTDNGQIGI----------IDPDCRLIGLHLYDGLFKVIPF-------------- 144
           +      D  + G+          +DPD R   +  Y     V+PF              
Sbjct: 121 E------DETKEGVYRNIFHPVVKVDPDHRCAIMLTYGSKLVVLPFRRDGLVEDLDKSMS 174

Query: 145 --DNKGQLKEAFNIRLEEL-----QVLDIKFLYGCAKPTIVVLYQ 182
               +G L  ++ IRL E+      VLDI+FL+G  +PT+++LY+
Sbjct: 175 ASTRRGALMPSYVIRLNEMDDPICNVLDIQFLHGYYEPTLLILYE 219


>gi|255075065|ref|XP_002501207.1| predicted protein [Micromonas sp. RCC299]
 gi|226516471|gb|ACO62465.1| predicted protein [Micromonas sp. RCC299]
          Length = 1423

 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 143/353 (40%), Gaps = 59/353 (16%)

Query: 746  VRLLDDQTFEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPE-ENEPTK 800
            +RLL   T E    Y +D  E+  SI    L  + +        VGTA  LP  E+ P +
Sbjct: 1051 LRLLVPGTLECAWQYTVDPGEHVQSIRNVQLRNTMTGALQSMLVVGTA--LPGGEDAPCR 1108

Query: 801  GRILVFIV--------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 852
            GR+L+F V           + QL+  ++ K A  +L    G L  AI  K+ ++ W    
Sbjct: 1109 GRVLIFEVVWQMTDRGTKWQGQLVCVRDAKMACTALEGVGGHLAVAIGTKLIVHSW---- 1164

Query: 853  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH--EEGAIEERARDYNA 910
            DG   L         +  + +    +FI++GD+ K      +K   +E  + + A+D+  
Sbjct: 1165 DG-HSLMPVAFFDTPLHTVTMNVVKNFILLGDIQKGAFFFRWKDTPDEKLLVQMAKDFEG 1223

Query: 911  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN--- 964
              + A E L D   L     +   N F    + +     +  +L   G +H+G  V+   
Sbjct: 1224 MDILATEFLVDGSTLSMLTTDMTGNAFIFSYDPKSLESWKGQKLLTKGAFHVGSPVHRMV 1283

Query: 965  RFRHGSLVMRLPDSDVGQIPT------------VIFGTVNGVIGVIASLPHEQYLFLEKL 1012
            RFR     ++ P +  GQ  +            V FGT++G +G++  +    +  L+ L
Sbjct: 1284 RFR-----LKAPTAAPGQTISPAEQKAQANRHAVFFGTLDGSLGILVPIEEAAHASLQSL 1338

Query: 1013 QTNLRKVI--KGVGGLNHEQWRSFNNEKKTVDAK--------NFLDGDLIESF 1055
            Q  L        + GLN    R      KTV+ +        + LDG L+  +
Sbjct: 1339 QRYLTYATPHAALAGLNARTHR----HPKTVEGRPMRQPAPHSLLDGGLLAVY 1387


>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 1107

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 166/381 (43%), Gaps = 36/381 (9%)

Query: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 405
           +L PI+D       +Q    ++  S  Y    L+ V  GI   E  S  L      +++ 
Sbjct: 374 SLSPILD------AKQTPSNMLVLSSHY----LKQVTRGIPTTEIVSTPLPFTPTSVYTT 423

Query: 406 RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 465
           + +     D++LVV+    ++ L +++ + +EE       +   TL       + LVQV 
Sbjct: 424 KLTQASVHDSYLVVTSSLASQTLVLSIGEVVEEVPDSKLVTDQHTLSIQQMGKSSLVQVY 483

Query: 466 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI--GDGILTEV 523
           +  +R +         +W SP G +V  A+ NA+QV++A     +VY EI   D ++   
Sbjct: 484 TNGIRQIGHKV----TDWFSPAGITVTHASTNANQVIIAMSNCEVVYFEIDVDDQLIEYQ 539

Query: 524 KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR 583
           +  +L   I+ L I     + + S +A +G   D ++++ SL + + +  + L   +   
Sbjct: 540 QRLELTSSITSLAI-----SDTRSDVAVIGC-ADETIQVVSLAESDCLDVKSLQA-LSAN 592

Query: 584 SVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 643
           +  L   E   ++   + +G      L++K  +L D +   LG++P+++   S  +T  V
Sbjct: 593 ASSLVMIENTVHI--GMENGVYARTKLDIK--QLKDTRVQYLGSRPVSMSRISVGDTAGV 648

Query: 644 FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI---GTIDD 700
            A S    + Y+ +   +   +++ ++S    FNS      + I    EL I   GT D 
Sbjct: 649 LAISSSAWIGYTHDTWRIMPLLDI-DISSAASFNSEDIEGIVGI-HGNELVIFSLGTEDG 706

Query: 701 IQKLH---IRSIPLGEHPRRI 718
               H   I+   L   PRR+
Sbjct: 707 FDPSHEWTIKKSRLRYTPRRM 727


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.138    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,268,230,161
Number of Sequences: 23463169
Number of extensions: 761921976
Number of successful extensions: 1664742
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 606
Number of HSP's that attempted gapping in prelim test: 1655640
Number of HSP's gapped (non-prelim): 3339
length of query: 1088
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 934
effective length of database: 8,745,867,341
effective search space: 8168640096494
effective search space used: 8168640096494
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)